BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005278
(704 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/292 (35%), Positives = 154/292 (52%), Gaps = 13/292 (4%)
Query: 404 RTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECE 463
R +D++ ATN F+ L+G G FG VYKG L DG VA+K + + F++E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN---YFLGILERLNIMID 520
L RH +L+ +I C + L+ ++M NG+L++ LY + + +RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
L YLH + ++H D+K NILLDEN ++DFGISK E D + + + T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGT 204
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEM-SLKHWVKESLPDG- 638
+GY+ PEY +G ++ KSDVYS+G++L E + + EM +L W ES +G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690
L ++VD NL A ++ + L A+ C S E R SM D KL+
Sbjct: 265 LEQIVDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 13/292 (4%)
Query: 404 RTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECE 463
R +D++ ATN F+ L+G G FG VYKG L DG VA+K + + F++E E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN---YFLGILERLNIMID 520
L RH +L+ +I C + L+ ++M NG+L++ LY + + +RL I I
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
L YLH + ++H D+K NILLDEN ++DFGISK E + + + T
Sbjct: 148 AARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGT 204
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEM-SLKHWVKESLPDG- 638
+GY+ PEY +G ++ KSDVYS+G++L E + + EM +L W ES +G
Sbjct: 205 LGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQ 264
Query: 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690
L ++VD NL A ++ + L A+ C S E R SM D KL+
Sbjct: 265 LEQIVDPNL-----ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 102/304 (33%), Positives = 155/304 (50%), Gaps = 18/304 (5%)
Query: 397 LSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--- 453
+ L +R S ++Q A++ F+ N+LG G FG VYKG L DGT VA+K L+ ER
Sbjct: 20 VHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVK--RLKEERXQG 77
Query: 454 ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSH---NYFLG 510
F +E E++ HRNL+++ C + LV +M NGS+ L L
Sbjct: 78 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 137
Query: 511 ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
+R I + L YLH ++H D+K NILLDE A V DFG++KL+ D
Sbjct: 138 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 197
Query: 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG---EMSL 627
V + TIG++APEY S G S K+DV+ YG++L+E T ++ + + ++ L
Sbjct: 198 HVXXAVR-GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 256
Query: 628 KHWVKESLPD-GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
WVK L + L +VD +L + K + + ++ +AL C SP +R M +
Sbjct: 257 LDWVKGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
Query: 687 AKLK 690
L+
Sbjct: 312 RMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/304 (32%), Positives = 152/304 (50%), Gaps = 18/304 (5%)
Query: 397 LSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--- 453
+ L +R S ++Q A++ F N+LG G FG VYKG L DG VA+K L+ ER
Sbjct: 12 VHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVK--RLKEERTQG 69
Query: 454 ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSH---NYFLG 510
F +E E++ HRNL+++ C + LV +M NGS+ L L
Sbjct: 70 GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLD 129
Query: 511 ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
+R I + L YLH ++H D+K NILLDE A V DFG++KL+ D
Sbjct: 130 WPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX 189
Query: 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG---EMSL 627
V + IG++APEY S G S K+DV+ YG++L+E T ++ + + ++ L
Sbjct: 190 HVXXAVR-GXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVML 248
Query: 628 KHWVKESLPD-GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
WVK L + L +VD +L + K + + ++ +AL C SP +R M +
Sbjct: 249 LDWVKGLLKEKKLEALVDVDL-----QGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
Query: 687 AKLK 690
L+
Sbjct: 304 RMLE 307
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 177/394 (44%), Gaps = 62/394 (15%)
Query: 2 GYMLPNL--------KYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNL 53
G +LPNL + L L +N +G IP +++N S+L+ L LS N SG IP++ G+L
Sbjct: 379 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Query: 54 GSLQVLSLAYN-----------YLMT-ESSAAKWNFL-----SSLTNCRNLTVLGLASNP 96
L+ L L N Y+ T E+ +N L S L+NC NL + L++N
Sbjct: 439 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 498
Query: 97 LRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGR 156
L G +P IG +L GNIP E+G+ +I DLN NGTIP A+
Sbjct: 499 LTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF- 556
Query: 157 LRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSN 216
K G I + H L +R L N
Sbjct: 557 ------------KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--N 602
Query: 217 KLTSTMPSSFGSLEY-------------VLYINLSANSLNGSLPSNIQNLKVLTNLDLSR 263
+L++ P + S Y ++++++S N L+G +P I ++ L L+L
Sbjct: 603 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 662
Query: 264 NQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIP---- 319
N +SG IP +G L L L L+ N+ G +P++ +L L +DLS NNLSG IP
Sbjct: 663 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 722
Query: 320 -KNFSAQSFLSNYALCGPARLQVPSCRKYNSRGF 352
+ F FL+N LCG +P C N+ G+
Sbjct: 723 FETFPPAKFLNNPGLCG---YPLPRCDPSNADGY 753
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 159/346 (45%), Gaps = 35/346 (10%)
Query: 8 LKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLM 67
L++L + NKLSG +I+ ++L +L++SSN F G IP L SLQ LSLA N
Sbjct: 222 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 279
Query: 68 TESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIG-------------NFSASLQE 114
E +FLS C LT L L+ N G +PP G NFS L
Sbjct: 280 GEIP----DFLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 333
Query: 115 ---FYAYGCKL--------RGNIPQEIGNLSG-MIVFDLNGCDLNGTI-PTAVGRLRR-L 160
G K+ G +P+ + NLS ++ DL+ + +G I P + L
Sbjct: 334 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 393
Query: 161 QGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTS 220
Q LYL N G IP L + G +P L SL+ LR L L N L
Sbjct: 394 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 453
Query: 221 TMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENL 280
+P ++ + + L N L G +PS + N L + LS N+L+G+IP IG LENL
Sbjct: 454 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 513
Query: 281 ETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKNFSAQS 326
L L++N F G +P G SL LDL+ N +G IP QS
Sbjct: 514 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 559
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 35/298 (11%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNA-SKLIMLDLSSNSFSGLIPNTFG------------ 51
L +L+YL+L +NK +G IP+ ++ A L LDLS N F G +P FG
Sbjct: 265 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 324
Query: 52 -------------NLGSLQVLSLAYNYLMTESSAAKWNFLSSLTN-CRNLTVLGLASNPL 97
+ L+VL L++N E SLTN +L L L+SN
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGE-------LPESLTNLSASLLTLDLSSNNF 377
Query: 98 RG-ILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGR 156
G ILP L N +LQE Y G IP + N S ++ L+ L+GTIP+++G
Sbjct: 378 SGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS 437
Query: 157 LRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSN 216
L +L+ L L N L+G IP +L + G +P L++ T+L + L +N
Sbjct: 438 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 497
Query: 217 KLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTI 274
+LT +P G LE + + LS NS +G++P+ + + + L LDL+ N +G IP +
Sbjct: 498 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 140/330 (42%), Gaps = 64/330 (19%)
Query: 8 LKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLM 67
LK+L + NK+SG + ++ L LD+SSN+FS IP G+ +LQ L ++ N L
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 233
Query: 68 TESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIP 127
+ S A ++ C L +L ++SN G +PPL SLQ K G IP
Sbjct: 234 GDFSRA-------ISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIP 283
Query: 128 QEI-GNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXX 186
+ G + DL+G G +P G L+ L L N G +P D
Sbjct: 284 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD--------- 334
Query: 187 XXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSL 246
+L +R L + ++LS N +G L
Sbjct: 335 -----------------TLLKMRGLKV---------------------LDLSFNEFSGEL 356
Query: 247 PSNIQNLKV-LTNLDLSRNQLSGDI-PTTIGGLEN-LETLSLADNQFQGPVPKSFGSLIS 303
P ++ NL L LDLS N SG I P +N L+ L L +N F G +P + +
Sbjct: 357 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 416
Query: 304 LESLDLSRNNLSGEIPKNFSAQSFLSNYAL 333
L SL LS N LSG IP + + S L + L
Sbjct: 417 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 446
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 237 LSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIP--TTIGGLENLETLSLADNQFQGPV 294
LS + +NGS+ S + LT+LDLSRN LSG + T++G L+ L+++ N P
Sbjct: 81 LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 139
Query: 295 PKSFG-SLISLESLDLSRNNLSG 316
S G L SLE LDLS N++SG
Sbjct: 140 KVSGGLKLNSLEVLDLSANSISG 162
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/394 (30%), Positives = 177/394 (44%), Gaps = 62/394 (15%)
Query: 2 GYMLPNL--------KYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNL 53
G +LPNL + L L +N +G IP +++N S+L+ L LS N SG IP++ G+L
Sbjct: 382 GPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Query: 54 GSLQVLSLAYN-----------YLMT-ESSAAKWNFL-----SSLTNCRNLTVLGLASNP 96
L+ L L N Y+ T E+ +N L S L+NC NL + L++N
Sbjct: 442 SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR 501
Query: 97 LRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGR 156
L G +P IG +L GNIP E+G+ +I DLN NGTIP A+
Sbjct: 502 LTGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF- 559
Query: 157 LRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSN 216
K G I + H L +R L N
Sbjct: 560 ------------KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--N 605
Query: 217 KLTSTMPSSFGSLEY-------------VLYINLSANSLNGSLPSNIQNLKVLTNLDLSR 263
+L++ P + S Y ++++++S N L+G +P I ++ L L+L
Sbjct: 606 RLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGH 665
Query: 264 NQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIP---- 319
N +SG IP +G L L L L+ N+ G +P++ +L L +DLS NNLSG IP
Sbjct: 666 NDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQ 725
Query: 320 -KNFSAQSFLSNYALCGPARLQVPSCRKYNSRGF 352
+ F FL+N LCG +P C N+ G+
Sbjct: 726 FETFPPAKFLNNPGLCG---YPLPRCDPSNADGY 756
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 117/346 (33%), Positives = 159/346 (45%), Gaps = 35/346 (10%)
Query: 8 LKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLM 67
L++L + NKLSG +I+ ++L +L++SSN F G IP L SLQ LSLA N
Sbjct: 225 LQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFT 282
Query: 68 TESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIG-------------NFSASLQE 114
E +FLS C LT L L+ N G +PP G NFS L
Sbjct: 283 GEIP----DFLSGA--CDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPM 336
Query: 115 ---FYAYGCKL--------RGNIPQEIGNLSG-MIVFDLNGCDLNGTI-PTAVGRLRR-L 160
G K+ G +P+ + NLS ++ DL+ + +G I P + L
Sbjct: 337 DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTL 396
Query: 161 QGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTS 220
Q LYL N G IP L + G +P L SL+ LR L L N L
Sbjct: 397 QELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEG 456
Query: 221 TMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENL 280
+P ++ + + L N L G +PS + N L + LS N+L+G+IP IG LENL
Sbjct: 457 EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENL 516
Query: 281 ETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKNFSAQS 326
L L++N F G +P G SL LDL+ N +G IP QS
Sbjct: 517 AILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQS 562
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 145/298 (48%), Gaps = 35/298 (11%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNA-SKLIMLDLSSNSFSGLIPNTFG------------ 51
L +L+YL+L +NK +G IP+ ++ A L LDLS N F G +P FG
Sbjct: 268 LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSS 327
Query: 52 -------------NLGSLQVLSLAYNYLMTESSAAKWNFLSSLTN-CRNLTVLGLASNPL 97
+ L+VL L++N E SLTN +L L L+SN
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGE-------LPESLTNLSASLLTLDLSSNNF 380
Query: 98 RG-ILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGR 156
G ILP L N +LQE Y G IP + N S ++ L+ L+GTIP+++G
Sbjct: 381 SGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGS 440
Query: 157 LRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSN 216
L +L+ L L N L+G IP +L + G +P L++ T+L + L +N
Sbjct: 441 LSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNN 500
Query: 217 KLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTI 274
+LT +P G LE + + LS NS +G++P+ + + + L LDL+ N +G IP +
Sbjct: 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 140/330 (42%), Gaps = 64/330 (19%)
Query: 8 LKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLM 67
LK+L + NK+SG + ++ L LD+SSN+FS IP G+ +LQ L ++ N L
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIP-FLGDCSALQHLDISGNKLS 236
Query: 68 TESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIP 127
+ S A ++ C L +L ++SN G +PPL SLQ K G IP
Sbjct: 237 GDFSRA-------ISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIP 286
Query: 128 QEI-GNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXX 186
+ G + DL+G G +P G L+ L L N G +P D
Sbjct: 287 DFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD--------- 337
Query: 187 XXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSL 246
+L +R L + ++LS N +G L
Sbjct: 338 -----------------TLLKMRGLKV---------------------LDLSFNEFSGEL 359
Query: 247 PSNIQNLKV-LTNLDLSRNQLSGDI-PTTIGGLEN-LETLSLADNQFQGPVPKSFGSLIS 303
P ++ NL L LDLS N SG I P +N L+ L L +N F G +P + +
Sbjct: 360 PESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSE 419
Query: 304 LESLDLSRNNLSGEIPKNFSAQSFLSNYAL 333
L SL LS N LSG IP + + S L + L
Sbjct: 420 LVSLHLSFNYLSGTIPSSLGSLSKLRDLKL 449
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 237 LSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIP--TTIGGLENLETLSLADNQFQGPV 294
LS + +NGS+ S + LT+LDLSRN LSG + T++G L+ L+++ N P
Sbjct: 84 LSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPG 142
Query: 295 PKSFG-SLISLESLDLSRNNLSG 316
S G L SLE LDLS N++SG
Sbjct: 143 KVSGGLKLNSLEVLDLSANSISG 165
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 120/219 (54%), Gaps = 17/219 (7%)
Query: 406 SYLDIQRATNGFNE------CNLLGTGSFGSVYKGTLFDGTNVAIK----VFNLQLERAS 455
S+ +++ TN F+E N +G G FG VYKG + + T VA+K + ++ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 456 RSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERL 515
+ FD E +++ +H NL++++ + D LV +MPNGSL L + + +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 516 NIMIDVGLA--LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
I G A + +LH H +H D+K NILLDE TA +SDFG+++ + +V+
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ + T YMAPE G I+PKSD+YS+G++L+E T
Sbjct: 192 XSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 119/219 (54%), Gaps = 17/219 (7%)
Query: 406 SYLDIQRATNGFNE------CNLLGTGSFGSVYKGTLFDGTNVAIK----VFNLQLERAS 455
S+ +++ TN F+E N +G G FG VYKG + + T VA+K + ++ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 74
Query: 456 RSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERL 515
+ FD E +++ +H NL++++ + D LV +MPNGSL L + + +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 516 NIMIDVGLA--LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
I G A + +LH H +H D+K NILLDE TA +SDFG+++ + +V+
Sbjct: 135 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191
Query: 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ T YMAPE G I+PKSD+YS+G++L+E T
Sbjct: 192 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 118/219 (53%), Gaps = 17/219 (7%)
Query: 406 SYLDIQRATNGFNE------CNLLGTGSFGSVYKGTLFDGTNVAIK----VFNLQLERAS 455
S+ +++ TN F+E N +G G FG VYKG + + T VA+K + ++ E
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 68
Query: 456 RSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERL 515
+ FD E +++ +H NL++++ + D LV +MPNGSL L + + +
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 128
Query: 516 NIMIDVGLA--LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
I G A + +LH H +H D+K NILLDE TA +SDFG+++ + V+
Sbjct: 129 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVM 185
Query: 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ T YMAPE G I+PKSD+YS+G++L+E T
Sbjct: 186 XXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIIT 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 17/219 (7%)
Query: 406 SYLDIQRATNGFNE------CNLLGTGSFGSVYKGTLFDGTNVAIK----VFNLQLERAS 455
S+ +++ TN F+E N G G FG VYKG + + T VA+K + ++ E
Sbjct: 7 SFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELK 65
Query: 456 RSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF--LGILE 513
+ FD E ++ +H NL++++ + D LV + PNGSL L + L
Sbjct: 66 QQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHX 125
Query: 514 RLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
R I + +LH H +H D+K NILLDE TA +SDFG+++ + V
Sbjct: 126 RCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVX 182
Query: 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ + T Y APE G I+PKSD+YS+G++L+E T
Sbjct: 183 XSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIIT 220
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G GSFG+V++ + G++VA+K+ Q A R F E I++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER--LNIMIDVGLALEYLHHGHSTPMVH 538
++V E++ GSL + L+ + ER L++ DV + YLH+ + P+VH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVH 162
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DLK N+L+D+ T V DFG+S+L + + T +MAPE + + KS
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNEKS 220
Query: 599 DVYSYGILLMETFTRKKP 616
DVYS+G++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 108/198 (54%), Gaps = 8/198 (4%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G GSFG+V++ + G++VA+K+ Q A R F E I++ +RH N++ +
Sbjct: 45 IGAGSFGTVHRAE-WHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER--LNIMIDVGLALEYLHHGHSTPMVH 538
++V E++ GSL + L+ + ER L++ DV + YLH+ + P+VH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVH 162
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
+LK N+L+D+ T V DFG+S+L + + T +MAPE + + KS
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNEKS 220
Query: 599 DVYSYGILLMETFTRKKP 616
DVYS+G++L E T ++P
Sbjct: 221 DVYSFGVILWELATLQQP 238
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 135/292 (46%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++EF+P GSL ++L H + ++ L + +EYL +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 256
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 257 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 32/281 (11%)
Query: 421 NLLGTGSFGSVYKGTLFDGTN-----VAIKVFNLQLERASR-SFDSECEILRSIRHRNLI 474
++G G FG VYKG L + VAIK R F E I+ H N+I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNII 109
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
++ ++ E+M NG+L+K+L + +L+ + ++ + ++YL + +
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN-- 167
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEYGSEG 592
VH DL NIL++ N+ VSDFG+S++L E D T + I + APE S
Sbjct: 168 -YVHRDLAARNILVNSNLVCKVSDFGLSRVL-EDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 593 IISPKSDVYSYGILLMETFTR-KKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
+ SDV+S+GI++ E T ++P E+ H V +++ DG
Sbjct: 226 KFTSASDVWSFGIVMWEVMTYGERPYWEL------SNHEVMKAINDGFR----------- 268
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC +I L + C + +R D + L K+
Sbjct: 269 --LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 43/309 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 33 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 91
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 92 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 151
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 152 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 268
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 269 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 314
Query: 687 AKLKKIKEK 695
++ +I+++
Sbjct: 315 LRVDQIRDQ 323
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 38/293 (12%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 16 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 74
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 131
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 132 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 191
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 192 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 251
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695
D C I + +C + QR S +D A ++ +I+++
Sbjct: 252 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 290
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 271
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 272 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 36 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 94
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 151
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 152 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 211
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 212 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 271
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 272 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 1 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 59
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 60 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 119
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 120 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 236
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 237 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 282
Query: 687 AKLKKIKE 694
++ +I++
Sbjct: 283 LRVDQIRD 290
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 6 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 64
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 65 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 124
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 125 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 241
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 242 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 287
Query: 687 AKLKKIKE 694
++ +I++
Sbjct: 288 LRVDQIRD 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 25 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 83
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 140
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 141 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 200
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 201 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 260
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 261 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 298
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 5 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 63
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 64 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 123
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 124 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 240
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 241 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 286
Query: 687 AKLKKIKE 694
++ +I++
Sbjct: 287 LRVDQIRD 294
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 7 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 65
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 66 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 125
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 126 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 242
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 243 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 288
Query: 687 AKLKKIKE 694
++ +I++
Sbjct: 289 LRVDQIRD 296
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 139/308 (45%), Gaps = 43/308 (13%)
Query: 412 RATNGFNECNL-----LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDS 460
R F E +L LG G+FGSV + +D G VA+K E R F+
Sbjct: 2 RDPTQFEERHLKFLQQLGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER 60
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E EIL+S++H N++K C + + L++E++P GSL +L H + ++ L
Sbjct: 61 EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYT 120
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMT 577
+ +EYL + +H DL NIL++ + DFG++K+L + + ++
Sbjct: 121 SQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMS 626
+ I + APE +E S SDV+S+G++L E FT K P E G+M
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMI 237
Query: 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686
+ H ++ +G D C I + +C + QR S +D A
Sbjct: 238 VFHLIELLKNNGRLPRPDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLA 283
Query: 687 AKLKKIKE 694
++ +I++
Sbjct: 284 LRVDQIRD 291
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 193
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 253
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 254 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 135/292 (46%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 21 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 79
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L +H + ++ L + +EYL +
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTK 136
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 137 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 196
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 197 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 256
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 257 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 24 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 82
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 139
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 140 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESK 199
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 200 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 259
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 260 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 18 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 76
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 133
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H DL NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 134 RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESK 193
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 253
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 254 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 134/292 (45%), Gaps = 38/292 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FGSV + +D G VA+K E R F+ E EIL+S++H N++K
Sbjct: 19 LGKGNFGSV-EMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKY 77
Query: 477 ISNCCNIDFK--ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C + + L++E++P GSL +L H + ++ L + +EYL +
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTK 134
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGI 593
+H +L NIL++ + DFG++K+L + + ++ + I + APE +E
Sbjct: 135 RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESK 194
Query: 594 ISPKSDVYSYGILLMETFT----RKKPTNEIF-------IGEMSLKHWVKESLPDGLTEV 642
S SDV+S+G++L E FT K P E G+M + H ++ +G
Sbjct: 195 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR 254
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
D C I + +C + QR S +D A ++ +I++
Sbjct: 255 PDG--------------CPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 292
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 125/292 (42%), Gaps = 41/292 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF--------------LGILERLNIMIDVG 522
C +V E+M +G L ++L SH LG+ + L + V
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
+ YL H VH DL N L+ + + + DFG+S+ + D + T+ I
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642
+M PE + +SDV+S+G++L E FT K + W + S TE
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLS----NTEA 269
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
+D + + + C + + C P+QR S+KD A+L+ + +
Sbjct: 270 IDC--ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF--------------LGILERLNIMIDVG 522
C +V E+M +G L ++L SH LG+ + L + V
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
+ YL H VH DL N L+ + + + DFG+S+ + D + T+ I
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642
+M PE + +SDV+S+G++L E FT K + W + S + + +
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLSNTEAIDCI 244
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
+ +A C + + C P+QR S+KD A+L+ + +
Sbjct: 245 TQGRELERPRA------CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 290
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 125/283 (44%), Gaps = 42/283 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FG V+ + D VA+K A + F E E+L +++H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSH---------------NYFLGILERLNIMIDV 521
C + D +V E+M +G L K+L +H LG+ + L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
+ YL H VH DL N L+ N+ + DFG+S+ + D + T+ I
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTE 641
+M PE + +SDV+S+G++L E FT K + W + S TE
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGK------------QPWFQLS----NTE 243
Query: 642 VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKD 684
V++ + + + C + + L C P+QR+++K+
Sbjct: 244 VIEC--ITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKE 284
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 124/292 (42%), Gaps = 41/292 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FG V+ D VA+K E A + F E E+L ++H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF--------------LGILERLNIMIDVG 522
C +V E+M +G L ++L SH LG+ + L + V
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
+ YL H VH DL N L+ + + + DFG+S+ + D + T+ I
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642
+M PE + +SDV+S+G++L E FT K + W + S + + +
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGK------------QPWYQLSNTEAIDCI 250
Query: 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694
+ +A C + + C P+QR S+KD A+L+ + +
Sbjct: 251 TQGRELERPRA------CPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 296
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G+G G V G L VAIK ER R F SE I+ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L +H+ I++ + ++ VG + YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL N+L+D N+ VSDFG+S++L + D+ T I + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
S SDV+S+G+++ E GE +W +T + V E
Sbjct: 232 SSASDVWSFGVVMWEVLA---------YGER--PYW-------NMTNRDVISSVEEGYRL 273
Query: 655 SVKIDCLLSIMHLALDCCMESPEQR 679
+ C ++ L LDC + QR
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 101/202 (50%), Gaps = 9/202 (4%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAI-KVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G+GSFG+VYKG V I KV + E+ ++F +E +LR RH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF-QAFRNEVAVLRKTRHVNILLFMGYMT 102
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D A+V ++ SL K L+ + + ++I ++YLH + ++H D+
Sbjct: 103 K-DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDM 158
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPKS 598
K NNI L E +T + DFG++ + S ++ +MAPE S +S
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 599 DVYSYGILLMETFTRKKPTNEI 620
DVYSYGI+L E T + P + I
Sbjct: 219 DVYSYGIVLYELMTGELPYSHI 240
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 116/265 (43%), Gaps = 27/265 (10%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G+G G V G L VAIK ER R F SE I+ H N+I+
Sbjct: 55 KIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L +H+ I++ + ++ VG + YL
Sbjct: 115 LEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLG 171
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL N+L+D N+ VSDFG+S++L + D+ T I + APE +
Sbjct: 172 YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTF 231
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
S SDV+S+G+++ E GE +W +T + V E
Sbjct: 232 SSASDVWSFGVVMWEVLA---------YGER--PYW-------NMTNRDVISSVEEGYRL 273
Query: 655 SVKIDCLLSIMHLALDCCMESPEQR 679
+ C ++ L LDC + QR
Sbjct: 274 PAPMGCPHALHQLMLDCWHKDRAQR 298
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 19/209 (9%)
Query: 421 NLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQLERASR----SFDSECEILRSIRHRNLI 474
+LG G FGSV +G L DGT++ + V ++L+ +S+ F SE ++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 475 KIISNCCNIDFKAL-----VLEFMPNGSLEKWLYSHNYFLG-----ILERLNIMIDVGLA 524
+++ C + + + +L FM G L +L G + L M+D+ L
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
+EYL + + +H DL N +L ++MT V+DFG+SK + GD + + ++
Sbjct: 160 MEYLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 585 APEYGSEGIISPKSDVYSYGILLMETFTR 613
A E ++ + + KSDV+++G+ + E TR
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATR 245
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V+E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 130/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 332
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 333 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 389
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 448
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ G + V EV+D V +C
Sbjct: 449 SFGILLTELTTK---------GRVPYPGMVNR-------EVLDQ--VERGYRMPCPPECP 490
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 491 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 525
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 75 EPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 130
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 189
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 190 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 231
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 232 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 266
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---SVIHRDLA 130
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 112/249 (44%), Gaps = 34/249 (13%)
Query: 126 IPQEIGNLSGMIVFDLNGCD-LNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
IP + NL + + G + L G IP A+ +L +L LY+ + G+IP L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLY-INLSANSLN 243
G +PP ++SL +L + N+++ +P S+GS + + +S N L
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 244 GSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIG----------------------GL-ENL 280
G +P NL L +DLSRN L GD G GL +NL
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNL 246
Query: 281 ETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKN-----FSAQSFLSNYALCG 335
L L +N+ G +P+ L L SL++S NNL GEIP+ F ++ +N LCG
Sbjct: 247 NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCG 306
Query: 336 PARLQVPSC 344
+P+C
Sbjct: 307 SP---LPAC 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 107/257 (41%), Gaps = 39/257 (15%)
Query: 5 LPNLKYLTLFD----NKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLS 60
L NL YL N L G IP +I ++L L ++ + SG IP+ + +L L
Sbjct: 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131
Query: 61 LAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGC 120
+YN L S +SSL N +T G N + G +P G+FS
Sbjct: 132 FSYNAL----SGTLPPSISSLPNLVGITFDG---NRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 121 KLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCH 180
+L G IP NL+ + DL+ L G G + Q ++L N S+ +DL
Sbjct: 185 RLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN----SLAFDL-- 237
Query: 181 XXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSAN 240
G V +L L L +N++ T+P L+++ +N+S N
Sbjct: 238 ---------------GKV----GLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278
Query: 241 SLNGSLPS--NIQNLKV 255
+L G +P N+Q V
Sbjct: 279 NLCGEIPQGGNLQRFDV 295
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V+E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVIEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ IRH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 14/229 (6%)
Query: 420 CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNL---QLERASRSFDSECEILRSIRHRNLI 474
+ LG G +VY + T+ + VAIK + + E + F+ E + H+N++
Sbjct: 16 VDKLGGGGMSTVYLAEDTILN-IKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIV 74
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
+I D LV+E++ +L +++ SH L + +N + L+ + H H
Sbjct: 75 SMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINFTNQI---LDGIKHAHDM 130
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEYGSEGI 593
+VH D+KP NIL+D N T + DFGI+K L E S+ QT + T+ Y +PE
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET--SLTQTNHVLGTVQYFSPEQAKGEA 188
Query: 594 ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642
+D+YS GI+L E + P N +++KH +++S+P+ T+V
Sbjct: 189 TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH-IQDSVPNVTTDV 236
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 407
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 442
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 38/303 (12%)
Query: 406 SYLDIQRATNGFNE-----C----NLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQL--- 451
+Y D RA + F + C ++G G FG V G L +VA+ + L++
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 452 ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI 511
E+ R F E I+ H N++ + +V+EFM NG+L+ +L H+ +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
++ + ++ + + YL VH DL NIL++ N+ VSDFG+S+++ E D
Sbjct: 145 IQLVGMLRGIAAGMRYLA---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI-EDDPE 200
Query: 572 VIQTMTIATI--GYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH 629
+ T T I + APE + SDV+SYGI++ E + GE +
Sbjct: 201 AVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMS---------YGERP--Y 249
Query: 630 WVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689
W + +V+ A + E +DC + L LDC + +R + L
Sbjct: 250 WDMSN-----QDVIKA--IEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVGIL 302
Query: 690 KKI 692
K+
Sbjct: 303 DKM 305
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 250 EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 407
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 442
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 130
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 189
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 190 FGVLMWEVFSEGK 202
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 128
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 187
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 188 FGVLMWEVFSEGK 200
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 78 EPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 133
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 192
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 193 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 234
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 235 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 269
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 133
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 192
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 193 FGVLMWEVFSEGK 205
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 39/286 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRNLIKIISN 479
LG G FG V+ GT T VAIK N+ E +F E ++++ +RH L+++ +
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE----AFLQEAQVMKKLRHEKLVQLYA- 247
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVH 538
+ + +V E+M GSL +L +G RL ++D+ + + + VH
Sbjct: 248 VVSEEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL+ NIL+ EN+ V+DFG+ +L+ + + + Q I + APE G + KS
Sbjct: 305 RDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKS 363
Query: 599 DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658
DV+S+GILL E T+ + + EV+D V
Sbjct: 364 DVWSFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPP 405
Query: 659 DCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
+C S+ L C + PE+R + + A FL+D T++
Sbjct: 406 ECPESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 443
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 150
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 209
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 210 FGVLMWEVFSEGK 222
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 76 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 190
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 191 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 232
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 233 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 267
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 98
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 99 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 155
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 156 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 215
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 216 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 257
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 258 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 295
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 29/280 (10%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V +G L + VAIK ER R F SE I+ H N+I+
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N ++ EFM NG+L+ +L ++ +++ + ++ + + YL
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 138
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA---TIGYMAPEYGSEG 592
VH DL NIL++ N+ VSDFG+S+ L E +T ++ I + APE +
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652
+ SD +SYGI++ E + GE +W + +V++A + ++
Sbjct: 199 KFTSASDAWSYGIVMWEVMS---------FGERP--YWDMSN-----QDVINA--IEQDY 240
Query: 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
DC S+ L LDC + R + L K+
Sbjct: 241 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 280
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 72
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+ +V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 73 EEPIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 188
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 189 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 230
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 231 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 265
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 128/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+ +V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 84 EEPIYIVCEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 82 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 138
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 199 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 240
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 108
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 109 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 165
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 166 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 226 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 267
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 268 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 305
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 5/193 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G FG V+ G + VAIK + + F E E++ + H L+++ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
LV EFM +G L +L + L + +DV + YL ++H DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLA 131
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+ EN VSDFG+++ + + D T T + + +PE S S KSDV+S
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWS 190
Query: 603 YGILLMETFTRKK 615
+G+L+ E F+ K
Sbjct: 191 FGVLMWEVFSEGK 203
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 196
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 238
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 273
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 423 LGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIKIISNC 480
+G G+FG V+ G L D T VA+K L ++ F E IL+ H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+V+E + G +L + L + L ++ D +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ E +SDFG+S+ +G + + + + APE + G S +SDV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 601 YSYGILLMETFT 612
+S+GILL ETF+
Sbjct: 299 WSFGILLWETFS 310
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 249
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 250 EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDL 306
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 307 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 365
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 366 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 407
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 408 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 442
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G G FG V G + G VA+K ++ + +++F +E ++ +RH NL++++
Sbjct: 20 IGKGEFGDVMLGD-YRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG--VI 74
Query: 483 IDFKA---LVLEFMPNGSLEKWLYSHNY-FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
++ K +V E+M GSL +L S LG L +DV A+EYL + VH
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 131
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL N+L+ E+ A VSDFG++K + S Q + + APE E S KS
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREAAFSTKS 186
Query: 599 DVYSYGILLMETFT 612
DV+S+GILL E ++
Sbjct: 187 DVWSFGILLWEIYS 200
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 129/283 (45%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 80
Query: 483 IDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L +L + + +++ + + Y+ + VH DL
Sbjct: 81 EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN---YVHRDL 137
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 196
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 197 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 238
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 239 ESLHDLMCQCWRKEPEERPTFEYLQA--------FLEDYFTST 273
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V+E+M G L +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVMEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 95/192 (49%), Gaps = 5/192 (2%)
Query: 423 LGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIKIISNC 480
+G G+FG V+ G L D T VA+K L ++ F E IL+ H N++++I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+V+E + G +L + L + L ++ D +EYL S +H D
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRD 238
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ E +SDFG+S+ +G + + + + APE + G S +SDV
Sbjct: 239 LAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDV 298
Query: 601 YSYGILLMETFT 612
+S+GILL ETF+
Sbjct: 299 WSFGILLWETFS 310
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 122/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG++++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 125/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+V E+M GSL +L +G RL ++D+ + + + VH DL
Sbjct: 85 EPI-YIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G G FG V G + G VA+K ++ + +++F +E ++ +RH NL++++
Sbjct: 29 IGKGEFGDVMLGD-YRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG--VI 83
Query: 483 IDFKA---LVLEFMPNGSLEKWLYSHNY-FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
++ K +V E+M GSL +L S LG L +DV A+EYL + VH
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 140
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL N+L+ E+ A VSDFG++K + S Q + + APE E S KS
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 195
Query: 599 DVYSYGILLMETFT 612
DV+S+GILL E ++
Sbjct: 196 DVWSFGILLWEIYS 209
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 403 RRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDS 460
RR S D + +G+GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +LR RH N++ + A+V ++ SL L+ +++ ++I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
++YLH + ++H DLK NNI L E++T + DFG++ + S +
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 197
Query: 581 IGYMAPEY---GSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620
I +MAPE + S +SDVY++GI+L E T + P + I
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+ ++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 403 RRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDS 460
RR S D + +G+GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 80
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +LR RH N++ + A+V ++ SL L+ +++ ++I
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 139
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
++YLH + ++H DLK NNI L E++T + DFG++ + S +
Sbjct: 140 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGS 196
Query: 581 IGYMAPEY---GSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620
I +MAPE + S +SDVY++GI+L E T + P + I
Sbjct: 197 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 39/279 (13%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476
LG G+FG V+ + D VA+K + A + F E E+L +++H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL------------ERLNIMIDVGLA 524
C D +V E+M +G L K+L +H ++ + L+I +
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
+ YL H VH DL N L+ EN+ + DFG+S+ + D + T+ I +M
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 585 APEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644
PE + +SDV+S G++L E FT K + W + S + + +
Sbjct: 198 PPESIMYRKFTTESDVWSLGVVLWEIFTYGK------------QPWYQLSNNEVIECITQ 245
Query: 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683
+++ + C + L L C P R ++K
Sbjct: 246 GRVLQRPRT------CPQEVYELMLGCWQREPHMRKNIK 278
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 29/280 (10%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V +G L + VAIK ER R F SE I+ H N+I+
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N ++ EFM NG+L+ +L ++ +++ + ++ + + YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MS 136
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA---TIGYMAPEYGSEG 592
VH DL NIL++ N+ VSDFG+S+ L E T ++ I + APE +
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652
+ SD +SYGI++ E + GE +W + +V++A + ++
Sbjct: 197 KFTSASDAWSYGIVMWEVMS---------FGERP--YWDMSN-----QDVINA--IEQDY 238
Query: 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
DC S+ L LDC + R + L K+
Sbjct: 239 RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKM 278
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G G FG V G + G VA+K ++ + +++F +E ++ +RH NL++++
Sbjct: 14 IGKGEFGDVMLGD-YRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG--VI 68
Query: 483 IDFKA---LVLEFMPNGSLEKWLYSHNY-FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
++ K +V E+M GSL +L S LG L +DV A+EYL + VH
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 125
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL N+L+ E+ A VSDFG++K + S Q + + APE E S KS
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 180
Query: 599 DVYSYGILLMETFT 612
DV+S+GILL E ++
Sbjct: 181 DVWSFGILLWEIYS 194
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + +F E ++++ +RH L+++ + +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYA-VVS 83
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-LHHGHSTPMVHCDL 541
+ +V E+M G L +L +G RL ++D+ + + + VH DL
Sbjct: 84 EEPIYIVTEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ EN+ V+DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 199
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
S+GILL E T+ + + EV+D V +C
Sbjct: 200 SFGILLTELTTKGRVPYPGMVNR----------------EVLDQ--VERGYRMPCPPECP 241
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATTS 704
S+ L C + PE+R + + A FL+D T++
Sbjct: 242 ESLHDLMCQCWRKDPEERPTFEYLQA--------FLEDYFTST 276
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 110
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 111 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 167
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 168 AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 228 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 269
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 270 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L +VAIK + E+ R F E I+ H N+I+
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIR 81
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E M NGSL+ +L H+ +++ + ++ + ++YL
Sbjct: 82 LEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMG 138
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + +PE +
Sbjct: 139 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 198
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI+L E + E EMS + +K V E
Sbjct: 199 TSASDVWSYGIVLWEVMS----YGERPYWEMSNQDVIKA--------------VDEGYRL 240
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + + L K+
Sbjct: 241 PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 278
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 102/194 (52%), Gaps = 17/194 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G G FG V G + G VA+K ++ + +++F +E ++ +RH NL++++
Sbjct: 201 IGKGEFGDVMLGD-YRGNKVAVKC--IKNDATAQAFLAEASVMTQLRHSNLVQLLG--VI 255
Query: 483 IDFKA---LVLEFMPNGSLEKWLYSHNY-FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
++ K +V E+M GSL +L S LG L +DV A+EYL + VH
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVH 312
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL N+L+ E+ A VSDFG++K + S Q + + APE E S KS
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 367
Query: 599 DVYSYGILLMETFT 612
DV+S+GILL E ++
Sbjct: 368 DVWSFGILLWEIYS 381
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ + S +I +MAPE + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 79 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ + S +I +MAPE + S +
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 76 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ + S +I +MAPE + S +
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ + S +I +MAPE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 149
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 403 RRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDS 460
RR S D + +G+GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 73
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +LR RH N++ + A+V ++ SL L+ +++ ++I
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 132
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
++YLH + ++H DLK NNI L E++T + DFG++ S +
Sbjct: 133 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 189
Query: 581 IGYMAPEY---GSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620
I +MAPE + S +SDVY++GI+L E T + P + I
Sbjct: 190 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 103/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 74 TAPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ + S +I +MAPE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 11/223 (4%)
Query: 403 RRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDS 460
RR S D + +G+GSFG+VYKG +VA+K+ N+ + +F +
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKN 81
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +LR RH N++ + A+V ++ SL L+ +++ ++I
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQ 140
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
++YLH + ++H DLK NNI L E++T + DFG++ S +
Sbjct: 141 TAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGS 197
Query: 581 IGYMAPEY---GSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620
I +MAPE + S +SDVY++GI+L E T + P + I
Sbjct: 198 ILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V ++L +A++ E ++ S+ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 169
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 170 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 226
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 227 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 285
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L++ + + ++I ++YLH + ++H D
Sbjct: 78 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 133
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP---K 597
LK NNI L E+ T + DFG++ + S +I +MAPE +P +
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNI 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 130/283 (45%), Gaps = 30/283 (10%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNV----AIKVFNLQL-ERASRSFDSECEILRSIRH 470
+LG+G+FG+VYKG +G V AIK+ N +A+ F E I+ S+ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
+L++++ C + + LV + MP+G L ++++ H +G LN + + + YL
Sbjct: 100 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 158
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEYG 589
+VH DL N+L+ ++DFG+++LL EGD+ I +MA E
Sbjct: 159 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECI 214
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649
+ +SDV+SYG+ + E T F G+ DG+ +L+
Sbjct: 215 HYRKFTHQSDVWSYGVTIWELMT--------FGGKPY----------DGIPTREIPDLLE 256
Query: 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+ + C + + + + C M + R K+ AA+ ++
Sbjct: 257 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 299
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 53 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 169
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 170 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 227
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 228 LQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 150
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 33/268 (12%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK ++ R F SE I+ H N+I
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 476 ---IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+++ C + ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL
Sbjct: 95 LEGVVTKCKPV---MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMS 151
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSE 591
+ VH DL NIL++ N+ VSDFG+S++L + ++ T I + APE +
Sbjct: 152 A---VHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
+ SDV+SYGI++ E + GE +W + +V+ A + E
Sbjct: 209 RKFTSASDVWSYGIVMWEVMS---------YGERP--YWDMSN-----QDVIKA--IEEG 250
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR 679
+DC +++ L LDC + R
Sbjct: 251 YRLPPPMDCPIALHQLMLDCWQKERSDR 278
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 52 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 168
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 169 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 226
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 227 LQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 26 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 142
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 143 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 136
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 137 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 193
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 194 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L+ +++ ++I ++YLH + ++H D
Sbjct: 74 TKPQL-AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---GSEGIISPK 597
LK NNI L E++T + DFG++ S +I +MAPE + S +
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 148
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 206
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 33 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 149
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 150 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 31 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 147
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 148 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 205
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 206 LQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 33/282 (11%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK E+ R F SE I+ H N+I
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ ++ EFM NGSL+ +L ++ +++ + ++ + ++YL +
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 155
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA-----TIGYMAPEYGS 590
VH DL NIL++ N+ VSDFG+S+ L DD+ T T A I + APE
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 213
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650
+ SDV+SYGI++ E + GE +W +T N + +
Sbjct: 214 YRKFTSASDVWSYGIVMWEVMS---------YGERP--YW-------DMTNQDVINAIEQ 255
Query: 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+ +DC ++ L LDC + R L K+
Sbjct: 256 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 297
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 150
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 29 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V ++YL
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA- 145
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 146 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALES 203
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 204 LQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
++G G+FG V K + +VAIK + ER ++F E L + H N++K+ C
Sbjct: 15 EVVGRGAFGVVCKAK-WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 71
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNY--FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
N LV+E+ GSL L+ + ++ + + YLH ++H
Sbjct: 72 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 539 CDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
DLKP N+LL T + DFG + D T + +MAPE S K
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
DV+S+GI+L E TR+KP +EI
Sbjct: 185 CDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 95/203 (46%), Gaps = 13/203 (6%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
++G G+FG V K + +VAIK + ER ++F E L + H N++K+ C
Sbjct: 14 EVVGRGAFGVVCKAK-WRAKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGAC 70
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNY--FLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
N LV+E+ GSL L+ + ++ + + YLH ++H
Sbjct: 71 LNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 539 CDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
DLKP N+LL T + DFG + D T + +MAPE S K
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTA-----CDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
DV+S+GI+L E TR+KP +EI
Sbjct: 184 CDVFSWGIILWEVITRRKPFDEI 206
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 133/297 (44%), Gaps = 46/297 (15%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG G FG V +D TN VA+K RS + E +ILR++ H ++IK
Sbjct: 39 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIK 97
Query: 476 IISNCCNIDFKA---LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
CC A LV+E++P GSL +L H+ +G+ + L + + YLH H
Sbjct: 98 Y-KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH 154
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSE 591
+H DL N+LLD + + DFG++K + EG + ++ + + + APE E
Sbjct: 155 ---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKE 211
Query: 592 GIISPKSDVYSYGILLMETFT-----RKKPTN-----EIFIGEMSLKHWVKESLPDGLTE 641
SDV+S+G+ L E T + PT I G+M++ LTE
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---------LTE 262
Query: 642 VVD--ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696
+++ L R ++ C + HL +C R + ++ LK + EK+
Sbjct: 263 LLERGERLPRPDK-------CPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 312
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 33/268 (12%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK ++ R F SE I+ H N+I
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 476 ---IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+++ C + ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL
Sbjct: 74 LEGVVTKCKPV---MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--- 127
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSE 591
VH DL NIL++ N+ VSDFG+S++L + ++ T I + APE +
Sbjct: 128 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
+ SDV+SYGI++ E + GE +W + +V+ A + E
Sbjct: 188 RKFTSASDVWSYGIVMWEVMS---------YGERP--YWDMSN-----QDVIKA--IEEG 229
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR 679
+DC +++ L LDC + R
Sbjct: 230 YRLPPPMDCPIALHQLMLDCWQKERSDR 257
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 33/268 (12%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK ++ R F SE I+ H N+I
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 476 ---IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+++ C + ++ E+M NGSL+ +L ++ +++ + ++ +G ++YL
Sbjct: 80 LEGVVTKCKPV---MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLS--- 133
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSE 591
VH DL NIL++ N+ VSDFG+S++L + ++ T I + APE +
Sbjct: 134 DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
+ SDV+SYGI++ E + GE +W + +V+ A + E
Sbjct: 194 RKFTSASDVWSYGIVMWEVMS---------YGERP--YWDMSN-----QDVIKA--IEEG 235
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR 679
+DC +++ L LDC + R
Sbjct: 236 YRLPPPMDCPIALHQLMLDCWQKERSDR 263
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKI- 476
LG G+FGSV L D T + V LQ R F E +IL+++ ++K
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 477 -ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+S LV+E++P+G L +L H L L + +EYL S
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 131
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEYGSEGII 594
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+ I
Sbjct: 132 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIF 191
Query: 595 SPKSDVYSYGILLMETFT 612
S +SDV+S+G++L E FT
Sbjct: 192 SRQSDVWSFGVVLYELFT 209
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L++ + + ++I ++YLH + ++H D
Sbjct: 90 TKPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP---K 597
LK NNI L E+ T + DFG++ S +I +MAPE +P +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 32/284 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNV----AIKVFNLQL-ERASRSFDSECEILRSIRH 470
+LG+G+FG+VYKG +G V AIK+ N +A+ F E I+ S+ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
+L++++ C + + LV + MP+G L ++++ H +G LN + + + YL
Sbjct: 77 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEE 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT-MTIATIGYMAPEYG 589
+VH DL N+L+ ++DFG+++LL EGD+ I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKSPNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECI 191
Query: 590 SEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
+ +SDV+SYG+ + E T KP + I E +PD L+
Sbjct: 192 HYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE----------IPD---------LL 232
Query: 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+ + C + + + + C M + R K+ AA+ ++
Sbjct: 233 EKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRM 276
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 23/237 (9%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNL-------QLERASRSFDSECEI 464
A N +G G FG V+KG L D + VAIK L ++ + F E I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA 524
+ ++ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 525 LEYLHHGHSTPMVHCDLKPNNIL---LDEN--MTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+EY+ + + P+VH DL+ NI LDEN + A V+DFG+S+ + SV + +
Sbjct: 135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ---QSVHSV--SGLLG 188
Query: 580 TIGYMAPEY--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES 634
+MAPE E + K+D YS+ ++L T + P +E G++ + ++E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 151
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISK-LLGEGDDSVI-QTMTIATIGYMAPEY 588
S VH DL N +LDE T V+DFG+++ +L + DSV +T + +MA E
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALES 209
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 93 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 209
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 210 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 267
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 268 LQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 39 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 155
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 156 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 213
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 214 LQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKI- 476
LG G+FGSV L D T + V LQ R F E +IL+++ ++K
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 477 -ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+S LV+E++P+G L +L H L L + +EYL S
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 134
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEYGSEGII 594
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+ I
Sbjct: 135 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 194
Query: 595 SPKSDVYSYGILLMETFT 612
S +SDV+S+G++L E FT
Sbjct: 195 SRQSDVWSFGVVLYELFT 212
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKI- 476
LG G+FGSV L D T + V LQ R F E +IL+++ ++K
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 477 -ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+S LV+E++P+G L +L H L L + +EYL S
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 135
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEYGSEGII 594
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+ I
Sbjct: 136 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 195
Query: 595 SPKSDVYSYGILLMETFT 612
S +SDV+S+G++L E FT
Sbjct: 196 SRQSDVWSFGVVLYELFT 213
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 35 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 151
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 152 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 209
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 210 LQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 32 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 148
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 149 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 206
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 207 LQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 145
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 146 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 202
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 203 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 261
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 150
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-----RSFDSECEILRSIRHR 471
FNE ++G G FG VY GTL D I L R + F +E I++ H
Sbjct: 34 FNE--VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 472 NLIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++ ++ C + LV L +M +G L ++ + + + + + + V +++L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA- 150
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEY 588
S VH DL N +LDE T V+DFG+++ + + + + T A + +MA E
Sbjct: 151 --SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALES 208
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ KSDV+S+G+LL E TR P
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 141
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 142 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 198
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 199 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 257
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 98/198 (49%), Gaps = 11/198 (5%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKI- 476
LG G+FGSV L D T + V LQ R F E +IL+++ ++K
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 477 -ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+S LV+E++P+G L +L H L L + +EYL S
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRR 147
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPEYGSEGII 594
VH DL NIL++ ++DFG++KLL + D V++ + I + APE S+ I
Sbjct: 148 CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIF 207
Query: 595 SPKSDVYSYGILLMETFT 612
S +SDV+S+G++L E FT
Sbjct: 208 SRQSDVWSFGVVLYELFT 225
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 138
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 139 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 195
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 196 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 139
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 140 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 196
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 197 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 101/203 (49%), Gaps = 11/203 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR--SFDSECEILRSIRHRNLIKIISNC 480
+G+GSFG+VYKG +VA+K+ N+ + +F +E +LR RH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
A+V ++ SL L++ + + ++I ++YLH + ++H D
Sbjct: 90 TAPQL-AIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRD 145
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP---K 597
LK NNI L E+ T + DFG++ S +I +MAPE +P +
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
SDVY++GI+L E T + P + I
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNI 228
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 160
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 161 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 217
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 218 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 276
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 112/233 (48%), Gaps = 41/233 (17%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRS--IRHRNLIKIIS 478
L+G G +G+VYKG+L D VA+KVF+ ++F +E I R + H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIV 74
Query: 479 NCCNIDFKA-----LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH--- 530
+ LV+E+ PNGSL K+L H RL + GLA YLH
Sbjct: 75 GDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLA--YLHTELP 132
Query: 531 --GHSTPMV-HCDLKPNNILLDENMTAHVSDFGISKLL--------GEGDDSVIQTMTIA 579
H P + H DL N+L+ + T +SDFG+S L GE D++ I +
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAIS--EVG 190
Query: 580 TIGYMAPEYGSEGIIS--------PKSDVYSYGILLMETFTRKKPTNEIFIGE 624
TI YMAPE EG ++ + D+Y+ G++ E F R ++F GE
Sbjct: 191 TIRYMAPEV-LEGAVNLRDXESALKQVDMYALGLIYWEIFMR---CTDLFPGE 239
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNYLED 132
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 133 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 189
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 190 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 248
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 129
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 130 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 186
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 187 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 245
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 118/263 (44%), Gaps = 27/263 (10%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ GT T VAIK + SF E +I++ ++H L+++ + +
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYA-VVS 74
Query: 483 IDFKALVLEFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +V E+M GSL +L L + +++ V + Y+ + +H DL
Sbjct: 75 EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDL 131
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++DFG+++L+ + + + Q I + APE G + KSDV+
Sbjct: 132 RSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFP-IKWTAPEAALYGRFTIKSDVW 190
Query: 602 SYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP-DGLTEVVDANLVREEQAFSVKIDC 660
S+GILL E T+ + +P G+ V DC
Sbjct: 191 SFGILLTELVTKGR-------------------VPYPGMNNREVLEQVERGYRMPCPQDC 231
Query: 661 LLSIMHLALDCCMESPEQRVSMK 683
+S+ L + C + PE+R + +
Sbjct: 232 PISLHELMIHCWKKDPEERPTFE 254
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 116/237 (48%), Gaps = 23/237 (9%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNL-------QLERASRSFDSECEI 464
A N +G G FG V+KG L D + VAIK L ++ + F E I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA 524
+ ++ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 525 LEYLHHGHSTPMVHCDLKPNNIL---LDEN--MTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+EY+ + + P+VH DL+ NI LDEN + A V+DFG S+ + SV + +
Sbjct: 135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ---QSVHSV--SGLLG 188
Query: 580 TIGYMAPEY--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES 634
+MAPE E + K+D YS+ ++L T + P +E G++ + ++E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 89 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 144
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 145 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 203
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 204 SFGILLTEIVT 214
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 201 SFGILLTEIVT 211
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 87
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 88 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 143
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 144 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 202
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 203 SFGILLTEIVT 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 82 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 137
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 138 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 196
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 197 SFGILLTEIVT 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 81 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 136
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 137 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 195
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 196 SFGILLTEIVT 206
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 195 SFGILLTEIVT 205
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 112/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +L +G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+++ MP G L ++ H +G LN + + + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 86 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 141
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 142 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 200
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 201 SFGILLTEIVT 211
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK + E+ R F E I+ H N+I
Sbjct: 28 RVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ +V E+M NGSL+ +L ++ +++ + ++ + ++YL
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMG 144
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM-TIATIGYMAPEYGSEGII 594
VH DL NIL++ N+ VSDFG+S++L + ++ T I + APE +
Sbjct: 145 YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654
+ SDV+SYGI++ E + E EM+ + +K V E
Sbjct: 205 TSASDVWSYGIVMWEVVS----YGERPYWEMTNQDVIK--------------AVEEGYRL 246
Query: 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+DC ++ L LDC + R + L K+
Sbjct: 247 PSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKL 284
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 85 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 140
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 141 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 199
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 200 SFGILLTEIVT 210
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 137
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 138 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 195 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 194
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 195 SFGILLTEIVT 205
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 102/191 (53%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 90 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 145
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 146 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 204
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 205 SFGILLTEIVT 215
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +LG+G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG +KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 75 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 130
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 131 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 189
Query: 602 SYGILLMETFTRKK 615
S+GILL E T +
Sbjct: 190 SFGILLTEIVTHGR 203
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 25/274 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG+G FG V G +VA+K+ + + F E + + + H L+K C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
+V E++ NG L +L SH L + L + DV + +L S +H DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLA 131
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+D ++ VSDFG+++ + + D V T + + APE S KSDV++
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 603 YGILLMETFTRKKPTNEIFI-GEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661
+GIL+ E F+ K +++ E+ LK + G L R A D +
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNSEVVLK------VSQG------HRLYRPHLA----SDTI 234
Query: 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695
IM+ C E PE+R + + + ++ ++EK
Sbjct: 235 YQIMY---SCWHELPEKRPTFQQLLSSIEPLREK 265
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 44/296 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG G FG V +D TN VA+K RS + E +ILR++ H ++IK
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 476 IISNCCNIDFKAL--VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
C + K+L V+E++P GSL +L H+ +G+ + L + + YLH H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHSQH- 137
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
+H +L N+LLD + + DFG++K + EG + ++ + + + APE E
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 593 IISPKSDVYSYGILLMETFT-----RKKPTN-----EIFIGEMSLKHWVKESLPDGLTEV 642
SDV+S+G+ L E T + PT I G+M++ LTE+
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---------LTEL 246
Query: 643 VD--ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696
++ L R ++ C + HL +C R + ++ LK + EK+
Sbjct: 247 LERGERLPRPDK-------CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 44/296 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG G FG V +D TN VA+K RS + E +ILR++ H ++IK
Sbjct: 22 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIK 80
Query: 476 IISNCCNIDFKAL--VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
C + K+L V+E++P GSL +L H+ +G+ + L + + YLH H
Sbjct: 81 YKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS--IGLAQLLLFAQQICEGMAYLHAQH- 137
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
+H +L N+LLD + + DFG++K + EG + ++ + + + APE E
Sbjct: 138 --YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 593 IISPKSDVYSYGILLMETFT-----RKKPTN-----EIFIGEMSLKHWVKESLPDGLTEV 642
SDV+S+G+ L E T + PT I G+M++ LTE+
Sbjct: 196 KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR---------LTEL 246
Query: 643 VD--ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696
++ L R ++ C + HL +C R + ++ LK + EK+
Sbjct: 247 LERGERLPRPDK-------CPCEVYHLMKNCWETEASFRPTFENLIPILKTVHEKY 295
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G FG VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 19 LGGGQFGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 120/282 (42%), Gaps = 33/282 (11%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTN---VAIKVFNL-QLERASRSFDSECEILRSIRHRNLIK 475
++G G FG V G L G VAIK E+ R F SE I+ H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ ++ EFM NGSL+ +L ++ +++ + ++ + ++YL +
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMN--- 129
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA-----TIGYMAPEYGS 590
VH L NIL++ N+ VSDFG+S+ L DD+ T T A I + APE
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDFGLSRFL--EDDTSDPTYTSALGGKIPIRWTAPEAIQ 187
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650
+ SDV+SYGI++ E + GE +W +T N + +
Sbjct: 188 YRKFTSASDVWSYGIVMWEVMS---------YGERP--YW-------DMTNQDVINAIEQ 229
Query: 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+ +DC ++ L LDC + R L K+
Sbjct: 230 DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKM 271
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 23/237 (9%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNL-------QLERASRSFDSECEI 464
A N +G G FG V+KG L D + VAIK L ++ + F E I
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA 524
+ ++ H N++K+ N +V+EF+P G L L + + +L +M+D+ L
Sbjct: 77 MSNLNHPNIVKLYGLMHNP--PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134
Query: 525 LEYLHHGHSTPMVHCDLKPNNIL---LDEN--MTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+EY+ + + P+VH DL+ NI LDEN + A V+DF +S+ + SV + +
Sbjct: 135 IEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ---QSVHSV--SGLLG 188
Query: 580 TIGYMAPEY--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES 634
+MAPE E + K+D YS+ ++L T + P +E G++ + ++E
Sbjct: 189 NFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE 245
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +L +G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 142
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 143 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 199
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 200 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 22 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+++EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 19 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+++EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-----RASRSFDSECEILRSIRH 470
F + +L +G+FG+VYKG +G V I V +L +A++ E ++ S+ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
++ +++ C + L+ + MP G L ++ H +G LN + + + YL
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED 135
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG++KLLG + I +MA E
Sbjct: 136 RR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESIL 192
Query: 591 EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
I + +SDV+SYG+ + E T KP + I E+S E LP +D ++
Sbjct: 193 HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLD-DEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 113/284 (39%), Gaps = 37/284 (13%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVF----NLQLERASRSFDSECEILRSIRHRNLIKI 476
++G G FG VY+ + G VA+K + + + + E ++ ++H N+I +
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
C LV+EF G L + L IL +N + + + YLH P+
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL--VNWAVQIARGMNYLHDEAIVPI 129
Query: 537 VHCDLKPNNILLDE--------NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
+H DLK +NIL+ + N ++DFG+++ + +MAPE
Sbjct: 130 IHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW----HRTTKMSAAGAYAWMAPEV 185
Query: 589 GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648
+ S SDV+SYG+LL E T + P I DGL V +
Sbjct: 186 IRASMFSKGSDVWSYGVLLWELLTGEVPFRGI----------------DGLA--VAYGVA 227
Query: 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692
+ A + C L DC P R S + +L I
Sbjct: 228 MNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+++EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+++EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 97/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+++EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERAS--RSFDSECE---ILRSIRH 470
+ +LG+G FG+V+KG +G ++ I V +E S +SF + + + S+ H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH- 529
++++++ C + LV +++P GSL + H LG LN + + + YL
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 133
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
HG MVH +L N+LL V+DFG++ LL D ++ + I +MA E
Sbjct: 134 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 189
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
G + +SDV+SYG+ + E T
Sbjct: 190 HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 12/203 (5%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERAS--RSFDSECE---ILRSIRH 470
+ +LG+G FG+V+KG +G ++ I V +E S +SF + + + S+ H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH- 529
++++++ C + LV +++P GSL + H LG LN + + + YL
Sbjct: 93 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE 151
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
HG MVH +L N+LL V+DFG++ LL D ++ + I +MA E
Sbjct: 152 HG----MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESI 207
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
G + +SDV+SYG+ + E T
Sbjct: 208 HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 147
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 148 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 206
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 207 FGVLMWEIYSLGKMPYERFTNSETAEH 233
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 40 LGGGQYGEVYVG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+V E+MP G+L +L N + + L + + A+EYL + +H D
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKN---FIHRD 155
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 156 LAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDV 214
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 215 WAFGVLLWEIAT 226
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H +L
Sbjct: 76 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRNL 131
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ E ++ + I + APE + G + KSDV+
Sbjct: 132 RAANILVSDTLSCKIADFGLARLI-EDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVW 190
Query: 602 SYGILLMETFTRKK 615
S+GILL E T +
Sbjct: 191 SFGILLTEIVTHGR 204
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 120/291 (41%), Gaps = 38/291 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 132
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + E +IG + + + +E
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQ--------------ILHKIDKEG 235
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKDAAAKLKKIKEKFLDD 699
+ DC I ++ + C PE R V+++D + + + L D
Sbjct: 236 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRALQD 286
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 25 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 140
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 200 WAFGVLLWEIAT 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 101/191 (52%), Gaps = 7/191 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G G V+ G T VA+K Q + +F +E +++ ++H+ L+++ +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDL 541
++ E+M NGSL +L + + GI +N ++D+ + E + +H DL
Sbjct: 80 EPI-YIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ NIL+ + ++ ++DFG+++L+ + + + + I + APE + G + KSDV+
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFP-IKWTAPEAINYGTFTIKSDVW 194
Query: 602 SYGILLMETFT 612
S+GILL E T
Sbjct: 195 SFGILLTEIVT 205
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 138
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD-SVIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + G L KE L R E
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE 248
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
DC I ++ + C PE R V+++D
Sbjct: 249 -------DCPQDIYNVMVQCWAHKPEDRPTFVALRD 277
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 131
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 132 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 190
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 191 FGVLMWEIYSLGKMPYERFTNSETAEH 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 138
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 139 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 197
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 198 FGVLMWEIYSLGKMPYERFTNSETAEH 224
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 127
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 128 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWA 186
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 187 FGVLMWEIYSLGKMPYERFTNSETAEH 213
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 26 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 201 WAFGVLLWEIAT 212
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 26 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 138
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 139 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 198
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + G L KE L R E
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE 248
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
DC I ++ + C PE R V+++D
Sbjct: 249 -------DCPQDIYNVMVQCWAHKPEDRPTFVALRD 277
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G + T VA+K + ++F E ++++++H L+++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERL-NIMIDVGLALEYLHHGHSTPMVHCDL 541
+ ++ E+M GSL +L S +L +L + + + Y+ + +H DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ N+L+ E++ ++DFG+++++ E ++ + I + APE + G + KSDV+
Sbjct: 137 RAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 602 SYGILLMETFTRKK 615
S+GILL E T K
Sbjct: 196 SFGILLYEIVTYGK 209
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 34 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 149
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 208
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 209 WAFGVLLWEIAT 220
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 98/207 (47%), Gaps = 5/207 (2%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LGTG FG V G +VAIK+ + + F E +++ ++ H L+++ C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ E+M NG L +L + + L + DV A+EYL S +H DL
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQFLHRDLA 132
Query: 543 PNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYS 602
N L+++ VSDFG+S+ + + D+ + + + PE S KSD+++
Sbjct: 133 ARNCLVNDQGVVKVSDFGLSRYVLD-DEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWA 191
Query: 603 YGILLMETFTRKKPTNEIFIGEMSLKH 629
+G+L+ E ++ K E F + +H
Sbjct: 192 FGVLMWEIYSLGKMPYERFTNSETAEH 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 20 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 132
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 133 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + G L KE L R E
Sbjct: 193 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE 242
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
DC I ++ + C PE R V+++D
Sbjct: 243 -------DCPQDIYNVMVQCWAHKPEDRPTFVALRD 271
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 19 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 194 WAFGVLLWEIAT 205
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 21 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 196 WAFGVLLWEIAT 207
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 22 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 197 WAFGVLLWEIAT 208
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 115/276 (41%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 128
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD-SVIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + E +IG + + + +E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQ--------------ILHKIDKEG 231
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
+ DC I ++ + C PE R V+++D
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 115/276 (41%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 128
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + E +IG + + + +E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQ---EPWIGLNGSQ--------------ILHKIDKEG 231
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
+ DC I ++ + C PE R V+++D
Sbjct: 232 ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 19/240 (7%)
Query: 386 RSTKDGDQE-DLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVA 443
RST++GD E DLL D + NG + +LG G++G VY G L + +A
Sbjct: 3 RSTEEGDCESDLLEY---------DYEYDENG--DRVVLGKGTYGIVYAGRDLSNQVRIA 51
Query: 444 IKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
IK + R S+ E + + ++H+N+++ + + F + +E +P GSL L
Sbjct: 52 IKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 111
Query: 504 SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGIS 562
S L E+ I LE L + H +VH D+K +N+L++ + +SDFG S
Sbjct: 112 SKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTS 170
Query: 563 KLLGEGDDSVIQTMTIATIGYMAPEYGSEGI--ISPKSDVYSYGILLMETFTRKKPTNEI 620
K L G + +T T T+ YMAPE +G +D++S G ++E T K P E+
Sbjct: 171 KRLA-GINPCTETFT-GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 112/276 (40%), Gaps = 38/276 (13%)
Query: 423 LGTGSFGSVYKGTLFDG-----TNVAIKVFN---LQLERASRSFDSECEILRSIRHRNLI 474
LG GSFG V +G +D +VA+K L A F E + S+ HRNLI
Sbjct: 16 LGDGSFGVVRRGE-WDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGH 532
++ K +V E P GSL L H ++ LG L R + + G+ YL
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG--YLE--- 128
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE 591
S +H DL N+LL + DFG+ + L + DD V+Q + APE
Sbjct: 129 SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651
S SD + +G+ L E FT + G L KE L R E
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEG----------ERLPRPE 238
Query: 652 QAFSVKIDCLLSIMHLALDCCMESPEQR---VSMKD 684
DC I ++ + C PE R V+++D
Sbjct: 239 -------DCPQDIYNVMVQCWAHKPEDRPTFVALRD 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 101/194 (52%), Gaps = 6/194 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V+ G + T VA+K + ++F E ++++++H L+++ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERL-NIMIDVGLALEYLHHGHSTPMVHCDL 541
+ ++ EFM GSL +L S +L +L + + + Y+ + +H DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
+ N+L+ E++ ++DFG+++++ E ++ + I + APE + G + KS+V+
Sbjct: 136 RAANVLVSESLMCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 602 SYGILLMETFTRKK 615
S+GILL E T K
Sbjct: 195 SFGILLYEIVTYGK 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 23 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 198 WAFGVLLWEIAT 209
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 423 LGTGSFGSVYKGTLF---DGTNVAIKVFNLQLERA-SRSFDSECEILRSIRHRNLIKIIS 478
LG G+FGSV +G +VAIKV E+A + E +I+ + + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI- 76
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
C + LV+E G L K+L + + ++ V + ++YL + VH
Sbjct: 77 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVH 133
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEYGSEGIISP 596
DL N+LL A +SDFG+SK LG DDS + + + APE + S
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFSS 192
Query: 597 KSDVYSYGILLMETFTR-KKPTNEI 620
+SDV+SYG+ + E + +KP ++
Sbjct: 193 RSDVWSYGVTMWEALSYGQKPYKKM 217
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 228 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRN 343
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 403 WAFGVLLWEIAT 414
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRNLIKIISN 479
LG G FG V+ T T VA+K ++ +E +F +E ++++++H L+K+ +
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVKLHAV 78
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVH 538
++ EFM GSL +L S G + L +ID + E + +H
Sbjct: 79 VTKEPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 134
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL+ NIL+ ++ ++DFG+++++ E ++ + I + APE + G + KS
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 193
Query: 599 DVYSYGILLMETFT 612
DV+S+GILLME T
Sbjct: 194 DVWSFGILLMEIVT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 267 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 382
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 442 WAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNCC 481
LG G +G VY+G ++ ++ + V L+ + F E +++ I+H NL++++ C
Sbjct: 225 LGGGQYGEVYEG-VWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
++ EFM G+L +L N + + L + + A+EYL + +H +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 340
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
L N L+ EN V+DFG+S+L+ GD I + APE + S KSDV
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 601 YSYGILLMETFT 612
+++G+LL E T
Sbjct: 400 WAFGVLLWEIAT 411
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRNLIKIISN 479
LG G FG V+ T T VA+K ++ +E +F +E ++++++H L+K+ +
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVKLHAV 251
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVH 538
++ EFM GSL +L S G + L +ID + E + +H
Sbjct: 252 VTKEPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 307
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL+ NIL+ ++ ++DFG+++++ E ++ + I + APE + G + KS
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVI-EDNEYTAREGAKFPIKWTAPEAINFGSFTIKS 366
Query: 599 DVYSYGILLMETFT 612
DV+S+GILLME T
Sbjct: 367 DVWSFGILLMEIVT 380
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG G FG V +D TN VA+K RS + E EILR++ H +++K
Sbjct: 17 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 75
Query: 476 IISNCCNIDFKA--LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
C + K+ LV+E++P GSL +L H +G+ + L + + YLH H
Sbjct: 76 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQLLLFAQQICEGMAYLHAQH- 132
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
+H L N+LLD + + DFG++K + EG + ++ + + + APE E
Sbjct: 133 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 593 IISPKSDVYSYGILLMETFT 612
SDV+S+G+ L E T
Sbjct: 191 KFYYASDVWSFGVTLYELLT 210
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 97/200 (48%), Gaps = 16/200 (8%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG G FG V +D TN VA+K RS + E EILR++ H +++K
Sbjct: 16 LGEGHFGKV-SLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVK 74
Query: 476 IISNCCNIDFKA--LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
C + K+ LV+E++P GSL +L H +G+ + L + + YLH H
Sbjct: 75 YKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC--VGLAQLLLFAQQICEGMAYLHAQH- 131
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
+H L N+LLD + + DFG++K + EG + ++ + + + APE E
Sbjct: 132 --YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 593 IISPKSDVYSYGILLMETFT 612
SDV+S+G+ L E T
Sbjct: 190 KFYYASDVWSFGVTLYELLT 209
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 423 LGTGSFGSVYKGTLF---DGTNVAIKVFNLQLERA-SRSFDSECEILRSIRHRNLIKIIS 478
LG G+FGSV +G +VAIKV E+A + E +I+ + + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLI- 402
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
C + LV+E G L K+L + + ++ V + ++YL + VH
Sbjct: 403 GVCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN---FVH 459
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEYGSEGIISP 596
+L N+LL A +SDFG+SK LG DDS + + + APE + S
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALG-ADDSYYTARSAGKWPLKWYAPECINFRKFSS 518
Query: 597 KSDVYSYGILLMETFTR-KKPTNEI 620
+SDV+SYG+ + E + +KP ++
Sbjct: 519 RSDVWSYGVTMWEALSYGQKPYKKM 543
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 421 NLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI------RHRNL 473
+ LG G+FG V G G VA+K+ N Q RS D +I R I RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
IK+ +V+E++ G L ++ H G +E + L + + H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHR 129
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
+VH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S +
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRTSCGSPNYAAPEVISGRL 186
Query: 594 IS-PKSDVYSYGILL 607
+ P+ D++S G++L
Sbjct: 187 YAGPEVDIWSCGVIL 201
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 123/309 (39%), Gaps = 69/309 (22%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERAS----RSFDSECEILRSIRHRN 472
LG G FG V K T F T VA+K+ E AS R SE +L+ + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGIL---------------ERLN 516
+IK+ C L++E+ GSL +L S G L ER
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 517 IMID-------VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569
M D + ++YL +VH DL NIL+ E +SDFG+S+ + E D
Sbjct: 148 TMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIG 623
V ++ + +MA E + I + +SDV+S+G+LL E T P +F
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF-- 262
Query: 624 EMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683
NL++ +C + L L C + P++R
Sbjct: 263 ----------------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
Query: 684 DAAAKLKKI 692
D + L+K+
Sbjct: 301 DISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 123/309 (39%), Gaps = 69/309 (22%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERAS----RSFDSECEILRSIRHRN 472
LG G FG V K T F T VA+K+ E AS R SE +L+ + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGIL---------------ERLN 516
+IK+ C L++E+ GSL +L S G L ER
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 517 IMID-------VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569
M D + ++YL +VH DL NIL+ E +SDFG+S+ + E D
Sbjct: 148 TMGDLISFAWQISQGMQYLAE---MSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIG 623
V ++ + +MA E + I + +SDV+S+G+LL E T P +F
Sbjct: 205 SXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF-- 262
Query: 624 EMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683
NL++ +C + L L C + P++R
Sbjct: 263 ----------------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
Query: 684 DAAAKLKKI 692
D + L+K+
Sbjct: 301 DISKDLEKM 309
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 123/309 (39%), Gaps = 69/309 (22%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERAS----RSFDSECEILRSIRHRN 472
LG G FG V K T F T VA+K+ E AS R SE +L+ + H +
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK---ENASPSELRDLLSEFNVLKQVNHPH 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGIL---------------ERLN 516
+IK+ C L++E+ GSL +L S G L ER
Sbjct: 88 VIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERAL 147
Query: 517 IMID-------VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569
M D + ++YL +VH DL NIL+ E +SDFG+S+ + E D
Sbjct: 148 TMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED 204
Query: 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIG 623
V ++ + +MA E + I + +SDV+S+G+LL E T P +F
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLF-- 262
Query: 624 EMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683
NL++ +C + L L C + P++R
Sbjct: 263 ----------------------NLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFA 300
Query: 684 DAAAKLKKI 692
D + L+K+
Sbjct: 301 DISKDLEKM 309
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 96/195 (49%), Gaps = 18/195 (9%)
Query: 421 NLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI------RHRNL 473
+ LG G+FG V G G VA+K+ N Q RS D +I R I RH ++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQ---KIRSLDVVGKIKREIQNLKLFRHPHI 73
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
IK+ +V+E++ G L ++ H G +E + L + + H
Sbjct: 74 IKLYQVISTPTDFFMVMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHR 129
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
+VH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S +
Sbjct: 130 HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRDSCGSPNYAAPEVISGRL 186
Query: 594 IS-PKSDVYSYGILL 607
+ P+ D++S G++L
Sbjct: 187 YAGPEVDIWSCGVIL 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ + H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ + H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 43/290 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG FG VYKG LF VAIK + E R F E + ++H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------------LGILERLNIMID 520
++ +++ + +G L ++L + L + ++++
Sbjct: 77 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 136
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
+ +EYL H +VH DL N+L+ + + +SD G+ + + D + ++
Sbjct: 137 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
I +MAPE G S SD++SYG++L E F+ L+ + S D
Sbjct: 194 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YGLQPYCGYSNQD--- 238
Query: 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690
VV+ ++R Q DC + L ++C E P +R KD ++L+
Sbjct: 239 -VVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 285
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 123/290 (42%), Gaps = 43/290 (14%)
Query: 423 LGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
LG FG VYKG LF VAIK + E R F E + ++H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------------LGILERLNIMID 520
++ +++ + +G L ++L + L + ++++
Sbjct: 94 LLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQ 153
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
+ +EYL H +VH DL N+L+ + + +SD G+ + + D + ++
Sbjct: 154 IAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
I +MAPE G S SD++SYG++L E F+ L+ + S D
Sbjct: 211 IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS------------YGLQPYCGYSNQD--- 255
Query: 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690
VV+ ++R Q DC + L ++C E P +R KD ++L+
Sbjct: 256 -VVE--MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLR 302
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERAS----RSFDSECEILRSI-RHRNLI 474
+++G G+FG V K + DG + + ++ E AS R F E E+L + H N+I
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------------LGILERLNIMI 519
++ C + + L +E+ P+G+L +L L + L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
DV ++YL +H DL NIL+ EN A ++DFG+S+ G+ + V +TM
Sbjct: 140 DVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRL 193
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDG 638
+ +MA E + + + SDV+SYG+LL E + P + E+ E LP G
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKLPQG 247
Query: 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLD 698
R E+ ++C + L C E P +R S L ++ E+
Sbjct: 248 Y---------RLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 294
Query: 699 DVATT 703
V TT
Sbjct: 295 YVNTT 299
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 133/305 (43%), Gaps = 48/305 (15%)
Query: 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERAS----RSFDSECEILRSI-RHRNLI 474
+++G G+FG V K + DG + + ++ E AS R F E E+L + H N+I
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------------LGILERLNIMI 519
++ C + + L +E+ P+G+L +L L + L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
DV ++YL +H DL NIL+ EN A ++DFG+S+ G+ + V +TM
Sbjct: 150 DVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRL 203
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDG 638
+ +MA E + + + SDV+SYG+LL E + P + E+ E LP G
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELY------EKLPQG 257
Query: 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLD 698
R E+ ++C + L C E P +R S L ++ E+
Sbjct: 258 Y---------RLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKT 304
Query: 699 DVATT 703
V TT
Sbjct: 305 YVNTT 309
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIKI---- 476
LGTG FG V + D G VAIK +L +R + E +I++ + H N++
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 477 --ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER--LNIMIDVGLALEYLHHGH 532
+ D L +E+ G L K+L G+ E ++ D+ AL YLH
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 533 STPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
++H DLKP NI+L + + + D G +K L +G+ + T + T+ Y+APE
Sbjct: 142 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELL 195
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKP 616
+ + D +S+G L E T +P
Sbjct: 196 EQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 19/207 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIKI---- 476
LGTG FG V + D G VAIK +L +R + E +I++ + H N++
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 477 --ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER--LNIMIDVGLALEYLHHGH 532
+ D L +E+ G L K+L G+ E ++ D+ AL YLH
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 533 STPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
++H DLKP NI+L + + + D G +K L +G+ + T + T+ Y+APE
Sbjct: 143 ---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE---LCTEFVGTLQYLAPELL 196
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKP 616
+ + D +S+G L E T +P
Sbjct: 197 EQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 118/276 (42%), Gaps = 35/276 (12%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISN 479
+LG G FG K T + V + ++ E R+F E +++R + H N++K I
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539
+ E++ G+L + S + +R++ D+ + YLH S ++H
Sbjct: 76 LYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHR 132
Query: 540 DLKPNNILLDENMTAHVSDFGISKLL------GEG------DDSVIQTMTIATIGYMAPE 587
DL +N L+ EN V+DFG+++L+ EG D + + +MAPE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647
+ K DV+S+GI+L E IG ++ + PD L +D L
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCE-----------IIGRVN-------ADPDYLPRTMDFGL 234
Query: 648 -VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSM 682
VR +C S + + CC PE+R S
Sbjct: 235 NVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSF 270
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 206
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 207 EAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 221
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 222 EAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 231
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 232 EAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 255
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 256 EAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 241
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 242 EAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 215
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 102/203 (50%), Gaps = 7/203 (3%)
Query: 422 LLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
+LG G++G VY G L + +AIK + R S+ E + + ++H+N+++ + +
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
F + +E +P GSL L S L E+ I LE L + H +VH D
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQ-TIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 541 LKPNNILLDE-NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI--ISPK 597
+K +N+L++ + +SDFG SK L G + +T T T+ YMAPE +G
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLA-GINPCTETFT-GTLQYMAPEIIDKGPRGYGKA 191
Query: 598 SDVYSYGILLMETFTRKKPTNEI 620
+D++S G ++E T K P E+
Sbjct: 192 ADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPP 232
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 233 EAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + ++LE M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPP 215
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 216 EAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 141/341 (41%), Gaps = 60/341 (17%)
Query: 385 NRSTKDGDQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVA 443
NR K+ + + W + D+ +G G+FG V K + DG +
Sbjct: 4 NRKVKNNPDPTIYPVLDWNDIKFQDV------------IGEGNFGQVLKARIKKDGLRMD 51
Query: 444 IKVFNLQLERAS----RSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPNGSL 498
+ ++ E AS R F E E+L + H N+I ++ C + + L +E+ P+G+L
Sbjct: 52 AAIKRMK-EYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 110
Query: 499 EKWLYSHNYF---------------LGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKP 543
+L L + L+ DV ++YL +H +L
Sbjct: 111 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAA 167
Query: 544 NNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSY 603
NIL+ EN A ++DFG+S+ G+ + V +TM + +MA E + + + SDV+SY
Sbjct: 168 RNILVGENYVAKIADFGLSR--GQ-EVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 224
Query: 604 GILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLL 662
G+LL E + P + E+ E LP G R E+ ++C
Sbjct: 225 GVLLWEIVSLGGTPYCGMTCAELY------EKLPQGY---------RLEKP----LNCDD 265
Query: 663 SIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVATT 703
+ L C E P +R S L ++ E+ V TT
Sbjct: 266 EVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYVNTT 306
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG GSFG V Y T G VA+K+ N ++ S + E LR +RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 78
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ D +V+E+ N L ++ + + E + A+EY H +
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR---HKI 133
Query: 537 VHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS- 595
VH DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAG 190
Query: 596 PKSDVYSYGILLMETFTRKKPTNE 619
P+ DV+S G++L R+ P ++
Sbjct: 191 PEVDVWSCGVILYVMLCRRLPFDD 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 100/198 (50%), Gaps = 24/198 (12%)
Query: 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI------RHRNL 473
+ LG G+FG V G G VA+K+ N Q RS D +I R I RH ++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQ---KIRSLDVVGKIRREIQNLKLFRHPHI 78
Query: 474 IK---IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
IK +IS +I +V+E++ G L ++ N L E + + ++Y H
Sbjct: 79 IKLYQVISTPSDI---FMVMEYVSGGELFDYI-CKNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+LLD +M A ++DFG+S ++ +G+ + + Y APE S
Sbjct: 135 HM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---FLRXSCGSPNYAAPEVIS 188
Query: 591 EGIIS-PKSDVYSYGILL 607
+ + P+ D++S G++L
Sbjct: 189 GRLYAGPEVDIWSSGVIL 206
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG GSFG V Y T G VA+K+ N ++ S + E LR +RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 73
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ D +V+E+ N L ++ + + E + A+EY H +
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK-MSEQEARRFFQQIISAVEYCH---RHKI 128
Query: 537 VHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS- 595
VH DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAG 185
Query: 596 PKSDVYSYGILLMETFTRKKPTNE 619
P+ DV+S G++L R+ P ++
Sbjct: 186 PEVDVWSCGVILYVMLCRRLPFDD 209
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + +++E M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 214
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 215 EAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 17/204 (8%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG GSFG V Y T G VA+K+ N ++ S + E LR +RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 69
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ D +V+E+ N + + + E + A+EY H +
Sbjct: 70 YDVIKSKDEIIMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCH---RHKI 124
Query: 537 VHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS- 595
VH DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAG 181
Query: 596 PKSDVYSYGILLMETFTRKKPTNE 619
P+ DV+S G++L R+ P ++
Sbjct: 182 PEVDVWSCGVILYVMLCRRLPFDD 205
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 19/206 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN------VAIKVF-NLQLERASRSFDSECEILRSIRHRNLIK 475
LG G+FG VY+G + N VA+K + E+ F E I+ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLY------SHNYFLGILERLNIMIDVGLALEYLH 529
I + +++E M G L+ +L S L +L+ L++ D+ +YL
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 530 HGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
H +H D+ N LL A + DFG+++ + + + +M P
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPP 229
Query: 587 EYGSEGIISPKSDVYSYGILLMETFT 612
E EGI + K+D +S+G+LL E F+
Sbjct: 230 EAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 17/204 (8%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG GSFG V Y T G VA+K+ N ++ S + E LR +RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTT--TGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKL 79
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ D +V+E+ N L ++ + + E + A+EY H +
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDK-MSEQEARRFFQQIISAVEYCHR---HKI 134
Query: 537 VHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS- 595
VH DLKP N+LLDE++ ++DFG+S ++ +G+ + + Y APE S + +
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVISGKLYAG 191
Query: 596 PKSDVYSYGILLMETFTRKKPTNE 619
P+ DV+S G++L R+ P ++
Sbjct: 192 PEVDVWSCGVILYVMLCRRLPFDD 215
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 17/215 (7%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS------- 460
LD++ + + + LG G F +VYK TN + + ++L S + D
Sbjct: 3 LDVKSRAKRYEKLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALR 61
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N+I ++ + +LV +FM LE + ++ L M+
Sbjct: 62 EIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPSHIKAYMLM 120
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
LEYLH ++H DLKPNN+LLDEN ++DFG++K G + + + T
Sbjct: 121 TLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXH--QVVT 175
Query: 581 IGYMAPE--YGSEGIISPKSDVYSYGILLMETFTR 613
Y APE +G+ + D+++ G +L E R
Sbjct: 176 RWYRAPELLFGAR-MYGVGVDMWAVGCILAELLLR 209
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 197 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 253
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 254 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 303
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 304 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 349
Query: 692 I 692
I
Sbjct: 350 I 350
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 20/222 (9%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQLERASRS----FDSEC 462
D+ F +LG G FGSV + L DG+ V + V L+ + + S F E
Sbjct: 17 DVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREA 76
Query: 463 EILRSIRHRNLIKIISNCCNIDFKA------LVLEFMPNGSLEKWLYS----HNYF-LGI 511
++ H ++ K++ K ++L FM +G L +L + N F L +
Sbjct: 77 ACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPL 136
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
+ M+D+ +EYL S +H DL N +L E+MT V+DFG+S+ + GD
Sbjct: 137 QTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTR 613
+ + ++A E ++ + + SDV+++G+ + E TR
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 421 NLLGTGSFGSVY-KGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
+LG G V+ L D +VA+KV L R F E + ++ H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 477 I----SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ +V+E++ +L +++ G + + + A + L+ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH 133
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
++H D+KP NIL+ V DFGI++ + + +SV QT I T Y++PE
Sbjct: 134 QNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARG 193
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGE----MSLKHWVKESLP-----DGLTEV 642
+ +SDVYS G +L E T + P F G+ ++ +H ++ +P +GL+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 643 VDANLVR 649
+DA +++
Sbjct: 250 LDAVVLK 256
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 148 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 204
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 205 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 254
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 255 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 300
Query: 692 I 692
I
Sbjct: 301 I 301
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 128/312 (41%), Gaps = 63/312 (20%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I-----KEKFLD 698
I E++LD
Sbjct: 316 ILTLTTNEEYLD 327
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 145 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 201
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 202 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 251
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 252 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 297
Query: 692 I 692
I
Sbjct: 298 I 298
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 110/243 (45%), Gaps = 18/243 (7%)
Query: 421 NLLGTGSFGSVY-KGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
+LG G V+ L D +VA+KV L R F E + ++ H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 477 I----SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ +V+E++ +L +++ G + + + A + L+ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH 133
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
++H D+KP NI++ V DFGI++ + + +SV QT I T Y++PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP-----DGLTEVVDAN 646
+ +SDVYS G +L E T + P ++ +H ++ +P +GL+ +DA
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGLSADLDAV 253
Query: 647 LVR 649
+++
Sbjct: 254 VLK 256
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 262
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 263 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 692 I 692
I
Sbjct: 309 I 309
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 262
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 263 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 692 I 692
I
Sbjct: 309 I 309
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLN------I 517
+I ++ C +++E+ G+L ++L YS+N E+L+
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 149 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 205
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 206 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 255
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 256 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 301
Query: 692 I 692
I
Sbjct: 302 I 302
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 113/247 (45%), Gaps = 26/247 (10%)
Query: 421 NLLGTGSFGSVY-KGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
+LG G V+ L D +VA+KV L R F E + ++ H ++ +
Sbjct: 18 EILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 477 I----SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ +V+E++ +L +++ G + + + A + L+ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSH 133
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
++H D+KP NI++ V DFGI++ + + +SV QT I T Y++PE
Sbjct: 134 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARG 193
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEIFIGE----MSLKHWVKESLP-----DGLTEV 642
+ +SDVYS G +L E T + P F G+ ++ +H ++ +P +GL+
Sbjct: 194 DSVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSAD 249
Query: 643 VDANLVR 649
+DA +++
Sbjct: 250 LDAVVLK 256
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-------------SHN--YFLGILERLNI 517
+I ++ C +++E+ G+L ++L SHN L + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNG 212
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 262
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 263 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 692 I 692
I
Sbjct: 309 I 309
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 108/239 (45%), Gaps = 20/239 (8%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIK 475
++G G FG VY G D I+ L R + +F E ++R + H N++
Sbjct: 27 RVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLA 86
Query: 476 IISNCCNID-FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
+I + ++L +M +G L +++ S + + ++ + V +EYL
Sbjct: 87 LIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQ 143
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--IGYMAPEYGSEG 592
VH DL N +LDE+ T V+DFG+++ + + + +Q A + + A E
Sbjct: 144 KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY 203
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK--------ESLPDGLTEVV 643
+ KSDV+S+G+LL E TR P I L H++ E PD L +V+
Sbjct: 204 RFTTKSDVWSFGVLLWELLTRGAPPYR-HIDPFDLTHFLAQGRRLPQPEYCPDSLYQVM 261
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 96/194 (49%), Gaps = 23/194 (11%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRNLIKIISN 479
LG G FG V+ T T VA+K ++ +E +F +E ++++++H L+K+ +
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE----AFLAEANVMKTLQHDKLVKLHAV 245
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVH 538
++ EFM GSL +L S G + L +ID + E + +H
Sbjct: 246 VTKEPI-YIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIH 301
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
DL+ NIL+ ++ ++DFG++++ + I + APE + G + KS
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIKS 350
Query: 599 DVYSYGILLMETFT 612
DV+S+GILLME T
Sbjct: 351 DVWSFGILLMEIVT 364
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 127/312 (40%), Gaps = 63/312 (20%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL-----------YSHNYF----LGILERLNI 517
+I ++ C +++E+ G+L ++L Y N + + ++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I-----KEKFLD 698
I E++LD
Sbjct: 316 ILTLTTNEEYLD 327
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 197
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 198 KDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG G FG V D T + V +L+ E E EILR++ H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 477 ISNCCNIDFKA--LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C L++EF+P+GSL+++L + + + ++L + + ++YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 145
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLL-GEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH DL N+L++ + DFG++K + + + ++ + + + APE +
Sbjct: 146 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 205
Query: 594 ISPKSDVYSYGILLMETFT 612
SDV+S+G+ L E T
Sbjct: 206 FYIASDVWSFGVTLHELLT 224
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 98/243 (40%), Gaps = 55/243 (22%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECE 463
T Y +R F E L+G+G FG V+K DG I+ E+A R E +
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVK 57
Query: 464 ILRSIRHRNLIKIISNCCNIDFKA-----------------------------LVLEFMP 494
L + H N++ D+ + +EF
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH-------HGHSTPMVHCDLKPNNIL 547
G+LE+W I +R +D LALE + HS ++H DLKP+NI
Sbjct: 118 KGTLEQW---------IEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 548 LDENMTAHVSDFG-ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGIL 606
L + + DFG ++ L +G +T + T+ YM+PE S + D+Y+ G++
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGK----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 607 LME 609
L E
Sbjct: 225 LAE 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 426 GSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEI--LRSIRHRNLIKIIS----- 478
G FG V+K L + VA+K+F +Q +S+ +E E+ L ++H N+++ I
Sbjct: 35 GRFGCVWKAQLLN-EYVAVKIFPIQ---DKQSWQNEYEVYSLPGMKHENILQFIGAEKRG 90
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH-------G 531
++D L+ F GSL +L ++ + E +I + L YLH G
Sbjct: 91 TSVDVDL-WLITAFHEKGSLSDFLKAN--VVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H + H D+K N+LL N+TA ++DFG++ G + + T YMAPE E
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV-LE 206
Query: 592 GIISPKS------DVYSYGILLMETFTR 613
G I+ + D+Y+ G++L E +R
Sbjct: 207 GAINFQRDAFLRIDMYAMGLVLWELASR 234
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKI 476
LG G FG V D T + V +L+ E E EILR++ H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 477 ISNCCNIDFKA--LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
C L++EF+P+GSL+++L + + + ++L + + ++YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL---GSR 133
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLL-GEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH DL N+L++ + DFG++K + + + ++ + + + APE +
Sbjct: 134 QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSK 193
Query: 594 ISPKSDVYSYGILLMETFT 612
SDV+S+G+ L E T
Sbjct: 194 FYIASDVWSFGVTLHELLT 212
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-------------SHN--YFLGILERLNI 517
+I ++ C +++E+ G+L ++L SHN L + ++
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 156 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 212
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 213 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 262
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 263 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 308
Query: 692 I 692
I
Sbjct: 309 I 309
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 206
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRN 472
LG G+FG V K T VA+K+ E+ SE E+++ I +H+N
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLY-------------SHN--YFLGILERLNI 517
+I ++ C +++E+ G+L ++L SHN L + ++
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V +EYL S +H DL N+L+ E+ ++DFG+++ + D T
Sbjct: 141 AYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNG 197
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT------RKKPTNEIFIGEMSLKHWV 631
+ +MAPE + I + +SDV+S+G+LL E FT P E+F
Sbjct: 198 RLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF---------- 247
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 248 --------------KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 293
Query: 692 I 692
I
Sbjct: 294 I 294
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G + K L + F + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 142 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 198
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 199 ESLKDGVFTTSSDMWSFGVVLWE 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 109/228 (47%), Gaps = 34/228 (14%)
Query: 393 QEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVY------KGTLFDGTNVAIKV 446
+E+ S ++W++ + DI++ F LGTG+F V G LF + K
Sbjct: 4 RENGESSSSWKKQAE-DIKKI---FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKA 59
Query: 447 FNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL-----EKW 501
L+ S ++E +LR I+H N++ + + + LV++ + G L EK
Sbjct: 60 ----LKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG 115
Query: 502 LYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSD 558
Y+ ++ ++ L+ +++ H +VH DLKP N+L DE +SD
Sbjct: 116 FYTEKDASTLIRQV---------LDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD 166
Query: 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGIL 606
FG+SK+ G+GD + + T GY+APE ++ S D +S G++
Sbjct: 167 FGLSKMEGKGD---VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVI 211
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 29/213 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTN-VAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKIIS 478
LG GSFG V T + VA+K + QL + S + E L+ +RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVG--------LALEYLHH 530
+V+E+ G L F I+E+ + D G A+EY H
Sbjct: 77 VITTPTDIVMVIEY-AGGEL---------FDYIVEKKRMTEDEGRRFFQQIICAIEYCHR 126
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+LLD+N+ ++DFG+S ++ +G+ + + Y APE +
Sbjct: 127 HK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FLKTSCGSPNYAAPEVIN 180
Query: 591 EGIIS-PKSDVYSYGILLMETFTRKKPTNEIFI 622
+ + P+ DV+S GI+L + P ++ FI
Sbjct: 181 GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFI 213
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAP 201
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 417 FNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
F E L+G+G FG V+K DG IK E+A R E + L + H N++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 476 IISNCCNIDFKA----------------LVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
D+ + +EF G+LE+W I +R +
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQW---------IEKRRGEKL 119
Query: 520 DVGLALEYLH-------HGHSTPMVHCDLKPNNILLDENMTAHVSDFG-ISKLLGEGDDS 571
D LALE + HS +++ DLKP+NI L + + DFG ++ L +G
Sbjct: 120 DKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGK-- 177
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+ + T+ YM+PE S + D+Y+ G++L E
Sbjct: 178 --RXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAE 213
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 27/213 (12%)
Query: 426 GSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRS--IRHRNLIKIIS---NC 480
G FG V+K L + VA+K+F LQ +S+ SE EI + ++H NL++ I+
Sbjct: 26 GRFGCVWKAQLMNDF-VAVKIFPLQ---DKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 481 CNIDFK-ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH--------G 531
N++ + L+ F GSL +L + + E ++ + L YLH G
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYLKGN--IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H + H D K N+LL ++TA ++DFG++ G + T YMAPE E
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV-LE 198
Query: 592 GIISPKS------DVYSYGILLMETFTRKKPTN 618
G I+ + D+Y+ G++L E +R K +
Sbjct: 199 GAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 209 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 265
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 266 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 315
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 316 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361
Query: 692 I 692
I
Sbjct: 362 I 362
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 152 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 208
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 209 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 258
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 259 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 304
Query: 692 I 692
I
Sbjct: 305 I 305
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 155 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 211
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 212 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 261
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 262 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 307
Query: 692 I 692
I
Sbjct: 308 I 308
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++E+ G+L ++L YS++ E++
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 150 TYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 206
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 207 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 256
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 257 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 302
Query: 692 I 692
I
Sbjct: 303 I 303
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 111/245 (45%), Gaps = 24/245 (9%)
Query: 417 FNECNLLGTGSFGSVY-KGTLFDGTNVAIKVFN----LQLERASRSFDSECEILRSIRHR 471
F LGTGSFG V+ + +G A+KV ++L++ + D +L + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERL-MLSIVTHP 66
Query: 472 NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG 531
+I++ + ++++++ G L L F + + +V LALEYLH
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF-YAAEVCLALEYLH-- 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
S +++ DLKP NILLD+N ++DFG +K + + + T Y+APE S
Sbjct: 124 -SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-----VTYXLCGTPDYIAPEVVST 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP---------TNEIFIGEMSLKHWVKESLPDGLTEV 642
+ D +S+GIL+ E P +I E+ + E + D L+ +
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKDLLSRL 237
Query: 643 VDANL 647
+ +L
Sbjct: 238 ITRDL 242
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 201
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 8 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 67
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 126
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 179
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 203
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 204 KDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 121
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 122 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 174
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTXLCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 144 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 201 ESLKDGVFTTSSDMWSFGVVLWE 223
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G + K L + F + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKF-DEQRTATYITELANALS 127
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLXGTLDYLPP 180
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 206
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 207 KDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 37 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 152
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 153 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 209 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 240
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS------HNYFLGILERLNIMIDVGLALEYLH 529
++ +++E M G L+ +L S +N L ++ G + +
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 212
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 213 KDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 96/203 (47%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS------HNYFLGILERLNIMIDVGLALEYLH 529
++ +++E M G L+ +L S +N L ++ G + +
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 202
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 203 KDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 50 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 165
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 166 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 222 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 253
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 234
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 235 KDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 86/198 (43%), Gaps = 6/198 (3%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIK---VFNLQLERASRSFDSECEILRSIRHRNLIKIIS 478
+G G F VY+ L DG VA+K +F+L +A E ++L+ + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
+ + +VLE G L + + ++ + L H HS ++H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS 598
D+KP N+ + + D G+ + + + T YM+PE E + KS
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKS 217
Query: 599 DVYSYGILLMETFTRKKP 616
D++S G LL E + P
Sbjct: 218 DIWSLGCLLYEMAALQSP 235
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTELCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N ++ E+ T + DFG+++ + E D + + +M+PE
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 205
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 206 KDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 11 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 126
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 127 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 183 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 12 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 127
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 128 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 184 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 215
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 21 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 80
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 139
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 140 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 192
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 193 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 248
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 17 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 132
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 133 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 189 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 220
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q F+ LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL N ++DFG S S +T T+ Y+ P
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 179
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F P E + + + V+ + PD +TE
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIIS-- 478
+G G FG V++G + G VA+K+F+ R RS+ E EI +++ RH N++ I+
Sbjct: 14 IGKGRFGEVWRGK-WRGEEVAVKIFS---SREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 479 NCCNIDFKALVL--EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLHHGHS 533
N N + L L ++ +GSL +L + + + +L + GLA +E +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGK 129
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA------TIGYMAPE 587
+ H DLK NIL+ +N T ++D G L DS T+ IA T YMAPE
Sbjct: 130 PAIAHRDLKSKNILVKKNGTCCIADLG----LAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
Query: 588 YGSEGI------ISPKSDVYSYGILLMETFTR 613
+ I ++D+Y+ G++ E R
Sbjct: 186 VLDDSINMKHFESFKRADIYAMGLVFWEIARR 217
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 441 NVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKIIS----NCCNIDFKALVLEFM 493
+VA+KV L R F E + ++ H ++ + + +V+E++
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYV 98
Query: 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553
+L +++ G + + + A + L+ H ++H D+KP NI++
Sbjct: 99 DGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 554 AHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
V DFGI++ + + +SV QT I T Y++PE + +SDVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 613 RKKPTNEIFIGE----MSLKHWVKESLP-----DGLTEVVDANLVR 649
+ P F G+ ++ +H ++ +P +GL+ +DA +++
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK 256
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 118/256 (46%), Gaps = 23/256 (8%)
Query: 429 GSVYKGTLFDGTNVAIKVFNLQ--LERASRSFDSECEILRSIRHRNLIKIISNCCN--ID 484
G ++KG + G ++ +KV ++ R SR F+ EC LR H N++ ++ C +
Sbjct: 24 GELWKGR-WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 485 FKALVLEFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKP 543
L+ +MP GSL L+ N+ + + + +D+ + +LH H L
Sbjct: 83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHA-LNS 141
Query: 544 NNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE---YGSEGIISPKSDV 600
++++DE+MTA +S + + S + ++APE E +D+
Sbjct: 142 RSVMIDEDMTARIS-------MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 601 YSYGILLMETFTRKKPTNEIFIGEMSLK---HWVKESLPDGLTEVVDANL---VREEQAF 654
+S+ +LL E TR+ P ++ E+ +K ++ ++P G++ V + + E+ A
Sbjct: 195 WSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAK 254
Query: 655 SVKIDCLLSIMHLALD 670
K D ++ I+ D
Sbjct: 255 RPKFDMIVPILEKMQD 270
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 441 NVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKII----SNCCNIDFKALVLEFM 493
+VA+KV L R F E + ++ H ++ + + +V+E++
Sbjct: 39 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 98
Query: 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553
+L +++ G + + + A + L+ H ++H D+KP NI++
Sbjct: 99 DGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 154
Query: 554 AHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
V DFGI++ + + +SV QT I T Y++PE + +SDVYS G +L E T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 613 RKKPTNEIFIGE----MSLKHWVKESLP-----DGLTEVVDANLVR 649
+ P F G+ ++ +H ++ +P +GL+ +DA +++
Sbjct: 215 GEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK 256
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++ + G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 37/228 (16%)
Query: 412 RATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH 470
R + F E +LG G+FG V K D AIK E+ S + SE +L S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 471 -------------RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI 517
RN +K ++ + +E+ NG+L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK-------------- 563
+ AL Y+H S ++H DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 564 -LLGEGDDSVIQTMTIATIGYMAPEY-GSEGIISPKSDVYSYGILLME 609
L G D+ T I T Y+A E G + K D+YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 176
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 417 FNECNLLGTGSFGSVY---KGTLFD-GTNVAIKVFN---LQLERASRSFDSECEILRSIR 469
F +LG GSFG V+ K T D G A+KV L++ R+ E +IL +
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADVN 88
Query: 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
H ++K+ L+L+F+ G L L F + + ++ L L++LH
Sbjct: 89 HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALGLDHLH 147
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEY 588
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 148 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEV 201
Query: 589 GSEGIISPKSDVYSYGILLMETFT 612
+ S +D +SYG+L+ E T
Sbjct: 202 VNRQGHSHSADWWSYGVLMFEMLT 225
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSC----HAPSSRRTTLSGTLDYLPP 176
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLER--ASRSFDSECEILRSIRH 470
+ F+ LG G FG+VY + A+KV F QLE+ E EI +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++++ + + L+LEF P G L K L H F E+ + LA + LH+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD---EQRSATFMEELA-DALHY 129
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
H ++H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 185
Query: 591 EGIISPKSDVYSYGILLME 609
K D++ G+L E
Sbjct: 186 GKTHDEKVDLWCAGVLCYE 204
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 10/202 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLF-DGTNV----AIKVFNLQLE-RASRSFDSECEILRSIRH 470
+ +LG+G+FG+VYKG DG NV AIKV +A++ E ++ +
Sbjct: 19 LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGS 78
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
+ +++ C + LV + MP G L + + LG + LN + + + YL
Sbjct: 79 PYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLE- 136
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DL N+L+ ++DFG+++LL + I +MA E
Sbjct: 137 --DVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 591 EGIISPKSDVYSYGILLMETFT 612
+ +SDV+SYG+ + E T
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS-------------HNYFLGILERLNIMID 520
++ C +V+ EF G+L +L S + FL + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 157 VAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 180
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 181 EXIEGRXHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 99/222 (44%), Gaps = 33/222 (14%)
Query: 421 NLLGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRN 472
+LG+G+FG V T + VA+K+ + + + R + SE +++ + H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL-------------YSHNYFLGILERLNIMI 519
++ ++ C L+ E+ G L +L Y + L E LN++
Sbjct: 111 IVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 520 ---------DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
V +E+L VH DL N+L+ + DFG+++ + +
Sbjct: 171 FEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN 227
Query: 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
V++ + +MAPE EGI + KSDV+SYGILL E F+
Sbjct: 228 YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 119
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 120 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTTLCGTLDYLPP 172
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNV----AIKVFN---LQLERASRSFDSECEILRSIR 469
F +LG GSFG V+ G++ A+KV L++ R+ E +IL +
Sbjct: 27 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 85
Query: 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI-MIDVGLALEYL 528
H ++K+ L+L+F+ G L L F E + + ++ LAL++L
Sbjct: 86 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE--EDVKFYLAELALALDHL 143
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPE 587
H S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 144 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPE 197
Query: 588 YGSEGIISPKSDVYSYGILLMETFT 612
+ + +D +S+G+L+ E T
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLT 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 100/205 (48%), Gaps = 18/205 (8%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNV----AIKVFN---LQLERASRSFDSECEILRSIR 469
F +LG GSFG V+ G++ A+KV L++ R+ E +IL +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI-MIDVGLALEYL 528
H ++K+ L+L+F+ G L L F E + + ++ LAL++L
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTE--EDVKFYLAELALALDHL 142
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPE 587
H S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 143 H---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPE 196
Query: 588 YGSEGIISPKSDVYSYGILLMETFT 612
+ + +D +S+G+L+ E T
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 127
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S +T T+ Y+ P
Sbjct: 128 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRTDLCGTLDYLPP 180
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 181 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 13/203 (6%)
Query: 423 LGTGSFGSVY----KGTLFDG--TNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY KG + D T VAIK N R F +E +++ ++++
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDV-GLALEYLH 529
++ +++E M G L+ +L S N + L+ MI + G + +
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
+ ++ VH DL N + E+ T + DFG+++ + E D + + +M+PE
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESL 199
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
+G+ + SDV+S+G++L E T
Sbjct: 200 KDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 122/301 (40%), Gaps = 58/301 (19%)
Query: 423 LGTGSFGSVY--------KGTLFDGTNVAIKVF-NLQLERASRSFDSECEILRSI-RHRN 472
LG G+FG V K + VA+K+ + E+ SE E+++ I +H+N
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHNYFLGILERLNI------ 517
+I ++ C +++ + G+L ++L YS++ E++
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
+ +EYL S +H DL N+L+ EN ++DFG+++ + D T
Sbjct: 163 TYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNG 219
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK------PTNEIFIGEMSLKHWV 631
+ +MAPE + + + +SDV+S+G+L+ E FT P E+F
Sbjct: 220 RLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF---------- 269
Query: 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691
L++E +C + + DC P QR + K L +
Sbjct: 270 --------------KLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 315
Query: 692 I 692
I
Sbjct: 316 I 316
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNV----AIKVFN---LQLERASRSFDSECEILRSIR 469
F +LG GSFG V+ G++ A+KV L++ R+ E +IL +
Sbjct: 26 FELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEVN 84
Query: 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
H ++K+ L+L+F+ G L L F + + ++ LAL++LH
Sbjct: 85 HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKF-YLAELALALDHLH 143
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEY 588
S +++ DLKP NILLDE ++DFG+SK E D + + T+ YMAPE
Sbjct: 144 ---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEV 197
Query: 589 GSEGIISPKSDVYSYGILLMETFT 612
+ + +D +S+G+L+ E T
Sbjct: 198 VNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS-----------HNYFLGILERLNIMIDVG 522
++ C +V+ EF G+L +L S + FL + + V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
+E+L S +H DL NILL E + DFG+++ + + D V + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+MAPE + + + +SDV+S+G+LL E F+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKI 476
EC +G G +G V++G L+ G +VA+K+F+ R +S+ E EI ++ RH N++
Sbjct: 14 EC--VGKGRYGEVWRG-LWHGESVAVKIFS---SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 477 ISNCCNIDFKA----LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLH 529
I++ + L+ + +GSL +L + RL + GLA +E
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEIFG 127
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD--SVIQTMTIATIGYMAPE 587
+ H D K N+L+ N+ ++D G++ + +G D + + T YMAPE
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPE 187
Query: 588 YGSEGIIS------PKSDVYSYGILLMETFTR 613
E I + +D++++G++L E R
Sbjct: 188 VLDEQIRTDCFESYKWTDIWAFGLVLWEIARR 219
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 114/230 (49%), Gaps = 30/230 (13%)
Query: 416 GFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ C ++G GSFG V++ L + VAIK ++ + R + E +I+R ++H N++
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKHPNVVD 96
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA----L 525
+ SN D F LVLE++P + +Y + L++ M+ + L L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP-----ETVYRASRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 526 EYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
L + HS + H D+KP N+LLD + + DFG +K+L G+ +V I + Y
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV---SXICSRYYR 208
Query: 585 APE--YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
APE +G+ + D++S G ++ E + +P +F GE + V+
Sbjct: 209 APELIFGATNYTT-NIDIWSTGCVMAE-LMQGQP---LFPGESGIDQLVE 253
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 25/226 (11%)
Query: 441 NVAIKVFNLQLERASR---SFDSECEILRSIRHRNLIKII----SNCCNIDFKALVLEFM 493
+VA+KV L R F E + ++ H ++ + + +V+E++
Sbjct: 56 DVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYV 115
Query: 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553
+L +++ G + + + A + L+ H ++H D+KP NI++
Sbjct: 116 DGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 171
Query: 554 AHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
V DFGI++ + + +SV QT I T Y++PE + +SDVYS G +L E T
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 613 RKKPTNEIFIGE----MSLKHWVKESLP-----DGLTEVVDANLVR 649
+ P F G+ ++ +H ++ +P +GL+ +DA +++
Sbjct: 232 GEPP----FTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLK 273
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G G+ G+VY + G VAI+ NLQ + +E ++R ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+E++ GSL + G + + + ALE+LH S ++H D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFLH---SNQVIHRDI 142
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K +NILL + + ++DFG + + S TM + T +MAPE + PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 602 SYGILLMETFTRKKP 616
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLER--ASRSFDSECEILRSIRH 470
+ F+ LG G FG+VY + A+KV F QLE+ E EI +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++++ + + L+LEF P G L K L H F E+ + LA + LH+
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD---EQRSATFMEELA-DALHY 129
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
H ++H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 130 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 185
Query: 591 EGIISPKSDVYSYGILLME 609
K D++ G+L E
Sbjct: 186 GKTHDEKVDLWCAGVLCYE 204
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLER--ASRSFDSECEILRSIRH 470
+ F+ LG G FG+VY + A+KV F QLE+ E EI +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++++ + + L+LEF P G L K L H F E+ + LA + LH+
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFD---EQRSATFMEELA-DALHY 130
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
H ++H D+KP N+L+ ++DFG S S+ + T+ Y+ PE
Sbjct: 131 CHERKVIHRDIKPENLLMGYKGELKIADFGWSV----HAPSLRRRXMCGTLDYLPPEMIE 186
Query: 591 EGIISPKSDVYSYGILLME 609
K D++ G+L E
Sbjct: 187 GKTHDEKVDLWCAGVLCYE 205
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G G+ G+VY + G VAI+ NLQ + +E ++R ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+E++ GSL + G + + + ALE+LH S ++H D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQI--AAVCRECLQALEFLH---SNQVIHRDI 142
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K +NILL + + ++DFG + ++ + T +MAPE + PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 602 SYGILLMETFTRKKP 616
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G G+ G+VY + G VAI+ NLQ + +E ++R ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+E++ GSL + G + + + ALE+LH S ++H D+
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFLH---SNQVIHRDI 143
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K +NILL + + ++DFG + ++ + T +MAPE + PK D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 602 SYGILLMETFTRKKP 616
S GI+ +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 177
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERAS---RSFDSECEIL 465
I F NLLG GSF VY+ ++ G VAIK+ + + + + +E +I
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
++H +++++ + + ++ LVLE NG + ++L + E + M + +
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM 125
Query: 526 EYLH-HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
YLH HG ++H DL +N+LL NM ++DFG++ L + T Y+
Sbjct: 126 LYLHSHG----ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEK--HYTLCGTPNYI 179
Query: 585 APEYGSEGIISPKSDVYSYGILL---------METFTRKKPTNEIFIGEMSLKHWVKESL 635
+PE + +SDV+S G + +T T K N++ + + + ++
Sbjct: 180 SPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEA 239
Query: 636 PDGLTEVVDAN 646
D + +++ N
Sbjct: 240 KDLIHQLLRRN 250
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 23/210 (10%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS-----------HNYFLGILERLNIMIDVG 522
++ C +V+ EF G+L +L S + FL + + V
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
+E+L S +H DL NILL E + DFG+++ + + D V + +
Sbjct: 155 KGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK 211
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+MAPE + + + +SDV+S+G+LL E F+
Sbjct: 212 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 123
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S T+ T+ Y+ P
Sbjct: 124 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWS---VHAPSSRRDTLC-GTLDYLPP 176
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 177 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 124
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL +++FG S S +T T+ Y+ P
Sbjct: 125 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPP 177
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 178 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 123 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + + A+KV F QLE+A E EI
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 123 YCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRAALCGTLDYLPP 175
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 98/213 (46%), Gaps = 26/213 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS--------------HNYFLGILERLNIMI 519
++ C +V+ EF G+L +L S + FL + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 156 QVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G G+ G+VY + G VAI+ NLQ + +E ++R ++ N++ + +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+E++ GSL + G + + + ALE+LH S ++H D+
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFLH---SNQVIHRDI 142
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K +NILL + + ++DFG + ++ + T +MAPE + PK D++
Sbjct: 143 KSDNILLGMDGSVKLTDFGFCAQITPEQSK--RSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
Query: 602 SYGILLMETFTRKKP 616
S GI+ +E + P
Sbjct: 201 SLGIMAIEMIEGEPP 215
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL +++FG S S +T T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSV----HAPSSRRTTLCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRXXLCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH +L N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 146 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 203 ESLKDGVFTTSSDMWSFGVVLWE 225
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Query: 413 ATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFD-SECEILRSIRH 470
+++ F + LG G++ +VYKG G VA+K L E + S E +++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY-------FLGILERLNIMIDVGL 523
N++++ + LV EFM N L+K++ S L +++ + GL
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGL 121
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGY 583
A H ++H DLKP N+L+++ + DFG+++ G ++ + + T+ Y
Sbjct: 122 AF-----CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTF--SSEVVTLWY 174
Query: 584 MAPEY--GSEGIISPKSDVYSYGILLMETFTRK 614
AP+ GS S D++S G +L E T K
Sbjct: 175 RAPDVLMGSR-TYSTSIDIWSCGCILAEMITGK 206
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH +L N ++ + T + DFG+++ + E D + + +MAP
Sbjct: 145 YLN---AKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q F+ LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 8 QWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQS 67
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRF-DEQRTATYITELANALS 126
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL N ++DFG S S T+ T+ Y+ P
Sbjct: 127 YCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSV---HAPSSRRDTLC-GTLDYLPP 179
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F P E + + + V+ + PD +TE
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYE-FLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 125
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 126 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
Query: 431 VYKGTLFDGTNVAIKVFNL--------QLERASRSFDSECEILRSIR-HRNLIKIISNCC 481
V++ T G A+K+ + QLE + E ILR + H ++I +I +
Sbjct: 114 VHRAT---GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ F LV + M G L +L + L E +IM + A+ +LH + +VH DL
Sbjct: 171 SSSFMFLVFDLMRKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDL 226
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE------------YG 589
KP NILLD+NM +SDFG S L G+ ++ + T GY+APE YG
Sbjct: 227 KPENILLDDNMQIRLSDFGFSCHLEPGEK--LRELC-GTPGYLAPEILKCSMDETHPGYG 283
Query: 590 SEGIISPKSDVYSYGILLM 608
E D+++ G++L
Sbjct: 284 KE------VDLWACGVILF 296
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 15/237 (6%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKV-FNLQLERA--SRSFDSECEILR 466
Q A F LG G FG+VY + A+KV F QLE+A E EI
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+RH N++++ + L+LE+ P G++ + L + F + ++ AL
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF-DEQRTATYITELANALS 148
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
Y H S ++H D+KP N+LL ++DFG S S + T+ Y+ P
Sbjct: 149 YCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSV----HAPSSRRDDLCGTLDYLPP 201
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH--WVKESLPDGLTE 641
E + K D++S G+L E F KP E + + K V+ + PD +TE
Sbjct: 202 EMIEGRMHDEKVDLWSLGVLCYE-FLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 257
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
S SD+++ G ++ +
Sbjct: 210 SASKSSDLWALGCIIYQ 226
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 93/203 (45%), Gaps = 19/203 (9%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSIRHRNLIK 475
LG GSFG VY+G D T VA+K N R F +E +++ ++++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL---------GILERLNIMIDVGLALE 526
++ +V+E M +G L+ +L S + E + + ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YL+ + VH DL N ++ + T + DFG+++ + E + + +MAP
Sbjct: 145 YLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAP 201
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +G+ + SD++S+G++L E
Sbjct: 202 ESLKDGVFTTSSDMWSFGVVLWE 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G G+ G+VY + G VAI+ NLQ + +E ++R ++ N++ + +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+E++ GSL + G + + + ALE+L HS ++H ++
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIAA--VCRECLQALEFL---HSNQVIHRNI 143
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K +NILL + + ++DFG + + S TM + T +MAPE + PK D++
Sbjct: 144 KSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTM-VGTPYWMAPEVVTRKAYGPKVDIW 201
Query: 602 SYGILLMETFTRKKP 616
S GI+ +E + P
Sbjct: 202 SLGIMAIEMIEGEPP 216
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYL---- 528
++ C +V+ EF G+L +L S N F+ E + L LE+L
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 529 -------HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
S +H DL NILL E + DFG+++ + + D V + +
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+MAPE + + + +SDV+S+G+LL E F+
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILR 466
++ F +LG GSF +V L AIK+ ++ E E +++
Sbjct: 6 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 65
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+ H +K+ + + L + NG L K++ F R ++ ALE
Sbjct: 66 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 124
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 125 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +E SD+++ G ++ +
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQ 204
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 192 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 37/228 (16%)
Query: 412 RATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH 470
R + F E +LG G+FG V K D AIK E+ S + SE +L S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVMLLASLNH 61
Query: 471 -------------RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI 517
RN +K ++ + +E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK-------------- 563
+ AL Y+H S ++H DLKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 564 -LLGEGDDSVIQTMTIATIGYMAPEY-GSEGIISPKSDVYSYGILLME 609
L G D+ T I T Y+A E G + K D+YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFE 223
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 93/199 (46%), Gaps = 16/199 (8%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNLIKIISN 479
+GTGS+G K DG + K + E + SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 480 CCNIDFKAL--VLEFMPNGSLEKWLYSHNYFLGILER---LNIMIDVGLALEYLHH---- 530
+ L V+E+ G L + L+ L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
GH+ ++H DLKP N+ LD + DFG++++L D S +T + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNH-DTSFAKTF-VGTPYYMSPEQMN 189
Query: 591 EGIISPKSDVYSYGILLME 609
+ KSD++S G LL E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 146 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 423 LGTGSFGSVYKGTLF--DGT----NVAIKVFNLQLERAS-RSFDSECEILRSIRHR-NLI 474
LG G+FG V + F D T VA+K+ + R+ SE +IL I H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 475 KIISNCCNIDFKALVL-EFMPNGSLEKWLYS---------------HNYFLGILERLNIM 518
++ C +V+ EF G+L +L S + FL + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
V +E+L S +H DL NILL E + DFG+++ + + D V +
Sbjct: 155 FQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILR 466
++ F +LG GSF +V L AIK+ ++ E E +++
Sbjct: 5 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 64
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+ H +K+ + + L + NG L K++ F R ++ ALE
Sbjct: 65 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 123
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 124 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +E SD+++ G ++ +
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQ 203
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 16/199 (8%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNLIKIISN 479
+GTGS+G K DG + K + E + SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 480 CCNIDFKAL--VLEFMPNGSLEKWLYSHNYFLGILER---LNIMIDVGLALEYLHH---- 530
+ L V+E+ G L + L+ L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
GH+ ++H DLKP N+ LD + DFG++++L +D + + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKE--FVGTPYYMSPEQMN 189
Query: 591 EGIISPKSDVYSYGILLME 609
+ KSD++S G LL E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 441 NVAIKVFNLQLERASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497
VAIK NL E+ S D E + + H N++ ++ D LV++ + GS
Sbjct: 37 KVAIKRINL--EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 94
Query: 498 ----LEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553
++ + + G+L+ I + LE L + H +H D+K NILL E+ +
Sbjct: 95 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 154
Query: 554 AHVSDFGISKLLGEGDD---SVIQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLME 609
++DFG+S L G D + ++ + T +MAPE + K+D++S+GI +E
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 610 TFTRKKPTNE 619
T P ++
Sbjct: 215 LATGAAPYHK 224
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 13/190 (6%)
Query: 441 NVAIKVFNLQLERASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497
VAIK NL E+ S D E + + H N++ ++ D LV++ + GS
Sbjct: 42 KVAIKRINL--EKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99
Query: 498 ----LEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553
++ + + G+L+ I + LE L + H +H D+K NILL E+ +
Sbjct: 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGS 159
Query: 554 AHVSDFGISKLLGEGDD---SVIQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLME 609
++DFG+S L G D + ++ + T +MAPE + K+D++S+GI +E
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 610 TFTRKKPTNE 619
T P ++
Sbjct: 220 LATGAAPYHK 229
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILR 466
++ F +LG GSF +V L AIK+ ++ E E +++
Sbjct: 4 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 63
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+ H +K+ + + L + NG L K++ F R ++ ALE
Sbjct: 64 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 122
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 123 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +E SD+++ G ++ +
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQ 202
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKI 476
EC +G G +G V++G+ + G NVA+K+F+ R +S+ E E+ ++ RH N++
Sbjct: 43 EC--VGKGRYGEVWRGS-WQGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 96
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER------------LNIMIDVGLA 524
I++ D + + S + WL +H + +G L L I++ +
Sbjct: 97 IAS----DMTS------RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 146
Query: 525 LEYLH----HGHSTPMV-HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS--VIQTMT 577
L +LH P + H DLK NIL+ +N ++D G++ + + + V
Sbjct: 147 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 206
Query: 578 IATIGYMAPEYGSEGIIS------PKSDVYSYGILLMETFTR 613
+ T YMAPE E I + D++++G++L E R
Sbjct: 207 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 248
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 210 SAXKSSDLWALGCIIYQ 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 90/203 (44%), Gaps = 8/203 (3%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILR 466
++ F +LG GSF +V L AIK+ ++ E E +++
Sbjct: 3 KKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMS 62
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+ H +K+ + + L + NG L K++ F R ++ ALE
Sbjct: 63 RLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALE 121
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
YLH ++H DLKP NILL+E+M ++DFG +K+L + T Y++P
Sbjct: 122 YLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 178
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E +E SD+++ G ++ +
Sbjct: 179 ELLTEKSACKSSDLWALGCIIYQ 201
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNLIKIISN 479
+GTGS+G K DG + K + E + SE +LR ++H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 480 CCNIDFKAL--VLEFMPNGSLEKWLYSHNYFLGILER---LNIMIDVGLALEYLHH---- 530
+ L V+E+ G L + L+ L +M + LAL+ H
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
GH+ ++H DLKP N+ LD + DFG++++L D+ + T YM+PE +
Sbjct: 134 GHT--VLHRDLKPANVFLDGKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMN 189
Query: 591 EGIISPKSDVYSYGILLME 609
+ KSD++S G LL E
Sbjct: 190 RMSYNEKSDIWSLGCLLYE 208
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKI 476
EC +G G +G V++G+ + G NVA+K+F+ R +S+ E E+ ++ RH N++
Sbjct: 14 EC--VGKGRYGEVWRGS-WQGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER------------LNIMIDVGLA 524
I++ D + + S + WL +H + +G L L I++ +
Sbjct: 68 IAS----DMTS------RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 525 LEYLH----HGHSTPMV-HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS--VIQTMT 577
L +LH P + H DLK NIL+ +N ++D G++ + + + V
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 578 IATIGYMAPEYGSEGIIS------PKSDVYSYGILLMETFTR 613
+ T YMAPE E I + D++++G++L E R
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 43/222 (19%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKI 476
EC +G G +G V++G+ + G NVA+K+F+ R +S+ E E+ ++ RH N++
Sbjct: 14 EC--VGKGRYGEVWRGS-WQGENVAVKIFS---SRDEKSWFRETELYNTVMLRHENILGF 67
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER------------LNIMIDVGLA 524
I++ D + + S + WL +H + +G L L I++ +
Sbjct: 68 IAS----DMTS------RHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASG 117
Query: 525 LEYLH----HGHSTPMV-HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS--VIQTMT 577
L +LH P + H DLK NIL+ +N ++D G++ + + + V
Sbjct: 118 LAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPR 177
Query: 578 IATIGYMAPEYGSEGIIS------PKSDVYSYGILLMETFTR 613
+ T YMAPE E I + D++++G++L E R
Sbjct: 178 VGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR 219
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 210
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 211 SACKSSDLWALGCIIYQ 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 152
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 212
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 213 SACKSSDLWALGCIIYQ 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEK 207
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 149
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 209
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 210 SACKSSDLWALGCIIYQ 226
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGS-VYKGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF + V L AIK+ ++ E E +++ + H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 91
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 92 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 147
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 207
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 208 SACKSSDLWALGCIIYQ 224
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 473 LIKIISNCCNIDFKALV-LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG 531
+K+ C D K L + NG L K++ F R ++ ALEYLH
Sbjct: 99 FVKLYF-CFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH-- 154
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 155 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE 213
Query: 592 GIISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 214 KSACKSSDLWALGCIIYQ 231
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 150
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 210
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 211 SACKSSDLWALGCIIYQ 227
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 417 FNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFD---SECEILRSIRHRN 472
F++ +G GSFG+VY + + VAIK + ++++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
I+ LV+E+ GS L H L+ + I AL+ L + H
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH 171
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---G 589
S M+H D+K NILL E + DFG + ++ + + T +MAPE
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAM 225
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKP 616
EG K DV+S GI +E RK P
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPP 252
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 75
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 76 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 131
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 191
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 192 SACKSSDLWALGCIIYQ 208
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEK 206
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 207 SACKSSDLWALGCIIYQ 223
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 10/206 (4%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
F+ LG GS+GSVYK + G VAIK + +E + E I++ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIK--QVPVESDLQEIIKEISIMQQCDSPHVVK 88
Query: 476 II-SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
S N D +V+E+ GS+ + N L E I+ LEYLH
Sbjct: 89 YYGSYFKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK- 146
Query: 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGII 594
+H D+K NILL+ A ++DFG++ L D + I T +MAPE E
Sbjct: 147 --IHRDIKAGNILLNTEGHAKLADFGVAGQL--TDXMAKRNXVIGTPFWMAPEVIQEIGY 202
Query: 595 SPKSDVYSYGILLMETFTRKKPTNEI 620
+ +D++S GI +E K P +I
Sbjct: 203 NCVADIWSLGITAIEMAEGKPPYADI 228
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS--RSFDSECEIL 465
L Q + + +G G++G VYK G VA+K L E + E +L
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++ +I + LV EFM L+K L + L + I I + L
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLL 129
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ H H ++H DLKP N+L++ + ++DFG+++ G S T + T+ Y A
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 586 PEY--GSEGIISPKSDVYSYGILLMETFTRK 614
P+ GS+ S D++S G + E T K
Sbjct: 188 PDVLMGSKK-YSTSVDIWSIGCIFAEMITGK 217
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 11/211 (5%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERAS--RSFDSECEIL 465
L Q + + +G G++G VYK G VA+K L E + E +L
Sbjct: 14 LYFQGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLL 73
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++ +I + LV EFM L+K L + L + I I + L
Sbjct: 74 KELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGL---QDSQIKIYLYQLL 129
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ H H ++H DLKP N+L++ + ++DFG+++ G S T + T+ Y A
Sbjct: 130 RGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRA 187
Query: 586 PEY--GSEGIISPKSDVYSYGILLMETFTRK 614
P+ GS+ S D++S G + E T K
Sbjct: 188 PDVLMGSKK-YSTSVDIWSIGCIFAEMITGK 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 14/209 (6%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNLQ--LERAS-RSFDSECEILRSIRH 470
+ F +G GSFG V D + A+K N Q +ER R+ E +I++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
L+ + + + + +V++ + G L L + +F +L I ++ +AL+YL +
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQN 133
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
++H D+KP+NILLDE+ H++DF I+ +L ++ I TM T YMAPE S
Sbjct: 134 QR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPR--ETQITTMA-GTKPYMAPEMFS 187
Query: 591 E---GIISPKSDVYSYGILLMETFTRKKP 616
S D +S G+ E ++P
Sbjct: 188 SRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G+FG VYK + G A KV + E + E EIL + H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +++EF P G+++ + + G+ E I + LE L+ HS ++H DL
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDR--GLTEP-QIQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 542 KPNNILLDENMTAHVSDFGIS----KLLGEGDDSVIQTMTIATIGYMAPEY-----GSEG 592
K N+L+ ++DFG+S K L + D I T +MAPE +
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS------FIGTPYWMAPEVVMCETMKDT 189
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI L+E + P +E+
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNL 473
E LG+G+FG+V KG V + A+ +E +++ + + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+++I C + LV+E G L K+L N + + ++ V + ++YL +
Sbjct: 434 VRMIG-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN- 490
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
VH DL N+LL A +SDFG+SK L ++ QT + + APE +
Sbjct: 491 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 548
Query: 593 IISPKSDVYSYGILLMETFT 612
S KSDV+S+G+L+ E F+
Sbjct: 549 KFSSKSDVWSFGVLMWEAFS 568
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 11/200 (5%)
Query: 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNL 473
E LG+G+FG+V KG V + A+ +E +++ + + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+++I C + LV+E G L K+L N + + ++ V + ++YL +
Sbjct: 433 VRMIG-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN- 489
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG 592
VH DL N+LL A +SDFG+SK L ++ QT + + APE +
Sbjct: 490 --FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY 547
Query: 593 IISPKSDVYSYGILLMETFT 612
S KSDV+S+G+L+ E F+
Sbjct: 548 KFSSKSDVWSFGVLMWEAFS 567
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 97/208 (46%), Gaps = 19/208 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G+FG VYK + G A KV + E + E EIL + H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +++EF P G+++ + + G+ E I + LE L+ HS ++H DL
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDR--GLTEP-QIQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 542 KPNNILLDENMTAHVSDFGIS----KLLGEGDDSVIQTMTIATIGYMAPEY-----GSEG 592
K N+L+ ++DFG+S K L + D I T +MAPE +
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS------FIGTPYWMAPEVVMCETMKDT 197
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI L+E + P +E+
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVF---NLQLERASRSFDSECEILRSIRHRN 472
F +LG GSF +V L AIK+ ++ E E +++ + H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 90
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+K+ + + L + NG L K++ F R ++ ALEYLH
Sbjct: 91 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF-YTAEIVSALEYLH--- 146
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
++H DLKP NILL+E+M ++DFG +K+L + T Y++PE +E
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK 206
Query: 593 IISPKSDVYSYGILLME 609
SD+++ G ++ +
Sbjct: 207 SACKSSDLWALGCIIYQ 223
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 79 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 133
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKP 214
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 17/207 (8%)
Query: 417 FNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFD---SECEILRSIRHRN 472
F++ +G GSFG+VY + + VAIK + ++++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
I+ LV+E+ GS L H L+ + I AL+ L + H
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLH 132
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY---G 589
S M+H D+K NILL E + DFG + ++ + + T +MAPE
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPAN------XFVGTPYWMAPEVILAM 186
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKP 616
EG K DV+S GI +E RK P
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPP 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQ-LERASRSFDSECEILRSIRHRNLIKIISNC 480
+GTG F V + G VAIK+ + L +E E L+++RH+++ ++
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+ +VLE+ P G L ++ S + L E + + A+ Y+H S H D
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFRQIVSAVAYVH---SQGYAHRD 133
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-YGSEGIISPKSD 599
LKP N+L DE + DFG+ D +QT ++ Y APE + + ++D
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQT-CCGSLAYAAPELIQGKSYLGSEAD 192
Query: 600 VYSYGILL 607
V+S GILL
Sbjct: 193 VWSMGILL 200
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 79 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 133
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 134 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 193
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 194 KSDVWSFGVLMWEAFSYGQKP 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 93 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 147
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 148 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 207
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 208 KSDVWSFGVLMWEAFSYGQKP 228
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 75 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 129
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 130 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 189
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 190 KSDVWSFGVLMWEAFSYGQKP 210
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 95 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 149
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 95 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 149
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 150 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 209
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 210 KSDVWSFGVLMWEAFSYGQKP 230
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 73 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 127
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 128 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 187
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 188 KSDVWSFGVLMWEAFSYGQKP 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 421 NLLGTGSFGSVYKGTLFDGTN-VAIK-VFNLQLERASRSFDSECEILRSIRHRNLIKIIS 478
++LGTG+F V VAIK + LE S ++E +L I+H N++ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 479 NCCNIDFKALVLEFMPNGSL-----EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+ L+++ + G L EK Y+ + ++ V A++YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH---D 134
Query: 534 TPMVHCDLKPNNIL---LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPEVLA 191
Query: 591 EGIISPKSDVYSYGIL 606
+ S D +S G++
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 96/201 (47%), Gaps = 12/201 (5%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR-----SFDSECEILRSIRHRNLIKII 477
LG+G+FG+V KG V + A+ +E +++ + + ++++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
C + LV+E G L K+L N + + ++ V + ++YL + V
Sbjct: 85 G-ICEAESWMLVMEMAELGPLNKYL-QQNRHVKDKNIIELVHQVSMGMKYLEESN---FV 139
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISP 596
H DL N+LL A +SDFG+SK L ++ QT + + APE + S
Sbjct: 140 HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSS 199
Query: 597 KSDVYSYGILLMETFTR-KKP 616
KSDV+S+G+L+ E F+ +KP
Sbjct: 200 KSDVWSFGVLMWEAFSYGQKP 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 99 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 144
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 145 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 202
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 247
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 142 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 187
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 188 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 245
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 290
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 88 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 133
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 134 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 191
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 236
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 97 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 142
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 143 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 200
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 245
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 92 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 137
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 138 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 195
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 240
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 93/208 (44%), Gaps = 18/208 (8%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHST 534
++ C + ++ E+ G L +L + L I + LH
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQV 173
Query: 535 PM----------VHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
+H D+ N+LL A + DFG+++ + + +++ + +M
Sbjct: 174 AQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWM 233
Query: 585 APEYGSEGIISPKSDVYSYGILLMETFT 612
APE + + + +SDV+SYGILL E F+
Sbjct: 234 APESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 30/228 (13%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T+ G VA+K +L+ ++ +E I+R +H N++++ ++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLALEYLHHGH 532
D +V+EF+ G+L + +H L +L+ L+++ H
Sbjct: 219 VGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVL-------------H 264
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
+ ++H D+K ++ILL + +SDFG + + + + + T +MAPE S
Sbjct: 265 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGTPYWMAPELISRL 322
Query: 593 IISPKSDVYSYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGL 639
P+ D++S GI+++E + P NE + M + ++++LP L
Sbjct: 323 PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM---IRDNLPPRL 367
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 421 NLLGTGSFGSVYKGTLFDGTN-VAIK-VFNLQLERASRSFDSECEILRSIRHRNLIKIIS 478
++LGTG+F V VAIK + LE S ++E +L I+H N++ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 479 NCCNIDFKALVLEFMPNGSL-----EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+ L+++ + G L EK Y+ + ++ V A++YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH---D 134
Query: 534 TPMVHCDLKPNNIL---LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPEVLA 191
Query: 591 EGIISPKSDVYSYGIL 606
+ S D +S G++
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 91/220 (41%), Gaps = 33/220 (15%)
Query: 423 LGTGSFGSVYKG------TLFDGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
+G G+FG V++ T VA+K+ + ++ F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-----------------------LGIL 512
++ C L+ E+M G L ++L S + L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
E+L I V + YL VH DL N L+ ENM ++DFG+S+ + D
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYK 231
Query: 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
I +M PE + +SDV++YG++L E F+
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 412 RATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH 470
R T F E +LG+G+F V+ G A+K S ++E +L+ I+H
Sbjct: 8 RKTFIFME--VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER-------LNIMIDVGL 523
N++ + + LV++ + G L F ILER +++I L
Sbjct: 66 ENIVTLEDIYESTTHYYLVMQLVSGGEL---------FDRILERGVYTEKDASLVIQQVL 116
Query: 524 -ALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
A++YLH +VH DLKP N+L +EN ++DFG+SK+ G I +
Sbjct: 117 SAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG----IMSTACG 169
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T GY+APE ++ S D +S G++
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVI 196
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 421 NLLGTGSFGSVYKGTLFDGTN-VAIKVFNLQ-LERASRSFDSECEILRSIRHRNLIKIIS 478
++LGTG+F V VAIK + LE S ++E +L I+H N++ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 479 NCCNIDFKALVLEFMPNGSL-----EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+ L+++ + G L EK Y+ + ++ V A++YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH---D 134
Query: 534 TPMVHCDLKPNNIL---LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPEVLA 191
Query: 591 EGIISPKSDVYSYGIL 606
+ S D +S G++
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 93/228 (40%), Gaps = 37/228 (16%)
Query: 412 RATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH 470
R + F E +LG G+FG V K D AIK E+ S + SE +L S+ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLS-TILSEVXLLASLNH 61
Query: 471 -------------RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI 517
RN +K + + E+ N +L ++S N E +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK-------------- 563
+ AL Y+H S ++H +LKP NI +DE+ + DFG++K
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 564 -LLGEGDDSVIQTMTIATIGYMAPEY-GSEGIISPKSDVYSYGILLME 609
L G D+ T I T Y+A E G + K D YS GI+ E
Sbjct: 179 NLPGSSDN---LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 37/269 (13%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQ 450
+ + W+ L+I N F+ ++G G FG VY D G A+K +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-- 223
Query: 451 LERASRSFDSECEILRSIRHRNLIKIISN-------CCNIDFK-----ALVLEFMPNGSL 498
R + E L ++ R ++ ++S C + F + +L+ M G L
Sbjct: 224 ---KKRIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558
L H G+ ++ + L H H+ +V+ DLKP NILLDE+ +SD
Sbjct: 280 HYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD 335
Query: 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLME------TF 611
G++ + ++ T GYMAPE +G+ S D +S G +L + F
Sbjct: 336 LGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 612 TRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
+ K ++ I M+L V+ LPD +
Sbjct: 392 RQHKTKDKHEIDRMTLTMAVE--LPDSFS 418
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 37/269 (13%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQ 450
+ + W+ L+I N F+ ++G G FG VY D G A+K +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-- 223
Query: 451 LERASRSFDSECEILRSIRHRNLIKIISN-------CCNIDFK-----ALVLEFMPNGSL 498
R + E L ++ R ++ ++S C + F + +L+ M G L
Sbjct: 224 ---KKRIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558
L H G+ ++ + L H H+ +V+ DLKP NILLDE+ +SD
Sbjct: 280 HYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD 335
Query: 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLME------TF 611
G++ + ++ T GYMAPE +G+ S D +S G +L + F
Sbjct: 336 LGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 612 TRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
+ K ++ I M+L V+ LPD +
Sbjct: 392 RQHKTKDKHEIDRMTLTMAVE--LPDSFS 418
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 37/269 (13%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQ 450
+ + W+ L+I N F+ ++G G FG VY D G A+K +
Sbjct: 166 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-- 222
Query: 451 LERASRSFDSECEILRSIRHRNLIKIISN-------CCNIDFK-----ALVLEFMPNGSL 498
R + E L ++ R ++ ++S C + F + +L+ M G L
Sbjct: 223 ---KKRIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 278
Query: 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558
L H G+ ++ + L H H+ +V+ DLKP NILLDE+ +SD
Sbjct: 279 HYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD 334
Query: 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLME------TF 611
G++ + ++ T GYMAPE +G+ S D +S G +L + F
Sbjct: 335 LGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
Query: 612 TRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
+ K ++ I M+L V+ LPD +
Sbjct: 391 RQHKTKDKHEIDRMTLTMAVE--LPDSFS 417
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 113/269 (42%), Gaps = 37/269 (13%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQ 450
+ + W+ L+I N F+ ++G G FG VY D G A+K +
Sbjct: 167 ESDKFTRFCQWKNVE-LNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD-- 223
Query: 451 LERASRSFDSECEILRSIRHRNLIKIISN-------CCNIDFK-----ALVLEFMPNGSL 498
R + E L ++ R ++ ++S C + F + +L+ M G L
Sbjct: 224 ---KKRIKMKQGETL-ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDL 279
Query: 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558
L H G+ ++ + L H H+ +V+ DLKP NILLDE+ +SD
Sbjct: 280 HYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISD 335
Query: 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLME------TF 611
G++ + ++ T GYMAPE +G+ S D +S G +L + F
Sbjct: 336 LGLACDFSKKKPHA----SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
Query: 612 TRKKPTNEIFIGEMSLKHWVKESLPDGLT 640
+ K ++ I M+L V+ LPD +
Sbjct: 392 RQHKTKDKHEIDRMTLTMAVE--LPDSFS 418
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 421 NLLGTGSFGSVYKGTLFDGTN-VAIK-VFNLQLERASRSFDSECEILRSIRHRNLIKIIS 478
++LGTG+F V VAIK + LE S ++E +L I+H N++ +
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDD 83
Query: 479 NCCNIDFKALVLEFMPNGSL-----EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+ L+++ + G L EK Y+ + ++ V A++YLH
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGFYTER------DASRLIFQVLDAVKYLH---D 134
Query: 534 TPMVHCDLKPNNIL---LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH DLKP N+L LDE+ +SDFG+SK+ G SV+ T T GY+APE +
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPG--SVLST-ACGTPGYVAPEVLA 191
Query: 591 EGIISPKSDVYSYGIL 606
+ S D +S G++
Sbjct: 192 QKPYSKAVDCWSIGVI 207
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 11/189 (5%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEILRSIRHRNLIKIISN 479
+G G+F V + G VA+K+ + QL +S + E I++ + H N++K+
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539
LV+E+ G + +L +H + R V A++Y H +VH
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS-AVQYCHQKF---IVHR 130
Query: 540 DLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-YGSEGIISPKS 598
DLK N+LLD +M ++DFG S G+ + T + Y APE + + P+
Sbjct: 131 DLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAAPELFQGKKYDGPEV 187
Query: 599 DVYSYGILL 607
DV+S G++L
Sbjct: 188 DVWSLGVIL 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 96/225 (42%), Gaps = 19/225 (8%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF---- 447
D+ED ++ + T +IQR C +G G FG V++G N A+ V
Sbjct: 372 DEEDTYTMPS---TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 448 -NLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN 506
N + F E +R H +++K+I + +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK 485
Query: 507 YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566
+ L + + + AL YL S VH D+ N+L+ N + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM- 541
Query: 567 EGDDSVIQTMTIAT--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
+DS + I +MAPE + + SDV+ +G+ + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 26/213 (12%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWL---------YSHN------YFLGILERLNIMI 519
++ C + ++ E+ G L +L YS+N L + L+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
V + +L S +H D+ N+LL A + DFG+++ + + +++
Sbjct: 174 QVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 230
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + + +SDV+SYGILL E F+
Sbjct: 231 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
V +E+L S +H DL NILL EN + DFG+++ + + D V + T
Sbjct: 208 VARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLP 264
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + I S KSDV+SYG+LL E F+
Sbjct: 265 LKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 97/199 (48%), Gaps = 15/199 (7%)
Query: 423 LGTGSFG-SVYKGTLFDGTNVAIKVFNLQLERASRSFDS--ECEILRSIRHRNLIKIISN 479
+G GSFG ++ + DG IK N+ + +S E +L +++H N+++ +
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRES 91
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL----ERLNIMIDVGLALEYLHHGHSTP 535
+V+++ G L K + + G+L + L+ + + LAL+ H H
Sbjct: 92 FEENGSLYIVMDYCEGGDLFKRINAQK---GVLFQEDQILDWFVQICLALK---HVHDRK 145
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595
++H D+K NI L ++ T + DFGI+++L + + I T Y++PE +
Sbjct: 146 ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE--LARACIGTPYYLSPEICENKPYN 203
Query: 596 PKSDVYSYGILLMETFTRK 614
KSD+++ G +L E T K
Sbjct: 204 NKSDIWALGCVLYELCTLK 222
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 97/205 (47%), Gaps = 12/205 (5%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVF--NLQLERASRSFDSECEILRSI 468
++ + L+G GS+G V K D G VAIK F + + + E ++L+ +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW-LYSHNYFLGILERLNIMIDVGLALEY 527
RH NL+ ++ C LV EF+ + L+ L+ + ++++ I G+
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF-- 139
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
HS ++H D+KP NIL+ ++ + DFG ++ L + + +AT Y APE
Sbjct: 140 ---CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--VYDDEVATRWYRAPE 194
Query: 588 YGSEGIISPKS-DVYSYGILLMETF 611
+ K+ DV++ G L+ E F
Sbjct: 195 LLVGDVKYGKAVDVWAIGCLVTEMF 219
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 15/190 (7%)
Query: 423 LGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIIS 478
LG+G+FG V+ K T G K N + +E I+ + H LI +
Sbjct: 59 LGSGAFGVVHRCVEKAT---GRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHD 115
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
+ L+LEF+ G L + + +Y + E +N M A E L H H +VH
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM---RQACEGLKHMHEHSIVH 172
Query: 539 CDLKPNNILLDENMTAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
D+KP NI+ + + V DFG++ L + I +T AT + APE +
Sbjct: 173 LDIKPENIMCETKKASSVKIIDFGLATKLNPDE---IVKVTTATAEFAAPEIVDREPVGF 229
Query: 597 KSDVYSYGIL 606
+D+++ G+L
Sbjct: 230 YTDMWAIGVL 239
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
+LG G FG VY+G + NVA+K ++ F SE I++++ H +++K
Sbjct: 30 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+I + +++E P G L +L + L +L + + + A+ YL S
Sbjct: 90 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SIN 145
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + +
Sbjct: 146 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 596 PKSDVYSYGILLMETFT 612
SDV+ + + + E +
Sbjct: 205 TASDVWMFAVCMWEILS 221
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 24/211 (11%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH-------------NYFLGILERLNIMIDV 521
++ C + ++ E+ G L +L N L + L+ V
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
+ +L S +H D+ N+LL A + DFG+++ + + +++ +
Sbjct: 174 AQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+MAPE + + + +SDV+SYGILL E F+
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 102/237 (43%), Gaps = 19/237 (8%)
Query: 394 EDLLSLATWRRTSYLDIQRATNG---FNECNLLGTGSFGSVYKGTLFDGTNV----AIKV 446
E LL++ RT+ L G F +LGTG++G V+ G + A+KV
Sbjct: 30 EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 447 FN----LQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFK-ALVLEFMPNGSLEKW 501
+Q + + +E ++L IR + + + K L+L+++ G L
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 149
Query: 502 LYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561
L F + I VG + L H H +++ D+K NILLD N ++DFG+
Sbjct: 150 LSQRERFT----EHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGL 205
Query: 562 SKLLGEGDDSVIQTMTIATIGYMAPEY--GSEGIISPKSDVYSYGILLMETFTRKKP 616
SK D++ TI YMAP+ G + D +S G+L+ E T P
Sbjct: 206 SKEF-VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 15/209 (7%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFNLQLERASRSF-DSECEILRSIRHRN 472
F + +G GSFG V+KG D VAIK+ +L+ E +L
Sbjct: 25 FTKLERIGKGSFGEVFKG--IDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ K + +++E++ GS L + G + I + L+ L + H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLH 137
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
S +H D+K N+LL E ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 138 SEKKIHRDIKAANVLLSEQGDVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIQQ 194
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +++
Sbjct: 195 SAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFNLQLERASRSF-DSECEILRSIRHRN 472
F + +G GSFG V+KG D VAIK+ +L+ E +L
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ K + +++E++ GS L G L+ I + L+ L + H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 121
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
S +H D+K N+LL E+ ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIKQ 178
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +E+
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 15/209 (7%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFNLQLERASRSF-DSECEILRSIRHRN 472
F + +G GSFG V+KG D VAIK+ +L+ E +L
Sbjct: 29 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ K + +++E++ GS L G L+ I + L+ L + H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 141
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSE 591
S +H D+K N+LL E+ ++DFG++ G+ D+ I+ T + T +MAPE +
Sbjct: 142 SEKKIHRDIKAANVLLSEHGEVKLADFGVA---GQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 592 GIISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +E+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAI-KVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G+FG VYK + + +A KV + + E + E +IL S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILER----LNIMIDVGLALEYLHHGHSTPMV 537
+ +++EF G+++ + LER I + L+ L++ H ++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEY-----GS 590
H DLK NIL + ++DFG+S + IQ I T +MAPE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA----KNTRTIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEI 620
+ K+DV+S GI L+E + P +E+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+K+ + QL +S + E I+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV+E+ G + +L +H G ++ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GRMKEKEARAKFRQIV 123
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G+ + T + Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFD 459
T +IQR C +G G FG V++G N A+ V N + F
Sbjct: 7 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 64
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E +R H +++K+I + +++E G L +L Y L + +
Sbjct: 65 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 123
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+ AL YL S VH D+ N+L+ N + DFG+S+ + +DS +
Sbjct: 124 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKG 177
Query: 580 T--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
I +MAPE + + SDV+ +G+ + E
Sbjct: 178 KLPIKWMAPESINFRRFTSASDVWMFGVCMWE 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 10/200 (5%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
+LG G FG VY+G + NVA+K ++ F SE I++++ H +++K
Sbjct: 18 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+I + +++E P G L +L + L +L + + + A+ YL S
Sbjct: 78 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SIN 133
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + +
Sbjct: 134 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 596 PKSDVYSYGILLMETFTRKK 615
SDV+ + + + E + K
Sbjct: 193 TASDVWMFAVCMWEILSFGK 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFNLQLERASRSF-DSECEILRSIRHRN 472
F + +G GSFG V+KG D VAIK+ +L+ E +L
Sbjct: 24 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ K + +++E++ GS L G L+ I + L+ L + H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 136
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
S +H D+K N+LL E+ ++DFG++ L D + + + T +MAPE +
Sbjct: 137 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 194
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +E+
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFD 459
T +IQR C +G G FG V++G N A+ V N + F
Sbjct: 5 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 62
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E +R H +++K+I + +++E G L +L Y L + +
Sbjct: 63 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 121
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+ AL YL S VH D+ N+L+ N + DFG+S+ + +DS +
Sbjct: 122 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKG 175
Query: 580 T--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
I +MAPE + + SDV+ +G+ + E
Sbjct: 176 KLPIKWMAPESINFRRFTSASDVWMFGVCMWE 207
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 10/197 (5%)
Query: 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQLERASRS-FDSECEILRSIRHRNLIK 475
+LG G FG VY+G + NVA+K ++ F SE I++++ H +++K
Sbjct: 14 RILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+I + +++E P G L +L + L +L + + + A+ YL S
Sbjct: 74 LIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SIN 129
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595
VH D+ NIL+ + DFG+S+ + E +D ++T I +M+PE + +
Sbjct: 130 CVHRDIAVRNILVASPECVKLGDFGLSRYI-EDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 596 PKSDVYSYGILLMETFT 612
SDV+ + + + E +
Sbjct: 189 TASDVWMFAVCMWEILS 205
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 476 II------SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ ++ + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+K+ + QL +S + E I+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV+E+ G + +L +H G ++ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GRMKEKEARAKFRQIV 123
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G+ + T + Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFDSECE 463
+IQR C +G G FG V++G N A+ V N + F E
Sbjct: 34 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 91
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
+R H +++K+I + +++E G L +L Y L + + +
Sbjct: 92 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 150
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--I 581
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 151 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 204
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLME 609
+MAPE + + SDV+ +G+ + E
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWE 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFDSECE 463
+IQR C +G G FG V++G N A+ V N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
+R H +++K+I + +++E G L +L Y L + + +
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 122
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--I 581
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 176
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLME 609
+MAPE + + SDV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 11/207 (5%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSE 461
TS D Q + +G G+F V + G VA+K+ + QL S + E
Sbjct: 5 TSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFRE 64
Query: 462 CEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDV 521
I++ + H N++K+ LV+E+ G + +L +H R V
Sbjct: 65 VRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 124
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
A++Y H + +VH DLK N+LLD +M ++DFG S G+ + T +
Sbjct: 125 S-AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNK--LDTFC-GSP 177
Query: 582 GYMAPE-YGSEGIISPKSDVYSYGILL 607
Y APE + + P+ DV+S G++L
Sbjct: 178 PYAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFD 459
T +IQR C +G G FG V++G N A+ V N + F
Sbjct: 2 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 59
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E +R H +++K+I + +++E G L +L Y L + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 118
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+ AL YL S VH D+ N+L+ N + DFG+S+ + +DS +
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKG 172
Query: 580 T--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
I +MAPE + + SDV+ +G+ + E
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFD 459
T +IQR C +G G FG V++G N A+ V N + F
Sbjct: 4 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFL 61
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E +R H +++K+I + +++E G L +L Y L + +
Sbjct: 62 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAY 120
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+ AL YL S VH D+ N+L+ N + DFG+S+ + +DS +
Sbjct: 121 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKG 174
Query: 580 T--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
I +MAPE + + SDV+ +G+ + E
Sbjct: 175 KLPIKWMAPESINFRRFTSASDVWMFGVCMWE 206
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 125
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 183
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 184 GXKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAI-KVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G+FG VYK + + +A KV + + E + E +IL S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILER----LNIMIDVGLALEYLHHGHSTPMV 537
+ +++EF G+++ + LER I + L+ L++ H ++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEY-----GS 590
H DLK NIL + ++DFG+S + IQ I T +MAPE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDXFIGTPYWMAPEVVMCETSK 213
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEI 620
+ K+DV+S GI L+E + P +E+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 90/194 (46%), Gaps = 17/194 (8%)
Query: 423 LGTGSFGSVY-KGTLFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIRHRNLIKIISNC 480
LG+G+FG V+ G IK N + ++E E+L+S+ H N+IKI
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILER---LNIMIDVGLALEYLHHGHSTPMV 537
+ +V+E G L + + S L +M + AL Y H H +V
Sbjct: 90 EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VV 146
Query: 538 HCDLKPNNILLDENMTAH----VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
H DLKP NIL ++ + H + DFG+++L + S T T YMAPE
Sbjct: 147 HKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGTALYMAPEVFKRD- 201
Query: 594 ISPKSDVYSYGILL 607
++ K D++S G+++
Sbjct: 202 VTFKCDIWSAGVVM 215
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 23/210 (10%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAI-KVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G+FG VYK + + +A KV + + E + E +IL S H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILER----LNIMIDVGLALEYLHHGHSTPMV 537
+ +++EF G+++ + LER I + L+ L++ H ++
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVVCKQTLDALNYLHDNKII 157
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMAPEY-----GS 590
H DLK NIL + ++DFG+S + IQ I T +MAPE
Sbjct: 158 HRDLKAGNILFTLDGDIKLADFGVSA----KNTRXIQRRDSFIGTPYWMAPEVVMCETSK 213
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEI 620
+ K+DV+S GI L+E + P +E+
Sbjct: 214 DRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GXKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 13/208 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFNLQLERASRSF-DSECEILRSIRHRN 472
F + +G GSFG V+KG D VAIK+ +L+ E +L
Sbjct: 9 FTKLEKIGKGSFGEVFKG--IDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+ K + +++E++ GS L G L+ I + L+ L + H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLH 121
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
S +H D+K N+LL E+ ++DFG++ L D + + + T +MAPE +
Sbjct: 122 SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +E+
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 117
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLAL 525
++ C + ++ E+ G L +L L + + L+ V +
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+L S +H D+ N+LL A + DFG+++ + + +++ + +MA
Sbjct: 166 AFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 222
Query: 586 PEYGSEGIISPKSDVYSYGILLMETFT 612
PE + + + +SDV+SYGILL E F+
Sbjct: 223 PESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 122
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 180
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 181 GCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 72 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 125
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 126 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 183
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 184 GCKYYSTAV-----DIWSLGCIFAEMVTRR 208
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFDSECE 463
+IQR C +G G FG V++G N A+ V N + F E
Sbjct: 3 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL 60
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
+R H +++K+I + +++E G L +L Y L + + +
Sbjct: 61 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLST 119
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--I 581
AL YL S VH D+ N+L+ N + DFG+S+ + +DS + I
Sbjct: 120 ALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 173
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLME 609
+MAPE + + SDV+ +G+ + E
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWE 201
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 96/197 (48%), Gaps = 17/197 (8%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILR-SIRHRNLIKIISN 479
++LG G+ G++ +FD +VA+K L D E ++LR S H N+I+
Sbjct: 30 DVLGHGAEGTIVYRGMFDNRDVAVKRI---LPECFSFADREVQLLRESDEHPNVIRYFCT 86
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539
+ F+ + +E +L++++ ++ LE + ++ L +LH S +VH
Sbjct: 87 EKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHR 142
Query: 540 DLKPNNILLDE-----NMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGI 593
DLKP+NIL+ + A +SDFG+ K L G S + + T G++APE SE
Sbjct: 143 DLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDC 202
Query: 594 ISPKS---DVYSYGILL 607
+ D++S G +
Sbjct: 203 KENPTYTVDIFSAGCVF 219
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 119
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 177
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 101/210 (48%), Gaps = 18/210 (8%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNV--AIKVFNLQLERASRSFDSECEIL-RSIRH 470
T+G+ +G GS+ SV K + TN+ A+K+ ++++ R E EIL R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N+I + + + +V E M G L + +F E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFF-SEREASAVLFTITKTVEYLH- 133
Query: 531 GHSTPMVHCDLKPNNIL-LDEN---MTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ +VH DLKP+NIL +DE+ + + DFG +K L ++ ++ T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 189
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E D++S G+LL T P
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 117
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 11/207 (5%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN--VAIKVFNLQLERASRSF-DSECEILRSIRHRNL 473
F + + +G GSFG VYKG + + T VAIK+ +L+ E +L +
Sbjct: 21 FTKLDRIGKGSFGEVYKG-IDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYI 79
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+ + +++E++ GS L G LE I + L+ L + HS
Sbjct: 80 TRYFGSYLKSTKLWIIMEYLGGGSALDLLKP-----GPLEETYIATILREILKGLDYLHS 134
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
+H D+K N+LL E ++DFG++ L D + + + T +MAPE +
Sbjct: 135 ERKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKRNXFVGTPFWMAPEVIKQSA 192
Query: 594 ISPKSDVYSYGILLMETFTRKKPTNEI 620
K+D++S GI +E + P +++
Sbjct: 193 YDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 411 QRATNGF---NECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDSECEILR 466
Q A N F ++ +LG G FG V+K G +A K+ + + +E ++
Sbjct: 82 QGAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMN 141
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALE 526
+ H NLI++ + + LV+E++ G L + +Y L L+ + M + E
Sbjct: 142 QLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQI---CE 198
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVS--DFGISKLLGEGDDSVIQTMTIATIGYM 584
+ H H ++H DLKP NIL + DFG+++ + + T ++
Sbjct: 199 GIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKV---NFGTPEFL 255
Query: 585 APEYGSEGIISPKSDVYSYGIL 606
APE + +S +D++S G++
Sbjct: 256 APEVVNYDFVSFPTDMWSVGVI 277
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533
+K++ + LV EF+ + L+K++ + + GI L I + L+ L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDA-SALTGIPLPL-IKSYLFQLLQGLSFCHS 121
Query: 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE------ 587
++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 122 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILLGCK 179
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 YYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 417 FNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI------- 468
F L+G G++G VYKG + G AIKV ++ + D E EI + I
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDV-------TGDEEEEIKQEINMLKKYS 78
Query: 469 RHRNLIK-----IISNCCNIDFK-ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVG 522
HRN+ I N +D + LV+EF GS+ + N L+ I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICR 136
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT-IATI 581
L L H H ++H D+K N+LL EN + DFG+S L D +V + T I T
Sbjct: 137 EILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL---DRTVGRRNTFIGTP 193
Query: 582 GYMAPEY-----GSEGIISPKSDVYSYGILLME 609
+MAPE + KSD++S GI +E
Sbjct: 194 YWMAPEVIACDENPDATYDFKSDLWSLGITAIE 226
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 20/207 (9%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---------LGILERLNIMIDVGLAL 525
++ C + ++ E+ G L +L L + + L+ V +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+L S +H D+ N+LL A + DFG+++ + + +++ + +MA
Sbjct: 174 AFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMA 230
Query: 586 PEYGSEGIISPKSDVYSYGILLMETFT 612
PE + + + +SDV+SYGILL E F+
Sbjct: 231 PESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 227
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 228 IFGATDYTS-SIDVWSAGCVLAE 249
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 96
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 155
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 156 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 212
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 213 IFGATDYTS-SIDVWSAGCVLAE 234
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 206 IFGATDYTS-SIDVWSAGCVLAE 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 85
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 144
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 145 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 201
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 202 IFGATDYTS-SIDVWSAGCVLAE 223
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+++ + QL +S + E I+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIM 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV+E+ G + +L +H G ++ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GRMKEKEARAKFRQIV 123
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G+ + T + Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDTFC-GSPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V T G VA+K +L+ ++ +E I+R H N++ + S+
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
D +V+EF+ G+L + +H + + + + V AL YL H+ ++H D+
Sbjct: 113 VGDELWVVMEFLEGGALTD-IVTHTR-MNEEQIATVCLSVLRALSYL---HNQGVIHRDI 167
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K ++ILL + +SDFG + + + + + T +MAPE S + D++
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSK--EVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
Query: 602 SYGILLMETFTRKKPT-NEIFIGEMSLKHWVKESLPDGLTEV----------VDANLVRE 650
S GI+++E + P NE + M +++SLP + ++ +D LVRE
Sbjct: 226 SLGIMVIEMIDGEPPYFNEPPLQAMRR---IRDSLPPRVKDLHKVSSVLRGFLDLMLVRE 282
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 148
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 149 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 205
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 206 IFGATDYTS-SIDVWSAGCVLAE 227
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LGTG+FG V++ T G N A K E + E + + +RH L+ +
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 118
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH-------HGHST 534
+ + ++ EFM G L F + + N M + A+EY+ H H
Sbjct: 119 DDNEMVMIYEFMSGGEL---------FEKVADEHNKMSE-DEAVEYMRQVCKGLCHMHEN 168
Query: 535 PMVHCDLKPNNILLDENMTAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
VH DLKP NI+ + + DFG++ L D +T T + APE
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 593 IISPKSDVYSYGIL 606
+ +D++S G+L
Sbjct: 226 PVGYYTDMWSVGVL 239
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 88/203 (43%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+K+ + QL +S + E I+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV+E+ G + +L +H G ++ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GRMKEKEARAKFRQIV 123
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G+ Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DAFCGAPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 113
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 172
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 173 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 229
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 230 IFGATDYTS-SIDVWSAGCVLAE 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 105
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 164
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 165 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 221
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 222 IFGATDYTS-SIDVWSAGCVLAE 243
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 170
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 171 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 227
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 228 IFGATDYTS-SIDVWSAGCVLAE 249
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 115
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 174
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 175 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 231
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 232 IFGATDYTS-SIDVWSAGCVLAE 253
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 78
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 137
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 138 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 194
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 195 IFGATDYTS-SIDVWSAGCVLAE 216
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 89/212 (41%), Gaps = 16/212 (7%)
Query: 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF-----NLQLERASRSFD 459
T +IQR C +G G FG V++G N A+ V N + F
Sbjct: 2 TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFL 59
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E +R H +++K+I + +++E G L +L + L + +
Sbjct: 60 QEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAY 118
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
+ AL YL S VH D+ N+L+ N + DFG+S+ + +DS +
Sbjct: 119 QLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKG 172
Query: 580 T--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
I +MAPE + + SDV+ +G+ + E
Sbjct: 173 KLPIKWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 81
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 141 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 197
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 198 IFGATDYTS-SIDVWSAGCVLAE 219
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 23/194 (11%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LGTG+FG V++ T G N A K E + E + + +RH L+ +
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFE 224
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH-------HGHST 534
+ + ++ EFM G L F + + N M + A+EY+ H H
Sbjct: 225 DDNEMVMIYEFMSGGEL---------FEKVADEHNKMSE-DEAVEYMRQVCKGLCHMHEN 274
Query: 535 PMVHCDLKPNNILLDENMTAHVS--DFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
VH DLKP NI+ + + DFG++ L D +T T + APE
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHL---DPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 593 IISPKSDVYSYGIL 606
+ +D++S G+L
Sbjct: 332 PVGYYTDMWSVGVL 345
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 82
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 141
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 142 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 198
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 199 IFGATDYTS-SIDVWSAGCVLAE 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 90
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 149
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 150 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 206
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 207 IFGATDYTS-SIDVWSAGCVLAE 228
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 23/227 (10%)
Query: 407 YLDIQRATNGFNECNLLGT-GSFGSVYKGTLFDGTNVAI-KVFNLQLERASRSFDSECEI 464
Y + R N + ++G G FG VYK + + +A KV + + E + E +I
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERL----NIMID 520
L S H N++K++ + +++EF G+++ + LER I +
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLE-------LERPLTESQIQVV 113
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--I 578
L+ L++ H ++H DLK NIL + ++DFG+S + + IQ I
Sbjct: 114 CKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS---AKNTRTXIQRRDSFI 170
Query: 579 ATIGYMAPEY-----GSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620
T +MAPE + K+DV+S GI L+E + P +E+
Sbjct: 171 GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 95/225 (42%), Gaps = 19/225 (8%)
Query: 392 DQEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVF---- 447
D+ED ++ + T +IQR C +G G FG V++G N A+ V
Sbjct: 372 DEEDTYTMPS---TRDYEIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTC 426
Query: 448 -NLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN 506
N + F E +R H +++K+I + +++E G L +L
Sbjct: 427 KNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRK 485
Query: 507 YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566
+ L + + + AL YL S VH D+ N+L+ + DFG+S+ +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM- 541
Query: 567 EGDDSVIQTMTIAT--IGYMAPEYGSEGIISPKSDVYSYGILLME 609
+DS + I +MAPE + + SDV+ +G+ + E
Sbjct: 542 --EDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE 584
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 156
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 215
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 216 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 272
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 273 IFGATDYTS-SIDVWSAGCVLAE 294
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 69 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 122
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 180
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 181 GCKYYSTAV-----DIWSLGCIFAEMVTRR 205
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 120
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 178
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 102/203 (50%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + R + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 117
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 175
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 120
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 178
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 117
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 175
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 8/195 (4%)
Query: 423 LGTGSFGSV-YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GS G V G VA+K+ +L+ ++ +E I+R +H N++++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ +++EF+ G+L + L I L+ L + H+ ++H D+
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVR-----LNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 542 KPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVY 601
K ++ILL + +SDFG + + D + + T +MAPE S + + + D++
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISK--DVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
Query: 602 SYGILLMETFTRKKP 616
S GI+++E + P
Sbjct: 226 SLGIMVIEMVDGEPP 240
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 120
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 178
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 119
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 177
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 119
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 177
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 119
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 177
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL---------ERASRSFDSECEILRS 467
F +LG G +G V++ G N K+F +++ + + +E IL
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
++H ++ +I L+LE++ G L L F+ + ++ +AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH +++ DLKP NI+L+ ++DFG+ K D + TI YMAPE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHXFCGTIEYMAPE 191
Query: 588 YGSEGIISPKSDVYSYGILLMETFT---------RKKPTNEIFIGEMSLKHWVKESLPDG 638
+ D +S G L+ + T RKK ++I +++L ++ + D
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 639 LTEVVDAN 646
L +++ N
Sbjct: 252 LKKLLKRN 259
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+++ + QL +S + E I+
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIM 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV+E+ G + +L +H G ++ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH----GRMKEKEARAKFRQIV 123
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G+ + Y A
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKL---DEFCGSPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 25/248 (10%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL---------ERASRSFDSECEILRS 467
F +LG G +G V++ G N K+F +++ + + +E IL
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTG-KIFAMKVLKKAMIVRNAKDTAHTKAERNILEE 77
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
++H ++ +I L+LE++ G L L F+ + ++ +AL +
Sbjct: 78 VKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACF-YLAEISMALGH 136
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH +++ DLKP NI+L+ ++DFG+ K D + TI YMAPE
Sbjct: 137 LHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCK--ESIHDGTVTHTFCGTIEYMAPE 191
Query: 588 YGSEGIISPKSDVYSYGILLMETFT---------RKKPTNEIFIGEMSLKHWVKESLPDG 638
+ D +S G L+ + T RKK ++I +++L ++ + D
Sbjct: 192 ILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDL 251
Query: 639 LTEVVDAN 646
L +++ N
Sbjct: 252 LKKLLKRN 259
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 9 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 60
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 61 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 115
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 116 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 172
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T T+ T Y+APE + D ++ G+L+ E
Sbjct: 173 FAKRVKG------RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T T+ T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRVKG------RTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHFAM 71
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 72 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-- 128
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 129 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 184 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHFAM 71
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 72 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-- 128
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 129 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 184 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VAIK+ + QL S + E I+
Sbjct: 6 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM 65
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ L++E+ G + +L +H G ++ +
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIV 121
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+ + H +VH DLK N+LLD +M ++DFG S G + T + Y A
Sbjct: 122 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG--GKLDTFC-GSPPYAA 178
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 179 PELFQGKKYDGPEVDVWSLGVIL 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+ L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+ L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 117
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y APE
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRAPEILL 175
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 176 GCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHFAM 71
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 72 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-- 128
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 129 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 183
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 184 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 406 SYLDIQRAT-NGFNECNLLGTGSFGSV------YKGTLFDGTNVAIKVFNLQLERASRSF 458
+L+ Q T N F + +LG G FG V G ++ + K + A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL- 232
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
+E +IL + R ++ + D LVL M G L+ +Y H G E +
Sbjct: 233 -NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPEARAVF 290
Query: 519 --IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576
++ LE LH +V+ DLKP NILLD++ +SD G++ + EG QT+
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-----QTI 342
Query: 577 T--IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ T+GYMAPE + D ++ G LL E + P +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+K++ + L +++ + GLA
Sbjct: 66 VKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 119
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 177
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 178 GCKYYSTAV-----DIWSLGCIFAEMVTRR 202
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 406 SYLDIQRAT-NGFNECNLLGTGSFGSV------YKGTLFDGTNVAIKVFNLQLERASRSF 458
+L+ Q T N F + +LG G FG V G ++ + K + A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMAL- 232
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
+E +IL + R ++ + D LVL M G L+ +Y H G E +
Sbjct: 233 -NEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY-HMGQAGFPEARAVF 290
Query: 519 --IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576
++ LE LH +V+ DLKP NILLD++ +SD G++ + EG QT+
Sbjct: 291 YAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-----QTI 342
Query: 577 T--IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ T+GYMAPE + D ++ G LL E + P +
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 16 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 64
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 65 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 121
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 122 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 176
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 177 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 109/232 (46%), Gaps = 39/232 (16%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 44 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 92
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 93 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 149
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 150 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 204
Query: 558 DFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 205 DFGFAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 24 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 72
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 73 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 129
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 130 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 185 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 24 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 72
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 73 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 129
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 130 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 185 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 176 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 224
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 225 QVSLKDQIT 233
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVP-ATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SXICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 105/226 (46%), Gaps = 28/226 (12%)
Query: 421 NLLGTGSFGSVYKGTLFD-GTNVAIKVFN-LQLERASRSFDSECEILRSIRHRNLIKI-- 476
++LG G+ +V++G G AIKVFN + R E E+L+ + H+N++K+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLY--SHNYFLGILERLNIMIDVGLALEYLHHGHST 534
I K L++EF P GSL L S+ Y L E L ++ DV + ++H
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV---VGGMNHLREN 131
Query: 535 PMVHCDLKPNNILL----DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH ++KP NI+ D ++DFG ++ L E D+ + YG+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVXL------------YGT 178
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP 636
E + P D+Y +L + + T +++ ++ H SLP
Sbjct: 179 EEYLHP--DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 24 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 72
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 73 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 129
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 130 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 184
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 185 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 25/257 (9%)
Query: 382 RHRNRSTKDGDQEDLLSLATWRRTSYL---DIQRATNGFNECNLLGTGSFGSVYKGTLFD 438
R R S K D E +L + Y ++ AT+ LG GSFG V++ + D
Sbjct: 42 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--MED 95
Query: 439 ---GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495
G A+K L++ RA C L S R ++ + + + +E +
Sbjct: 96 KQTGFQCAVKKVRLEVFRAEELM--ACAGLTSPR---IVPLYGAVREGPWVNIFMELLEG 150
Query: 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT-A 554
GSL + + G L + +G ALE L + HS ++H D+K +N+LL + + A
Sbjct: 151 GSLGQLVKEQ----GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA 206
Query: 555 HVSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETF 611
+ DFG + L G G D + T +MAPE K DV+S +++
Sbjct: 207 ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 266
Query: 612 TRKKPTNEIFIGEMSLK 628
P + F G + LK
Sbjct: 267 NGCHPWTQFFRGPLCLK 283
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 109/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 16 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 64
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E++P G +
Sbjct: 65 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-- 121
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 122 --FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVT 176
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 177 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 223
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 110/254 (43%), Gaps = 19/254 (7%)
Query: 429 GSVYKGTLFDGTNVAIKVFNLQ--LERASRSFDSECEILRSIRHRNLIKIISNCCN--ID 484
G ++KG + G ++ +KV ++ R SR F+ EC LR H N++ ++ C +
Sbjct: 24 GELWKGR-WQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP 82
Query: 485 FKALVLEFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKP 543
L+ + P GSL L+ N+ + + + +D +LH H L
Sbjct: 83 HPTLITHWXPYGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFLHTLEPLIPRHA-LNS 141
Query: 544 NNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSY 603
++ +DE+ TA +S + S + A + A + E +D +S+
Sbjct: 142 RSVXIDEDXTARISXADVKFSF----QSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSF 197
Query: 604 GILLMETFTRKKPTNEIFIGEMSLK---HWVKESLPDGLTEVVDANLVR----EEQAFSV 656
+LL E TR+ P ++ E+ K ++ ++P G++ V + L + E+ A
Sbjct: 198 AVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHV-SKLXKICXNEDPAKRP 256
Query: 657 KIDCLLSIMHLALD 670
K D ++ I+ D
Sbjct: 257 KFDXIVPILEKXQD 270
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 176 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 224
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 225 QVSLKDQIT 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISN 479
+G G+F V + L G A K+ N + R + + E I R ++H N++++ +
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539
F LV + + G L + + + Y+ + + LE + H H +VH
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAVLHCHQMGVVHR 127
Query: 540 DLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
DLKP N+LL + ++DFG++ + +GD T GY++PE +
Sbjct: 128 DLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPEVLRKEAYGK 185
Query: 597 KSDVYSYGILL 607
D+++ G++L
Sbjct: 186 PVDIWACGVIL 196
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 62 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 119
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 120 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 174
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 175 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 223
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 224 QVSLKDQIT 232
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 202 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 259
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 260 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLMRT 314
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 315 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 363
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 364 QVSLKDQIT 372
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 63 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 120
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 121 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 175
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 176 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 224
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 225 QVSLKDQIT 233
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 69 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 126
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 127 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE--TSLMRT 181
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 182 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 230
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 231 QVSLKDQIT 239
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VAIK+ + QL S + E I+
Sbjct: 9 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIM 68
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ L++E+ G + +L +H G ++ +
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH----GRMKEKEARSKFRQIV 124
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG--- 582
+ + H +VH DLK N+LLD +M ++DFG S ++ + A G
Sbjct: 125 SAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS------NEFTVGGKLDAFCGAPP 178
Query: 583 YMAPE-YGSEGIISPKSDVYSYGILL 607
Y APE + + P+ DV+S G++L
Sbjct: 179 YAAPELFQGKKYDGPEVDVWSLGVIL 204
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 99/210 (47%), Gaps = 18/210 (8%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFDGTN--VAIKVFNLQLERASRSFDSECEIL-RSIRH 470
T+G+ +G GS+ SV K + TN A+K+ ++++ R E EIL R +H
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKI----IDKSKRDPTEEIEILLRYGQH 75
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N+I + + + +V E G L + +F E ++ + +EYLH
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFF-SEREASAVLFTITKTVEYLH- 133
Query: 531 GHSTPMVHCDLKPNNIL-LDEN---MTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ +VH DLKP+NIL +DE+ + + DFG +K L ++ ++ T T ++AP
Sbjct: 134 --AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL-RAENGLLXT-PCYTANFVAP 189
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E D++S G+LL T P
Sbjct: 190 EVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 29/212 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIISNC 480
+G G +G V+ G + G VA+KVF E AS + E EI +++ RH N++ I+
Sbjct: 45 IGKGRYGEVWMGK-WRGEKVAVKVF-FTTEEAS--WFRETEIYQTVLMRHENILGFIAA- 99
Query: 481 CNIDFKA--------LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA---LEYLH 529
D K L+ ++ NGSL +L S + +L GL E
Sbjct: 100 ---DIKGTGSWTQLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS-KLLGEGDDSVIQTMT-IATIGYMAPE 587
+ H DLK NIL+ +N T ++D G++ K + + ++ I T + T YM PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
Query: 588 YGSEGIISPK------SDVYSYGILLMETFTR 613
E + +D+YS+G++L E R
Sbjct: 217 VLDESLNRNHFQSYIMADMYSFGLILWEVARR 248
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 94/189 (49%), Gaps = 25/189 (13%)
Query: 459 DSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
++E EIL+ + H +IKI N + + +VLE M G L + + +L
Sbjct: 188 ETEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKL-YF 245
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQT 575
+ LA++YLH ++H DLKP N+LL +E+ ++DFG SK+LGE S+++T
Sbjct: 246 YQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGET--SLMRT 300
Query: 576 MTIATIGYMAPE----YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ T Y+APE G+ G + D +S G++L + P +E H
Sbjct: 301 LC-GTPTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPPFSE---------HRT 349
Query: 632 KESLPDGLT 640
+ SL D +T
Sbjct: 350 QVSLKDQIT 358
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F +GTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E+MP G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 414 TNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRH 470
T+ + LG G+F V + + G A K+ N + R + + E I R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++++ + F LV + + G L + + + Y+ + + LE ++H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVNH 118
Query: 531 GHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
H +VH DLKP N+LL + ++DFG++ + +GD T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 588 YGSEGIISPKSDVYSYGILL 607
+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F +GTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E+MP G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNL-QLERASRSFDSECEILRSIR 469
R F LG G FG V++ D N AIK L E A E + L +
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 470 HRNLIKIISNCCNID------------FKALVLEFMPNGSLEKWLYSHNYFLGILER--- 514
H +++ + + + + ++ +L+ W+ N I ER
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGRCTIEERERS 118
Query: 515 --LNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL--GEGDD 570
L+I + + A+E+LH S ++H DLKP+NI + V DFG+ + E +
Sbjct: 119 VCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 175
Query: 571 SVIQTM--------TIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+V+ M + T YM+PE S K D++S G++L E
Sbjct: 176 TVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 421 NLLGTGSFGSVYKGTLFD-GTNVAIKVFN-LQLERASRSFDSECEILRSIRHRNLIKI-- 476
++LG G+ +V++G G AIKVFN + R E E+L+ + H+N++K+
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFA 74
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLY--SHNYFLGILERLNIMIDVGLALEYLHHGHST 534
I K L++EF P GSL L S+ Y L E L ++ DV + +L
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHL---REN 131
Query: 535 PMVHCDLKPNNILL----DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
+VH ++KP NI+ D ++DFG ++ L E D+ + YG+
Sbjct: 132 GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVSL------------YGT 178
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP 636
E + P D+Y +L + + T +++ ++ H SLP
Sbjct: 179 EEYLHP--DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+ ++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 91/200 (45%), Gaps = 12/200 (6%)
Query: 414 TNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRH 470
T+ + LG G+F V + + G A K+ N + R + + E I R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++++ + F LV + + G L + + + Y+ + + LE ++H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIQQILESVNH 118
Query: 531 GHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
H +VH DLKP N+LL + ++DFG++ + +GD T GY++PE
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQQAWFGFA-GTPGYLSPE 176
Query: 588 YGSEGIISPKSDVYSYGILL 607
+ D+++ G++L
Sbjct: 177 VLRKDPYGKPVDMWACGVIL 196
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 101/203 (49%), Gaps = 19/203 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
+ + ++G GSFG VY+ L D G VAIK ++ + + E +I+R + H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQGKAFKNRELQIMRKLDHCNIVR 77
Query: 476 I----ISNCCNID--FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ S+ D + LVL+++P ++ + ++ L + + + + L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLA 136
Query: 530 HGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ HS + H D+KP N+LLD + + DFG +K L G+ +V I + Y APE
Sbjct: 137 YIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV---SYICSRYYRAPEL 193
Query: 588 -YGSEGIISPKSDVYSYGILLME 609
+G+ S DV+S G +L E
Sbjct: 194 IFGATDYTS-SIDVWSAGCVLAE 215
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTN----VAIKVF-NLQLERASRSFDSECE 463
+IQR C +G G FG V++G N VAIK N + F E
Sbjct: 6 EIQRERIELGRC--IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL 63
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
+R H +++K+I + +++E G L +L + L + + +
Sbjct: 64 TMRQFDHPHIVKLIGVITE-NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLST 122
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT--I 581
AL YL S VH D+ N+L+ + DFG+S+ + +DS + I
Sbjct: 123 ALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYM---EDSTYYKASKGKLPI 176
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLME 609
+MAPE + + SDV+ +G+ + E
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWE 204
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 107/229 (46%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 131 SHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 18/201 (8%)
Query: 423 LGTGSFGSVY----KGTLFDGTNVAIKV-FNLQLER--ASRSFDSECEILRSIRHRNLIK 475
LG G FG+VY K + F VA+KV F Q+E+ E EI + H N+++
Sbjct: 31 LGKGKFGNVYLAREKKSHF---IVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILR 87
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ + + L+LE+ P G L K L F IM ++ AL Y H
Sbjct: 88 LYNYFYDRRRIYLILEYAPRGELYKELQKSCTF-DEQRTATIMEELADALMYCH---GKK 143
Query: 536 MVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595
++H D+KP N+LL ++DFG S S+ + T+ Y+ PE + +
Sbjct: 144 VIHRDIKPENLLLGLKGELKIADFGWSV----HAPSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 596 PKSDVYSYGILLMETFTRKKP 616
K D++ G+L E P
Sbjct: 200 EKVDLWCIGVLCYELLVGNPP 220
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+ ++ + L +++ + GLA
Sbjct: 65 VKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF----- 118
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 176
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 177 GCKYYSTAV-----DIWSLGCIFAEMVTRR 201
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRSFDSECEILRSIRHRNLIKII 477
N +G GS+G V K + GT + A K+ +E R F E EI++S+ H N+I++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 72
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ LV+E G L + + H + IM DV A+ Y H + +
Sbjct: 73 ETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN---VA 128
Query: 538 HCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGII 594
H DLKP N L + + DFG++ G + + T Y++P+ EG+
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGLY 184
Query: 595 SPKSDVYSYGILL 607
P+ D +S G+++
Sbjct: 185 GPECDEWSAGVMM 197
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 98/220 (44%), Gaps = 33/220 (15%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFD------SECEILRSI-RHRNLI 474
LG G+FG V + T F G A+ +++ +++ D SE +I+ + +H N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSH-NYFLG---------------------IL 512
++ C + ++ E+ G L +L LG +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
+ L+ V + +L S +H D+ N+LL A + DFG+++ + + +
Sbjct: 159 DLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
++ + +MAPE + + + +SDV+SYGILL E F+
Sbjct: 216 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 16/193 (8%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRSFDSECEILRSIRHRNLIKII 477
N +G GS+G V K + GT + A K+ +E R F E EI++S+ H N+I++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDR-FKQEIEIMKSLDHPNIIRLY 89
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ LV+E G L + + H + IM DV A+ Y H + +
Sbjct: 90 ETFEDNTDIYLVMELCTGGELFERVV-HKRVFRESDAARIMKDVLSAVAYCHKLN---VA 145
Query: 538 HCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGII 594
H DLKP N L + + DFG++ G + + T Y++P+ EG+
Sbjct: 146 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---MMRTKVGTPYYVSPQV-LEGLY 201
Query: 595 SPKSDVYSYGILL 607
P+ D +S G+++
Sbjct: 202 GPECDEWSAGVMM 214
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 97/201 (48%), Gaps = 18/201 (8%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNV--AIKVFNLQLERASRSFDSECEIL-RSIRH 470
++G+ +G GS+ S K + TN+ A+KV ++++ R E EIL R +H
Sbjct: 26 SDGYVVKETIGVGSY-SECKRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQH 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N+I + + LV E M G L + +F E ++ +G +EYLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF-SEREASFVLHTIGKTVEYLH- 138
Query: 531 GHSTPMVHCDLKPNNIL-LDENMTAH---VSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
S +VH DLKP+NIL +DE+ + DFG +K L ++ ++ T T ++AP
Sbjct: 139 --SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 194
Query: 587 EYGSEGIISPKSDVYSYGILL 607
E D++S GILL
Sbjct: 195 EVLKRQGYDEGCDIWSLGILL 215
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 24 KEDFLK--KWESPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHKET---GNHYAM 72
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E IL+++ L+K+ + + +V+E+ P G +
Sbjct: 73 KILDKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-- 129
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+++D+ V+
Sbjct: 130 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVT 184
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 185 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 410 IQRATNGFNE----CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNLQLERASRSFDS--- 460
+Q +T F++ +LG GSFG V K + G A+KV + + + +S
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 98
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N++K+ + + LV E G L + S F + + I+
Sbjct: 99 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 157
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + Y+H +VH DLKP N+LL+ ++ + DFG+S + S
Sbjct: 158 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDK 211
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILL 607
I T Y+APE G K DV+S G++L
Sbjct: 212 IGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 240
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+ ++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 410 IQRATNGFNE----CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNLQLERASRSFDS--- 460
+Q +T F++ +LG GSFG V K + G A+KV + + + +S
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 99
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N++K+ + + LV E G L + S F + + I+
Sbjct: 100 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 158
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + Y+H +VH DLKP N+LL+ ++ + DFG+S + S
Sbjct: 159 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDK 212
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILL 607
I T Y+APE G K DV+S G++L
Sbjct: 213 IGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 241
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL-GILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 185
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 186 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 239
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 240 THYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV EF+ + L+ ++ + L +++ + GLA
Sbjct: 67 VKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF----- 120
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 178
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 179 GCKYYSTAV-----DIWSLGCIFAEMVTRR 203
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 25/210 (11%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF---LGILERLNIMIDVGLALEYLHH 530
+K++ + LV E + + L+K++ + L +++ + GLA
Sbjct: 68 VKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF----- 121
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--- 587
HS ++H DLKP N+L++ ++DFG+++ G + + T+ Y APE
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXH--EVVTLWYRAPEILL 179
Query: 588 ---YGSEGIISPKSDVYSYGILLMETFTRK 614
Y S + D++S G + E TR+
Sbjct: 180 GCKYYSTAV-----DIWSLGCIFAEMVTRR 204
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 19/207 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRS----FDSECEILRSIRHRNLIKII- 477
+G GSF +VYKG L T V + LQ + ++S F E E L+ ++H N+++
Sbjct: 34 IGRGSFKTVYKG-LDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
Query: 478 ---SNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHGHS 533
S LV E +G+L+ +L + +L I GL ++LH +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGL--QFLH-TRT 149
Query: 534 TPMVHCDLKPNNILLD-ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
P++H DLK +NI + + + D G++ L + I T + APE E
Sbjct: 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPEXYEEK 205
Query: 593 IISPKSDVYSYGILLMETFTRKKPTNE 619
DVY++G +E T + P +E
Sbjct: 206 -YDESVDVYAFGXCXLEXATSEYPYSE 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNV--AIKVFNLQLERASRSFDSECEIL-RSIRH 470
++G+ +G GS+ K + TN+ A+KV ++++ R E EIL R +H
Sbjct: 26 SDGYVVKETIGVGSYSEC-KRCVHKATNMEYAVKV----IDKSKRDPSEEIEILLRYGQH 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N+I + + LV E M G L + +F E ++ +G +EYLH
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFF-SEREASFVLHTIGKTVEYLH- 138
Query: 531 GHSTPMVHCDLKPNNIL-LDENMTAH---VSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
S +VH DLKP+NIL +DE+ + DFG +K L ++ ++ T T ++AP
Sbjct: 139 --SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQL-RAENGLLMT-PCYTANFVAP 194
Query: 587 EYGSEGIISPKSDVYSYGILL 607
E D++S GILL
Sbjct: 195 EVLKRQGYDEGCDIWSLGILL 215
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 14/226 (6%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 126
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGIS-KLLGEGDDSVIQTMTIATIGYMAPEYGS 590
H ++H D+KP+NIL++ + DFG+S +L+ E + + T + YM+PE
Sbjct: 127 HK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRS-----YMSPERLQ 179
Query: 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP 636
S +SD++S G+ L+E + P + I E+ L + V E P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYPRPPMAIFEL-LDYIVNEPPP 224
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQLERASRSFD---SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS 504
+ Q + + +E IL+++ L+K+ + + +V+E+ P G + +S
Sbjct: 75 DKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FS 130
Query: 505 HNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561
H +G + + L EYLH S +++ DLKP N+++D+ V+DFG+
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGL 187
Query: 562 SKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 188 AKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 95/200 (47%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K++++
Sbjct: 32 IGSGAQGIVVAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G+++ E
Sbjct: 198 LGMGYKENVDIWSVGVIMGE 217
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E+ P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 410 IQRATNGFNE----CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNLQLERASRSFDS--- 460
+Q +T F++ +LG GSFG V K + G A+KV + + + +S
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 81
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N++K+ + + LV E G L + S F + + I+
Sbjct: 82 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 140
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + Y+H +VH DLKP N+LL+ ++ + DFG+S + S
Sbjct: 141 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDK 194
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILL 607
I T Y+APE G K DV+S G++L
Sbjct: 195 IGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA-TIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T +A T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLAGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 117
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 173
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + T T+ T
Sbjct: 174 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA------TWTLCGTPE 224
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 423 LGTGSFG----SVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKI 476
LG G+F V+K T G A K+ N + R + + E I R ++H N++++
Sbjct: 37 LGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 93
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ F LV + + G L + + + ++ + + LE + + HS +
Sbjct: 94 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGI 149
Query: 537 VHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH +LKP N+LL + ++DFG++ E +DS T GY++PE +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 206
Query: 594 ISPKSDVYSYGILL 607
S D+++ G++L
Sbjct: 207 YSKPVDIWACGVIL 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTN-VAIKVFNLQL--ERASRSFDSECEILRSI 468
R T+ + LG G+F V + T A K+ N + R + + E I R +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
+H N++++ + F LV + + G L + + + Y+ + + LE +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYY----SEADASHCIHQILESV 143
Query: 529 HHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+H H +VH DLKP N+LL + ++DFG++ + +G+ T GY++
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGEQQAWFGFA-GTPGYLS 201
Query: 586 PEYGSEGIISPKSDVYSYGILL 607
PE + D+++ G++L
Sbjct: 202 PEVLRKDPYGKPVDIWACGVIL 223
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 150
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 151 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 204
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 205 THYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 21/210 (10%)
Query: 410 IQRATNGFNE----CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNLQLERASRSFDS--- 460
+Q +T F++ +LG GSFG V K + G A+KV + + + +S
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N++K+ + + LV E G L + S F + + I+
Sbjct: 76 EVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + Y+H +VH DLKP N+LL+ ++ + DFG+S + S
Sbjct: 135 VLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKMKDK 188
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILL 607
I T Y+APE G K DV+S G++L
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 217
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 25/257 (9%)
Query: 382 RHRNRSTKDGDQEDLLSLATWRRTSYL---DIQRATNGFNECNLLGTGSFGSVYKGTLFD 438
R R S K D E +L + Y ++ AT+ LG GSFG V++ + D
Sbjct: 61 RSREPSPKTEDNEGVLLTEKLKPVDYEYREEVHWATHQLR----LGRGSFGEVHR--MED 114
Query: 439 ---GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495
G A+K L++ RA C L S R ++ + + + +E +
Sbjct: 115 KQTGFQCAVKKVRLEVFRAEELM--ACAGLTSPR---IVPLYGAVREGPWVNIFMELLEG 169
Query: 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT-A 554
GSL + + G L + +G ALE L + HS ++H D+K +N+LL + + A
Sbjct: 170 GSLGQLVKEQ----GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA 225
Query: 555 HVSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETF 611
+ DFG + L G G + T +MAPE K DV+S +++
Sbjct: 226 ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHML 285
Query: 612 TRKKPTNEIFIGEMSLK 628
P + F G + LK
Sbjct: 286 NGCHPWTQFFRGPLCLK 302
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F +GTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTIGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFL-GILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 22/217 (10%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIK---VFNLQLERASRSFDSECEI---- 464
AT+ + +G G++G+VYK G VA+K V N + E+
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 465 -LRSIRHRNLIKIISNCC----NIDFKA-LVLEFMPNGSLEKWLYSHNYFLGILERL-NI 517
L + H N+++++ C + + K LV E + + L +L E + ++
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
M L++LH + +VH DLKP NIL+ T ++DFG++++ + T
Sbjct: 126 MRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALTPV 179
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
+ T+ Y APE + + D++S G + E F RK
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAI 444
+ED L W + T++LD F LGTGSFG V +K T G + A+
Sbjct: 24 KEDFLK--KWESPAQNTAHLD------QFERIRTLGTGSFGRVMLVKHKET---GNHYAM 72
Query: 445 KVFNLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500
K+ + Q L++ + + E I +++ L+K+ + + +VLE+ P G +
Sbjct: 73 KILDKQKVVKLKQIEHTLN-EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM-- 129
Query: 501 WLYSHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557
+SH +G + + L EYLH S +++ DLKP N+L+D+ V+
Sbjct: 130 --FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVA 184
Query: 558 DFGISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
DFG +K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 185 DFGFAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIIS 478
L+G G FG VY G VAI++ +++ E ++F E R RH N++ +
Sbjct: 39 ELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMG 96
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
C + A++ +L + L + + I ++ + YL H+ ++H
Sbjct: 97 ACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAKGILH 153
Query: 539 CDLKPNNILLDENMTAHVSDFG---ISKLLGEG---DDSVIQT-----MTIATIGYMAPE 587
DLK N+ D N ++DFG IS +L G D IQ + I ++P+
Sbjct: 154 KDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 588 YGSEGI-ISPKSDVYSYGILLMETFTRKKP 616
+ + S SDV++ G + E R+ P
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 142
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 143 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 196
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 197 THYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + + LG G+ G V+K + G +A K+ +L+++ A R E ++L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GL YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLT--YLREK 123
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YM+PE
Sbjct: 124 HK--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMSPERLQG 177
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 178 THYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQLERASRSFD---SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS 504
+ Q + + +E IL+++ L+K+ + + +V+E+ P G + +S
Sbjct: 75 DKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----FS 130
Query: 505 HNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561
H +G + + L EYLH S +++ DLKP N+++D+ V+DFG+
Sbjct: 131 HLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGL 187
Query: 562 SKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 188 AKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E+ P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 11/205 (5%)
Query: 415 NGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR-SFDSECEILRSIRHRN 472
+ F + LG G+ G V K G +A K+ +L+++ A R E ++L
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHG 531
++ + ++ +E M GSL++ L IL +++I + GLA YL
Sbjct: 76 IVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLA--YLREK 133
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
H ++H D+KP+NIL++ + DFG+S G+ DS+ + + T YMAPE
Sbjct: 134 HQ--IMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSF-VGTRSYMAPERLQG 187
Query: 592 GIISPKSDVYSYGILLMETFTRKKP 616
S +SD++S G+ L+E + P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 35/215 (16%)
Query: 417 FNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNL 473
F + +G G++G VYK G VA+K L + E + E +L+ + H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 474 IKIISNCCNIDFKALVLE--------FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+K++ + LV E FM +L L +++ + GLA
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQDLKTFMDASALT------GIPLPLIKSYLFQLLQGLAF 117
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
HS ++H DLKP N+L++ ++DFG+++ G + T + T+ Y A
Sbjct: 118 -----CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLWYRA 170
Query: 586 PE------YGSEGIISPKSDVYSYGILLMETFTRK 614
PE Y S + D++S G + E TR+
Sbjct: 171 PEILLGCKYYSTAV-----DIWSLGCIFAEMVTRR 200
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 42/229 (18%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL----ERASRS----FDSE 461
+Q ++ ++G G+FG V + KV+ ++L E RS F E
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQ----LVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEE 125
Query: 462 CEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL----------EKWLYSHNYFLGI 511
+I+ ++++ + + +V+E+MP G L EKW +
Sbjct: 126 RDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYT----- 180
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
+V LAL+ +H S ++H D+KP+N+LLD++ ++DFG + E
Sbjct: 181 -------AEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET-GM 229
Query: 572 VIQTMTIATIGYMAPEY----GSEGIISPKSDVYSYGILLMETFTRKKP 616
V + T Y++PE G +G + D +S G+ L E P
Sbjct: 230 VHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP 278
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 33/203 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K++++
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIK-------KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I L+ F P SLE+ + Y + L N+ + + L++
Sbjct: 83 KNII---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E D++S G+++ E
Sbjct: 195 EVILGMGYKENVDIWSVGVIMGE 217
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E+ P G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 130 SHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 83
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 139
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+DE V+DFG +K + +T + T
Sbjct: 140 TFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG------RTWXLCGTPE 190
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYE 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 19/194 (9%)
Query: 423 LGTGSFG----SVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKI 476
LG G+F V+K T G A K+ N + R + + E I R ++H N++++
Sbjct: 14 LGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ F LV + + G L + + + ++ + + LE + + HS +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGI 126
Query: 537 VHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH +LKP N+LL + ++DFG++ E +DS T GY++PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAI---EVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 594 ISPKSDVYSYGILL 607
S D+++ G++L
Sbjct: 184 YSKPVDIWACGVIL 197
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + D V+E+ G L L F R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH S +V+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPE 175
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D + G+++ E + P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 423 LGTGSFG----SVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKI 476
LG G+F V+K T G A K+ N + R + + E I R ++H N++++
Sbjct: 14 LGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 70
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ F LV + + G L + + + ++ + + LE + + HS +
Sbjct: 71 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGI 126
Query: 537 VHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH +LKP N+LL + ++DFG L E +DS T GY++PE +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 183
Query: 594 ISPKSDVYSYGILL 607
S D+++ G++L
Sbjct: 184 YSKPVDIWACGVIL 197
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQ--LERASRSFDSECEILR--- 466
AT+ + +G G++G+VYK G VA+K + E S E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 467 SIRHRNLIKIISNCC----NIDFKA-LVLEFMPNGSLEKWL-YSHNYFLGILERLNIMID 520
+ H N+++++ C + + K LV E + + L +L + L ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
L++LH + +VH DLKP NIL+ T ++DFG++++ + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALAPVVVT 174
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 64
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + D V+E+ G L L F R ++ ALEY
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 123
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH S +V+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 124 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPE 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D + G+++ E + P
Sbjct: 179 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS----ECEILRSIRHRNLIKIIS 478
+G G++G VYK G A+K ++LE+ S E IL+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
LV E + + L+K L + G LE + + L + + H ++H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY--GSEGIISP 596
DLKP N+L++ ++DFG+++ G T I T+ Y AP+ GS+ S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWYRAPDVLMGSKK-YST 180
Query: 597 KSDVYSYGILLME 609
D++S G + E
Sbjct: 181 TIDIWSVGCIFAE 193
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 409 DIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASRSFDSECEI 464
D++ + ++G G+FG V +K T + F + S F E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL----------EKWLYSHNYFLGILER 514
+ ++++ + + +V+E+MP G L EKW +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-------- 179
Query: 515 LNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS-KLLGEGDDSVI 573
+V LAL+ +H S +H D+KP+N+LLD++ ++DFG K+ EG V
Sbjct: 180 ----AEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVR 230
Query: 574 QTMTIATIGYMAPEY----GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ T Y++PE G +G + D +S G+ L E P
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 96/202 (47%), Gaps = 25/202 (12%)
Query: 423 LGTGSFGSVYKGTLFDG-TNVAIKVF-------------NLQLERASRSFDSECEILRSI 468
LG+G++G V +G + AIKV N +E+ +E +L+S+
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
H N+IK+ + + LV EF G L + + + + F + NIM + + YL
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF-DECDAANIMKQILSGICYL 162
Query: 529 HHGHSTPMVHCDLKPNNILLDEN---MTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
H + +VH D+KP NILL+ + + DFG+S + D ++ + T Y+A
Sbjct: 163 HKHN---IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK--DYKLRD-RLGTAYYIA 216
Query: 586 PEYGSEGIISPKSDVYSYGILL 607
PE + + K DV+S G+++
Sbjct: 217 PEVLKKK-YNEKCDVWSCGVIM 237
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + D V+E+ G L L F R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH S +V+ D+K N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKTFC-GTPEYLAPE 175
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D + G+++ E + P
Sbjct: 176 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 409 DIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASRSFDSECEI 464
D++ + ++G G+FG V +K T + F + S F E +I
Sbjct: 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 122
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL----------EKWLYSHNYFLGILER 514
+ ++++ + + +V+E+MP G L EKW +
Sbjct: 123 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-------- 174
Query: 515 LNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS-KLLGEGDDSVI 573
+V LAL+ +H S +H D+KP+N+LLD++ ++DFG K+ EG V
Sbjct: 175 ----AEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVR 225
Query: 574 QTMTIATIGYMAPEY----GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ T Y++PE G +G + D +S G+ L E P
Sbjct: 226 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 272
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 19/194 (9%)
Query: 423 LGTGSFG----SVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKI 476
LG G+F V+K T G A K+ N + R + + E I R ++H N++++
Sbjct: 13 LGKGAFSVVRRCVHKTT---GLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRL 69
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPM 536
+ F LV + + G L + + + ++ + + LE + + HS +
Sbjct: 70 HDSIQEESFHYLVFDLVTGGELFEDIVAREFY----SEADASHCIQQILESIAYCHSNGI 125
Query: 537 VHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI 593
VH +LKP N+LL + ++DFG L E +DS T GY++PE +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFG---LAIEVNDSEAWHGFAGTPGYLSPEVLKKDP 182
Query: 594 ISPKSDVYSYGILL 607
S D+++ G++L
Sbjct: 183 YSKPVDIWACGVIL 196
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLC 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 99/211 (46%), Gaps = 37/211 (17%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGY 583
EYLH S +++ DLKP N+L+D+ V+DFG +K ++ T G
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR--------VKGRTWXLCG- 200
Query: 584 MAPEYGSEGIISPKS-----DVYSYGILLME 609
PEY + II K D ++ G+L+ E
Sbjct: 201 -TPEYLAPAIILSKGYNKAVDWWALGVLIYE 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 409 DIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASRSFDSECEI 464
D++ + ++G G+FG V +K T + F + S F E +I
Sbjct: 68 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDI 127
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL----------EKWLYSHNYFLGILER 514
+ ++++ + + +V+E+MP G L EKW +
Sbjct: 128 MAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYT-------- 179
Query: 515 LNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS-KLLGEGDDSVI 573
+V LAL+ +H S +H D+KP+N+LLD++ ++DFG K+ EG V
Sbjct: 180 ----AEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--MVR 230
Query: 574 QTMTIATIGYMAPEY----GSEGIISPKSDVYSYGILLMETFTRKKP 616
+ T Y++PE G +G + D +S G+ L E P
Sbjct: 231 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTP 277
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 67/137 (48%), Gaps = 9/137 (6%)
Query: 516 NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575
I + + ALE+LH S ++H D+KP+N+L++ + DFGIS L DSV +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DSVAKT 211
Query: 576 MTIATIGYMAPEYGSEGI----ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ YMAPE + + S KSD++S GI ++E + P + LK V
Sbjct: 212 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 271
Query: 632 KESLPDGLTEVVDANLV 648
+E P + A V
Sbjct: 272 EEPSPQLPADKFSAEFV 288
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 76 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLX 130
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 187
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS----ECEILRSIRHRNLIKIIS 478
+G G++G VYK G A+K ++LE+ S E IL+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
LV E + + L+K L + G LE + + L + + H ++H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY--GSEGIISP 596
DLKP N+L++ ++DFG+++ G T + T+ Y AP+ GS+ S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKK-YST 180
Query: 597 KSDVYSYGILLME 609
D++S G + E
Sbjct: 181 TIDIWSVGCIFAE 193
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGY 583
EYLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXLX----GTPEY 204
Query: 584 MAPEYGSEGIISPKSDVYSYGILLME 609
+APE + D ++ G+L+ E
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQ--LERASRSFDSECEILR--- 466
AT+ + +G G++G+VYK G VA+K + E S E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 467 SIRHRNLIKIISNCC----NIDFKA-LVLEFMPNGSLEKWLYSHNYFLGILERL-NIMID 520
+ H N+++++ C + + K LV E + + L +L E + ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
L++LH + +VH DLKP NIL+ T ++DFG++++ + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALDPVVVT 174
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS----ECEILRSIRHRNLIKIIS 478
+G G++G VYK G A+K ++LE+ S E IL+ ++H N++K+
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALK--KIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
LV E + + L+K L + G LE + + L + + H ++H
Sbjct: 68 VIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY--GSEGIISP 596
DLKP N+L++ ++DFG+++ G T + T+ Y AP+ GS+ S
Sbjct: 124 RDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWYRAPDVLMGSKK-YST 180
Query: 597 KSDVYSYGILLME 609
D++S G + E
Sbjct: 181 TIDIWSVGCIFAE 193
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 18/217 (8%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---S 460
+D + N F+ LLG G+FG V K T G A+K+ ++ A +
Sbjct: 3 MDPKVTMNDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVT 59
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +L++ RH L + D V+E+ G L L F R +
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAE 118
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIA 579
+ ALEYLH S +V+ D+K N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCG 172
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKP 616
T Y+APE + D + G+++ E + P
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 93/202 (46%), Gaps = 19/202 (9%)
Query: 421 NLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIIS 478
++LG G+ V L A+K+ Q E E+L + HRN++++I
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
D LV E M GS+ ++ +F LE ++ DV AL++LH + + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQDVASALDFLH---NKGIAH 134
Query: 539 CDLKPNNILLD---ENMTAHVSDFGI-SKLLGEGDDSVIQTMTIAT----IGYMAPE--- 587
DLKP NIL + + + DFG+ S + GD S I T + T YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 588 -YGSEG-IISPKSDVYSYGILL 607
+ E I + D++S G++L
Sbjct: 195 AFSEEASIYDKRCDLWSLGVIL 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 85/203 (41%), Gaps = 11/203 (5%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFN-LQLERAS-RSFDSECEIL 465
D Q + +G G+F V + G VA+K+ + QL +S + E I
Sbjct: 8 DEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIX 67
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
+ + H N++K+ LV E+ G + +L +H R V A+
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS-AV 126
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
+Y H +VH DLK N+LLD + ++DFG S G+ Y A
Sbjct: 127 QYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKL---DAFCGAPPYAA 180
Query: 586 PE-YGSEGIISPKSDVYSYGILL 607
PE + + P+ DV+S G++L
Sbjct: 181 PELFQGKKYDGPEVDVWSLGVIL 203
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILR- 466
L I+ F +LG GSFG V+ F TN + L+ + D EC ++
Sbjct: 11 LQIKLKIEDFELHKMLGKGSFGKVFLAE-FKKTNQFFAIKALKKDVVLMDDDVECTMVEK 69
Query: 467 -----SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI-D 520
+ H L + + V+E++ G L + S + F L R +
Sbjct: 70 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAE 127
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK--LLGEGDDSVIQTMTI 578
+ L L++LH S +V+ DLK +NILLD++ ++DFG+ K +LG+ +
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEF----C 180
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKP 616
T Y+APE + D +S+G+LL E + P
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 87/189 (46%), Gaps = 15/189 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTN--VAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
LG G+ VY+ GT A+KV +++ + +E +L + H N+IK+
Sbjct: 61 LGRGATSIVYRCKQ-KGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIF 117
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+LVLE + G L + Y+ ER + V LE + + H +VH D
Sbjct: 118 ETPTEISLVLELVTGGELFDRIVEKGYYS---ER-DAADAVKQILEAVAYLHENGIVHRD 173
Query: 541 LKPNNILLDE---NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
LKP N+L + ++DFG+SK++ + V+ T GY APE P+
Sbjct: 174 LKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKTVCGTPGYCAPEILRGCAYGPE 230
Query: 598 SDVYSYGIL 606
D++S GI+
Sbjct: 231 VDMWSVGII 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 423 LGTGSFGSVYKGTL-FDGTNVAIK----VFNLQLERASRSFDSECEILRSIRHRNLIKII 477
+G G++G V G VAIK F++ + A R+ E +IL+ +H N+I I
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFKHDNIIAIK 120
Query: 478 S----NCCNIDFKAL--VLEFMPNGSLEKWLYSHN--------YFLGILERLNIMIDVGL 523
+FK++ VL+ M L + ++S YFL L R
Sbjct: 121 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLR--------- 170
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL--GEGDDSVIQTMTIATI 581
L+Y+H S ++H DLKP+N+L++EN + DFG+++ L + T +AT
Sbjct: 171 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 227
Query: 582 GYMAPEYG-SEGIISPKSDVYSYGILLMETFTRKK 615
Y APE S + D++S G + E R++
Sbjct: 228 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 18/207 (8%)
Query: 411 QRATNGFNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECE 463
Q+ + ++ LG+G F V K G A K + RASR + E
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL 523
ILR + H N+I + N L+LE + G L +L + L E + + +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL-AQKESLSEEEATSFIKQILD 126
Query: 524 ALEYLHHGHSTPMVHCDLKPNNI-LLDENM-TAHVS--DFGISKLLGEGDDSVIQTMTIA 579
+ YLH + + H DLKP NI LLD+N+ H+ DFG++ E +D V
Sbjct: 127 GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---EIEDGVEFKNIFG 180
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGIL 606
T ++APE + + ++D++S G++
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVI 207
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 37/215 (17%)
Query: 423 LGTGSFGSVYKGTL-FDGTNVAIK----VFNLQLERASRSFDSECEILRSIRHRNLIKII 477
+G G++G V G VAIK F++ + A R+ E +IL+ +H N+I I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDV-VTNAKRTL-RELKILKHFKHDNIIAIK 119
Query: 478 S----NCCNIDFKAL--VLEFMPNGSLEKWLYSHN--------YFLGILERLNIMIDVGL 523
+FK++ VL+ M L + ++S YFL L R
Sbjct: 120 DILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLR--------- 169
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL--GEGDDSVIQTMTIATI 581
L+Y+H S ++H DLKP+N+L++EN + DFG+++ L + T +AT
Sbjct: 170 GLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATR 226
Query: 582 GYMAPEYG-SEGIISPKSDVYSYGILLMETFTRKK 615
Y APE S + D++S G + E R++
Sbjct: 227 WYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 417 FNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDS-----ECEILRSIRH 470
+N +LG GSFG V K A+KV N + ++++ D+ E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDH 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++K+ + +V E G L + F + I+ V + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF-SEHDAARIIKQVFSGITYMHK 139
Query: 531 GHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE 193
Query: 588 YGSEGIISPKSDVYSYGILL 607
G K DV+S G++L
Sbjct: 194 V-LRGTYDEKCDVWSAGVIL 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 12/191 (6%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISN 479
LG G+F V + + G A K+ N + R + + E I R ++H N++++ +
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539
L+ + + G L + + + Y+ + + LE + H H +VH
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAVLHCHQMGVVHR 145
Query: 540 DLKPNNILLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
DLKP N+LL + ++DFG++ + EG+ T GY++PE +
Sbjct: 146 DLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA-GTPGYLSPEVLRKDPYGK 203
Query: 597 KSDVYSYGILL 607
D+++ G++L
Sbjct: 204 PVDLWACGVIL 214
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 95/210 (45%), Gaps = 21/210 (10%)
Query: 410 IQRATNGFNE----CNLLGTGSFGSVY--KGTLFDGTNVAIKVFNLQLERASRSFDS--- 460
+Q +T F++ +LG GSFG V K + G A+KV + + + +S
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLR 75
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E ++L+ + H N+ K+ + + LV E G L + S F + + I+
Sbjct: 76 EVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-DAARIIRQ 134
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + Y H +VH DLKP N+LL+ ++ + DFG+S + S
Sbjct: 135 VLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF---EASKKXKDK 188
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILL 607
I T Y+APE G K DV+S G++L
Sbjct: 189 IGTAYYIAPEV-LHGTYDEKCDVWSTGVIL 217
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
+ +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 121 ---KNIISLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 232
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 19/214 (8%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQ--LERASRSFDSECEILR--- 466
AT+ + +G G++G+VYK G VA+K + E S E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 467 SIRHRNLIKIISNCC----NIDFKA-LVLEFMPNGSLEKWLYSHNYFLGILERL-NIMID 520
+ H N+++++ C + + K LV E + + L +L E + ++M
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
L++LH + +VH DLKP NIL+ T ++DFG++++ + + T
Sbjct: 121 FLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY---QMALFPVVVT 174
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
+ Y APE + + D++S G + E F RK
Sbjct: 175 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 91
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVL 147
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 148 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 198
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYE 225
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L K+ + + +V+E+ P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 97
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 153
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 204
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 84 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 195
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 31 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 82 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 136
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 137 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 193
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 194 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 235
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L K+ + + +V+E+ P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 131 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 77 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 188
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATWRRTSYLDIQRATNGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFN 448
+ED L W S Q + F+ LGTGSFG V +K + G + A+K+ +
Sbjct: 44 KEDFLK--KWETPSQNTAQ--LDQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILD 96
Query: 449 LQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS 504
Q L++ + + E IL+++ L+K+ + + +V+E++ G + +S
Sbjct: 97 KQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FS 151
Query: 505 HNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561
H +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 152 HLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGF 208
Query: 562 SKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 209 AKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 251
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFAEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 18/210 (8%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + D V+E+ G L L F R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAP 586
LH S +V+ D+K N++LD++ ++DFG+ K EG D T Y+AP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E + D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 26 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 77 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 131
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 132 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 188
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 189 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 230
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL--ERASRSFDSECEILR- 466
RA + +G G++G V+K G VA+K +Q E S E +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 467 --SIRHRNLIKIISNCC--NIDFKA---LVLEFMPNGSLEKWLYSHNYFLGILERL-NIM 518
+ H N++++ C D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
+ L++LH S +VH DLKP NIL+ + ++DFG++++ + T +
Sbjct: 127 FQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
T+ Y APE + + D++S G + E F RK
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 99/206 (48%), Gaps = 27/206 (13%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGY 583
EYLH S +++ DLKP N+L+D+ V+DFG +K + +G + T Y
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV-KGRTWXL----CGTPEY 204
Query: 584 MAPEYGSEGIISPKSDVYSYGILLME 609
+APE + D ++ G+L+ E
Sbjct: 205 LAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 33/229 (14%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 24 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 75
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L K+ + + +V+E+ P G + +
Sbjct: 76 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM----F 130
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+++D+ V+DFG
Sbjct: 131 SHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFG 187
Query: 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +G + T Y+APE + D ++ G+L+ E
Sbjct: 188 FAKRV-KGRTWXL----CGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFXEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 83 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 236
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 33 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 84 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 138
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 139 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 195
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 196 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 237
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 36/224 (16%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIK--------VFNLQLERASRSFDSECEI 464
++ F +LLG G++G V T G VAIK +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 465 LRSIRHRNLIKIIS-----NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
L+ +H N+I I + + N + ++ E M L + + + +L +I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ-----MLSDDHIQY 116
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE--GDDSVI---- 573
+ L + H + ++H DLKP+N+L++ N V DFG+++++ E D+S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 574 --QTMTIATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRK 614
T +AT Y APE + S DV+S G +L E F R+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 70 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 121 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 175
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 232
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 233 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 274
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 19/218 (8%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILR- 466
L I+ F +LG GSFG V+ F TN + L+ + D EC ++
Sbjct: 10 LQIKLKIEDFILHKMLGKGSFGKVFLAE-FKKTNQFFAIKALKKDVVLMDDDVECTMVEK 68
Query: 467 -----SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI-D 520
+ H L + + V+E++ G L + S + F L R +
Sbjct: 69 RVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF--DLSRATFYAAE 126
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK--LLGEGDDSVIQTMTI 578
+ L L++LH S +V+ DLK +NILLD++ ++DFG+ K +LG+ +
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXF----C 179
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKP 616
T Y+APE + D +S+G+LL E + P
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 37/226 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K +++
Sbjct: 25 IGSGAQGIVCAAYDAVL--DRNVAIK-------KLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 76 KNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLC 130
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 131 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAP 187
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
E D++S G ++ E K +F G + W K
Sbjct: 188 EVILGMGYKENVDIWSVGCIMGEMVRHKI----LFPGRDYIDQWNK 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 16/236 (6%)
Query: 393 QEDLLSLATWRR--TSYLDIQR-ATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFN 448
++++L W + TS + R F ++G G+FG V L + V A+K+ N
Sbjct: 49 EKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN 108
Query: 449 L--QLERASRS-FDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSH 505
L+RA + F E ++L + + + + + + LV+++ G L L
Sbjct: 109 KWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKF 168
Query: 506 NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565
L + ++ +A++ +H H VH D+KP+NIL+D N ++DFG L
Sbjct: 169 EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 566 GEGDDSVIQTMTIATIGYMAPEY-----GSEGIISPKSDVYSYGILLMETFTRKKP 616
E D +V ++ + T Y++PE G +G P+ D +S G+ + E + P
Sbjct: 226 ME-DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 89/210 (42%), Gaps = 18/210 (8%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + D V+E+ G L L F R ++ ALEY
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARF-YGAEIVSALEY 120
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAP 586
LH S +V+ D+K N++LD++ ++DFG+ K EG D T Y+AP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E + D + G+++ E + P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 35/230 (15%)
Query: 393 QEDLLSLATW----RRTSYLDIQRATNGFNECNLLGTGSFGSVY-KGTLFDGTNVAIKVF 447
+ED L W + T++LD F LGTGSFG V + G + A+K+
Sbjct: 23 KEDFLK--KWENPAQNTAHLD------QFERIKTLGTGSFGRVMLVKHMETGNHYAMKIL 74
Query: 448 NLQ----LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLY 503
+ Q L++ + + E IL+++ L+K+ + + +V+E++ G + +
Sbjct: 75 DKQKVVKLKQIEHTLN-EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----F 129
Query: 504 SHNYFLGILERLNIMI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560
SH +G + + L EYLH S +++ DLKP N+L+D+ V+DFG
Sbjct: 130 SHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFG 186
Query: 561 ISKLLGEGDDSVIQTMTI-ATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+K + +T + T Y+APE + D ++ G+L+ E
Sbjct: 187 FAKRVKG------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYE 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLG-----ILERLN 516
+L+ ++H N+I ++ F P SLE++ +Y + +G I++
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 517 IMIDVGLALEY-----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
+ D L Y L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 36/224 (16%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIK--------VFNLQLERASRSFDSECEI 464
++ F +LLG G++G V T G VAIK +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 465 LRSIRHRNLIKIIS-----NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
L+ +H N+I I + + N + ++ E M L + + + +L +I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ-----MLSDDHIQY 116
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE--GDDSVI---- 573
+ L + H + ++H DLKP+N+L++ N V DFG+++++ E D+S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 574 --QTMTIATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRK 614
T +AT Y APE + S DV+S G +L E F R+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
H + ++H D+KP+NILLD + + DFGIS G+ DS+ +T YMAPE
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS---GQLVDSIAKTRDAGCRPYMAPER 196
Query: 589 ----GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644
S +SDV+S GI L E T G W S+ D LT+VV
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELAT----------GRFPYPKW--NSVFDQLTQVVK 244
Query: 645 ANLVR----EEQAFS 655
+ + EE+ FS
Sbjct: 245 GDPPQLSNSEEREFS 259
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 20/211 (9%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F+ LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQN 61
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM-IDVGLALE 526
RH L + D V+E+ G L L F ER ++ ALE
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTE--ERARFYGAEIVSALE 119
Query: 527 YLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMA 585
YLH S +V+ D+K N++LD++ ++DFG+ K EG D T Y+A
Sbjct: 120 YLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLA 173
Query: 586 PEYGSEGIISPKSDVYSYGILLMETFTRKKP 616
PE + D + G+++ E + P
Sbjct: 174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K++++
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIK-------KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I L+ F P SLE+ + Y + L N+ + + L++
Sbjct: 83 KNII---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLV 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E D++S G ++ E
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGE 217
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL--ERASRSFDSECEILR- 466
RA + +G G++G V+K G VA+K +Q E S E +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 467 --SIRHRNLIKIISNCC--NIDFKA---LVLEFMPNGSLEKWLYSHNYFLGILERL-NIM 518
+ H N++++ C D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
+ L++LH S +VH DLKP NIL+ + ++DFG++++ + T +
Sbjct: 127 FQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
T+ Y APE + + D++S G + E F RK
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 33/203 (16%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN 479
+G+G+ G V Y L NVAIK + SR F ++ R+ R L+K++++
Sbjct: 32 IGSGAQGIVCAAYDAIL--ERNVAIK-------KLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------------ 527
I L+ F P SLE+ + Y + L N+ + + L++
Sbjct: 83 KNII---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLC 137
Query: 528 -LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAP 586
+ H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y AP
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAP 194
Query: 587 EYGSEGIISPKSDVYSYGILLME 609
E D++S G ++ E
Sbjct: 195 EVILGMGYKENVDIWSVGCIMGE 217
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 20/216 (9%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL--ERASRSFDSECEILR- 466
RA + +G G++G V+K G VA+K +Q E S E +LR
Sbjct: 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRH 67
Query: 467 --SIRHRNLIKIISNCC--NIDFKA---LVLEFMPNGSLEKWLYSHNYFLGILERL-NIM 518
+ H N++++ C D + LV E + + L +L E + ++M
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMM 126
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
+ L++LH S +VH DLKP NIL+ + ++DFG++++ + T +
Sbjct: 127 FQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVV 180
Query: 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614
T+ Y APE + + D++S G + E F RK
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+++D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ E
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYE 230
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 423 LGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRN 472
LG+G F V KGT G A K + +SR + E ILR IRH N
Sbjct: 34 LGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPN 90
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+I + N L+LE + G L +L + L E + + L+ +H+ H
Sbjct: 91 IITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQI---LDGVHYLH 146
Query: 533 STPMVHCDLKPNNI-LLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
S + H DLKP NI LLD+N+ + DFGI+ + G++ T ++APE
Sbjct: 147 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 203
Query: 589 GSEGIISPKSDVYSYGIL 606
+ + ++D++S G++
Sbjct: 204 VNYEPLGLEADMWSIGVI 221
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 78
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDE 183
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 184 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 92/210 (43%), Gaps = 17/210 (8%)
Query: 415 NGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSEC-----EILRSI 468
+ F +LG GSFG V + + G A+KV L+ + + D EC IL
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKV--LKKDVILQDDDVECTMTEKRILSLA 80
Query: 469 RHRNLIKIISNCCNI-DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
R+ + + C D V+EF+ G L + F R ++ AL +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARF-YAAEIISALMF 139
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIGYMAP 586
LH +++ DLK +N+LLD ++DFG+ K EG + + T T T Y+AP
Sbjct: 140 LH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAP 193
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E E + P D ++ G+LL E P
Sbjct: 194 EILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 417 FNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDS-----ECEILRSIRH 470
+N +LG GSFG V K A+KV N + ++++ D+ E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDH 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++K+ + +V E G L + F + I+ V + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF-SEHDAARIIKQVFSGITYMHK 139
Query: 531 GHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE 193
Query: 588 YGSEGIISPKSDVYSYGILL 607
G K DV+S G++L
Sbjct: 194 V-LRGTYDEKCDVWSAGVIL 212
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 84
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 85 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 132
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDE 189
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 190 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 423 LGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRN 472
LG+G F V KGT G A K + +SR + E ILR IRH N
Sbjct: 13 LGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 69
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+I + N L+LE + G L +L + L E + + L+ +H+ H
Sbjct: 70 IITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQI---LDGVHYLH 125
Query: 533 STPMVHCDLKPNNI-LLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
S + H DLKP NI LLD+N+ + DFGI+ + G++ T ++APE
Sbjct: 126 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 182
Query: 589 GSEGIISPKSDVYSYGIL 606
+ + ++D++S G++
Sbjct: 183 VNYEPLGLEADMWSIGVI 200
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 91/200 (45%), Gaps = 20/200 (10%)
Query: 417 FNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDS-----ECEILRSIRH 470
+N +LG GSFG V K A+KV N + ++++ D+ E E+L+ + H
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDH 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
N++K+ + +V E G L + F + I+ V + Y+H
Sbjct: 81 PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRF-SEHDAARIIKQVFSGITYMHK 139
Query: 531 GHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
+ +VH DLKP NILL +++ + DFG+S + + I T Y+APE
Sbjct: 140 HN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ---NTKMKDRIGTAYYIAPE 193
Query: 588 YGSEGIISPKSDVYSYGILL 607
G K DV+S G++L
Sbjct: 194 V-LRGTYDEKCDVWSAGVIL 212
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 423 LGTGSFGSV----YKGTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRN 472
LG+G F V KGT G A K + +SR + E ILR IRH N
Sbjct: 20 LGSGQFAIVRKCRQKGT---GKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPN 76
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+I + N L+LE + G L +L + L E + + L+ +H+ H
Sbjct: 77 IITLHDIFENKTDVVLILELVSGGELFDFL-AEKESLTEDEATQFLKQI---LDGVHYLH 132
Query: 533 STPMVHCDLKPNNI-LLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
S + H DLKP NI LLD+N+ + DFGI+ + G++ T ++APE
Sbjct: 133 SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEI 189
Query: 589 GSEGIISPKSDVYSYGIL 606
+ + ++D++S G++
Sbjct: 190 VNYEPLGLEADMWSIGVI 207
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
FL + + V +E+L S +H DL NILL E + DFG+++ + +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
D V + + +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 78
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---HTDDE 183
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 184 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
FL + + V +E+L S +H DL NILL E + DFG+++ + +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
D V + + +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 79/190 (41%), Gaps = 10/190 (5%)
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
NIP + L DL L+ A RL +L+ LYL+ NKLQ ++P +
Sbjct: 34 NIPADTKKL------DLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKN 86
Query: 185 XXXXXXXXXXCGHVP-PCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLN 243
+P L +L L L N+L S P F SL + Y++L N L
Sbjct: 87 LETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ 146
Query: 244 GSLPSNI-QNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLI 302
SLP + L L L L NQL L L+TL L +NQ + +F SL
Sbjct: 147 -SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLE 205
Query: 303 SLESLDLSRN 312
L+ L L N
Sbjct: 206 KLKMLQLQEN 215
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 205 LTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSR 263
LT LR L+L NKL + F L+ + + ++ N L +LP + L L L L R
Sbjct: 60 LTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDR 118
Query: 264 NQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLS 315
NQL P L L LSL N+ Q F L SL+ L L N L
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK 170
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 209 RRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSRNQLS 267
++L L SNKL+S +F L + + L+ N L +LP+ I + LK L L ++ N+L
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQ 98
Query: 268 GDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPK 320
L NL L L NQ + P+ F SL L L L N L +PK
Sbjct: 99 ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS-LPK 150
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 27/64 (42%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL+ L + DNKL L L L N L P F +L L LSL YN
Sbjct: 84 LKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143
Query: 65 YLMT 68
L +
Sbjct: 144 ELQS 147
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 70
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 71 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 118
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 175
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 176 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 104/222 (46%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLG-----ILERLN 516
+L+ ++H N+I ++ F P SLE++ +Y + +G I++
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKXQK 121
Query: 517 IMIDVGLALEY-----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
+ D L Y L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 37 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 90
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 91 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 145
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 146 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 202
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
D++S G ++ E K +F G + W K
Sbjct: 203 LGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 241
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 15 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 71
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 72 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 119
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 176
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 177 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 216
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 69
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 70 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 174
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 175 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 404 RTSYLDIQRATNGFNE----CNLLGTGSFGSVYKGTLFDGT--NVAIKVFNL-------- 449
R + L +T+GF E +LG G SV + + T A+K+ ++
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 450 -QLERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY 507
+++ + E +ILR + H N+I++ F LV + M G L +L +
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKV 119
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
L E IM + LE + H +VH DLKP NILLD++M ++DFG S L
Sbjct: 120 TLSEKETRKIMRAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 568 GDDSVIQTMTIATIGYMAPE------------YGSEGIISPKSDVYSYGILL 607
G+ T Y+APE YG E D++S G+++
Sbjct: 177 GEK---LRSVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 69
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 70 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 174
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 175 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 70
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 71 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 118
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 175
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 176 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 215
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 80
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 81 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 185
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 186 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 99/207 (47%), Gaps = 29/207 (14%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI-ATIG 582
EYLH S +++ DLKP N+L+D+ V+DFG +K + +T + T
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG------RTWXLCGTPE 203
Query: 583 YMAPEYGSEGIISPKSDVYSYGILLME 609
Y+APE + D ++ G+L+ +
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQ 230
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 75
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 180
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 181 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 100/232 (43%), Gaps = 42/232 (18%)
Query: 404 RTSYLDIQRATNGFNE----CNLLGTGSFGSVYKGTLFDGT--NVAIKVFNL-------- 449
R + L +T+GF E +LG G SV + + T A+K+ ++
Sbjct: 2 RDAALPGSHSTHGFYENYEPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSA 60
Query: 450 -QLERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY 507
+++ + E +ILR + H N+I++ F LV + M G L +L +
Sbjct: 61 EEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKV 119
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
L E IM + LE + H +VH DLKP NILLD++M ++DFG S L
Sbjct: 120 TLSEKETRKIMRAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176
Query: 568 GDDSVIQTMTIATIGYMAPE------------YGSEGIISPKSDVYSYGILL 607
G+ T Y+APE YG E D++S G+++
Sbjct: 177 GEK---LREVCGTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 219
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 78
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 79 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 183
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 184 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
FL + + V +E+L S +H DL NILL E + DFG+++ + +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
D V + + +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 72
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 73 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 120
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 177
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 178 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 217
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 69
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 70 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK 117
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 174
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 175 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 85
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 86 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 190
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 191 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 85
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 86 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 190
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 191 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)
Query: 508 FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567
FL + + V +E+L S +H DL NILL E + DFG+++ + +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
D V + + +MAPE + + + +SDV+S+G+LL E F+
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 78
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 79 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 126
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 183
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 184 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 223
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 28 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 84
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 85 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 132
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 189
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 190 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 229
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 75
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDE 180
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 181 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 93
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 94 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 198
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 199 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 75
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 180
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 181 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 79
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 184
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 185 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 99/209 (47%), Gaps = 39/209 (18%)
Query: 423 LGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKI 476
+G+G++GSV FD G VA+K + + A R++ E +L+ ++H N+I +
Sbjct: 40 VGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGL 96
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI----------LERLNIMIDVGLA 524
+ F P SLE++ +Y + +G L ++ +
Sbjct: 97 LDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 144
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD + T +AT Y
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM--TGYVATRWYR 199
Query: 585 APEYGSEGIISPKS-DVYSYGILLMETFT 612
APE + ++ D++S G ++ E T
Sbjct: 200 APEIMLNWMHYNQTVDIWSVGCIMAELLT 228
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 96
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 97 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 144
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 201
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 202 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 28/161 (17%)
Query: 460 SECEILRSIRHRNLIKIIS--NCCNIDFKALVLEFMPNGSLEKWL--------YSHNYFL 509
E IL+ + H N++K++ + N D +V E + G + + + YF
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ 144
Query: 510 GILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569
+++ +EYLH+ ++H D+KP+N+L+ E+ ++DFG+S +G
Sbjct: 145 DLIK----------GIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGS 190
Query: 570 DSVIQTMTIATIGYMAPEYGSE--GIISPKS-DVYSYGILL 607
D+++ T+ T +MAPE SE I S K+ DV++ G+ L
Sbjct: 191 DALLSN-TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL 230
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 92
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 93 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 140
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 197
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 198 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 13 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 71
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 72 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 116
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 176
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 177 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 93
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 94 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 198
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 199 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 31/223 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 26 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 79
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 80 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 134
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 135 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 191
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
D++S G ++ E K +F G + W K
Sbjct: 192 LGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 230
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 29 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSKPFQSIIHAKRTY-RELR 85
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 86 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 133
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 190
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 191 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 230
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 92
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 93 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 140
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 197
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 198 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 237
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 79
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR---HTDDE 184
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 185 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 75
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 76 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 123
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 180
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 181 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 220
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 143
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S +
Sbjct: 144 HRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHSFE 201
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 202 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 254
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 91/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPEVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 198 LGMGYKENVDIWSVGCIMGE 217
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 72/161 (44%), Gaps = 26/161 (16%)
Query: 460 SECEILRSIR-HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIM 518
E +ILR + H N+I++ F LV + M G L +L + L E IM
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIM 117
Query: 519 IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578
+ LE + H +VH DLKP NILLD++M ++DFG S L G+
Sbjct: 118 RAL---LEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVC 171
Query: 579 ATIGYMAPE------------YGSEGIISPKSDVYSYGILL 607
T Y+APE YG E D++S G+++
Sbjct: 172 GTPSYLAPEIIECSMNDNHPGYGKE------VDMWSTGVIM 206
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 79
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 184
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 185 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 79
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 80 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 127
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 184
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 185 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 224
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHSFE 197
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRNLI 474
LG G+FG V + T + VA+K+ R + SE ++L + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGILERLNIM--------------- 518
++ C ++ E+ G L +L + F+ IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 519 -IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + +L S +H DL NILL + DFG+++ + + V++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNA 230
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + +SDV+SYGI L E F+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 106/234 (45%), Gaps = 12/234 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 139
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
H DLK N+ L+E++ + DFG++ + E D +T+ T Y+APE S+ S +
Sbjct: 140 HRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLC-GTPNYIAPEVLSKKGHSFE 197
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 198 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 250
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 102/224 (45%), Gaps = 36/224 (16%)
Query: 414 TNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIK--------VFNLQLERASRSFDSECEI 464
++ F +LLG G++G V T G VAIK +F L+ R E +I
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-------EIKI 62
Query: 465 LRSIRHRNLIKIIS-----NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
L+ +H N+I I + + N + ++ E M L + + + +L +I
Sbjct: 63 LKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQ-----MLSDDHIQY 116
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE--GDDSVIQTMT 577
+ L + H + ++H DLKP+N+L++ N V DFG+++++ E D+S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 578 ------IATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRK 614
+AT Y APE + S DV+S G +L E F R+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 103/222 (46%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLG-----ILERLN 516
+L+ ++H N+I ++ F P SLE++ +Y + +G I++
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKSQK 121
Query: 517 IMIDVGLALEY-----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
+ D L Y L + HS ++H DLKP+N+ ++E+ + DFG+ + DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 421 NLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIIS 478
++LG G+ V L A+K+ Q E E+L + HRN++++I
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIE 78
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
D LV E M GS+ ++ +F LE ++ DV AL++LH + + H
Sbjct: 79 FFEEEDRFYLVFEKMRGGSILSHIHKRRHF-NELEASVVVQDVASALDFLH---NKGIAH 134
Query: 539 CDLKPNNILLD---ENMTAHVSDFGI-SKLLGEGDDSVIQTMTIAT----IGYMAPE--- 587
DLKP NIL + + + DF + S + GD S I T + T YMAPE
Sbjct: 135 RDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVE 194
Query: 588 -YGSEG-IISPKSDVYSYGILL 607
+ E I + D++S G++L
Sbjct: 195 AFSEEASIYDKRCDLWSLGVIL 216
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIV--CAAYD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
D++S G ++ E K +F G + W K
Sbjct: 198 LGMGYKENVDIWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRNLI 474
LG G+FG V + T + VA+K+ R + SE ++L + H N++
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGILERLNIM--------------- 518
++ C ++ E+ G L +L + F+ IM
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 150
Query: 519 -IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + +L S +H DL NILL + DFG+++ + + V++
Sbjct: 151 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 207
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + +SDV+SYGI L E F+
Sbjct: 208 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 102/206 (49%), Gaps = 14/206 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN-VAIKVFNLQL--ERASRSFDSECEILRSIRHRNL 473
+ + +G G++G+V+K + VA+K L E S E +L+ ++H+N+
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 474 IKIISNCCNIDFK-ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+++ + + D K LV EF + L+K+ S N G L+ + + L+ L H
Sbjct: 64 VRL-HDVLHSDKKLTLVFEFC-DQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCH 118
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--YGS 590
S ++H DLKP N+L++ N ++DFG+++ G + + T+ Y P+ +G+
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGA 176
Query: 591 EGIISPKSDVYSYGILLMETFTRKKP 616
+ + S D++S G + E +P
Sbjct: 177 K-LYSTSIDMWSAGCIFAELANAARP 201
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 163
Query: 538 HCDLKPNNILLDENMTAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+ S
Sbjct: 164 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSF 220
Query: 597 KSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
+ DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 274
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 41/235 (17%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD---GTNVAIK-VFNLQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D T VAIK + + + + E +IL RH N
Sbjct: 45 YTQLQYIGEGAYGMV--SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 473 LIKIISNCCNIDFKAL----VLEFMPNGSLEKWLYSHN-------YFLGILERLNIMIDV 521
+I I +A+ +++ + L K L S YFL + R
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILR------- 155
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIAT 580
L+Y+H S ++H DLKP+N+L++ + DFG++++ E D + T +AT
Sbjct: 156 --GLKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVAT 210
Query: 581 IGYMAPEY--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
Y APE S+G + D++S G +L E + + IF G KH++ +
Sbjct: 211 RWYRAPEIMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 198 LGMGYKENVDIWSVGCIMGE 217
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 53/307 (17%)
Query: 409 DIQRATNGFNEC-----------NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRS 457
D +A++ NEC +G+G V++ AIK NL+ E +++
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE-EADNQT 97
Query: 458 FDS---ECEILRSIRHRN--LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL 512
DS E L ++ + +I++ + +V+E N L WL +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPW 155
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
ER + ++ LE +H H +VH DLKP N L+ + M + DFGI+ + SV
Sbjct: 156 ERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 573 IQTMTIATIGYMAPEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIF 621
++ + T+ YM PE + S ++ DV+S G +L K P +I
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI- 270
Query: 622 IGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRV 680
I ++S H ++D N E F D + L CC++ P+QR+
Sbjct: 271 INQISKLH-----------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
Query: 681 SMKDAAA 687
S+ + A
Sbjct: 314 SIPELLA 320
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 161
Query: 538 HCDLKPNNILLDENMTAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+ S
Sbjct: 162 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSF 218
Query: 597 KSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
+ DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 272
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 84/207 (40%), Gaps = 29/207 (14%)
Query: 420 CNLLGTGSFGSVYK------GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNL 473
C ++G G+F V + G F V + F ++ E I ++H ++
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 474 IKIISNCCNIDFKALVLEFMPNGSL---------EKWLYSHNYFLGILERLNIMIDVGLA 524
++++ + +V EFM L ++YS + ++
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI--------- 139
Query: 525 LEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
LE L + H ++H D+KP N+LL + + + DFG++ LGE ++ + T
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES--GLVAGGRVGTP 197
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLM 608
+MAPE DV+ G++L
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 198 LGMGYKENVDIWSVGCIMGE 217
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRNLI 474
LG G+FG V + T + VA+K+ R + SE ++L + H N++
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGILERLNIM--------------- 518
++ C ++ E+ G L +L + F+ IM
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 168
Query: 519 -IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + +L S +H DL NILL + DFG+++ + + V++
Sbjct: 169 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 225
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + +SDV+SYGI L E F+
Sbjct: 226 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRNLI 474
LG G+FG V + T + VA+K+ R + SE ++L + H N++
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGILERLNIM--------------- 518
++ C ++ E+ G L +L + F+ IM
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 173
Query: 519 -IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + +L S +H DL NILL + DFG+++ + + V++
Sbjct: 174 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 230
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + +SDV+SYGI L E F+
Sbjct: 231 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + D+G+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 89/215 (41%), Gaps = 28/215 (13%)
Query: 423 LGTGSFGSVYKGTLFD------GTNVAIKVFNLQLERASR-SFDSECEILRSI-RHRNLI 474
LG G+FG V + T + VA+K+ R + SE ++L + H N++
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 475 KIISNCCNIDFKALVLEFMPNGSLEKWLY-SHNYFLGILERLNIM--------------- 518
++ C ++ E+ G L +L + F+ IM
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSF 166
Query: 519 -IDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577
V + +L S +H DL NILL + DFG+++ + + V++
Sbjct: 167 SYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNA 223
Query: 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612
+ +MAPE + + +SDV+SYGI L E F+
Sbjct: 224 RLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 33 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 86
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 87 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 141
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 142 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 198
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 199 LGMGYKENVDIWSVGCIMGE 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 198 LGMGYKENVDIWSVGCIMGE 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%), Gaps = 22/160 (13%)
Query: 415 NGFNECNLLGTGSFGSV----YKGTLFDGTNVAIKVFNLQ----LERASRSFDSECEILR 466
+ F+ LGTGSFG V +K + G + A+K+ + Q L++ + + E IL+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKES---GNHYAMKILDKQKVVKLKQIEHTLN-EKRILQ 96
Query: 467 SIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGL 523
++ L+K+ + + +V+E++ G + +SH +G + + L
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM----FSHLRRIGRFSEPHARFYAAQIVL 152
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563
EYLH S +++ DLKP N+L+D+ V+DFG +K
Sbjct: 153 TFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK 189
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 93/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + T + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 198 LGMGYKENVDIWSVGCIMGE 217
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 128/307 (41%), Gaps = 53/307 (17%)
Query: 409 DIQRATNGFNEC-----------NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRS 457
D +A++ NEC +G+G V++ AIK NL+ E +++
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE-EADNQT 97
Query: 458 FDS---ECEILRSIRHRN--LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL 512
DS E L ++ + +I++ + +V+E N L WL +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPW 155
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
ER + ++ LE +H H +VH DLKP N L+ + M + DFGI+ + SV
Sbjct: 156 ERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 573 IQTMTIATIGYMAPEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIF 621
++ + T+ YM PE + S ++ DV+S G +L K P +I
Sbjct: 212 VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI- 270
Query: 622 IGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRV 680
I ++S H ++D N E F D + L CC++ P+QR+
Sbjct: 271 INQISKLH-----------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
Query: 681 SMKDAAA 687
S+ + A
Sbjct: 314 SIPELLA 320
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-- 468
R T F+E +G+G FGSV+K DG AIK L + S D E LR +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---AGSVD-EQNALREVYA 59
Query: 469 -----RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY----FLGILERLNIMI 519
+H ++++ S D + E+ GSL + S NY + E ++++
Sbjct: 60 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLL 118
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILL 548
VG L Y+ HS +VH D+KP+NI +
Sbjct: 119 QVGRGLRYI---HSMSLVHMDIKPSNIFI 144
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 80
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 81 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
T +AT Y APE + ++ D++S G ++ E T
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 80
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 81 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
T +AT Y APE + ++ D++S G ++ E T
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 80
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 81 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 128
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ +
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE--- 185
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
T +AT Y APE + ++ D++S G ++ E T
Sbjct: 186 --MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-- 468
R T F+E +G+G FGSV+K DG AIK L + S D E LR +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---AGSVD-EQNALREVYA 61
Query: 469 -----RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY----FLGILERLNIMI 519
+H ++++ S D + E+ GSL + S NY + E ++++
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLL 120
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILL 548
VG L Y+ HS +VH D+KP+NI +
Sbjct: 121 QVGRGLRYI---HSMSLVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-- 468
R T F+E +G+G FGSV+K DG AIK L + S D E LR +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---AGSVD-EQNALREVYA 63
Query: 469 -----RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY----FLGILERLNIMI 519
+H ++++ S D + E+ GSL + S NY + E ++++
Sbjct: 64 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLL 122
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILL 548
VG L Y+ HS +VH D+KP+NI +
Sbjct: 123 QVGRGLRYI---HSMSLVHMDIKPSNIFI 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-- 468
R T F+E +G+G FGSV+K DG AIK L + S D E LR +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPL---AGSVD-EQNALREVYA 61
Query: 469 -----RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNY----FLGILERLNIMI 519
+H ++++ S D + E+ GSL + S NY + E ++++
Sbjct: 62 HAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLL 120
Query: 520 DVGLALEYLHHGHSTPMVHCDLKPNNILL 548
VG L Y+ HS +VH D+KP+NI +
Sbjct: 121 QVGRGLRYI---HSMSLVHMDIKPSNIFI 146
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 93
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 94 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 141
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 198
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ +AT Y APE + ++ D++S G ++ E T
Sbjct: 199 MXG--XVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 238
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G++G V + + T A+ V + ++RA + E I + H N++K +
Sbjct: 15 LGEGAYGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGH 73
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 74 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 118
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 178
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 179 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 11/198 (5%)
Query: 417 FNECNLLGTGSFGSV----YKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHR 471
F+ ++G GSFG V +K +F V K L+ + +L++++H
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 472 NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG 531
L+ + + D VL+++ G L L FL R ++ AL YLH
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH-- 156
Query: 532 HSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
S +V+ DLKP NILLD ++DFG+ K E + + + T Y+APE +
Sbjct: 157 -SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT--STFCGTPEYLAPEVLHK 213
Query: 592 GIISPKSDVYSYGILLME 609
D + G +L E
Sbjct: 214 QPYDRTVDWWCLGAVLYE 231
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLER---ASRSFDSECEILRSIRHRN 472
+ + +G GS+G V+K D G VAIK F L+ E + E +L+ ++H N
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF-LESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
L+ ++ LV E+ + L + Y G+ E L I L+ ++ H
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHEL---DRYQRGVPEHLVKSI-TWQTLQAVNFCH 119
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE-YGSE 591
+H D+KP NIL+ ++ + DFG ++LL D +AT Y +PE +
Sbjct: 120 KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDD--EVATRWYRSPELLVGD 177
Query: 592 GIISPKSDVYSYGILLME 609
P DV++ G + E
Sbjct: 178 TQYGPPVDVWAIGCVFAE 195
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 32 IGSGAQGIV--CAAYD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 85
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 86 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 140
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + + T Y APE
Sbjct: 141 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMEPEVVTRYYRAPEVI 197
Query: 590 SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
D++S G ++ E K +F G + W K
Sbjct: 198 LGMGYKENVDLWSVGCIMGEMVCHKI----LFPGRDYIDQWNK 236
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 422 LLGTGSFGSVYKGTLFDGTNV---AIKVFNLQLERASRS-FDSECEILRSIRHRNLIKII 477
LG G F ++ + D V I +L L+ R E I RS+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ DF +VLE SL + L+ L E + + L +YLH ++
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQYLHRNR---VI 137
Query: 538 HCDLKPNNILLDENMTAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISP 596
H DLK N+ L+E++ + DFG+ +K+ +G+ + + T Y+APE S+ S
Sbjct: 138 HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER---KKVLCGTPNYIAPEVLSKKGHSF 194
Query: 597 KSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDANLVRE 650
+ DV+S G ++ K P + E L+ E S+P + V A+L+++
Sbjct: 195 EVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVA-ASLIQK 248
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNL 473
+ + +G+G+ G V FD G NVA+K + SR F ++ R+ R L
Sbjct: 24 YQQLKPIGSGAQGIVCAA--FDTVLGINVAVK-------KLSRPFQNQTHAKRAYRELVL 74
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------ 527
+K +++ I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 75 LKCVNHKNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIHMELDHERMSYL 129
Query: 528 -------LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
+ H HS ++H DLKP+NI++ + T + DFG+++ + + T + T
Sbjct: 130 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ASTNFMMTPYVVT 186
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632
Y APE D++S G ++ E + IF G + W K
Sbjct: 187 RYYRAPEVILGMGYKENVDIWSVGCIMGELVK----GSVIFQGTDHIDQWNK 234
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 69
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 70 LLKHMKHENVIGLLD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 117
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 174
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ +AT Y APE + ++ D++S G ++ E T
Sbjct: 175 M--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 214
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 39/209 (18%)
Query: 423 LGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKI 476
+G+G++GSV FD G VA+K + + A R++ E +L+ ++H N+I +
Sbjct: 53 VGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELRLLKHMKHENVIGL 109
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI----------LERLNIMIDVGLA 524
+ F P SLE++ +Y + +G L ++ +
Sbjct: 110 LD------------VFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQI 157
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD + +AT Y
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEMXG--YVATRWYR 212
Query: 585 APEYGSEGIISPKS-DVYSYGILLMETFT 612
APE + ++ D++S G ++ E T
Sbjct: 213 APEIMLNWMHYNQTVDIWSVGCIMAELLT 241
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG GSFG V++ G A+K L++ R C L S R ++ +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSSPR---IVPLYGAVR 134
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ + +E + GSL + + +G L + +G ALE L + H+ ++H D+
Sbjct: 135 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 190
Query: 542 KPNNILLDENMT-AHVSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
K +N+LL + + A + DFG + L G G + T +MAPE K
Sbjct: 191 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 250
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLK 628
D++S +++ P + F G + LK
Sbjct: 251 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 281
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDS--ECEILRSIRHRNLIKIISN 479
+G G+FG V+K G VA+K ++ E+ + E +IL+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 480 C---------CNIDFKALVLEFMPN---GSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
C C LV +F + G L L + L ++R+ M+ L
Sbjct: 86 CRTKASPYNRCKASI-YLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNG 137
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 585
L++ H ++H D+K N+L+ + ++DFG+++ +S + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 586 PE-YGSEGIISPKSDVYSYGILLMETFTR 613
PE E P D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 90/212 (42%), Gaps = 31/212 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISN 479
LG G+ G V + + T A+ V + ++RA + E I + + H N++K +
Sbjct: 14 LGEGAAGEV-QLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLH------ 529
+ + L LE+ G L +R I D+G+ A + H
Sbjct: 73 RREGNIQYLFLEYCSGGEL-------------FDR--IEPDIGMPEPDAQRFFHQLMAGV 117
Query: 530 -HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE- 587
+ H + H D+KP N+LLDE +SDFG++ + + + T+ Y+APE
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPEL 177
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619
+ DV+S GI+L + P ++
Sbjct: 178 LKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 22/118 (18%)
Query: 511 ILERL--NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568
I ER+ + + + AL YL H ++H D+KP+NILLDE + DFGIS G
Sbjct: 121 IPERILGKMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGIS---GRL 175
Query: 569 DDSVIQTMTIATIGYMAPEYGSEGIISP----------KSDVYSYGILLMETFTRKKP 616
D + + YMAPE I P ++DV+S GI L+E T + P
Sbjct: 176 VDDKAKDRSAGCAAYMAPER-----IDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 17/217 (7%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---S 460
+D + N F LLG G+FG V K T G A+K+ ++ A +
Sbjct: 3 MDPRVTMNEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLT 59
Query: 461 ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID 520
E +L++ RH L + + D V+E+ G L L F R +
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAE 118
Query: 521 VGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIA 579
+ AL+YLH + +V+ DLK N++LD++ ++DFG+ K EG D
Sbjct: 119 IVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCG 173
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKP 616
T Y+APE + D + G+++ E + P
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 92/209 (44%), Gaps = 15/209 (7%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 204
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + + D V+E+ G L L F R ++ AL+Y
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 263
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH + +V+ DLK N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 264 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTF-CGTPEYLAPE 319
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D + G+++ E + P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 9/125 (7%)
Query: 516 NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575
I + + ALE+LH S ++H D+KP+N+L++ + DFGIS L D V +
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV---DDVAKD 167
Query: 576 MTIATIGYMAPEYGSEGI----ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ YMAPE + + S KSD++S GI ++E + P + LK V
Sbjct: 168 IDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVV 227
Query: 632 KESLP 636
+E P
Sbjct: 228 EEPSP 232
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
LG G FG V++ + F E IL RHRN++ + + +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542
++ ++ EF+ + + + + + L E ++ + V AL++L HS + H D++
Sbjct: 73 MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL---HSHNIGHFDIR 129
Query: 543 PNNILLD--ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDV 600
P NI+ + T + +FG ++ L GD+ + Y APE ++S +D+
Sbjct: 130 PENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTATDM 186
Query: 601 YSYGILL 607
+S G L+
Sbjct: 187 WSLGTLV 193
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
LE +H H +VH DLKP N L+ + M + DFGI+ + SV++ + T+ YM
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 585 APEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
PE + S ++ DV+S G +L K P +I I ++S H
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQISKLH---- 234
Query: 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRVSMKDAAA 687
++D N E F D + L CC++ P+QR+S+ + A
Sbjct: 235 -------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLA 276
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD--------GTNVAIKVFNLQLERASRSFDSECEILRSI 468
FNE LG G+F ++KG + T V +KV + S SF ++ +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
H++L+ C D LV EF+ GSL+ +L + + IL +L + + A+ +L
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFL 129
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
++H ++ NILL + KL G I + + P
Sbjct: 130 ---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG--ISITVLPKDILQERIPWV 184
Query: 589 GSEGIISPK-----SDVYSYGILLME 609
E I +PK +D +S+G L E
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 88/202 (43%), Gaps = 12/202 (5%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSI 468
R T + LG G+F V + + G A + N + R + + E I R +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLL 67
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
+H N++++ + L+ + + G L + + + Y+ + + LE +
Sbjct: 68 KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYY----SEADASHCIQQILEAV 123
Query: 529 HHGHSTPMVHCDLKPNNILLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
H H +VH +LKP N+LL + ++DFG++ + EG+ T GY++
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFA-GTPGYLS 181
Query: 586 PEYGSEGIISPKSDVYSYGILL 607
PE + D+++ G++L
Sbjct: 182 PEVLRKDPYGKPVDLWACGVIL 203
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 15/202 (7%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 207
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + + D V+E+ G L L F R ++ AL+Y
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 266
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH + +V+ DLK N++LD++ ++DFG+ K G D + ++T T Y+APE
Sbjct: 267 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTF-CGTPEYLAPE 322
Query: 588 YGSEGIISPKSDVYSYGILLME 609
+ D + G+++ E
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYE 344
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 127/307 (41%), Gaps = 53/307 (17%)
Query: 409 DIQRATNGFNEC-----------NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRS 457
D +A++ NEC +G+G V++ AIK NL+ E +++
Sbjct: 39 DDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE-EADNQT 97
Query: 458 FDS---ECEILRSIRHRN--LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL 512
DS E L ++ + +I++ + +V+E N L WL +
Sbjct: 98 LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPW 155
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
ER + ++ LE +H H +VH DLKP N L+ + M + DFGI+ + SV
Sbjct: 156 ERKSYWKNM---LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSV 211
Query: 573 IQTMTIATIGYMAPEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIF 621
++ + + YM PE + S ++ DV+S G +L K P +I
Sbjct: 212 VKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI- 270
Query: 622 IGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRV 680
I ++S H ++D N E F D + L CC++ P+QR+
Sbjct: 271 INQISKLH-----------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRI 313
Query: 681 SMKDAAA 687
S+ + A
Sbjct: 314 SIPELLA 320
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 92/219 (42%), Gaps = 25/219 (11%)
Query: 423 LGTGSFGSV-YKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
LG G F V L DG A+K ++ E ++ R H N++++++ C
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCL 96
Query: 482 N---IDFKA-LVLEFMPNGSLEKW-----LYSHNYFLGILERLNIMIDVGLALEYLHHGH 532
+A L+L F G+L W L FL + L +++ + LE +H
Sbjct: 97 RERGAKHEAWLLLPFFKRGTL--WNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH--- 151
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFG---ISKLLGEGDDSVIQTMTIA----TIGYMA 585
+ H DLKP NILL + + D G + + EG + A TI Y A
Sbjct: 152 AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRA 211
Query: 586 PE---YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIF 621
PE S +I ++DV+S G +L + P + +F
Sbjct: 212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVF 250
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 96/209 (45%), Gaps = 33/209 (15%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNL 473
+ + +G+G+ G V FD G NVA+K + SR F ++ R+ R L
Sbjct: 26 YQQLKPIGSGAQGIVCAA--FDTVLGINVAVK-------KLSRPFQNQTHAKRAYRELVL 76
Query: 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY------ 527
+K +++ I +L+ F P +LE+ + Y + L N+ + + L++
Sbjct: 77 LKCVNHKNII---SLLNVFTPQKTLEE--FQDVYLVMELMDANLCQVIHMELDHERMSYL 131
Query: 528 -------LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIAT 580
+ H HS ++H DLKP+NI++ + T + DFG+++ + + T + T
Sbjct: 132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART---ACTNFMMTPYVVT 188
Query: 581 IGYMAPEYGSEGIISPKSDVYSYGILLME 609
Y APE + D++S G ++ E
Sbjct: 189 RYYRAPEVILGMGYAANVDIWSVGCIMGE 217
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 27/200 (13%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN 482
+G+G+ G V +D AI N+ +++ SR F ++ R+ R L+K +++
Sbjct: 34 IGSGAQGIVCAA--YD----AILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNI 87
Query: 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY-------------LH 529
I L+ F P SLE+ + Y + L N+ + + L++ +
Sbjct: 88 I---GLLNVFTPQKSLEE--FQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK 142
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H HS ++H DLKP+NI++ + T + DFG+++ G S + + T Y APE
Sbjct: 143 HLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG---TSFMMVPFVVTRYYRAPEVI 199
Query: 590 SEGIISPKSDVYSYGILLME 609
D++S G ++ E
Sbjct: 200 LGMGYKENVDIWSVGCIMGE 219
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Query: 206 TSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRN- 264
S +R+ L N+++ +SF S + + L +N+L G + L +L LDLS N
Sbjct: 31 ASSQRIFLHGNRISYVPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNA 90
Query: 265 QLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKNFSA 324
QL PTT GL +L TL L Q P F L +L+ L L NNL F
Sbjct: 91 QLRVVDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRD 150
Query: 325 QSFLSNYALCGPARLQVPSCRKYNSRGFKKVALLVLK 361
L++ L G ++PS ++ RG + L+L
Sbjct: 151 LGNLTHLFLHGN---RIPSVPEHAFRGLHSLDRLLLH 184
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 70/173 (40%), Gaps = 3/173 (1%)
Query: 79 SSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIV 138
+S +CRNLT+L L SN L GI + Q + +LR P L +
Sbjct: 49 ASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHT 108
Query: 139 FDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHV 198
L+ C L P L LQ LYL N LQ ++P + V
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLTHLFLHGNRIPSV 167
Query: 199 PP-CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI 250
P L SL RL L N + P +F L ++ + L AN+L+ LP+ +
Sbjct: 168 PEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS-MLPAEV 219
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 52/118 (44%), Gaps = 2/118 (1%)
Query: 199 PPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSN-IQNLKVLT 257
P L L LHL L P F L + Y+ L N+L +LP N ++L LT
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ-ALPDNTFRDLGNLT 155
Query: 258 NLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLS 315
+L L N++ GL +L+ L L N P +F L L +L L NNLS
Sbjct: 156 HLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 7 NLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLI-PNTFGNLGSLQVLSL 61
NL L L N L+G + T + L LDLS N+ ++ P TF LG L L L
Sbjct: 56 NLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHL 111
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 57/159 (35%), Gaps = 21/159 (13%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L L+YL L DN L N+ + L L L N + + F L SL L L N
Sbjct: 127 LAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFRGLHSLDRLLLHQN 186
Query: 65 YLMTESSAAKWNF-----------------LSSLTNCRNLTVLGLASNPLRGILPPLIGN 107
++ A + L R+L L L NP +
Sbjct: 187 HVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLNDNPW--VCDCRARP 244
Query: 108 FSASLQEFYAYGCKLRGNIPQEIG--NLSGMIVFDLNGC 144
A LQ+F ++ N+PQ + +L + DL GC
Sbjct: 245 LWAWLQKFRGSSSEVPCNLPQRLAGRDLKRLAASDLEGC 283
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 77/175 (44%), Gaps = 31/175 (17%)
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
LE +H H +VH DLKP N L+ + M + DFGI+ + SV++ + T+ YM
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 585 APEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
PE + S ++ DV+S G +L K P +I I ++S H
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQISKLH---- 230
Query: 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRVSMKDAAA 687
++D N E F D + L CC++ P+QR+S+ + A
Sbjct: 231 -------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLA 272
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 100/220 (45%), Gaps = 35/220 (15%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLE---RASRSFDSECEIL 465
I + + +G+G++GSV + G +A+K + + A R++ E +L
Sbjct: 46 IWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTY-RELRLL 104
Query: 466 RSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI----------LE 513
+ ++H N+I L+ F P SLE++ +Y + +G L
Sbjct: 105 KHMKHENVI------------GLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 514 RLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
++ + L L + HS ++H DLKP+N+ ++E+ + DFG+++ DD +
Sbjct: 153 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTDDEM- 208
Query: 574 QTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLMETFT 612
T +AT Y APE + + D++S G ++ E T
Sbjct: 209 -TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLT 247
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 20/206 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFD--------GTNVAIKVFNLQLERASRSFDSECEILRSI 468
FNE LG G+F ++KG + T V +KV + S SF ++ +
Sbjct: 12 FNES--LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
H++L+ C D LV EF+ GSL+ +L + + IL +L + + A+ +L
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAWAMHFL 129
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEY 588
++H ++ NILL + KL G I + + P
Sbjct: 130 ---EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG--ISITVLPKDILQERIPWV 184
Query: 589 GSEGIISPK-----SDVYSYGILLME 609
E I +PK +D +S+G L E
Sbjct: 185 PPECIENPKNLNLATDKWSFGTTLWE 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL + RH N
Sbjct: 27 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 85 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 200 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 42/282 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS---ECEILRSIRHRN--LIKII 477
+G+G V++ AIK NL+ E +++ DS E L ++ + +I++
Sbjct: 17 IGSGGSSKVFQVLNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ +V+E N L WL + ER + ++ LE +H H +V
Sbjct: 76 DYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHGIV 130
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
H DLKP N L+ + M + DFGI+ + SV++ + T+ YM PE + S +
Sbjct: 131 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 189
Query: 598 S-----------DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646
+ DV+S G +L K P +I I ++S H ++D N
Sbjct: 190 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQISKLH-----------AIIDPN 237
Query: 647 LVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRVSMKDAAA 687
E F D + L CC++ P+QR+S+ + A
Sbjct: 238 ---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLA 273
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 42/282 (14%)
Query: 423 LGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDS---ECEILRSIRHRN--LIKII 477
+G+G V++ AIK NL+ E +++ DS E L ++ + +I++
Sbjct: 36 IGSGGSSKVFQVLNEKKQIYAIKYVNLE-EADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 478 SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMV 537
+ +V+E N L WL + ER + ++ LE +H H +V
Sbjct: 95 DYEITDQYIYMVME-CGNIDLNSWLKKKK-SIDPWERKSYWKNM---LEAVHTIHQHGIV 149
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
H DLKP N L+ + M + DFGI+ + SV++ + T+ YM PE + S +
Sbjct: 150 HSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRE 208
Query: 598 S-----------DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646
+ DV+S G +L K P +I I ++S H ++D N
Sbjct: 209 NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQISKLH-----------AIIDPN 256
Query: 647 LVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRVSMKDAAA 687
E F D + L CC++ P+QR+S+ + A
Sbjct: 257 ---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLA 292
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 45 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + L L + + + L +I + L L
Sbjct: 103 IIGI-----NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 218 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + FG+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 515 LNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL--GEGDDSV 572
L+I I + A+E+LH S ++H DLKP+NI + V DFG+ + E + +V
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 573 IQTM--------TIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609
+ M + T YM+PE S K D++S G++L E
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GSFG V++ G A+K L++ R C L S R ++ +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSSPR---IVPLYGAVR 120
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ + +E + GSL + + +G L + +G ALE L + H+ ++H D+
Sbjct: 121 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 176
Query: 542 KPNNILLDENMT-AHVSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
K +N+LL + + A + DFG + L G G + T +MAPE K
Sbjct: 177 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 236
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLK 628
D++S +++ P + F G + LK
Sbjct: 237 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 267
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDS--ECEILRSIRHRNLIKIISN 479
+G G+FG V+K G VA+K ++ E+ + E +IL+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 480 C---------CNIDFKALVLEFMPN---GSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
C C LV +F + G L L + L ++R+ M+ L
Sbjct: 86 CRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNG 137
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 585
L++ H ++H D+K N+L+ + ++DFG+++ +S + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 586 PE-YGSEGIISPKSDVYSYGILLMETFTR 613
PE E P D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + D G+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDS--ECEILRSIRHRNLIKIISN 479
+G G+FG V+K G VA+K ++ E+ + E +IL+ ++H N++ +I
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 480 C---------CNIDFKALVLEFMPN---GSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
C C LV +F + G L L + L ++R+ M+ L
Sbjct: 86 CRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNG 137
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 585
L++ H ++H D+K N+L+ + ++DFG+++ +S + T+ Y
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 586 PE-YGSEGIISPKSDVYSYGILLMETFTR 613
PE E P D++ G ++ E +TR
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTR 226
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL + RH N
Sbjct: 27 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 85 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 200 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 94/209 (44%), Gaps = 26/209 (12%)
Query: 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDS--ECEILRSIRHRNLIKIISN 479
+G G+FG V+K G VA+K ++ E+ + E +IL+ ++H N++ +I
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 480 C---------CNIDFKALVLEFMPN---GSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
C C LV +F + G L L + L ++R+ M+ L
Sbjct: 85 CRTKASPYNRCKGSI-YLVFDFCEHDLAGLLSNVLVK--FTLSEIKRVMQML-----LNG 136
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT--IATIGYMA 585
L++ H ++H D+K N+L+ + ++DFG+++ +S + T+ Y
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 586 PE-YGSEGIISPKSDVYSYGILLMETFTR 613
PE E P D++ G ++ E +TR
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTR 225
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 14/211 (6%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC 481
+G GSFG V++ G A+K L++ R C L S R ++ +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELV--ACAGLSSPR---IVPLYGAVR 136
Query: 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL 541
+ + +E + GSL + + +G L + +G ALE L + H+ ++H D+
Sbjct: 137 EGPWVNIFMELLEGGSLGQLIKQ----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDV 192
Query: 542 KPNNILLDENMT-AHVSDFGISKLL---GEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
K +N+LL + + A + DFG + L G G + T +MAPE K
Sbjct: 193 KADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAK 252
Query: 598 SDVYSYGILLMETFTRKKPTNEIFIGEMSLK 628
D++S +++ P + F G + LK
Sbjct: 253 VDIWSSCCMMLHMLNGCHPWTQYFRGPLCLK 283
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGHRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + DF +++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKI 476
+G+G++GSV Y L VA+K + + A R++ E +L+ ++H N+I +
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL---ERLNIMIDVGLALEY------ 527
+ F P S+E +S Y + L + NI+ L+ E+
Sbjct: 93 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVY 138
Query: 528 -----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
L + HS ++H DLKP+N+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRW 193
Query: 583 YMAPEYGSEGIISPKS-DVYSYGILLMETFTRK 614
Y APE + ++ D++S G ++ E K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 100/200 (50%), Gaps = 14/200 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTN-VAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISN 479
+G G++G+V+K + VA+K L E S E +L+ ++H+N++++ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRL-HD 68
Query: 480 CCNIDFK-ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
+ D K LV EF + L+K+ S N G L+ + + L+ L HS ++H
Sbjct: 69 VLHSDKKLTLVFEFC-DQDLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE--YGSEGIISP 596
DLKP N+L++ N +++FG+++ G + + T+ Y P+ +G++ + S
Sbjct: 125 RDLKPQNLLINRNGELKLANFGLARAFGIP--VRCYSAEVVTLWYRPPDVLFGAK-LYST 181
Query: 597 KSDVYSYGILLMETFTRKKP 616
D++S G + E +P
Sbjct: 182 SIDMWSAGCIFAELANAGRP 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + D G+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 64
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + + D V+E+ G L L F R ++ AL+Y
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 123
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAP 586
LH + +V+ DLK N++LD++ ++DFG+ K EG D T Y+AP
Sbjct: 124 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP 178
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E + D + G+++ E + P
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 17/210 (8%)
Query: 415 NGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFD---SECEILRS 467
N F LLG G+FG V K T G A+K+ ++ A +E +L++
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQN 65
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
RH L + + D V+E+ G L L F R ++ AL+Y
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF-YGAEIVSALDY 124
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG-DDSVIQTMTIATIGYMAP 586
LH + +V+ DLK N++LD++ ++DFG+ K EG D T Y+AP
Sbjct: 125 LHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP 179
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKP 616
E + D + G+++ E + P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 33 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 91 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 145
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 146 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 205
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 206 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 244
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 198 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 198 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 198 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 98/235 (41%), Gaps = 20/235 (8%)
Query: 392 DQEDLLSLATWRRTSYLDIQ-RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNL 449
D + L W+ +L+ Q + F + +LG G FG V+ + G A K N
Sbjct: 164 DSKYFLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNK 220
Query: 450 QLERASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN 506
+ + + + E +IL + R ++ + LV+ M G + +Y+ +
Sbjct: 221 KRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVD 280
Query: 507 YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566
+ + + L H H +++ DLKP N+LLD++ +SD G++ L
Sbjct: 281 EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 567 EGDDSVIQTMT---IATIGYMAPE--YGSEGIISPKSDVYSYGILLMETFTRKKP 616
G QT T T G+MAPE G E S D ++ G+ L E + P
Sbjct: 341 AG-----QTKTKGYAGTPGFMAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 130/311 (41%), Gaps = 76/311 (24%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL LTLF+N+++ P + N + L L+LSSN+ S + + L SLQ LS + N
Sbjct: 106 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSN 161
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+ L L N L L ++SN + I
Sbjct: 162 QVTD---------LKPLANLTTLERLDISSNKVSDI------------------------ 188
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
++ ++ NL +I + D+ T +G L L L L+GN+L+
Sbjct: 189 SVLAKLTNLESLIATNNQISDI-----TPLGILTNLDELSLNGNQLKD------------ 231
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 232 ----------IG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 276 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 329
Query: 305 ESLDLSRNNLS 315
+ L S N +S
Sbjct: 330 QRLFFSNNKVS 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 201 CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLD 260
L+ LTSL++L SN++T P +L + +++S+N + S+I L LTNL+
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKV-----SDISVLAKLTNLE 198
Query: 261 ---LSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGE 317
+ NQ+S P +G L NL+ LSL NQ + + SL +L LDL+ N +S
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNL 254
Query: 318 IP 319
P
Sbjct: 255 AP 256
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 101/222 (45%), Gaps = 39/222 (17%)
Query: 410 IQRATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE---RASRSFDSECE 463
I + + +G+G++GSV FD G VA+K + + A R++ E
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAA--FDTKTGLRVAVKKLSRPFQSIIHAKRTY-RELR 73
Query: 464 ILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW--LYSHNYFLGI---------- 511
+L+ ++H N+I ++ F P SLE++ +Y + +G
Sbjct: 74 LLKHMKHENVIGLLDV------------FTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 121
Query: 512 LERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571
L ++ + L L + HS ++H DLKP+N+ ++E+ + D G+++ DD
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---HTDDE 178
Query: 572 VIQTMTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFT 612
+ T +AT Y APE + ++ D++S G ++ E T
Sbjct: 179 M--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 218
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 27 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 85 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 139
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 140 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 200 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 238
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIK-VFNLQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 45 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 103 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 157
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 158 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 218 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 256
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 198 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPAFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 25 YTNLSYIGEGAYGMV--CSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 83 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 137
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 138 KYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 198 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 236
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNL--QLERASRS-FDSECEI 464
++Q F ++G G+FG V + + + A+K+ N L+RA + F E ++
Sbjct: 84 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 143
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGL 523
L + + + + + + LV+++ G L L + + R I ++ L
Sbjct: 144 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EMVL 202
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ-TMTIATIG 582
A++ +H H VH D+KP+N+LLD N ++DFG L DD +Q ++ + T
Sbjct: 203 AIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPD 257
Query: 583 YMAPEY-----GSEGIISPKSDVYSYGILLMETFTRKKP 616
Y++PE G P+ D +S G+ + E + P
Sbjct: 258 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 102/243 (41%), Gaps = 11/243 (4%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNLQL---ERASRSFDSECEILRS 467
R + LG G F Y+ T D V A KV + +E I +S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH+ ++H DLK N+ L+++M + DFG++ + E D +T+ T Y+APE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLC-GTPNYIAPE 212
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDAN 646
+ S + D++S G +L K P + E ++ E S+P + V A
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 272
Query: 647 LVR 649
+ R
Sbjct: 273 IRR 275
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 93/198 (46%), Gaps = 19/198 (9%)
Query: 423 LGTGSFGSVYKGTLFDGTN-VAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNC 480
LG G++ +VYKG N VA+K L+ E A + E +L+ ++H N++ +
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
LV E++ + L+++L I+ N+ + + L L + H ++H D
Sbjct: 70 HTEKSLTLVFEYL-DKDLKQYLDDCG---NIINMHNVKLFLFQLLRGLAYCHRQKVLHRD 125
Query: 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT----IATIGYMAPEY--GSEGII 594
LKP N+L++E ++DFG+++ I T T + T+ Y P+ GS
Sbjct: 126 LKPQNLLINERGELKLADFGLARA------KSIPTKTYDNEVVTLWYRPPDILLGSTD-Y 178
Query: 595 SPKSDVYSYGILLMETFT 612
S + D++ G + E T
Sbjct: 179 STQIDMWGVGCIFYEMAT 196
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 140/311 (45%), Gaps = 33/311 (10%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL + +N+L+ P + N +KL+ + +++N + + P NL +L L+L +N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FN 116
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+T+ + L N NL L L+SN + I L G SLQ+ +G ++
Sbjct: 117 NQITD--------IDPLKNLTNLNRLELSSNTISDI-SALSG--LTSLQQLN-FGNQVTD 164
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
P + NL+ + D++ ++ + + +L L+ L N++ P +
Sbjct: 165 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDE 220
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 221 LSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 275 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 328
Query: 305 ESLDLSRNNLS 315
+ L S N +S
Sbjct: 329 QRLFFSNNKVS 339
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 17/219 (7%)
Query: 409 DIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNL--QLERASRS-FDSECEI 464
++Q F ++G G+FG V + + + A+K+ N L+RA + F E ++
Sbjct: 68 EMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDV 127
Query: 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS-HNYFLGILERLNIMIDVGL 523
L + + + + + + LV+++ G L L + + R I ++ L
Sbjct: 128 LVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIG-EMVL 186
Query: 524 ALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ-TMTIATIG 582
A++ +H H VH D+KP+N+LLD N ++DFG L DD +Q ++ + T
Sbjct: 187 AIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFG--SCLKMNDDGTVQSSVAVGTPD 241
Query: 583 YMAPEY-----GSEGIISPKSDVYSYGILLMETFTRKKP 616
Y++PE G P+ D +S G+ + E + P
Sbjct: 242 YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAI-KVFNLQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAI K+ + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKI 476
+G+G++GSV Y L VA+K + + A R++ E +L+ ++H N+I +
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 84
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL---ERLNIMIDVGLALEY------ 527
+ F P S+E +S Y + L + NI+ L+ E+
Sbjct: 85 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 130
Query: 528 -----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
L + HS ++H DLKP+N+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 131 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLAR---QADEEM--TGYVATRW 185
Query: 583 YMAPEYGSEGIISPKS-DVYSYGILLMETFTRK 614
Y APE + ++ D++S G ++ E K
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 20/231 (8%)
Query: 396 LLSLATWRRTSYLDIQ-RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLER 453
L W+ +L+ Q + F + +LG G FG V+ + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 454 ASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLG 510
+ + E +IL + R ++ + LV+ M G + +Y+ +
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 511 ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
+ + + L H H +++ DLKP N+LLD++ +SD G++ L G
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-- 342
Query: 571 SVIQTMT---IATIGYMAPE--YGSEGIISPKSDVYSYGILLMETFTRKKP 616
QT T T G+MAPE G E S D ++ G+ L E + P
Sbjct: 343 ---QTKTKGYAGTPGFMAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 30 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 88 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 202
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 203 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 241
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 31 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 89 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 143
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 144 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 203
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 204 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 242
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 22 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 80 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 134
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 135 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 194
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 195 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 233
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 92/215 (42%), Gaps = 40/215 (18%)
Query: 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL-------ERASRSFDSECEILRSIRHRNL 473
+LLG GS+G V + + D + + + + E ++LR +RH+N+
Sbjct: 11 DLLGEGSYGKVKE--VLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNV 68
Query: 474 IKIISNCCNIDFKAL--VLEFMPNGSLE----------KWLYSHNYFLGILERLNIMIDV 521
I+++ N + + + V+E+ G E +H YF +++
Sbjct: 69 IQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID-------- 120
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG--EGDDSVIQTMTIA 579
LEYLH S +VH D+KP N+LL T +S G+++ L DD+ +
Sbjct: 121 --GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ--G 173
Query: 580 TIGYMAPEY--GSEGIISPKSDVYSYGILLMETFT 612
+ + PE G + K D++S G+ L T
Sbjct: 174 SPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITT 208
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 20/231 (8%)
Query: 396 LLSLATWRRTSYLDIQ-RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLER 453
L W+ +L+ Q + F + +LG G FG V+ + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 454 ASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLG 510
+ + E +IL + R ++ + LV+ M G + +Y+ +
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 511 ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
+ + + L H H +++ DLKP N+LLD++ +SD G++ L G
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-- 342
Query: 571 SVIQTMT---IATIGYMAPE--YGSEGIISPKSDVYSYGILLMETFTRKKP 616
QT T T G+MAPE G E S D ++ G+ L E + P
Sbjct: 343 ---QTKTKGYAGTPGFMAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 96/231 (41%), Gaps = 20/231 (8%)
Query: 396 LLSLATWRRTSYLDIQ-RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLER 453
L W+ +L+ Q + F + +LG G FG V+ + G A K N + +
Sbjct: 168 FLRFLQWK---WLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLK 224
Query: 454 ASRSFDS---ECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLG 510
+ + E +IL + R ++ + LV+ M G + +Y+ +
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNP 284
Query: 511 ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
+ + + L H H +++ DLKP N+LLD++ +SD G++ L G
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG-- 342
Query: 571 SVIQTMT---IATIGYMAPE--YGSEGIISPKSDVYSYGILLMETFTRKKP 616
QT T T G+MAPE G E S D ++ G+ L E + P
Sbjct: 343 ---QTKTKGYAGTPGFMAPELLLGEEYDFS--VDYFALGVTLYEMIAARGP 388
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 23 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 81 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 135
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 196 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 234
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 23 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 81 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 135
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + T +AT Y APE
Sbjct: 136 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 195
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 196 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 234
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 457 SFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKW-----LYSHNY--FL 509
F +E +I+ I++ + N D ++ E+M N S+ K+ + NY F+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 510 GILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569
I I+ V + Y+H+ + + H D+KP+NIL+D+N +SDFG S+ +
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFGESEYMV--- 203
Query: 570 DSVIQTMTIATIGYMAPEYGS--EGIISPKSDVYSYGILLMETF 611
D I+ + T +M PE+ S K D++S GI L F
Sbjct: 204 DKKIKG-SRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF 246
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
LE +H H +VH DLKP N L+ + M + DFGI+ + V++ + T+ YM
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 585 APEYGSEGIISPKS-----------DVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
PE + S ++ DV+S G +L K P +I I ++S H
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI-INQISKLH---- 250
Query: 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCME-SPEQRVSMKDAAA 687
++D N E F D + L CC++ P+QR+S+ + A
Sbjct: 251 -------AIIDPN---HEIEFP---DIPEKDLQDVLKCCLKRDPKQRISIPELLA 292
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 97/231 (41%), Gaps = 31/231 (13%)
Query: 404 RTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNL--QLERASRS-FD 459
R + +QR + F ++G G+F V + G A+K+ N L+R S F
Sbjct: 52 RLKEVRLQR--DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 460 SECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
E ++L + R + ++ + ++ LV+E+ G L L +L + I
Sbjct: 110 EERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL----------LTLLSKFGERI 159
Query: 520 DVGLALEYLHH-------GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572
+A YL H VH D+KP+NILLD ++DFG S L D +V
Sbjct: 160 PAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTV 218
Query: 573 IQTMTIATIGYMAPE-------YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ + T Y++PE G P+ D ++ G+ E F + P
Sbjct: 219 RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 100/213 (46%), Gaps = 43/213 (20%)
Query: 423 LGTGSFGSV---YKGTLFDGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKI 476
+G+G++GSV Y L VA+K + + A R++ E +L+ ++H N+I +
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGL 92
Query: 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGIL---ERLNIMIDVGLALEY------ 527
+ F P S+E +S Y + L + NI+ L+ E+
Sbjct: 93 LDV------------FTPATSIED--FSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVY 138
Query: 528 -----LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582
L + HS ++H DLKP+N+ ++E+ + DFG+++ + D+ + T +AT
Sbjct: 139 QLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLAR---QADEEM--TGYVATRW 193
Query: 583 YMAPEYGSEGIISPKS-DVYSYGILLMETFTRK 614
Y APE + ++ D++S G ++ E K
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 141/311 (45%), Gaps = 33/311 (10%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL + +N+L+ P + N +KL+ + +++N + + P NL +L L+L +N
Sbjct: 66 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FN 120
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+T+ + L N NL L L+SN + I L G SLQ+ ++G ++
Sbjct: 121 NQITD--------IDPLKNLTNLNRLELSSNTISDI-SALSG--LTSLQQL-SFGNQVTD 168
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
P + NL+ + D++ ++ + + +L L+ L N++ P +
Sbjct: 169 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDE 224
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 225 LSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 278
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 279 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 332
Query: 305 ESLDLSRNNLS 315
+ L + N +S
Sbjct: 333 QRLFFANNKVS 343
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 95/199 (47%), Gaps = 14/199 (7%)
Query: 423 LGTGSFGSVYKGTLFDGTN--VAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
LG GSF S+ + + +N A+K+ + ++E ++ + ++ H N++K+
Sbjct: 19 LGEGSF-SICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVF 75
Query: 481 CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540
+ LV+E + G L + + +F E IM + A+ H H +VH D
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKKKHF-SETEASYIMRKLVSAVS---HMHDVGVVHRD 131
Query: 541 LKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPK 597
LKP N+L ++N+ + DFG ++ L D+ ++T T+ Y APE ++
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCF-TLHYAAPELLNQNGYDES 189
Query: 598 SDVYSYGILLMETFTRKKP 616
D++S G++L + + P
Sbjct: 190 CDLWSLGVILYTMLSGQVP 208
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 133
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 190
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 133
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 190
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 191 EPLGLEADMWSIGVI 205
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 92/212 (43%), Gaps = 20/212 (9%)
Query: 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDS--ECEILRSIR 469
+ + + LG G++G VYK VAIK L+ E + E +L+ ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYL 528
HRN+I++ S + L+ E+ N L+K++ + + + +++ + G+
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNF--- 147
Query: 529 HHGHSTPMVHCDLKPNNILL-----DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGY 583
HS +H DLKP N+LL E + DFG+++ G T I T+ Y
Sbjct: 148 --CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQF--THEIITLWY 203
Query: 584 MAPEY--GSEGIISPKSDVYSYGILLMETFTR 613
PE GS S D++S + E +
Sbjct: 204 RPPEILLGSRH-YSTSVDIWSIACIWAEMLMK 234
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 64/282 (22%)
Query: 423 LGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSI----------RHR 471
LG G F V + + G A K L++ R D EIL I R
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKF----LKKRRRGQDCRAEILHEIAVLELAKSCPRVI 92
Query: 472 NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMID-------VGLA 524
NL ++ N I L+LE+ G + F L L M+ +
Sbjct: 93 NLHEVYENTSEI---ILILEYAAGGEI---------FSLCLPELAEMVSENDVIRLIKQI 140
Query: 525 LEYLHHGHSTPMVHCDLKPNNILLDENM---TAHVSDFGISKLLGEGDDSVIQTMTIATI 581
LE +++ H +VH DLKP NILL + DFG+S+ +G + + T
Sbjct: 141 LEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE---LREIMGTP 197
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTE 641
Y+APE + I+ +D+++ GI+ T P F+GE + + ++
Sbjct: 198 EYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP----FVGEDNQETYLN--------- 244
Query: 642 VVDANLVREEQAFSVKIDCLLSIMHLALD----CCMESPEQR 679
+ N+ E+ FS S+ LA D +++PE+R
Sbjct: 245 ISQVNVDYSEETFS-------SVSQLATDFIQSLLVKNPEKR 279
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 129/351 (36%), Gaps = 64/351 (18%)
Query: 24 NSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLT- 82
N+ S LI+L L N F L F L +L+VL+L L + + NF LT
Sbjct: 73 NTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNL--DGAVLSGNFFKPLTS 130
Query: 83 ---------------------NCRNLTVLGLASNPLRGILPPLIGNF-----------SA 110
N R VL L N ++ I + NF S
Sbjct: 131 LEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSI 190
Query: 111 SLQEF--YAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRL------RRLQG 162
+LQ+ Y G + GN + + + DL+G NG + R ++Q
Sbjct: 191 TLQDMNEYWLGWEKCGNPFKN----TSITTLDLSG---NGFKESMAKRFFDAIAGTKIQS 243
Query: 163 LYLHGNKLQGS------------IPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRR 210
L L + GS + + + T L +
Sbjct: 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQ 303
Query: 211 LHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSRNQLSGD 269
L L N++ ++F L ++L +NLS N L GS+ S + +NL L LDLS N +
Sbjct: 304 LTLAQNEINKIDDNAFWGLTHLLKLNLSQNFL-GSIDSRMFENLDKLEVLDLSYNHIRAL 362
Query: 270 IPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPK 320
+ GL NL+ L+L NQ + F L SL+ + L N P+
Sbjct: 363 GDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 3/115 (2%)
Query: 211 LHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSN-IQNLKVLTNLDLSRNQLSGD 269
+ L N + +SF L+ + ++ + + + +N + L L L L NQ
Sbjct: 35 VDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQL 94
Query: 270 IPTTIGGLENLETLSLADNQFQGPVPKS--FGSLISLESLDLSRNNLSGEIPKNF 322
GL NLE L+L G V F L SLE L L NN+ P +F
Sbjct: 95 ETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASF 149
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFN--LQLERASRSFDSECEILRSIRHRNLIKII-- 477
+G+G++GSV G VAIK + Q E ++ E +L+ ++H N+I ++
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 478 ----SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI-LERLNIMIDVGLALEYLHHGH 532
S+ N LV+ FM L+K +G+ I V L+ L + H
Sbjct: 92 FTPASSLRNFYDFYLVMPFM-QTDLQK-------IMGLKFSEEKIQYLVYQMLKGLKYIH 143
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
S +VH DLKP N+ ++E+ + DFG+++ D + T + T Y APE
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYRAPEVILSW 198
Query: 593 IISPKS-DVYSYGILLMETFTRK 614
+ ++ D++S G ++ E T K
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 13/244 (5%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNLQL---ERASRSFDSECEILRS 467
R + LG G F Y+ T D V A KV + +E I +S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI-SKLLGEGDDSVIQTMTIATIGYMAP 586
LH+ ++H DLK N+ L+++M + DFG+ +K+ +G+ + T Y+AP
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTPNYIAP 211
Query: 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDA 645
E + S + D++S G +L K P + E ++ E S+P + V A
Sbjct: 212 EVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASA 271
Query: 646 NLVR 649
+ R
Sbjct: 272 LIRR 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 24/203 (11%)
Query: 423 LGTGSFGSVYKGT-LFDGTNVAIKVFN--LQLERASRSFDSECEILRSIRHRNLIKII-- 477
+G+G++GSV G VAIK + Q E ++ E +L+ ++H N+I ++
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 478 ----SNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI-LERLNIMIDVGLALEYLHHGH 532
S+ N LV+ FM L+K +G+ I V L+ L + H
Sbjct: 110 FTPASSLRNFYDFYLVMPFM-QTDLQK-------IMGMEFSEEKIQYLVYQMLKGLKYIH 161
Query: 533 STPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG 592
S +VH DLKP N+ ++E+ + DFG+++ D + T + T Y APE
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEM--TGYVVTRWYRAPEVILSW 216
Query: 593 IISPKS-DVYSYGILLMETFTRK 614
+ ++ D++S G ++ E T K
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 95/208 (45%), Gaps = 21/208 (10%)
Query: 417 FNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFN--LQLERASRSFDSECEILRSIRHRNL 473
+ + +G+G++G+V G VAIK Q E ++ E +L+ +RH N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 474 IKIIS----NCCNIDFKA--LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
I ++ + DF LV+ FM G+ L H L I V L+
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEK----LGEDRIQFLVYQMLKG 140
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
L + H+ ++H DLKP N+ ++E+ + DFG+++ + D + + T Y APE
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXG--XVVTRWYRAPE 195
Query: 588 YGSEGIISPKS-DVYSYGILLMETFTRK 614
+ ++ D++S G ++ E T K
Sbjct: 196 VILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 516 NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575
I + + ALE+LH S ++H D+KP+N+L++ DFGIS L D V +
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLV---DDVAKD 194
Query: 576 MTIATIGYMAPEYGSEGI----ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631
+ Y APE + + S KSD++S GI +E + P + LK V
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 632 KESLPDGLTEVVDANLV 648
+E P + A V
Sbjct: 255 EEPSPQLPADKFSAEFV 271
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 87/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+LE + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 140/311 (45%), Gaps = 33/311 (10%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL + +N+L+ P + N +KL+ + +++N + + P NL +L L+L +N
Sbjct: 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FN 121
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+T+ + L N NL L L+SN + I L G SLQ+ ++G ++
Sbjct: 122 NQITD--------IDPLKNLTNLNRLELSSNTISDI-SALSG--LTSLQQL-SFGNQVTD 169
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
P + NL+ + D++ ++ + + +L L+ L N++ P +
Sbjct: 170 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDE 225
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 226 LSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 280 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 333
Query: 305 ESLDLSRNNLS 315
+ L N +S
Sbjct: 334 QRLFFYNNKVS 344
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 29 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 87 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 141
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + +AT Y APE
Sbjct: 142 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 201
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 202 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 27/228 (11%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTN---VAIKVFN-LQLERASRSFDSECEILRSIRHRN 472
+ + +G G++G V + +D N VAIK + + + + E +IL RH N
Sbjct: 30 YTNLSYIGEGAYGMV--CSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGI----LERLNIMIDVGLALEYL 528
+I I N +A +E M + + + L + + + L +I + L L
Sbjct: 88 IIGI-----NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGL 142
Query: 529 HHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDSVIQTMTIATIGYMAPE 587
+ HS ++H DLKP+N+LL+ + DFG++++ + D + +AT Y APE
Sbjct: 143 KYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPE 202
Query: 588 Y--GSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633
S+G + D++S G +L E + + IF G KH++ +
Sbjct: 203 IMLNSKG-YTKSIDIWSVGCILAEMLSNRP----IFPG----KHYLDQ 241
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 11/243 (4%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNLQL---ERASRSFDSECEILRS 467
R + LG G F Y+ T D V A KV + +E I +S
Sbjct: 39 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 98
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 99 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 157
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH+ ++H DLK N+ L+++M + DFG++ + E D + + T Y+APE
Sbjct: 158 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLC-GTPNYIAPE 212
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDAN 646
+ S + D++S G +L K P + E ++ E S+P + V A
Sbjct: 213 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 272
Query: 647 LVR 649
+ R
Sbjct: 273 IRR 275
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 129/311 (41%), Gaps = 76/311 (24%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL LTLF+N+++ P + N + L L+LSSN+ S + + L SLQ LS + N
Sbjct: 106 LTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI--SALSGLTSLQQLSFSSN 161
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+ L L N L L ++SN + I
Sbjct: 162 QVTD---------LKPLANLTTLERLDISSNKVSDI------------------------ 188
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
++ ++ NL +I + D+ T +G L L L L+GN+L+
Sbjct: 189 SVLAKLTNLESLIATNNQISDI-----TPLGILTNLDELSLNGNQLKD------------ 231
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 232 ----------IG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 276 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 329
Query: 305 ESLDLSRNNLS 315
+ L N +S
Sbjct: 330 QRLFFYNNKVS 340
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 201 CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLD 260
L+ LTSL++L SN++T P +L + +++S+N + S+I L LTNL+
Sbjct: 146 ALSGLTSLQQLSFSSNQVTDLKP--LANLTTLERLDISSNKV-----SDISVLAKLTNLE 198
Query: 261 ---LSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGE 317
+ NQ+S P +G L NL+ LSL NQ + + SL +L LDL+ N +S
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNL 254
Query: 318 IP 319
P
Sbjct: 255 AP 256
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 101/243 (41%), Gaps = 11/243 (4%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTNV-AIKVFNLQL---ERASRSFDSECEILRS 467
R + LG G F Y+ T D V A KV + +E I +S
Sbjct: 23 RTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKS 82
Query: 468 IRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEY 527
+ + +++ + DF +VLE SL + L+ + E M ++Y
Sbjct: 83 LDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTIQGVQY 141
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
LH+ ++H DLK N+ L+++M + DFG++ + E D + + T Y+APE
Sbjct: 142 LHNNR---VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLC-GTPNYIAPE 196
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLPDGLTEVVDAN 646
+ S + D++S G +L K P + E ++ E S+P + V A
Sbjct: 197 VLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVASAL 256
Query: 647 LVR 649
+ R
Sbjct: 257 IRR 259
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 28/224 (12%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFDSEC- 462
LD + T+ FN +LG GSFG V KGT AIK+ L+ + + D EC
Sbjct: 13 LDRVKLTD-FNFLMVLGKGSFGKVMLADRKGT---EELYAIKI--LKKDVVIQDDDVECT 66
Query: 463 ----EILRSIRHRNLIKIISNCCN-IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI 517
+L + + + +C +D V+E++ G L +Y H +G +
Sbjct: 67 MVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL---MY-HIQQVGKFKEPQA 122
Query: 518 MI---DVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574
+ ++ + L +LH +++ DLK +N++LD ++DFG+ K D V
Sbjct: 123 VFYAAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--EHMMDGVTT 177
Query: 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTN 618
T Y+APE + D ++YG+LL E + P +
Sbjct: 178 REFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 17/208 (8%)
Query: 408 LDIQRATNGFNECNLLGTGSFGSVY--KGTLFDGTNVAIKVF---NLQLERASRSFDSEC 462
L Q ++ + LG+G++G V K L G AIK+ ++ S + E
Sbjct: 14 LYFQGLSDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 463 EILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVG 522
+L+ + H N++K+ + LV+E G L + F + + IM V
Sbjct: 73 AVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVL 131
Query: 523 LALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579
YLH + +VH DLKP N+LL+ + + DFG+S G +
Sbjct: 132 SGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLG 185
Query: 580 TIGYMAPEYGSEGIISPKSDVYSYGILL 607
T Y+APE + K DV+S G++L
Sbjct: 186 TAYYIAPEVLRKK-YDEKCDVWSCGVIL 212
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 34/209 (16%)
Query: 417 FNECNLLGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIK 475
F + LG GS+G V+K + DG A+K R+ F + R R L +
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK-------RSMSPFRGPKD-----RARKLAE 106
Query: 476 IISN-------CCNIDFKA------LVLEFMPNG-SLEKWLYSHNYFLGILERLNIMIDV 521
+ S+ CC +A L L+ G SL++ + L + + D
Sbjct: 107 VGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT 166
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
LAL +LH S +VH D+KP NI L + DFG+ LG +Q
Sbjct: 167 LLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE---GDP 220
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLMET 610
YMAPE +G +DV+S G+ ++E
Sbjct: 221 RYMAPEL-LQGSYGTAADVFSLGLTILEV 248
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 53/116 (45%), Gaps = 2/116 (1%)
Query: 205 LTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSR 263
LTSL +L+LG NKL S F L + Y+NLS N L SLP+ + L L L L+
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQ-SLPNGVFDKLTQLKELALNT 109
Query: 264 NQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIP 319
NQL L L+ L L NQ + F L SL+ + L N P
Sbjct: 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 211 LHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQN-LKVLTNLDLSRNQLSGD 269
L L +N L S F L + + L N L SLP+ + N L LT L+LS NQL
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSL 91
Query: 270 IPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314
L L+ L+L NQ Q F L L+ L L +N L
Sbjct: 92 PNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQL 136
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 76/189 (40%), Gaps = 33/189 (17%)
Query: 109 SASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAV-GRLRRLQGLYLHG 167
S + E Y+ G R ++P I + + + N ++P V L L LYL G
Sbjct: 8 SGTTVECYSQG---RTSVPTGIPAQTTYLDLETNSLK---SLPNGVFDELTSLTQLYLGG 61
Query: 168 NKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFG 227
NKLQ S+P + LTSL L+L +N+L S F
Sbjct: 62 NKLQ-SLPNGV-----------------------FNKLTSLTYLNLSTNQLQSLPNGVFD 97
Query: 228 SLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLA 286
L + + L+ N L SLP + L L +L L +NQL L +L+ + L
Sbjct: 98 KLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLH 156
Query: 287 DNQFQGPVP 295
DN + P
Sbjct: 157 DNPWDCTCP 165
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
Query: 201 CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNL 259
C S T++ G + + +P+ Y++L NSL SLP+ + L LT L
Sbjct: 5 CSCSGTTVECYSQGRTSVPTGIPAQ------TTYLDLETNSLK-SLPNGVFDELTSLTQL 57
Query: 260 DLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314
L N+L L +L L+L+ NQ Q F L L+ L L+ N L
Sbjct: 58 YLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQL 112
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 33/311 (10%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL + +N+L+ P + N +KL+ + +++N + + P NL +L L+L +N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FN 116
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+T+ + L N NL L L+SN + I L G SLQ+ +G ++
Sbjct: 117 NQITD--------IDPLKNLTNLNRLELSSNTISDI-SALSG--LTSLQQLN-FGNQVTD 164
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
P + NL+ + D++ ++ + + +L L+ L N++ P +
Sbjct: 165 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDE 220
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 221 LSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 274
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 275 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 328
Query: 305 ESLDLSRNNLS 315
+ L N +S
Sbjct: 329 QRLFFYNNKVS 339
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 2/192 (1%)
Query: 79 SSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIV 138
+S CRNLT+L L SN L I + Q + +LR P L +
Sbjct: 49 ASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 108
Query: 139 FDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHV 198
L+ C L P L LQ LYL N LQ ++P D V
Sbjct: 109 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSV 167
Query: 199 PP-CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLT 257
P L SL RL L N++ P +F L ++ + L AN+L+ + L+ L
Sbjct: 168 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 227
Query: 258 NLDLSRNQLSGD 269
L L+ N D
Sbjct: 228 YLRLNDNPWVCD 239
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 199 PPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTN 258
P L L LHL L P F L + Y+ L N+L ++L LT+
Sbjct: 97 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 156
Query: 259 LDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316
L L N++S GL +L+ L L N+ P +F L L +L L NNLS
Sbjct: 157 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 209 RRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRN-QLS 267
+R+ L N+++ +SF + + + L +N L + L +L LDLS N QL
Sbjct: 34 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 93
Query: 268 GDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316
P T GL L TL L Q P F L +L+ L L N L
Sbjct: 94 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 142
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 67/183 (36%), Gaps = 31/183 (16%)
Query: 144 CDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLA 203
C G VG Q ++LHGN++ HVP A
Sbjct: 17 CPQQGLQAVPVGIPAASQRIFLHGNRI-------------------------SHVPA--A 49
Query: 204 SLTSLRR---LHLGSNKLTSTMPSSFGSLEYVLYINLSANS-LNGSLPSNIQNLKVLTNL 259
S + R L L SN L ++F L + ++LS N+ L P+ L L L
Sbjct: 50 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 109
Query: 260 DLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIP 319
L R L P GL L+ L L DN Q +F L +L L L N +S
Sbjct: 110 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 169
Query: 320 KNF 322
+ F
Sbjct: 170 RAF 172
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 422 LLGTGSFGSVYKGTLFDGTNVAIK-VFNLQLERASRSFDSE---CE-ILRSIR------H 470
+ +GS+G+V G +G VAIK VFN + + + S+ C+ +LR IR H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 471 RNLIKIISNCCNIDFKA-----LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
N++ + + + A LV E M L + ++ + M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
LH +VH DL P NILL +N + DF +++ E +T + Y A
Sbjct: 148 HVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRA 201
Query: 586 PEYGSEGI-ISPKSDVYSYGILLMETFTRK 614
PE + + D++S G ++ E F RK
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 2/192 (1%)
Query: 79 SSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIV 138
+S CRNLT+L L SN L I + Q + +LR P L +
Sbjct: 50 ASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHT 109
Query: 139 FDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHV 198
L+ C L P L LQ LYL N LQ ++P D V
Sbjct: 110 LHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ-ALPDDTFRDLGNLTHLFLHGNRISSV 168
Query: 199 PP-CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLT 257
P L SL RL L N++ P +F L ++ + L AN+L+ + L+ L
Sbjct: 169 PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228
Query: 258 NLDLSRNQLSGD 269
L L+ N D
Sbjct: 229 YLRLNDNPWVCD 240
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 50/118 (42%)
Query: 199 PPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTN 258
P L L LHL L P F L + Y+ L N+L ++L LT+
Sbjct: 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTH 157
Query: 259 LDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316
L L N++S GL +L+ L L N+ P +F L L +L L NNLS
Sbjct: 158 LFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 48/109 (44%), Gaps = 1/109 (0%)
Query: 209 RRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRN-QLS 267
+R+ L N+++ +SF + + + L +N L + L +L LDLS N QL
Sbjct: 35 QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLR 94
Query: 268 GDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316
P T GL L TL L Q P F L +L+ L L N L
Sbjct: 95 SVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA 143
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 67/183 (36%), Gaps = 31/183 (16%)
Query: 144 CDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLA 203
C G VG Q ++LHGN++ HVP A
Sbjct: 18 CPQQGLQAVPVGIPAASQRIFLHGNRI-------------------------SHVPA--A 50
Query: 204 SLTSLRR---LHLGSNKLTSTMPSSFGSLEYVLYINLSANS-LNGSLPSNIQNLKVLTNL 259
S + R L L SN L ++F L + ++LS N+ L P+ L L L
Sbjct: 51 SFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 260 DLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIP 319
L R L P GL L+ L L DN Q +F L +L L L N +S
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170
Query: 320 KNF 322
+ F
Sbjct: 171 RAF 173
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 422 LLGTGSFGSVYKGTLFDGTNVAIK-VFNLQLERASRSFDSE---CE-ILRSIR------H 470
+ +GS+G+V G +G VAIK VFN + + + S+ C+ +LR IR H
Sbjct: 29 FISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHH 88
Query: 471 RNLIKIISNCCNIDFKA-----LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL 525
N++ + + + A LV E M L + ++ + M + L L
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGL 147
Query: 526 EYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
LH +VH DL P NILL +N + DF +++ E +T + Y A
Sbjct: 148 HVLH---EAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTADANKTHYVTHRWYRA 201
Query: 586 PEYGSEGI-ISPKSDVYSYGILLMETFTRK 614
PE + + D++S G ++ E F RK
Sbjct: 202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 420 CNLLGTGSFGSVYK------GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNL 473
C ++G G F V + G F V + F ++ E I ++H ++
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 90
Query: 474 IKIISNCCNIDFKALVLEFMPNGSL---------EKWLYSHNYFLGILERLNIMIDVGLA 524
++++ + +V EFM L ++YS + ++
Sbjct: 91 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI--------- 141
Query: 525 LEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
LE L + H ++H D+KP+ +LL + + + FG++ LGE ++ + T
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GLVAGGRVGTP 199
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLM 608
+MAPE DV+ G++L
Sbjct: 200 HFMAPEVVKREPYGKPVDVWGCGVILF 226
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 538 HCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ-TMTIATIGYMAPEYGSEGIISP 596
H D+KP NIL+ + A++ DFGI+ D+ + Q T+ T+ Y APE SE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 597 KSDVYSYGILLMETFTRKKP 616
++D+Y+ +L E T P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 137/311 (44%), Gaps = 32/311 (10%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
L NL + +N+L+ P + N +KL+ + +++N + + P NL +L L+L +N
Sbjct: 62 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL-FN 116
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+T+ + L N NL L L+SN + I L G SLQ+ ++
Sbjct: 117 NQITD--------IDPLKNLTNLNRLELSSNTISDI-SALSG--LTSLQQLNFSSNQVTD 165
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXX 184
P + NL+ + D++ ++ + + +L L+ L N++ P +
Sbjct: 166 LKP--LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITPLGILTNLDE 221
Query: 185 XXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNG 244
G LASLT+L L L +N++++ P L + + L AN ++
Sbjct: 222 LSLNGNQLKDIG----TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 245 SLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISL 304
P + L LTNL+L+ NQL P I L+NL L+L N P S SL L
Sbjct: 276 ISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKL 329
Query: 305 ESLDLSRNNLS 315
+ L N +S
Sbjct: 330 QRLFFYNNKVS 340
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 201 CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLD 260
L+ LTSL++L+ SN++T P +L + +++S+N + S+I L LTNL+
Sbjct: 146 ALSGLTSLQQLNFSSNQVTDLKP--LANLTTLERLDISSNKV-----SDISVLAKLTNLE 198
Query: 261 ---LSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGE 317
+ NQ+S P +G L NL+ LSL NQ + + SL +L LDL+ N +S
Sbjct: 199 SLIATNNQISDITP--LGILTNLDELSLNGNQLKD--IGTLASLTNLTDLDLANNQISNL 254
Query: 318 IP 319
P
Sbjct: 255 AP 256
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 82/207 (39%), Gaps = 29/207 (14%)
Query: 420 CNLLGTGSFGSVYK------GTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNL 473
C ++G G F V + G F V + F ++ E I ++H ++
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHI 88
Query: 474 IKIISNCCNIDFKALVLEFMPNGSL---------EKWLYSHNYFLGILERLNIMIDVGLA 524
++++ + +V EFM L ++YS + ++
Sbjct: 89 VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI--------- 139
Query: 525 LEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATI 581
LE L + H ++H D+KP+ +LL + + + FG++ LGE ++ + T
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--GLVAGGRVGTP 197
Query: 582 GYMAPEYGSEGIISPKSDVYSYGILLM 608
+MAPE DV+ G++L
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILF 224
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 17/169 (10%)
Query: 412 RATNGFNECNLLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLER--ASRSFDSECEILR 466
+ + + +L+G GS+G VY +D NVAIK N E + E IL
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLA--YDKNANKNVAIKKVNRMFEDLIDCKRILREITILN 82
Query: 467 SIRHRNLIK-----IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDV 521
++ +I+ I + D +VLE + + L+K L+ FL I+ ++
Sbjct: 83 RLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEQHVKTILYNL 140
Query: 522 GLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570
L +++H + ++H DLKP N LL+++ + + DFG+++ + D
Sbjct: 141 LLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 18/195 (9%)
Query: 423 LGTGSFGSVYK-GTLFDGTNVAIKVFNLQLERASR------SFDSECEILRSIRHRNLIK 475
LG+G F V K G A K + ++SR + E IL+ I+H N+I
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP 535
+ N L+ E + G L +L + L E + + + YLH S
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFL-AEKESLTEEEATEFLKQILNGVYYLH---SLQ 134
Query: 536 MVHCDLKPNNI-LLDENMTA---HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE 591
+ H DLKP NI LLD N+ + DFG++ + G++ T ++APE +
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---KNIFGTPEFVAPEIVNY 191
Query: 592 GIISPKSDVYSYGIL 606
+ ++D++S G++
Sbjct: 192 EPLGLEADMWSIGVI 206
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 3/161 (1%)
Query: 202 LASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDL 261
AS L L L N +++ P +F +L + + L +N L L LT LD+
Sbjct: 52 FASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDI 111
Query: 262 SRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKN 321
S N++ + L NL++L + DN ++F L SLE L L + NL+ IP
Sbjct: 112 SENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS-IPT- 169
Query: 322 FSAQSFLSNYALCGPARLQVPSCRKYNSRGFKKVALLVLKY 362
A S L + L + + R Y+ + ++ +L + +
Sbjct: 170 -EALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISH 209
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 128/345 (37%), Gaps = 20/345 (5%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
P+L+ L L +N +S P + N L L L SN + F L +L L ++ N
Sbjct: 55 FPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISEN 114
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
++ + F + NL L + N L I + SL++ C L
Sbjct: 115 KIVI---LLDYMF----QDLYNLKSLEVGDNDLVYISHRAFSGLN-SLEQLTLEKCNLTS 166
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYL-HGNKLQGSIPYDLCHXXX 183
+ + +L G+IV L ++N + RL RL+ L + H L P C
Sbjct: 167 IPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPN--CLYGL 224
Query: 184 XXXXXXXXXXXCGHVPP-CLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSL 242
VP + L LR L+L N +++ S L + I L L
Sbjct: 225 NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQL 284
Query: 243 NGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLI 302
P + L L L++S NQL+ + + NLETL L N +
Sbjct: 285 AVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDC-RLLWVFR 343
Query: 303 SLESLDLSRNNLSGEIPKNFSAQSF-------LSNYALCGPARLQ 340
L+ +R + P+ + F L NY C AR++
Sbjct: 344 RRWRLNFNRQQPTCATPEFVQGKEFKDFPDVLLPNYFTCRRARIR 388
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 421 NLLGTGSFGSVYKGTLFDG---TNVAIKVFNLQLERASRSFDSECEILRSIRHR------ 471
++G GSFG V K +D +VA+K+ + +R R E IL +R +
Sbjct: 103 KVIGKGSFGQVVKA--YDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 472 NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG 531
N+I ++ N + + E + E L N F G L + L+ L
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPL-VRKFAHSILQCLDAL 216
Query: 532 HSTPMVHCDLKPNNILLDENMTA--HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H ++HCDLKP NILL + + V DFG S + + IQ+ Y APE
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVI 271
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
D++S G +L E T
Sbjct: 272 LGARYGMPIDMWSLGCILAELLT 294
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 414 TNGFNECNLLGTGSFGSVY--KGTLFDGTNVAIKVF---NLQLERASRSFDSECEILRSI 468
++ + LG+G++G V K L G AIK+ ++ S + E +L+ +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 469 RHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYL 528
H N++K+ + LV+E G L + F + + IM V YL
Sbjct: 62 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMKQVLSGTTYL 120
Query: 529 HHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585
H + +VH DLKP N+LL+ + + DFG+S G + T Y+A
Sbjct: 121 HKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK---MKERLGTAYYIA 174
Query: 586 PEYGSEGIISPKSDVYSYGILL 607
PE + K DV+S G++L
Sbjct: 175 PEVLRKK-YDEKCDVWSCGVIL 195
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 19/202 (9%)
Query: 421 NLLGTGSFGSVYKG-TLFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIIS 478
LLG G++ V +L +G A+K+ Q + E E L + ++N++++I
Sbjct: 19 ELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIE 78
Query: 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538
+ LV E + GS+ + +F E ++ DV AL++LH + + H
Sbjct: 79 FFEDDTRFYLVFEKLQGGSILAHIQKQKHF-NEREASRVVRDVAAALDFLH---TKGIAH 134
Query: 539 CDLKPNNILLD--ENMT-AHVSDFGISKLLGEGDDSV-IQTMTIAT----IGYMAPEY-- 588
DLKP NIL + E ++ + DF + + + I T + T YMAPE
Sbjct: 135 RDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVE 194
Query: 589 ---GSEGIISPKSDVYSYGILL 607
+ D++S G++L
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVL 216
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 22/203 (10%)
Query: 421 NLLGTGSFGSVYKGTLFDG---TNVAIKVFNLQLERASRSFDSECEILRSIRHR------ 471
++G GSFG V K +D +VA+K+ + +R R E IL +R +
Sbjct: 103 KVIGKGSFGQVVKA--YDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTM 159
Query: 472 NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG 531
N+I ++ N + + E + E L N F G L + L+ L
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSMNLYE--LIKKNKFQGFSLPL-VRKFAHSILQCLDAL 216
Query: 532 HSTPMVHCDLKPNNILLDENMTA--HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYG 589
H ++HCDLKP NILL + + V DFG S + + IQ+ Y APE
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF-----YRAPEVI 271
Query: 590 SEGIISPKSDVYSYGILLMETFT 612
D++S G +L E T
Sbjct: 272 LGARYGMPIDMWSLGCILAELLT 294
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 149 TIPT-AVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTS 207
T+PT A L +L+ L+L N ++ Y VP S
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIPSYAF-----------------NRVP-------S 132
Query: 208 LRRLHLGS-NKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQL 266
LRRL LG +L ++F L + Y+NL +L +P N+ L L L+LS N+L
Sbjct: 133 LRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIP-NLTALVRLEELELSGNRL 190
Query: 267 SGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314
P + GL +L L L Q +F L SLE L+LS NNL
Sbjct: 191 DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 100/245 (40%), Gaps = 36/245 (14%)
Query: 7 NLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYL 66
N +YL L +N + ++ + L +L LS N + F L SL L L N L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 67 MTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNI 126
T + A + +LS L L L +NP+ I P N SL+ K I
Sbjct: 96 TTVPTQA-FEYLSKLRE------LWLRNNPIESI-PSYAFNRVPSLRRLDLGELKRLEYI 147
Query: 127 PQE-IGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXX 185
+ L + +L C+L IP L RL+ L L GN+L DL
Sbjct: 148 SEAAFEGLVNLRYLNLGMCNLKD-IPNLTA-LVRLEELELSGNRL------DLIR----- 194
Query: 186 XXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGS 245
P LTSLR+L L ++ + ++F L+ + +NLS N+L S
Sbjct: 195 -------------PGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MS 240
Query: 246 LPSNI 250
LP ++
Sbjct: 241 LPHDL 245
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 234 YINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGP 293
Y+NL NS+ ++L+ L L LS+N + GL +L TL L DN+
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 294 VPKSFGSLISLESLDLSRNNLSGEIP 319
++F L L L L RNN IP
Sbjct: 99 PTQAFEYLSKLRELWL-RNNPIESIP 123
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
LP+L L LFDN+L+ + SKL L L +N + F + SL+ L L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+ S A + L NL L L L+ I P L L+E G +L
Sbjct: 142 KRLEYISEAAFEGLV------NLRYLNLGMCNLKDI-PNLTA--LVRLEELELSGNRLDL 192
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDL 178
P L+ + L + A L+ L+ L L N L S+P+DL
Sbjct: 193 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 19/164 (11%)
Query: 421 NLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLI 474
+L+G GS+G VY K T NVAIK N E + E IL ++ +I
Sbjct: 32 HLIGRGSYGYVYLAYDKNT---EKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYII 88
Query: 475 K-----IISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529
+ I + D +VLE + + L+K L+ FL I+ ++ L ++H
Sbjct: 89 RLYDLIIPDDLLKFDELYIVLE-IADSDLKK-LFKTPIFLTEEHIKTILYNLLLGENFIH 146
Query: 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573
+ ++H DLKP N LL+++ + V DFG+++ + D+ I
Sbjct: 147 ---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 36/190 (18%)
Query: 421 NLLGTGSFGSVYKG-TLFDGTNVAIK----VFN--LQLERASRSFDSECEILRSIRHRNL 473
+L+GTGS+G V + + VAIK VF + +R R E IL + H ++
Sbjct: 59 HLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR----EIAILNRLNHDHV 114
Query: 474 IKIISNCCNID---FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH 530
+K++ D F L + S K L+ +L L ++ ++ + ++Y+H
Sbjct: 115 VKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH- 173
Query: 531 GHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS 590
S ++H DLKP N L++++ + V DFG+++ T+ Y PE G+
Sbjct: 174 --SAGILHRDLKPANCLVNQDCSVKVCDFGLAR----------------TVDY--PENGN 213
Query: 591 EGI-ISPKSD 599
+ ISP+ D
Sbjct: 214 SQLPISPRED 223
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 51/109 (46%), Gaps = 2/109 (1%)
Query: 205 LTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSR 263
LT+L+ L L N+L S F L + Y+NL+ N L SLP + L LT LDLS
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDLSY 166
Query: 264 NQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRN 312
NQL L L+ L L NQ + F L SL+ + L N
Sbjct: 167 NQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDN 215
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 51/119 (42%), Gaps = 2/119 (1%)
Query: 197 HVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKV 255
H L LT+L L L N+L S F L + + L N L SLP + L
Sbjct: 76 HDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTN 134
Query: 256 LTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314
LT L+L+ NQL L NL L L+ NQ Q F L L+ L L +N L
Sbjct: 135 LTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
LPN++YL L NKL +++ + L L L+ N L F L +L+ L L N
Sbjct: 62 LPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVEN 119
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
L + LT NLT L LA N L+ LP + + +L E +L+
Sbjct: 120 QLQSLPDGV----FDKLT---NLTYLNLAHNQLQS-LPKGVFDKLTNLTELDLSYNQLQS 171
Query: 125 NIPQEI-GNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIP 175
+P+ + L+ + L L RL LQ ++LH N + P
Sbjct: 172 -LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 222
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Query: 152 TAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPP-CLASLTSLRR 210
+A+ L L L L GN+LQ S+P + +P LT+L
Sbjct: 79 SALKELTNLTYLILTGNQLQ-SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTY 137
Query: 211 LHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLDLSRNQLSGD 269
L+L N+L S F L + ++LS N L SLP + L L +L L +NQL
Sbjct: 138 LNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPEGVFDKLTQLKDLRLYQNQLKSV 196
Query: 270 IPTTIGGLENLETLSLADNQFQGPVP 295
L +L+ + L DN + P
Sbjct: 197 PDGVFDRLTSLQYIWLHDNPWDCTCP 222
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 120/319 (37%), Gaps = 63/319 (19%)
Query: 35 LDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLAS 94
LDLS L F L L+VL+LAYN + + A + NL VL L+
Sbjct: 271 LDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGL-------DNLQVLNLSY 323
Query: 95 NPLRGILPPLIGNFSASLQEFY-----AYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGT 149
N L+G +S FY AY L+ N I + + + L DL
Sbjct: 324 N--------LLGELYSS--NFYGLPKVAY-IDLQKNHIAIIQDQTFKFLEKLQTLDLRDN 372
Query: 150 IPTAVGRLRRLQGLYLHGNKL----QGSIPYDLCHXXXXXXXXXXXXXXCGHVP------ 199
T + + + ++L GNKL + ++ +L H VP
Sbjct: 373 ALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILI 432
Query: 200 -------PCLASLT-----SLRRLHLGSNKL-----TSTMPSSFGSLEYVLYINLSANSL 242
C T SL +L LG N L T F L ++ + L+ N L
Sbjct: 433 LNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYL 492
Query: 243 NGSLPSNIQNLKVLTNLDLSRNQLS----GDIPTTIGGLENLETLSLADNQFQGPVPKSF 298
N P +L L L L+ N+L+ D+P NLE L ++ NQ P P F
Sbjct: 493 NSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPA------NLEILDISRNQLLAPNPDVF 546
Query: 299 GSLISLESLDLSRNNLSGE 317
+SL LD++ N E
Sbjct: 547 ---VSLSVLDITHNKFICE 562
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 204 SLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSN--IQNLKVLTNLDL 261
+L +LR L LGS+K+ P +F L ++ + L L+ ++ + +NLK LT LDL
Sbjct: 71 NLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDL 130
Query: 262 SRNQL-SGDIPTTIGGLENLETLSLADNQ 289
S+NQ+ S + + G L +L+++ + NQ
Sbjct: 131 SKNQIRSLYLHPSFGKLNSLKSIDFSSNQ 159
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 73/168 (43%), Gaps = 28/168 (16%)
Query: 149 TIPT-AVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTS 207
T+PT A L +L+ L+L N ++ Y VP S
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIESIPSYAF-----------------NRVP-------S 132
Query: 208 LRRLHLGS-NKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQL 266
LRRL LG +L ++F L + Y+NL +L +P N+ L L L+LS N+L
Sbjct: 133 LRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-DIP-NLTALVRLEELELSGNRL 190
Query: 267 SGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314
P + GL +L L L Q +F L SLE L+LS NNL
Sbjct: 191 DLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL 238
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 100/245 (40%), Gaps = 36/245 (14%)
Query: 7 NLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYL 66
N +YL L +N + ++ + L +L LS N + F L SL L L N L
Sbjct: 36 NTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRL 95
Query: 67 MTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNI 126
T + A + +LS L L L +NP+ I P N SL+ K I
Sbjct: 96 TTVPTQA-FEYLSKLRE------LWLRNNPIESI-PSYAFNRVPSLRRLDLGELKRLEYI 147
Query: 127 PQE-IGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHXXXXX 185
+ L + +L C+L IP L RL+ L L GN+L DL
Sbjct: 148 SEAAFEGLVNLRYLNLGMCNLKD-IPNLTA-LVRLEELELSGNRL------DLIR----- 194
Query: 186 XXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGS 245
P LTSLR+L L ++ + ++F L+ + +NLS N+L S
Sbjct: 195 -------------PGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNL-MS 240
Query: 246 LPSNI 250
LP ++
Sbjct: 241 LPHDL 245
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 234 YINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGP 293
Y+NL NS+ ++L+ L L LS+N + GL +L TL L DN+
Sbjct: 39 YLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTV 98
Query: 294 VPKSFGSLISLESLDLSRNNLSGEIP 319
++F L L L L RNN IP
Sbjct: 99 PTQAFEYLSKLRELWL-RNNPIESIP 123
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 69/174 (39%), Gaps = 10/174 (5%)
Query: 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYN 64
LP+L L LFDN+L+ + SKL L L +N + F + SL+ L L
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGEL 141
Query: 65 YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRG 124
+ S A + L NL L L L+ I P L L+E G +L
Sbjct: 142 KRLEYISEAAFEGLV------NLRYLNLGMCNLKDI-PNLTA--LVRLEELELSGNRLDL 192
Query: 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDL 178
P L+ + L + A L+ L+ L L N L S+P+DL
Sbjct: 193 IRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLEELNLSHNNLM-SLPHDL 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI------RH 470
FN +LG GSFG V GT+ V L+ + + D EC ++ +
Sbjct: 22 FNFLMVLGKGSFGKVMLSER-KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGLALEY 527
L ++ S +D V+E++ G L +Y H +G + + + ++ + L +
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MY-HIQQVGRFKEPHAVFYAAEIAIGLFF 136
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
L S +++ DLK +N++LD ++DFG+ K D V T Y+APE
Sbjct: 137 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPE 191
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D +++G+LL E + P
Sbjct: 192 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 91/209 (43%), Gaps = 19/209 (9%)
Query: 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI------RH 470
FN +LG GSFG V GT+ V L+ + + D EC ++ +
Sbjct: 343 FNFLMVLGKGSFGKVMLSER-KGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 471 RNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI---DVGLALEY 527
L ++ S +D V+E++ G L +Y H +G + + + ++ + L +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDL---MY-HIQQVGRFKEPHAVFYAAEIAIGLFF 457
Query: 528 LHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPE 587
L S +++ DLK +N++LD ++DFG+ K D V T Y+APE
Sbjct: 458 LQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--ENIWDGVTTKXFCGTPDYIAPE 512
Query: 588 YGSEGIISPKSDVYSYGILLMETFTRKKP 616
+ D +++G+LL E + P
Sbjct: 513 IIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 417 FNECNLLGTGSFGSVY----KGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRN 472
+ LG+G++G V K T + I+ ++ S+ + E +L+ + H N
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EVAVLKLLDHPN 97
Query: 473 LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNI-MIDVGLALEYLHHG 531
++K+ + LV+E G L F I+ R+ +D + ++ + G
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGEL---------FDEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 532 ----HSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584
H +VH DLKP N+LL +++ + DFG+S + ++ + T Y+
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---ENQKKMKERLGTAYYI 205
Query: 585 APEYGSEGIISPKSDVYSYGILLM 608
APE + K DV+S G++L
Sbjct: 206 APEVLRKK-YDEKCDVWSIGVILF 228
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 125/329 (37%), Gaps = 73/329 (22%)
Query: 7 NLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYL 66
N+ L L N+L P + T S+L +LD NS S L P L L+VL+L +N L
Sbjct: 26 NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLLKVLNLQHNEL 85
Query: 67 MTESSAAKWNFLSSLT------------------NCRNLTVLGLASNPLR------GILP 102
++ S + F ++LT N +NL L L+ N L G+
Sbjct: 86 -SQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGTGVQL 144
Query: 103 PLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQG 162
+ + + A LR + +GN S + DL+ L P + +L
Sbjct: 145 ENLQELLLAKNKILA----LRSEELEFLGN-SSLRKLDLSSNPLKEFSPGCFQTIGKLFA 199
Query: 163 LYLHGNKLQGSIPYDLCHXXXXXXXXXXXXXXCGHVPPCLASLTSLRRLHLGSNKLTSTM 222
L L+ +L + LC S TS++ L L +N+L +T
Sbjct: 200 LLLNNAQLNPHLTEKLCWEL---------------------SNTSIQNLSLANNQLLATS 238
Query: 223 PSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLET 282
S+F L++ LT LDLS N L + L +L
Sbjct: 239 ESTFSGLKWT----------------------NLTQLDLSYNNLHDVGNGSFSYLPSLRY 276
Query: 283 LSLADNQFQGPVPKSFGSLISLESLDLSR 311
LSL N Q P+SF L +L L L R
Sbjct: 277 LSLEYNNIQRLSPRSFYGLSNLRYLSLKR 305
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 53/120 (44%), Gaps = 2/120 (1%)
Query: 197 HVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVL 256
H+P L S ++ L+L N+L P++F + ++ NS++ P Q L +L
Sbjct: 18 HIPDDLPS--NITVLNLTHNQLRRLPPTNFTRYSQLAILDAGFNSISKLEPELCQILPLL 75
Query: 257 TNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316
L+L N+LS T NL L L N F + +L LDLS N LS
Sbjct: 76 KVLNLQHNELSQISDQTFVFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSS 135
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 205 LTSLRRLHLGSNKLTSTMPSSFG---SLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDL 261
L ++ ++L NK SSF SL+ ++ ++ +++ S PS + L+ LT LDL
Sbjct: 429 LRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDIS-PSPFRPLRNLTILDL 487
Query: 262 SRNQLSGDIPTTIGGLENLETLSLADNQFQ---------GPVPKSFGSLISLESLDLSRN 312
S N ++ + GLENLE L N GPV L L L+L N
Sbjct: 488 SNNNIANINEDLLEGLENLEILDFQHNNLARLWKRANPGGPV-NFLKGLSHLHILNLESN 546
Query: 313 NLSGEIP 319
L EIP
Sbjct: 547 GL-DEIP 552
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 30 SKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKW 75
S L+ L+L+ N S + TF LG L++L L N + + S +W
Sbjct: 381 SPLLTLNLTKNHISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEW 426
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGD 569
E IM D+G A+++L HS + H D+KP N+L +++ ++DFG +K E
Sbjct: 129 EAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETT 182
Query: 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILL 607
+ +QT T Y+APE D++S G+++
Sbjct: 183 QNALQT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 219
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 10/98 (10%)
Query: 513 ERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL---DENMTAHVSDFGISKLLGEGD 569
E IM D+G A+++L HS + H D+KP N+L +++ ++DFG +K E
Sbjct: 110 EAAEIMRDIGTAIQFL---HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETT 163
Query: 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILL 607
+ +QT T Y+APE D++S G+++
Sbjct: 164 QNALQT-PCYTPYYVAPEVLGPEKYDKSCDMWSLGVIM 200
>pdb|2V70|A Chain A, Third Lrr Domain Of Human Slit2
pdb|2V70|B Chain B, Third Lrr Domain Of Human Slit2
pdb|2V70|C Chain C, Third Lrr Domain Of Human Slit2
pdb|2V70|D Chain D, Third Lrr Domain Of Human Slit2
Length = 220
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%)
Query: 202 LASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDL 261
L LR+++ +NK+T +F V I L++N L + L+ L L L
Sbjct: 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLML 112
Query: 262 SRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKN 321
N+++ + GL ++ LSL DNQ P +F +L SL +L+L N +
Sbjct: 113 RSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLA 172
Query: 322 FSAQSFLSNYALCGPARLQVP 342
+ + + G R Q P
Sbjct: 173 WLGEWLRKKRIVTGNPRCQKP 193
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 53/138 (38%), Gaps = 7/138 (5%)
Query: 197 HVPPCLASLTSLRRLHLGSNKLTSTMPSS-FGSLEYVLYINLSANSLNGSLPSNIQNLKV 255
H+P A L L +N+ T + F L + IN S N + +
Sbjct: 29 HIPQYTAEL------RLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASG 82
Query: 256 LTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLS 315
+ + L+ N+L GLE+L+TL L N+ SF L S+ L L N ++
Sbjct: 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQIT 142
Query: 316 GEIPKNFSAQSFLSNYAL 333
P F LS L
Sbjct: 143 TVAPGAFDTLHSLSTLNL 160
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 97/238 (40%), Gaps = 53/238 (22%)
Query: 422 LLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480
LLG+G FGSVY G + D VAIK +++ +R S + + N
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIK--HVEKDRISDWGE-----------------LPNG 55
Query: 481 CNIDFKALVLEFMPNG-----SLEKWLYSHNYFLGILERLNIMIDV-------------- 521
+ + ++L+ + +G L W + F+ ILER+ + D+
Sbjct: 56 TRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEEL 115
Query: 522 -----GLALEYLHHGHSTPMVHCDLKPNNILLDENMTA-HVSDFGISKLLGEGDDSVIQT 575
LE + H H+ ++H D+K NIL+D N + DFG LL + + T
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKD----TVYT 171
Query: 576 MTIATIGYMAPEYGSEGIISPKS-DVYSYGILLMETFTRKKP---TNEIFIGEMSLKH 629
T Y PE+ +S V+S GILL + P EI G++ +
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQ 229
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 516 NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS--DFGISKLLGEGDDSVI 573
NIM + AL YLH + + H D+KP N L N + + DFG+SK + ++
Sbjct: 172 NIMRQIFSALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEY 228
Query: 574 QTMTI--ATIGYMAPEY--GSEGIISPKSDVYSYGILL 607
MT T ++APE + PK D +S G+LL
Sbjct: 229 YGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 106/218 (48%), Gaps = 31/218 (14%)
Query: 411 QRATNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSI- 468
++ + F + G G+FG+V G G +VAIK ++ + R + E +I++ +
Sbjct: 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIK----KVIQDPRFRNRELQIMQDLA 74
Query: 469 --RHRNLIKIISNCCNID-------FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMI 519
H N++++ S + + +V+E++P+ +L + NY+ + I+I
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRC--CRNYYRRQVAPPPILI 131
Query: 520 DVGLALEYLH-----HGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLLGEGDDSVI 573
V L + + H S + H D+KP+N+L++E + T + DFG +K L + +V
Sbjct: 132 KVFL-FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNV- 189
Query: 574 QTMTIATIGYMAPE--YGSEGIISPKSDVYSYGILLME 609
I + Y APE +G++ + D++S G + E
Sbjct: 190 --AYICSRYYRAPELIFGNQHYTT-AVDIWSVGCIFAE 224
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.136 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,518,670
Number of Sequences: 62578
Number of extensions: 786149
Number of successful extensions: 4711
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 327
Number of HSP's that attempted gapping in prelim test: 1705
Number of HSP's gapped (non-prelim): 1766
length of query: 704
length of database: 14,973,337
effective HSP length: 106
effective length of query: 598
effective length of database: 8,340,069
effective search space: 4987361262
effective search space used: 4987361262
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)