Query 005278
Match_columns 704
No_of_seqs 563 out of 5356
Neff 9.9
Searched_HMMs 46136
Date Thu Mar 28 20:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005278.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005278hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 3E-81 6.6E-86 744.6 52.4 667 4-696 258-955 (968)
2 KOG1187 Serine/threonine prote 100.0 4.1E-53 8.9E-58 436.5 26.2 289 401-694 61-354 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.6E-47 3.4E-52 391.4 22.7 259 418-699 44-310 (362)
4 KOG0581 Mitogen-activated prot 100.0 5E-47 1.1E-51 366.8 20.1 252 416-688 80-335 (364)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-47 3.6E-52 388.0 17.0 255 417-695 208-464 (468)
6 KOG0595 Serine/threonine-prote 100.0 2.5E-45 5.5E-50 357.6 17.1 201 413-620 8-217 (429)
7 KOG0615 Serine/threonine prote 100.0 1.8E-45 3.8E-50 357.9 15.8 253 413-687 170-436 (475)
8 KOG1026 Nerve growth factor re 100.0 8.6E-46 1.9E-50 393.7 14.4 259 415-695 486-765 (774)
9 KOG0575 Polo-like serine/threo 100.0 7.8E-45 1.7E-49 371.9 19.2 247 415-687 18-268 (592)
10 KOG0591 NIMA (never in mitosis 100.0 2.1E-45 4.6E-50 339.6 9.3 255 415-690 19-283 (375)
11 KOG0196 Tyrosine kinase, EPH ( 100.0 2.3E-45 5.1E-50 381.9 7.2 269 404-694 609-893 (996)
12 KOG0193 Serine/threonine prote 100.0 1.3E-43 2.9E-48 360.7 13.5 270 410-700 387-661 (678)
13 KOG0600 Cdc2-related protein k 100.0 1.1E-42 2.5E-47 346.8 17.5 267 414-687 116-399 (560)
14 KOG0593 Predicted protein kina 100.0 1.1E-42 2.4E-47 324.9 15.2 265 415-687 2-283 (396)
15 KOG0598 Ribosomal protein S6 k 100.0 7.6E-43 1.6E-47 337.8 13.3 244 413-681 23-270 (357)
16 KOG1095 Protein tyrosine kinas 100.0 1E-42 2.2E-47 384.1 16.0 264 415-700 692-969 (1025)
17 KOG0582 Ste20-like serine/thre 100.0 1.2E-41 2.5E-46 334.5 19.8 261 414-687 25-292 (516)
18 KOG0198 MEKK and related serin 100.0 6.2E-42 1.3E-46 338.8 18.0 256 415-690 17-278 (313)
19 KOG0661 MAPK related serine/th 100.0 4.7E-43 1E-47 347.0 8.6 266 414-688 9-291 (538)
20 KOG0659 Cdk activating kinase 100.0 3.9E-41 8.4E-46 309.5 17.4 264 415-688 2-281 (318)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.5E-41 7.6E-46 353.3 19.0 261 413-694 5-336 (338)
22 KOG0578 p21-activated serine/t 100.0 1.7E-41 3.7E-46 344.5 14.8 249 415-687 273-522 (550)
23 KOG0592 3-phosphoinositide-dep 100.0 3E-41 6.6E-46 339.4 16.0 253 411-687 69-337 (604)
24 KOG0194 Protein tyrosine kinas 100.0 2.1E-41 4.5E-46 349.8 14.6 260 415-697 157-425 (474)
25 KOG4721 Serine/threonine prote 100.0 8.9E-42 1.9E-46 342.8 11.5 247 418-697 127-373 (904)
26 KOG3653 Transforming growth fa 100.0 9.6E-41 2.1E-45 330.3 17.3 277 415-697 210-508 (534)
27 KOG0583 Serine/threonine prote 100.0 3.4E-40 7.4E-45 341.2 19.2 249 412-686 14-273 (370)
28 PHA02988 hypothetical protein; 100.0 1.1E-39 2.4E-44 332.1 20.5 248 420-694 25-281 (283)
29 KOG0597 Serine-threonine prote 100.0 1.7E-40 3.6E-45 333.9 13.9 246 415-687 2-250 (808)
30 KOG1094 Discoidin domain recep 100.0 1.7E-40 3.6E-45 335.1 13.5 263 415-692 538-804 (807)
31 KOG2052 Activin A type IB rece 100.0 2.5E-39 5.5E-44 317.9 20.5 271 410-694 206-505 (513)
32 cd05104 PTKc_Kit Catalytic dom 100.0 1.8E-39 3.8E-44 343.8 19.3 258 414-692 34-374 (375)
33 cd05106 PTKc_CSF-1R Catalytic 100.0 1.9E-39 4E-44 343.2 18.9 259 414-693 37-373 (374)
34 cd05096 PTKc_DDR1 Catalytic do 100.0 3.3E-39 7.2E-44 333.1 20.2 261 415-690 5-303 (304)
35 KOG0605 NDR and related serine 100.0 1.1E-39 2.3E-44 328.8 15.8 247 412-681 138-435 (550)
36 KOG0201 Serine/threonine prote 100.0 1.4E-40 3.1E-45 326.9 9.1 248 415-687 13-262 (467)
37 KOG4257 Focal adhesion tyrosin 100.0 1.4E-39 3E-44 330.3 15.1 257 414-694 388-651 (974)
38 KOG2345 Serine/threonine prote 100.0 9.5E-40 2.1E-44 297.3 12.1 264 412-692 18-300 (302)
39 KOG4278 Protein tyrosine kinas 100.0 5.2E-40 1.1E-44 332.8 11.0 255 415-693 267-524 (1157)
40 PLN00113 leucine-rich repeat r 100.0 1.7E-38 3.7E-43 378.3 25.8 326 3-337 233-582 (968)
41 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.8E-39 1E-43 325.1 17.5 255 415-692 5-265 (266)
42 KOG0616 cAMP-dependent protein 100.0 4.1E-39 8.9E-44 300.6 15.5 237 414-679 43-283 (355)
43 cd05048 PTKc_Ror Catalytic Dom 100.0 7.4E-39 1.6E-43 327.2 18.9 256 415-692 5-283 (283)
44 KOG0663 Protein kinase PITSLRE 100.0 3.3E-39 7.2E-44 305.7 14.8 267 413-687 74-360 (419)
45 cd05108 PTKc_EGFR Catalytic do 100.0 6.5E-39 1.4E-43 332.6 18.5 259 415-696 7-272 (316)
46 PF07714 Pkinase_Tyr: Protein 100.0 1.4E-39 3.1E-44 327.2 12.4 249 419-689 3-259 (259)
47 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.6E-38 3.5E-43 337.0 20.8 259 414-693 36-398 (400)
48 cd05631 STKc_GRK4 Catalytic do 100.0 1.6E-38 3.5E-43 324.5 20.0 249 417-687 2-260 (285)
49 cd05033 PTKc_EphR Catalytic do 100.0 2.2E-38 4.7E-43 320.5 20.4 256 415-692 4-265 (266)
50 KOG0580 Serine/threonine prote 100.0 2.1E-39 4.6E-44 293.7 11.4 248 413-687 20-272 (281)
51 KOG0588 Serine/threonine prote 100.0 6.5E-39 1.4E-43 329.2 15.8 248 414-688 11-263 (786)
52 cd05093 PTKc_TrkB Catalytic do 100.0 1.8E-38 3.9E-43 324.9 19.1 261 414-696 4-283 (288)
53 cd06649 PKc_MEK2 Catalytic dom 100.0 5.7E-38 1.2E-42 327.3 22.6 266 414-688 4-301 (331)
54 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.4E-38 5.2E-43 318.2 18.8 251 415-689 4-255 (256)
55 cd05111 PTK_HER3 Pseudokinase 100.0 3E-38 6.6E-43 321.5 19.5 258 415-695 7-271 (279)
56 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-38 5.2E-43 329.0 18.9 241 421-687 1-250 (323)
57 KOG0589 Serine/threonine prote 100.0 4.3E-39 9.3E-44 326.0 12.8 250 415-688 4-258 (426)
58 KOG1025 Epidermal growth facto 100.0 1.6E-39 3.6E-44 339.4 9.7 255 418-695 699-960 (1177)
59 PTZ00263 protein kinase A cata 100.0 2.1E-38 4.5E-43 330.2 18.0 244 415-687 18-270 (329)
60 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.9E-38 8.4E-43 322.2 19.4 265 415-687 5-284 (288)
61 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.4E-38 9.5E-43 324.5 20.0 268 414-687 4-287 (303)
62 cd05084 PTKc_Fes Catalytic dom 100.0 4.4E-38 9.5E-43 315.6 19.2 248 421-690 1-251 (252)
63 cd05072 PTKc_Lyn Catalytic dom 100.0 3.8E-38 8.3E-43 317.8 18.8 255 414-692 5-261 (261)
64 cd05094 PTKc_TrkC Catalytic do 100.0 3.9E-38 8.4E-43 323.0 19.0 261 415-697 5-287 (291)
65 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.5E-38 1.2E-42 328.1 20.5 253 415-688 1-257 (333)
66 cd05612 STKc_PRKX_like Catalyt 100.0 1.4E-38 3E-43 325.9 15.6 244 415-687 1-253 (291)
67 cd05049 PTKc_Trk Catalytic dom 100.0 3.5E-38 7.6E-43 321.7 18.1 254 415-690 5-279 (280)
68 cd05054 PTKc_VEGFR Catalytic d 100.0 4.8E-38 1E-42 328.0 19.1 260 414-694 6-335 (337)
69 cd05068 PTKc_Frk_like Catalyti 100.0 5.5E-38 1.2E-42 316.6 18.9 255 414-692 5-261 (261)
70 cd05090 PTKc_Ror1 Catalytic do 100.0 5E-38 1.1E-42 320.9 18.8 256 415-692 5-283 (283)
71 cd05148 PTKc_Srm_Brk Catalytic 100.0 3E-38 6.5E-43 318.6 16.5 256 413-692 4-261 (261)
72 PTZ00267 NIMA-related protein 100.0 5.6E-38 1.2E-42 342.2 19.9 250 416-687 68-322 (478)
73 KOG1989 ARK protein kinase fam 100.0 3.4E-38 7.4E-43 337.8 17.7 259 414-695 36-314 (738)
74 cd05585 STKc_YPK1_like Catalyt 100.0 5.2E-38 1.1E-42 325.0 18.4 238 423-686 1-245 (312)
75 KOG0611 Predicted serine/threo 100.0 1.3E-38 2.8E-43 308.0 12.8 246 414-687 52-302 (668)
76 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-37 2.2E-42 318.9 20.1 270 415-693 4-284 (284)
77 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-38 8.7E-43 320.6 16.6 256 413-690 4-276 (277)
78 KOG0585 Ca2+/calmodulin-depend 100.0 2.7E-38 5.9E-43 312.7 14.7 256 411-688 93-372 (576)
79 KOG0658 Glycogen synthase kina 100.0 1.3E-38 2.7E-43 307.7 12.1 260 416-687 25-305 (364)
80 PTZ00426 cAMP-dependent protei 100.0 5.8E-38 1.3E-42 327.3 17.6 245 414-687 29-283 (340)
81 cd07848 STKc_CDKL5 Catalytic d 100.0 1.6E-37 3.5E-42 317.9 20.5 267 415-687 1-283 (287)
82 cd05053 PTKc_FGFR Catalytic do 100.0 8.8E-38 1.9E-42 320.9 18.5 260 412-693 9-292 (293)
83 cd05595 STKc_PKB_beta Catalyti 100.0 8.5E-38 1.8E-42 324.7 18.5 241 421-687 1-250 (323)
84 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.4E-38 1.4E-42 315.0 16.8 252 415-690 4-256 (256)
85 cd06650 PKc_MEK1 Catalytic dom 100.0 1.9E-37 4.1E-42 323.3 20.9 199 414-619 4-204 (333)
86 KOG0199 ACK and related non-re 100.0 1.3E-38 2.9E-43 327.2 11.8 249 418-689 113-369 (1039)
87 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-37 2.8E-42 317.2 18.9 260 414-696 6-272 (279)
88 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-37 3E-42 323.7 19.4 242 421-688 1-251 (328)
89 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-37 3.3E-42 301.2 18.2 268 414-688 10-302 (323)
90 KOG0033 Ca2+/calmodulin-depend 100.0 1E-39 2.2E-44 295.8 2.7 251 414-687 10-266 (355)
91 cd05052 PTKc_Abl Catalytic dom 100.0 1.4E-37 3.1E-42 314.0 18.5 254 415-692 6-262 (263)
92 cd08228 STKc_Nek6 Catalytic do 100.0 5E-37 1.1E-41 310.9 22.4 258 415-693 2-266 (267)
93 cd05091 PTKc_Ror2 Catalytic do 100.0 7.1E-38 1.5E-42 319.9 16.3 254 416-691 6-282 (283)
94 cd05059 PTKc_Tec_like Catalyti 100.0 1.4E-37 3E-42 312.7 18.1 250 416-689 5-255 (256)
95 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.3E-37 5E-42 316.0 19.8 266 418-693 7-282 (283)
96 cd05584 STKc_p70S6K Catalytic 100.0 2.4E-37 5.2E-42 321.5 20.0 241 421-687 2-255 (323)
97 KOG0694 Serine/threonine prote 100.0 5.7E-38 1.2E-42 325.2 14.9 245 411-682 364-613 (694)
98 cd05092 PTKc_TrkA Catalytic do 100.0 1.5E-37 3.2E-42 316.8 17.7 255 415-691 5-280 (280)
99 cd05045 PTKc_RET Catalytic dom 100.0 1.8E-37 4E-42 317.9 18.5 258 416-695 1-289 (290)
100 cd05101 PTKc_FGFR2 Catalytic d 100.0 2.2E-37 4.7E-42 319.5 19.0 261 413-695 13-299 (304)
101 cd05043 PTK_Ryk Pseudokinase d 100.0 2.5E-37 5.4E-42 315.3 19.2 261 413-695 4-279 (280)
102 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.5E-37 5.5E-42 327.6 19.8 259 414-693 36-400 (401)
103 PTZ00283 serine/threonine prot 100.0 1.1E-37 2.4E-42 339.7 17.4 256 411-688 28-297 (496)
104 cd05061 PTKc_InsR Catalytic do 100.0 1.4E-37 3E-42 318.4 17.0 264 413-698 4-284 (288)
105 cd07862 STKc_CDK6 Catalytic do 100.0 5.4E-37 1.2E-41 314.5 21.3 265 415-687 1-286 (290)
106 cd05601 STKc_CRIK Catalytic do 100.0 9.4E-38 2E-42 326.0 15.9 252 415-687 1-262 (330)
107 PLN00034 mitogen-activated pro 100.0 2.9E-37 6.2E-42 325.1 19.6 248 415-688 74-328 (353)
108 cd05035 PTKc_Axl_like Catalyti 100.0 5.8E-37 1.3E-41 311.4 21.1 254 417-692 1-272 (273)
109 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.2E-37 4.8E-42 319.9 18.3 263 414-698 17-305 (307)
110 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-37 2.5E-42 328.5 16.3 253 415-688 1-285 (350)
111 cd05089 PTKc_Tie1 Catalytic do 100.0 3.6E-37 7.8E-42 316.7 19.5 259 415-698 2-281 (297)
112 cd05626 STKc_LATS2 Catalytic d 100.0 3.6E-37 7.8E-42 327.6 20.0 253 416-688 2-305 (381)
113 cd05065 PTKc_EphR_B Catalytic 100.0 6.8E-37 1.5E-41 310.1 21.0 256 415-692 4-268 (269)
114 cd05071 PTKc_Src Catalytic dom 100.0 5.5E-37 1.2E-41 309.3 20.1 254 414-692 5-260 (262)
115 cd05075 PTKc_Axl Catalytic dom 100.0 3.8E-37 8.3E-42 312.6 19.0 253 418-692 2-271 (272)
116 KOG0660 Mitogen-activated prot 100.0 1.7E-37 3.7E-42 299.3 15.4 268 413-687 20-309 (359)
117 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-37 4.2E-42 315.4 16.7 256 413-690 4-276 (277)
118 cd05099 PTKc_FGFR4 Catalytic d 100.0 4E-37 8.6E-42 318.9 19.2 265 414-700 11-301 (314)
119 cd05115 PTKc_Zap-70 Catalytic 100.0 5.1E-37 1.1E-41 308.5 19.2 248 422-692 2-255 (257)
120 cd05085 PTKc_Fer Catalytic dom 100.0 5.9E-37 1.3E-41 307.1 19.6 247 421-690 1-249 (250)
121 cd05055 PTKc_PDGFR Catalytic d 100.0 4.5E-37 9.7E-42 316.4 19.1 258 414-692 34-301 (302)
122 PRK13184 pknD serine/threonine 100.0 5.9E-37 1.3E-41 341.5 21.3 260 415-694 2-292 (932)
123 cd05051 PTKc_DDR Catalytic dom 100.0 8E-37 1.7E-41 314.3 20.7 262 414-690 4-295 (296)
124 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-36 2.4E-41 308.3 21.4 258 415-693 2-266 (267)
125 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-37 6.2E-42 327.0 17.8 252 415-687 1-295 (364)
126 PHA03212 serine/threonine kina 100.0 1.3E-36 2.8E-41 322.4 22.6 262 414-687 91-375 (391)
127 cd05588 STKc_aPKC Catalytic do 100.0 7.5E-37 1.6E-41 318.5 20.5 246 421-686 1-260 (329)
128 cd05116 PTKc_Syk Catalytic dom 100.0 5E-37 1.1E-41 308.8 18.5 247 422-692 2-255 (257)
129 cd05589 STKc_PKN Catalytic dom 100.0 4.1E-37 8.8E-42 320.1 18.4 244 417-687 1-256 (324)
130 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 8.4E-37 1.8E-41 312.0 20.4 260 416-692 5-283 (284)
131 cd05594 STKc_PKB_alpha Catalyt 100.0 2.8E-37 6.1E-42 321.4 17.1 243 421-688 1-252 (325)
132 cd05066 PTKc_EphR_A Catalytic 100.0 5.9E-37 1.3E-41 310.2 18.9 256 415-692 4-266 (267)
133 cd05618 STKc_aPKC_iota Catalyt 100.0 9E-37 2E-41 317.7 20.7 242 421-682 1-250 (329)
134 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3.9E-37 8.5E-42 323.0 18.1 266 416-688 1-290 (338)
135 cd05592 STKc_nPKC_theta_delta 100.0 5.2E-37 1.1E-41 317.8 18.7 240 421-686 1-246 (316)
136 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-36 2.3E-41 318.3 21.2 251 416-687 1-266 (332)
137 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.6E-37 1.2E-41 309.1 18.3 253 414-691 5-259 (260)
138 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.1E-37 1.3E-41 310.4 18.6 257 414-692 4-267 (268)
139 cd05605 STKc_GRK4_like Catalyt 100.0 7E-37 1.5E-41 312.5 19.1 251 416-688 1-261 (285)
140 cd05582 STKc_RSK_N N-terminal 100.0 1.8E-37 4E-42 321.9 15.1 238 421-684 2-245 (318)
141 cd05067 PTKc_Lck_Blk Catalytic 100.0 7E-37 1.5E-41 308.4 18.8 253 414-691 5-259 (260)
142 cd05097 PTKc_DDR_like Catalyti 100.0 8.2E-37 1.8E-41 313.8 19.6 261 415-690 5-294 (295)
143 cd05628 STKc_NDR1 Catalytic do 100.0 6.1E-37 1.3E-41 323.8 19.0 201 415-619 1-238 (363)
144 cd05103 PTKc_VEGFR2 Catalytic 100.0 6.8E-37 1.5E-41 320.7 19.2 260 414-694 6-341 (343)
145 cd05050 PTKc_Musk Catalytic do 100.0 4.1E-37 8.9E-42 315.0 17.1 256 414-691 4-288 (288)
146 cd05056 PTKc_FAK Catalytic dom 100.0 1.3E-36 2.8E-41 308.2 20.5 257 415-695 6-268 (270)
147 cd05625 STKc_LATS1 Catalytic d 100.0 6.7E-37 1.5E-41 326.0 19.1 251 416-687 2-304 (382)
148 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-36 6.5E-41 305.1 23.0 258 415-693 2-266 (267)
149 cd05629 STKc_NDR_like_fungal C 100.0 5.7E-37 1.2E-41 325.9 18.4 253 415-688 1-305 (377)
150 cd05590 STKc_nPKC_eta Catalyti 100.0 5.4E-37 1.2E-41 318.2 17.8 237 421-683 1-242 (320)
151 cd05607 STKc_GRK7 Catalytic do 100.0 1.8E-36 3.9E-41 308.0 21.1 246 423-689 1-251 (277)
152 cd05591 STKc_nPKC_epsilon Cata 100.0 7.9E-37 1.7E-41 317.5 18.9 241 421-687 1-253 (321)
153 cd05057 PTKc_EGFR_like Catalyt 100.0 9.8E-37 2.1E-41 310.7 19.2 260 415-697 7-273 (279)
154 cd05608 STKc_GRK1 Catalytic do 100.0 9E-37 1.9E-41 310.8 18.8 244 423-687 1-256 (280)
155 cd05032 PTKc_InsR_like Catalyt 100.0 5.5E-37 1.2E-41 312.3 17.2 255 414-690 5-276 (277)
156 cd05110 PTKc_HER4 Catalytic do 100.0 6.3E-37 1.4E-41 315.7 17.8 259 415-696 7-272 (303)
157 cd05088 PTKc_Tie2 Catalytic do 100.0 9E-37 2E-41 314.4 18.8 257 414-695 6-283 (303)
158 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.4E-36 3E-41 310.6 20.1 271 415-692 4-283 (284)
159 cd05587 STKc_cPKC Catalytic do 100.0 8.3E-37 1.8E-41 317.8 18.6 241 416-682 1-246 (324)
160 cd05598 STKc_LATS Catalytic do 100.0 3.7E-37 8.1E-42 327.4 16.3 253 415-688 1-301 (376)
161 cd06646 STKc_MAP4K5 Catalytic 100.0 8.1E-37 1.8E-41 309.3 18.0 254 414-688 8-265 (267)
162 cd05041 PTKc_Fes_like Catalyti 100.0 1.5E-36 3.2E-41 304.4 19.6 248 421-690 1-250 (251)
163 cd05596 STKc_ROCK Catalytic do 100.0 7.8E-37 1.7E-41 323.0 18.5 254 413-688 41-304 (370)
164 cd00192 PTKc Catalytic domain 100.0 1.3E-36 2.9E-41 306.7 19.4 248 421-690 1-262 (262)
165 cd06654 STKc_PAK1 Catalytic do 100.0 1.4E-36 3E-41 312.0 19.5 250 414-687 19-269 (296)
166 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-36 2.6E-41 314.8 19.1 240 421-686 1-246 (316)
167 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-36 2.6E-41 306.6 18.6 252 415-691 6-259 (260)
168 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-36 2.6E-41 306.1 18.6 248 421-690 1-256 (257)
169 cd05095 PTKc_DDR2 Catalytic do 100.0 2.1E-36 4.7E-41 310.9 20.8 262 415-691 5-296 (296)
170 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.8E-36 4E-41 305.3 19.8 239 421-689 1-261 (262)
171 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-36 5E-41 304.0 20.4 249 416-688 1-253 (256)
172 cd06624 STKc_ASK Catalytic dom 100.0 2.5E-36 5.4E-41 305.8 20.7 256 410-687 3-264 (268)
173 cd05616 STKc_cPKC_beta Catalyt 100.0 1.2E-36 2.6E-41 316.4 18.3 241 416-682 1-246 (323)
174 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.4E-36 5.3E-41 312.4 20.4 265 415-687 6-285 (309)
175 cd05575 STKc_SGK Catalytic dom 100.0 8.7E-37 1.9E-41 317.4 17.2 237 421-683 1-242 (323)
176 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-36 2.5E-41 315.6 18.1 241 421-687 1-251 (318)
177 cd06643 STKc_SLK Catalytic dom 100.0 2.4E-36 5.2E-41 308.4 20.0 249 417-687 7-261 (282)
178 cd06644 STKc_STK10_LOK Catalyt 100.0 3.5E-36 7.5E-41 308.8 21.3 251 415-687 12-268 (292)
179 cd05621 STKc_ROCK2 Catalytic d 100.0 1.1E-36 2.5E-41 321.2 18.2 256 411-688 39-304 (370)
180 cd05034 PTKc_Src_like Catalyti 100.0 1.6E-36 3.4E-41 306.1 18.4 254 414-691 5-260 (261)
181 cd06612 STKc_MST1_2 Catalytic 100.0 2.4E-36 5.2E-41 303.8 19.6 249 415-687 3-252 (256)
182 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.7E-36 5.8E-41 305.7 20.0 251 422-690 2-268 (269)
183 cd05039 PTKc_Csk_like Catalyti 100.0 1.9E-36 4.1E-41 304.5 18.7 250 414-692 5-256 (256)
184 cd06625 STKc_MEKK3_like Cataly 100.0 3.5E-36 7.6E-41 303.9 20.7 252 415-688 2-260 (263)
185 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-36 3.9E-41 313.7 18.4 240 421-686 1-246 (316)
186 PTZ00036 glycogen synthase kin 100.0 1.6E-36 3.4E-41 326.9 18.7 262 414-687 65-350 (440)
187 cd05060 PTKc_Syk_like Catalyti 100.0 2.7E-36 5.8E-41 303.6 19.0 249 421-693 1-256 (257)
188 cd05058 PTKc_Met_Ron Catalytic 100.0 3.1E-36 6.7E-41 304.1 19.5 251 421-693 1-260 (262)
189 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.5E-36 5.5E-41 306.3 19.0 238 422-689 2-273 (274)
190 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.5E-36 5.4E-41 315.7 19.1 259 415-695 12-296 (334)
191 cd08219 STKc_Nek3 Catalytic do 100.0 3.5E-36 7.6E-41 302.4 19.5 249 416-688 1-252 (255)
192 cd05073 PTKc_Hck Catalytic dom 100.0 4.1E-36 8.9E-41 302.7 19.9 253 414-691 5-259 (260)
193 cd06611 STKc_SLK_like Catalyti 100.0 2E-36 4.3E-41 308.7 17.7 253 414-688 4-262 (280)
194 KOG0032 Ca2+/calmodulin-depend 100.0 4E-36 8.6E-41 310.3 19.9 252 413-688 33-293 (382)
195 cd05602 STKc_SGK1 Catalytic do 100.0 1.7E-36 3.6E-41 315.6 17.3 241 421-687 1-246 (325)
196 cd05112 PTKc_Itk Catalytic dom 100.0 2.4E-36 5.2E-41 303.8 17.8 251 415-689 4-255 (256)
197 cd06656 STKc_PAK3 Catalytic do 100.0 3.7E-36 8E-41 308.9 19.3 250 414-687 18-268 (297)
198 cd05604 STKc_SGK3 Catalytic do 100.0 1.4E-36 2.9E-41 316.3 16.0 242 421-688 1-247 (325)
199 cd06619 PKc_MKK5 Catalytic dom 100.0 4.7E-36 1E-40 305.5 19.7 249 415-688 1-253 (279)
200 KOG0584 Serine/threonine prote 100.0 3.7E-37 8.1E-42 316.1 11.4 243 420-687 45-295 (632)
201 cd05622 STKc_ROCK1 Catalytic d 100.0 3.2E-36 6.8E-41 318.2 18.9 259 408-688 36-304 (371)
202 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.1E-36 1.1E-40 311.9 20.1 243 421-683 1-249 (327)
203 cd06613 STKc_MAP4K3_like Catal 100.0 9.3E-36 2E-40 300.6 21.4 253 415-687 3-259 (262)
204 cd05047 PTKc_Tie Catalytic dom 100.0 4.7E-36 1E-40 304.1 19.1 248 421-693 1-269 (270)
205 cd06615 PKc_MEK Catalytic doma 100.0 1.1E-35 2.4E-40 307.1 22.1 264 415-688 1-287 (308)
206 cd05082 PTKc_Csk Catalytic dom 100.0 9.9E-36 2.1E-40 299.3 21.2 248 415-692 6-256 (256)
207 PHA03207 serine/threonine kina 100.0 4.4E-36 9.4E-41 320.1 19.6 265 414-688 91-375 (392)
208 PHA03211 serine/threonine kina 100.0 5.6E-36 1.2E-40 320.8 20.5 264 414-687 168-454 (461)
209 KOG4279 Serine/threonine prote 100.0 5.3E-37 1.2E-41 314.8 11.8 245 421-687 581-831 (1226)
210 cd06645 STKc_MAP4K3 Catalytic 100.0 6.5E-36 1.4E-40 302.6 19.8 252 415-687 9-264 (267)
211 KOG0599 Phosphorylase kinase g 100.0 7E-37 1.5E-41 281.7 11.3 253 412-687 14-282 (411)
212 KOG4717 Serine/threonine prote 100.0 2.8E-36 6.2E-41 299.9 16.5 247 415-687 18-269 (864)
213 cd06655 STKc_PAK2 Catalytic do 100.0 4.1E-36 8.9E-41 308.3 18.4 249 415-687 19-268 (296)
214 cd05597 STKc_DMPK_like Catalyt 100.0 5.8E-36 1.3E-40 312.1 19.8 255 415-688 1-266 (331)
215 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-35 2.3E-40 301.4 20.9 251 422-690 2-268 (269)
216 cd05044 PTKc_c-ros Catalytic d 100.0 3.2E-36 7E-41 305.3 17.0 248 421-690 1-268 (269)
217 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.7E-36 3.6E-41 305.1 14.8 240 421-690 1-258 (258)
218 cd05603 STKc_SGK2 Catalytic do 100.0 3.3E-36 7.2E-41 312.9 17.2 237 421-683 1-242 (321)
219 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.6E-36 1.6E-40 307.6 19.5 265 415-687 6-285 (301)
220 cd07853 STKc_NLK Catalytic dom 100.0 6.5E-36 1.4E-40 317.2 19.2 266 416-688 1-288 (372)
221 cd07876 STKc_JNK2 Catalytic do 100.0 1E-35 2.2E-40 314.3 20.6 262 413-688 19-315 (359)
222 cd05627 STKc_NDR2 Catalytic do 100.0 2.7E-36 5.9E-41 318.6 16.2 201 415-619 1-238 (360)
223 cd05615 STKc_cPKC_alpha Cataly 100.0 5.3E-36 1.2E-40 311.2 18.2 242 416-683 1-247 (323)
224 cd06631 STKc_YSK4 Catalytic do 100.0 9.1E-36 2E-40 301.2 19.4 251 416-687 1-261 (265)
225 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 5.1E-36 1.1E-40 306.2 17.6 255 415-689 5-267 (284)
226 cd05632 STKc_GRK5 Catalytic do 100.0 9.8E-36 2.1E-40 304.0 19.7 249 417-687 2-260 (285)
227 cd06609 STKc_MST3_like Catalyt 100.0 1E-35 2.2E-40 302.4 19.6 248 415-687 1-250 (274)
228 cd05630 STKc_GRK6 Catalytic do 100.0 1.2E-35 2.6E-40 303.2 20.0 249 417-687 2-260 (285)
229 PTZ00266 NIMA-related protein 100.0 4.5E-36 9.7E-41 335.7 18.1 255 411-687 9-294 (1021)
230 cd06637 STKc_TNIK Catalytic do 100.0 5.5E-36 1.2E-40 304.1 17.0 252 412-687 3-268 (272)
231 cd06638 STKc_myosinIIIA Cataly 100.0 7.7E-36 1.7E-40 305.4 18.1 261 405-688 8-283 (286)
232 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-35 3.6E-40 298.2 20.2 238 421-690 1-259 (259)
233 PF00069 Pkinase: Protein kina 100.0 4.8E-36 1E-40 302.4 16.1 252 417-687 1-256 (260)
234 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-35 3.1E-40 309.1 20.2 255 415-688 1-266 (331)
235 cd06640 STKc_MST4 Catalytic do 100.0 2.9E-35 6.3E-40 299.4 21.9 248 415-688 4-253 (277)
236 KOG0610 Putative serine/threon 100.0 8.3E-36 1.8E-40 291.1 16.7 252 415-687 77-391 (459)
237 cd08221 STKc_Nek9 Catalytic do 100.0 2.1E-35 4.5E-40 297.0 20.3 249 416-688 1-253 (256)
238 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-35 6.9E-40 306.8 22.3 255 415-688 1-266 (332)
239 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-35 3.2E-40 303.6 19.2 264 416-687 1-284 (288)
240 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.8E-35 3.9E-40 302.6 19.9 251 415-687 1-261 (286)
241 KOG0596 Dual specificity; seri 100.0 3.8E-36 8.3E-41 302.6 14.1 256 411-687 357-626 (677)
242 KOG0983 Mitogen-activated prot 100.0 1.5E-36 3.2E-41 279.8 10.2 251 416-688 93-349 (391)
243 cd07868 STKc_CDK8 Catalytic do 100.0 1.7E-35 3.8E-40 307.4 19.7 195 420-620 6-219 (317)
244 cd08227 PK_STRAD_alpha Pseudok 100.0 1.8E-35 3.8E-40 308.3 19.6 265 419-687 2-306 (327)
245 cd06605 PKc_MAPKK Catalytic do 100.0 2.5E-35 5.5E-40 298.0 20.1 252 415-687 1-256 (265)
246 cd05046 PTK_CCK4 Pseudokinase 100.0 1.3E-35 2.9E-40 301.7 18.1 254 415-690 5-274 (275)
247 KOG0574 STE20-like serine/thre 100.0 8.3E-38 1.8E-42 291.3 1.7 249 416-688 34-283 (502)
248 cd07847 STKc_CDKL1_4 Catalytic 100.0 3.9E-35 8.5E-40 300.2 21.5 266 415-687 1-282 (286)
249 cd06628 STKc_MAPKKK_Byr2_like 100.0 2.4E-35 5.2E-40 298.5 19.6 249 416-687 1-263 (267)
250 smart00219 TyrKc Tyrosine kina 100.0 3.3E-35 7.2E-40 295.8 20.6 249 418-689 2-258 (258)
251 cd06642 STKc_STK25-YSK1 Cataly 100.0 9.8E-36 2.1E-40 303.0 16.7 246 416-687 5-252 (277)
252 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-35 4.5E-40 302.0 19.2 264 416-687 1-281 (285)
253 cd05086 PTKc_Aatyk2 Catalytic 100.0 5.3E-35 1.2E-39 295.9 21.7 251 422-690 2-267 (268)
254 PHA03209 serine/threonine kina 100.0 2.2E-35 4.8E-40 310.7 19.6 192 413-617 64-256 (357)
255 KOG4194 Membrane glycoprotein 100.0 2.5E-37 5.4E-42 312.2 4.5 326 3-337 99-427 (873)
256 cd08223 STKc_Nek4 Catalytic do 100.0 4.1E-35 9E-40 295.0 20.6 248 416-687 1-253 (257)
257 KOG0577 Serine/threonine prote 100.0 1.9E-36 4.2E-41 305.7 10.8 245 416-688 27-278 (948)
258 cd06651 STKc_MEKK3 Catalytic d 100.0 4.8E-35 1E-39 296.0 20.9 250 415-687 2-260 (266)
259 KOG0200 Fibroblast/platelet-de 100.0 2.1E-35 4.5E-40 327.5 19.7 258 415-693 296-580 (609)
260 cd07875 STKc_JNK1 Catalytic do 100.0 1.8E-35 3.9E-40 313.0 18.4 265 413-688 22-318 (364)
261 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.3E-35 4.9E-40 299.8 18.4 254 417-692 1-272 (273)
262 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.2E-35 9.2E-40 296.7 20.2 256 415-687 1-263 (267)
263 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.6E-35 1.6E-39 295.7 22.1 254 416-687 2-268 (272)
264 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4.4E-35 9.4E-40 300.5 20.5 269 413-687 3-287 (291)
265 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-35 6.3E-40 301.7 19.0 251 414-688 18-269 (293)
266 cd08528 STKc_Nek10 Catalytic d 100.0 4.4E-35 9.5E-40 296.9 20.1 252 416-690 1-268 (269)
267 cd07874 STKc_JNK3 Catalytic do 100.0 2.6E-35 5.5E-40 310.8 19.0 265 413-688 15-311 (355)
268 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-35 2.3E-40 304.6 15.5 248 417-688 24-272 (292)
269 PTZ00284 protein kinase; Provi 100.0 3.1E-35 6.6E-40 320.9 19.7 267 409-687 123-437 (467)
270 cd05609 STKc_MAST Catalytic do 100.0 3.6E-35 7.9E-40 303.0 19.1 256 415-691 1-273 (305)
271 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.8E-35 8.2E-40 308.1 19.5 266 411-688 11-298 (343)
272 cd08218 STKc_Nek1 Catalytic do 100.0 9.9E-35 2.2E-39 292.0 21.8 248 416-687 1-252 (256)
273 cd06639 STKc_myosinIIIB Cataly 100.0 3.3E-35 7.3E-40 301.4 18.7 259 406-687 13-286 (291)
274 cd07839 STKc_CDK5 Catalytic do 100.0 1.8E-35 3.9E-40 302.3 16.5 266 416-687 1-280 (284)
275 cd06632 STKc_MEKK1_plant Catal 100.0 5E-35 1.1E-39 294.6 19.3 247 416-687 1-254 (258)
276 cd05083 PTKc_Chk Catalytic dom 100.0 2.3E-35 5E-40 296.2 16.8 246 415-691 6-253 (254)
277 cd08217 STKc_Nek2 Catalytic do 100.0 8.1E-35 1.7E-39 294.2 20.8 252 416-688 1-262 (265)
278 cd07832 STKc_CCRK Catalytic do 100.0 9.3E-35 2E-39 297.4 21.4 264 416-687 1-281 (286)
279 cd06636 STKc_MAP4K4_6 Catalyti 100.0 4.4E-35 9.6E-40 299.0 18.6 258 406-687 7-278 (282)
280 KOG0667 Dual-specificity tyros 100.0 4.3E-35 9.3E-40 304.1 18.4 194 416-619 187-390 (586)
281 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.2E-35 4.7E-40 302.1 15.8 263 415-687 1-282 (286)
282 cd05586 STKc_Sck1_like Catalyt 100.0 3.5E-35 7.7E-40 306.5 17.6 236 423-683 1-244 (330)
283 cd06659 STKc_PAK6 Catalytic do 100.0 2.7E-35 5.8E-40 302.4 16.4 247 418-688 24-271 (297)
284 cd07844 STKc_PCTAIRE_like Cata 100.0 8.4E-35 1.8E-39 298.5 20.0 267 415-687 5-287 (291)
285 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.7E-34 3.7E-39 295.4 22.1 255 415-687 1-265 (287)
286 cd05122 PKc_STE Catalytic doma 100.0 1.1E-34 2.4E-39 290.9 20.4 249 416-687 1-250 (253)
287 cd06614 STKc_PAK Catalytic dom 100.0 1.1E-34 2.4E-39 296.7 20.6 253 412-687 16-269 (286)
288 cd07867 STKc_CDC2L6 Catalytic 100.0 1.4E-34 3.1E-39 300.6 21.8 193 421-619 7-218 (317)
289 cd06608 STKc_myosinIII_like Ca 100.0 5.8E-35 1.3E-39 297.1 18.4 253 412-687 3-271 (275)
290 cd08220 STKc_Nek8 Catalytic do 100.0 1.8E-34 3.9E-39 290.1 21.7 247 416-687 1-252 (256)
291 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.3E-34 2.9E-39 295.7 20.8 249 415-687 1-260 (283)
292 cd06626 STKc_MEKK4 Catalytic d 100.0 1.3E-34 2.8E-39 292.6 20.0 252 416-687 1-260 (264)
293 cd07841 STKc_CDK7 Catalytic do 100.0 1.1E-34 2.3E-39 298.7 19.7 265 416-687 1-281 (298)
294 cd06648 STKc_PAK_II Catalytic 100.0 1E-34 2.2E-39 296.5 19.2 247 417-687 21-268 (285)
295 cd06607 STKc_TAO Catalytic dom 100.0 1.9E-34 4.1E-39 298.0 21.5 247 414-688 14-267 (307)
296 cd06652 STKc_MEKK2 Catalytic d 100.0 1.4E-34 3.1E-39 292.4 20.1 250 415-687 2-260 (265)
297 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-34 4E-39 292.2 20.5 253 416-687 1-263 (268)
298 KOG4194 Membrane glycoprotein 100.0 5.4E-37 1.2E-41 309.8 1.9 330 4-342 76-408 (873)
299 cd05580 STKc_PKA Catalytic dom 100.0 1.2E-34 2.5E-39 297.1 18.9 243 415-686 1-252 (290)
300 cd06623 PKc_MAPKK_plant_like C 100.0 4.9E-34 1.1E-38 288.4 23.3 251 415-688 1-256 (264)
301 cd06641 STKc_MST3 Catalytic do 100.0 1.9E-34 4.2E-39 293.4 20.4 247 416-688 5-253 (277)
302 cd06917 STKc_NAK1_like Catalyt 100.0 2E-34 4.2E-39 293.5 19.5 247 416-687 2-254 (277)
303 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-34 2.9E-39 295.8 18.0 264 416-687 1-280 (284)
304 KOG4250 TANK binding protein k 100.0 4.9E-35 1.1E-39 304.2 14.2 274 416-695 14-313 (732)
305 KOG1035 eIF-2alpha kinase GCN2 100.0 2.5E-35 5.4E-40 321.8 12.6 256 411-687 475-870 (1351)
306 cd07831 STKc_MOK Catalytic dom 100.0 3.9E-34 8.4E-39 292.2 20.6 260 417-687 1-278 (282)
307 KOG0579 Ste20-like serine/thre 100.0 6.1E-36 1.3E-40 304.0 7.0 250 416-687 33-288 (1187)
308 cd07843 STKc_CDC2L1 Catalytic 100.0 3.4E-34 7.5E-39 294.2 20.1 266 415-687 5-289 (293)
309 KOG0607 MAP kinase-interacting 100.0 1.8E-35 3.9E-40 278.2 9.5 260 421-687 84-360 (463)
310 cd06635 STKc_TAO1 Catalytic do 100.0 5.4E-34 1.2E-38 295.8 21.0 246 416-689 26-278 (317)
311 cd05578 STKc_Yank1 Catalytic d 100.0 2.3E-34 4.9E-39 289.8 17.6 247 416-686 1-253 (258)
312 cd07833 STKc_CDKL Catalytic do 100.0 3.5E-34 7.6E-39 293.5 19.3 268 415-687 1-284 (288)
313 cd05574 STKc_phototropin_like 100.0 2.8E-34 6E-39 298.2 18.8 252 415-687 1-288 (316)
314 cd06606 STKc_MAPKKK Catalytic 100.0 6.1E-34 1.3E-38 286.8 19.9 251 416-687 1-256 (260)
315 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-34 3.8E-39 295.6 16.1 253 416-688 5-267 (288)
316 KOG1024 Receptor-like protein 100.0 7.3E-35 1.6E-39 281.2 12.0 267 408-696 277-559 (563)
317 PHA03390 pk1 serine/threonine- 100.0 1.3E-33 2.8E-38 285.3 21.7 249 408-687 7-261 (267)
318 cd07842 STKc_CDK8_like Catalyt 100.0 1.1E-33 2.3E-38 294.1 21.2 268 416-687 1-312 (316)
319 cd06657 STKc_PAK4 Catalytic do 100.0 4.2E-34 9.1E-39 292.6 17.8 243 421-687 26-269 (292)
320 cd08225 STKc_Nek5 Catalytic do 100.0 6.4E-34 1.4E-38 286.3 18.8 248 416-687 1-253 (257)
321 cd07835 STKc_CDK1_like Catalyt 100.0 5.8E-34 1.3E-38 291.0 18.1 264 417-687 1-279 (283)
322 cd07840 STKc_CDK9_like Catalyt 100.0 8.4E-34 1.8E-38 290.5 19.3 265 417-687 1-283 (287)
323 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-33 2.7E-38 287.4 20.0 242 422-688 1-255 (279)
324 cd07865 STKc_CDK9 Catalytic do 100.0 8.5E-34 1.8E-38 293.9 19.0 270 414-687 11-306 (310)
325 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-35 2.7E-40 325.6 5.5 253 413-687 1233-1493(1509)
326 cd07864 STKc_CDK12 Catalytic d 100.0 7.3E-34 1.6E-38 293.2 18.1 270 412-687 4-298 (302)
327 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-33 3.3E-38 284.4 20.1 242 423-687 1-251 (262)
328 cd07849 STKc_ERK1_2_like Catal 100.0 6.8E-34 1.5E-38 297.6 18.0 267 414-688 4-292 (336)
329 cd08215 STKc_Nek Catalytic dom 100.0 1.3E-33 2.8E-38 284.1 19.3 248 416-687 1-254 (258)
330 cd07845 STKc_CDK10 Catalytic d 100.0 1.2E-33 2.5E-38 292.5 19.4 267 413-687 5-289 (309)
331 cd07836 STKc_Pho85 Catalytic d 100.0 2E-33 4.3E-38 287.2 20.8 265 416-687 1-280 (284)
332 cd07837 STKc_CdkB_plant Cataly 100.0 1.4E-33 3E-38 290.1 19.6 265 415-687 1-290 (295)
333 cd05118 STKc_CMGC Catalytic do 100.0 1.7E-33 3.6E-38 287.7 20.0 263 417-687 1-279 (283)
334 cd06618 PKc_MKK7 Catalytic dom 100.0 9.1E-34 2E-38 291.3 18.1 253 414-688 14-273 (296)
335 cd06627 STKc_Cdc7_like Catalyt 100.0 1.8E-33 4E-38 282.4 19.7 247 416-687 1-250 (254)
336 PHA02882 putative serine/threo 100.0 1.3E-33 2.9E-38 289.3 19.0 259 414-689 11-293 (294)
337 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-33 2.6E-38 287.6 18.4 243 423-687 1-253 (277)
338 cd05579 STKc_MAST_like Catalyt 100.0 6E-34 1.3E-38 287.9 16.0 245 423-689 1-255 (265)
339 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-33 3.1E-38 297.2 19.5 263 413-687 14-310 (353)
340 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-33 3.2E-38 295.3 19.4 269 413-688 5-295 (337)
341 cd08530 STKc_CNK2-like Catalyt 100.0 1E-33 2.2E-38 284.7 17.2 246 416-687 1-252 (256)
342 cd08216 PK_STRAD Pseudokinase 100.0 2.9E-33 6.3E-38 290.3 20.6 261 421-687 8-294 (314)
343 cd07855 STKc_ERK5 Catalytic do 100.0 1.6E-33 3.5E-38 294.5 18.5 267 414-687 4-293 (334)
344 PHA03210 serine/threonine kina 100.0 1.1E-33 2.3E-38 309.5 17.8 270 413-687 146-453 (501)
345 cd06634 STKc_TAO2 Catalytic do 100.0 2.7E-33 5.9E-38 289.2 19.5 247 415-689 15-268 (308)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 3.6E-33 7.8E-38 291.1 20.5 271 421-695 4-317 (328)
347 PLN00009 cyclin-dependent kina 100.0 2.9E-33 6.3E-38 287.5 19.2 266 415-687 2-283 (294)
348 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.1E-33 8.9E-38 281.5 19.9 250 415-687 2-260 (264)
349 cd07838 STKc_CDK4_6_like Catal 100.0 8.4E-33 1.8E-37 283.1 22.4 263 417-687 1-283 (287)
350 cd05611 STKc_Rim15_like Cataly 100.0 2.8E-33 6.1E-38 282.1 17.9 243 421-689 2-249 (260)
351 KOG0986 G protein-coupled rece 100.0 2.2E-34 4.8E-39 283.1 9.4 248 414-683 184-436 (591)
352 cd06633 STKc_TAO3 Catalytic do 100.0 6.3E-33 1.4E-37 287.1 20.7 244 417-688 23-273 (313)
353 cd05606 STKc_beta_ARK Catalyti 100.0 6.3E-33 1.4E-37 282.1 20.1 241 422-687 1-254 (278)
354 cd07858 STKc_TEY_MAPK_plant Ca 100.0 2.5E-33 5.4E-38 293.3 17.5 271 414-692 4-297 (337)
355 cd05583 STKc_MSK_N N-terminal 100.0 4.6E-33 1E-37 285.0 18.8 255 416-691 1-266 (288)
356 KOG0586 Serine/threonine prote 100.0 1.9E-33 4.1E-38 288.7 15.6 249 412-687 53-305 (596)
357 cd07834 STKc_MAPK Catalytic do 100.0 4.5E-33 9.7E-38 291.0 18.3 272 416-694 1-297 (330)
358 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.4E-33 1.2E-37 289.2 18.4 267 410-688 5-288 (328)
359 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-32 3.1E-37 281.7 21.1 251 416-687 1-267 (290)
360 cd07830 STKc_MAK_like Catalyti 100.0 9.4E-33 2E-37 282.1 19.7 262 417-687 1-279 (283)
361 KOG0690 Serine/threonine prote 100.0 9.6E-34 2.1E-38 267.0 10.4 249 413-687 166-420 (516)
362 cd07879 STKc_p38delta_MAPK13 C 100.0 9.5E-33 2E-37 289.4 19.2 267 414-693 14-304 (342)
363 cd05581 STKc_PDK1 Catalytic do 100.0 2.9E-33 6.4E-38 285.4 14.9 249 415-687 1-276 (280)
364 KOG0604 MAP kinase-activated p 100.0 1.3E-33 2.8E-38 263.7 11.0 252 413-687 59-321 (400)
365 KOG1006 Mitogen-activated prot 100.0 5.8E-35 1.3E-39 268.3 1.6 251 418-687 67-326 (361)
366 cd07854 STKc_MAPK4_6 Catalytic 100.0 4.5E-33 9.7E-38 291.9 15.9 266 414-687 4-299 (342)
367 PTZ00024 cyclin-dependent prot 100.0 1.4E-32 3E-37 287.7 19.2 267 415-687 8-312 (335)
368 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-32 5E-37 286.7 20.7 269 408-688 10-300 (345)
369 cd07866 STKc_BUR1 Catalytic do 100.0 8.2E-33 1.8E-37 286.7 17.0 267 414-687 7-307 (311)
370 cd07829 STKc_CDK_like Catalyti 100.0 1E-32 2.3E-37 281.6 17.5 262 417-687 1-278 (282)
371 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.6E-32 3.6E-37 287.6 18.5 264 410-686 10-296 (343)
372 KOG0612 Rho-associated, coiled 100.0 7.3E-34 1.6E-38 307.9 7.7 258 408-687 68-337 (1317)
373 KOG0666 Cyclin C-dependent kin 100.0 1.4E-33 3.1E-38 264.6 8.6 202 414-619 23-242 (438)
374 cd07857 STKc_MPK1 Catalytic do 100.0 2.6E-32 5.7E-37 285.1 19.2 265 416-686 1-290 (332)
375 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-32 3.5E-37 276.6 15.9 247 416-687 1-256 (260)
376 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-32 6.3E-37 307.3 19.4 145 415-563 4-152 (669)
377 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-32 3.4E-37 287.9 15.4 264 412-687 12-297 (343)
378 KOG1151 Tousled-like protein k 100.0 5.8E-33 1.3E-37 271.7 10.2 257 414-686 462-739 (775)
379 cd05123 STKc_AGC Catalytic dom 100.0 4.9E-32 1.1E-36 271.4 17.3 236 423-684 1-240 (250)
380 KOG4236 Serine/threonine prote 100.0 6.7E-33 1.5E-37 276.6 9.6 242 420-686 569-817 (888)
381 KOG0662 Cyclin-dependent kinas 100.0 4.9E-32 1.1E-36 234.5 13.7 198 416-619 3-205 (292)
382 cd05576 STKc_RPK118_like Catal 100.0 1E-31 2.2E-36 266.4 15.4 222 426-685 4-226 (237)
383 KOG0671 LAMMER dual specificit 100.0 4.3E-32 9.3E-37 262.7 12.0 265 413-687 87-405 (415)
384 KOG0603 Ribosomal protein S6 k 100.0 4.4E-32 9.5E-37 280.2 12.1 240 413-687 320-562 (612)
385 KOG0669 Cyclin T-dependent kin 100.0 2.2E-33 4.8E-38 255.8 2.0 269 414-688 16-315 (376)
386 KOG0984 Mitogen-activated prot 100.0 8.8E-32 1.9E-36 238.5 9.9 213 414-632 45-267 (282)
387 KOG0696 Serine/threonine prote 100.0 8E-32 1.7E-36 261.6 9.5 243 413-681 347-594 (683)
388 KOG0587 Traf2- and Nck-interac 100.0 9.7E-31 2.1E-35 277.4 17.2 258 407-687 11-281 (953)
389 smart00220 S_TKc Serine/Threon 100.0 1.7E-30 3.8E-35 258.7 16.6 238 427-687 1-240 (244)
390 PLN03225 Serine/threonine-prot 100.0 1.5E-30 3.3E-35 285.8 17.5 259 413-687 130-449 (566)
391 PLN03224 probable serine/threo 100.0 2.7E-30 5.8E-35 276.1 18.9 257 413-687 143-499 (507)
392 KOG0614 cGMP-dependent protein 100.0 5.3E-32 1.1E-36 269.5 3.5 242 415-681 420-665 (732)
393 KOG1027 Serine/threonine prote 100.0 5.1E-31 1.1E-35 278.3 8.5 242 419-687 513-766 (903)
394 KOG0608 Warts/lats-like serine 100.0 1.4E-30 3.1E-35 265.3 10.9 215 407-625 618-879 (1034)
395 KOG0444 Cytoskeletal regulator 100.0 8.2E-32 1.8E-36 274.0 0.9 296 5-315 54-352 (1255)
396 KOG0695 Serine/threonine prote 100.0 2.7E-30 5.9E-35 244.6 10.3 248 414-681 249-503 (593)
397 KOG0444 Cytoskeletal regulator 100.0 3.5E-32 7.6E-37 276.7 -4.2 302 4-320 76-380 (1255)
398 KOG0668 Casein kinase II, alph 100.0 4.1E-30 8.8E-35 231.3 9.2 262 413-687 36-321 (338)
399 cd00180 PKc Catalytic domain o 100.0 1.9E-27 4.1E-32 231.2 20.3 210 423-688 1-214 (215)
400 KOG1152 Signal transduction se 100.0 1E-28 2.2E-33 250.0 9.4 197 415-619 561-771 (772)
401 KOG0664 Nemo-like MAPK-related 100.0 2.3E-29 4.9E-34 232.1 2.8 266 417-690 55-345 (449)
402 smart00221 STYKc Protein kinas 99.9 1.6E-26 3.4E-31 227.3 17.7 199 417-619 1-202 (225)
403 KOG1167 Serine/threonine prote 99.9 5.5E-27 1.2E-31 230.7 13.4 270 409-687 30-380 (418)
404 KOG1290 Serine/threonine prote 99.9 9.9E-27 2.1E-31 231.6 15.3 130 415-548 78-221 (590)
405 KOG0670 U4/U6-associated splic 99.9 7.9E-28 1.7E-32 240.5 7.3 265 414-687 431-745 (752)
406 KOG0665 Jun-N-terminal kinase 99.9 2.5E-27 5.4E-32 224.4 10.3 258 415-687 17-309 (369)
407 KOG0472 Leucine-rich repeat pr 99.9 4.2E-30 9.2E-35 249.3 -9.0 151 160-315 390-541 (565)
408 KOG0472 Leucine-rich repeat pr 99.9 4E-30 8.8E-35 249.5 -10.3 316 5-340 113-542 (565)
409 KOG1345 Serine/threonine kinas 99.9 1E-26 2.2E-31 214.8 11.4 255 414-691 23-287 (378)
410 KOG0576 Mitogen-activated prot 99.9 8.9E-28 1.9E-32 247.3 3.3 253 414-687 14-270 (829)
411 smart00750 KIND kinase non-cat 99.9 2.8E-25 6E-30 209.5 14.8 170 496-695 1-172 (176)
412 KOG0195 Integrin-linked kinase 99.9 1.9E-26 4.2E-31 212.7 4.4 249 418-693 193-447 (448)
413 PLN00181 protein SPA1-RELATED; 99.9 1E-25 2.2E-30 261.0 8.7 195 468-687 29-264 (793)
414 PRK15387 E3 ubiquitin-protein 99.9 2.8E-24 6.1E-29 237.5 17.6 265 7-323 202-466 (788)
415 PRK09188 serine/threonine prot 99.9 3.8E-23 8.2E-28 211.9 16.1 167 411-592 14-195 (365)
416 PLN03210 Resistant to P. syrin 99.9 3.1E-22 6.8E-27 238.8 23.3 313 3-337 555-904 (1153)
417 KOG4237 Extracellular matrix p 99.9 2.7E-25 5.9E-30 215.9 -3.1 296 10-316 50-360 (498)
418 KOG1164 Casein kinase (serine/ 99.9 7.4E-22 1.6E-26 204.0 20.2 261 416-695 19-300 (322)
419 KOG1165 Casein kinase (serine/ 99.9 1E-21 2.2E-26 187.0 17.3 263 415-695 28-302 (449)
420 PLN03210 Resistant to P. syrin 99.9 1.1E-21 2.3E-26 234.3 21.7 285 6-313 589-904 (1153)
421 KOG0618 Serine/threonine phosp 99.9 1.9E-24 4.2E-29 230.9 -1.7 304 8-337 158-487 (1081)
422 PRK15387 E3 ubiquitin-protein 99.9 4.4E-22 9.6E-27 220.2 14.8 247 6-301 222-468 (788)
423 KOG4237 Extracellular matrix p 99.9 1.6E-24 3.5E-29 210.5 -5.2 278 6-291 67-359 (498)
424 KOG1163 Casein kinase (serine/ 99.9 1.5E-21 3.3E-26 177.7 13.6 261 413-693 13-285 (341)
425 PRK15370 E3 ubiquitin-protein 99.9 5E-22 1.1E-26 221.4 11.9 247 6-315 178-428 (754)
426 KOG0618 Serine/threonine phosp 99.9 1.1E-23 2.5E-28 225.1 -3.8 282 8-314 179-488 (1081)
427 KOG0590 Checkpoint kinase and 99.9 3.5E-22 7.6E-27 218.7 6.4 261 419-701 322-592 (601)
428 PRK15370 E3 ubiquitin-protein 99.9 2.5E-21 5.5E-26 215.8 13.0 246 54-338 178-427 (754)
429 COG0515 SPS1 Serine/threonine 99.8 4.7E-20 1E-24 193.4 21.3 258 417-688 2-275 (384)
430 KOG1023 Natriuretic peptide re 99.8 1.5E-20 3.1E-25 195.9 13.3 217 465-694 1-226 (484)
431 cd05147 RIO1_euk RIO kinase fa 99.8 1.5E-20 3.3E-25 177.4 12.0 140 420-565 2-167 (190)
432 PRK10359 lipopolysaccharide co 99.8 6.8E-21 1.5E-25 181.0 9.5 172 412-611 28-216 (232)
433 cd00116 LRR_RI Leucine-rich re 99.8 5.2E-22 1.1E-26 206.4 -2.2 284 10-314 2-319 (319)
434 cd00116 LRR_RI Leucine-rich re 99.8 9.7E-22 2.1E-26 204.4 -0.9 236 4-243 21-291 (319)
435 KOG1240 Protein kinase contain 99.8 1.2E-20 2.7E-25 205.2 3.1 250 416-690 24-293 (1431)
436 cd05145 RIO1_like RIO kinase f 99.8 6.4E-19 1.4E-23 167.3 14.1 141 420-567 2-169 (190)
437 PRK12274 serine/threonine prot 99.8 9.5E-19 2.1E-23 162.4 12.9 186 418-619 5-209 (218)
438 KOG4158 BRPK/PTEN-induced prot 99.8 2.4E-19 5.1E-24 174.8 8.2 197 469-689 274-511 (598)
439 KOG1166 Mitotic checkpoint ser 99.8 1.3E-18 2.9E-23 193.8 15.0 198 411-615 694-901 (974)
440 PF14531 Kinase-like: Kinase-l 99.8 1.1E-18 2.3E-23 171.1 11.1 229 418-679 15-288 (288)
441 KOG0603 Ribosomal protein S6 k 99.8 5.6E-20 1.2E-24 190.9 1.7 225 422-682 1-232 (612)
442 KOG0617 Ras suppressor protein 99.8 8.8E-21 1.9E-25 163.8 -3.9 165 130-300 29-194 (264)
443 PRK10345 hypothetical protein; 99.7 1.6E-17 3.5E-22 158.0 14.2 137 417-562 4-156 (210)
444 KOG0617 Ras suppressor protein 99.7 4.8E-20 1E-24 159.2 -4.7 162 154-320 29-191 (264)
445 smart00090 RIO RIO-like kinase 99.7 7.3E-17 1.6E-21 157.7 12.0 143 415-566 28-199 (237)
446 PRK14879 serine/threonine prot 99.7 1.4E-16 2.9E-21 154.9 13.6 134 421-564 2-143 (211)
447 cd05144 RIO2_C RIO kinase fami 99.7 2.4E-16 5.3E-21 151.0 13.4 142 411-566 11-176 (198)
448 PRK09605 bifunctional UGMP fam 99.7 3.4E-16 7.3E-21 173.0 15.9 137 414-564 332-476 (535)
449 TIGR03724 arch_bud32 Kae1-asso 99.7 3.5E-16 7.6E-21 150.4 12.5 130 422-564 1-138 (199)
450 KOG1033 eIF-2alpha kinase PEK/ 99.7 2.7E-17 5.9E-22 167.8 2.4 122 485-612 330-457 (516)
451 KOG0606 Microtubule-associated 99.6 1.6E-16 3.6E-21 173.4 5.3 212 414-683 82-307 (1205)
452 cd05120 APH_ChoK_like Aminogly 99.6 6.3E-15 1.4E-19 135.0 12.8 135 419-564 2-138 (155)
453 KOG0590 Checkpoint kinase and 99.6 7.9E-17 1.7E-21 176.7 -0.9 256 414-686 19-284 (601)
454 cd05119 RIO RIO kinase family, 99.6 1.5E-14 3.2E-19 137.6 12.2 137 420-566 2-165 (187)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.1E-13 2.4E-18 135.6 13.7 135 421-565 37-192 (239)
456 KOG0532 Leucine-rich repeat (L 99.5 4.6E-16 1E-20 158.8 -3.8 177 132-317 73-249 (722)
457 KOG1909 Ran GTPase-activating 99.5 1.1E-15 2.4E-20 147.7 -2.5 247 25-291 25-311 (382)
458 KOG1909 Ran GTPase-activating 99.5 1E-15 2.2E-20 147.9 -3.5 247 48-315 24-311 (382)
459 PLN03150 hypothetical protein; 99.5 1.2E-13 2.6E-18 154.3 10.2 112 232-345 420-538 (623)
460 COG4886 Leucine-rich repeat (L 99.5 1.1E-13 2.4E-18 148.0 8.1 198 34-248 97-295 (394)
461 KOG0532 Leucine-rich repeat (L 99.4 2.2E-15 4.8E-20 153.9 -4.8 200 58-298 54-253 (722)
462 TIGR01982 UbiB 2-polyprenylphe 99.4 6.2E-13 1.3E-17 141.8 12.1 145 416-567 119-309 (437)
463 KOG1266 Protein kinase [Signal 99.4 3.2E-13 6.9E-18 129.5 6.8 202 463-688 119-331 (458)
464 COG4886 Leucine-rich repeat (L 99.4 3.4E-13 7.4E-18 144.2 7.7 194 89-292 97-291 (394)
465 KOG3207 Beta-tubulin folding c 99.4 8.1E-14 1.8E-18 138.5 1.4 212 28-268 119-340 (505)
466 KOG3207 Beta-tubulin folding c 99.4 8.6E-14 1.9E-18 138.3 1.5 185 4-195 119-314 (505)
467 KOG1243 Protein kinase [Genera 99.3 1.4E-11 3E-16 130.1 14.5 168 436-615 34-201 (690)
468 KOG0601 Cyclin-dependent kinas 99.3 2.4E-12 5.3E-17 134.7 7.5 248 416-687 115-378 (524)
469 PRK04750 ubiB putative ubiquin 99.3 8.8E-12 1.9E-16 134.3 9.2 146 414-567 119-316 (537)
470 cd05151 ChoK Choline Kinase (C 99.3 2.1E-11 4.6E-16 113.9 10.1 131 420-564 3-136 (170)
471 PF14580 LRR_9: Leucine-rich r 99.3 7.4E-12 1.6E-16 114.4 6.4 139 13-165 4-147 (175)
472 KOG1259 Nischarin, modulator o 99.2 9.7E-13 2.1E-17 124.4 -0.5 131 156-292 282-413 (490)
473 KOG0531 Protein phosphatase 1, 99.2 8.7E-13 1.9E-17 141.2 -1.8 248 28-319 70-322 (414)
474 KOG1259 Nischarin, modulator o 99.2 1.4E-12 2.9E-17 123.4 -0.3 133 181-319 283-416 (490)
475 cd05146 RIO3_euk RIO kinase fa 99.2 4E-10 8.7E-15 105.2 14.3 137 421-566 3-175 (197)
476 COG3642 Mn2+-dependent serine/ 99.2 3E-10 6.5E-15 101.7 12.5 131 421-564 2-140 (204)
477 PF14580 LRR_9: Leucine-rich r 99.2 1.6E-11 3.5E-16 112.2 3.4 121 183-309 20-147 (175)
478 PLN03150 hypothetical protein; 99.2 6.4E-11 1.4E-15 132.5 8.5 114 207-320 419-533 (623)
479 KOG0531 Protein phosphatase 1, 99.2 3E-12 6.5E-17 137.0 -2.1 243 29-316 48-291 (414)
480 KOG3087 Serine/threonine prote 99.1 1.1E-09 2.5E-14 97.3 12.2 142 419-564 11-165 (229)
481 KOG0601 Cyclin-dependent kinas 99.1 9.8E-11 2.1E-15 122.8 5.6 249 411-691 261-517 (524)
482 KOG4658 Apoptotic ATPase [Sign 99.1 8.1E-11 1.7E-15 134.3 5.0 287 6-307 523-824 (889)
483 cd05154 ACAD10_11_like Acyl-Co 99.1 1.2E-09 2.6E-14 107.0 12.7 143 420-564 3-206 (223)
484 COG4248 Uncharacterized protei 99.1 5.9E-09 1.3E-13 104.1 16.8 265 419-699 15-307 (637)
485 PF13855 LRR_8: Leucine rich r 99.0 4.6E-10 1E-14 84.3 3.7 61 6-66 1-61 (61)
486 KOG0606 Microtubule-associated 99.0 1.4E-10 3E-15 127.8 0.7 251 412-683 801-1084(1205)
487 PF13855 LRR_8: Leucine rich r 98.9 8.5E-10 1.8E-14 82.8 3.7 61 30-97 1-61 (61)
488 COG5238 RNA1 Ran GTPase-activa 98.9 1.3E-10 2.8E-15 108.8 -1.4 258 27-316 27-317 (388)
489 PF01163 RIO1: RIO1 family; I 98.9 1.5E-08 3.3E-13 94.4 11.9 127 430-566 1-157 (188)
490 KOG4658 Apoptotic ATPase [Sign 98.9 2.2E-09 4.8E-14 122.7 6.8 277 26-317 519-809 (889)
491 COG5238 RNA1 Ran GTPase-activa 98.9 8.7E-11 1.9E-15 109.9 -4.3 180 129-319 87-289 (388)
492 KOG3741 Poly(A) ribonuclease s 98.8 9.7E-08 2.1E-12 98.2 16.0 166 428-615 289-474 (655)
493 KOG1859 Leucine-rich repeat pr 98.8 4E-11 8.7E-16 126.3 -9.3 127 183-315 165-292 (1096)
494 PRK15123 lipopolysaccharide co 98.8 1.2E-07 2.5E-12 94.1 14.0 139 422-564 29-194 (268)
495 KOG2982 Uncharacterized conser 98.7 2.5E-09 5.4E-14 101.7 0.7 188 132-319 69-266 (418)
496 COG0478 RIO-like serine/threon 98.7 1.2E-07 2.7E-12 90.4 11.1 132 419-563 95-250 (304)
497 KOG2982 Uncharacterized conser 98.7 6.4E-09 1.4E-13 98.9 1.5 81 230-310 199-287 (418)
498 KOG1859 Leucine-rich repeat pr 98.7 2.9E-10 6.3E-15 120.0 -8.6 154 81-243 105-267 (1096)
499 KOG2137 Protein kinase [Signal 98.6 1.5E-08 3.3E-13 108.0 3.7 152 518-686 105-263 (700)
500 KOG2120 SCF ubiquitin ligase, 98.6 2.1E-09 4.5E-14 102.2 -4.5 177 7-191 186-372 (419)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=3e-81 Score=744.65 Aligned_cols=667 Identities=30% Similarity=0.488 Sum_probs=465.5
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccch----------
Q 005278 4 MLPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAA---------- 73 (704)
Q Consensus 4 ~l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~---------- 73 (704)
.+++|+.|+|++|.+++.+|..+.++++|++|+|++|.+++..|..|.++++|++|++++|.+.......
T Consensus 258 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 337 (968)
T PLN00113 258 NLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVL 337 (968)
T ss_pred CCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEE
Confidence 3555666666666666556666666666666666666666555555566666666666655554332221
Q ss_pred -------hhcccccCCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcC
Q 005278 74 -------KWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDL 146 (704)
Q Consensus 74 -------~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 146 (704)
.-.++..+..+++|+.|+|++|++.+..|..+..+ .+|+.|++.+|.+.+.+|..++++++|+.|++++|.+
T Consensus 338 ~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~-~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l 416 (968)
T PLN00113 338 QLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSS-GNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSF 416 (968)
T ss_pred ECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCc-CCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEe
Confidence 00012224444455555555555554444444443 2455555555555555555666666666666666666
Q ss_pred ccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcc
Q 005278 147 NGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSF 226 (704)
Q Consensus 147 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 226 (704)
++..|..|..+++|+.|++++|++++.+|..+..+++|+.|+|++|++.+.+|..+ ..++|+.|++++|++++..|..+
T Consensus 417 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~ 495 (968)
T PLN00113 417 SGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKL 495 (968)
T ss_pred eeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhh
Confidence 66666666666666666666666666666666666777777777777766666544 34778888888888888888888
Q ss_pred cCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccce
Q 005278 227 GSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLES 306 (704)
Q Consensus 227 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 306 (704)
..+++|+.|++++|.+.+.+|..+.++++|+.|++++|++++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.
T Consensus 496 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~ 575 (968)
T PLN00113 496 GSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQ 575 (968)
T ss_pred hhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecccCCCCCCCCC-----cccccccCcccccCCCc-cCCCcccCCCcccccceeeEEEEeecchhhHHHHHHHHH--h
Q 005278 307 LDLSRNNLSGEIPKN-----FSAQSFLSNYALCGPAR-LQVPSCRKYNSRGFKKVALLVLKYILPPITSIVLIAIVI--I 378 (704)
Q Consensus 307 L~l~~N~l~~~~p~~-----~~~~~~l~~~~l~g~~~-~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~ 378 (704)
|++++|++.|.+|.. +...++.+|..+||.+. ...+.|..... . ... ..+++.++++++++++++ +
T Consensus 576 l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~---~--~~~-~~~~~~~~~~~~~~~~~~~~~ 649 (968)
T PLN00113 576 VNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK---T--PSW-WFYITCTLGAFLVLALVAFGF 649 (968)
T ss_pred EeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc---c--cee-eeehhHHHHHHHHHHHHHHHH
Confidence 999999999999863 34455778888898653 33456643211 1 111 112221222222222222 2
Q ss_pred hhhhhccCC-CCCCCchh-hhhhccc--cccchHHHHHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchh
Q 005278 379 FFIRHRNRS-TKDGDQED-LLSLATW--RRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLER 453 (704)
Q Consensus 379 ~~~~~r~~~-~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~ 453 (704)
+++|+|++. .+..+.++ ....... ..............|...+.||+|+||.||+|+. .++..||||++.....
T Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~- 728 (968)
T PLN00113 650 VFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS- 728 (968)
T ss_pred HHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-
Confidence 222322211 11111100 0000000 0001122333445677888999999999999986 5789999998864321
Q ss_pred hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCC
Q 005278 454 ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS 533 (704)
Q Consensus 454 ~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~ 533 (704)
....|++.+++++||||++++|++.+.+..++||||+++|+|.++++. ++|..+.+++.|+++|++|||+.++
T Consensus 729 ---~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~ 801 (968)
T PLN00113 729 ---IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCS 801 (968)
T ss_pred ---ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCC
Confidence 223568899999999999999999999999999999999999999963 7899999999999999999987668
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhC
Q 005278 534 TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTR 613 (704)
Q Consensus 534 ~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg 613 (704)
++|+||||||+||+++.++.+++. ||.+..... .....+|++|+|||++.+..++.++|||||||++|||+||
T Consensus 802 ~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg 874 (968)
T PLN00113 802 PAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTG 874 (968)
T ss_pred CCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhC
Confidence 999999999999999999988875 665543321 1123578999999999999999999999999999999999
Q ss_pred CCCCCccccccccHHHHHHhhcCCC-cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 614 KKPTNEIFIGEMSLKHWVKESLPDG-LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 614 ~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
+.||+...........|.+...... ....+|+.+... .........++.+++.+||+.||++||+|+||+++|+++
T Consensus 875 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 875 KSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGD---VSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCC---CCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9999766666677888877554433 334445444221 112234566788999999999999999999999999998
Q ss_pred HHHh
Q 005278 693 KEKF 696 (704)
Q Consensus 693 ~~~~ 696 (704)
.+..
T Consensus 952 ~~~~ 955 (968)
T PLN00113 952 SRSS 955 (968)
T ss_pred hccc
Confidence 6643
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-53 Score=436.46 Aligned_cols=289 Identities=42% Similarity=0.692 Sum_probs=249.7
Q ss_pred cccccchHHHHHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeee
Q 005278 401 TWRRTSYLDIQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNC 480 (704)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 480 (704)
....|++.++..+|++|...+.||+|+||.||+|.+.+|+.||||++........++|.+|++++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 56779999999999999999999999999999999999999999988654332145699999999999999999999999
Q ss_pred eeCC-eEEEEEeccCCCCHHHHHhhCCC-ccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 481 CNID-FKALVLEFMPNGSLEKWLYSHNY-FLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 481 ~~~~-~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
.+.+ ..+||||||++|+|.++++.... .++|..|++||.++|+||+|||+...++||||||||+|||+|+++++||+|
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsD 220 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSD 220 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccC
Confidence 9988 59999999999999999997665 789999999999999999999998888999999999999999999999999
Q ss_pred eccceecCCCCCcceeccc-cccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccc-cccccHHHHHHhhcC
Q 005278 559 FGISKLLGEGDDSVIQTMT-IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIF-IGEMSLKHWVKESLP 636 (704)
Q Consensus 559 fgla~~~~~~~~~~~~~~~-~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~-~~~~~~~~~~~~~~~ 636 (704)
||+|+........ .... .||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... .++..+..|+.....
T Consensus 221 FGLa~~~~~~~~~--~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~ 298 (361)
T KOG1187|consen 221 FGLAKLGPEGDTS--VSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLE 298 (361)
T ss_pred ccCcccCCccccc--eeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHH
Confidence 9999655331111 1112 79999999999999999999999999999999999999887643 445669999988777
Q ss_pred CC-cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 637 DG-LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 637 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
.+ +.+++|+.+...... ......++..++..|++.+|++||+|.||+++|+.+..
T Consensus 299 ~~~~~eiiD~~l~~~~~~---~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 299 EGKLREIVDPRLKEGEYP---DEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred CcchhheeCCCccCCCCC---hHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 75 889999988631111 11456779999999999999999999999999966543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-47 Score=391.41 Aligned_cols=259 Identities=30% Similarity=0.457 Sum_probs=215.3
Q ss_pred CccccccccCceEEEEEEECCCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-eEEEEEeccC
Q 005278 418 NECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCNID-FKALVLEFMP 494 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~~~ 494 (704)
...+.+|+|+||+||+|.+.....||||++...... ..+.|.+|+.++.+++|||||+++|+|.++. ..++|||||+
T Consensus 44 ~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~ 123 (362)
T KOG0192|consen 44 PIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMP 123 (362)
T ss_pred hhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCC
Confidence 334569999999999999875555999999765322 2568999999999999999999999999987 7899999999
Q ss_pred CCCHHHHHhh-CCCccCHHHHHHHHHHHHHHHHHHHhcCCCC-cEecCCCCCCeeeCCCC-cEEEeeeccceecCCCCCc
Q 005278 495 NGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTP-MVHCDLKPNNILLDENM-TAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 495 ~gsL~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~-ivH~dlk~~Nil~~~~~-~~kl~Dfgla~~~~~~~~~ 571 (704)
+|+|.++++. .+..+++..++.++.+||+||+|||. .+ ||||||||+|||++.++ ++||+|||+++......
T Consensus 124 ~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-- 198 (362)
T KOG0192|consen 124 GGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-- 198 (362)
T ss_pred CCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecccc--
Confidence 9999999998 47789999999999999999999954 55 99999999999999998 99999999998765432
Q ss_pred ceeccccccccccCCcccC--CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 572 VIQTMTIATIGYMAPEYGS--EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
...+...||+.|||||++. ...++.|+|||||||++|||+||+.||.+..... ....+ ..
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~--~~~~v----------------~~ 260 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQ--VASAV----------------VV 260 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHH--HHHHH----------------Hh
Confidence 2334468999999999999 6699999999999999999999999998854411 11111 00
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhhh
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDD 699 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~ 699 (704)
...+...+..|+..+..++..||+.||++||++.|++..|+.+...+...
T Consensus 261 ~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 261 GGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred cCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 11122233347788999999999999999999999999999998877653
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5e-47 Score=366.81 Aligned_cols=252 Identities=25% Similarity=0.333 Sum_probs=208.0
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-eEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNID-FKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 492 (704)
+.+..+.||+|..|+|||++++ +++-+|+|++.... ....+++.+|+++++..+||+||.++|+|.... ...++|||
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY 159 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY 159 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence 4455679999999999999965 78999999996554 345678999999999999999999999999988 49999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
|++|+|++++...+ .+++...-+|+.+|.+||.|||+ +++||||||||+|||++..|++||||||.+..+...
T Consensus 160 MDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---- 232 (364)
T KOG0581|consen 160 MDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---- 232 (364)
T ss_pred cCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh----
Confidence 99999999998664 38999999999999999999974 477999999999999999999999999999877543
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....+||..|||||.+.+..|+.++||||||++++|+.+|+.||............... .+++ ...+
T Consensus 233 ~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~--------~Iv~----~ppP 300 (364)
T KOG0581|consen 233 IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLC--------AIVD----EPPP 300 (364)
T ss_pred hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHH--------HHhc----CCCC
Confidence 234568999999999999999999999999999999999999999764221111111111 1111 1111
Q ss_pred hhhhhH-HHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 653 AFSVKI-DCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 653 ~~~~~~-~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+. .+++++.+++..|+++||.+||+++|+++.
T Consensus 301 --~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 301 --RLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred --CCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 1222 478889999999999999999999999753
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-47 Score=387.97 Aligned_cols=255 Identities=29% Similarity=0.489 Sum_probs=219.2
Q ss_pred CCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+..++.||+|.||+||.|.++....||+|.++.. ....+.|.+|+++|++++|++||+++|+|..++.++||||||+.|
T Consensus 208 l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 208 LKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 3456789999999999999998889999998764 344578999999999999999999999999988999999999999
Q ss_pred CHHHHHhh-CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 497 SLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 497 sL~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
+|.+||+. .+..+...+...++.|||+||+|| .++++|||||.++||||+++..+||+|||+|+...+.. .....
T Consensus 287 sLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YL---es~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~~~~ 362 (468)
T KOG0197|consen 287 SLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYL---ESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YTASE 362 (468)
T ss_pred cHHHHhhhcCCCccchHHHHHHHHHHHHHHHHH---HhCCccchhhhhhheeeccCceEEEcccccccccCCCc-eeecC
Confidence 99999996 667799999999999999999999 67889999999999999999999999999999654433 33344
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
...-+..|.|||.+..+.++.|||||||||+||||+| |+.||..... .+.+. ....+.+.
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-----~ev~~--------------~le~GyRl 423 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-----EEVLE--------------LLERGYRL 423 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-----HHHHH--------------HHhccCcC
Confidence 4456889999999999999999999999999999999 8888876432 22111 12234456
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
+.|..|+..+.++|..||+.+|++|||++.+...++++...
T Consensus 424 p~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 424 PRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 77788999999999999999999999999988888877654
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-45 Score=357.64 Aligned_cols=201 Identities=30% Similarity=0.497 Sum_probs=180.4
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeecc--chhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQ--LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
...+|...+.||+|+||+||+|++. ++..||||.+... ..+..+.+..|+.+++.++|||||++++++..++..++|
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 3468888889999999999999964 6899999999766 345567789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC------CcEEEeeeccce
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN------MTAHVSDFGISK 563 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~------~~~kl~Dfgla~ 563 (704)
||||.+|+|.+|+++.+. +++.....++.|+|.|+++| |+++||||||||+|||++.. -.+||+|||+|+
T Consensus 88 MEyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L---~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFL---HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EEeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHH---HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 999999999999998764 89999999999999999999 56889999999999999864 458999999999
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcc
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEI 620 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~ 620 (704)
.+..+. .....+|++-|||||++..++|+.|+|+||.|+++|+|++|+.||+..
T Consensus 164 ~L~~~~---~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 164 FLQPGS---MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hCCchh---HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 986432 344568999999999999999999999999999999999999999863
No 7
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-45 Score=357.92 Aligned_cols=253 Identities=27% Similarity=0.352 Sum_probs=204.8
Q ss_pred HhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchh-------hhHHHHHHHHHHHhcCCCCCceEEeeeeeCC
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLER-------ASRSFDSECEILRSIRHRNLIKIISNCCNID 484 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-------~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 484 (704)
..+.|.+.+.+|+|+||.|-+|. ..+|+.||||+++++... ......+|+++|++++|||||++.+++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 34567788999999999999997 458999999999765421 1223579999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC---CcEEEeeecc
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN---MTAHVSDFGI 561 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~---~~~kl~Dfgl 561 (704)
..|+||||++||+|.+++-.++. +.+..-..++.|++.|+.|| |++||+||||||+|||+..+ ..+||+|||+
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYL---H~~GI~HRDiKPeNILl~~~~e~~llKItDFGl 325 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYL---HSQGIIHRDIKPENILLSNDAEDCLLKITDFGL 325 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHH---HHcCcccccCCcceEEeccCCcceEEEecccch
Confidence 99999999999999999987654 66777788999999999999 67999999999999999755 7799999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCC---CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGI---ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
|+..+.. ..+...+|||.|.|||++.++. +..++|+||+||++|-+++|.+||.+.... .++.+.+.
T Consensus 326 AK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~-~sl~eQI~------ 395 (475)
T KOG0615|consen 326 AKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD-PSLKEQIL------ 395 (475)
T ss_pred hhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC-ccHHHHHh------
Confidence 9987643 3456679999999999987654 334789999999999999999999874332 22222111
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+.. ....+...+.+..++|.+|+..||++||++.|+++
T Consensus 396 -----~G~y~f---~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 396 -----KGRYAF---GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred -----cCcccc---cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 111111 11234456778899999999999999999999965
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=8.6e-46 Score=393.74 Aligned_cols=259 Identities=30% Similarity=0.497 Sum_probs=222.5
Q ss_pred CCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
.+....+.||+|+||+||+|+.. +...||||.++...+. ...+|++|++.++.++|||||+++|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 34455678999999999999843 3567999999877655 7789999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC-------------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 488 LVLEFMPNGSLEKWLYSH-------------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
+|+|||..|||.+||..+ +..++..+.+.||.|||.||+||. ++.+|||||.++|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccceEE
Confidence 999999999999999832 123788999999999999999995 4559999999999999999999
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHh
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 633 (704)
||+|||+++.+...+++.......-+.+|||||.+..+++|.++|||||||+|||+++ |+.||.+..+.+.- +
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI--e---- 716 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI--E---- 716 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH--H----
Confidence 9999999998877766665556667899999999999999999999999999999999 99999885443210 1
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
....+...+.++.|+.+++.||..||+..|++||+++||-..|+++.+.
T Consensus 717 -------------~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 717 -------------CIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred -------------HHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 1122334567789999999999999999999999999999999987543
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.8e-45 Score=371.86 Aligned_cols=247 Identities=24% Similarity=0.339 Sum_probs=210.8
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.+|...+.||+|||+.+|+++. .+|+.||+|++.+.. ....+.+.+||++.+.|+|||||+++++|++...+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5789999999999999999996 789999999997643 445678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|+|++|+|.++++ .+..+++..+..+++||+.|+.|| |+.+|+|||||..|++++++.++||+|||+|..+.....
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYL---H~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E 173 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYL---HSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE 173 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHH---HhcCceecccchhheeecCcCcEEecccceeeeecCccc
Confidence 9999999999988 555699999999999999999999 567899999999999999999999999999998864432
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....+|||-|+|||++.....+..+||||+||+||-|++|++||+...-. ..+... .
T Consensus 174 --rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk-ety~~I-------------------k 231 (592)
T KOG0575|consen 174 --RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK-ETYNKI-------------------K 231 (592)
T ss_pred --ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH-HHHHHH-------------------H
Confidence 234568999999999999999999999999999999999999999862110 011110 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
......|...+.+..++|.++++.+|.+|||+++|+.
T Consensus 232 ~~~Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 232 LNEYSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred hcCcccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 1112233455677889999999999999999999953
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-45 Score=339.60 Aligned_cols=255 Identities=24% Similarity=0.351 Sum_probs=206.6
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEee-eeeCC-eEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISN-CCNID-FKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~-~~~lv 489 (704)
.+|.+.++||+|.||+||++. ..+|..+|.|.+.... .........|+.++++++|||||+++++ +.+.. ..++|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 467888999999999999998 6789999999987543 3445678899999999999999999983 44444 48899
Q ss_pred EeccCCCCHHHHHh---hCCCccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 490 LEFMPNGSLEKWLY---SHNYFLGILERLNIMIDVGLALEYLHHGHST-PMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 490 ~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~-~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
|||+.+|+|.+.++ +.++.+++..+|+++.|++.||.++|..-.+ -|+||||||.||+++.+|.+|++|||+++.+
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999999987 4567799999999999999999999763322 2899999999999999999999999999988
Q ss_pred CCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
... .......+|||.||+||.+.+..|++|+||||+||++|||+.-+.||.+. .+.+..+....-..
T Consensus 179 ~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~qgd~------ 245 (375)
T KOG0591|consen 179 SSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQGDY------ 245 (375)
T ss_pred cch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHcCCC------
Confidence 543 23345568999999999999999999999999999999999999999873 33333222111111
Q ss_pred cchhhhhhhhhh-HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 646 NLVREEQAFSVK-IDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 646 ~~~~~~~~~~~~-~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.+.+ ..++..+.+++..|+.+||+.||+.-.+++.+.
T Consensus 246 --------~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 246 --------PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred --------CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 1122 466788999999999999999998655544443
No 11
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-45 Score=381.91 Aligned_cols=269 Identities=26% Similarity=0.468 Sum_probs=227.2
Q ss_pred ccchHHHHHHhCCC---------CccccccccCceEEEEEEEC----CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC
Q 005278 404 RTSYLDIQRATNGF---------NECNLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQL-ERASRSFDSECEILRSIR 469 (704)
Q Consensus 404 ~~~~~~~~~~~~~~---------~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~ 469 (704)
.++|+|.-++...| .+.++||.|.||.||+|+++ ....||||.++... ++...+|..|+.+|.++.
T Consensus 609 P~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd 688 (996)
T KOG0196|consen 609 PHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD 688 (996)
T ss_pred CccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC
Confidence 45666665555444 45689999999999999865 24679999998654 556778999999999999
Q ss_pred CCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 005278 470 HRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD 549 (704)
Q Consensus 470 h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~ 549 (704)
||||+++.|+.......++|+|||++|+|+.||+.+..++.+.+...++++||.|++|| .++++|||||.++|||++
T Consensus 689 HPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYL---sdm~YVHRDLAARNILVN 765 (996)
T KOG0196|consen 689 HPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYL---SDMNYVHRDLAARNILVN 765 (996)
T ss_pred CCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHH---hhcCchhhhhhhhheeec
Confidence 99999999999999999999999999999999999888899999999999999999999 678999999999999999
Q ss_pred CCCcEEEeeeccceecCCCCCcc-eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 550 ENMTAHVSDFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 550 ~~~~~kl~Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
.+-.+|++|||+++.+.+..... ....-.-+.+|.|||.+...++|.++|||||||+|||.++ |..||=+..+.+.
T Consensus 766 snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV-- 843 (996)
T KOG0196|consen 766 SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-- 843 (996)
T ss_pred cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH--
Confidence 99999999999999886544222 1122233689999999999999999999999999999988 8899855332211
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
++ -..++.+.+.+.+|+..+.+||..||++|-.+||.+.||+.+|+++.+
T Consensus 844 ---Ik--------------aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 844 ---IK--------------AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR 893 (996)
T ss_pred ---HH--------------HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence 11 122345677888999999999999999999999999999999999754
No 12
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=360.71 Aligned_cols=270 Identities=23% Similarity=0.395 Sum_probs=217.8
Q ss_pred HHHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 410 IQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 410 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
..+..+.+...+.||+|.||+||+|+|. ..||||++.... ....+.|+.|+.++++-+|.||+-++|||..+.. .
T Consensus 387 WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-A 463 (678)
T KOG0193|consen 387 WEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-A 463 (678)
T ss_pred cccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-e
Confidence 3344456677889999999999999986 369999997654 3355789999999999999999999999999887 9
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+|+.||+|.+|+.+++..+..++..+.+.|++|||+|+.|| |.++|||||+|..||++.+++.|||+|||++..-..
T Consensus 464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YL---HAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYL---HAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhh---hhhhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 99999999999999998778899999999999999999999 779999999999999999999999999999976543
Q ss_pred CCCcceeccccccccccCCcccCC---CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSE---GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
-..........|...|||||++.. .+|++++||||||+|+|||+||..||.. ...+. +--++-
T Consensus 541 w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dq-------------IifmVG 606 (678)
T KOG0193|consen 541 WSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQ-------------IIFMVG 606 (678)
T ss_pred eccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhh-------------eEEEec
Confidence 222222233457888999998764 4699999999999999999999999973 22111 111111
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhhhh
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDV 700 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~ 700 (704)
.++.. ........+|++++.+|+..||..+|++||.+.+|+.+|+++..+..+..
T Consensus 607 rG~l~-pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~ 661 (678)
T KOG0193|consen 607 RGYLM-PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKIN 661 (678)
T ss_pred ccccC-ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccccc
Confidence 11111 11223345778899999999999999999999999999999877654433
No 13
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-42 Score=346.80 Aligned_cols=267 Identities=25% Similarity=0.309 Sum_probs=212.8
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 488 (704)
.+.|+.+++||+|.||.||+|+ ..+|+.||+|+++... .....-..+||.+|+++.||||+++.+...+. ...||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3567778899999999999998 5689999999998765 33445678999999999999999999999876 68999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|+|||++ ||..++......++..++..++.|++.||+|+ |.++|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~c---H~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYC---HSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHH---hhcCeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999988 99999998888899999999999999999999 6799999999999999999999999999999988654
Q ss_pred CCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCcccccc-----------ccHHHHHHhhcC
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGE-----------MSLKHWVKESLP 636 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~-----------~~~~~~~~~~~~ 636 (704)
.. ...+..+.|..|.|||++.+. .|+.++|+||.|||+.||++|++.|++..+-+ .+...|....+|
T Consensus 272 ~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP 350 (560)
T KOG0600|consen 272 GS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLP 350 (560)
T ss_pred CC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCC
Confidence 33 235667899999999988764 69999999999999999999999998732211 122223222222
Q ss_pred CCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 637 DGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. ...+.+.-.............+...++++..+|..||++|.||.++++
T Consensus 351 ~--~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 351 H--ATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred c--ccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 111111111111111223455677889999999999999999999854
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=324.87 Aligned_cols=265 Identities=21% Similarity=0.242 Sum_probs=206.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
+.|+...++|+|+||+|||++.+ +|+.||||++.... ....+-..+|++++++++|+|+|.++++|......++|+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 46888899999999999999965 69999999996543 2334567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++. ++.+-+.+.....+...+.++++|++.|+.|+ |+.++|||||||+|||++.+|.+|+||||+|+.+.....
T Consensus 82 ~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~c---Hk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd- 156 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFC---HKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD- 156 (396)
T ss_pred ecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhh---hhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcc-
Confidence 9988 55555666666689999999999999999999 667899999999999999999999999999999864222
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc---CCCcchhcc---
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL---PDGLTEVVD--- 644 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--- 644 (704)
..+..+.|.+|.|||.+.+ ..|+..+||||.||++.||++|.+-|.+. ++.+...-+...+ ......++.
T Consensus 157 -~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--SDiDQLy~I~ktLG~L~prhq~iF~~N~ 233 (396)
T KOG0593|consen 157 -NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGR--SDIDQLYLIRKTLGNLIPRHQSIFSSNP 233 (396)
T ss_pred -hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCc--chHHHHHHHHHHHcccCHHHHHHhccCC
Confidence 2345578999999998876 78999999999999999999999987662 2222222222111 111111211
Q ss_pred -------ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 -------ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 -------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
|......+........+.-+.+++..|++.||++|++-+|++.
T Consensus 234 ~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 234 FFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 1111111112222344556889999999999999999999864
No 15
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=337.78 Aligned_cols=244 Identities=28% Similarity=0.309 Sum_probs=202.7
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
..++|+..++||+|+||+||.++. ++++.+|+|+++++. ..+.+....|..++.+++||.||+++-.|++.+..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 356899999999999999999985 468999999998764 2345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|+||+.||.|.-+|++++. +++..+.-++..|+.||.|| |+++|||||+||+|||+|++|+++|+|||+++.....
T Consensus 103 Vld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~L---H~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~ 178 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYL---HSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD 178 (357)
T ss_pred EEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHH---HhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC
Confidence 9999999999999997765 77887778889999999999 6789999999999999999999999999999864332
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
. ..+...+||+.|||||++.+..++..+|-||+|+++|||++|.+||.... ...+.+......
T Consensus 179 ~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k---------- 241 (357)
T KOG0598|consen 179 G--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGK---------- 241 (357)
T ss_pred C--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCc----------
Confidence 2 23445799999999999999999999999999999999999999997632 222222221111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVS 681 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 681 (704)
....+...+.+..+++...+..||++|..
T Consensus 242 ----~~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 242 ----LPLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ----CCCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 01111123456788999999999999963
No 16
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=384.08 Aligned_cols=264 Identities=29% Similarity=0.462 Sum_probs=223.5
Q ss_pred CCCCccccccccCceEEEEEEECC--CC----EEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD--GT----NVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~--~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
..-+....||+|+||.||.|...+ |. .||||.+++.. .+...+|.+|..+|++++|||||+++|++.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 344556789999999999998653 43 48999887654 456778999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhC------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 488 LVLEFMPNGSLEKWLYSH------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
+++|||++|+|..||++. ...+...+.+.++.|||+|++|| +++.+|||||.++|+|+++...|||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YL---e~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYL---ESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHH---HhCCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999976 67789999999999999999999 556799999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcc
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLT 640 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (704)
|+.+.+.+.+.......-+..|||||.+..+.++.|+|||||||++||++| |..||.+..+.+. +..|
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~~---------- 917 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLDV---------- 917 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHHH----------
Confidence 997766655554444455789999999999999999999999999999999 8889977432211 1111
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhhhh
Q 005278 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDV 700 (704)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~ 700 (704)
..+.+.+.+..|+..++++|..||+.+|++||++..+++.+.++...+....
T Consensus 918 --------~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~~ 969 (1025)
T KOG1095|consen 918 --------LEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGTI 969 (1025)
T ss_pred --------HhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccCc
Confidence 1122566778999999999999999999999999999999999887766543
No 17
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=334.49 Aligned_cols=261 Identities=24% Similarity=0.290 Sum_probs=212.0
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.++|+..+.||.|..++||+|+ ...++.||||++...... +-+.+.+|+..|+.++||||++++..|..+...++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4689999999999999999998 567899999999876533 34789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 492 FMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||.+|++.+.++.. ...+++..+..|++++++||.|| |++|.||||||+.|||++.+|.|||+|||.+..+.+...
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL---H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~ 181 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL---HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGD 181 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH---HhcCceecccccccEEEcCCCcEEEcCceeeeeecccCc
Confidence 99999999999853 44589999999999999999999 568999999999999999999999999998876654432
Q ss_pred cc-ee-ccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 571 SV-IQ-TMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 571 ~~-~~-~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
.. .. ....||+.|||||++.. ..|+.|+||||||++..|+.+|..||....+.++-+... ....|.-.....+
T Consensus 182 R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn~pp~~~t~~~~-- 258 (516)
T KOG0582|consen 182 RQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QNDPPTLLTSGLD-- 258 (516)
T ss_pred eeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCCCCcccccCC--
Confidence 22 11 44589999999999543 459999999999999999999999998865544433322 1111110111111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
......+...+.+++..|+++||++|||++++++
T Consensus 259 -------~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 259 -------KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -------hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 1223345668899999999999999999999964
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.2e-42 Score=338.79 Aligned_cols=256 Identities=28% Similarity=0.385 Sum_probs=204.3
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC--eEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNID--FKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 491 (704)
.+|...+.||+|+||+||++... +|+..|||..........+.+++|++++++++|||||+++|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 35677789999999999999854 59999999987653333567899999999999999999999854444 6889999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeeccceecCC-CC
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLLGE-GD 569 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfgla~~~~~-~~ 569 (704)
|+++|+|.+++...+..+++..+..+.+||++||+|| |+++||||||||+|||++. ++.+||+|||++..... ..
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~yl---Hs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~ 173 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYL---HSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGT 173 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccCcccceEEEeCCCCeEEeccCccccccccccc
Confidence 9999999999998765799999999999999999999 6789999999999999999 79999999999987653 11
Q ss_pred CcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.........||+.|||||++..+ ...+++||||+||++.||+||+.||... . ....+.-......
T Consensus 174 ~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-~---~~~~~~~~ig~~~---------- 239 (313)
T KOG0198|consen 174 KSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-F---EEAEALLLIGRED---------- 239 (313)
T ss_pred cccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-c---chHHHHHHHhccC----------
Confidence 12223346799999999999854 3445999999999999999999999874 1 1111111110000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.....+...+.+..+++.+|++.+|++||||.++++.--
T Consensus 240 ---~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 240 ---SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred ---CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 011233345677889999999999999999999977643
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-43 Score=347.00 Aligned_cols=266 Identities=23% Similarity=0.293 Sum_probs=207.7
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhh-HHHHHHHHHHHhcC-CCCCceEEeeeeeCC-eEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERAS-RSFDSECEILRSIR-HRNLIKIISNCCNID-FKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~lv 489 (704)
.++|...++||.|.||.||+|+ ..+|..||||+++.+..... ..-.+|+..+++++ ||||+++.+++.+.+ ..++|
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fV 88 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFV 88 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeee
Confidence 4678889999999999999998 45799999999976653333 23468999999998 999999999999988 99999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
||||+. +|.+.++.+++.+++..+..|+.||.+||+|+ |+.|+.|||+||+|||+.....+||+|||+|+.+....
T Consensus 89 fE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hi---Hk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp 164 (538)
T KOG0661|consen 89 FEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHI---HKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP 164 (538)
T ss_pred HHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHH---HhcCcccccCChhheEecccceeEecccccccccccCC
Confidence 999976 99999998899999999999999999999999 66899999999999999999999999999999875433
Q ss_pred CcceeccccccccccCCccc-CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh-------cCCC--c
Q 005278 570 DSVIQTMTIATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES-------LPDG--L 639 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-------~~~~--~ 639 (704)
..+..+.|..|+|||++ ..+.|+.+.|||++|||++|+.+-++-|.+..+-+. +-+.+.-. .+.+ +
T Consensus 165 ---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i~KIc~VLGtP~~~~~~eg~~L 240 (538)
T KOG0661|consen 165 ---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-IYKICEVLGTPDKDSWPEGYNL 240 (538)
T ss_pred ---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-HHHHHHHhCCCccccchhHHHH
Confidence 23455789999999975 577899999999999999999999888876332211 11111100 0000 0
Q ss_pred chhcc---ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 640 TEVVD---ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 640 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+. +...+. +.......++.+..+++..|+++||.+||||.|+++.
T Consensus 241 a~~mnf~~P~~~~~-~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 241 ASAMNFRFPQVKPS-PLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHhccCCCcCCCC-ChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 00011 000000 0111122367889999999999999999999999764
No 20
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.9e-41 Score=309.46 Aligned_cols=264 Identities=24% Similarity=0.352 Sum_probs=208.0
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.+|...+++|+|.||.||+|+ ..+|+.||||+++..... -.....+|+..++.++|+||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 467788999999999999998 568999999999765322 24567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
||+. +|...++.....++..++..++.++.+|++|| |++.|+|||+||.|+|++++|.+||+|||+|+.++.....
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~---H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~ 157 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYC---HSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI 157 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHH---HhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence 9975 99999998888899999999999999999999 5688999999999999999999999999999998765443
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHH---Hhhc---CCCcch---
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV---KESL---PDGLTE--- 641 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~---~~~~---~~~~~~--- 641 (704)
.. ..+.|..|.|||.+.+ ..|+..+||||.||++.||+-|.+-|.+ +.++.+.. +..- ++.|.+
T Consensus 158 ~~--~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG----~sDidQL~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 158 QT--HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG----DSDIDQLSKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred cc--cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC----CchHHHHHHHHHHcCCCCcccCccccc
Confidence 32 2378999999998776 4699999999999999999998876655 22233322 1110 111111
Q ss_pred hccccchhhh---hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 642 VVDANLVREE---QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 642 ~~~~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+.|-...... ........++....+++..++..||.+|+++.|++++
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111100000 0111223456677999999999999999999999653
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.5e-41 Score=353.29 Aligned_cols=261 Identities=25% Similarity=0.426 Sum_probs=205.3
Q ss_pred HhCCCCccccccccCceEEEEEEE------CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCC
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNID 484 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 484 (704)
..++|...+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346889999999999999999974 235689999987543 23346789999999999 8999999999887644
Q ss_pred -eEEEEEeccCCCCHHHHHhhCC---------------------------------------------------------
Q 005278 485 -FKALVLEFMPNGSLEKWLYSHN--------------------------------------------------------- 506 (704)
Q Consensus 485 -~~~lv~e~~~~gsL~~~l~~~~--------------------------------------------------------- 506 (704)
..++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 5789999999999999997431
Q ss_pred ----CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccccccc
Q 005278 507 ----YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIG 582 (704)
Q Consensus 507 ----~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~ 582 (704)
..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.+.............+++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 23677888999999999999995 57899999999999999999999999999987643322222233456788
Q ss_pred ccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHH
Q 005278 583 YMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCL 661 (704)
Q Consensus 583 y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (704)
|+|||++.+..++.++|||||||++|||++ |..||.+....+ .+..... .+ . ....+..++
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~----~~-------~------~~~~~~~~~ 303 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLK----DG-------T------RMRAPENAT 303 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHh----cC-------C------CCCCCCCCC
Confidence 999999999999999999999999999997 999997632211 1111110 00 0 001122345
Q ss_pred HHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 662 LSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 662 ~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
..+.+++..||+.||++||++.|+++.|+++.+
T Consensus 304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 678899999999999999999999999998765
No 22
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-41 Score=344.54 Aligned_cols=249 Identities=23% Similarity=0.355 Sum_probs=210.4
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
..|..-.+||+|+.|.||.|+ ..+++.||||++.......++-+.+|+.+|+..+|+|||.+++.|...+..++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 466777899999999999997 5678999999998876666778899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++|+|.+.+.... +++.++..|++.+++||+|| |.++|+|||||.+|||++.+|.+||+|||++..+..... .
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fL---H~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--K 425 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFL---HARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--K 425 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHH---HhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--c
Confidence 9999999987655 89999999999999999999 678999999999999999999999999999987755432 3
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
.+..+|||.|||||++....|++|+||||||++++||+-|.+||-. +..+..... +.+ ...+.
T Consensus 426 R~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyL---------Ia~----ng~P~ 488 (550)
T KOG0578|consen 426 RSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYL---------IAT----NGTPK 488 (550)
T ss_pred cccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHH---------Hhh----cCCCC
Confidence 4456799999999999999999999999999999999999999853 111111100 000 00122
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...+..+.+++.+|++.||++||+|.|+++
T Consensus 489 lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 489 LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 3344456788999999999999999999999976
No 23
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=339.42 Aligned_cols=253 Identities=25% Similarity=0.380 Sum_probs=209.0
Q ss_pred HHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
+...++|.-.+.||+|+|++|++|+. .+++.+|||++.+.. +...+-+..|-.+|.+| .||.|++++-.|.+...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34456888889999999999999984 579999999987543 22334577899999999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.|+|+||+++|+|.+++++.+. +++....-++.+|..|++|| |+.|||||||||+|||+|++++++|+|||.|+.+
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleyl---H~~GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYL---HSNGIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeEcCCCcEEEeeccccccC
Confidence 9999999999999999998754 88888888999999999999 7799999999999999999999999999999988
Q ss_pred CCCCCc---------cee--ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh
Q 005278 566 GEGDDS---------VIQ--TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES 634 (704)
Q Consensus 566 ~~~~~~---------~~~--~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 634 (704)
.+.... ... ...+||..|.+||++..+..++.+|+|+|||++|+|+.|++||.+..+ -..
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-yli-------- 295 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-YLI-------- 295 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-HHH--------
Confidence 653221 111 346899999999999999999999999999999999999999976321 011
Q ss_pred cCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 635 LPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+..+++-. ...++++++.+.+|+.+.+..||++|+|..||.+
T Consensus 296 ----FqkI~~l~-------y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 296 ----FQKIQALD-------YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred ----HHHHHHhc-------ccCCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 11111111 1223355677889999999999999999988754
No 24
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=349.82 Aligned_cols=260 Identities=27% Similarity=0.418 Sum_probs=212.0
Q ss_pred CCCCccccccccCceEEEEEEECC--C--CE-EEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD--G--TN-VAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~--~--~~-vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 486 (704)
++-...++||+|+||.||+|++.. + .. ||||..+... .....+|.+|+++|++++|||||+++|++......
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl 236 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPL 236 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCcc
Confidence 344455899999999999998642 2 23 8999987522 45667899999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++|||+|.||+|.++|++.+..++..++..++.+.|.||+|| |+++++||||.++|+|++.++.+||+|||+++.-.
T Consensus 237 ~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL---h~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~ 313 (474)
T KOG0194|consen 237 MLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL---HSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS 313 (474)
T ss_pred EEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH---HHCCCcchhHhHHHheecCCCeEEeCccccccCCc
Confidence 999999999999999998877899999999999999999999 67889999999999999999999999999987543
Q ss_pred CCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
. .........-+..|+|||.+..+.+++++|||||||++||+++ |..||.+.... ....++.
T Consensus 314 ~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~------------- 376 (474)
T KOG0194|consen 314 Q--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIV------------- 376 (474)
T ss_pred c--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHH-------------
Confidence 1 1111112246789999999999999999999999999999999 88899874322 2222221
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhh
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFL 697 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 697 (704)
..+.....+...+..+..++.+||..+|++||+|.++.+.++.+.....
T Consensus 377 ---~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 377 ---KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred ---hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1111122233456778889999999999999999999999999876544
No 25
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-42 Score=342.80 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=206.6
Q ss_pred CccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCC
Q 005278 418 NECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 497 (704)
..++-+|.|+-|.||+|++. ++.||||+++. .-+.+|..|++|+||||+.+.|+|.....+++|||||..|-
T Consensus 127 sELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 44678999999999999975 78899998643 22458899999999999999999999999999999999999
Q ss_pred HHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccc
Q 005278 498 LEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577 (704)
Q Consensus 498 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 577 (704)
|...|+..+. +.......+..+||.|+.||| ...|||||||.-||||..+..+||+|||.++...+.. ..-.+
T Consensus 199 L~~VLka~~~-itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S---TkMSF 271 (904)
T KOG4721|consen 199 LYEVLKAGRP-ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKS---TKMSF 271 (904)
T ss_pred HHHHHhccCc-cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEeccccchHhhhhhh---hhhhh
Confidence 9999986654 677788899999999999995 4679999999999999999999999999999875432 23346
Q ss_pred cccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhh
Q 005278 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVK 657 (704)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (704)
+||..|||||++...+++.|+||||||||||||+||..||.+...... +..+-. ..-..+.+
T Consensus 272 aGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-------------IwGVGs-----NsL~LpvP 333 (904)
T KOG4721|consen 272 AGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-------------IWGVGS-----NSLHLPVP 333 (904)
T ss_pred hhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-------------EEeccC-----CcccccCc
Confidence 899999999999999999999999999999999999999976422110 000000 11124567
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhh
Q 005278 658 IDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFL 697 (704)
Q Consensus 658 ~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 697 (704)
..|++.+.-++.+||+..|..||++++++..|+-...+.+
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 7899999999999999999999999999999987655544
No 26
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-41 Score=330.34 Aligned_cols=277 Identities=24% Similarity=0.338 Sum_probs=207.8
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc--CCCCCceEEeeeeeCC----eEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIISNCCNID----FKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~~----~~~l 488 (704)
......++||+|.||.||||++. ++.||||++.. +....|.+|-++++.. +|+||++++++-.... .+.|
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 44556679999999999999976 59999999974 3566788888887765 8999999999886665 7889
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHh------cCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH------GHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~------~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
|+||.+.|+|.+||..+. ++|....+++..+++||+|||+ +|+++|+|||||++|||+.+|+++.|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999999876 7999999999999999999996 47889999999999999999999999999999
Q ss_pred eecCCCCCcceeccccccccccCCcccCCCC-CC-----cccceeeHHHHHHHHhhCCCCCC--ccccccccHHHHHHhh
Q 005278 563 KLLGEGDDSVIQTMTIATIGYMAPEYGSEGI-IS-----PKSDVYSYGILLMETFTRKKPTN--EIFIGEMSLKHWVKES 634 (704)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-----~~~Dv~s~Gv~l~el~tg~~p~~--~~~~~~~~~~~~~~~~ 634 (704)
..+..+.........+||.+|||||++.+.. +. .+.||||+|.|+|||+++...++ ...+=...+..-+...
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 9987766655566689999999999987653 22 36899999999999999764432 1111011111111100
Q ss_pred cCC-Ccchh-ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhh
Q 005278 635 LPD-GLTEV-VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFL 697 (704)
Q Consensus 635 ~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 697 (704)
..- ...+. +....+...+........+..+.+.+..||..||+.|.|+.=|-+.+.++.....
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 000 01111 1111111111111222335668889999999999999999999998888765543
No 27
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-40 Score=341.16 Aligned_cols=249 Identities=25% Similarity=0.354 Sum_probs=205.2
Q ss_pred HHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc----h-hhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCC
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL----E-RASRSFDSECEILRSIR-HRNLIKIISNCCNID 484 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~----~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 484 (704)
...++|...+.||+|+||+|+.|.. .+++.||+|++.... . ...+.+.+|+.+++.++ ||||+++++++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 3456899999999999999999974 578999999776531 1 23456778999999999 999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeeccce
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGISK 563 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla~ 563 (704)
..++||||+.+|+|.+++.. ...+.+.....+++|++.|++|+ |+++|+||||||+|++++.+ +++||+|||++.
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~---H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~ 169 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYC---HSRGIVHRDLKPENILLDGNEGNLKLSDFGLSA 169 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEecCCCCCEEEecccccc
Confidence 99999999999999999998 55588899999999999999999 67899999999999999999 999999999999
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCC-CC-cccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcch
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGI-IS-PKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTE 641 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (704)
... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++.. .....+...
T Consensus 170 ~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----~~~l~~ki~------ 236 (370)
T KOG0583|consen 170 ISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----VPNLYRKIR------ 236 (370)
T ss_pred ccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----HHHHHHHHh------
Confidence 874 1222345568999999999999876 65 78999999999999999999998721 111111100
Q ss_pred hccccchhhhhhhhhhHHH-HHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 642 VVDANLVREEQAFSVKIDC-LLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
......+..+ +.++..++.+|+..+|.+|+++.||.
T Consensus 237 ---------~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 237 ---------KGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred ---------cCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 0111222233 66788999999999999999999997
No 28
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=332.11 Aligned_cols=248 Identities=23% Similarity=0.319 Sum_probs=200.4
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccchhh---hHHHHHHHHHHHhcCCCCCceEEeeeee----CCeEEEEEec
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA---SRSFDSECEILRSIRHRNLIKIISNCCN----IDFKALVLEF 492 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~---~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~ 492 (704)
...||+|++|.||+|.. +|+.||||+++...... .+.+.+|+.++++++||||++++|++.+ ....++||||
T Consensus 25 ~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred CeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 46899999999999987 68999999987543222 4678899999999999999999999876 3467899999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+++.... .+++.....++.+++.|++|||. ..+++||||||+||++++++.+||+|||+++.+....
T Consensus 104 ~~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 104 CTRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 99999999998654 48899999999999999999964 2367899999999999999999999999998654321
Q ss_pred eeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 573 IQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ..+........
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~-----~~~~~~i~~~~------------ 238 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT-----KEIYDLIINKN------------ 238 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcC------------
Confidence 23457899999999876 6789999999999999999999999976421 11111110000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
.....+..++..+.+++.+||+.||++||+++|+++.|+.++.
T Consensus 239 -~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 239 -NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred -CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 0111122456778999999999999999999999999998764
No 29
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.7e-40 Score=333.95 Aligned_cols=246 Identities=29% Similarity=0.419 Sum_probs=207.6
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|-+.+.||+|.||.||||+. .+.+.||+|.+.+.. +++.+.+.+|+++++.++||||+.++++|+...+.++|+|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 5678888999999999999985 468999999997654 3445678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+.+ +|..++...+. +++..+..++.++..||.|| |+.+|.|||+||+||+++..+++|+||||+|+.+.. ..
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yL---hs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~--~t 154 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYL---HSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMST--NT 154 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHH---HhcCcccccCCcceeeecCCCceeechhhhhhhccc--Cc
Confidence 9977 99999986544 89999999999999999999 678899999999999999999999999999998765 33
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
...+...|||-|||||+..++.|+..+|+||+||++||+++|++||... +..+.++....+.
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~------------- 216 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDP------------- 216 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCC-------------
Confidence 4455668999999999999999999999999999999999999999652 1222222221111
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...+..+..++...+.+||.+|.+..+++.
T Consensus 217 --v~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 217 --VKPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred --CCCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 1112244667888999999999999999999865
No 30
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=335.06 Aligned_cols=263 Identities=27% Similarity=0.417 Sum_probs=221.2
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
......++||+|-||.|..++...+..||||+++..... ...+|.+|+++|.+++||||++++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 445667899999999999999988899999999877644 4478999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCc-cCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+|+.++... .......+|+.|||.|++|| .+.++||||+.++|+|+|.++++||+|||+++.+..++...
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYL---es~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYL---ESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHH---HhhchhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999999999977433 36677788999999999999 67889999999999999999999999999999888888777
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh--CCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT--RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....+-+.+|||||.+.-++++.++|||+||+++||+++ ...||....++.. ++ ...++.+.. ..
T Consensus 695 vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v-----ve-----n~~~~~~~~--~~ 762 (807)
T KOG1094|consen 695 VQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV-----VE-----NAGEFFRDQ--GR 762 (807)
T ss_pred eecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH-----HH-----hhhhhcCCC--Cc
Confidence 7777788999999999999999999999999999999876 7789877543211 11 111111110 11
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
......+.-|+.++.+++..||+.+-++||+++++...|.+.
T Consensus 763 ~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 763 QVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 122445667889999999999999999999999998887653
No 31
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=317.89 Aligned_cols=271 Identities=25% Similarity=0.397 Sum_probs=216.7
Q ss_pred HHHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc--CCCCCceEEeeeeeC----
Q 005278 410 IQRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI--RHRNLIKIISNCCNI---- 483 (704)
Q Consensus 410 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~---- 483 (704)
.+....+....+.||+|.||+||+|.|. |+.||||++.. .+++.+.+|.++++.+ +|+||+.+++.=..+
T Consensus 206 QRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~ 281 (513)
T KOG2052|consen 206 QRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSW 281 (513)
T ss_pred HHhhhheeEEEEEecCccccceeecccc-CCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCce
Confidence 3445567788899999999999999986 89999999964 3556777888888875 999999999864332
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHh-----cCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHH-----GHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~-----~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
...+||++|+++|||.|||.+.. ++....++++..+|.||++||. +.++.|.|||||+.|||+..++.+.|+|
T Consensus 282 TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 282 TQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 25789999999999999998743 7889999999999999999994 4678899999999999999999999999
Q ss_pred eccceecCCCCC--cceeccccccccccCCcccCCCC----CC--cccceeeHHHHHHHHhhC----------CCCCCcc
Q 005278 559 FGISKLLGEGDD--SVIQTMTIATIGYMAPEYGSEGI----IS--PKSDVYSYGILLMETFTR----------KKPTNEI 620 (704)
Q Consensus 559 fgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~----~~--~~~Dv~s~Gv~l~el~tg----------~~p~~~~ 620 (704)
+|+|-......+ .......+||.+|||||++.... +. ..+||||||.|+||+..+ +.||.+.
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 999987755422 33445668999999999976542 11 258999999999998864 3688888
Q ss_pred ccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 621 FIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
.+.+.++.+..+-...+.+...+. .......+...+.++|+.||..+|..|.|+-.+.+.|.++.+
T Consensus 440 Vp~DPs~eeMrkVVCv~~~RP~ip--------nrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 440 VPSDPSFEEMRKVVCVQKLRPNIP--------NRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCHHHHhcceeecccCCCCC--------cccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 888887777644333332222222 222333567789999999999999999999999999998864
No 32
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.8e-39 Score=343.78 Aligned_cols=258 Identities=23% Similarity=0.350 Sum_probs=204.3
Q ss_pred hCCCCccccccccCceEEEEEEE------CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
.++|+..+.||+|+||.||+|+. .++..||||+++... ....+.+.+|+++++.+ +||||+++++++.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45788899999999999999973 235689999986443 23445788999999999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005278 486 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 506 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 506 (704)
.++||||+++|+|.+++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999986422
Q ss_pred ---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 507 ---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 507 ---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 14678889999999999999995 578999999999999999999999999999876543322
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.......++..|+|||++.+..++.++|||||||++|||++ |..||...... ....++.......
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~------------- 336 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRM------------- 336 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccC-------------
Confidence 22223345678999999999999999999999999999998 88888663221 1122222111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+...+.++.+++..||+.||++||++.||++.|++.
T Consensus 337 ----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 ----LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred ----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 01112245688999999999999999999999999863
No 33
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.9e-39 Score=343.19 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=204.4
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
.++|+..+.||+|+||.||+|+.. ++..||+|+++... ......+.+|+++++.+ +|+||+++++++...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357888999999999999998742 24579999987543 23345688999999999 89999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005278 486 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 506 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 506 (704)
.++||||+++|+|.+++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999986321
Q ss_pred ----------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 507 ----------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 507 ----------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
..+++..+.+++.|++.|++|| |+.+|+||||||+||++++++.+||+|||+++.+...........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFL---ASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHH---HHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 2367888999999999999999 557899999999999999999999999999987644322222223
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
..+++.|+|||++.+..++.++|||||||++|||++ |+.||....... ........... ..
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~-----------------~~ 335 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQ-----------------MS 335 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccC-----------------cc
Confidence 345678999999988899999999999999999997 999997643221 11111110000 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.+...+.++.+++..||+.||++||++.||++.|+++.
T Consensus 336 ~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 336 RPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 01122467889999999999999999999999998863
No 34
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=3.3e-39 Score=333.11 Aligned_cols=261 Identities=28% Similarity=0.414 Sum_probs=202.5
Q ss_pred CCCCccccccccCceEEEEEEECC-----------------CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-----------------GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKI 476 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 476 (704)
++|...+.||+|+||.||+|...+ +..||+|.+.... ......+.+|++++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578888999999999999997532 3469999987543 2334578999999999999999999
Q ss_pred EeeeeeCCeEEEEEeccCCCCHHHHHhhCC------------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEe
Q 005278 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHN------------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVH 538 (704)
Q Consensus 477 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH 538 (704)
++++.+.+..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCccc
Confidence 999999999999999999999999986421 24678889999999999999995 578999
Q ss_pred cCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh--CCCC
Q 005278 539 CDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT--RKKP 616 (704)
Q Consensus 539 ~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t--g~~p 616 (704)
|||||+||+++.++.+||+|||+++.+.............++..|+|||++.++.++.++||||||+++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999987644333222333456889999999988889999999999999999987 5567
Q ss_pred CCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 617 TNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
|...... .....+........... ....+..++..+.+++.+||+.+|++||++.||.+.|+
T Consensus 242 ~~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTDE--QVIENAGEFFRDQGRQV----------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCHH--HHHHHHHHHhhhccccc----------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 7653221 11111111111100000 00111234567899999999999999999999998876
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=328.81 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=199.6
Q ss_pred HHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
...++|+.+.+||+|+||.||.|+. .+|..+|+|++++.. ....+.+..|-.+|....+|.||+++-.|.+.+..|
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LY 217 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLY 217 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeE
Confidence 3568999999999999999999985 469999999998764 334567889999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
|||||++||++..+|...+. +++..+.-++.+++.|++-+ |+.|+|||||||+|+|||..|++||+|||++.-+..
T Consensus 218 LiMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~i---H~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 218 LIMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESI---HQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHH---HHcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 99999999999999986654 77778888888899999999 668999999999999999999999999999854321
Q ss_pred C----------------------CCc----ce-------------------eccccccccccCCcccCCCCCCcccceee
Q 005278 568 G----------------------DDS----VI-------------------QTMTIATIGYMAPEYGSEGIISPKSDVYS 602 (704)
Q Consensus 568 ~----------------------~~~----~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s 602 (704)
. ... .. .-..+|||-|||||++.+..|+..+|.||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0 000 00 01236999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCCcccccc--ccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC
Q 005278 603 YGILLMETFTRKKPTNEIFIGE--MSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRV 680 (704)
Q Consensus 603 ~Gv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp 680 (704)
+|||+|||+.|.+||.+....+ ..+..|.... ..+....++.+..++|.+|+. ||++|.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l------------------~fP~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRETL------------------KFPEEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhc------------------cCCCcCcccHHHHHHHHHHhc-CHHHhc
Confidence 9999999999999997733221 1122221111 112222345678899999999 999998
Q ss_pred C
Q 005278 681 S 681 (704)
Q Consensus 681 t 681 (704)
.
T Consensus 435 G 435 (550)
T KOG0605|consen 435 G 435 (550)
T ss_pred C
Confidence 6
No 36
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=326.95 Aligned_cols=248 Identities=26% Similarity=0.333 Sum_probs=206.4
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..|...+.||+|.||.||+|.. .+++.||+|++.... ..+.+.+++|+.++.+++++||.++++.+..+....++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4677778999999999999985 468999999998664 34557899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
|.+|++.+.++.... +++.....|++++..|+.|| |..+.+|||||+.||++..+|.+|++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~yl---H~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-- 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYL---HSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-- 166 (467)
T ss_pred hcCcchhhhhccCCC-CccceeeeehHHHHHHhhhh---hhcceecccccccceeEeccCcEEEEecceeeeeechhh--
Confidence 999999999976543 47777888999999999999 567899999999999999999999999999987754332
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....+|||.|||||++....|+.|+||||+|++.+||.+|.+|+........ ...+. +..
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv--lflIp-----------------k~~ 227 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV--LFLIP-----------------KSA 227 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE--EEecc-----------------CCC
Confidence 23556899999999999988999999999999999999999999987543111 00000 011
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
......++++.+.+++..|+++||+.||+|.++++
T Consensus 228 PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 228 PPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred CCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 11122266778899999999999999999999964
No 37
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-39 Score=330.27 Aligned_cols=257 Identities=25% Similarity=0.405 Sum_probs=220.0
Q ss_pred hCCCCccccccccCceEEEEEEEC---CC--CEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF---DG--TNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~---~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
.+.....++||+|-||.||+|.+- .| -.||||.-+.+. ....+.|.+|..+|++++||||++++|.|.+.. ..
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P-~W 466 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP-MW 466 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc-ee
Confidence 344455679999999999999853 23 358888877643 345678999999999999999999999998764 58
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+|||.++-|.|..|++.++..++......++.||+.||+|| ++..+|||||..+|||+.....+|++|||+++.+.+
T Consensus 467 ivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYL---eSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 467 IVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYL---ESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH---HhhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999999998899999999999999999999 678999999999999999999999999999999977
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
...... +...-+..|||||.+.-..++.++|||.|||++||++. |..||.+..+.+.- -
T Consensus 544 ~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI-----------------~-- 603 (974)
T KOG4257|consen 544 DAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI-----------------G-- 603 (974)
T ss_pred cchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE-----------------E--
Confidence 655433 34456889999999999999999999999999999998 99999886554321 1
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
-...+.+.+.+..|++.++.++.+||.++|.+||++.|+...|.++..
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 122344567788999999999999999999999999999999998865
No 38
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-40 Score=297.28 Aligned_cols=264 Identities=22% Similarity=0.270 Sum_probs=211.7
Q ss_pred HHhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----e
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNID-----F 485 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~ 485 (704)
...++|.+.+.+|+|||+-||.++ ..+++.+|+|++.-...++.+...+|++..++++|||+++++++...+. .
T Consensus 18 In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 18 INNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred EcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 445789999999999999999998 6789999999998776677788999999999999999999999875433 4
Q ss_pred EEEEEeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 486 KALVLEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
.|++++|...|+|.+.+.. .+..+++.+...++.++++||++||. -.++++||||||.||++.+++.+++.|||.+
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~-~~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHE-KEPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhc-cCCcccccCCCcceeEecCCCceEEEeccCc
Confidence 8999999999999999983 34578999999999999999999976 3456999999999999999999999999998
Q ss_pred eecCCCCCcc-------eeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH
Q 005278 563 KLLGEGDDSV-------IQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 563 ~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 632 (704)
+...-.-... .......|..|.|||.+. +...+.++|||||||++|+|+.|..||+.....+.++.-
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL--- 253 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL--- 253 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE---
Confidence 7653221110 112235799999999763 566889999999999999999999999875443322111
Q ss_pred hhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 633 ESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.+....+. .+....++..+.+++.+|++.||.+||++.+++..++.+
T Consensus 254 --------Av~n~q~s-----~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 --------AVQNAQIS-----IPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------eeeccccc-----cCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 11111111 111112577899999999999999999999999998865
No 39
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-40 Score=332.84 Aligned_cols=255 Identities=26% Similarity=0.391 Sum_probs=217.1
Q ss_pred CCCCccccccccCceEEEEEEECC-CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.+....++||-|.||.||.|.|+. .-.||||.++.+ ....++|..|..+|+.++|||+|+++|+|......|+|+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 355567899999999999999874 667999999765 345688999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
..|+|.+||++.. ...+....+.++.||+.|++|| .++.+|||||.++|+|+.++..+||+|||+++.+... .+.
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYL---EkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD-TYT 421 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD-TYT 421 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHH---HHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC-cee
Confidence 9999999999653 4467777888999999999999 6688999999999999999999999999999998543 333
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.+....-+..|.|||-+....++.|+|||+|||+|||+.| |..||.+.. +.+. ..+...+
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSqV--------------Y~LLEkg 482 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQV--------------YGLLEKG 482 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHHH--------------HHHHhcc
Confidence 4444556889999999999999999999999999999999 888987642 2221 1123334
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.+...++.|++.++++|+.||+++|++||+++|+-+.++.+-
T Consensus 483 yRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 483 YRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred ccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 455677899999999999999999999999999999998763
No 40
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.7e-38 Score=378.31 Aligned_cols=326 Identities=33% Similarity=0.510 Sum_probs=253.2
Q ss_pred CCCCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCC
Q 005278 3 YMLPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLT 82 (704)
Q Consensus 3 ~~l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~ 82 (704)
..+++|++|+|++|.+++.+|..|+++++|++|+|++|.+.+..|..|.++++|++|+|++|.+....+ ..+.
T Consensus 233 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p-------~~~~ 305 (968)
T PLN00113 233 GGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIP-------ELVI 305 (968)
T ss_pred hcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCC-------hhHc
Confidence 468899999999999999999999999999999999999999999999999999999999999876543 3377
Q ss_pred CCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCe
Q 005278 83 NCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQG 162 (704)
Q Consensus 83 ~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 162 (704)
++++|++|++++|.+.+..|..+..++ +|++|++++|.+.+.+|..++.+++|+.|++++|.+.+..|..+..+++|+.
T Consensus 306 ~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~ 384 (968)
T PLN00113 306 QLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFK 384 (968)
T ss_pred CCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCE
Confidence 788888888888888777777777664 5777888777777777777777777777777777776666666665555555
Q ss_pred eeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEec------------------------CccC
Q 005278 163 LYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLG------------------------SNKL 218 (704)
Q Consensus 163 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~------------------------~n~l 218 (704)
|++++|++.+.+|..+..+++|+.|++++|.+++..|..+..+++|+.|+++ +|.+
T Consensus 385 L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~ 464 (968)
T PLN00113 385 LILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKF 464 (968)
T ss_pred EECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCcee
Confidence 5555555555555555555555555555555555555445555555555554 4444
Q ss_pred CCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCccc
Q 005278 219 TSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSF 298 (704)
Q Consensus 219 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~ 298 (704)
.+..|..+ ..++|+.|++++|++.+..|..+.++++|+.|++++|++.+.+|..+..+++|+.|+|++|.+++.+|..+
T Consensus 465 ~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 543 (968)
T PLN00113 465 FGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASF 543 (968)
T ss_pred eeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhH
Confidence 44444433 23567777777888878888888889999999999999999999999999999999999999999999999
Q ss_pred ccccccceEEecccCCCCCCCCCcccccccCcccccCCC
Q 005278 299 GSLISLESLDLSRNNLSGEIPKNFSAQSFLSNYALCGPA 337 (704)
Q Consensus 299 ~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~l~g~~ 337 (704)
..+++|+.|++++|+++|.+|..+...+.+....+.+++
T Consensus 544 ~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~ 582 (968)
T PLN00113 544 SEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNH 582 (968)
T ss_pred hCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCc
Confidence 999999999999999999999888777767666666554
No 41
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.8e-39 Score=325.09 Aligned_cols=255 Identities=22% Similarity=0.335 Sum_probs=205.2
Q ss_pred CCCCccccccccCceEEEEEEEC----CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
++|+..+.||+|+||.||+|.+. .+..||+|.++.... ...+.+.+|+..+++++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46888899999999999999753 366899999876532 3345788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++......+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 9999999999999876667899999999999999999995 5789999999999999999999999999876542211
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
. .......++..|+|||++.+..++.++|||||||++||+++ |..||...... ...+.+.. .
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~----~---------- 224 (266)
T cd05064 162 I-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVED----G---------- 224 (266)
T ss_pred h-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC----C----------
Confidence 1 11112235678999999999999999999999999999775 99999763211 11111110 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
...+.+..++..+.+++..||+.+|++||++.|+.+.|+++
T Consensus 225 ---~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 225 ---FRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 00112234567788999999999999999999999998764
No 42
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-39 Score=300.59 Aligned_cols=237 Identities=24% Similarity=0.301 Sum_probs=200.1
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
.++|+....+|.|+||.|..++.+ +|..+|+|++.++. -+..+...+|..+++.+.||+++++++.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 357888899999999999999865 68999999998664 23456688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||++||.|.+++++.++ +++....-++.+|+.|++|| |+.+|++||+||+|||+|.+|.+||+|||.|+.+...
T Consensus 123 meyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleyl---H~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r- 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYL---HSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR- 197 (355)
T ss_pred EeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHH---HhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-
Confidence 999999999999987655 88888888999999999999 5678999999999999999999999999999986432
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
+...+|||.|+|||++.++.+..++|-|||||++|||+.|..||..... ...+.+.+. .
T Consensus 198 ----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~------------~---- 256 (355)
T KOG0616|consen 198 ----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILE------------G---- 256 (355)
T ss_pred ----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHh------------C----
Confidence 4456899999999999999999999999999999999999999976332 111111111 1
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCC
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQR 679 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 679 (704)
....|..+..++.+++...++.|-.+|
T Consensus 257 ---~v~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 ---KVKFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ---cccCCcccCHHHHHHHHHHHhhhhHhh
Confidence 122333556678889999999999888
No 43
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=7.4e-39 Score=327.16 Aligned_cols=256 Identities=28% Similarity=0.512 Sum_probs=207.6
Q ss_pred CCCCccccccccCceEEEEEEECC------CCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD------GTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
++|+..+.||+|+||.||+|.... ...||+|.+..... .....+.+|++.+++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 467888999999999999998543 25799999865432 33456899999999999999999999999988999
Q ss_pred EEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 005278 488 LVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM 552 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~ 552 (704)
++|||+++|+|.+++.... ..+++..++.++.|++.|++|| |+.+++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~l---H~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYL---SSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccccceEEEcCCC
Confidence 9999999999999997532 4478889999999999999999 457899999999999999999
Q ss_pred cEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHH
Q 005278 553 TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWV 631 (704)
Q Consensus 553 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~ 631 (704)
.++|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||.+.... .....+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~i 239 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEMI 239 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 999999999987644333333334467889999999988889999999999999999998 99998763321 111111
Q ss_pred HhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
... .....+..++.++.+++..||+.||.+||++.||++.|+++
T Consensus 240 ~~~-----------------~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 240 RSR-----------------QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HcC-----------------CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 110 00112335678899999999999999999999999999863
No 44
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-39 Score=305.71 Aligned_cols=267 Identities=22% Similarity=0.274 Sum_probs=203.5
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKA 487 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 487 (704)
..+.|+.++.|++|.||.||+|+. .+++.||+|+++...+. -.-...+||.++.+.+|||||.+-.++.. -+.+|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 446788999999999999999985 47899999999765432 22345789999999999999999988765 45799
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+|||||++ +|...+..-+..+...++..++.|++.|++|| |...|+|||+||+|+|+.+.|.+||+|||+|+.++.
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~l---H~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHL---HDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---hhceeEecccchhheeeccCCcEEecccchhhhhcC
Confidence 99999988 99999998777899999999999999999999 557799999999999999999999999999999876
Q ss_pred CCCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh------hcCCCcc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE------SLPDGLT 640 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~------~~~~~~~ 640 (704)
.. ...+..+.|..|.|||.+.+. .|+...|+||+|||+.|++++++-|.+..+-+ ++...+.. ....++.
T Consensus 230 p~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~d-Ql~~If~llGtPte~iwpg~~ 306 (419)
T KOG0663|consen 230 PL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEID-QLDKIFKLLGTPSEAIWPGYS 306 (419)
T ss_pred Cc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHH-HHHHHHHHhCCCccccCCCcc
Confidence 53 234566789999999987764 59999999999999999999998887632211 11111111 0111111
Q ss_pred hhccc---cchhhh-----hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 EVVDA---NLVREE-----QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 ~~~~~---~~~~~~-----~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..-.. .+.... ..+... .....-.+++...+.+||.+|.||.|.++
T Consensus 307 ~lp~~k~~~f~~~pyn~lr~kF~~~-~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 307 ELPAVKKMTFSEHPYNNLRKKFGAL-SLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccchhhccccCCCCchhhhhhcccc-ccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11100 000000 000000 13356678999999999999999999853
No 45
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=6.5e-39 Score=332.62 Aligned_cols=259 Identities=25% Similarity=0.451 Sum_probs=207.2
Q ss_pred CCCCccccccccCceEEEEEEEC-CCC----EEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGT----NVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.+|+..+.||+|+||.||+|++. +++ .||+|.+.... ......+.+|+.+++.++||||++++|++... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999853 344 38999986443 33456788999999999999999999998765 4679
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|+||+++|+|.+++......+++..++.++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.+...
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~ 162 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYL---EERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAD 162 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEecCCCcEEEccccccccccCC
Confidence 9999999999999997766789999999999999999999 5678999999999999999999999999999877543
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
..........++..|+|||++.+..++.++|||||||++|||++ |+.||++.... .+..+....
T Consensus 163 ~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~------------- 227 (316)
T cd05108 163 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG------------- 227 (316)
T ss_pred CcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCC-------------
Confidence 33222223345778999999999999999999999999999998 99998763211 111111110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHh
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 696 (704)
...+.+..++..+.+++..||+.+|++||++.+++..+.++.++.
T Consensus 228 ----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 228 ----ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred ----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 001111234556889999999999999999999999998886543
No 46
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=1.4e-39 Score=327.21 Aligned_cols=249 Identities=33% Similarity=0.541 Sum_probs=196.4
Q ss_pred ccccccccCceEEEEEEEC-----CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 419 ECNLLGTGSFGSVYKGTLF-----DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+.||+|.||.||+|.+. .+..|+||.++... ....+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3468999999999999976 36789999996543 33467899999999999999999999999988889999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..++.++.|++.||+|||. .+++|+||+++||++++++.+||+|||++.........
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~ 159 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKY 159 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSE
T ss_pred ccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999976 6679999999999999999999964 67999999999999999999999999999887433333
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
...........|+|||.+.+..++.++||||||+++||+++ |+.||..... ..+..... +
T Consensus 160 ~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~-----~~~~~~~~-~------------- 220 (259)
T PF07714_consen 160 KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN-----EEIIEKLK-Q------------- 220 (259)
T ss_dssp EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH-----HHHHHHHH-T-------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccc-----cccccccc-c-------------
Confidence 33344567889999999998889999999999999999999 6788866411 11111110 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
......+..++..+.+++..||+.+|++||++.|+++.|
T Consensus 221 ~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 221 GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred cccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 011122234567788999999999999999999999876
No 47
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.6e-38 Score=336.96 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=205.5
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 485 (704)
.++|.+.++||+|+||.||+|+.. .+..||||++.... ....+.+.+|+++++++. ||||+++++++.+.+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 468888999999999999999853 13469999986543 234467899999999996 9999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005278 486 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 506 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 506 (704)
.++||||+++|+|.+++....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999986421
Q ss_pred ------------------------------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC
Q 005278 507 ------------------------------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE 550 (704)
Q Consensus 507 ------------------------------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~ 550 (704)
..+++..+..++.|++.|++||| +.+|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEEeC
Confidence 23677888999999999999994 578999999999999999
Q ss_pred CCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHH
Q 005278 551 NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKH 629 (704)
Q Consensus 551 ~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~ 629 (704)
++.+||+|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |..||........ ...
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~~ 351 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FYN 351 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HHH
Confidence 99999999999987643322222233457788999999988899999999999999999997 9999875322111 111
Q ss_pred HHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 630 WVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.+. ... ....+..++..+.+++.+||+.+|++||++.+|.++|+++.
T Consensus 352 ~~~----~~~-------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 352 KIK----SGY-------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHh----cCC-------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111 000 01112244667889999999999999999999999998764
No 48
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.6e-38 Score=324.54 Aligned_cols=249 Identities=22% Similarity=0.286 Sum_probs=199.4
Q ss_pred CCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 417 FNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
|+..+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|++++++++|++|+++.+++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999985 579999999986543 12234578899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..+..++.|++.|++|| |+.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDL---QRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET- 157 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe-
Confidence 9999999888643 34589999999999999999999 567899999999999999999999999999987643221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ .... .......
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~~-~~~~~~~------------- 220 (285)
T cd05631 158 --VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REEV-DRRVKED------------- 220 (285)
T ss_pred --ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHHH-HHHhhcc-------------
Confidence 2334689999999999999999999999999999999999999976322110 1111 1000000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
....+...+..+.+++.+||+.||++||+ ++|+++
T Consensus 221 -~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 -QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred -cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00112234567889999999999999997 777765
No 49
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.2e-38 Score=320.54 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=207.6
Q ss_pred CCCCccccccccCceEEEEEEECC----CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD----GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
++|+..+.||+|+||+||+|.+.. ...||||.++... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 578889999999999999998642 4579999986543 33456788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++......+++..+..++.|++.|++|| |+.+|+||||||+||++++++.++++|||++.......
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L---h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL---SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 999999999999987666789999999999999999999 55789999999999999999999999999998775222
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.........++..|+|||...+..++.++||||||+++||+++ |..||...... ...+.+....
T Consensus 161 ~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~------------- 225 (266)
T cd05033 161 ATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY------------- 225 (266)
T ss_pred cceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC-------------
Confidence 2222222345678999999998899999999999999999998 99998653211 1111111100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+.+..++..+.+++..|++.+|++||++.||++.|+++
T Consensus 226 ----~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ----RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011123456788999999999999999999999999875
No 50
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-39 Score=293.73 Aligned_cols=248 Identities=23% Similarity=0.278 Sum_probs=209.0
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
+.++|++.+.+|+|.||.||.|+. +++--||+|++.+.. .....++.+|+++-+.++||||++++++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 346899999999999999999985 467889999986543 3456789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 489 VLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
++||.++|++...|... ...+++.....+..|+|.|+.|+ |.++|+||||||+|+|++.++..|++|||.+..-.
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~---h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYC---HLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHh---ccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 99999999999999843 34588889999999999999999 77899999999999999999999999999987643
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
.......+||..|.+||...+...+..+|+|++|+..||++.|.+||.... .+..+....+.
T Consensus 176 ---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~-------------- 237 (281)
T KOG0580|consen 176 ---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKV-------------- 237 (281)
T ss_pred ---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHc--------------
Confidence 223445689999999999999999999999999999999999999998744 22222222111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+...+....++|..|+..+|.+|.+..|++.
T Consensus 238 -----~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 238 -----DLKFPSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred -----cccCCcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 11122345667889999999999999999999865
No 51
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-39 Score=329.24 Aligned_cols=248 Identities=24% Similarity=0.343 Sum_probs=208.3
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
...|...+-||.|+.|.|..|+ ..+|+.+|||++.+.. ......+++|+-+|+-+.|||+++++++|++..+.|+|
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 3567788899999999999998 4689999999997653 22345789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
.||+++|.|.+++-+.+. +++....++++||..|+.|+|. .+|+|||+||+|+|+|..+++||+|||+|..-..+.
T Consensus 91 lEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk 166 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK 166 (786)
T ss_pred EEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence 999999999999987765 7888899999999999999955 569999999999999999999999999998753332
Q ss_pred CcceeccccccccccCCcccCCCCCC-cccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIIS-PKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.....+|.|.|.|||++++.+|. .++||||.|||+|.++||+.||++. .+.....+.
T Consensus 167 ---lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV-------------- 224 (786)
T KOG0588|consen 167 ---LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKV-------------- 224 (786)
T ss_pred ---cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHH--------------
Confidence 23455899999999999998765 5899999999999999999999852 222222111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+.+.++...+.++++++.+|+..||++|.|++||.+.
T Consensus 225 -~~G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 225 -QRGVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -HcCcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 122344555677889999999999999999999999653
No 52
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.8e-38 Score=324.88 Aligned_cols=261 Identities=27% Similarity=0.446 Sum_probs=209.8
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
.++|.+.+.||+|+||.||++... ++..+|+|.+..........+.+|++++++++||||+++++++...+..+
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 457888899999999999999742 34668999987655555677999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEE
Q 005278 488 LVLEFMPNGSLEKWLYSHN------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAH 555 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~k 555 (704)
+||||+++++|.+++.... ..+++..++.++.|++.|++|| |+.+++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~l---H~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCcEE
Confidence 9999999999999997432 2489999999999999999999 457899999999999999999999
Q ss_pred EeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhh
Q 005278 556 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKES 634 (704)
Q Consensus 556 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~ 634 (704)
|+|||++................+++.|+|||++.+..++.++|||||||++|||++ |..||......+ ....+..
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~- 237 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQ- 237 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc-
Confidence 999999986643322222233346788999999998899999999999999999998 899986542211 1111110
Q ss_pred cCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHh
Q 005278 635 LPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696 (704)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 696 (704)
... ...+..++.++.+++.+||+.+|.+||++.|+.+.|+++.++.
T Consensus 238 --~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~ 283 (288)
T cd05093 238 --GRV--------------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS 283 (288)
T ss_pred --CCc--------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence 000 0011123456889999999999999999999999999988653
No 53
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.7e-38 Score=327.35 Aligned_cols=266 Identities=22% Similarity=0.270 Sum_probs=204.5
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.++|+..+.||+|+||.||+++.. ++..+|+|.+.... ......+.+|++++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 368999999999999999999865 68899999987543 2344678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+++|+|.+++.... .+++..+..++.|++.|++|||+ ..+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc--
Confidence 999999999997654 47889999999999999999964 2369999999999999999999999999997653321
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC---cch-h-----
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG---LTE-V----- 642 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~-~----- 642 (704)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||...... .+........... ... .
T Consensus 159 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (331)
T cd06649 159 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRPR 234 (331)
T ss_pred --cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCcccc
Confidence 22346899999999999989999999999999999999999999653211 1111111000000 000 0
Q ss_pred ------------ccccc---------hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 643 ------------VDANL---------VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 643 ------------~~~~~---------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+.. ............++.++.+++.+||+.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 235 PPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 00000000011245678999999999999999999999765
No 54
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.4e-38 Score=318.24 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=202.5
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
++|+..+.||+|+||.||+|++.++..+|+|.+... ....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 457788899999999999999888889999987643 2334678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++......+++..+..++.|++.|++||| +.+|+||||+|+||+++.++.+|++|||.++........ ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-~~ 158 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-SS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee-cc
Confidence 99999999865556899999999999999999995 578999999999999999999999999999865432211 11
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....++..|+|||++.+..++.++||||||+++|||++ |+.||..... ......+..... .
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~-----~----------- 220 (256)
T cd05114 159 SGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFR-----L----------- 220 (256)
T ss_pred CCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC-----C-----------
Confidence 22345678999999988889999999999999999999 8999865321 111111111000 0
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
..+...+..+.+++.+||+.+|++||+++|+++.|
T Consensus 221 -~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 221 -YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 00112245688999999999999999999999886
No 55
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=3e-38 Score=321.54 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=203.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCC----EEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGT----NVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
++|+..+.||+|+||+||+|.+. +++ .+++|.+..... .....+..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 46788899999999999999864 454 477787754322 233567888889999999999999998754 45678
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
++||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPD 162 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCccceeccCC
Confidence 99999999999999877667899999999999999999995 578999999999999999999999999999876543
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
..........++..|+|||+..++.++.++|||||||++||+++ |..||.+.... ...++.....
T Consensus 163 ~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~------------ 228 (279)
T cd05111 163 DKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGE------------ 228 (279)
T ss_pred CcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCC------------
Confidence 33222334457789999999988899999999999999999998 99998763221 1122221110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
....+..++..+.+++..||+.+|++||++.|+.+.|..+.++
T Consensus 229 -----~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 229 -----RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred -----cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 0011112345677899999999999999999999999887654
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-38 Score=329.00 Aligned_cols=241 Identities=22% Similarity=0.252 Sum_probs=194.6
Q ss_pred ccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999985 478999999987543 223356788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+|.+++...+ .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYL---HSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Ccccc
Confidence 9999987654 478999999999999999999 56789999999999999999999999999987542211 12234
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSV 656 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (704)
..||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~~~~~~---------------~~~ 214 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEE---------------IRF 214 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCC---------------CCC
Confidence 5699999999999999999999999999999999999999965211 11111100000 011
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 657 KIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 657 ~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
+...+.++.+++.+|++.||++|| ++.|+++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 123456788999999999999999 7888864
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.3e-39 Score=326.05 Aligned_cols=250 Identities=24% Similarity=0.313 Sum_probs=212.5
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe-EEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF-KALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv~ 490 (704)
++|..++++|+|+||.++..+.+ ++..+++|.+.... ....+...+|+.++++++|||||.+.+.|.+.+. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888999999999999998754 68899999987654 3345578999999999999999999999998887 99999
Q ss_pred eccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 491 EFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+|++||++.+.+.+.+ ..+++..+.+++.|++.|+.||| +..|+|||||+.||+++.++.|||+|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 9999999999998654 77999999999999999999995 5779999999999999999999999999999886543
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
.......||+.||+||.+.+.+|..|+||||+||++|||++-+.+|.+... ...+.... ..
T Consensus 161 --~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki~------------~~ 221 (426)
T KOG0589|consen 161 --SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKIN------------RG 221 (426)
T ss_pred --hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHHh------------hc
Confidence 234556899999999999999999999999999999999999999987322 11111111 11
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+.+..++.++..++..|++.+|+.||++.+++.+
T Consensus 222 --~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 222 --LYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --cCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 1233455667889999999999999999999999877
No 58
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=339.45 Aligned_cols=255 Identities=27% Similarity=0.451 Sum_probs=218.6
Q ss_pred CccccccccCceEEEEEEE-CCC----CEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 418 NECNLLGTGSFGSVYKGTL-FDG----TNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~-~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
...++||+|+||+||+|.+ .+| -+||+|++.... .+...++.+|+-+|.+++|||+++++|+|..+. ..||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 3457899999999999985 344 468889886543 345678999999999999999999999998766 789999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
||+.|+|.+|++.++..+.....+.+..|||+||.|| |++++|||||.++|||+.+-..+||.|||+|+........
T Consensus 778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YL---e~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e 854 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYL---EEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE 854 (1177)
T ss_pred hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHH---HhcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc
Confidence 9999999999999999999999999999999999999 5688999999999999999999999999999998776655
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.......-.+.|||-|.+....++.++|||||||++||++| |..||++....+. +.+.+.
T Consensus 855 y~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-------------------~dlle~ 915 (1177)
T KOG1025|consen 855 YSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-------------------PDLLEK 915 (1177)
T ss_pred ccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-------------------hHHHhc
Confidence 55555566888999999999999999999999999999999 9999987533211 222333
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
+.+.+.++-|+.+++.++.+||..|++.||+++++...+.++.++
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 445677778999999999999999999999999999998886543
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=330.16 Aligned_cols=244 Identities=24% Similarity=0.266 Sum_probs=198.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57888999999999999999965 68999999987542 123456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++.....++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 98 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~- 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYL---HSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT- 172 (329)
T ss_pred cCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence 9999999999998654 478888899999999999999 45789999999999999999999999999998764322
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+... . ..........
T Consensus 173 ----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~-~~~~~i~~~~------------ 231 (329)
T PTZ00263 173 ----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----F-RIYEKILAGR------------ 231 (329)
T ss_pred ----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----H-HHHHHHhcCC------------
Confidence 234689999999999999999999999999999999999999965211 1 1111110000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
...+..++..+.+++.+||+.||++||+ ++|+++
T Consensus 232 ---~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 232 ---LKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ---cCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 0011123456788999999999999997 566653
No 60
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.9e-38 Score=322.24 Aligned_cols=265 Identities=19% Similarity=0.266 Sum_probs=200.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|...+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57889999999999999999864 68999999986543 22345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++ |+|.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~-- 158 (288)
T cd07871 85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYC---HKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK-- 158 (288)
T ss_pred CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc--
Confidence 97 499999987666688999999999999999999 567899999999999999999999999999976533221
Q ss_pred eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh-c-CCC-cch-------
Q 005278 573 IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES-L-PDG-LTE------- 641 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~-~~~-~~~------- 641 (704)
......+++.|+|||++.+ ..++.++||||+||++|||+||+.||.+....+. +....... . +.. +..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd07871 159 TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE-LHLIFRLLGTPTEETWPGITSNEEF 237 (288)
T ss_pred cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChHHhhccccchhh
Confidence 1233468999999998765 5689999999999999999999999975322111 11110000 0 000 000
Q ss_pred --hccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 642 --VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 642 --~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..... ...........+..+++.+|++.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~-~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 238 RSYLFPQYRAQ-PLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hccccCccCCC-chHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000110000 000111123456789999999999999999999964
No 61
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=4.4e-38 Score=324.46 Aligned_cols=268 Identities=21% Similarity=0.266 Sum_probs=200.7
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.++|+..+.||+|+||.||+|+.. +++.||||++..... .....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999965 689999999875432 223467789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++ +++.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYI---HQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC--
Confidence 995 689888887666688999999999999999999 45789999999999999999999999999997653222
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC---cchh-----
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG---LTEV----- 642 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~----- 642 (704)
.......+|+.|+|||++.+ ..++.++||||+||++|||++|..||.+.......+........... +...
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd07869 158 HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPH 237 (303)
T ss_pred ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccc
Confidence 12234568999999998765 45788999999999999999999999764322111111111000000 0000
Q ss_pred cccc-ch----hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 643 VDAN-LV----REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 643 ~~~~-~~----~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.++. +. ............+..+.+++.+|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 238 FKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 00 000000001112356788999999999999999999964
No 62
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=4.4e-38 Score=315.61 Aligned_cols=248 Identities=27% Similarity=0.433 Sum_probs=199.0
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
+.||+|+||.||+|+.. +++.+|+|.+.... ......+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999864 78999999876443 33456789999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccc
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 578 (704)
.+++......+++..++.++.|++.|++|| |+.+|+||||||+||+++.++.+|++|||++................
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 157 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYL---ESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQ 157 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCC
Confidence 999987666689999999999999999999 56789999999999999999999999999998654322111112223
Q ss_pred ccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhh
Q 005278 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVK 657 (704)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (704)
.+..|+|||.+.++.++.++||||||+++|||++ |..||...... .......... ....+
T Consensus 158 ~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~-----------------~~~~~ 218 (252)
T cd05084 158 IPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGV-----------------RLPCP 218 (252)
T ss_pred CceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCC-----------------CCCCc
Confidence 4567999999998889999999999999999998 88888653221 1111111000 00112
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 658 IDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 658 ~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
..++..+.+++.+|++.+|++||++.|+.++|+
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 234567889999999999999999999999886
No 63
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=3.8e-38 Score=317.83 Aligned_cols=255 Identities=22% Similarity=0.397 Sum_probs=207.1
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|+..++||+|+||.||+|...++..||+|.+... ....+.+.+|+.+++.++|+||+++++.+.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3578889999999999999999888889999987643 223567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT- 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCCcee-
Confidence 999999999753 455888999999999999999995 578999999999999999999999999999876543221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||+..+..++.++|||||||++|||+| |..||...... ....++.....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~--------------- 222 (261)
T cd05072 160 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYR--------------- 222 (261)
T ss_pred ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCC---------------
Confidence 1222346778999999988889999999999999999998 99998653211 11111111100
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.+....++.++.+++.+|++.+|++||+++++.+.|+++
T Consensus 223 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 --MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 011113456788999999999999999999999999863
No 64
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.9e-38 Score=322.95 Aligned_cols=261 Identities=27% Similarity=0.436 Sum_probs=209.7
Q ss_pred CCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.+|...+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++.+++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45777889999999999999742 355689999876555555679999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 005278 489 VLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~ 553 (704)
||||+++++|.+++..+. ..+++..++.++.|++.|++|| |+.+|+||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccCcceEEEccCCc
Confidence 999999999999997532 3478999999999999999999 5678999999999999999999
Q ss_pred EEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHH
Q 005278 554 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 554 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 632 (704)
++|+|||++................++..|+|||++.+..++.++|||||||++|||+| |+.||......+ ......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~~ 239 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECIT 239 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHh
Confidence 99999999986644332222333456788999999998999999999999999999999 999986532211 111111
Q ss_pred hhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhh
Q 005278 633 ESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFL 697 (704)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 697 (704)
. .... ..+..++..+.+++.+||+.+|++||++.+|+++|+++.+..+
T Consensus 240 ~---~~~~--------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~~ 287 (291)
T cd05094 240 Q---GRVL--------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKATP 287 (291)
T ss_pred C---CCCC--------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhcC
Confidence 0 0000 0111235678899999999999999999999999999976543
No 65
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.5e-38 Score=328.06 Aligned_cols=253 Identities=22% Similarity=0.284 Sum_probs=202.2
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+..|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999965 58999999997543 123456888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~--- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT--- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc---
Confidence 9999999999997654 4788899999999999999995 57899999999999999999999999999986533
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
......||+.|+|||++.+..++.++|||||||++|||++|..||......+ .... +... ..... .+...
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~-i~~~-~~~~~---~~~~~-- 223 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWEN-LKYW-KETLQ---RPVYD-- 223 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHH-HHhc-ccccc---CCCCC--
Confidence 1234468999999999999999999999999999999999999997532111 0011 0000 00000 00000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....++.++.+++.+|++.+|++||++.|+++.
T Consensus 224 ----~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 224 ----DPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----ccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0001345678899999999999999999999764
No 66
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.4e-38 Score=325.87 Aligned_cols=244 Identities=24% Similarity=0.301 Sum_probs=198.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888999999999999999865 68999999986542 123456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++...+ .+++.....++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-- 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYL---HSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-- 154 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC--
Confidence 9999999999997654 478889999999999999999 5678999999999999999999999999999865432
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~------------ 214 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKILAGK------------ 214 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC------------
Confidence 1234689999999999988899999999999999999999999975321 11111100000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
...+......+.+++.+|++.||.+||+ +.|+++
T Consensus 215 ---~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 215 ---LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred ---cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence 0011123456788999999999999995 777754
No 67
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.5e-38 Score=321.66 Aligned_cols=254 Identities=28% Similarity=0.479 Sum_probs=204.9
Q ss_pred CCCCccccccccCceEEEEEEECC------CCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD------GTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
++|...+.||+|+||.||+|...+ ++.||||.+...... ....+.+|+++++.++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 467788999999999999998633 478999998765433 4568999999999999999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCC-------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 488 LVLEFMPNGSLEKWLYSHN-------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
+||||+++|+|.+++...+ ..+++..+..++.|++.|+.|| |+.+++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYL---ASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHH---hhCCeeccccccceEEEcCCCeE
Confidence 9999999999999997542 3478889999999999999999 56789999999999999999999
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHh
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 633 (704)
+|+|||+++...............+++.|+|||++.+..++.++|||||||++|||++ |..||...... .....+..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~~ 239 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECITQ 239 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHc
Confidence 9999999986543322222233456789999999999999999999999999999999 99998653221 11111110
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
+. ....+..++..+.+++.+||+.+|++||++.||++.|+
T Consensus 240 ----~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 240 ----GR-------------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ----CC-------------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 00 00111234567889999999999999999999999886
No 68
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.8e-38 Score=328.02 Aligned_cols=260 Identities=26% Similarity=0.429 Sum_probs=204.5
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccch-hhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC-C
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLE-RASRSFDSECEILRSI-RHRNLIKIISNCCNI-D 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 484 (704)
.++|++.+.||+|+||.||+|... +++.||+|+++.... .....+..|+.+++++ +|+||+++++++... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357889999999999999999632 357899999875432 2345678899999999 899999999988654 5
Q ss_pred eEEEEEeccCCCCHHHHHhhCC----------------------------------------------------------
Q 005278 485 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 506 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 506 (704)
..++++||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 6789999999999999986321
Q ss_pred --CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccccccccc
Q 005278 507 --YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584 (704)
Q Consensus 507 --~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~ 584 (704)
..+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++.+.............++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 25789999999999999999995 5789999999999999999999999999998764433222233345678899
Q ss_pred CCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHH
Q 005278 585 APEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLS 663 (704)
Q Consensus 585 aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (704)
|||++.+..++.++|||||||++|||++ |..||.+....+ .+..... .+.. ...+..++.+
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~----~~~~-------------~~~~~~~~~~ 304 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLK----EGTR-------------MRAPEYATPE 304 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHh----ccCC-------------CCCCccCCHH
Confidence 9999999999999999999999999998 999987532211 1111111 1000 0011233457
Q ss_pred HHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 664 IMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 664 l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
+.+++.+||+.+|++||++.|++++|+++.+
T Consensus 305 ~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 305 IYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8899999999999999999999999998765
No 69
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=5.5e-38 Score=316.65 Aligned_cols=255 Identities=27% Similarity=0.432 Sum_probs=206.2
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|+..+.||+|++|.||+|...+++.||+|.++... ...+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 45688889999999999999998778899999986542 23567889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++++|.+++.... ..+++..+..++.+++.|+.||| +.+|+||||||+||++++++.++|+|||++.........
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 9999999997543 56899999999999999999995 578999999999999999999999999999877532211
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.......+..|+|||+..+..++.++||||||+++|||+| |+.||.+.... .....+....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~---------------- 221 (261)
T cd05068 160 AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGY---------------- 221 (261)
T ss_pred ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC----------------
Confidence 1112223568999999998899999999999999999999 99998763211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+.+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 222 -~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 222 -RMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred -CCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 0011123456788999999999999999999999999863
No 70
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5e-38 Score=320.91 Aligned_cols=256 Identities=26% Similarity=0.428 Sum_probs=203.8
Q ss_pred CCCCccccccccCceEEEEEEE-----CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-----FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
++|+..+.||+|+||.||+|.. .++..||+|.+.... ......+.+|++++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677888999999999999974 246789999987433 2334678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC----------------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 005278 489 VLEFMPNGSLEKWLYSH----------------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM 552 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~----------------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~ 552 (704)
||||+++|+|.+++... ...+++.....++.|++.|++||| +.+|+||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcCCC
Confidence 99999999999998632 124788889999999999999995 57899999999999999999
Q ss_pred cEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHH
Q 005278 553 TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWV 631 (704)
Q Consensus 553 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~ 631 (704)
.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||.+... ....+.+
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~~ 239 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEMV 239 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH
Confidence 999999999987644332222333446778999999988889999999999999999998 8889865321 1111111
Q ss_pred HhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.... ....+..++..+.+++..||+.+|++||++.+|.+.|+++
T Consensus 240 ~~~~-----------------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05090 240 RKRQ-----------------LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRSW 283 (283)
T ss_pred HcCC-----------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhcC
Confidence 1100 0111223456788899999999999999999999998753
No 71
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3e-38 Score=318.63 Aligned_cols=256 Identities=29% Similarity=0.472 Sum_probs=210.5
Q ss_pred HhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
...+|+..+.||+|+||.||+|...+++.+|+|.+..........+..|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 34578888999999999999999888999999998766555567799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..+..++.+++.|++||| +.+|+||||+|+||++++++.+||+|||.+.........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 9999999999853 445899999999999999999995 578999999999999999999999999999876432211
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....++..|+|||+..+..++.++||||||+++|+|++ |+.||...... ..........
T Consensus 161 --~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~--------------- 221 (261)
T cd05148 161 --SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAGY--------------- 221 (261)
T ss_pred --ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhCC---------------
Confidence 123346778999999988889999999999999999998 89998653211 1111111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+.+..++..+.+++.+||+.+|++||+++++++.|+.+
T Consensus 222 --~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 222 --RMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred --cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 0111224456788999999999999999999999999863
No 72
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.6e-38 Score=342.21 Aligned_cols=250 Identities=23% Similarity=0.239 Sum_probs=202.7
Q ss_pred CCCccccccccCceEEEEEEEC-C-CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-D-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.|...+.||+|+||.||+|... + ++.||+|.+..........+..|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4888899999999999999743 4 6788999876554555567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 494 PNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 494 ~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
++|+|.+++.. ....+++.....++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEV---HSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH---HhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 99999998863 234578899999999999999999 557899999999999999999999999999987654332
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
........||++|+|||++.+..++.++|||||||++|||++|+.||..... ............
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~~----------- 288 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGKY----------- 288 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCC-----------
Confidence 2223445699999999999999999999999999999999999999965221 111111110000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+.+..++..+.+++..||+.+|++||++.+++.
T Consensus 289 ---~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 289 ---DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ---CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 0111234567889999999999999999999875
No 73
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=337.77 Aligned_cols=259 Identities=24% Similarity=0.310 Sum_probs=210.3
Q ss_pred hCCCCccccccccCceEEEEEEECCC-CEEEEEEeeccchhhhHHHHHHHHHHHhcC-CCCCceEEee-eee------CC
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDG-TNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIISN-CCN------ID 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~-~~~------~~ 484 (704)
..++++.+.|.+|||+.||.|+...+ ..+|+|++-...+..-+...+|+++|++|+ |+|||.+++. ... ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 34667788999999999999997655 999999987776677788999999999996 9999999993 211 23
Q ss_pred eEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 485 FKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
+++|.||||.+|.|.+++... ...+.+.++++|+.++++|+++||. .+.+|||||||-+|||++.+++.||||||.|.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGSat 194 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGSAT 194 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccccc
Confidence 678999999999999999843 2339999999999999999999998 67899999999999999999999999999987
Q ss_pred ecCCCCCcce-------eccccccccccCCccc---CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh
Q 005278 564 LLGEGDDSVI-------QTMTIATIGYMAPEYG---SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 564 ~~~~~~~~~~-------~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 633 (704)
-......... .-....|+.|+|||.+ .+...++|+|||++||+||-|+....||++..
T Consensus 195 t~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg------------ 262 (738)
T KOG1989|consen 195 TKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG------------ 262 (738)
T ss_pred cccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc------------
Confidence 5433221100 0112479999999964 67789999999999999999999999998721
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
...+++..+ .++....++..+.+||..||++||.+||++.||+..+.++..+
T Consensus 263 -----~laIlng~Y-----~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 263 -----KLAILNGNY-----SFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred -----ceeEEeccc-----cCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 122333322 2233346678899999999999999999999999999887653
No 74
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.2e-38 Score=324.96 Aligned_cols=238 Identities=22% Similarity=0.241 Sum_probs=191.9
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||.||+|+.. +++.||+|++.... ......+..|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999865 58899999987532 23345678899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccc
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 578 (704)
.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... .......
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTNTFC 154 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Ccccccc
Confidence 99997654 4889999999999999999994 5789999999999999999999999999997543221 1223456
Q ss_pred ccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ...+.
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~---------------~~~~~ 214 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEP---------------LRFPD 214 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCC---------------CCCCC
Confidence 8999999999999999999999999999999999999997521 122222111110 01112
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCC---HHHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVS---MKDAA 686 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt---~~ev~ 686 (704)
..+..+.+++.+||+.||++||+ +.|++
T Consensus 215 ~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 215 GFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred cCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 34566789999999999999986 45554
No 75
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-38 Score=307.99 Aligned_cols=246 Identities=26% Similarity=0.331 Sum_probs=204.1
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
..+|++.+.+|+|.||.|-+|. ...|+.||||.+++... ++.-.+.+|+++|..++||||+.++++|...+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 3578888999999999999998 46899999999986643 3344688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||..+|.|++|+.+.+. +++.....+++||..|+.|+ |+.+++|||+|.+|||+|.++++||+|||++-.+.+..
T Consensus 132 MEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYC---HknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~k 207 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYC---HKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKK 207 (668)
T ss_pred EEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHH---hhccceecccchhheeecCCCCeeeeccchhhhhcccc
Confidence 999999999999987654 88999999999999999999 67889999999999999999999999999998875433
Q ss_pred CcceeccccccccccCCcccCCCCCC-cccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIIS-PKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
..+.++|+|-|.+||++.+.+|. +.+|-||+||++|-++.|..||++.. ....+++.. .
T Consensus 208 ---fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs------------~ 267 (668)
T KOG0611|consen 208 ---FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQIS------------R 267 (668)
T ss_pred ---HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhh------------c
Confidence 35667999999999999988764 57999999999999999999998832 111111111 1
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.+..... +....-+|++|+..+|++|.|+.||..
T Consensus 268 GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 268 GAYREPET----PSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred ccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhh
Confidence 11111111 233445899999999999999999864
No 76
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-37 Score=318.87 Aligned_cols=270 Identities=28% Similarity=0.414 Sum_probs=205.7
Q ss_pred CCCCccccccccCceEEEEEEE-----CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-----FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 487 (704)
.+|+..+.||+|+||.||+|.. .+++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999974 2578999999876555556788999999999999999999998754 34678
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+|+||+++|+|.+++......+++..+..++.|++.|++|| |+.+|+||||||+||++++++.+||+|||++.....
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~L---H~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~ 160 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYL---GSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQ 160 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHH---HHCCceeccCCHhhEEECCCCeEEECCCcccccccC
Confidence 99999999999999987666689999999999999999999 567899999999999999999999999999987654
Q ss_pred CCCcce-eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 568 GDDSVI-QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 568 ~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
...... .....++..|+|||+..+..++.++|||||||++|||++|..|+..... .+................
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 234 (284)
T cd05081 161 DKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA------EFMRMMGNDKQGQMIVYH 234 (284)
T ss_pred CCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch------hhhhhcccccccccchHH
Confidence 322111 1112344569999999888899999999999999999998877543211 111100000000000000
Q ss_pred ---chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 647 ---LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 647 ---~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
........+.+..++..+.+++.+||+.+|++||||.||++.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~~ 284 (284)
T cd05081 235 LIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284 (284)
T ss_pred HHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhcC
Confidence 00001111223345677999999999999999999999999998763
No 77
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4e-38 Score=320.55 Aligned_cols=256 Identities=24% Similarity=0.394 Sum_probs=202.5
Q ss_pred HhCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF 485 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 485 (704)
..++|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567999999999999999998743 35679999986432 2344568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC---------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 005278 486 KALVLEFMPNGSLEKWLYSHN---------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHV 556 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl 556 (704)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCEEE
Confidence 999999999999999997432 23577888999999999999995 578999999999999999999999
Q ss_pred eeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhc
Q 005278 557 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 557 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
+|||+++...............+++.|+|||++.++.++.++|||||||++|||++ |..||.+... ........
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~-----~~~~~~~~ 235 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN-----EQVLRFVM 235 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHH
Confidence 99999986543322222223345788999999998899999999999999999999 7888865321 11111111
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
..... ..+..++..+.+++.+|++.+|++||++.|+++.|+
T Consensus 236 ~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 236 EGGLL--------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred cCCcC--------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 11000 011234567889999999999999999999999886
No 78
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-38 Score=312.72 Aligned_cols=256 Identities=27% Similarity=0.385 Sum_probs=198.3
Q ss_pred HHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch---------h-----hhHHHHHHHHHHHhcCCCCCce
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE---------R-----ASRSFDSECEILRSIRHRNLIK 475 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---------~-----~~~~~~~e~~~l~~l~h~niv~ 475 (704)
....++|+....||+|.||.|-+|+. .+++.||||++.+... . ..+...+||.+|++++|||||+
T Consensus 93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~ 172 (576)
T KOG0585|consen 93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK 172 (576)
T ss_pred ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence 34567899999999999999999984 4799999999965321 0 1247889999999999999999
Q ss_pred EEeeeee--CCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 005278 476 IISNCCN--IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553 (704)
Q Consensus 476 l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~ 553 (704)
++++..+ .+..|||+|||..|.+.. ....+..++..+.+++++++..||+|| |.++||||||||+|+|++++|+
T Consensus 173 LiEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYL---H~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 173 LIEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYL---HYQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHH---HhcCeeccccchhheEEcCCCc
Confidence 9999976 457899999999888754 222333388999999999999999999 5688999999999999999999
Q ss_pred EEEeeeccceecCCCC---CcceeccccccccccCCcccCCC----CCCcccceeeHHHHHHHHhhCCCCCCcccccccc
Q 005278 554 AHVSDFGISKLLGEGD---DSVIQTMTIATIGYMAPEYGSEG----IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMS 626 (704)
Q Consensus 554 ~kl~Dfgla~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~ 626 (704)
+||+|||.+.....+. ........+|||.|+|||...++ ..+.+.||||+||+||.++.|+.||-+...
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~---- 324 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE---- 324 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH----
Confidence 9999999998763332 12223446899999999987663 255689999999999999999999966221
Q ss_pred HHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+.-+ ..++...+ .++...+....+.+++.+++.+||++|.+..||...
T Consensus 325 ~~l~---------~KIvn~pL-----~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 325 LELF---------DKIVNDPL-----EFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred HHHH---------HHHhcCcc-----cCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 1111 11111111 111222345678899999999999999999998644
No 79
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=307.71 Aligned_cols=260 Identities=25% Similarity=0.333 Sum_probs=196.9
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----eEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNID-----FKALV 489 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 489 (704)
.|...+++|.|+||.||+|... +++.||||+.-.+ .+--.+|.++|+.+.|||||++.-+|.... ...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d----~r~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQD----KRYKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCC----CCcCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 5667789999999999999965 5799999987433 223356999999999999999999886532 23489
Q ss_pred EeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeeccceec
Q 005278 490 LEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGISKLL 565 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla~~~ 565 (704)
||||+. +|.++++. .+..++...+.-+.+|+.+|+.|| |+.+|+||||||+|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yL---h~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYL---HSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHH---HhcCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999987 99999983 356688888999999999999999 55899999999999999965 89999999999998
Q ss_pred CCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh--
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV-- 642 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 642 (704)
..+..+. ....|..|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+. .+..++...++-.-...-+++
T Consensus 177 ~~~epni---SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 177 VKGEPNI---SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred ccCCCce---eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCCCHHHHhh
Confidence 7665442 3357889999998776 46999999999999999999999988772 223334444432222211111
Q ss_pred cc--------ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 643 VD--------ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 643 ~~--------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+. +.+.............+++..+++.++++++|.+|.++.|+++
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11 1111111000122344677899999999999999999999954
No 80
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-38 Score=327.28 Aligned_cols=245 Identities=25% Similarity=0.284 Sum_probs=198.0
Q ss_pred hCCCCccccccccCceEEEEEEECC--CCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.++|+..+.||+|+||.||+|.... +..||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4578899999999999999998543 3689999986542 2234568889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
||||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++......
T Consensus 109 v~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~ 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYL---QSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC
Confidence 999999999999998654 488899999999999999999 5678999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.....||+.|+|||++.+..++.++|||||||++|||++|..||..... ...+ . ...... .
T Consensus 185 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~-~-~i~~~~-------~- 245 (340)
T PTZ00426 185 -----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP----LLIY-Q-KILEGI-------I- 245 (340)
T ss_pred -----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH----HHHH-H-HHhcCC-------C-
Confidence 1234689999999999888899999999999999999999999975311 1100 1 000100 0
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
..+...+..+.+++.+|++.||++|+ +++|+++
T Consensus 246 ------~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 246 ------YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ------CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 01112344577899999999999995 7888754
No 81
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.6e-37 Score=317.94 Aligned_cols=267 Identities=21% Similarity=0.209 Sum_probs=200.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999975 68899999987543 2234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++++.+..+. .....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 155 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN- 155 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc-
Confidence 99987665544 33445889999999999999999995 57899999999999999999999999999987643221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH--hhcCCC----------c
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK--ESLPDG----------L 639 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~--~~~~~~----------~ 639 (704)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||......+. +..... ...+.. .
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07848 156 ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPRF 234 (287)
T ss_pred ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccchh
Confidence 122334689999999999888899999999999999999999999976322110 000000 000000 0
Q ss_pred chhccccchh-hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 TEVVDANLVR-EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 ~~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+.... ..........++..+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 235 HGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred cccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 00000111234567999999999999999999999874
No 82
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.8e-38 Score=320.91 Aligned_cols=260 Identities=27% Similarity=0.452 Sum_probs=206.8
Q ss_pred HHhCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
...++|+..+.||+|+||.||+|... +...+|+|.+.... ......+.+|+++++++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34567888999999999999999853 23679999987543 23445688999999999 899999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhC---------------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 005278 484 DFKALVLEFMPNGSLEKWLYSH---------------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL 548 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~ 548 (704)
+..+++|||+++|+|.+++... ...+++..++.++.|++.|++||| +.+|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEE
Confidence 9999999999999999999642 345889999999999999999994 5789999999999999
Q ss_pred CCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 549 DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 549 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
+.++.+|++|||+++.+.............++..|+|||+..+..++.++|||||||++||+++ |..||......+ .
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~ 243 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE--L 243 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHH--H
Confidence 9999999999999987654332222223345678999999988899999999999999999998 889986532111 1
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
..... .. .....+..++..+.+++.+|++.+|++|||+.|+++.|+++.
T Consensus 244 ~~~~~----~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FKLLK----EG-------------YRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHH----cC-------------CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11100 00 000112234567889999999999999999999999998864
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.5e-38 Score=324.71 Aligned_cols=241 Identities=22% Similarity=0.255 Sum_probs=193.9
Q ss_pred ccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+.||+|+||.||+++. .+|+.||+|++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3689999999999985 468999999987543 223456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+|..++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++....... .....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYL---HSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--ATMKT 154 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Ccccc
Confidence 9999887654 488999999999999999999 45789999999999999999999999999987532211 11233
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSV 656 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (704)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..... .... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~-~~~~~----~~~~---------------~~~ 214 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER-LFELI----LMEE---------------IRF 214 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHH----hcCC---------------CCC
Confidence 468999999999999999999999999999999999999996532110 00110 0000 001
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 657 KIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 657 ~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
+..++..+.+++.+|++.||++|| ++.++++
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 215 PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 123456788999999999999998 7888765
No 84
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.4e-38 Score=314.98 Aligned_cols=252 Identities=25% Similarity=0.366 Sum_probs=203.2
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
++|...+.||+|+||.||+|+..++..+|+|.+.... ...+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3577888999999999999998777789999886432 234678999999999999999999999998888999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++......+++..++.++.|++.|++|| |+.+++|+||||+||+++.++.+||+|||.++....... ...
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~ 158 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYL---ESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TSS 158 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-eec
Confidence 9999999987655689999999999999999999 567899999999999999999999999999987644321 112
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....++..|+|||+..+..++.++|||||||++|||++ |..||......+ ....+.....
T Consensus 159 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~--~~~~~~~~~~----------------- 219 (256)
T cd05113 159 VGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE--TVEKVSQGLR----------------- 219 (256)
T ss_pred CCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH--HHHHHhcCCC-----------------
Confidence 22346678999999988889999999999999999999 999986532211 1111110000
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
...+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 220 LYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 0001123467889999999999999999999998763
No 85
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-37 Score=323.35 Aligned_cols=199 Identities=25% Similarity=0.331 Sum_probs=174.1
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.++|+..+.||+|+||.||+|+.. ++..+|+|.+.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999865 68899999887543 2344678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+++|+|.+++.... .+++.....++.+++.|++|||+ ..+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~-- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 158 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc--
Confidence 999999999997654 37888999999999999999964 3469999999999999999999999999987653221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 --ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred --cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1234689999999999988899999999999999999999999975
No 86
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=327.18 Aligned_cols=249 Identities=27% Similarity=0.407 Sum_probs=210.7
Q ss_pred CccccccccCceEEEEEEEC--CC--CEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 418 NECNLLGTGSFGSVYKGTLF--DG--TNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
...++||+|.||.|++|.|. +| ..||||.++..... ....|.+|+.+|-+|+|+|+++++|.+.+ ....+|||.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 44578999999999999975 23 46899999866533 66889999999999999999999999988 567899999
Q ss_pred cCCCCHHHHHhh-CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
++.|+|.+.|++ ....+.....-.++.|||.|+.|| ..++.||||+.++|+++-....+||+|||+.+-++.....
T Consensus 192 aplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YL---eskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~ 268 (1039)
T KOG0199|consen 192 APLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYL---ESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM 268 (1039)
T ss_pred cccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence 999999999997 566688888999999999999999 7788999999999999999999999999999999776654
Q ss_pred ceec-cccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 572 VIQT-MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 572 ~~~~-~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
..++ ...-...|+|||.+....++.++|||+|||++|||+| |..||-+.... .+-+.+|
T Consensus 269 Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~--------------qIL~~iD----- 329 (1039)
T KOG0199|consen 269 YVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI--------------QILKNID----- 329 (1039)
T ss_pred eEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH--------------HHHHhcc-----
Confidence 4333 3456888999999999999999999999999999999 77898763211 0111222
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
++.....+..|+.++++++..||...|++||++..+.+.+
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 3345667789999999999999999999999999997554
No 87
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-37 Score=317.16 Aligned_cols=260 Identities=23% Similarity=0.414 Sum_probs=207.1
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCC----EEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGT----NVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
.++|+..+.||+|+||+||+|++ .+++ .||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 35788889999999999999985 3454 48999986543 33456788999999999999999999998754 467
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+++||+++|+|.+++......+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYL---EEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999999987666689999999999999999999 567899999999999999999999999999987754
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
...........+++.|+|||...+..++.++|||||||++||+++ |..||+.... .....++.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~---------- 229 (279)
T cd05109 162 DETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGER---------- 229 (279)
T ss_pred ccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCc----------
Confidence 322222222345678999999988889999999999999999998 8899865321 112222221100
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHh
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 696 (704)
...+..++..+.+++..||+.||++||++.|+++.|+++..+.
T Consensus 230 -------~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 -------LPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -------CCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0111234567889999999999999999999999998886554
No 88
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-37 Score=323.68 Aligned_cols=242 Identities=21% Similarity=0.267 Sum_probs=195.1
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+.||+|+||.||+++.. +++.||+|++.... ......+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36899999999999854 68999999997543 233456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++...... .....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYL---HSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMKT 154 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--ccccc
Confidence 9999887553 488999999999999999999 56789999999999999999999999999987542211 12233
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSV 656 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (704)
..||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... ...
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~---------------~~~ 214 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMED---------------IKF 214 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCC---------------ccC
Confidence 4689999999999988999999999999999999999999965211 11111110000 011
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 005278 657 KIDCLLSIMHLALDCCMESPEQRV-----SMKDAAAK 688 (704)
Q Consensus 657 ~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~~ 688 (704)
+...+.++.+++.+|++.||++|| ++.|+++.
T Consensus 215 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 215 PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 123455678899999999999997 78888753
No 89
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-37 Score=301.24 Aligned_cols=268 Identities=24% Similarity=0.287 Sum_probs=203.7
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCC-CceEEeeeeeCC-----
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRN-LIKIISNCCNID----- 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 484 (704)
...|+..++||+|+||+||+|+. .+|+.||+|+++.... .......+|+.+++.++|+| |+++.+++....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 34566778899999999999984 5799999999986643 34556789999999999999 999999998877
Q ss_pred -eEEEEEeccCCCCHHHHHhhCC---CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeec
Q 005278 485 -FKALVLEFMPNGSLEKWLYSHN---YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560 (704)
Q Consensus 485 -~~~lv~e~~~~gsL~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 560 (704)
..++|+||++. +|..++.... ..++...+..+++|+..|++|| |+.+|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~---H~~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFL---HSHGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecccCCcceEEECCCCcEeeeccc
Confidence 78899999965 9999998654 4577788999999999999999 66889999999999999999999999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh-cC--
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES-LP-- 636 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~-- 636 (704)
+|+...-.. ...+...+|..|.|||++.+. .|+...||||+||++.||++++.-|.+..+- .++....+.. .|
T Consensus 166 lAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 166 LARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFRIFRLLGTPNE 242 (323)
T ss_pred hHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHHHHHHcCCCCc
Confidence 999664222 224556789999999998876 7999999999999999999999888764331 1111111111 11
Q ss_pred CCcchhcc-ccchhhhhhh-------hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 637 DGLTEVVD-ANLVREEQAF-------SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 637 ~~~~~~~~-~~~~~~~~~~-------~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+.|..+.. +......+.. ...........+++.+|++++|.+|.+++.++++
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11211110 1111111111 1111112468899999999999999999999875
No 90
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=295.83 Aligned_cols=251 Identities=22% Similarity=0.322 Sum_probs=201.3
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.+.|++.+.||+|+|+.||++.. .+|+.+|+|++.... ....+.+++|+++.+.++||||+++.+.+.+....|+|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 46788889999999999999874 579999999886443 335678999999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---CCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE---NMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~---~~~~kl~Dfgla~~~~~ 567 (704)
|+|+||+|..-+-.. ..+++..+-..++||++++.|+ |..+|||||+||+|+++.+ ...+|++|||+|..+..
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yC---H~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~ 165 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYC---HSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND 165 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH---HhcCceeccCChhheeeeeccCCCceeecccceEEEeCC
Confidence 999999986655433 3367788888999999999999 6789999999999999963 44699999999998873
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
+ ......+|||+|||||++...+|+..+|||+-||++|-++.|..||.+.. ...+-+-+. ...+
T Consensus 166 g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~--~~rlye~I~-----------~g~y 229 (355)
T KOG0033|consen 166 G---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYEQIK-----------AGAY 229 (355)
T ss_pred c---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc--HHHHHHHHh-----------cccc
Confidence 2 33556789999999999999999999999999999999999999997621 111111111 0000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ..+......++..+++++|+..||++|.|+.|.++
T Consensus 230 d~---~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 230 DY---PSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred CC---CCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 00 11123344567788999999999999999988754
No 91
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.4e-37 Score=313.96 Aligned_cols=254 Identities=25% Similarity=0.386 Sum_probs=204.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.+|...+.||+|+||.||+|... .++.||+|.+... ....+.+.+|++++++++||||+++++++...+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 35777889999999999999864 5889999998644 233467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++... ...+++..+..++.|+++|++|| |+.+++||||||+||++++++.+||+|||++.........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~- 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT- 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeecccCcceEEEcCCCcEEeCCCccccccccceee-
Confidence 999999999754 34589999999999999999999 4578999999999999999999999999999876432211
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||+..+..++.++|||||||++|||++ |..||.+... ..+..... ...
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~-~~~------------ 222 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLE-KGY------------ 222 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHH-CCC------------
Confidence 1112234678999999998899999999999999999998 8899865211 11111110 000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
....+..++..+.+++.+||+.+|++||++.|+.++|+.+
T Consensus 223 -~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 223 -RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 0111223467789999999999999999999999999865
No 92
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5e-37 Score=310.86 Aligned_cols=258 Identities=22% Similarity=0.307 Sum_probs=207.2
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+++++.++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57888999999999999999854 78999999875422 233456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
||+++|+|.+++.. ....+++..+..++.|++.|++|| |+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHH---hhCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999998863 234578899999999999999999 567899999999999999999999999999987643
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
... ......+++.|+|||.+.+..++.++|+||||+++|||++|+.||..... ....+......... +
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~---~~~~~~~~~~~~~~-----~-- 226 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLFSLCQKIEQCDY-----P-- 226 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc---cHHHHHHHHhcCCC-----C--
Confidence 221 12234588899999999888899999999999999999999999864221 11222211110000 0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
......++..+.+++.+||+.+|++||++.+|++.++.++
T Consensus 227 ------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 227 ------PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ------CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0011234567889999999999999999999999998864
No 93
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.1e-38 Score=319.87 Aligned_cols=254 Identities=24% Similarity=0.399 Sum_probs=202.8
Q ss_pred CCCccccccccCceEEEEEEEC------CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
+|...+.||+|+||.||+|... ++..||+|+++.... ...+.+.+|+.+++.++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 4666789999999999999853 257899999875543 234568899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC---------------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 005278 489 VLEFMPNGSLEKWLYSH---------------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~ 553 (704)
++||+++++|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecCCCc
Confidence 99999999999998521 234788889999999999999994 578999999999999999999
Q ss_pred EEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHH
Q 005278 554 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 554 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 632 (704)
+||+|||+++...............+++.|+|||.+.++.++.++|||||||++|||++ |..||.+... ..+..
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~ 237 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDVIE 237 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 99999999887644333222334456789999999988889999999999999999998 8888865321 11211
Q ss_pred hhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 633 ESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
...... ....+.+++..+.+++..||+.+|++||++++|++.|+.
T Consensus 238 ~i~~~~--------------~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQ--------------VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCC--------------cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111110 011123456778899999999999999999999999875
No 94
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.4e-37 Score=312.66 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=201.9
Q ss_pred CCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+|+..+.||+|+||.||+|...++..+|+|.+.... .....+.+|++++++++||||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 577888999999999999998777889999986432 2345688899999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
++|.+++......+++..+..++.|++.|++|| |+.+++||||||+||++++++.+||+|||+++........ ...
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~~~ 159 (256)
T cd05059 84 GCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYL---ESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-SSQ 159 (256)
T ss_pred CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HHCCcccccccHhhEEECCCCcEEECCcccceeccccccc-ccC
Confidence 999999987656789999999999999999999 4578999999999999999999999999999876432211 111
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
...++..|+|||...+..++.++||||||+++||+++ |+.||...... .....+.... ..
T Consensus 160 ~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~-----------------~~ 220 (256)
T cd05059 160 GTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNS--EVVESVSAGY-----------------RL 220 (256)
T ss_pred CCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHH--HHHHHHHcCC-----------------cC
Confidence 2234567999999998899999999999999999999 88998653221 1111111000 00
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
..+..++.++.+++.+||+.+|++||++.|+++.|
T Consensus 221 ~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 221 YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 11123466789999999999999999999999876
No 95
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.3e-37 Score=315.99 Aligned_cols=266 Identities=24% Similarity=0.383 Sum_probs=203.0
Q ss_pred CccccccccCceEEEEEEE-----CCCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEEEE
Q 005278 418 NECNLLGTGSFGSVYKGTL-----FDGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKALV 489 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 489 (704)
...+.||+|+||+||++.. .++..||+|.+..... ...+.+.+|++++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7788999999999988653 3578899999875432 3456788999999999999999999988653 357899
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++.... +++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 87 ~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 161 (283)
T cd05080 87 MEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGH 161 (283)
T ss_pred ecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccccCCcc
Confidence 99999999999997653 899999999999999999995 5789999999999999999999999999998765432
Q ss_pred Ccc-eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC-CCcchhccccc
Q 005278 570 DSV-IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP-DGLTEVVDANL 647 (704)
Q Consensus 570 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 647 (704)
... ......++..|+|||......++.++||||||+++|||+||..|+............+...... ..+....+...
T Consensus 162 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
T cd05080 162 EYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGM 241 (283)
T ss_pred hhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCC
Confidence 211 1122345677999999988889999999999999999999999986532211111111000000 00111111111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
..+.+..++..+.+++..||+.+|++||+++++++.|+++.
T Consensus 242 -----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 242 -----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred -----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 11122345678999999999999999999999999999875
No 96
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.4e-37 Score=321.46 Aligned_cols=241 Identities=24% Similarity=0.308 Sum_probs=192.6
Q ss_pred ccccccCceEEEEEEE----CCCCEEEEEEeeccc----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 421 NLLGTGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+.||+|+||.||+++. .+++.||+|++.... ......+..|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999975 357899999987532 12334678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+++...+ .+.+..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 155 (323)
T cd05584 82 LSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT-- 155 (323)
T ss_pred CCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC--
Confidence 99999999997654 3678888889999999999995 57899999999999999999999999999875432221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...........
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~~~~-------------- 216 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKILKGK-------------- 216 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCC--------------
Confidence 12234689999999999988899999999999999999999999975321 11111111000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
...+..++..+.+++.+|++.+|++|| ++.++++
T Consensus 217 -~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 -LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 011123345678999999999999999 7777755
No 97
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-38 Score=325.18 Aligned_cols=245 Identities=24% Similarity=0.271 Sum_probs=203.2
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
....++|....+||+|.||+|+++..+ +++.+|||++++.. ..+.+....|.+++... +||.+++++.+|...++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 344578999999999999999999965 68899999998765 34567788899888887 59999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.+.||||+.||++..+ .+...+++..+.-++..|+.||.|| |+.+||+||||.+|||+|.+|++||+|||+++.-
T Consensus 444 l~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fL---H~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFL---HENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHH---HhcCceeeecchhheEEcccCcEEeccccccccc
Confidence 9999999999994333 3334589999999999999999999 6689999999999999999999999999999864
Q ss_pred CCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
--. ...++..+|||.|||||++.+..|+..+|-|||||+||||+.|..||.+..++ ++.|.
T Consensus 519 m~~--g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe-----------------e~Fds 579 (694)
T KOG0694|consen 519 MGQ--GDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE-----------------EVFDS 579 (694)
T ss_pred CCC--CCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH-----------------HHHHH
Confidence 322 22466789999999999999999999999999999999999999999863221 11111
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSM 682 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~ 682 (704)
-+.. ....|..++.+.+.++.+++..+|++|..+
T Consensus 580 I~~d---~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVND---EVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcC---CCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 1111 122344667888999999999999999976
No 98
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.5e-37 Score=316.79 Aligned_cols=255 Identities=27% Similarity=0.437 Sum_probs=204.0
Q ss_pred CCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.+|...+.||+|+||.||++... ++..+|+|.+..........+.+|+++++.++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46677889999999999999632 356899998876655566789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC--------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 489 VLEFMPNGSLEKWLYSHN--------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
+|||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCCCCE
Confidence 999999999999997543 24788999999999999999995 5789999999999999999999
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHh
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 633 (704)
||+|||++................+++.|+|||+..+..++.++|||||||++|||++ |..||......+ .......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~~ 239 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECITQ 239 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHHc
Confidence 9999999986643222222223345788999999998899999999999999999998 899986532211 1111000
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
+ .....+..++..+.+++.+||+.||.+||++.||.+.|++
T Consensus 240 ----~-------------~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 240 ----G-------------RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ----C-------------ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 0 0001112345678899999999999999999999998863
No 99
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.8e-37 Score=317.87 Aligned_cols=258 Identities=28% Similarity=0.429 Sum_probs=204.6
Q ss_pred CCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
+|.+.+.||+|+||.||+|+.. ....+|+|.+.... ......+.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677889999999999999743 23578899886543 2334678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhC-----------------------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 005278 489 VLEFMPNGSLEKWLYSH-----------------------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNN 545 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~-----------------------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~N 545 (704)
++||+++|+|.+++... ...+++..++.++.|++.|++||| +.+|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhhhe
Confidence 99999999999998642 124788999999999999999995 5789999999999
Q ss_pred eeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCcccccc
Q 005278 546 ILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGE 624 (704)
Q Consensus 546 il~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~ 624 (704)
|++++++.+||+|||+++...............++..|+|||...+..++.++||||||+++|||++ |..||.+....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 9999999999999999986543322222233356778999999888889999999999999999999 99998653211
Q ss_pred ccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 625 MSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
.+..+.... . ....+..++.++.+++..|++.+|++||+++|+++.|+++-.+
T Consensus 237 -~~~~~~~~~------------~-----~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~ 289 (290)
T cd05045 237 -RLFNLLKTG------------Y-----RMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK 289 (290)
T ss_pred -HHHHHHhCC------------C-----CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence 111111110 0 0011223456788999999999999999999999999987643
No 100
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-37 Score=319.55 Aligned_cols=261 Identities=25% Similarity=0.423 Sum_probs=208.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC--------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeee
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCN 482 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 482 (704)
..++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467888899999999999999741 24579999986543 33456789999999999 89999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 005278 483 IDFKALVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNIL 547 (704)
Q Consensus 483 ~~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil 547 (704)
....++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceEE
Confidence 999999999999999999997532 34788889999999999999995 578999999999999
Q ss_pred eCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCcccccccc
Q 005278 548 LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMS 626 (704)
Q Consensus 548 ~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~ 626 (704)
++.++.+||+|||+++.+.............+++.|+|||++.+..++.++||||||+++||+++ |..||....
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----- 244 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----- 244 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----
Confidence 99999999999999987754333222333456788999999988889999999999999999998 778876532
Q ss_pred HHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 627 LKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
...+..... .. .....+..++..+.+++..||+.+|++||++.|+++.|+++...
T Consensus 245 ~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 VEELFKLLK-EG-------------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HHHHHHHHH-cC-------------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 222221110 00 00011224566788999999999999999999999999987653
No 101
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.5e-37 Score=315.33 Aligned_cols=261 Identities=23% Similarity=0.372 Sum_probs=209.2
Q ss_pred HhCCCCccccccccCceEEEEEEECC-----CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeee-CCe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLFD-----GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCN-IDF 485 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 485 (704)
..++|...+.||+|+||.||+|...+ +..|++|++.... ......+.+|+.++++++||||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35678889999999999999998755 6889999886543 3345678899999999999999999998766 567
Q ss_pred EEEEEeccCCCCHHHHHhhCC-------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 486 KALVLEFMPNGSLEKWLYSHN-------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
.++++||+++|+|.+++.... ..+++..+..++.+++.|++||| +.+++||||||+||++++++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEECC
Confidence 899999999999999997532 45889999999999999999995 57899999999999999999999999
Q ss_pred eccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCC
Q 005278 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPD 637 (704)
Q Consensus 559 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 637 (704)
||+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.||..... ..+..+......
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~- 237 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYR- 237 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCC-
Confidence 999986644332222223346778999999988889999999999999999999 9999976321 222222221110
Q ss_pred CcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 638 GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
......++.++.+++.+||+.+|++||++.|+++.|+.+.++
T Consensus 238 ----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 ----------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred ----------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 011123456788999999999999999999999999998764
No 102
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.5e-37 Score=327.60 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=203.9
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 485 (704)
.++|.+.+.||+|+||.||+|++. .+..||+|++.... ......+.+|++++.++. ||||+++++++...+.
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~ 115 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP 115 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence 346778899999999999999853 34689999997543 223456889999999997 9999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-----------------------------------------------------------
Q 005278 486 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 506 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~----------------------------------------------------------- 506 (704)
.++|+||+++|+|.+++++.+
T Consensus 116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (401)
T cd05107 116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM 195 (401)
T ss_pred cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence 999999999999999997432
Q ss_pred --------------------------------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 005278 507 --------------------------------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL 548 (704)
Q Consensus 507 --------------------------------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~ 548 (704)
..+++.....++.|++.|++|| |+.+|+||||||+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L---H~~~ivHrdlkp~NiLl 272 (401)
T cd05107 196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFL---ASKNCVHRDLAARNVLI 272 (401)
T ss_pred hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCcCcccCCcceEEE
Confidence 1356777889999999999999 56789999999999999
Q ss_pred CCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 549 DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 549 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
++++.+|++|||+++...............+++.|+|||.+.+..++.++|||||||++|||++ |+.||......+. .
T Consensus 273 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~-~ 351 (401)
T cd05107 273 CEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ-F 351 (401)
T ss_pred eCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH-H
Confidence 9999999999999987543222112223457889999999988889999999999999999998 8899865321111 0
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
...+. .+ . ....+..++..+.+++.+||+.+|.+||+++|+++.|+++.
T Consensus 352 ~~~~~----~~--------~-----~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 352 YNAIK----RG--------Y-----RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHHH----cC--------C-----CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 01000 00 0 01112234567889999999999999999999999998763
No 103
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-37 Score=339.73 Aligned_cols=256 Identities=25% Similarity=0.307 Sum_probs=204.4
Q ss_pred HHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC---
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID--- 484 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 484 (704)
....++|.+.+.||+|+||+||+|+. .+|+.||||++.... ......+.+|+..+..++|+||+++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457999999999999999999984 479999999986542 334456889999999999999999988765432
Q ss_pred -----eEEEEEeccCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 005278 485 -----FKALVLEFMPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHV 556 (704)
Q Consensus 485 -----~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl 556 (704)
..++||||+++|+|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~l---H~~~IiHrDLKP~NILl~~~~~vkL 184 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHV---HSKHMIHRDIKSANILLCSNGLVKL 184 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCEecCCCCHHHEEEeCCCCEEE
Confidence 367999999999999999743 34588999999999999999999 5678999999999999999999999
Q ss_pred eeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC
Q 005278 557 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP 636 (704)
Q Consensus 557 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 636 (704)
+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ...+......
T Consensus 185 ~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~~ 259 (496)
T PTZ00283 185 GDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTLA 259 (496)
T ss_pred EecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHhc
Confidence 99999987654322222334579999999999999999999999999999999999999996521 2222221111
Q ss_pred CCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 637 DGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
... ...+..++.++.+++..||+.+|++||++.++++.
T Consensus 260 ~~~--------------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 260 GRY--------------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCC--------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 100 01122345678899999999999999999999764
No 104
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.4e-37 Score=318.35 Aligned_cols=264 Identities=22% Similarity=0.369 Sum_probs=206.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF 485 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 485 (704)
..++|++.+.||+|+||.||+|... .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4578999999999999999999743 24579999876443 2234467889999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC---------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 005278 486 KALVLEFMPNGSLEKWLYSHN---------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHV 556 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl 556 (704)
.++||||+++|+|.+++.... ...++..+..++.|++.|+.|| |+++|+||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHH---HhCCCcCCCCChheEEEcCCCcEEE
Confidence 999999999999999997421 2346678889999999999999 5678999999999999999999999
Q ss_pred eeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhc
Q 005278 557 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 557 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||..... ..+.....
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVLKFVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHH
Confidence 99999986543332222223345778999999988899999999999999999999 7888865321 11111111
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhh
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLD 698 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 698 (704)
... . ...+..++..+.+++.+|++.+|++||++.|+++.|++....+.+
T Consensus 236 ~~~--------~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~ 284 (288)
T cd05061 236 DGG--------Y------LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP 284 (288)
T ss_pred cCC--------C------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence 000 0 011123356788999999999999999999999999886544433
No 105
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=5.4e-37 Score=314.53 Aligned_cols=265 Identities=23% Similarity=0.304 Sum_probs=194.8
Q ss_pred CCCCccccccccCceEEEEEEEC--CCCEEEEEEeeccch--hhhHHHHHHHHHHHhc---CCCCCceEEeeeee-----
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQLE--RASRSFDSECEILRSI---RHRNLIKIISNCCN----- 482 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~----- 482 (704)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36888999999999999999853 468899999875432 2234566777777766 69999999998852
Q ss_pred CCeEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 483 IDFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 483 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
....++||||++ ++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l---H~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL---HSHRVVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence 446889999996 6999998753 34588999999999999999999 557899999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc---CCC
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL---PDG 638 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~ 638 (704)
++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+........ +..
T Consensus 157 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~ 232 (290)
T cd07862 157 ARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 232 (290)
T ss_pred eEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhh
Confidence 9876432 22334568999999999988889999999999999999999999997632211 1111111100 000
Q ss_pred cchhc---cccchhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 LTEVV---DANLVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 ~~~~~---~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.... ...+.... .......+.+..+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 233 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred chhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00000 00000000 000111234566789999999999999999999974
No 106
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=9.4e-38 Score=326.03 Aligned_cols=252 Identities=21% Similarity=0.269 Sum_probs=201.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|...+.||+|+||+||+|+.. +++.||+|+++.... ...+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999854 689999999975432 23456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++..+.....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~l---H~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~ 157 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSV---HQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM 157 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc
Confidence 99999999999987766789999999999999999999 557899999999999999999999999999987654322
Q ss_pred cceeccccccccccCCcccC------CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 571 SVIQTMTIATIGYMAPEYGS------EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
. ......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ...........
T Consensus 158 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~------ 225 (330)
T cd05601 158 V-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKTYNNIMNFQ------ 225 (330)
T ss_pred e-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHHHHHHHcCC------
Confidence 1 223346899999999876 45678899999999999999999999965221 11111110000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ...+.....+..+.+++..|++ +|++||++.++++
T Consensus 226 -~~----~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 226 -RF----LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred -Cc----cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 00 0001111234567889999998 9999999999864
No 107
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2.9e-37 Score=325.10 Aligned_cols=248 Identities=25% Similarity=0.323 Sum_probs=192.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|+||+++++++...+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 35566789999999999999854 68999999986543 23446789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+.. ...+..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.+.....
T Consensus 154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~-- 223 (353)
T PLN00034 154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD-- 223 (353)
T ss_pred CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc--
Confidence 9999986532 2456778889999999999995 57899999999999999999999999999987643221
Q ss_pred eeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 573 IQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
......||..|+|||++.. ...+.++|||||||++|||++|+.||..... ..+..........
T Consensus 224 ~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~---------- 291 (353)
T PLN00034 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMS---------- 291 (353)
T ss_pred cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhcc----------
Confidence 1233468999999998743 3345689999999999999999999973211 1111111100000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....+..++.++.+++.+||+.||++||++.|+++.
T Consensus 292 ----~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 292 ----QPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ----CCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0011122345678899999999999999999999763
No 108
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=5.8e-37 Score=311.44 Aligned_cols=254 Identities=28% Similarity=0.479 Sum_probs=201.3
Q ss_pred CCccccccccCceEEEEEEEC-C---CCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe-----
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-D---GTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF----- 485 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~---~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 485 (704)
|...+.||+|+||.||+|... + +..||+|.++... ......+.+|++.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 456789999999999999864 2 3679999987543 2334678999999999999999999998866544
Q ss_pred -EEEEEeccCCCCHHHHHhhC-----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 486 -KALVLEFMPNGSLEKWLYSH-----NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 486 -~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
.++++||+++|+|.+++... ...+++.....++.|++.|++||| +.+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECCc
Confidence 78999999999999998632 235889999999999999999995 578999999999999999999999999
Q ss_pred ccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCC
Q 005278 560 GISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 560 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
|+++.+.............++..|+|||++.+..++.++|||||||++|||++ |..||.+.... ....+.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--- 232 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGN--- 232 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC---
Confidence 99987654433222233345778999999988899999999999999999999 88888663221 1111111100
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
....+..++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 233 --------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 --------------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --------------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111224456789999999999999999999999999875
No 109
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.2e-37 Score=319.88 Aligned_cols=263 Identities=25% Similarity=0.411 Sum_probs=207.9
Q ss_pred hCCCCccccccccCceEEEEEEEC--------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
.++|.+.+.||+|+||.||+|+.. ++..+|+|.+.... ......+..|+++++.+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357889999999999999999742 23569999987543 33445688899999999 799999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL 548 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~ 548 (704)
+..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHheEE
Confidence 99999999999999999997532 24788999999999999999995 5789999999999999
Q ss_pred CCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 549 DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 549 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
+.++.+||+|||.++...............+++.|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-----~ 248 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----V 248 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-----H
Confidence 9999999999999986643222111222234578999999988889999999999999999998 888886532 1
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhh
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLD 698 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 698 (704)
........ .. .....+..++.++.+++.+|++.+|++||++.||++.|+++.+....
T Consensus 249 ~~~~~~~~-~~-------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~~ 305 (307)
T cd05098 249 EELFKLLK-EG-------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTSN 305 (307)
T ss_pred HHHHHHHH-cC-------------CCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhhc
Confidence 11111110 00 00111224456788999999999999999999999999998776543
No 110
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-37 Score=328.53 Aligned_cols=253 Identities=23% Similarity=0.332 Sum_probs=203.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|...+.||+|+||+||+|+.. +++.||+|++.... ......+..|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47888999999999999999965 68999999987543 134457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC-
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD- 569 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~- 569 (704)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~ 156 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKD 156 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCc
Confidence 999999999999876 45889999999999999999995 5889999999999999999999999999998764432
Q ss_pred --------------------------CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccc
Q 005278 570 --------------------------DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG 623 (704)
Q Consensus 570 --------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~ 623 (704)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~ 236 (350)
T cd05573 157 REYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ 236 (350)
T ss_pred ccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH
Confidence 001123346899999999999999999999999999999999999999763211
Q ss_pred cccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-HHHHHHH
Q 005278 624 EMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS-MKDAAAK 688 (704)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-~~ev~~~ 688 (704)
..+.. ... .. ... ..+....++..+.+++..|++ +|++||+ ++|+++.
T Consensus 237 ----~~~~~-i~~-~~-----~~~-----~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 237 ----ETYNK-IIN-WK-----ESL-----RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred ----HHHHH-Hhc-cC-----Ccc-----cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11110 000 00 000 000111135678889999997 9999999 9999764
No 111
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.6e-37 Score=316.67 Aligned_cols=259 Identities=26% Similarity=0.444 Sum_probs=204.2
Q ss_pred CCCCccccccccCceEEEEEEECC-CC--EEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-GT--NVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 489 (704)
++|+..+.||+|+||.||+|...+ +. .+++|.++... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 578889999999999999998653 33 47888876432 33446788999999999 799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 490 LEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
+||+++|+|.+++.+.. ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCCeE
Confidence 99999999999997532 24788999999999999999995 5789999999999999999999
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHh
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~ 633 (704)
||+|||++...... ........+..|+|||+..+..++.++|||||||++|||++ |..||..... ..+...
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----~~~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----AELYEK 230 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHH
Confidence 99999998643211 11112233567999999988889999999999999999998 9999865321 111111
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhh
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLD 698 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~ 698 (704)
. ..+. ....+..++..+.+++..||+.+|.+||++.++++.|+.+.+++..
T Consensus 231 ~-~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 231 L-PQGY-------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred H-hcCC-------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1 0100 0011123456788999999999999999999999999998876644
No 112
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.6e-37 Score=327.55 Aligned_cols=253 Identities=21% Similarity=0.281 Sum_probs=195.0
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.|+..+.||+|+||+||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999985 468999999997542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC-
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD- 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~- 570 (704)
|+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~L---H~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 82 YIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESV---HKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 999999999997654 378888899999999999999 567899999999999999999999999999764321000
Q ss_pred --------------------------------------------cceeccccccccccCCcccCCCCCCcccceeeHHHH
Q 005278 571 --------------------------------------------SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGIL 606 (704)
Q Consensus 571 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~ 606 (704)
........||+.|+|||++.+..++.++|||||||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000112469999999999998889999999999999
Q ss_pred HHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhh--hcCCCCCCCCCHHH
Q 005278 607 LMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALD--CCMESPEQRVSMKD 684 (704)
Q Consensus 607 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~~P~~Rpt~~e 684 (704)
+|||+||+.||......+. ...... ... .. ..+....++.++.+++.+ |+..+|..||++.|
T Consensus 238 l~elltG~~Pf~~~~~~~~-~~~i~~---~~~-------~~-----~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~ 301 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTET-QLKVIN---WEN-------TL-----HIPPQVKLSPEAVDLITKLCCSAEERLGRNGADD 301 (381)
T ss_pred HHHHHhCCCCCcCCCHHHH-HHHHHc---ccc-------cc-----CCCCCCCCCHHHHHHHHHHccCcccccCCCCHHH
Confidence 9999999999976322111 000000 000 00 000111234566778877 55667777999999
Q ss_pred HHHH
Q 005278 685 AAAK 688 (704)
Q Consensus 685 v~~~ 688 (704)
+++.
T Consensus 302 ~l~h 305 (381)
T cd05626 302 IKAH 305 (381)
T ss_pred HhcC
Confidence 9753
No 113
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=6.8e-37 Score=310.13 Aligned_cols=256 Identities=27% Similarity=0.469 Sum_probs=204.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CC---CEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DG---TNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
.+|...+.||+|+||.||+|... ++ ..||||.+.... ......+..|+.++++++||||+++++++.+....++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 35677889999999999999864 33 369999987543 33456799999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++......+++..++.++.|++.|++||| +.+++||||||+||+++.++.++++|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 9999999999999876667899999999999999999995 5789999999999999999999999999988664432
Q ss_pred Ccceecccc---ccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 570 DSVIQTMTI---ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 570 ~~~~~~~~~---gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
......... .+..|+|||+..+..++.++|||||||++||+++ |..||..... .....++....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~---------- 228 (269)
T cd05065 161 SDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDY---------- 228 (269)
T ss_pred cccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCC----------
Confidence 211111111 2457999999998899999999999999999887 9999865321 11222221100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+.+.+++..+.+++..||+.+|++||++.+|++.|+++
T Consensus 229 -------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 -------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred -------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111224566788999999999999999999999998865
No 114
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=5.5e-37 Score=309.30 Aligned_cols=254 Identities=27% Similarity=0.455 Sum_probs=203.5
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|+..++||+|+||.||+|+..++..||+|.+.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 35688899999999999999998777789999987532 234578999999999999999999998754 5578999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++.+. ...+++..+..++.+++.|++|| |+.+++||||||+||++++++.++|+|||.++.+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~l---H~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 83 SKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV---ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred CCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHH---HHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 999999999854 34578999999999999999999 5678999999999999999999999999999876543321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||+..+..++.++||||||+++||++| |..||......+ ..... ....
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~-----~~~~~-~~~~------------ 220 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE-----VLDQV-ERGY------------ 220 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH-----HHHHH-hcCC------------
Confidence 1223346778999999988889999999999999999999 788886532111 00100 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
......+++..+.+++.+|++.+|++||++.++.+.|++.
T Consensus 221 -~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011224566788999999999999999999999998864
No 115
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.8e-37 Score=312.60 Aligned_cols=253 Identities=28% Similarity=0.484 Sum_probs=196.9
Q ss_pred CccccccccCceEEEEEEECC-CC--EEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC------CeE
Q 005278 418 NECNLLGTGSFGSVYKGTLFD-GT--NVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI------DFK 486 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~-~~--~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 486 (704)
.+.+.||+|+||.||+|+..+ ++ .+|+|.++... ....+.+..|+++++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999998654 33 68999886542 33456788999999999999999999987432 246
Q ss_pred EEEEeccCCCCHHHHHhh-----CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 487 ALVLEFMPNGSLEKWLYS-----HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
++++||+++|+|.+++.. ....+++.....++.|++.|++||| +.+|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999998852 2234789999999999999999995 57899999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcc
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLT 640 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (704)
++.+.............+++.|+|||+..+..++.++||||||+++|||++ |+.||...... ....... .+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~----~~-- 230 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLR----QG-- 230 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH----cC--
Confidence 987654332222233356778999999999899999999999999999999 78898653211 1111111 00
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.....+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 231 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 -----------NRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred -----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 00011123456688999999999999999999999999874
No 116
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=299.33 Aligned_cols=268 Identities=24% Similarity=0.283 Sum_probs=202.8
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeec--cchhhhHHHHHHHHHHHhcCCCCCceEEeeeee-----CC
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNL--QLERASRSFDSECEILRSIRHRNLIKIISNCCN-----ID 484 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 484 (704)
....|...+.||+|+||.|+.|.. .+|+.||+|++.. ......++..+|+..++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 345666678999999999999985 4799999999873 334556778899999999999999999998865 34
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
..|+|+|+| +.+|.+.++.+.. +......-++.|+..|++|+ |+.+|+|||+||+|++++.+...||+|||+|+.
T Consensus 100 DvYiV~elM-etDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyi---HSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~ 174 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYI---HSANVIHRDLKPSNLLLNADCDLKICDFGLARY 174 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchh---hcccccccccchhheeeccCCCEEeccccceee
Confidence 689999999 4599999886643 78888899999999999999 778899999999999999999999999999998
Q ss_pred cCCCCCcceeccccccccccCCccc-CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC----c
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG----L 639 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~ 639 (704)
..........+..+.|..|.|||++ ....|+...||||.||++.||++|+.-|.+... ...-..+....... +
T Consensus 175 ~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~--v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 175 LDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDY--VHQLQLILELLGTPSEEDL 252 (359)
T ss_pred ccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCch--HHHHHHHHHhcCCCCHHHH
Confidence 8654333344666789999999975 567899999999999999999999998876211 11111111111110 0
Q ss_pred chhcc-------ccchhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 TEVVD-------ANLVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 ~~~~~-------~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+-. .++.... +-........+..++++.+|+..||.+|+|++|+++
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11100 0000000 001111234567889999999999999999999964
No 117
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-37 Score=315.44 Aligned_cols=256 Identities=25% Similarity=0.404 Sum_probs=202.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF 485 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 485 (704)
.+++|...+.||+|+||.||+|... .+..||+|.+.... ......+..|+.+++.++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3567888999999999999999864 35678999876443 2334568899999999999999999999999888
Q ss_pred EEEEEeccCCCCHHHHHhhCC------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEE
Q 005278 486 KALVLEFMPNGSLEKWLYSHN------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM---TAHV 556 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~---~~kl 556 (704)
.++||||+++|+|.+++...+ ..+++..+..++.|++.|++||| +.+++||||||+||+++.++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceEe
Confidence 999999999999999997543 25889999999999999999995 57899999999999998654 5999
Q ss_pred eeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhc
Q 005278 557 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 557 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
+|||+++.+..............+..|+|||++.+..++.++|||||||++|||++ |..||......+ ....+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~--~~~~~~~-- 236 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQE--VMEFVTG-- 236 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH--HHHHHHc--
Confidence 99999987643222211222334578999999998899999999999999999997 999987532211 1111110
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. ....+..++..+.+++.+|++.+|++||++.+|++.|.
T Consensus 237 -~~--------------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 237 -GG--------------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -CC--------------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00 00112234567889999999999999999999999875
No 118
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-37 Score=318.94 Aligned_cols=265 Identities=24% Similarity=0.429 Sum_probs=208.0
Q ss_pred hCCCCccccccccCceEEEEEEEC--------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
.++|...+.||+|+||.||+|+.. .+..+|+|.+.... ......+..|+.+++++ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357888899999999999999742 24579999987543 23345688999999999 699999999999998
Q ss_pred CeEEEEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL 548 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~ 548 (704)
+..++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeEEE
Confidence 89999999999999999997532 34788999999999999999995 5789999999999999
Q ss_pred CCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 549 DENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 549 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
+.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||...... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~--~~ 245 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVE--EL 245 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 9999999999999987643322221222234568999999988889999999999999999999 88888653211 11
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhhhh
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDV 700 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~ 700 (704)
..... .. .....+..++.++.+++.+|++.+|++||++.|+++.|+++......+.
T Consensus 246 ~~~~~----~~-------------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~ 301 (314)
T cd05099 246 FKLLR----EG-------------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEY 301 (314)
T ss_pred HHHHH----cC-------------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCc
Confidence 11111 00 0001122345678899999999999999999999999999987655543
No 119
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.1e-37 Score=308.52 Aligned_cols=248 Identities=27% Similarity=0.460 Sum_probs=196.5
Q ss_pred cccccCceEEEEEEEC---CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCC
Q 005278 422 LLGTGSFGSVYKGTLF---DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 497 (704)
.||+|+||.||+|.+. ++..||+|++..... ...+.+.+|+.++++++||||+++++++. .+..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999753 355799999865532 33467899999999999999999999875 456789999999999
Q ss_pred HHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc-eecc
Q 005278 498 LEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQTM 576 (704)
Q Consensus 498 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~-~~~~ 576 (704)
|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++.......... ....
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 157 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA 157 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence 99999876667899999999999999999994 5789999999999999999999999999998654332211 1122
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
..++..|+|||.+....++.++|||||||++||+++ |..||...... .....+.... ...
T Consensus 158 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~-----------------~~~ 218 (257)
T cd05115 158 GKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGK-----------------RLD 218 (257)
T ss_pred CCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCC-----------------CCC
Confidence 234678999999888889999999999999999996 99999764221 1111111100 011
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.+..++.++.+++..||+.+|++||++.+|.+.|+.+
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 1224467788999999999999999999999998764
No 120
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.9e-37 Score=307.06 Aligned_cols=247 Identities=32% Similarity=0.478 Sum_probs=199.4
Q ss_pred ccccccCceEEEEEEECCCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHH
Q 005278 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLE 499 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 499 (704)
++||+|+||.||+|...+++.+|+|.+..... .....+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 36899999999999988899999999875432 33456889999999999999999999999999999999999999999
Q ss_pred HHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccc
Q 005278 500 KWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579 (704)
Q Consensus 500 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g 579 (704)
+++......+++..+..++.+++.++.|+ |+.+++||||+|+||+++.++.+|++|||++......... ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~~ 156 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQI 156 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCCCC
Confidence 99986666689999999999999999999 5678999999999999999999999999999765332211 1122245
Q ss_pred cccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
+..|+|||+..+..++.++||||||+++||+++ |..||....... ...... ... ....+.
T Consensus 157 ~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~--~~~~~~----~~~-------------~~~~~~ 217 (250)
T cd05085 157 PIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ--AREQVE----KGY-------------RMSCPQ 217 (250)
T ss_pred cccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH--HHHHHH----cCC-------------CCCCCC
Confidence 678999999998899999999999999999998 999986532111 111111 000 001111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.++..+.+++.+|++.+|++||++.|++++|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 34567889999999999999999999999875
No 121
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=4.5e-37 Score=316.40 Aligned_cols=258 Identities=24% Similarity=0.398 Sum_probs=205.0
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
.++|...+.||+|+||.||+|... ++..||||.++... ....+.+.+|+.+++++ +||||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 357888899999999999999742 35579999887543 33346789999999999 79999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 486 KALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
.++||||+++|+|.+++.... ..+++..+..++.+++.|++||| +.+|+|+||||+||+++.++.++++|||+++.
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~ 190 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGLARD 190 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCccccc
Confidence 999999999999999997543 34899999999999999999995 57899999999999999999999999999986
Q ss_pred cCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
..............++..|+|||.+.+..++.++|||||||++|||++ |..||......+ ........ ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~----~~---- 261 (302)
T cd05055 191 IMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKE----GY---- 261 (302)
T ss_pred ccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHc----CC----
Confidence 644322222223346788999999998889999999999999999998 999987643211 11111110 00
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
. ...+...+..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 262 ----~-----~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 262 ----R-----MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred ----c-----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 0 001112245688999999999999999999999999874
No 122
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5.9e-37 Score=341.47 Aligned_cols=260 Identities=22% Similarity=0.295 Sum_probs=204.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|++.++||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999864 68999999987542 223457899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC----------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeec
Q 005278 491 EFMPNGSLEKWLYSH----------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560 (704)
Q Consensus 491 e~~~~gsL~~~l~~~----------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 560 (704)
||+++|+|.+++... ....++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 999999999998631 123566778899999999999995 5789999999999999999999999999
Q ss_pred cceecCCCCC----------------cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccc
Q 005278 561 ISKLLGEGDD----------------SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGE 624 (704)
Q Consensus 561 la~~~~~~~~----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~ 624 (704)
++........ ........||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9987621110 001122468999999999999999999999999999999999999997622211
Q ss_pred ccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-CHHHHHHHHHHhHH
Q 005278 625 MSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRV-SMKDAAAKLKKIKE 694 (704)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-t~~ev~~~L~~~~~ 694 (704)
..... .. .++ .......+.+..+.+++.+|++.||++|| +++++.+.|+.+.+
T Consensus 239 i~~~~----~i-------~~P------~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYRD----VI-------LSP------IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhh----hc-------cCh------hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11000 00 000 00011123456788999999999999996 57778888877654
No 123
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=8e-37 Score=314.32 Aligned_cols=262 Identities=26% Similarity=0.376 Sum_probs=204.8
Q ss_pred hCCCCccccccccCceEEEEEEECC-----------------CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCce
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD-----------------GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIK 475 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 475 (704)
..+|+..+.||+|+||.||+|+..+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578899999999999999987542 2458999987554 234567899999999999999999
Q ss_pred EEeeeeeCCeEEEEEeccCCCCHHHHHhhCC----------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 005278 476 IISNCCNIDFKALVLEFMPNGSLEKWLYSHN----------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNN 545 (704)
Q Consensus 476 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~N 545 (704)
+++++...+..++++||+++++|.+++.... ..+++..++.++.|++.|++||| +.+|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccchhc
Confidence 9999999999999999999999999997543 25899999999999999999995 5789999999999
Q ss_pred eeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh--CCCCCCccccc
Q 005278 546 ILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT--RKKPTNEIFIG 623 (704)
Q Consensus 546 il~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t--g~~p~~~~~~~ 623 (704)
|+++.++.++|+|||+++...............+++.|+|||+..+..++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ 240 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH
Confidence 9999999999999999987644333233334456789999999988889999999999999999998 66777653211
Q ss_pred cccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 624 EMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
+ ............... .....+..++.++.+++.+|++.+|++||++.||++.|+
T Consensus 241 ~--~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 241 Q--VIENAGHFFRDDGRQ----------IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred H--HHHHHHhcccccccc----------ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1 111111100000000 000111234567899999999999999999999999886
No 124
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-36 Score=308.30 Aligned_cols=258 Identities=23% Similarity=0.315 Sum_probs=207.3
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+|+. .+++.+|||.+.... ......+.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999985 579999999876432 223457889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
||+++++|.+++.. ....+++..++.++.+++.|++|| |+.+++|+||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHM---HSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999998863 234589999999999999999999 567899999999999999999999999999887643
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
... ......++..|+|||+..+..++.++||||||+++|||++|..||...... ...+.+.... ...+.
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~-----~~~~~- 227 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQ-----CDYPP- 227 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhhc-----CCCCC-
Confidence 322 122346889999999998888999999999999999999999998653221 1111111000 00000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.....++..+.+++.+||+.+|++||||.+|+++++++.
T Consensus 228 -------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 -------LPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred -------CCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 011234567889999999999999999999999998863
No 125
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.9e-37 Score=327.02 Aligned_cols=252 Identities=21% Similarity=0.314 Sum_probs=197.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||+||+|+.. +++.||||++.... ......+.+|+++++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999864 68999999997542 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||++..+.....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 156 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHR 156 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccccc
Confidence 9999999999997654 4889999999999999999995 57899999999999999999999999999876532211
Q ss_pred cc------------------------------------eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCC
Q 005278 571 SV------------------------------------IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK 614 (704)
Q Consensus 571 ~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~ 614 (704)
.. ......||+.|+|||++.+..++.++|||||||++|||++|.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~ 236 (364)
T cd05599 157 TEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGY 236 (364)
T ss_pred ccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCC
Confidence 00 011235899999999999999999999999999999999999
Q ss_pred CCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC---HHHHHH
Q 005278 615 KPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS---MKDAAA 687 (704)
Q Consensus 615 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt---~~ev~~ 687 (704)
.||...... ........ .. ..+ ..+.....+..+.+++..|+. +|.+|++ +.|+++
T Consensus 237 ~Pf~~~~~~-----~~~~~i~~-~~-----~~~-----~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 237 PPFCSDNPQ-----ETYRKIIN-WK-----ETL-----QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCHH-----HHHHHHHc-CC-----Ccc-----CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 999753211 11110000 00 000 000001234567788999986 9999998 888865
No 126
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.3e-36 Score=322.45 Aligned_cols=262 Identities=21% Similarity=0.231 Sum_probs=197.1
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+|++.+.||+|+||.||+|.. .+++.||+|... ...+.+|++++++++||||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 36899999999999999999985 468999999743 23567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+. ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+....... .
T Consensus 165 ~~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~ 238 (391)
T PHA03212 165 YK-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-N 238 (391)
T ss_pred CC-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-c
Confidence 95 68988887543 4789999999999999999995 57899999999999999999999999999975432211 1
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccc------cccHHHHHHhhc--CCCc----c
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG------EMSLKHWVKESL--PDGL----T 640 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~------~~~~~~~~~~~~--~~~~----~ 640 (704)
......||+.|+|||++.+..++.++|||||||++|||++|+.||-..... ...+...+.... +..+ .
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 123356999999999999999999999999999999999999886432110 111111111100 0000 0
Q ss_pred hhccccc-------h---hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 EVVDANL-------V---REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 ~~~~~~~-------~---~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..+ . ...+........+.++.+++.+|++.||++|||++|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000 0 000001112234667889999999999999999999964
No 127
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.5e-37 Score=318.48 Aligned_cols=246 Identities=19% Similarity=0.264 Sum_probs=194.0
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..+++++ +||||+++++++.+....++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36899999999999864 68999999997543 22335678899999998 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++...+ .+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--DTTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEECcCccccccccCC--Cccc
Confidence 99999887553 489999999999999999999 56789999999999999999999999999987532211 1123
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccc---cccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG---EMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+..... ......+.........
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------------- 221 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ------------- 221 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC-------------
Confidence 356899999999999999999999999999999999999999743211 1112222221111110
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCC------HHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVS------MKDAA 686 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt------~~ev~ 686 (704)
...+..++..+.+++.+|++.||++||+ +.|++
T Consensus 222 -~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 222 -IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 0111233556788999999999999997 55664
No 128
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5e-37 Score=308.83 Aligned_cols=247 Identities=25% Similarity=0.409 Sum_probs=196.2
Q ss_pred cccccCceEEEEEEE---CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 422 LLGTGSFGSVYKGTL---FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
.||+|+||.||+|.+ .++..+|+|+++... ....+.+..|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 589999999999975 357889999986443 2335678899999999999999999998754 5668999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc-eec
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-IQT 575 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~-~~~ 575 (704)
+|.+++.... .+++..+..++.|++.|++||| +++|+||||||+||+++.++.+||+|||++..+....... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKT 156 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecC
Confidence 9999997554 4889999999999999999995 5789999999999999999999999999998765432211 112
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
...++..|+|||.+....++.++|||||||++|||++ |+.||...... ...+.+.... ..
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~i~~~~-----------------~~ 217 (257)
T cd05116 157 HGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN--EVTQMIESGE-----------------RM 217 (257)
T ss_pred CCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHCCC-----------------CC
Confidence 2234678999999888889999999999999999998 99999763221 1122211100 01
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+..++.++.+++.+||+.||++||++.+|++.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 11223456788999999999999999999999999764
No 129
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=4.1e-37 Score=320.08 Aligned_cols=244 Identities=23% Similarity=0.261 Sum_probs=192.0
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHH---HhcCCCCCceEEeeeeeCCeEEEE
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEIL---RSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567789999999999999854 68999999987542 22334566676665 456799999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|..++... .+++..+..++.|++.|++|| |+.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~l---H~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYL---HENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG 155 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC
Confidence 9999999999888653 489999999999999999999 56789999999999999999999999999987542221
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
.......|++.|+|||++.+..++.++|||||||++|||++|+.||.+... ...........
T Consensus 156 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~~~i~~~~----------- 217 (324)
T cd05589 156 --DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVFDSIVNDE----------- 217 (324)
T ss_pred --CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC-----------
Confidence 122345689999999999999999999999999999999999999975321 11111110000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
...+..++..+.+++.+|++.||++||+ +.++++
T Consensus 218 ----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 ----VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 0111234566788999999999999994 555543
No 130
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=8.4e-37 Score=311.98 Aligned_cols=260 Identities=24% Similarity=0.412 Sum_probs=203.8
Q ss_pred CCCccccccccCceEEEEEEE-----CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-----FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 487 (704)
-|.+.+.||+|+||.||+++. .++..||+|.++... ....+.+.+|++++++++||||+++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467788999999999999974 357889999986543 33446789999999999999999999998775 5688
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||+++++|.+++.+....+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||+++.+..
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~ 161 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIET 161 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCcccccccc
Confidence 999999999999999876556899999999999999999994 67899999999999999999999999999987644
Q ss_pred CCCc-ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccc----------ccccHHHHHHhhcC
Q 005278 568 GDDS-VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFI----------GEMSLKHWVKESLP 636 (704)
Q Consensus 568 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~----------~~~~~~~~~~~~~~ 636 (704)
.... .......++..|+|||+..+..++.++|||||||++||++|++.|+..... ++.....+....
T Consensus 162 ~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 239 (284)
T cd05079 162 DKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVL-- 239 (284)
T ss_pred CccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHH--
Confidence 3221 112234567789999998888899999999999999999998776533111 011111111100
Q ss_pred CCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 637 DGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
. .....+.+..++..+.+++.+|++.+|++||++.|+++.++++
T Consensus 240 -------~-----~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 240 -------E-----EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -------H-----cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0 0001112234567899999999999999999999999999875
No 131
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.8e-37 Score=321.41 Aligned_cols=243 Identities=21% Similarity=0.248 Sum_probs=194.2
Q ss_pred ccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+.||+|+||.||+++. .+|+.||+|++.... ......+..|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3689999999999985 478999999997543 223456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+|.+++.... .+++..+..++.|++.||+|||. ..+|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~ 155 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMKT 155 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--cccc
Confidence 9999887554 48899999999999999999953 26899999999999999999999999999875432211 1223
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSV 656 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (704)
..||+.|+|||++.+..++.++|||||||++|||+||+.||..... ........... ...
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~-----~~~~~~i~~~~---------------~~~ 215 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEE---------------IRF 215 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH-----HHHHHHHhcCC---------------CCC
Confidence 4699999999999998999999999999999999999999965321 11111100000 001
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 005278 657 KIDCLLSIMHLALDCCMESPEQRV-----SMKDAAAK 688 (704)
Q Consensus 657 ~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~~ 688 (704)
+...+.++.+++.+|++.||++|+ ++.++++.
T Consensus 216 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 216 PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 112345678899999999999997 88888653
No 132
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=5.9e-37 Score=310.18 Aligned_cols=256 Identities=27% Similarity=0.464 Sum_probs=205.3
Q ss_pred CCCCccccccccCceEEEEEEEC-C---CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-D---GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
.+|.+.+.||+|+||.||+|+.. + +..+|+|.++... ....+.+..|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999853 2 3479999886543 23456789999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++......+++..+..++.|++.|++|| |+.+++||||||+||+++.++.++++|||++..+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999999999987666689999999999999999999 56789999999999999999999999999998765432
Q ss_pred Ccce-eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 570 DSVI-QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 570 ~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
.... .....++..|+|||++.+..++.++||||||+++||+++ |..||...... ....++....
T Consensus 161 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~------------ 226 (267)
T cd05066 161 EAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGY------------ 226 (267)
T ss_pred ceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCC------------
Confidence 2111 112234568999999998889999999999999999887 99998653221 1112111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
..+....++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 -----RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011123456788999999999999999999999999875
No 133
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=9e-37 Score=317.68 Aligned_cols=242 Identities=19% Similarity=0.261 Sum_probs=190.5
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999864 68899999987542 22345577888888877 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TTS 154 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--ccc
Confidence 99999887553 4889999999999999999995 57899999999999999999999999999875422111 123
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccc---ccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGE---MSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+........
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~-------------- 220 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-------------- 220 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--------------
Confidence 4568999999999999999999999999999999999999996422111 11112221111110
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSM 682 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~ 682 (704)
....+...+..+.+++.+|++.||++||++
T Consensus 221 ~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 221 QIRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred CCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 001122345567889999999999999984
No 134
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=3.9e-37 Score=322.95 Aligned_cols=266 Identities=22% Similarity=0.285 Sum_probs=194.9
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC-----CeEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI-----DFKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 487 (704)
+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999854 68999999986432 22345688999999999999999999987543 2479
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||+. ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 155 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARVAFN 155 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCcccccccc
Confidence 9999995 68999887554 4889999999999999999995 57899999999999999999999999999986532
Q ss_pred CCC-cceeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC----cc
Q 005278 568 GDD-SVIQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG----LT 640 (704)
Q Consensus 568 ~~~-~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~ 640 (704)
... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||.+.... ....++....... ..
T Consensus 156 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 233 (338)
T cd07859 156 DTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV--HQLDLITDLLGTPSPETIS 233 (338)
T ss_pred ccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChH--HHHHHHHHHhCCCCHHHHH
Confidence 221 112233468999999998765 67899999999999999999999999653211 1111111000000 00
Q ss_pred hhccc-------cchhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 641 EVVDA-------NLVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 641 ~~~~~-------~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.+... .+.... .........+..+.+++.+||+.||++||+++|+++.
T Consensus 234 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 234 RVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 000000 0000011234567899999999999999999999753
No 135
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=5.2e-37 Score=317.77 Aligned_cols=240 Identities=22% Similarity=0.263 Sum_probs=189.0
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 58899999987543 12234455666776654 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Cccc
Confidence 99999987654 4888999999999999999995 5789999999999999999999999999998653222 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.+... .......... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~---------------~~~ 214 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILND---------------RPH 214 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC---------------CCC
Confidence 45689999999999998999999999999999999999999976321 1111110000 001
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH-HHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK-DAA 686 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~-ev~ 686 (704)
.+..++..+.+++.+||+.+|++||++. ++.
T Consensus 215 ~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 215 FPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1122345678899999999999999875 443
No 136
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-36 Score=318.32 Aligned_cols=251 Identities=24% Similarity=0.252 Sum_probs=196.1
Q ss_pred CCCccccccccCceEEEEEEE----CCCCEEEEEEeeccc----hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 486 (704)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478889999999999999874 358899999986532 22345678899999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~l---H~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD-NFSEDEVRFYSGEIILALEHL---HKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 99999999999999997654 388999999999999999999 45789999999999999999999999999998654
Q ss_pred CCCCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
..... ......||+.|+|||++.+. .++.++|||||||++|||+||+.||....... ............ ++
T Consensus 157 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-~~~~~~~~~~~~------~~ 228 (332)
T cd05614 157 SEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERN-TQSEVSRRILKC------DP 228 (332)
T ss_pred ccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCC-CHHHHHHHHhcC------CC
Confidence 32221 12234689999999998765 47889999999999999999999996532211 111111111000 00
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
..+...+..+.+++.+|++.||++|| +++|+++
T Consensus 229 ---------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 229 ---------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred ---------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 11112345678899999999999999 6667754
No 137
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.6e-37 Score=309.08 Aligned_cols=253 Identities=26% Similarity=0.459 Sum_probs=203.0
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|++.+.||+|+||.||+|...++..+|+|.+..... ..+.+.+|+.++++++|+|++++++++.. ...+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 357888899999999999999988888999999865432 34678999999999999999999998754 5578999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++++|.+++... ...+++..+..++.+++.|++||| +.+|+||||||+||++++++.++|+|||++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc-
Confidence 999999999754 345899999999999999999995 567999999999999999999999999999876443221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||+..+..++.++||||||+++|||++ |..||.+.... ..........
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~---------------- 220 (260)
T cd05070 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGY---------------- 220 (260)
T ss_pred cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCC----------------
Confidence 1122345678999999988889999999999999999999 88898653211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
..+.+.+.+..+.+++.+|++.+|++|||++++.+.|++
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 221 -RMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -CCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 001122345678899999999999999999999998875
No 138
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.1e-37 Score=310.37 Aligned_cols=257 Identities=26% Similarity=0.484 Sum_probs=205.5
Q ss_pred hCCCCccccccccCceEEEEEEEC-CC---CEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DG---TNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.+.... ......+..|++++++++|||++++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346778899999999999999864 33 379999886543 3345678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
||||+++++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 99999999999999876667899999999999999999995 578999999999999999999999999999876433
Q ss_pred CCcce-eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 569 DDSVI-QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 569 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
..... ......+..|+|||++....++.++|||||||++||+++ |+.||..... .++...... .
T Consensus 161 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i~~-~-------- 226 (268)
T cd05063 161 PEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAIND-G-------- 226 (268)
T ss_pred cccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhc-C--------
Confidence 22111 111223567999999988889999999999999999998 9999865321 112111110 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
. ..+...+++.++.+++.+||+.+|++||++.+|++.|+++
T Consensus 227 ~-----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 F-----RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred C-----CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0 0111223456788999999999999999999999999875
No 139
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7e-37 Score=312.45 Aligned_cols=251 Identities=24% Similarity=0.307 Sum_probs=199.7
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.|+..+.||+|+||+||++... +++.||+|++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999854 689999999865321 223457789999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 492 FMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 99999999988754 345899999999999999999995 57899999999999999999999999999987643221
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....|++.|+|||++.+..++.++||||+||++||+++|+.||.+.... ..... +.......
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~-~~~~~~~~------------ 220 (285)
T cd05605 158 ---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREE-VERRVKED------------ 220 (285)
T ss_pred ---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHH-HHHHhhhc------------
Confidence 22346899999999999888999999999999999999999999763211 11111 11111000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAAK 688 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~~ 688 (704)
....+..++..+.+++..||+.||++|| +++++++.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 --QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred --ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 0011123456788999999999999999 78888553
No 140
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.8e-37 Score=321.91 Aligned_cols=238 Identities=26% Similarity=0.302 Sum_probs=191.7
Q ss_pred ccccccCceEEEEEEE----CCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 421 NLLGTGSFGSVYKGTL----FDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3589999999975432 233457789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++........ ..
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~~ 155 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--KA 155 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--ce
Confidence 999999997653 4899999999999999999995 57899999999999999999999999999986533211 12
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 156 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~~~---------------~ 215 (318)
T cd05582 156 YSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILKAK---------------L 215 (318)
T ss_pred ecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHcCC---------------C
Confidence 335689999999999888899999999999999999999999975321 11111110000 0
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKD 684 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~e 684 (704)
..+...+..+.+++..||+.||++||++.+
T Consensus 216 ~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 111233456788999999999999999655
No 141
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=7e-37 Score=308.40 Aligned_cols=253 Identities=24% Similarity=0.415 Sum_probs=204.1
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|+..++||+|+||.||+|...+++.||+|.+.... ...+.+.+|+.++++++|+||+++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 46788899999999999999998889999999987543 33467899999999999999999999874 45689999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++... +..+++..+..++.|++.|++|| |+.+++||||||+||+++.++.++++|||++.........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~L---H~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFI---ERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---hcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-
Confidence 999999998753 44689999999999999999999 5678999999999999999999999999999876432211
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||++.+..++.++||||||+++||+++ |+.||.+.... ..........
T Consensus 159 ~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~---------------- 220 (260)
T cd05067 159 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGY---------------- 220 (260)
T ss_pred cccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCC----------------
Confidence 1223346778999999988889999999999999999999 99999753211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
....+..++.++.+++.+|++.+|++||+++++.+.|+.
T Consensus 221 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 221 -RMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred -CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 001112335678999999999999999999999999875
No 142
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=8.2e-37 Score=313.81 Aligned_cols=261 Identities=25% Similarity=0.386 Sum_probs=200.4
Q ss_pred CCCCccccccccCceEEEEEEECC---------------CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD---------------GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIIS 478 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~ 478 (704)
++|++.+.||+|+||.||+++..+ ...||+|.++... ......+.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987532 2358999987543 233457899999999999999999999
Q ss_pred eeeeCCeEEEEEeccCCCCHHHHHhhCC-----------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCee
Q 005278 479 NCCNIDFKALVLEFMPNGSLEKWLYSHN-----------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNIL 547 (704)
Q Consensus 479 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil 547 (704)
++......++||||+++++|.+++.... ..+++..+..++.|++.|++|| |+.+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l---H~~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYL---ASLNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHH---HhcCeeccccChhhEE
Confidence 9999999999999999999999996432 2368889999999999999999 5678999999999999
Q ss_pred eCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh--CCCCCCccccccc
Q 005278 548 LDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT--RKKPTNEIFIGEM 625 (704)
Q Consensus 548 ~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t--g~~p~~~~~~~~~ 625 (704)
+++++.+||+|||++................++..|+|||+..++.++.++|||||||++|||++ |..||......+
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999986643322222233445788999999988889999999999999999998 566776532211
Q ss_pred cHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 626 SLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
................. ...+..++..+.+++.+||+.+|++||++++|++.|+
T Consensus 241 -~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 241 -VIENTGEFFRNQGRQIY----------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred -HHHHHHHhhhhcccccc----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11111100000000000 0011123467899999999999999999999999886
No 143
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.1e-37 Score=323.77 Aligned_cols=201 Identities=24% Similarity=0.354 Sum_probs=173.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||+||+|+.. +++.||+|++.... ......+..|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999854 68999999997543 223356788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++...+ .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~l---H~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~ 156 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSI---HQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHR 156 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccc
Confidence 9999999999998654 488999999999999999999 568899999999999999999999999999876532110
Q ss_pred c---------------------------------ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCC
Q 005278 571 S---------------------------------VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPT 617 (704)
Q Consensus 571 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~ 617 (704)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf 236 (363)
T cd05628 157 TEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (363)
T ss_pred ccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCC
Confidence 0 0012346999999999999999999999999999999999999999
Q ss_pred Cc
Q 005278 618 NE 619 (704)
Q Consensus 618 ~~ 619 (704)
.+
T Consensus 237 ~~ 238 (363)
T cd05628 237 CS 238 (363)
T ss_pred CC
Confidence 75
No 144
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=6.8e-37 Score=320.75 Aligned_cols=260 Identities=26% Similarity=0.409 Sum_probs=201.2
Q ss_pred hCCCCccccccccCceEEEEEEE------CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC-C
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL------FDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNI-D 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 484 (704)
.++|...+.||+|+||.||+|.. .+++.||||+++... ......+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 35788999999999999999973 347889999987543 23345688999999999 689999999988654 4
Q ss_pred eEEEEEeccCCCCHHHHHhhCC----------------------------------------------------------
Q 005278 485 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 506 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~---------------------------------------------------------- 506 (704)
..++||||+++|+|.+++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 5789999999999999986421
Q ss_pred --------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccc
Q 005278 507 --------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578 (704)
Q Consensus 507 --------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 578 (704)
..+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||++................
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 1357788889999999999999 56799999999999999999999999999998754332222222334
Q ss_pred ccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhh
Q 005278 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVK 657 (704)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (704)
++..|+|||...+..++.++||||||+++|||++ |..||........ ...... .+. ....+
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~----~~~-------------~~~~~ 304 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLK----EGT-------------RMRAP 304 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHh----ccC-------------CCCCC
Confidence 5678999999988889999999999999999997 8899865322110 111000 000 00001
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 658 IDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 658 ~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
...+.++.+++..||+.+|++||++.|+++.|+.+.+
T Consensus 305 ~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 305 DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123467899999999999999999999999998765
No 145
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.1e-37 Score=315.04 Aligned_cols=256 Identities=25% Similarity=0.403 Sum_probs=203.8
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 486 (704)
.++|+..+.||+|+||.||+|... ++..||+|++.... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999853 46789999987543 23456789999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC---------------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCC
Q 005278 487 ALVLEFMPNGSLEKWLYSHN---------------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNN 545 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~N 545 (704)
++|+||+++|+|.+++.... ..+++..++.++.|++.|++||| +.+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccHhh
Confidence 99999999999999997421 24678889999999999999995 5789999999999
Q ss_pred eeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCcccccc
Q 005278 546 ILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGE 624 (704)
Q Consensus 546 il~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~ 624 (704)
|+++.++.++|+|||++..+..............+..|+|||+..+..++.++|||||||++|||++ |..||.+...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999886543322222222345678999999988899999999999999999998 8888865321
Q ss_pred ccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 625 MSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
.++......... ...+..++.++.+++.+|++.+|++||++.|+++.|++
T Consensus 239 ---~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 ---EEVIYYVRDGNV--------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ---HHHHHHHhcCCC--------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 112111111000 01112345678899999999999999999999999863
No 146
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.3e-36 Score=308.23 Aligned_cols=257 Identities=23% Similarity=0.389 Sum_probs=205.7
Q ss_pred CCCCccccccccCceEEEEEEECC----CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD----GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
++|...+.||+|+||.||+|...+ ...||+|...... ....+.+.+|+.++++++||||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457788899999999999998543 3468999887554 3455679999999999999999999998876 456899
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++|+|.+++......+++..+..++.+++.|++||| +.+++||||||+||+++.++.++++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 9999999999999876666899999999999999999994 5789999999999999999999999999998764432
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
. .......++..|+|||.+....++.++||||||+++||+++ |..||......+ ...+.....
T Consensus 162 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~~------------- 225 (270)
T cd05056 162 Y-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENGE------------- 225 (270)
T ss_pred c-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcCC-------------
Confidence 1 11222335678999999888889999999999999999986 999997643211 111111000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
....+..++..+.+++.+|+..+|++||++.++++.|++++.+
T Consensus 226 ----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 ----RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred ----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0111224456788999999999999999999999999998654
No 147
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.7e-37 Score=325.96 Aligned_cols=251 Identities=20% Similarity=0.284 Sum_probs=192.7
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.|+..+.||+|+||+||+|+. .+++.||+|++.... ......+.+|++++++++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 588899999999999999985 468899999987542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC-
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD- 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~- 570 (704)
|+++|+|.+++.+.+ .+++.....++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~l---H~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESV---HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 999999999997654 478888899999999999999 557899999999999999999999999999753311000
Q ss_pred --------------------------------------------cceeccccccccccCCcccCCCCCCcccceeeHHHH
Q 005278 571 --------------------------------------------SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGIL 606 (704)
Q Consensus 571 --------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~ 606 (704)
........||+.|+|||++.+..++.++||||+||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 000112368999999999999999999999999999
Q ss_pred HHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC---HH
Q 005278 607 LMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS---MK 683 (704)
Q Consensus 607 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt---~~ 683 (704)
+|||++|+.||......+. ...... . .. .. ..+.....+.++.+++.+++ .+|++|++ +.
T Consensus 238 l~elltG~~Pf~~~~~~~~-~~~i~~-~-~~--------~~-----~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLET-QMKVIN-W-QT--------SL-----HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred HHHHHhCCCCCCCCCHHHH-HHHHHc-c-CC--------Cc-----CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999976321110 001000 0 00 00 00011123445667777765 49999997 77
Q ss_pred HHHH
Q 005278 684 DAAA 687 (704)
Q Consensus 684 ev~~ 687 (704)
|+++
T Consensus 301 ei~~ 304 (382)
T cd05625 301 EIKA 304 (382)
T ss_pred HHhc
Confidence 7654
No 148
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-36 Score=305.14 Aligned_cols=258 Identities=23% Similarity=0.326 Sum_probs=208.5
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888999999999999999966 79999999886432 233567899999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
||+++|+|.+++.. ....+++..+..++.+++.|+.|| |+.+|+||||+|+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHM---HSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHH---HhCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 99999999999863 345588999999999999999999 567899999999999999999999999999886543
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
.... .....+++.|+|||+..+..++.++|||||||++|+|++|+.||.... .....+..........
T Consensus 159 ~~~~--~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~------- 226 (267)
T cd08224 159 KTTA--AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCDYP------- 226 (267)
T ss_pred CCcc--cceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCCCC-------
Confidence 2211 223458889999999988889999999999999999999999985422 2222221111000000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
......++..+.+++.+||+.+|++||++.+|+++|+++.
T Consensus 227 ------~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 227 ------PLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ------CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0011134567889999999999999999999999999874
No 149
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=5.7e-37 Score=325.89 Aligned_cols=253 Identities=22% Similarity=0.297 Sum_probs=195.2
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|...+.||+|+||.||+++. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4788899999999999999985 478999999986532 223456888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++...+ .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~ 156 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAV---HKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHD 156 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHEEECCCCCEEEeecccccccccccc
Confidence 9999999999997653 478888899999999999999 567899999999999999999999999999964321100
Q ss_pred c-----------c----------------------------------eeccccccccccCCcccCCCCCCcccceeeHHH
Q 005278 571 S-----------V----------------------------------IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGI 605 (704)
Q Consensus 571 ~-----------~----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv 605 (704)
. . ......||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 236 (377)
T cd05629 157 SAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGA 236 (377)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecch
Confidence 0 0 001236999999999999989999999999999
Q ss_pred HHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCC---CCH
Q 005278 606 LLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQR---VSM 682 (704)
Q Consensus 606 ~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R---pt~ 682 (704)
++|||++|..||......+ .+..... . ...+ ..+.....+..+.+++.+|+. +|.+| +++
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~~-~-~~~~-------------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 237 IMFECLIGWPPFCSENSHE-TYRKIIN-W-RETL-------------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred hhhhhhcCCCCCCCCCHHH-HHHHHHc-c-CCcc-------------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 9999999999996532111 0111100 0 0000 000111234567789999997 77765 589
Q ss_pred HHHHHH
Q 005278 683 KDAAAK 688 (704)
Q Consensus 683 ~ev~~~ 688 (704)
.|+++.
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 988664
No 150
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=5.4e-37 Score=318.21 Aligned_cols=237 Identities=23% Similarity=0.270 Sum_probs=189.8
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36899999999999865 68899999987542 22345667888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--KTTS 154 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--Cccc
Confidence 99999887654 4889999999999999999995 5789999999999999999999999999987542221 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~---------------~~ 214 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAILNDE---------------VV 214 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhcCC---------------CC
Confidence 45689999999999988999999999999999999999999975321 11111111100 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
.+...+.++.+++.+|++.||++||++.
T Consensus 215 ~~~~~~~~~~~li~~~L~~dP~~R~~~~ 242 (320)
T cd05590 215 YPTWLSQDAVDILKAFMTKNPTMRLGSL 242 (320)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCC
Confidence 1112345678899999999999999983
No 151
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.8e-36 Score=308.03 Aligned_cols=246 Identities=22% Similarity=0.286 Sum_probs=193.8
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||.||+++.. +|+.+|+|.+..... .....+..|++++++++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999854 699999999864321 2234566799999999999999999999999999999999999999
Q ss_pred HHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccc
Q 005278 499 EKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577 (704)
Q Consensus 499 ~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 577 (704)
.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... .....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQR 154 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeecc
Confidence 9988643 345889999999999999999994 5789999999999999999999999999998764322 12334
Q ss_pred cccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhh
Q 005278 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVK 657 (704)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (704)
.|++.|+|||++.+..++.++||||+||++|||++|+.||...... .............. ... ..
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~--------~~~------~~ 219 (277)
T cd05607 155 AGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKEELKRRTLEDE--------VKF------EH 219 (277)
T ss_pred CCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcch-hhHHHHHHHhhccc--------ccc------cc
Confidence 6899999999998888999999999999999999999999753221 11111111111100 000 00
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 658 IDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 658 ~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
..++.++.+++.+||+.||++||+++|+++..
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 12355678999999999999999998776433
No 152
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=7.9e-37 Score=317.49 Aligned_cols=241 Identities=24% Similarity=0.265 Sum_probs=191.5
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999865 58899999987543 22335577888888876 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--VTTT 154 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCC--cccc
Confidence 99999887654 4788999999999999999995 5789999999999999999999999999987643221 1123
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-----~~~~~i~~~~---------------~~ 214 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-----DLFESILHDD---------------VL 214 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC---------------CC
Confidence 346899999999999889999999999999999999999999763211 1111111000 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCC-------CHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRV-------SMKDAAA 687 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rp-------t~~ev~~ 687 (704)
.+..++.++.+++..|++.||++|| ++.++++
T Consensus 215 ~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 215 YPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 1112345678899999999999999 6677654
No 153
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.8e-37 Score=310.68 Aligned_cols=260 Identities=26% Similarity=0.450 Sum_probs=207.9
Q ss_pred CCCCccccccccCceEEEEEEEC-CCC----EEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGT----NVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.+|...+.||+|+||.||+|... +|+ .+|+|.+..... .....+.+|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56788899999999999999854 333 589998765532 345678899999999999999999999887 67899
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|+||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 99999999999999887667899999999999999999995 588999999999999999999999999999876543
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
..........++..|+|||......++.++|+||||+++||+++ |+.||...... .+.+.+....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~------------ 228 (279)
T cd05057 163 EKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAV--EIPDLLEKGE------------ 228 (279)
T ss_pred ccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHhCCC------------
Confidence 32222222334678999999988889999999999999999999 99998763211 1122111100
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhh
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFL 697 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~ 697 (704)
....+..++..+.+++.+||..+|++||++.++++.|+++.++..
T Consensus 229 -----~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~~ 273 (279)
T cd05057 229 -----RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDPQ 273 (279)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCCc
Confidence 011112234567889999999999999999999999999866543
No 154
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9e-37 Score=310.78 Aligned_cols=244 Identities=23% Similarity=0.260 Sum_probs=193.1
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||+||++... +++.||+|.+..... ...+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999854 689999999865432 1234677899999999999999999999999999999999999999
Q ss_pred HHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 499 EKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 499 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
.+++.. ....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++..+...... ..
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--TK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--cc
Confidence 988853 3345899999999999999999995 578999999999999999999999999999876443221 22
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............ ...
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~---------------~~~ 219 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILND---------------SVT 219 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhccc---------------CCC
Confidence 3468999999999999999999999999999999999999997532111 111111110000 001
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
.+..++..+.+++..|++.||++|| +++++++
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 220 YPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 1223456788999999999999999 5666654
No 155
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.5e-37 Score=312.32 Aligned_cols=255 Identities=25% Similarity=0.416 Sum_probs=203.6
Q ss_pred hCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 486 (704)
.++|.+.+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 357888899999999999999854 24689999986543 23345788999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCC---------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEe
Q 005278 487 ALVLEFMPNGSLEKWLYSHN---------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVS 557 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~ 557 (704)
++||||+++|+|.+++.... ..+++..++.++.|++.|+.|| |+.+|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYL---AAKKFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccccccChheEEEcCCCCEEEC
Confidence 99999999999999997432 2367889999999999999999 46789999999999999999999999
Q ss_pred eeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcC
Q 005278 558 DFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLP 636 (704)
Q Consensus 558 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 636 (704)
|||+++.+.............++..|+|||.+.++.++.++|||||||++||++| |..||..... .....+...
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~--- 236 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVID--- 236 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHHhc---
Confidence 9999986644332222233456789999999988889999999999999999998 8889865221 111111110
Q ss_pred CCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 637 DGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. ....+..++..+.+++.+||+.+|++|||+.|+++.|+
T Consensus 237 ~~--------------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 GG--------------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CC--------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 00 00111233567889999999999999999999999886
No 156
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=6.3e-37 Score=315.72 Aligned_cols=259 Identities=26% Similarity=0.455 Sum_probs=204.9
Q ss_pred CCCCccccccccCceEEEEEEEC-CCC----EEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGT----NVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~----~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
++|+..+.||+|+||.||+|... +|+ .||+|.+..... .....+.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 56778889999999999999853 444 478888764432 2334688999999999999999999998764 4679
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
++||+++|+|.+++..+...+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred eehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---hhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 9999999999999987766789999999999999999999 5678999999999999999999999999999876433
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
..........++..|+|||++.+..++.++|||||||++||+++ |+.||.+... .....++....
T Consensus 163 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~------------ 228 (303)
T cd05110 163 EKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGE------------ 228 (303)
T ss_pred ccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCC------------
Confidence 22222223346778999999988899999999999999999998 8999865321 11222222110
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHh
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 696 (704)
..+.+..++..+.+++..||..+|++||+++|+++.|+++.++.
T Consensus 229 -----~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 229 -----RLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred -----CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 00111123456788999999999999999999999999986554
No 157
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=9e-37 Score=314.43 Aligned_cols=257 Identities=29% Similarity=0.477 Sum_probs=201.3
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCC--EEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGT--NVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 488 (704)
.++|+..+.||+|+||.||+|... ++. .+|+|.+.... ......+.+|++++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 457888899999999999999864 454 45777765432 23446788999999999 89999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 005278 489 VLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~ 553 (704)
||||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+|+||||||+||++++++.
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~gi~H~dlkp~Nili~~~~~ 162 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYV 162 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHH---HhCCccccccchheEEecCCCc
Confidence 999999999999997432 2478899999999999999999 5678999999999999999999
Q ss_pred EEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHH
Q 005278 554 AHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 554 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~ 632 (704)
+||+|||++...... .......++..|+|||++.+..++.++|||||||++|||+| |..||...... ....
T Consensus 163 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-----~~~~ 234 (303)
T cd05088 163 AKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYE 234 (303)
T ss_pred EEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH-----HHHH
Confidence 999999998643211 11122234678999999988889999999999999999998 99998653211 1111
Q ss_pred hhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 633 ESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
. .+... ....+..++..+.+++.+||+.+|++||++.++++.|+.+.+.
T Consensus 235 ~-~~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 235 K-LPQGY-------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred H-HhcCC-------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1 11100 0001112345678999999999999999999999999887544
No 158
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.4e-36 Score=310.58 Aligned_cols=271 Identities=27% Similarity=0.386 Sum_probs=207.5
Q ss_pred CCCCccccccccCceEEEEEEEC-----CCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-----DGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCN--IDFK 486 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 486 (704)
.+|...+.||+|+||.||+|++. ++..+|||.+...... ..+.+.+|++.++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35677789999999999999853 3688999998755432 45689999999999999999999999877 5578
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||+++++|.+++......+++..+..++.|++.|++||| +.+++||||||+||+++.++.++++|||.+....
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 9999999999999999877667899999999999999999995 5789999999999999999999999999998775
Q ss_pred CCCCcc-eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDDSV-IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
...... ......++..|+|||...+..++.++||||||+++|||+||+.|+......... +...............
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 161 EDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLLE 237 (284)
T ss_pred cCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHHH
Confidence 332211 111234566799999998888999999999999999999999998653221110 0000000000000000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
.+. .......+..++.++.+++.+||+.+|++||+|.||+++|+++
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHH-cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 000 0011112234557789999999999999999999999999876
No 159
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=8.3e-37 Score=317.76 Aligned_cols=241 Identities=22% Similarity=0.257 Sum_probs=192.0
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCC-CCceEEeeeeeCCeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHR-NLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 490 (704)
+|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+..|.+++..++|+ +|+++.+++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 57899999987543 23345678899999999765 5888999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG- 155 (324)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-
Confidence 9999999999987654 3788999999999999999995 5789999999999999999999999999987532211
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.. . .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~---~--------~---- 217 (324)
T cd05587 156 -KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIME---H--------N---- 217 (324)
T ss_pred -CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHc---C--------C----
Confidence 1223446899999999999999999999999999999999999999753211 11111110 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSM 682 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~ 682 (704)
...+...+.++.+++.+|++.||++|++.
T Consensus 218 ---~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ---VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00111234567889999999999999976
No 160
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=3.7e-37 Score=327.37 Aligned_cols=253 Identities=20% Similarity=0.279 Sum_probs=194.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999854 68999999986532 223456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++...+ .+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|..+.....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 9999999999997654 4788888889999999999995 57899999999999999999999999999753310000
Q ss_pred -----------------------------------------cceeccccccccccCCcccCCCCCCcccceeeHHHHHHH
Q 005278 571 -----------------------------------------SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLME 609 (704)
Q Consensus 571 -----------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~e 609 (704)
........||+.|+|||++.+..++.++|||||||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 000112469999999999999999999999999999999
Q ss_pred HhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC---CHHHHH
Q 005278 610 TFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRV---SMKDAA 686 (704)
Q Consensus 610 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp---t~~ev~ 686 (704)
|++|+.||.+....+ +..... .. . ... ..+....++..+.+++.+|+ .+|++|+ ++.|++
T Consensus 237 ll~G~~Pf~~~~~~~-----~~~~i~-~~-~----~~~-----~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell 299 (376)
T cd05598 237 MLVGQPPFLADTPAE-----TQLKVI-NW-E----TTL-----HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIK 299 (376)
T ss_pred hhhCCCCCCCCCHHH-----HHHHHh-cc-C----ccc-----cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHh
Confidence 999999997632211 111000 00 0 000 00001123445667777766 4999999 888886
Q ss_pred HH
Q 005278 687 AK 688 (704)
Q Consensus 687 ~~ 688 (704)
+.
T Consensus 300 ~h 301 (376)
T cd05598 300 AH 301 (376)
T ss_pred CC
Confidence 54
No 161
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.1e-37 Score=309.26 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=200.7
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
.++|++.+.||+|+||.||+|+. .+++.||+|++........+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35789999999999999999985 57899999998755444556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+|||++|+||+++.++.++|+|||++..+.....
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~-- 161 (267)
T cd06646 88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA-- 161 (267)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccccc--
Confidence 99999999987543 4789999999999999999995 57899999999999999999999999999987643221
Q ss_pred eeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 573 IQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
......+++.|+|||.+. ...++.++|||||||++|||++|+.||......+. ...+.. ..+..
T Consensus 162 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~------------~~~~~ 228 (267)
T cd06646 162 KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSK------------SNFQP 228 (267)
T ss_pred ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeec------------CCCCC
Confidence 122346889999999874 44578899999999999999999999864321110 000000 00000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.........+..+.+++.+||+.+|++||+++++++.
T Consensus 229 --~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 229 --PKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred --CCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0001111335678899999999999999999999864
No 162
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.5e-36 Score=304.39 Aligned_cols=248 Identities=33% Similarity=0.501 Sum_probs=200.6
Q ss_pred ccccccCceEEEEEEECCCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHH
Q 005278 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLE 499 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 499 (704)
++||+|+||.||+|...+++.||+|.+...... ....+.+|++++++++|+||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 369999999999999777999999998765433 4567899999999999999999999999999999999999999999
Q ss_pred HHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccc
Q 005278 500 KWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579 (704)
Q Consensus 500 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g 579 (704)
+++......+++..+..++.+++.|++|| |+.+++||||+|+||+++.++.++|+|||++................+
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~l---H~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ 157 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYL---ESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQI 157 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcc
Confidence 99986655688999999999999999999 567899999999999999999999999999986543222111122334
Q ss_pred cccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
+..|+|||.+.++.++.++|+|||||++|||+| |..||...... .......... ....+.
T Consensus 158 ~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~-----------------~~~~~~ 218 (251)
T cd05041 158 PIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGY-----------------RMPAPQ 218 (251)
T ss_pred eeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCC-----------------CCCCCc
Confidence 677999999988899999999999999999999 78888653211 1111111000 011122
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.++..+.+++.+|++.+|++||++.|+++.|+
T Consensus 219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 219 LCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred cCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 34567899999999999999999999999886
No 163
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=7.8e-37 Score=322.97 Aligned_cols=254 Identities=20% Similarity=0.279 Sum_probs=199.1
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
..++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+....++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568999999999999999999864 68999999986432 2233457889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
||||+++|+|.+++.... ++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 121 v~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999987543 678888889999999999995 578999999999999999999999999999876432
Q ss_pred CCcceeccccccccccCCcccCCC----CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEG----IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
.. .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..... .. ..
T Consensus 196 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~----~~-~~--- 265 (370)
T cd05596 196 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMD----HK-NS--- 265 (370)
T ss_pred Cc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHHHHHc----CC-Cc---
Confidence 21 112345699999999987643 4788999999999999999999999753211 01111100 00 00
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQ--RVSMKDAAAK 688 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~ev~~~ 688 (704)
+ ..+....++.++.+++..|++.+|++ ||++.|+++.
T Consensus 266 --~-----~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 --L-----TFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --C-----CCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 00111123567888999999999988 9999999653
No 164
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.3e-36 Score=306.66 Aligned_cols=248 Identities=31% Similarity=0.522 Sum_probs=203.9
Q ss_pred ccccccCceEEEEEEECC----CCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLFD----GTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|.... +..||+|.+...... ..+.+.+|++.++.++|+||+++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998653 889999998765433 357889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC--------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 496 GSLEKWLYSH--------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 496 gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
++|.+++... ...+++..++.++.|++.|++|| |+.+++||||+|+||+++.++.++|+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---H~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYL---ASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHH---HcCCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999875 46789999999999999999999 568899999999999999999999999999988755
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
...........+++.|+|||......++.++||||+|+++|||++ |..||..... ......... .
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~----~-------- 223 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK----G-------- 223 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc----C--------
Confidence 432222334567889999999988889999999999999999999 6999876421 111111110 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.....+..++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 224 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 -----YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -----CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011122244677889999999999999999999998873
No 165
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.4e-36 Score=311.98 Aligned_cols=250 Identities=23% Similarity=0.312 Sum_probs=202.7
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+|+..+.||+|+||.||+|.. .+++.||+|.+..........+.+|+.+++.++|+||+++++.+......++||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35888899999999999999985 46899999998765555567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++... .+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.++|+|||++........
T Consensus 99 ~~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~L---H~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 99 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred cCCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 9999999998754 378889999999999999999 567899999999999999999999999999876543221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......+++.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.. ........
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~-~~~~~~~~----------- 235 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYL-IATNGTPE----------- 235 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHH-HhcCCCCC-----------
Confidence 122346889999999998888999999999999999999999999653221 11111 00000000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...+..+.+++.+||..+|++||++.|+++
T Consensus 236 -~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 236 -LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred -CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence 0011233456788999999999999999999976
No 166
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-36 Score=314.84 Aligned_cols=240 Identities=24% Similarity=0.295 Sum_probs=189.9
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||||+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999865 57899999987643 22334566777888764 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++... ..+++.....++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~L---H~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (316)
T cd05619 81 GDLMFHIQSC-HKFDLPRATFYAAEIICGLQFL---HSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KTC 154 (316)
T ss_pred CcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---HhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--cee
Confidence 9999999764 3478889999999999999999 567899999999999999999999999999875422211 123
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+... .+ .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~---------~~---------~ 214 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMD---------NP---------C 214 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhC---------CC---------C
Confidence 346899999999999989999999999999999999999999753211 111111100 00 0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH-HHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK-DAA 686 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~-ev~ 686 (704)
.+..+...+.+++.+|++.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1112345678899999999999999997 554
No 167
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.2e-36 Score=306.61 Aligned_cols=252 Identities=26% Similarity=0.431 Sum_probs=201.9
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
++|.+.+.||+|++|.||+|...++..+|+|.+.... ...+.+.+|++++++++|+|++++++++.. +..++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEEcCC
Confidence 4678889999999999999998777789999876432 234678899999999999999999998754 56789999999
Q ss_pred CCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 495 NGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 495 ~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
+|+|.+++... ...+++..+..++.+++.|++||| +.+++|+||+|+||++++++.++|+|||++......... .
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT-A 159 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-c
Confidence 99999999754 345789999999999999999994 578999999999999999999999999999876433221 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....++..|+|||+..+..++.++||||||+++|||+| |..||.+.... ....+......
T Consensus 160 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~---------------- 221 (260)
T cd05069 160 RQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYR---------------- 221 (260)
T ss_pred cCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCC----------------
Confidence 222346778999999988889999999999999999999 89998763221 11111111100
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
...+.+.+..+.+++.+||+.+|++||++++|++.|++
T Consensus 222 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 222 -MPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01112345678899999999999999999999999875
No 168
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-36 Score=306.12 Aligned_cols=248 Identities=26% Similarity=0.403 Sum_probs=199.6
Q ss_pred ccccccCceEEEEEEECC--C--CEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLFD--G--TNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|++|.||+|.+.+ + ..||+|.+..... ...+.+.+|++++++++||||+++++.+.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 368999999999998643 3 3689999876654 556789999999999999999999999988 888999999999
Q ss_pred CCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc-e
Q 005278 496 GSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-I 573 (704)
Q Consensus 496 gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~-~ 573 (704)
|+|.+++.... ..+++...+.++.|++.|++|| |+.+++||||+|+||+++.++.+||+|||++..+....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 156 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYL---ESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVM 156 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHH---HhCCccccccCcccEEEecCCEEEeccccccccccccccceec
Confidence 99999998654 5689999999999999999999 56789999999999999999999999999998775432211 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....++..|+|||++.+..++.++|||||||++|||++ |..||......+ ....... .. .
T Consensus 157 ~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~---~~-------------~ 218 (257)
T cd05040 157 EEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ--ILKKIDK---EG-------------E 218 (257)
T ss_pred ccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHh---cC-------------C
Confidence 123457789999999998899999999999999999999 999986532211 1111110 00 0
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
....+..++..+.+++..|++.+|++||++.|+++.|.
T Consensus 219 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00111234567889999999999999999999998875
No 169
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.1e-36 Score=310.86 Aligned_cols=262 Identities=26% Similarity=0.390 Sum_probs=201.5
Q ss_pred CCCCccccccccCceEEEEEEEC-----------------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-----------------DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKI 476 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 476 (704)
++|+..+.||+|+||.||++... ++..+|+|++.... ......+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56889999999999999998532 23468999987543 2344678999999999999999999
Q ss_pred EeeeeeCCeEEEEEeccCCCCHHHHHhhCC----------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCe
Q 005278 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHN----------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNI 546 (704)
Q Consensus 477 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Ni 546 (704)
++++...+..++||||+++|+|.+++.... ..+++.....++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChheE
Confidence 999999999999999999999999997532 23677889999999999999995 57899999999999
Q ss_pred eeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh--CCCCCCcccccc
Q 005278 547 LLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT--RKKPTNEIFIGE 624 (704)
Q Consensus 547 l~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t--g~~p~~~~~~~~ 624 (704)
+++.++.++++|||+++.+.............++..|+|||...++.++.++|||||||++|||++ |..||......+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 999999999999999986644322222223345678999998888889999999999999999998 678886532211
Q ss_pred ccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 625 MSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
. ............... ..+.+..++..+.+++.+||+.||++||++.||++.|++
T Consensus 242 ~--~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 V--IENTGEFFRDQGRQV----------YLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred H--HHHHHHHHhhccccc----------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 1 000000000000000 001122345678899999999999999999999998863
No 170
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=1.8e-36 Score=305.27 Aligned_cols=239 Identities=22% Similarity=0.334 Sum_probs=189.1
Q ss_pred ccccccCceEEEEEEECC-------------CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 421 NLLGTGSFGSVYKGTLFD-------------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2258899876654455567889999999999999999999999988999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc-------EEEeeec
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT-------AHVSDFG 560 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~-------~kl~Dfg 560 (704)
+||||+++|+|..++......+++..+..++.|+++|++|| |+.+|+||||||+||+++.++. ++++|||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g 157 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYL---EDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPG 157 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHh---hhCCeECCCCCcccEEEecCCccCCCCceeEeCCCC
Confidence 99999999999999887666689999999999999999999 5688999999999999987664 8999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccC-CCCCCcccceeeHHHHHHHHh-hCCCCCCccccccccHHHHHHhhcCCC
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETF-TRKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~-tg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..|+......+ ...... .
T Consensus 158 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~-----~ 224 (262)
T cd05077 158 IPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYE-----G 224 (262)
T ss_pred CCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHh-----c
Confidence 98755321 2235788899999876 567899999999999999998 5888876522110 000000 0
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
.. ........++.+++.+||+.||++||++.|+++.+
T Consensus 225 -------~~-------~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 -------QC-------MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred -------Cc-------cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 00011235678899999999999999999998875
No 171
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-36 Score=303.95 Aligned_cols=249 Identities=25% Similarity=0.323 Sum_probs=203.0
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|++|.||+|... +++.|++|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677889999999999999864 68999999986432 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++++|.+++... ...+++..++.++.+++.|+.||| +.+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~- 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN- 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc-
Confidence 9999999999864 456899999999999999999995 57899999999999999999999999999987654322
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......|++.|+|||+..+..++.++|+||||+++|||++|+.||..... ........ ....
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~---~~~~------------ 218 (256)
T cd08529 157 -FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKII---RGVF------------ 218 (256)
T ss_pred -hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH---cCCC------------
Confidence 12334688999999999998899999999999999999999999975321 11111111 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+..++..+.+++.+||+.+|++||++.|+++.
T Consensus 219 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 --PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 01111345678899999999999999999999753
No 172
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.5e-36 Score=305.84 Aligned_cols=256 Identities=24% Similarity=0.327 Sum_probs=201.9
Q ss_pred HHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 410 IQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 410 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
++.+++.+.....||+|+||.||+|+.. ++..||+|.+........+.+.+|+.++++++|+||+++++++...+..++
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 3445666777789999999999999854 678899999876655566789999999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCcc--CHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeeccceec
Q 005278 489 VLEFMPNGSLEKWLYSHNYFL--GILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLL 565 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfgla~~~ 565 (704)
|+||+++++|.+++......+ ++..+..++.|++.|++||| +.+|+||||||+||+++. ++.++|+|||++...
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 999999999999998654434 78888899999999999994 578999999999999986 679999999999866
Q ss_pred CCCCCcceeccccccccccCCcccCCCC--CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGI--ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
..... ......+++.|+|||++.+.. ++.++||||||+++|+|++|+.||....... ...|....
T Consensus 160 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~--~~~~~~~~--------- 226 (268)
T cd06624 160 AGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQ--AAMFKVGM--------- 226 (268)
T ss_pred ccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChh--hhHhhhhh---------
Confidence 43221 122345889999999876543 7889999999999999999999986532111 11110000
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. .....+..+..++.+++.+||+.+|++||++.|+++
T Consensus 227 ----~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 227 ----FK--IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ----hc--cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 000112234566889999999999999999999965
No 173
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.2e-36 Score=316.39 Aligned_cols=241 Identities=22% Similarity=0.249 Sum_probs=192.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 490 (704)
+|...+.||+|+||.||+|+.. +++.||+|++..... ...+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999865 578999999875432 2234566788888877 5899999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred cCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 9999999999987654 3788999999999999999995 5789999999999999999999999999997543211
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||...... .....+.. . .
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~--~~~~~i~~---~--------~---- 217 (323)
T cd05616 156 -VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED--ELFQSIME---H--------N---- 217 (323)
T ss_pred -CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH--HHHHHHHh---C--------C----
Confidence 1223456899999999999999999999999999999999999999763211 11111110 0 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSM 682 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~ 682 (704)
...+...+.++.+++.+|++.+|++|++.
T Consensus 218 ---~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 218 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ---CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 00112335567889999999999999985
No 174
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.4e-36 Score=312.39 Aligned_cols=265 Identities=17% Similarity=0.269 Sum_probs=199.9
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|...+.||+|+||.||+|+.. +++.||+|.++... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57888999999999999999864 68889999987543 22334677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++ ++.+++...+..+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK-- 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc--
Confidence 975 89998887666688999999999999999999 457899999999999999999999999999976533221
Q ss_pred eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh--cCCC-cchhc-----
Q 005278 573 IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES--LPDG-LTEVV----- 643 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~-~~~~~----- 643 (704)
......+++.|+|||++.+ ..++.++|||||||++|||+||+.||......+. +....+.. .... +....
T Consensus 160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07872 160 TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE-LHLIFRLLGTPTEETWPGISSNDEF 238 (309)
T ss_pred ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHHhhhcchhhh
Confidence 1223467899999998764 5688999999999999999999999975322110 00100000 0000 00000
Q ss_pred -c---ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 -D---ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 -~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+ +..... .........+.++.+++.+|++.||.+|||+.|+++
T Consensus 239 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 239 KNYNFPKYKPQ-PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhcCccCCC-chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 0 000000 000111234567789999999999999999999976
No 175
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=8.7e-37 Score=317.45 Aligned_cols=237 Identities=24% Similarity=0.290 Sum_probs=187.0
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHH-HHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECE-ILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||+||+|+.. +|+.||+|++..... .....+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999964 689999999875421 22234444444 56789999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTTS 154 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Cccc
Confidence 99999987654 4788899999999999999995 5789999999999999999999999999987542221 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~---------------~~ 214 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILNKP---------------LR 214 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCC---------------CC
Confidence 4468999999999999999999999999999999999999997531 111111111100 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
.....+..+.+++.+|++.||++||+++
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 215 LKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 1112355678899999999999999985
No 176
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-36 Score=315.62 Aligned_cols=241 Identities=23% Similarity=0.273 Sum_probs=193.2
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||||++.... ......+..|.++++.+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999865 58899999997543 22345677888899888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|..++.... .+++..+..++.|++.||+|| |+.+|+||||||+||++++++.+||+|||+++....... ...
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~L---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFL---HERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TTS 154 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--ccc
Confidence 99999887653 489999999999999999999 567899999999999999999999999999875322211 122
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...|++.|+|||++.+..++.++|||||||++|||++|+.||..... ........... ..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~-----~~~~~~i~~~~---------------~~ 214 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE-----DELFQSILEDE---------------VR 214 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH-----HHHHHHHHcCC---------------CC
Confidence 34689999999999999999999999999999999999999975321 11111100000 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCH-----HHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSM-----KDAAA 687 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~-----~ev~~ 687 (704)
.+..++..+.+++.+||+.||++||++ .++++
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 215 YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 112335668899999999999999999 77754
No 177
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2.4e-36 Score=308.37 Aligned_cols=249 Identities=24% Similarity=0.303 Sum_probs=198.6
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
|++.+.||+|+||.||+|... ++..+|+|.+..........+.+|+++++.++|||++++++++......++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 566788999999999999865 5788899998765555566788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|..++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+|++|||++....... ....
T Consensus 87 ~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~~~~ 161 (282)
T cd06643 87 GAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--QRRD 161 (282)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEccccccccccccc--cccc
Confidence 9999988765566899999999999999999995 5789999999999999999999999999987653321 1123
Q ss_pred cccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 576 MTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
...+++.|+|||++. +..++.++|||||||++|||++|+.||......+ ......... +.
T Consensus 162 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~-~~------------- 226 (282)
T cd06643 162 SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSE-PP------------- 226 (282)
T ss_pred cccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcC-CC-------------
Confidence 346899999999873 4457789999999999999999999987632111 111111000 00
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+..++..+.+++..||+.+|++||++.++++
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 227 --TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred --CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111233457889999999999999999999864
No 178
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.5e-36 Score=308.76 Aligned_cols=251 Identities=25% Similarity=0.282 Sum_probs=201.3
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
+.|++.+.||+|+||.||+|+.. +++.+|+|.+........+.+.+|+.+++.++||||+++++++......++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888999999999999999865 58999999987665555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
+++++..++.+....+++..+..++.|++.+++|| |+.+++||||+|+||+++.++.++|+|||++....... ..
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~l---H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~ 166 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYL---HSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--QR 166 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hcCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--cc
Confidence 99999998876666689999999999999999999 56789999999999999999999999999987543221 11
Q ss_pred eccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 574 QTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.....+++.|+|||++. ...++.++|||||||++|||++|..||...... .....+ .....
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~----~~~~~--------- 232 (292)
T cd06644 167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKI----AKSEP--------- 232 (292)
T ss_pred cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHH----hcCCC---------
Confidence 22345788999999874 345788999999999999999999998653211 011111 00000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+....+..++.++.+++.+||+.+|++||++.|+++
T Consensus 233 ---~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 233 ---PTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ---ccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000111233456788999999999999999999965
No 179
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.1e-36 Score=321.17 Aligned_cols=256 Identities=20% Similarity=0.271 Sum_probs=198.0
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeE
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 486 (704)
....++|+..+.||+|+||.||+++.. +++.+|+|++.... ......+.+|+.+++.++||||+++++++.+.+..
T Consensus 39 ~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~ 118 (370)
T cd05621 39 QMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL 118 (370)
T ss_pred CCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence 334578999999999999999999965 68899999986432 22345678999999999999999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||+++|+|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+|....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 119 YMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 9999999999999999754 3788889999999999999995 5789999999999999999999999999998764
Q ss_pred CCCCcceeccccccccccCCcccCCC----CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEG----IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
.... .......||+.|+|||++.+. .++.++||||+||++|||++|+.||...... ..+........
T Consensus 194 ~~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-~~~~~i~~~~~------- 264 (370)
T cd05621 194 ETGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-GTYSKIMDHKN------- 264 (370)
T ss_pred cCCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCc-------
Confidence 3221 122345699999999987653 3788999999999999999999999753211 11111111000
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQ--RVSMKDAAAK 688 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~ev~~~ 688 (704)
.+ ..+.....+..+.+++..|++.+|.+ ||++.|+++.
T Consensus 265 ---~~-----~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 265 ---SL-----NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred ---cc-----CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 00 00111123456777888899755543 8899998764
No 180
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.6e-36 Score=306.06 Aligned_cols=254 Identities=27% Similarity=0.456 Sum_probs=205.6
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|.+.+.||+|+||.||+|..++++.+|||.+.... ...+.+.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 46788899999999999999998888899999987542 33467899999999999999999999999888999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++++|.+++.... ..+++..+..++.+++.|++||| +.+++|+||+|+||++++++.++++|||.+........ .
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-~ 159 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY-T 159 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccchhh-h
Confidence 9999999998643 46899999999999999999994 57899999999999999999999999999987643211 1
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||...+..++.++||||+|+++||+++ |+.||.+.... ..........
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~~~---------------- 221 (261)
T cd05034 160 AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR--EVLEQVERGY---------------- 221 (261)
T ss_pred hhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC----------------
Confidence 1122235678999999998889999999999999999999 99998653211 1111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
....+..++..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 222 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 222 -RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 001112235678899999999999999999999998875
No 181
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.4e-36 Score=303.82 Aligned_cols=249 Identities=28% Similarity=0.337 Sum_probs=204.5
Q ss_pred CCCCccccccccCceEEEEEEECC-CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
++|+..+.||+|+||.||+|...+ ++.+|+|.+..... .+.+.+|++++++++||||+++++++......++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999999764 88999999865432 678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++......+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~--~ 155 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA--K 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--c
Confidence 999999999876777899999999999999999995 57899999999999999999999999999987644321 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
.....++..|+|||++.+..++.++||||||+++|+|++|+.||........... .. .. .. ..
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~--~~----~~----~~-------~~ 218 (256)
T cd06612 156 RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM--IP----NK----PP-------PT 218 (256)
T ss_pred cccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh--hc----cC----CC-------CC
Confidence 2234578899999999888999999999999999999999999875322111000 00 00 00 00
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..+...+.+++.+||+.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 219 LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 1112234567889999999999999999999975
No 182
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2.7e-36 Score=305.72 Aligned_cols=251 Identities=24% Similarity=0.361 Sum_probs=189.6
Q ss_pred cccccCceEEEEEEECC---CCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCC
Q 005278 422 LLGTGSFGSVYKGTLFD---GTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 497 (704)
.||+|+||.||+|...+ +..+|+|.++.... .....+.+|+.++++++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 68999999999998653 45789998865432 334578889999999999999999999999889999999999999
Q ss_pred HHHHHhhCC----CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 498 LEKWLYSHN----YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 498 L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
|.+++.... ...++..+..++.|++.|++||| +.+++||||||+||+++.++.+|++|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~ 158 (269)
T cd05087 82 LKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT 158 (269)
T ss_pred HHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence 999997432 24567778889999999999995 57899999999999999999999999999976543322222
Q ss_pred eccccccccccCCcccCCC-------CCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 574 QTMTIATIGYMAPEYGSEG-------IISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.....++..|+|||++... .++.++||||||+++|||++ |+.||......+. ..+.. ........++
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~~---~~~~~~~~~~ 233 (269)
T cd05087 159 PDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYTV---REQQLKLPKP 233 (269)
T ss_pred CCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHHh---hcccCCCCCC
Confidence 2334578899999987532 35789999999999999996 9999975432211 11100 0000011111
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. ....+..+.+++..|+ .+|++||+++||++.|+
T Consensus 234 ~~---------~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 234 RL---------KLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred cc---------CCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11 1122345777999998 58999999999998774
No 183
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.9e-36 Score=304.52 Aligned_cols=250 Identities=30% Similarity=0.494 Sum_probs=204.4
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 357888899999999999999864 88999999876543 4567899999999999999999999999889999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++++|.+++.... ..+++..+..++.|++.|+.|| |+.+++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---h~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~-- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYL---EEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD-- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCccchhcccceEEEeCCCCEEEcccccccccccccc--
Confidence 9999999997554 3589999999999999999999 567899999999999999999999999999987632211
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
....+..|+|||++.+..++.++||||||+++||+++ |..||...... .+...... ..
T Consensus 158 ---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~----~~------------ 216 (256)
T cd05039 158 ---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPHVEK----GY------------ 216 (256)
T ss_pred ---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHhc----CC------------
Confidence 2235678999999988889999999999999999997 99998653211 11111110 00
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
....+..++..+.+++.+|++.+|++||++.|++++|+.+
T Consensus 217 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 217 -RMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred -CCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 0011123456788999999999999999999999998753
No 184
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=3.5e-36 Score=303.93 Aligned_cols=252 Identities=24% Similarity=0.291 Sum_probs=200.8
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
++|...+.||+|++|.||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5788999999999999999985 468999999886432 1123568889999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|+||+++++|.+++.... .+++.....++.+++.|+.|| |+.+|+||||+|+||++++++.++|+|||+++.....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~l---H~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~ 157 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTI 157 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecccceecccc
Confidence 999999999999987654 378888999999999999999 5578999999999999999999999999999866432
Q ss_pred CCcce-eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVI-QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
..... .....++..|+|||+..+..++.++||||+|+++||+++|+.||...... ...........
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~--------- 224 (263)
T cd06625 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPT--------- 224 (263)
T ss_pred ccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCC---------
Confidence 21111 12345788999999999988999999999999999999999998653111 11100000000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....+..++..+.+++.+||+.+|++||++.|+++.
T Consensus 225 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 -----NPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -----CCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 001122345567889999999999999999999764
No 185
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.8e-36 Score=313.73 Aligned_cols=240 Identities=21% Similarity=0.260 Sum_probs=189.6
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +|+.||+|+++... ......+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999865 68899999987543 22334566778887765 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||+++...... ....
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRAS 154 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Ccee
Confidence 99999987653 4788899999999999999995 5789999999999999999999999999987532211 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... .......... .+ .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~-----~~~~~~~~~~------~~---------~ 214 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE-----DELFESIRVD------TP---------H 214 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhC------CC---------C
Confidence 45689999999999999999999999999999999999999975321 1111110000 00 0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH-HHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK-DAA 686 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~-ev~ 686 (704)
.+..++.++.+++.+|++.||++||++. ++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 1112345678899999999999999985 554
No 186
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.6e-36 Score=326.94 Aligned_cols=262 Identities=23% Similarity=0.289 Sum_probs=191.6
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--------C
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNI--------D 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~ 484 (704)
..+|...+.||+|+||.||+|... +++.||||++... .....+|+.+++.++||||+++.+++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----PQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----cchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999864 6899999987543 23345799999999999999999887432 2
Q ss_pred eEEEEEeccCCCCHHHHHh---hCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeec
Q 005278 485 FKALVLEFMPNGSLEKWLY---SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFG 560 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfg 560 (704)
..++||||+++ ++.+++. .....+++..+..++.|++.||+||| +.+|+||||||+||+++.++ .+||+|||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeeeccc
Confidence 46689999975 7877775 23456899999999999999999995 57899999999999999665 79999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC-
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG- 638 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~- 638 (704)
+|+.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....+ .+...........
T Consensus 217 la~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 217 SAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTE 292 (440)
T ss_pred cchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCH
Confidence 9987643322 223468999999998765 468999999999999999999999997632211 1111111100000
Q ss_pred ---------cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 ---------LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 ---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+....-+......-....+...+.++.+++.+||+.||++|||+.|+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 0000000000000011112234567899999999999999999999964
No 187
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.7e-36 Score=303.59 Aligned_cols=249 Identities=29% Similarity=0.471 Sum_probs=198.4
Q ss_pred ccccccCceEEEEEEECC----CCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLFD----GTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|.... +..+|+|.+..... ...+.+.+|+++++++.||||+++++++.. +..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeCCC
Confidence 469999999999997532 26899999875543 345678999999999999999999998764 467999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce-e
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI-Q 574 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~-~ 574 (704)
|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||+++.......... .
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~ 155 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT 155 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence 99999998655 5899999999999999999994 57899999999999999999999999999987654332211 1
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....++..|+|||...+..++.++||||||+++||+++ |..||..... .....++....+
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~----------------- 216 (257)
T cd05060 156 TAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER----------------- 216 (257)
T ss_pred cCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc-----------------
Confidence 12234568999999988899999999999999999998 9999976322 222222221110
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
...+..++..+.+++.+||+.+|++||++.++++.|+++.
T Consensus 217 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 256 (257)
T cd05060 217 LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP 256 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence 0112234567889999999999999999999999998763
No 188
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=3.1e-36 Score=304.13 Aligned_cols=251 Identities=26% Similarity=0.435 Sum_probs=193.8
Q ss_pred ccccccCceEEEEEEEC----CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeee-eCCeEEEEEeccC
Q 005278 421 NLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCC-NIDFKALVLEFMP 494 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 494 (704)
+.||+|+||.||+|... ++..||+|.+.... ....+.+.+|+.+++.++||||+++++++. ..+..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999853 24579999875432 334567889999999999999999999775 4556789999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc--c
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS--V 572 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~--~ 572 (704)
+|+|.+++.......++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++.+...... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 157 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVH 157 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcceeec
Confidence 99999999876555788888999999999999994 578999999999999999999999999999865432111 1
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCC-CCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRK-KPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||+..+..++.++|||||||++|||++|+ .||..... ......... .
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~---~-------------- 218 (262)
T cd05058 158 NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQ---G-------------- 218 (262)
T ss_pred ccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhc---C--------------
Confidence 112234677899999998888999999999999999999954 55543211 111111110 0
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.....+..++..+.+++..||+.+|++||++.|+++.|+++.
T Consensus 219 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 219 RRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 001111233567889999999999999999999999998875
No 189
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.5e-36 Score=306.29 Aligned_cols=238 Identities=22% Similarity=0.308 Sum_probs=187.6
Q ss_pred cccccCceEEEEEEECC-------------------------CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceE
Q 005278 422 LLGTGSFGSVYKGTLFD-------------------------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKI 476 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 476 (704)
.||+|+||.||+|.... ...||+|++..........+.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 13588998865544445678889999999999999999
Q ss_pred EeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC----
Q 005278 477 ISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM---- 552 (704)
Q Consensus 477 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~---- 552 (704)
++++.+....++||||+++|+|..++......+++..+..++.|++.|++|| |+++|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~iiH~dlkp~Nill~~~~~~~~ 158 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYL---EDKNLVHGNVCAKNILLARLGLAEG 158 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HcCCccCCCCCcccEEEeccCcccC
Confidence 9999999999999999999999999987666789999999999999999999 567899999999999997643
Q ss_pred ---cEEEeeeccceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHh-hCCCCCCccccccccH
Q 005278 553 ---TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETF-TRKKPTNEIFIGEMSL 627 (704)
Q Consensus 553 ---~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~-tg~~p~~~~~~~~~~~ 627 (704)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||......+ .
T Consensus 159 ~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~--~ 230 (274)
T cd05076 159 TSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE--K 230 (274)
T ss_pred ccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--H
Confidence 3799999988643221 12357788999998765 56899999999999999985 6899987532211 1
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
..+..... ..+......+.+++.+||+.+|++||++.++++.|
T Consensus 231 ~~~~~~~~-------------------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 231 ERFYEKKH-------------------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHhcc-------------------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 11111000 00011124578899999999999999999999876
No 190
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-36 Score=315.72 Aligned_cols=259 Identities=24% Similarity=0.398 Sum_probs=205.2
Q ss_pred CCCCccccccccCceEEEEEEEC--------CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF--------DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNID 484 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 484 (704)
.+|.+.+.||+|+||.||+|+.. .+..||+|.+.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46888899999999999999742 12368999887543 23456788999999999 8999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 005278 485 FKALVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD 549 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~ 549 (704)
..++++||+++|+|.+++.+.. ..+++..+..++.|++.|++|| |+.+|+||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L---H~~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL---ASQKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH---HHCCeeccccccceEEEc
Confidence 9999999999999999997532 3478889999999999999999 457899999999999999
Q ss_pred CCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHH
Q 005278 550 ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLK 628 (704)
Q Consensus 550 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~ 628 (704)
.++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||.+.. ..
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~ 243 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VE 243 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----HH
Confidence 999999999999987654322222222345678999999999999999999999999999998 888886532 22
Q ss_pred HHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 629 HWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
.+........ ....+..++..+.+++.+||+.+|++||++.|+++.|+++...
T Consensus 244 ~~~~~~~~~~--------------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 244 ELFKLLKEGH--------------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHHHHHHcCC--------------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhh
Confidence 2221111000 0011223456788999999999999999999999999998743
No 191
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3.5e-36 Score=302.36 Aligned_cols=249 Identities=21% Similarity=0.290 Sum_probs=201.3
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
+|+..+.||+|+||.||+++.. +++.+|+|.++... ....+.+..|+.+++.++|+||+++.+.+.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999854 68999999986432 334567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++... ...+++.....++.|++.|+.|| |+.+|+|+||||+||++++++.++++|||.+........
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~l---H~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~-- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI---HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA-- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc--
Confidence 999999998753 34578899999999999999999 567899999999999999999999999999987643221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......|++.|+|||++.+..++.++|+||||+++|+|++|..||.... ..............
T Consensus 156 ~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~------------ 218 (255)
T cd08219 156 YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQGSYK------------ 218 (255)
T ss_pred ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcCCCC------------
Confidence 1223468899999999998889999999999999999999999997521 11111111100000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+..++..+.+++.+||+.||++||++.|++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0112334567889999999999999999999754
No 192
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.1e-36 Score=302.72 Aligned_cols=253 Identities=23% Similarity=0.405 Sum_probs=204.3
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.++|...+.||+|+||.||+|...++..+|+|.+... ....+.+.+|++++++++|+||+++.+++.. ...+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 4678889999999999999999877888999988643 2345678899999999999999999999887 6789999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++.+. ....++..+..++.+++.|++||| +.+++|+||+|+||+++.++.+||+|||.+........ .
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~ 158 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 158 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-c
Confidence 999999999754 445788899999999999999995 57899999999999999999999999999987643222 1
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......++..|+|||++.+..++.++|+|||||++|+++| |..||..... .....+......
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~--------------- 221 (260)
T cd05073 159 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYR--------------- 221 (260)
T ss_pred cccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCC---------------
Confidence 1222345678999999998889999999999999999999 8999875321 112222211100
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
.+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 --~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 222 --MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 00112334578899999999999999999999999875
No 193
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2e-36 Score=308.70 Aligned_cols=253 Identities=24% Similarity=0.312 Sum_probs=203.6
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
.++|++.+.||+|+||.||+|... ++..+|+|.+........+.+..|++++++++||||+++++++......++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888999999999999999864 6899999998766555567789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++......+++..+..++.|++.|+.||| +.+|+|+||+|+||+++.++.++|+|||++....... .
T Consensus 84 ~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~--~ 158 (280)
T cd06611 84 CDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL--Q 158 (280)
T ss_pred cCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcccc--c
Confidence 9999999999876667899999999999999999994 5789999999999999999999999999987653321 1
Q ss_pred eeccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 573 IQTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
......+++.|+|||++. +..++.++||||||+++|||++|+.||...... .....+.. ...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~----~~~-------- 225 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILK----SEP-------- 225 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhc----CCC--------
Confidence 123346899999999864 345778999999999999999999999763211 11111100 000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....+..++..+.+++..||+.+|++||++.++++.
T Consensus 226 ----~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 226 ----PTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred ----CCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 0011122345578899999999999999999999654
No 194
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4e-36 Score=310.31 Aligned_cols=252 Identities=24% Similarity=0.278 Sum_probs=209.3
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh---hhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER---ASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 487 (704)
....|+..+.||+|.||.||+++.. +|+.+|+|.+.+.... +.+.+.+|+++|+++. |||||.+.+++.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3457888899999999999999965 5999999999766532 3468999999999998 999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC----CcEEEeeeccce
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN----MTAHVSDFGISK 563 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~----~~~kl~Dfgla~ 563 (704)
+|||++.||.|.+.+... . +++.....++.|++.+++|| |+.+|+|||+||+|+++... +.+|++|||++.
T Consensus 113 lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~l---H~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~ 187 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYL---HSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAK 187 (382)
T ss_pred EEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHH---HhCCceeccCCHHHeeeccccCCCCcEEEeeCCCce
Confidence 999999999999999876 3 89999999999999999999 56899999999999999633 479999999999
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
.... .......+||+.|+|||++....|+..+||||+||++|.|++|..||.+....... .. +.
T Consensus 188 ~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~-~~------------i~ 251 (382)
T KOG0032|consen 188 FIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF-LA------------IL 251 (382)
T ss_pred EccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-HH------------HH
Confidence 8765 23455678999999999999999999999999999999999999999773321111 11 11
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+. ...+.....+..+.+++..++..||.+|+++.++++.
T Consensus 252 ~~~~~---f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 252 RGDFD---FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred cCCCC---CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11110 1112233456778899999999999999999999873
No 195
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.7e-36 Score=315.65 Aligned_cols=241 Identities=24% Similarity=0.272 Sum_probs=187.7
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHH-HHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSEC-EILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||+||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999865 678899999875421 1223334443 456788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+.......++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~l---H~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~~~~ 154 (325)
T cd05602 81 GELFYHLQRER-CFLEPRARFYAAEIASALGYL---HSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--GTTS 154 (325)
T ss_pred CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC--CCcc
Confidence 99999997654 367788888999999999999 56789999999999999999999999999997543221 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~---------------~~ 214 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILNKP---------------LQ 214 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHhCC---------------cC
Confidence 45699999999999999999999999999999999999999975321 11111110000 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+..+.+++.+|++.+|++||++.+.+.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 215 LKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 11133556788999999999999999875443
No 196
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.4e-36 Score=303.77 Aligned_cols=251 Identities=27% Similarity=0.411 Sum_probs=202.3
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
.+|+..+.||+|+||.||+|...+++.+|+|.+.... .....+.+|++++++++|||++++++++......++|+||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 4677788999999999999988778899999886432 234578899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++......+++..+..++.+++.|++||| +.+++||||+|+||+++.++.++|+|||.++........ ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-~~ 158 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYT-SS 158 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCccc-cc
Confidence 99999999876666889999999999999999995 578999999999999999999999999999866432211 11
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....++.+|+|||+..++.++.++||||||+++||+++ |..||..... ....... .... ...
T Consensus 159 ~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~-~~~~-~~~---------- 221 (256)
T cd05112 159 TGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETI-NAGF-RLY---------- 221 (256)
T ss_pred CCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHH-hCCC-CCC----------
Confidence 22345678999999988889999999999999999998 8999865221 1111110 0000 000
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
.+...+..+.+++.+||+.+|++||++.|+++.|
T Consensus 222 --~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 222 --KPRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred --CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 0111345788999999999999999999999887
No 197
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.7e-36 Score=308.93 Aligned_cols=250 Identities=22% Similarity=0.300 Sum_probs=203.2
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+|...+.||+|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36889999999999999999985 47999999998765555567788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++.+. .+++..+..++.+++.|+.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~--~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 170 (297)
T cd06656 98 LAGGSLTDVVTET--CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (297)
T ss_pred cCCCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence 9999999998754 3788899999999999999994 57899999999999999999999999999987643321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......+++.|+|||...+..++.++|||||||++|++++|+.||............+ . .. .+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~-~----~~------------~~ 233 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA-T----NG------------TP 233 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeec-c----CC------------CC
Confidence 1223468899999999998889999999999999999999999996532111100000 0 00 00
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+...+..+.+++.+||+.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 234 ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01112234456788999999999999999999976
No 198
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.4e-36 Score=316.29 Aligned_cols=242 Identities=24% Similarity=0.307 Sum_probs=188.8
Q ss_pred ccccccCceEEEEEEE-CCCCEEEEEEeeccch---hhhHHHHHHHH-HHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE---RASRSFDSECE-ILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+. .+|+.||+|++..... .....+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3699999999999985 4689999999875421 22334555554 56778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|..++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~~ 154 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TTT 154 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--Ccc
Confidence 99999887543 4889999999999999999995 57899999999999999999999999999875422211 223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... .......... .. .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~--------~~-------~ 214 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHK--------PL-------V 214 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcC--------Cc-------c
Confidence 45689999999999999999999999999999999999999965321 1111111100 00 0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....+..+.+++.+|++.+|.+||++++.++.
T Consensus 215 ~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 215 LRPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 011234567789999999999999998644333
No 199
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.7e-36 Score=305.49 Aligned_cols=249 Identities=25% Similarity=0.308 Sum_probs=197.5
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999985 578999999986543 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|..+. .+++..+..++.|++.|++||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~--- 149 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI--- 149 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc---
Confidence 9999997653 2678888999999999999995 5789999999999999999999999999998654321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccccc--HHHHHHhhcCCCcchhccccchhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMS--LKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....|+..|+|||++.+..++.++||||||+++|+|++|+.||......... ...+........ .+..
T Consensus 150 -~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~--- 220 (279)
T cd06619 150 -AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL--- 220 (279)
T ss_pred -ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC---
Confidence 22346899999999999889999999999999999999999999764322211 111111000000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....+.++.+++.+|++.+|++||+++|+++.
T Consensus 221 -----~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 -----PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred -----CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011234567899999999999999999999764
No 200
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-37 Score=316.08 Aligned_cols=243 Identities=26% Similarity=0.412 Sum_probs=196.8
Q ss_pred cccccccCceEEEEEEEC-CCCEEE---EEEeec-cchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe--EEEEEec
Q 005278 420 CNLLGTGSFGSVYKGTLF-DGTNVA---IKVFNL-QLERASRSFDSECEILRSIRHRNLIKIISNCCNIDF--KALVLEF 492 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~-~~~~va---vK~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 492 (704)
..+||+|+|-+||||... +|..|| ||.-.. +.....++|..|+.+|+.|+||||++++++|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 358999999999999854 577776 232111 113345789999999999999999999999988665 7789999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|..|+|..|+.+++. .+......+++||.+||.|||. |.++|||||||-+||+|+ ..|.|||+|.|+|..+....
T Consensus 125 ~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs-~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-- 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHS-QDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-- 200 (632)
T ss_pred ccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhc-CCCCccccccccceEEEcCCcCceeecchhHHHHhhccc--
Confidence 999999999998765 7888999999999999999999 789999999999999998 56899999999999875432
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.....|||.|||||... ..|+..+||||||++|+||+|+..||........-+.+-.....|..+..+-|
T Consensus 201 --aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~d------- 270 (632)
T KOG0584|consen 201 --AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKD------- 270 (632)
T ss_pred --cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCC-------
Confidence 12368999999999866 78999999999999999999999999875544444444333333443433333
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+++.++|.+|+.. .++||++.|+++
T Consensus 271 ----------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 ----------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred ----------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 3567899999999 999999999953
No 201
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=3.2e-36 Score=318.21 Aligned_cols=259 Identities=20% Similarity=0.271 Sum_probs=199.3
Q ss_pred HHHHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC
Q 005278 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNI 483 (704)
Q Consensus 408 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 483 (704)
.++....++|++.+.||+|+||.||+++.. +++.+|+|++.... ......+.+|+.+++.++||||+++++++.+.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344455689999999999999999999865 68899999986432 22345578899999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
+..++||||+++|+|.+++.... ++...+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||++.
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~L---H~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~ 190 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAI---HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHH---HHCCEEeCCCCHHHEEECCCCCEEEEeCCcee
Confidence 99999999999999999987543 78888889999999999999 56789999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCC----CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCc
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEG----IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
.+..... .......||+.|+|||++... .++.++|||||||++|||++|+.||...... ..+..+.... ...
T Consensus 191 ~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~--~~~ 266 (371)
T cd05622 191 KMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHK--NSL 266 (371)
T ss_pred EcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH-HHHHHHHcCC--Ccc
Confidence 7643221 122345699999999987653 3788999999999999999999999752210 0111111000 000
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQ--RVSMKDAAAK 688 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~ev~~~ 688 (704)
..+.....+..+.+++..|++..|.+ ||++.|+++.
T Consensus 267 -------------~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 267 -------------TFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred -------------cCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 01111234566788999999844433 6788888764
No 202
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.1e-36 Score=311.94 Aligned_cols=243 Identities=19% Similarity=0.253 Sum_probs=191.6
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|++..... ...+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999864 688999999976432 2345678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--DTTS 154 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC--Ccee
Confidence 99999887554 4899999999999999999995 5789999999999999999999999999987532211 1123
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccc-cccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG-EMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ......+........ ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--------------~~ 220 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--------------PI 220 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--------------CC
Confidence 456899999999999999999999999999999999999999653221 111122211111110 00
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
..+...+..+.+++.+|++.||++||++.
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 11223345678899999999999999854
No 203
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=9.3e-36 Score=300.63 Aligned_cols=253 Identities=24% Similarity=0.311 Sum_probs=204.6
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
++|+..+.||+|+||.||+|... +++.+|+|.+........+.+.+|++++++++||||+++++++.+....+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999864 67889999997665555678999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++......++...+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||++........ .
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--~ 157 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA--K 157 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--c
Confidence 999999999876566899999999999999999994 57899999999999999999999999999876543211 1
Q ss_pred eccccccccccCCcccCCC---CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 574 QTMTIATIGYMAPEYGSEG---IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....++..|+|||...+. .++.++||||||+++|||+||+.||......... ..... .... ..
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~----~~~~---~~----- 224 (262)
T cd06613 158 RKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISK----SNFP---PP----- 224 (262)
T ss_pred cccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHh----ccCC---Cc-----
Confidence 2234678899999998776 8889999999999999999999998763321111 00000 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
........+.++.+++.+||+.+|.+||++.||+.
T Consensus 225 --~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 225 --KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00112234567889999999999999999999974
No 204
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.7e-36 Score=304.06 Aligned_cols=248 Identities=29% Similarity=0.486 Sum_probs=194.2
Q ss_pred ccccccCceEEEEEEEC-CCC--EEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGT--NVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. ++. .+|+|.+.... ......+.+|+++++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999865 343 46888876432 33446788999999999 799999999999999999999999999
Q ss_pred CCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeec
Q 005278 496 GSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560 (704)
Q Consensus 496 gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 560 (704)
|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.+|++|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECCCC
Confidence 99999997432 24788999999999999999995 5789999999999999999999999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCc
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
++..... .........+..|+|||+.....++.++|||||||++|||++ |..||..... ....... +...
T Consensus 158 l~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~~~~~~-~~~~ 228 (270)
T cd05047 158 LSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKL-PQGY 228 (270)
T ss_pred Cccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HHHHHHH-hCCC
Confidence 9863221 111112234677999999988889999999999999999997 9999865321 1111111 1100
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
....+..++..+.+++.+||+.+|.+||++.|+++.|+++.
T Consensus 229 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 -------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------------CCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 00011123456889999999999999999999999998764
No 205
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1.1e-35 Score=307.14 Aligned_cols=264 Identities=22% Similarity=0.262 Sum_probs=202.5
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||.||++... ++..+|+|.+.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46888999999999999999854 68889999886543 23345688999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++... ..+++..+..++.|+++|++|||+ ..+++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--- 154 (308)
T cd06615 81 MDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 154 (308)
T ss_pred cCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc---
Confidence 9999999999865 347889999999999999999964 2579999999999999999999999999987653221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcc------------
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT------------ 640 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~------------ 640 (704)
.....++..|+|||...+..++.++||||||+++|||++|+.||.... ......+..........
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 155 -ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred -cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCCC
Confidence 223468899999999888889999999999999999999999986432 11222221111000000
Q ss_pred ---------hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 641 ---------EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 641 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+..+..... .........++.++.+++.+|++.+|++||++.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 232 DSPRPMAIFELLDYIVNE-PPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CccchhhHHHHHHHHhcC-CCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 00000011245678899999999999999999999765
No 206
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=9.9e-36 Score=299.25 Aligned_cols=248 Identities=30% Similarity=0.450 Sum_probs=199.2
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeee-eCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCC-NIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~ 493 (704)
++|...+.||+|+||.||+|... |..||+|.+... ...+.+.+|+.++++++|+|++++++++. .....++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 47888899999999999999754 788999988643 23457889999999999999999999764 456789999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++.... ..+++..+..++.+++.|++|| |+.+++||||||+||++++++.+|++|||++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 83 AKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL---EANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999999998643 3478999999999999999999 56789999999999999999999999999988653321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
....++..|+|||+..+..++.++|||||||++|||++ |+.||... .......... ...
T Consensus 157 --~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~-~~~------------ 216 (256)
T cd05082 157 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVE-KGY------------ 216 (256)
T ss_pred --CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHh-cCC------------
Confidence 12335678999999988889999999999999999998 99998642 1122211110 000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
....+..++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 217 -~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 217 -KMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -CCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 0011123456788999999999999999999999998764
No 207
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.4e-36 Score=320.08 Aligned_cols=265 Identities=22% Similarity=0.220 Sum_probs=199.2
Q ss_pred hCCCCccccccccCceEEEEEEEC---CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF---DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
..+|.+.+.||+|+||.||++... .+..||+|.+... ....+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 3678999987532 34568999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|++. ++|.+++.. ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.......
T Consensus 166 e~~~-~~l~~~l~~-~~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~ 240 (392)
T PHA03207 166 PKYK-CDLFTYVDR-SGPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD 240 (392)
T ss_pred hhcC-CCHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc
Confidence 9995 689898843 345899999999999999999995 57899999999999999999999999999987654433
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccc--ccHHHHHHhhc--CCCcchhcccc
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGE--MSLKHWVKESL--PDGLTEVVDAN 646 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~ 646 (704)
........||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ..+....+... +..+.......
T Consensus 241 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~ 320 (392)
T PHA03207 241 TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTN 320 (392)
T ss_pred cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchh
Confidence 333334579999999999999999999999999999999999999986633221 11111111110 00000000000
Q ss_pred c-----------hh--hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 647 L-----------VR--EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 647 ~-----------~~--~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+ .. ..+........+.++.+++.+|++.||++||++.|++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 321 LCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred HHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0 00 000000011234567889999999999999999999754
No 208
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.6e-36 Score=320.85 Aligned_cols=264 Identities=19% Similarity=0.224 Sum_probs=197.8
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+|.+.+.||+|+||.||+|... .++.||||... ...+.+|++++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999865 58899999632 23456899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+. ++|.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++.........
T Consensus 242 ~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yL---H~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~ 317 (461)
T PHA03211 242 YR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYI---HGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTP 317 (461)
T ss_pred cC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccc
Confidence 95 799999887666799999999999999999999 55789999999999999999999999999998764322222
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccc---c---ccHHHHHHhhcC--CCcchhcc
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIG---E---MSLKHWVKESLP--DGLTEVVD 644 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~---~---~~~~~~~~~~~~--~~~~~~~~ 644 (704)
......||+.|+|||++.+..++.++|||||||++|||++|..|+-..... . ..+...+..... ..+.....
T Consensus 318 ~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~ 397 (461)
T PHA03211 318 FHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAG 397 (461)
T ss_pred cccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcc
Confidence 223456999999999999999999999999999999999988764322111 0 111222221110 00000000
Q ss_pred ccchhhh--------------hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVREE--------------QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~--------------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+.... ............+.+++.+||+.||.+|||+.|+++
T Consensus 398 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~ 454 (461)
T PHA03211 398 SRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLR 454 (461)
T ss_pred hHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhh
Confidence 0000000 000001122346788999999999999999999975
No 209
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-37 Score=314.76 Aligned_cols=245 Identities=25% Similarity=0.362 Sum_probs=202.2
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHH
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLE 499 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 499 (704)
-++|+|.||+||-|+.. +...+|||-+.....+....+.+|+..-++++|.|||+++|.+.+.+..-+.||-++||+|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 37999999999999954 56679999998777777778999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcc--CHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEeeeccceecCCCCCcceecc
Q 005278 500 KWLYSHNYFL--GILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 500 ~~l~~~~~~~--~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+.++..-.++ .+.+.--+..||.+||.||| +..|||||||-+|||++ -.|.+||+|||.++.+.. .+..+..
T Consensus 661 sLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg--inP~TET 735 (1226)
T KOG4279|consen 661 SLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG--INPCTET 735 (1226)
T ss_pred HHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhcc--CCccccc
Confidence 9998664445 56677778899999999995 56699999999999997 578999999999987743 2333455
Q ss_pred ccccccccCCcccCCCC--CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGI--ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
..||..|||||++..+. |+.++|||||||++.||.||++||-.+....- .++..++-.. -.
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqA---------------AMFkVGmyKv--HP 798 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQA---------------AMFKVGMYKV--HP 798 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhH---------------hhhhhcceec--CC
Confidence 67999999999998764 88999999999999999999999976432211 1111222111 12
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.+++.+.+...++.+|+.+||.+||+|+++++
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 456677888999999999999999999999964
No 210
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.5e-36 Score=302.62 Aligned_cols=252 Identities=24% Similarity=0.311 Sum_probs=199.1
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
++|...+.||+|+||.||+|+. .+++.||+|.++.........+.+|+.+++.++||||+++++.+...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4677888999999999999985 468999999987654444566889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++...+ .+++..+..++.|++.|++||| +.+++|+||||+||+++.++.++|+|||++....... ..
T Consensus 89 ~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--~~ 162 (267)
T cd06645 89 GGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--AK 162 (267)
T ss_pred CCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--cc
Confidence 9999999987554 4889999999999999999995 5689999999999999999999999999997664322 11
Q ss_pred eccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 574 QTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....|++.|+|||++. ...++.++|||||||++|||++|+.||........ ...... .... .+..
T Consensus 163 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~----~~~~---~~~~--- 231 (267)
T cd06645 163 RKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTK----SNFQ---PPKL--- 231 (267)
T ss_pred cccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhc----cCCC---CCcc---
Confidence 23446899999999874 45688899999999999999999999865322111 000000 0000 0000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....++..+.+++.+|++.+|++||+++++++
T Consensus 232 ----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 ----KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ----cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 001123446788999999999999999999875
No 211
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7e-37 Score=281.65 Aligned_cols=253 Identities=27% Similarity=0.359 Sum_probs=203.5
Q ss_pred HHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch--------hhhHHHHHHHHHHHhc-CCCCCceEEeeee
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE--------RASRSFDSECEILRSI-RHRNLIKIISNCC 481 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 481 (704)
...+.|+..+.+|.|..++|.++.. .+|...|+|++..... .-.+.-.+|+.+++++ .||+|+++.++++
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 3456788888999999999998874 4789999999864321 1234567899999998 6999999999999
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 482 NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 482 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
.+...++|+|.|+.|.|.+++.+.. .+++....+|++|+..|++|| |.+.|||||+||+|||+|++.++||+|||+
T Consensus 94 s~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeyl---Ha~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 94 SDAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYL---HARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred CcchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHH---HHhhhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999998654 388999999999999999999 668899999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccC------CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGS------EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
|+.+.++.. ....+|||+|+|||.+. ...|+..+|+|+.||+||.++.|.+||-... .+.+...+
T Consensus 170 a~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk--QmlMLR~I---- 240 (411)
T KOG0599|consen 170 ACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK--QMLMLRMI---- 240 (411)
T ss_pred eeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH--HHHHHHHH----
Confidence 998866543 45568999999999763 3458889999999999999999999985411 11111100
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.++ .+. ...+.+.+.+....+++.+|++.||++|.|++|+++
T Consensus 241 meG-------kyq---F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 241 MEG-------KYQ---FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred Hhc-------ccc---cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 001 000 122344566777889999999999999999999975
No 212
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=299.92 Aligned_cols=247 Identities=23% Similarity=0.336 Sum_probs=208.9
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.=|...+.||+|.|+.|-+|+ ..+|+.||||++.+.. .-....+.+|++.|+-++|||||+++++...+...|+|.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 456777889999999999998 4689999999997654 3345678899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEeeeccceecCCCCC
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-~~~~~kl~Dfgla~~~~~~~~ 570 (704)
.=.+|+|++|+-++...+.+....+++.||..|+.|+|+.| +||||+||+||.+- .-|-+|++|||++-.+.++..
T Consensus 98 LGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~k 174 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKK 174 (864)
T ss_pred ecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCCcch
Confidence 99999999999998888999999999999999999997766 99999999999875 678899999999987755442
Q ss_pred cceeccccccccccCCcccCCCCCCc-ccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISP-KSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
....+|...|-|||++.+..|+. ++||||+||++|.+++|+.||+...+.+. +.-++|=.+
T Consensus 175 ---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCKY-- 236 (864)
T KOG4717|consen 175 ---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCKY-- 236 (864)
T ss_pred ---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcccc--
Confidence 34568999999999999888775 68999999999999999999987543321 222223221
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+...+.+..++|..|+..||++|.+.+||+.
T Consensus 237 -----tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 -----TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -----cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 234566788899999999999999999999864
No 213
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.1e-36 Score=308.30 Aligned_cols=249 Identities=21% Similarity=0.309 Sum_probs=202.4
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.+|+..+.||.|++|.||+|.. .+++.||+|.+........+.+.+|+..++.++||||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688899999999999999985 578999999987655455677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++... .+++..+..++.+++.|++|| |+.+++||||+|+||+++.++.+||+|||++........ .
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~L---H~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~--~ 171 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFL---HANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS--K 171 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--c
Confidence 999999988754 378999999999999999999 557899999999999999999999999999886543221 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
.....++..|+|||.+.+..++.++|||||||++|++++|+.||........ . ......... .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~-~~~~~~~~~---------------~ 234 (296)
T cd06655 172 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-L-YLIATNGTP---------------E 234 (296)
T ss_pred CCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-H-HHHHhcCCc---------------c
Confidence 2234688999999999988899999999999999999999999966322111 1 111000000 0
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..++..+.+++.+||+.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 1112234556888999999999999999999953
No 214
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.8e-36 Score=312.07 Aligned_cols=255 Identities=21% Similarity=0.259 Sum_probs=195.6
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999854 68999999987532 223456888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.+....+++..+..++.|++.|++|| |+++|+||||||+||+++.++.+||+|||++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSV---HQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999999987666689999999999999999999 567899999999999999999999999999976643322
Q ss_pred cceeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 571 SVIQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+......... .
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i~~~~--~---- 225 (331)
T cd05597 158 -VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHK--E---- 225 (331)
T ss_pred -ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHHHcCC--C----
Confidence 11223468999999998763 4578899999999999999999999965211 11111110000 0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCC--CCCCCCCHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCME--SPEQRVSMKDAAAK 688 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~--~P~~Rpt~~ev~~~ 688 (704)
... .......++..+.+++.+|+.. ++..||++.++++.
T Consensus 226 ~~~----~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 226 HFQ----FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ccc----CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 000 0001112345667788887654 33347889888654
No 215
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-35 Score=301.38 Aligned_cols=251 Identities=22% Similarity=0.336 Sum_probs=188.0
Q ss_pred cccccCceEEEEEEECC---CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCC
Q 005278 422 LLGTGSFGSVYKGTLFD---GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 497 (704)
.||+|+||.||+|+..+ ...+|+|.+.... ......+.+|++.++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997543 4568888775433 2334568899999999999999999999999999999999999999
Q ss_pred HHHHHhhCC----CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 498 LEKWLYSHN----YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 498 L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
|.+++.... ...++.....++.|++.|++|| |+.+|+||||||+||++++++.+||+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL---HQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHH---HhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 999997543 2246777889999999999999 557899999999999999999999999999876433222222
Q ss_pred eccccccccccCCcccC-------CCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 574 QTMTIATIGYMAPEYGS-------EGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.....+++.|+|||+.. ...++.++|||||||++|||++ |..||......+ .+..... ........+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~----~~~~~~~~~ 233 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR----EQDIKLPKP 233 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh----ccCccCCCC
Confidence 23345678899999863 3457889999999999999999 778886532211 1111111 111111111
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
. .+..++..+.+++..|| .||++||+++||++.|.
T Consensus 234 ~---------~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 234 Q---------LDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred c---------ccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 11133456677888898 59999999999998863
No 216
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.2e-36 Score=305.25 Aligned_cols=248 Identities=26% Similarity=0.469 Sum_probs=196.9
Q ss_pred ccccccCceEEEEEEECC-------CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 421 NLLGTGSFGSVYKGTLFD-------GTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+.||+|+||.||+|+..+ +..+|+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999876543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-----cEEEeeecc
Q 005278 493 MPNGSLEKWLYSH------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-----TAHVSDFGI 561 (704)
Q Consensus 493 ~~~gsL~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-----~~kl~Dfgl 561 (704)
+++|+|.+++... ...+++..+..++.|++.|++||| +.+++|+||+|+||+++.++ .++++|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999742 234788999999999999999995 57899999999999999877 899999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcc
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLT 640 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 640 (704)
+................++..|+|||++.++.++.++|||||||++|||+| |..||...... .....+.. .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~---~--- 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ--EVLQHVTA---G--- 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH--HHHHHHhc---C---
Confidence 986644332222233346788999999999999999999999999999998 99998653211 11111110 0
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.....+..++..+.+++.+||+.+|++||++++|.+.|+
T Consensus 230 -----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 -----------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -----------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 001112234567889999999999999999999999886
No 217
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.7e-36 Score=305.13 Aligned_cols=240 Identities=23% Similarity=0.367 Sum_probs=189.5
Q ss_pred ccccccCceEEEEEEECC--------CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 421 NLLGTGSFGSVYKGTLFD--------GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+.||+|+||.||+|.... ...+|+|.+........+.+.+|+.+++.+.||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999997532 234888887655444556788999999999999999999999998999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc--------EEEeeecccee
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT--------AHVSDFGISKL 564 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~--------~kl~Dfgla~~ 564 (704)
+++|+|.+++......+++..+..++.|++.|++|| |+.+|+||||||+||+++.++. ++++|||++..
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l---H~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~ 157 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFL---EDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISIT 157 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCccceEEEecccccccCCCceEEecccccccc
Confidence 999999999987766789999999999999999999 5678999999999999987765 69999998875
Q ss_pred cCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCC-CCCCccccccccHHHHHHhhcCCCcchh
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRK-KPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
... .....++..|+|||++.+ ..++.++|||||||++||+++|. .|+....... ...... .
T Consensus 158 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~--~~~~~~----~----- 220 (258)
T cd05078 158 VLP------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQK--KLQFYE----D----- 220 (258)
T ss_pred cCC------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHH--HHHHHH----c-----
Confidence 432 123457889999999876 45789999999999999999985 5554321110 000000 0
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
....+.....++.+++.+||+.+|++||+++|+++.|+
T Consensus 221 ----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ----------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ----------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00011122356789999999999999999999998863
No 218
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3.3e-36 Score=312.92 Aligned_cols=237 Identities=23% Similarity=0.277 Sum_probs=185.7
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHH-HHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSEC-EILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|+.. +++.||+|++..... .....+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999864 689999999875421 2233444454 467889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~~ 154 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETTS 154 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Cccc
Confidence 99998887543 4788888899999999999995 5789999999999999999999999999987532221 1223
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...||+.|+|||++.+..++.++|||||||++|||++|+.||.... ............ ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~---------------~~ 214 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILHKP---------------LQ 214 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhcCC---------------CC
Confidence 4568999999999998899999999999999999999999997532 111111111000 00
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
.+...+..+.+++.+|++.||++||++.
T Consensus 215 ~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 215 LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 1112345678899999999999999764
No 219
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.6e-36 Score=307.57 Aligned_cols=265 Identities=19% Similarity=0.264 Sum_probs=200.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|...+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57888999999999999999864 68899999986543 22345677899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++ ++|.+++......+++..+..++.|+++|++|| |+.+|+||||||+||++++++.++|+|||++........
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYC---HRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK-- 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC--
Confidence 97 599999987666789999999999999999999 567899999999999999999999999999976533221
Q ss_pred eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC----Ccchhccccc
Q 005278 573 IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD----GLTEVVDANL 647 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 647 (704)
......+++.|+|||++.+ ..++.++|||||||++|||+||+.||......+ ....+...... .+........
T Consensus 160 ~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 160 TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhhhcccc
Confidence 1223457889999998765 457889999999999999999999997532211 11111111110 0111111000
Q ss_pred hhhh--h------hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREE--Q------AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~--~------~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.... + .......++..+.+++.+|++.||.+|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0000 0 00011234556789999999999999999999976
No 220
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=6.5e-36 Score=317.22 Aligned_cols=266 Identities=22% Similarity=0.257 Sum_probs=196.4
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----eEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID-----FKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 487 (704)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999985 479999999986432 233457889999999999999999999998776 789
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+|+||+. ++|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~L---H~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~ 155 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYL---HSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEP 155 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeCCCCChHHEEECCCCCEEeccccceeeccc
Confidence 9999996 58888876543 488999999999999999999 557899999999999999999999999999986543
Q ss_pred CCCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh----
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV---- 642 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---- 642 (704)
... .......+++.|+|||++.+. .++.++||||+||++|||++|+.||.+..... .+...............
T Consensus 156 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~ 233 (372)
T cd07853 156 DES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSAC 233 (372)
T ss_pred Ccc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhh
Confidence 221 122334678999999988764 47899999999999999999999997632211 01110000000000000
Q ss_pred ------cccc-ch--hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 643 ------VDAN-LV--REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 643 ------~~~~-~~--~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+... .. ............+.++.+++.+|++.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 234 EGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 0000 00 0000000111235678899999999999999999999753
No 221
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1e-35 Score=314.33 Aligned_cols=262 Identities=20% Similarity=0.247 Sum_probs=195.1
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID----- 484 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 484 (704)
..++|+..+.||+|+||.||++.. .+|+.||||++.... ......+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999985 468999999986432 233456788999999999999999999986543
Q ss_pred -eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 485 -FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 485 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
..++||||+++ ++.+.+.. .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~L---H~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~ 171 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 171 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEecCCCcc
Confidence 47899999975 66666643 277888999999999999999 56789999999999999999999999999997
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh--hcCCCcch
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE--SLPDGLTE 641 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~--~~~~~~~~ 641 (704)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ...|... ........
T Consensus 172 ~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~----~~~~~~~~~~~~~~~~~ 244 (359)
T cd07876 172 TACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDH----IDQWNKVIEQLGTPSAE 244 (359)
T ss_pred ccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCcHH
Confidence 64322 112334689999999999999999999999999999999999999975321 1111110 00000000
Q ss_pred hc-----------c--ccchhhh-----------hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 642 VV-----------D--ANLVREE-----------QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 642 ~~-----------~--~~~~~~~-----------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.. . +...... ............+.+++.+|++.||++|||+.|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 245 FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 0 0000000 0000011124567899999999999999999999763
No 222
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=2.7e-36 Score=318.60 Aligned_cols=201 Identities=23% Similarity=0.359 Sum_probs=173.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+++.. +++.||+|++.... ......+..|+.++..++||+|+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999864 68999999987532 223456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.++|+|||++..+.....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~l---H~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~ 156 (360)
T cd05627 81 EFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAI---HQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHR 156 (360)
T ss_pred eCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccc
Confidence 9999999999997654 488899999999999999999 568899999999999999999999999999875532110
Q ss_pred c---------------------------------ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCC
Q 005278 571 S---------------------------------VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPT 617 (704)
Q Consensus 571 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~ 617 (704)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf 236 (360)
T cd05627 157 TEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPF 236 (360)
T ss_pred cccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCC
Confidence 0 0011346999999999999999999999999999999999999999
Q ss_pred Cc
Q 005278 618 NE 619 (704)
Q Consensus 618 ~~ 619 (704)
..
T Consensus 237 ~~ 238 (360)
T cd05627 237 CS 238 (360)
T ss_pred CC
Confidence 75
No 223
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=5.3e-36 Score=311.21 Aligned_cols=242 Identities=21% Similarity=0.250 Sum_probs=191.7
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 490 (704)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|..+++.+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677789999999999999854 68999999987543 223345778888888885 577888999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG- 155 (323)
T ss_pred cCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-
Confidence 9999999999987654 3889999999999999999995 5789999999999999999999999999987543221
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+. ...
T Consensus 156 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~---~~~------------ 217 (323)
T cd05615 156 -VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED--ELFQSIM---EHN------------ 217 (323)
T ss_pred -ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHH---hCC------------
Confidence 1123346899999999999889999999999999999999999999763211 1111111 000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
...+..++.++.+++.+|++.+|++|++..
T Consensus 218 ---~~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 218 ---VSYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred ---CCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 011123345678899999999999999853
No 224
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=9.1e-36 Score=301.22 Aligned_cols=251 Identities=24% Similarity=0.331 Sum_probs=199.6
Q ss_pred CCCccccccccCceEEEEEEECCCCEEEEEEeeccc------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
+|...+.||+|+||+||+|...+++.+|+|.+.... ......+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477888999999999999998889999999886432 12335688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+|+|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 156 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVG 156 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcc
Confidence 99999999999997654 4788999999999999999995 5779999999999999999999999999987653211
Q ss_pred C----cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 570 D----SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 570 ~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
. ........++..|+|||+..+..++.++|||||||++||+++|+.||...... .............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~----~~~~~~~~~~~~~----- 227 (265)
T cd06631 157 LHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL----AAMFYIGAHRGLM----- 227 (265)
T ss_pred ccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH----HHHHHhhhccCCC-----
Confidence 1 11122345899999999999888999999999999999999999999653211 1110000000000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..++..+.+++.+||+.+|++||++.|+++
T Consensus 228 --------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 --------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred --------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011234566788999999999999999999864
No 225
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.1e-36 Score=306.18 Aligned_cols=255 Identities=24% Similarity=0.296 Sum_probs=203.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||+||++... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 56788899999999999999854 68999999876543 33456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+++.+.+ .+++.....++.+++.|+.|||+ ..+++||||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 85 MDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred CCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999999887643 47899999999999999999974 3479999999999999999999999999987543221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccc------cHHHHHHhhcCCCcchhcccc
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEM------SLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 646 (704)
.....|+..|+|||++.+..++.++|||||||++|+++||+.||......+. ....+........
T Consensus 159 -~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 229 (284)
T cd06620 159 -ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-------- 229 (284)
T ss_pred -cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc--------
Confidence 1234689999999999888899999999999999999999999986432210 1111111111000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
........++..+.+++.+|++.||++||++.|++++.
T Consensus 230 -----~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 -----PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred -----CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 00001112456788999999999999999999998864
No 226
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=9.8e-36 Score=303.99 Aligned_cols=249 Identities=23% Similarity=0.275 Sum_probs=197.2
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
|+..+.||+|+||+||+|... +++.+|+|.+..... .....+.+|+++++.++|+||+++.+++...+..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 566788999999999999864 689999999865431 2234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..+..++.|++.|+.|| |+.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDL---HRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 9999999988754 34589999999999999999999 567899999999999999999999999999976543221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.....|+..|+|||++.+..++.++|+|||||++||+++|..||....... ....+.. ......
T Consensus 158 --~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~-~~~~~~~-~~~~~~------------ 221 (285)
T cd05632 158 --IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV-KREEVDR-RVLETE------------ 221 (285)
T ss_pred --ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hhhccc------------
Confidence 223468999999999988899999999999999999999999997532111 1111111 111100
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
......++..+.+++..|++.||++||+ +.|+++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 222 --EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred --cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 0011123456788999999999999999 566655
No 227
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1e-35 Score=302.43 Aligned_cols=248 Identities=26% Similarity=0.309 Sum_probs=201.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||.|++|.||+|+.. +++.||+|.+.... ......+.+|+++++.++|+||+++++++.+....++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36788899999999999999865 68999999987553 33446788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++... .+++..+..++.|++.|+.|| |+.+++||||+|+||++++++.++++|||+++.......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 153 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYL---HEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS-- 153 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEcccccceeeccccc--
Confidence 9999999999865 589999999999999999999 557899999999999999999999999999988754321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......+++.|+|||+..+..++.++||||||+++|||+||+.||....... ... ...... .+...
T Consensus 154 ~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~-----~~~-~~~~~~----~~~~~---- 219 (274)
T cd06609 154 KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR-----VLF-LIPKNN----PPSLE---- 219 (274)
T ss_pred ccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH-----HHH-HhhhcC----CCCCc----
Confidence 1233468889999999998889999999999999999999999997532111 000 000000 00000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...++..+.+++..||..+|++||+++++++
T Consensus 220 ----~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 ----GNKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----ccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0014556888999999999999999999965
No 228
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.2e-35 Score=303.18 Aligned_cols=249 Identities=23% Similarity=0.298 Sum_probs=197.7
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
|+..+.||+|+||.||++... +++.||||.+.... ......+..|+.++++++|++++.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 666789999999999999854 68999999986542 12234577899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..+..++.|++.|+.|| |+.+|+||||||+||+++.++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~l---H~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDL---HQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT- 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc-
Confidence 9999999998643 34588999999999999999999 467899999999999999999999999999976543221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+ .... ....
T Consensus 158 --~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~-~~~~~-~~~~-~~~~----------- 221 (285)
T cd05630 158 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEV-ERLV-KEVQ----------- 221 (285)
T ss_pred --ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc-hHHHH-Hhhh-hhhh-----------
Confidence 123468999999999999999999999999999999999999997632211 00010 0000 0000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
......++..+.+++..||+.||++||+ +.|+++
T Consensus 222 --~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 --EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0011234556789999999999999999 788865
No 229
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.5e-36 Score=335.67 Aligned_cols=255 Identities=22% Similarity=0.286 Sum_probs=198.7
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCe
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCN--IDF 485 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 485 (704)
....++|.+.+.||+|+||+||+|+.. ++..+|+|.+.... ......+..|+.++++++||||++++++|.. ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 445578999999999999999999864 57889999886432 3345678899999999999999999998855 456
Q ss_pred EEEEEeccCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcC----CCCcEecCCCCCCeeeCC--------
Q 005278 486 KALVLEFMPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGH----STPMVHCDLKPNNILLDE-------- 550 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h----~~~ivH~dlk~~Nil~~~-------- 550 (704)
.++||||+++|+|.+++... ...+++..++.|+.||+.||+|||... ..+||||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999742 345899999999999999999998632 256999999999999964
Q ss_pred ---------CCcEEEeeeccceecCCCCCcceeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 551 ---------NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 551 ---------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
.+.+||+|||++..+..... .....||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 23589999999987643221 233468999999998754 4588999999999999999999999965
Q ss_pred cccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 620 IFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ....+....... +.+ .....+..+.+++..||+.+|.+||++.|+++
T Consensus 246 ~~----~~~qli~~lk~~-------p~l--------pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 AN----NFSQLISELKRG-------PDL--------PIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CC----cHHHHHHHHhcC-------CCC--------CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21 122221111000 000 01123456889999999999999999999984
No 230
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=5.5e-36 Score=304.11 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=197.6
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC------
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNI------ 483 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~------ 483 (704)
.+.+.|+..+.||+|+||.||+|... +++.||+|.+.... .....+..|+.+++++ +||||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35667888899999999999999854 68899999986542 3345788999999998 799999999998653
Q ss_pred CeEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 484 DFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
...++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||+|+||++++++.++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Dfg~~ 158 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVS 158 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence 4578999999999999999864 345889999999999999999995 578999999999999999999999999999
Q ss_pred eecCCCCCcceeccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC
Q 005278 563 KLLGEGDDSVIQTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD 637 (704)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 637 (704)
....... .......|++.|+|||++. +..++.++|||||||++|||++|+.||...... ..+... ..
T Consensus 159 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~----~~~~~~--~~ 230 (272)
T cd06637 159 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM----RALFLI--PR 230 (272)
T ss_pred eeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH----HHHHHH--hc
Confidence 8654321 1223346899999999875 345788999999999999999999998653211 111100 00
Q ss_pred CcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 638 GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. ..+. .....++..+.+++.+||+.+|.+||++.|+++
T Consensus 231 ~----~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 N----PAPR--------LKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred C----CCCC--------CCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 0000 011123456889999999999999999999964
No 231
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=7.7e-36 Score=305.39 Aligned_cols=261 Identities=21% Similarity=0.287 Sum_probs=201.5
Q ss_pred cchHHHHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeee-
Q 005278 405 TSYLDIQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCC- 481 (704)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~- 481 (704)
..+.++..+.++|+..+.||+|+||.||+|... +++.+|+|++... ......+..|+.+++++ +||||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-HDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-cchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 344556678899999999999999999999854 6889999987543 22345688899999999 6999999999874
Q ss_pred ----eCCeEEEEEeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 482 ----NIDFKALVLEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 482 ----~~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
..+..++||||+++|+|.+++.. ....+++..+..++.|++.|+.|| |+.+|+||||||+||+++.++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---H~~~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHL---HVNKTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHH---HhCCccccCCCHHhEEECCCCCE
Confidence 34568999999999999998863 334578889999999999999999 45789999999999999999999
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHH
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH 629 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~ 629 (704)
+++|||++..+..... ......|++.|+|||++. +..++.++||||+||++|||++|+.||...... ..
T Consensus 164 kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~~ 237 (286)
T cd06638 164 KLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----RA 237 (286)
T ss_pred EEccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----HH
Confidence 9999999987643221 122346899999999875 345788999999999999999999998653211 11
Q ss_pred HHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 630 WVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+.. ......... ..+..++..+.+++.+||+.+|++||++.|+++.
T Consensus 238 ~~~-~~~~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 238 LFK-IPRNPPPTL------------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred Hhh-ccccCCCcc------------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 100 000000000 0111234568889999999999999999999764
No 232
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-35 Score=298.23 Aligned_cols=238 Identities=23% Similarity=0.393 Sum_probs=189.2
Q ss_pred ccccccCceEEEEEEECC-C----------CEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 421 NLLGTGSFGSVYKGTLFD-G----------TNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
+.||+|+||.||+|...+ + ..+++|.+...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 368999999999998654 3 25778876544332 6788999999999999999999999887 778999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-------cEEEeeeccc
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-------TAHVSDFGIS 562 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-------~~kl~Dfgla 562 (704)
|||+++|+|.+++......+++..+..++.|++.|++|| |+.+|+||||||+||+++.++ .+|++|||++
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~L---H~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a 155 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYL---EDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIP 155 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHH---hhCCeecccCccceEEEecCccccCCceeEEeCCCCcc
Confidence 999999999999987665689999999999999999999 568899999999999999887 7999999999
Q ss_pred eecCCCCCcceeccccccccccCCcccCCC--CCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCc
Q 005278 563 KLLGEGDDSVIQTMTIATIGYMAPEYGSEG--IISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
..... .....++..|+|||++.+. .++.++||||||+++||+++ |..||...... ....+... ..
T Consensus 156 ~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~---~~- 223 (259)
T cd05037 156 ITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQD---QH- 223 (259)
T ss_pred ccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhc---CC-
Confidence 86543 1223467789999998776 78999999999999999999 57777653211 11111110 00
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. +. .....+.+++.+||..+|++||++.|+++.|+
T Consensus 224 -------~~------~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 224 -------RL------PM--PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred -------CC------CC--CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 00 00156788999999999999999999998763
No 233
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=4.8e-36 Score=302.38 Aligned_cols=252 Identities=31% Similarity=0.418 Sum_probs=198.0
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhh--HHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERAS--RSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~--~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
|+..+.||+|+||+||+++.. +++.+|+|++........ ....+|+.++++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 566789999999999999965 567899999987643322 23456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++... ..+++..+..++.|+++||++||+ .+|+|+||||+||++++++.++|+|||.+.... .....
T Consensus 81 ~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~~~~ 154 (260)
T PF00069_consen 81 PGGSLQDYLQKN-KPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLS--ENNEN 154 (260)
T ss_dssp TTEBHHHHHHHH-SSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEEST--STTSE
T ss_pred cccccccccccc-cccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc--ccccc
Confidence 999999999833 347999999999999999999964 689999999999999999999999999998652 22233
Q ss_pred eccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 574 QTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....++..|+|||+.. +..++.++||||+|+++|+|++|..||..... ............. ... .
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~~~--------~~~---~ 221 (260)
T PF00069_consen 155 FNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKILKR--------PLP---S 221 (260)
T ss_dssp BSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHHHT--------HHH---H
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhcccc--------ccc---c
Confidence 44567899999999988 88899999999999999999999999986410 0011111100000 000 0
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...........+.+++..||+.||++||++.|+++
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000011367899999999999999999999975
No 234
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-35 Score=309.11 Aligned_cols=255 Identities=20% Similarity=0.257 Sum_probs=196.6
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|...+.||+|+||.||+++.. +++.||+|++.... ......+.+|+.++..++|++|+++.+++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999865 68899999986532 223445788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++......+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~l---H~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSI---HQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH---HHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999999987655688999999999999999999 568899999999999999999999999999987643221
Q ss_pred cceeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 571 SVIQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.......||++|+|||++.+ +.++.++|||||||++|||++|+.||..... ........... .
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~------~ 225 (331)
T cd05624 158 -VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHE------E 225 (331)
T ss_pred -eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCC------C
Confidence 12233569999999998765 5678899999999999999999999965211 11111110000 0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQ--RVSMKDAAAK 688 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~ev~~~ 688 (704)
.. .......+.+.++.+++.+|+...|++ |++++++.+.
T Consensus 226 ~~----~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 226 RF----QFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred cc----cCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 00 000011123566788999988865544 4578877653
No 235
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.9e-35 Score=299.44 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=202.3
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35677789999999999999864 58899999987543 34456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++|+|.+++... .+++.....++.+++.|++|| |+.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~l---h~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06640 84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYL---HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI-- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc--
Confidence 9999999998754 378889999999999999999 567899999999999999999999999999987643221
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......++..|+|||++.+..++.++|+|||||++|||+||..||....... .... .... .
T Consensus 157 ~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-----~~~~-~~~~-------------~ 217 (277)
T cd06640 157 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR-----VLFL-IPKN-------------N 217 (277)
T ss_pred ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh-----Hhhh-hhcC-------------C
Confidence 1223457889999999988889999999999999999999999987532211 0000 0000 0
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.......++..+.+++..||+.+|++||++.|+++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 011223456778899999999999999999999766
No 236
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.3e-36 Score=291.13 Aligned_cols=252 Identities=25% Similarity=0.314 Sum_probs=203.5
Q ss_pred CCCCccccccccCceEEEEEEECC-CCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
+.|+..+.||+|.-|+||+++..+ +..+|+|++.+.. .....+.+.|.++|+.+.||.+..+++.++.+...++||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 356677899999999999999764 5899999997654 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC-
Q 005278 491 EFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG- 568 (704)
Q Consensus 491 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~- 568 (704)
|||+||+|+..++++ +..+++..+.-++..+..||+|| |-.|||.|||||+|||+.++|++-|+||.++......
T Consensus 157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYL---HmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~P 233 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYL---HMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSP 233 (459)
T ss_pred ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHH---HhhceeeccCCcceeEEecCCcEEeeeccccccCCCCC
Confidence 999999999999854 56689999999999999999999 6689999999999999999999999999997543110
Q ss_pred -------------------------------C-C---------------------cceeccccccccccCCcccCCCCCC
Q 005278 569 -------------------------------D-D---------------------SVIQTMTIATIGYMAPEYGSEGIIS 595 (704)
Q Consensus 569 -------------------------------~-~---------------------~~~~~~~~gt~~y~aPE~~~~~~~~ 595 (704)
. . .......+||-.|+|||++.+...+
T Consensus 234 t~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg 313 (459)
T KOG0610|consen 234 TLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG 313 (459)
T ss_pred eeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC
Confidence 0 0 0011223689999999999999999
Q ss_pred cccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCC
Q 005278 596 PKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMES 675 (704)
Q Consensus 596 ~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~ 675 (704)
.++|-|+|||++|||+.|..||.+... +..+. .++.+.+ .++.....+..+.++|++.+.+|
T Consensus 314 sAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~------------NIv~~~l-----~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 314 SAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLR------------NIVGQPL-----KFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred chhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHH------------HHhcCCC-----cCCCCCcchhHHHHHHHHHhccC
Confidence 999999999999999999999987432 22222 2222221 12222245677889999999999
Q ss_pred CCCCCC----HHHHHH
Q 005278 676 PEQRVS----MKDAAA 687 (704)
Q Consensus 676 P~~Rpt----~~ev~~ 687 (704)
|++|.. |.||.+
T Consensus 376 P~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKR 391 (459)
T ss_pred hhhhhccccchHHhhc
Confidence 999997 777754
No 237
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=2.1e-35 Score=296.98 Aligned_cols=249 Identities=24% Similarity=0.308 Sum_probs=202.7
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||.++. .+++.+++|.+.... ......+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 478889999999999999984 468999999886543 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++|+|.+++... ...+++..+..++.|++.|++|| |+.+++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYI---HKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 9999999999865 45689999999999999999999 457899999999999999999999999999987644321
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......+++.|+|||+..+..++.++||||||+++|||++|..||..... .............
T Consensus 157 -~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~----------- 219 (256)
T cd08221 157 -MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQGNYT----------- 219 (256)
T ss_pred -cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCCCC-----------
Confidence 22334689999999999888889999999999999999999999865211 1111111111000
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+..++..+.+++.+||+.+|++||++.|+++.
T Consensus 220 ---~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 220 ---PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred ---CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 0112345668889999999999999999999764
No 238
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-35 Score=306.80 Aligned_cols=255 Identities=21% Similarity=0.253 Sum_probs=196.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||+++.. +++.+|+|++.... ......+.+|+.++..++|++|+++.+++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47888999999999999999865 57889999986432 223345888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++|+|.+++.+....+++..+..++.|++.|++||| +.+|+||||||+||+++.++.+||+|||++........
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 999999999999876566899999999999999999995 57899999999999999999999999999976533221
Q ss_pred cceeccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 571 SVIQTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.......||+.|+|||++. ...++.++|||||||++|||++|+.||.... ..+.......... .
T Consensus 158 -~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~-----~~~~~~~i~~~~~-~---- 226 (332)
T cd05623 158 -VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHKE-R---- 226 (332)
T ss_pred -ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC-----HHHHHHHHhCCCc-c----
Confidence 1223356999999999875 3468889999999999999999999997521 1111111110000 0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC--CCCHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQ--RVSMKDAAAK 688 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~--Rpt~~ev~~~ 688 (704)
. ........++..+.+++.+|+..+|++ |+++.|+++.
T Consensus 227 -~----~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 -F----QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -c----cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 000011234566778888887654444 6889988765
No 239
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-35 Score=303.63 Aligned_cols=264 Identities=25% Similarity=0.309 Sum_probs=193.3
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh--hhHHHHHHHHHHHhc---CCCCCceEEeeeee-----CC
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER--ASRSFDSECEILRSI---RHRNLIKIISNCCN-----ID 484 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~ 484 (704)
+|+..+.||+|+||+||+|+.. +++.||+|.++..... ....+.+|+++++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999864 6899999998754321 223556677777665 69999999998864 34
Q ss_pred eEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 485 FKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
..++||||++ ++|.+++... ...+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~ivH~dikp~Nili~~~~~~kl~dfg~~~ 156 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFL---HANCIVHRDLKPENILVTSGGQVKLADFGLAR 156 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence 5789999997 4898888754 34589999999999999999999 55789999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh-cCC--Ccc
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES-LPD--GLT 640 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~--~~~ 640 (704)
...... ......||..|+|||++.+..++.++||||+||++|||++|+.||...... ..+....... .+. .+.
T Consensus 157 ~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07863 157 IYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWP 232 (288)
T ss_pred cccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCc
Confidence 764322 123346889999999998888999999999999999999999998653221 1111111110 000 000
Q ss_pred hhc---cccchhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 EVV---DANLVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 ~~~---~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
... ........ ........++..+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 233 RDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred ccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000 00000000 000111234566789999999999999999999964
No 240
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-35 Score=302.58 Aligned_cols=251 Identities=23% Similarity=0.306 Sum_probs=199.3
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46788899999999999999965 78999999887543 23346788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC--CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 493 MPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
+++++|.+++... ...+++..+..++.+++.|+.|||+ +.+|+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL- 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc-
Confidence 9999999998764 3358999999999999999999963 3589999999999999999999999999997653221
Q ss_pred cceeccccccccccCCcccCCCC------CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGI------ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
.....+++.|+|||.+.+.. ++.++|+|||||++|||++|+.||....... .... .. ...+
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~-~~--------~~~~ 224 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQ-LS--------AIVD 224 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHH-HH--------HHhh
Confidence 22345788999999875543 5789999999999999999999996532111 0000 00 0000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. .....+.+++.++.+++.+|++.+|++||++.++++
T Consensus 225 ~------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 225 G------DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred c------CCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 0 001112235667889999999999999999999976
No 241
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-36 Score=302.58 Aligned_cols=256 Identities=23% Similarity=0.304 Sum_probs=206.6
Q ss_pred HHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEE
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 487 (704)
......|++.++||+||.+.||++...+.+.+|+|++.... ......|.+|+..|.++ .|.+||++++|-..++..|
T Consensus 357 ~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lY 436 (677)
T KOG0596|consen 357 KVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLY 436 (677)
T ss_pred EECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEE
Confidence 34456789999999999999999998888899998765432 34557799999999999 4999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||= ..+|..+|.+.....+...+..+..|+++|+.++ |+.||||.||||.|+++- .|.+||+|||+|..+..
T Consensus 437 mvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~I---H~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~ 511 (677)
T KOG0596|consen 437 MVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTI---HQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQP 511 (677)
T ss_pred EEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHH---HHhceeecCCCcccEEEE-eeeEEeeeechhcccCc
Confidence 999976 4599999997766565457888999999999999 557899999999999986 46899999999999887
Q ss_pred CCCcceeccccccccccCCcccCCC-----------CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEG-----------IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP 636 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 636 (704)
...+......+||+-||+||.+... +.+.++||||+||++|+|+.|+.||+.... .|.+
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~aK---- 581 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIAK---- 581 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHHH----
Confidence 7777777778999999999976432 266789999999999999999999987322 2222
Q ss_pred CCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 637 DGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+..+.++.-.-..+..+.. .+++++|..|++.||++||+..|+++
T Consensus 582 --l~aI~~P~~~Iefp~~~~~----~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 582 --LHAITDPNHEIEFPDIPEN----DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred --HHhhcCCCccccccCCCCc----hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 3344454332222222221 23889999999999999999999976
No 242
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=279.78 Aligned_cols=251 Identities=22% Similarity=0.260 Sum_probs=198.1
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+.+.+..||.|..|.||+++.. +|..+|||.+.... .++.+++...++++..- .+|.||+.+|+|.....+.+.||.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMel 172 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMEL 172 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHH
Confidence 3445667999999999999865 68999999997654 23445566667666655 499999999999998888999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
|.. .+...+.+-...+++.-.-++...+..||.||.+. .+|+|||+||+|||+|+.|++|+||||++-.+-+ +.
T Consensus 173 Ms~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd---Sk 246 (391)
T KOG0983|consen 173 MST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD---SK 246 (391)
T ss_pred HHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeec---cc
Confidence 843 66666766666788888888999999999999864 5799999999999999999999999999977643 34
Q ss_pred eeccccccccccCCcccCCC---CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 573 IQTMTIATIGYMAPEYGSEG---IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
..+..+|.+.|||||.+... .|+-++||||||++++|+.||+.||.+...+...+..... ..|
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~eP------------- 312 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEP------------- 312 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCC-------------
Confidence 45667899999999987644 6888999999999999999999999875443333333222 111
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+..+....++..+.+++..|++.|+.+||...++++.
T Consensus 313 --P~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 313 --PLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred --CCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 1122222367788999999999999999999998753
No 243
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.7e-35 Score=307.37 Aligned_cols=195 Identities=23% Similarity=0.279 Sum_probs=159.3
Q ss_pred cccccccCceEEEEEEEC---CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEEEEEeccC
Q 005278 420 CNLLGTGSFGSVYKGTLF---DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKALVLEFMP 494 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 494 (704)
..+||+|+||+||+|+.. +++.||+|.+... .....+.+|++++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 358999999999999854 4678999988643 223457789999999999999999998854 456789999986
Q ss_pred CCCHHHHHhhC--------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----CCCCcEEEeeeccc
Q 005278 495 NGSLEKWLYSH--------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL----DENMTAHVSDFGIS 562 (704)
Q Consensus 495 ~gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~----~~~~~~kl~Dfgla 562 (704)
++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~L---H~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 4888887632 23478889999999999999999 56789999999999999 46678999999999
Q ss_pred eecCCCCCc-ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCcc
Q 005278 563 KLLGEGDDS-VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEI 620 (704)
Q Consensus 563 ~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~ 620 (704)
+........ .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 876432211 12234568999999998876 45899999999999999999999999753
No 244
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.8e-35 Score=308.32 Aligned_cols=265 Identities=20% Similarity=0.254 Sum_probs=194.6
Q ss_pred cccccccc--CceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 419 ECNLLGTG--SFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 419 ~~~~ig~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
..++||+| +|++||+++. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++...+..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35689999 7889999985 478999999987543 233456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++|+|.+++..+ ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+..........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 999999999754 344899999999999999999994 5789999999999999999999999998754432211100
Q ss_pred -----eeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcc-----
Q 005278 573 -----IQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT----- 640 (704)
Q Consensus 573 -----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~----- 640 (704)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||.......... .......+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTTTIP 237 (327)
T ss_pred cccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHH-HHhcCCccccccccchh
Confidence 1112346778999999875 458899999999999999999999997633221111 111111100000
Q ss_pred --h--------hccccchh------------hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 --E--------VVDANLVR------------EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 --~--------~~~~~~~~------------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+ ..+..... .....+....+...+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 0 00000000 00001112234567889999999999999999999976
No 245
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.5e-35 Score=298.01 Aligned_cols=252 Identities=24% Similarity=0.284 Sum_probs=203.9
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||.||++... +++.+|+|.+.... ....+.+.+|++++++++||||+++++.+......++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36778889999999999999865 68999999987653 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCC-CCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS-TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~-~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++++|.+++......++......++.|++.|++|| |+ .+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYL---HEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHH---cCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 999999999987656689999999999999999999 56 8999999999999999999999999999876532211
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
....++..|+|||+..+..++.++||||||+++|++++|+.||.....................
T Consensus 157 ---~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 220 (265)
T cd06605 157 ---KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP------------- 220 (265)
T ss_pred ---hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-------------
Confidence 1156888999999999889999999999999999999999999764222122222211111000
Q ss_pred hhhhhhH-HHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 652 QAFSVKI-DCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 652 ~~~~~~~-~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+. .++..+.+++..||..+|++||++.|++.
T Consensus 221 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 221 -PPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred -CCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000111 14567889999999999999999999964
No 246
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.3e-35 Score=301.74 Aligned_cols=254 Identities=23% Similarity=0.402 Sum_probs=201.9
Q ss_pred CCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
++|+....||+|+||.||+|+.. +.+.||+|.+...... ....+.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888899999999999999854 3567999988654333 4567899999999999999999999999988999
Q ss_pred EEEeccCCCCHHHHHhhCC--------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 488 LVLEFMPNGSLEKWLYSHN--------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
+||||+++|+|.+++.... ..+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~L---H~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHL---SNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHh---hhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997543 1589999999999999999999 5678999999999999999999999999
Q ss_pred ccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCC
Q 005278 560 GISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 560 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
|++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||...... ........ ..
T Consensus 162 ~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~--~~~~~~~~---~~ 235 (275)
T cd05046 162 SLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE--EVLNRLQA---GK 235 (275)
T ss_pred ccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH--HHHHHHHc---CC
Confidence 9987543221 112233356788999999888888999999999999999999 78888653221 11111110 00
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. ......++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 236 ~~-------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 236 LE-------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred cC-------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 00 0011134567889999999999999999999999875
No 247
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-38 Score=291.30 Aligned_cols=249 Identities=24% Similarity=0.322 Sum_probs=209.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
-|.+++++|+|+||.||+|..+ +|+.+|+|.+.. ..+-.++..|+.+|++...|++|+++|.+......++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 3566789999999999999854 699999998754 4556788999999999999999999999998889999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
.|++.+.++.++..+.+..+..+++..+.||+|||. ..-+|||||+.|||++.+|.+|++|||.|-.+.+. -...
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MAKR 186 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MAKR 186 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhh--HHhh
Confidence 999999999888889999999999999999999964 56799999999999999999999999999766432 1223
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
..+.|||.|||||++..-.|..++||||+|++..||.-|++||.+..+.... + +.+. ...+.+
T Consensus 187 NTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI------------F---MIPT--~PPPTF 249 (502)
T KOG0574|consen 187 NTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI------------F---MIPT--KPPPTF 249 (502)
T ss_pred CccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee------------E---eccC--CCCCCC
Confidence 4568999999999999989999999999999999999999999875432110 0 0000 011233
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..++..+.++.+++++|+-+.|++|-|+-++++.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 4456778889999999999999999999888764
No 248
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=3.9e-35 Score=300.18 Aligned_cols=266 Identities=22% Similarity=0.247 Sum_probs=199.9
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|+....||+|+||.||+|+.. +++.||+|++..... ...+.+.+|+.++++++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999865 689999999864422 233567899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++++++..+.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07847 81 YCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD- 155 (286)
T ss_pred ccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-
Confidence 99998888776543 34899999999999999999994 57899999999999999999999999999987654322
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH---hhcCC--------Cc
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK---ESLPD--------GL 639 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~---~~~~~--------~~ 639 (704)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+. ...+.. ...+. ..
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhcccccc
Confidence 1223457889999998765 5578899999999999999999999976432211 111110 00000 00
Q ss_pred -chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 -TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 -~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+...............+..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000000000111233567889999999999999999999864
No 249
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=2.4e-35 Score=298.51 Aligned_cols=249 Identities=24% Similarity=0.342 Sum_probs=197.8
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---------hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---------RASRSFDSECEILRSIRHRNLIKIISNCCNIDF 485 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 485 (704)
+|.....||+|++|.||+|... +++.+|+|.+..... ...+.+.+|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999854 688999998864321 122568899999999999999999999999999
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.++|+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++..
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~ 156 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISKKL 156 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCccc
Confidence 999999999999999997653 4788899999999999999995 578999999999999999999999999999876
Q ss_pred CCCCCc----ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcch
Q 005278 566 GEGDDS----VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTE 641 (704)
Q Consensus 566 ~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (704)
...... .......|+..|+|||.+.+..++.++||||+||++|+|++|+.||...... ... ... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~----~~~-~~~-~~~--- 227 (267)
T cd06628 157 EANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL----QAI-FKI-GEN--- 227 (267)
T ss_pred ccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH----HHH-HHH-hcc---
Confidence 422111 1111235788999999998888999999999999999999999999763211 110 000 000
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 642 VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ...+...+..+.+++.+||+.+|.+||++.|+++
T Consensus 228 -~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 -AS---------PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -CC---------CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 00 0111234567888999999999999999999975
No 250
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=3.3e-35 Score=295.82 Aligned_cols=249 Identities=31% Similarity=0.515 Sum_probs=200.6
Q ss_pred CccccccccCceEEEEEEECC-----CCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 418 NECNLLGTGSFGSVYKGTLFD-----GTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++.+.||+|+||.||+++..+ +..||+|++...... ..+.+..|+++++.++|+||+++++++.+.+..+++||
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e 81 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME 81 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence 456789999999999998653 388999998755433 56789999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCc-cCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 492 FMPNGSLEKWLYSHNYF-LGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|+++++|.+++...... +++..++.++.|++.|++|| |+.+++||||+|+||+++.++.++++|||++........
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l---h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (258)
T smart00219 82 YMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL---ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDY 158 (258)
T ss_pred ccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH---hcCCeeecccccceEEEccCCeEEEcccCCceecccccc
Confidence 99999999999865444 89999999999999999999 567899999999999999999999999999987754422
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
... ....+++.|+|||...+..++.++||||+|+++|+|++ |..||..... ....+......
T Consensus 159 ~~~-~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~-------------- 221 (258)
T smart00219 159 YKK-KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSN--EEVLEYLKKGY-------------- 221 (258)
T ss_pred ccc-ccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCC--------------
Confidence 211 12337789999999988889999999999999999998 7888765211 11111111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
....+..++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 222 ---~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 ---RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0011112456788999999999999999999998764
No 251
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=9.8e-36 Score=302.99 Aligned_cols=246 Identities=23% Similarity=0.314 Sum_probs=199.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 4566778999999999999854 58899999987443 334567899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++... .+++..+..++.|++.|+.|| |+.+++|+||+|+||++++++.++++|||++..+..... .
T Consensus 85 ~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~l---H~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06642 85 GGGSALDLLKPG--PLEETYIATILREILKGLDYL---HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHH---hcCCeeccCCChheEEEeCCCCEEEccccccccccCcch--h
Confidence 999999988653 478899999999999999999 568899999999999999999999999999987643221 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
.....++..|+|||++.+..++.++|||||||++|||++|+.|+....... ...+.. ... .+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~----~~~----~~-------- 219 (277)
T cd06642 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIP----KNS----PP-------- 219 (277)
T ss_pred hhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhh----cCC----CC--------
Confidence 223457889999999998889999999999999999999999987532211 111110 000 00
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....++..+.+++.+||+.+|++||++.|+++
T Consensus 220 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 220 -TLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 011234566889999999999999999999987
No 252
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-35 Score=302.02 Aligned_cols=264 Identities=23% Similarity=0.296 Sum_probs=196.8
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4778899999999999999864 689999999865432 2345688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC--CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 493 MPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
++ ++|.+++... ...+++..+..++.|++.||+|| |+.+|+||||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFC---HSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 97 6898888743 25689999999999999999999 56789999999999999999999999999998654321
Q ss_pred cceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC--CC-c---chhc
Q 005278 571 SVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP--DG-L---TEVV 643 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~-~---~~~~ 643 (704)
.......+++.|+|||++.+ ..++.++|||||||++|||+||+.||.+...... .......... .. + ....
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 233 (285)
T cd07861 156 -RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ-LFRIFRILGTPTEDVWPGVTSLP 233 (285)
T ss_pred -ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHHHHhCCCChhhhhcchhhH
Confidence 11223457889999998765 4578899999999999999999999975321110 0000000000 00 0 0000
Q ss_pred c-----ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 D-----ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 ~-----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+ +..... ........++.++.+++.+|++.||++|||+.+|+.
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 234 DYKNTFPKWKKG-SLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHhhccccCcc-hhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 000000 000011124567789999999999999999999964
No 253
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=5.3e-35 Score=295.89 Aligned_cols=251 Identities=20% Similarity=0.338 Sum_probs=185.9
Q ss_pred cccccCceEEEEEEECCC---CEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCC
Q 005278 422 LLGTGSFGSVYKGTLFDG---TNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGS 497 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 497 (704)
.||+|+||.||+|+..++ ..+++|.+.... ....+.+.+|+..++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 699999999999975443 345667665432 2345678999999999999999999999999999999999999999
Q ss_pred HHHHHhhCC---CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 498 LEKWLYSHN---YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 498 L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
|.+++.+.. ...++.....++.|++.|++||| +.+++||||||+||+++.++.++|+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 999998542 33566778899999999999995 578999999999999999999999999998643221111122
Q ss_pred ccccccccccCCcccCC-------CCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 575 TMTIATIGYMAPEYGSE-------GIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
....++..|+|||+... ..++.++|||||||++|||++ |..||..... ................++.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 233 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVIKDQQVKLFKPQ 233 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhhcccccCCCc
Confidence 34467889999998743 345789999999999999997 5667754321 1111111111111111111
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
+. ......+.+++..|| .+|++||+++||++.|.
T Consensus 234 ~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 234 LE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11 123456778899999 67999999999988873
No 254
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.2e-35 Score=310.69 Aligned_cols=192 Identities=23% Similarity=0.297 Sum_probs=165.6
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
...+|.+.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++......++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4468999999999999999999865 5788999975322 23568999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+. |+|.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-- 211 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc--
Confidence 995 6999999877677999999999999999999995 5789999999999999999999999999997542211
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCC
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPT 617 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~ 617 (704)
......||+.|+|||++.+..++.++|||||||++|||+++..|+
T Consensus 212 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 -AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred -ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 122346899999999999999999999999999999999965554
No 255
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-37 Score=312.20 Aligned_cols=326 Identities=25% Similarity=0.282 Sum_probs=230.6
Q ss_pred CCCCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCC
Q 005278 3 YMLPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLT 82 (704)
Q Consensus 3 ~~l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~ 82 (704)
+.+++|++++|.+|.++ .+|.......+|+.|+|.+|.|+.+..+.++.++.|++||||.|.|+.++... |.
T Consensus 99 ~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~s-------fp 170 (873)
T KOG4194|consen 99 YNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPS-------FP 170 (873)
T ss_pred hcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCC-------CC
Confidence 56777777777777777 66776666666777777777777777777777777777777777777766544 55
Q ss_pred CCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCe
Q 005278 83 NCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQG 162 (704)
Q Consensus 83 ~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 162 (704)
.-.++++|+|++|.|+......|..+. +|.+|.|+.|+++...+..|.+|++|+.|+|..|+|.-.-.-.|.++++|+.
T Consensus 171 ~~~ni~~L~La~N~It~l~~~~F~~ln-sL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~n 249 (873)
T KOG4194|consen 171 AKVNIKKLNLASNRITTLETGHFDSLN-SLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQN 249 (873)
T ss_pred CCCCceEEeeccccccccccccccccc-hheeeecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhh
Confidence 666777777777777777777777775 6777777777777777777777777777777777777443556777777777
Q ss_pred eeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCccc
Q 005278 163 LYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSL 242 (704)
Q Consensus 163 L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 242 (704)
|.|..|.|...-...|..+.++++|+|+.|+++..-.+.+-+++.|+.|+|++|.|..+.++.++.+++|++|+|++|.|
T Consensus 250 lklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i 329 (873)
T KOG4194|consen 250 LKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRI 329 (873)
T ss_pred hhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEecccccc
Confidence 77777777765566677777777777777777755556677777777777777777777777777777777777777777
Q ss_pred CCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCC---cccccccccceEEecccCCCCCCC
Q 005278 243 NGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVP---KSFGSLISLESLDLSRNNLSGEIP 319 (704)
Q Consensus 243 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p---~~~~~l~~L~~L~l~~N~l~~~~p 319 (704)
+...+..|..+..|+.|+|++|.+...-..+|.++.+|+.|||++|.++..+. ..|..+++|+.|++.+|++....-
T Consensus 330 ~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~k 409 (873)
T KOG4194|consen 330 TRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPK 409 (873)
T ss_pred ccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecch
Confidence 76667777777777777777777765555566677777777777777665443 235567777777777777653333
Q ss_pred CCcccccccCcccccCCC
Q 005278 320 KNFSAQSFLSNYALCGPA 337 (704)
Q Consensus 320 ~~~~~~~~l~~~~l~g~~ 337 (704)
..|..+..+..+.+.+++
T Consensus 410 rAfsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 410 RAFSGLEALEHLDLGDNA 427 (873)
T ss_pred hhhccCcccceecCCCCc
Confidence 456666666666655554
No 256
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=4.1e-35 Score=295.00 Aligned_cols=248 Identities=26% Similarity=0.354 Sum_probs=198.7
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeee-CCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCN-IDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 491 (704)
+|+..+.||+|++|.||++... +++.||+|.+.... ....+.+.+|++++++++|+|++++.+.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999854 57899999986543 2344568899999999999999999998764 446789999
Q ss_pred ccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 492 FMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 492 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|+++++|.+++... ...+++..+..++.+++.|+++| |+.+++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~l---H~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYL---HEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 99999999999864 34589999999999999999999 567899999999999999999999999999987643221
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
......+++.|+|||+..+..++.++||||||+++||+++|+.||..... ..+.........
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~----------- 219 (257)
T cd08223 158 --MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKL----------- 219 (257)
T ss_pred --ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCC-----------
Confidence 12334688999999999999999999999999999999999999865221 111111100000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...+..+.+++.+|++.+|++||++.|+++
T Consensus 220 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 220 ---PPMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred ---CCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0111234567889999999999999999999975
No 257
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=305.74 Aligned_cols=245 Identities=28% Similarity=0.333 Sum_probs=199.1
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
-|..++-||.|+||.||-|+. .+.+.||||++.... .....++..|++++++++|||++.+-|+|......++|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 355567899999999999984 578899999987543 2334578899999999999999999999999989999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
||- |+-.+.+.-++.++.+..+..|+.+.+.||+|| |+.+.||||||+.|||+++.|.||++|||.|..+.+.
T Consensus 107 YCl-GSAsDlleVhkKplqEvEIAAi~~gaL~gLaYL---HS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA--- 179 (948)
T KOG0577|consen 107 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYL---HSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA--- 179 (948)
T ss_pred HHh-ccHHHHHHHHhccchHHHHHHHHHHHHHHHHHH---HHhhHHhhhccccceEecCCCeeeeccccchhhcCch---
Confidence 995 588999988888899999999999999999999 5677999999999999999999999999999887543
Q ss_pred ceeccccccccccCCccc---CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 572 VIQTMTIATIGYMAPEYG---SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
..++|||.|||||++ ..+.|+-|+||||+|++..|+.-+++|+-.+.. -..+-+.+.... |.+
T Consensus 180 ---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-MSALYHIAQNes---------PtL- 245 (948)
T KOG0577|consen 180 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNES---------PTL- 245 (948)
T ss_pred ---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-HHHHHHHHhcCC---------CCC-
Confidence 346899999999986 457899999999999999999999999643211 011111111110 001
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+.+..+..++..|+++-|.+|||..+++..
T Consensus 246 -------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 246 -------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred -------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 122456678899999999999999999888653
No 258
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.8e-35 Score=295.98 Aligned_cols=250 Identities=23% Similarity=0.294 Sum_probs=193.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCN--IDFK 486 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 486 (704)
.+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 47888999999999999999854 68999999886432 1234568899999999999999999998865 3567
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++++||+++++|.+++..... +++.....++.|++.|++|| |+.+|+||||+|+||+++.++.++|+|||++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~L---H~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~ 157 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYL---HSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 157 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCCCccccc
Confidence 899999999999999976543 78889999999999999999 46789999999999999999999999999997653
Q ss_pred CCCC-cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDD-SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.... ........++..|+|||++.+..++.++|||||||++||+++|+.||..... ... ......... .+
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~~~-~~~~~~~~~----~~ 228 (266)
T cd06651 158 TICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----MAA-IFKIATQPT----NP 228 (266)
T ss_pred cccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----HHH-HHHHhcCCC----CC
Confidence 2211 1111224588999999999988899999999999999999999999975321 111 111000000 01
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+......+.+++ .||..+|++||+++||++
T Consensus 229 ---------~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 229 ---------QLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ---------CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11122334456666 788899999999999964
No 259
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=327.51 Aligned_cols=258 Identities=26% Similarity=0.435 Sum_probs=212.8
Q ss_pred CCCCccccccccCceEEEEEEEC----C----CCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF----D----GTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNID 484 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 484 (704)
++....+.+|+|+||.||+|... . ...||||.++... ..+.+.+..|+++|+.+ +|+||+.++|+|...+
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 34445569999999999999743 1 4579999987654 34567899999999999 6999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCC---------------CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 005278 485 FKALVLEFMPNGSLEKWLYSHN---------------YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD 549 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~ 549 (704)
..++|+||+..|+|.++++..+ ..+...+.+.++.|||.|++|| .+.++||||+.++||++.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L---~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYL---ASVPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHH---hhCCccchhhhhhhEEec
Confidence 9999999999999999999766 3488999999999999999999 678899999999999999
Q ss_pred CCCcEEEeeeccceecCCCCCccee-ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccH
Q 005278 550 ENMTAHVSDFGISKLLGEGDDSVIQ-TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSL 627 (704)
Q Consensus 550 ~~~~~kl~Dfgla~~~~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~ 627 (704)
++..+||+|||+|+........... +...-+..|||||.+....++.|+|||||||++|||+| |..||.+.... ..+
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~l 531 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EEL 531 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HHH
Confidence 9999999999999976554443322 21114667999999999999999999999999999999 88999763211 111
Q ss_pred HHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 628 KHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
.++ .+.+.+...|..|+.+++++|..||+.+|++||++.|+++.++...
T Consensus 532 ~~~-----------------l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 532 LEF-----------------LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHH-----------------HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 112 2233445566788899999999999999999999999999999853
No 260
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.8e-35 Score=312.97 Aligned_cols=265 Identities=18% Similarity=0.195 Sum_probs=195.5
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC------
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI------ 483 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 483 (704)
..++|...+.||+|+||.||+|... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3578999999999999999999854 68899999986532 23345678899999999999999999987543
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
...++||||+++ ++.+++.. .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~L---H~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~ 174 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHH---hhCCeecCCCCHHHEEECCCCcEEEEeCCCcc
Confidence 357999999965 77777753 278888999999999999999 56799999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC--cch
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG--LTE 641 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~ 641 (704)
...... ......+|+.|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+........... ...
T Consensus 175 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (364)
T cd07875 175 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCPEFMK 250 (364)
T ss_pred ccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 653321 2233468999999999999999999999999999999999999997532111 1111111000000 000
Q ss_pred hcccc----------chh---h--------hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 642 VVDAN----------LVR---E--------EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 642 ~~~~~----------~~~---~--------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.+.+. ... . .............+.+++.+|++.||++|||+.|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred hhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000 000 0 00000011123567899999999999999999999763
No 261
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.3e-35 Score=299.76 Aligned_cols=254 Identities=27% Similarity=0.453 Sum_probs=198.0
Q ss_pred CCccccccccCceEEEEEEEC----CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC------
Q 005278 417 FNECNLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID------ 484 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 484 (704)
|...+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999753 36889999986543 234567889999999999999999999886532
Q ss_pred eEEEEEeccCCCCHHHHHhhC-----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 485 FKALVLEFMPNGSLEKWLYSH-----NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
..++++||+++|+|.+++... ...+++.....++.|++.|++||| +.+|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECcc
Confidence 347899999999999887532 234788899999999999999995 578999999999999999999999999
Q ss_pred ccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCC
Q 005278 560 GISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 560 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
|+++...............+++.|++||......++.++||||||+++|||++ |+.||..... .....+.....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~--- 232 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGN--- 232 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCC---
Confidence 99987643322222223345678999999988889999999999999999999 8888865322 11111111100
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHh
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKI 692 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~ 692 (704)
....+..++..+.+++.+|++.+|++||++.|+++.|+++
T Consensus 233 --------------~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 --------------RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred --------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0001113456788999999999999999999999999875
No 262
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.2e-35 Score=296.70 Aligned_cols=256 Identities=25% Similarity=0.338 Sum_probs=204.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|+||+||+|... ++..+|+|++.... ......+.+|+..++.++|+||+++++.+......++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999854 68899999986543 23456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC--CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 493 MPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
+++++|.+++... ...+++.....++.|++.|++|| |+.+++||||+|+||++++++.++|+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---h~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYL---HSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999999999754 24689999999999999999999 567899999999999999999999999999887654332
Q ss_pred cc--eeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 571 SV--IQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 571 ~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
.. ......|+..|+|||++... .++.++|+|||||++|||++|+.||....... .+..+.... +. .+
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~-~~--------~~ 227 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQND-PP--------SL 227 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCC-CC--------Cc
Confidence 21 12334688999999988776 78999999999999999999999997642211 111111110 00 00
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ......++..+.+++.+|++.||++||++.|+++
T Consensus 228 ~~----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 228 ET----GADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CC----ccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00 0001244567889999999999999999999975
No 263
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.6e-35 Score=295.69 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=197.4
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch----------hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE----------RASRSFDSECEILRSIRHRNLIKIISNCCNID 484 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~----------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 484 (704)
+|...+.||+|+||.||+|.. .+++.||+|.++.... ...+.+..|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 466778999999999999985 4689999998864211 11246788999999999999999999999999
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
..++||||+++|+|.+++.... .+++..+..++.|++.|+.|| |+.+++||||+|+||+++.++.++++|||++..
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYL---HSKGILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHH---hhCCeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 9999999999999999998764 478889999999999999999 557899999999999999999999999999986
Q ss_pred cCCCCCcceeccccccccccCCcccCCCC--CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYGSEGI--ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
..............++..|+|||+..... ++.++|+||||+++||+++|..||..... ...+.. .........
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~----~~~~~~-~~~~~~~~~ 232 (272)
T cd06629 158 SDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA----IAAMFK-LGNKRSAPP 232 (272)
T ss_pred ccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch----HHHHHH-hhccccCCc
Confidence 54322222223345889999999877654 78999999999999999999999864211 111111 000000000
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
... ....+++..+.+++.+||+.+|++||++.||++
T Consensus 233 ~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 233 IPP---------DVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCc---------cccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 000 011134567889999999999999999999975
No 264
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4.4e-35 Score=300.51 Aligned_cols=269 Identities=22% Similarity=0.305 Sum_probs=197.9
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++++|...+.||+|+||.||+|.. .+++.||+|.+..... .....+.+|+.+++.++|+||+++.+++...+..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 357899999999999999999985 4689999999865432 22346778999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+. +++.+++......+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||+++.......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 158 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ 158 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence 9995 6888887765555788888999999999999995 56899999999999999999999999999976433221
Q ss_pred cceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHH-HHHhhcCC-----------
Q 005278 571 SVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH-WVKESLPD----------- 637 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~----------- 637 (704)
......+++.|+|||++.+. .++.++|||||||++|||++|+.||+........+.+ |.....+.
T Consensus 159 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07870 159 --TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLP 236 (291)
T ss_pred --CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcc
Confidence 12234578999999988654 5788999999999999999999999764321111111 10000000
Q ss_pred -CcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 638 -GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 638 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..........................+.+++.+|++.||++|||+.|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 237 NYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 00000000000000000000112456788999999999999999999864
No 265
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-35 Score=301.66 Aligned_cols=251 Identities=23% Similarity=0.298 Sum_probs=202.6
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
.++|...+.||+|+||.||+|.. .++..||+|.+........+.+.+|+.++++++||||+++++++...+..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 36888899999999999999985 46889999998655444556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++.+.. +++..+..++.+++.|+.|| |+.+++||||+|+||+++.++.++|+|||++........
T Consensus 98 ~~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~L---H~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-- 170 (293)
T cd06647 98 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALEFL---HSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (293)
T ss_pred CCCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHH---HhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence 99999999987543 78889999999999999999 567899999999999999999999999999876543322
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......+++.|+|||......++.++||||||+++|++++|+.||......... ..+.. ....
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~~~----------------~~~~ 233 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLIAT----------------NGTP 233 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eehhc----------------CCCC
Confidence 122346888999999998888999999999999999999999999753221110 00000 0000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....+...+..+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111122334568889999999999999999999754
No 266
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=4.4e-35 Score=296.91 Aligned_cols=252 Identities=24% Similarity=0.356 Sum_probs=199.7
Q ss_pred CCCccccccccCceEEEEEEECC--CCEEEEEEeeccc----------hhhhHHHHHHHHHHHh-cCCCCCceEEeeeee
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL----------ERASRSFDSECEILRS-IRHRNLIKIISNCCN 482 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 482 (704)
+|+..+.||+|+||.||+|.... ++.+|+|.+.... ......+..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999654 7889999875321 1223456778888875 799999999999999
Q ss_pred CCeEEEEEeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 483 IDFKALVLEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 483 ~~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
.+..++||||+++++|.+++.. ....+++..++.++.|++.|+.|||+ ..+++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 9999999999999999998853 44568999999999999999999952 368999999999999999999999999
Q ss_pred ccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCc
Q 005278 560 GISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 560 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
|.+....... ......|+..|+|||...+..++.++||||||+++|||++|+.||.... .............
T Consensus 159 g~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~~~~~~~~~~~~ 230 (269)
T cd08528 159 GLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----MLSLATKIVEAVY 230 (269)
T ss_pred cceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HHHHHHHHhhccC
Confidence 9998764432 2334568899999999998889999999999999999999999986521 1111111110000
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
.. .....++..+.+++.+||+.||++||++.|+.++++
T Consensus 231 ~~-------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 EP-------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred Cc-------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 00 001123467889999999999999999999999875
No 267
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=2.6e-35 Score=310.85 Aligned_cols=265 Identities=20% Similarity=0.222 Sum_probs=195.6
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC------
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI------ 483 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 483 (704)
..++|...+.||+|+||.||++... .++.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999854 68999999986542 23345677899999999999999999988643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~L---H~~givHrDikp~Nill~~~~~~kl~Dfg~~~ 167 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCChHHEEECCCCCEEEeeCcccc
Confidence 356899999965 67776653 378888999999999999999 56789999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc--------
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-------- 635 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-------- 635 (704)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.+....+. +...+....
T Consensus 168 ~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 243 (355)
T cd07874 168 TAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-WNKVIEQLGTPCPEFMK 243 (355)
T ss_pred cCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCCHHHHH
Confidence 653321 22334689999999999988999999999999999999999999975321110 000000000
Q ss_pred --CCCcchhcc----------ccchhhh---hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 636 --PDGLTEVVD----------ANLVREE---QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 636 --~~~~~~~~~----------~~~~~~~---~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
......... +...... ............+.+++.+|++.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred hhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000000000 0000000 0000111224567899999999999999999999874
No 268
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-35 Score=304.56 Aligned_cols=248 Identities=22% Similarity=0.301 Sum_probs=197.1
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
|.....||+|+||.||++... ++..||||.+........+.+.+|+.+++.++|+||+++++.+...+..++||||+++
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~ 103 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEG 103 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCC
Confidence 334467999999999999854 6899999998765555566789999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++........ ...
T Consensus 104 ~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~ 176 (292)
T cd06658 104 GALTDIVTHT--RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--KRK 176 (292)
T ss_pred CcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--cCc
Confidence 9999988643 3788999999999999999995 56899999999999999999999999999876533221 122
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...|+..|+|||+..+..++.++||||||+++||+++|+.||....... .... +.... .+.. .
T Consensus 177 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~-~~~~~--------~~~~-------~ 239 (292)
T cd06658 177 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQ-AMRR-IRDNL--------PPRV-------K 239 (292)
T ss_pred eeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHhcC--------CCcc-------c
Confidence 3468899999999988889999999999999999999999986521100 0000 01000 0000 0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.....+..+.+++..|++.||++||++.|+++.
T Consensus 240 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 111234567789999999999999999999763
No 269
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.1e-35 Score=320.86 Aligned_cols=267 Identities=21% Similarity=0.259 Sum_probs=192.5
Q ss_pred HHHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCC------CCCceEEeeee
Q 005278 409 DIQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRH------RNLIKIISNCC 481 (704)
Q Consensus 409 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~ 481 (704)
++....++|.+.+.||+|+||+||+|... +++.||||+++.. ....+.+..|+++++.++| .+++++++++.
T Consensus 123 ~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 123 DIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred ccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 34445688999999999999999999854 6889999998643 2233456678888887755 45888989887
Q ss_pred eC-CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC--------
Q 005278 482 NI-DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-------- 552 (704)
Q Consensus 482 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-------- 552 (704)
.. ...++|||++ +++|.+++.+.+ .+++..+..++.|++.||+|||+ +.+||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccccccc
Confidence 64 5788999988 678999887653 48899999999999999999963 25899999999999998765
Q ss_pred --------cEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccc
Q 005278 553 --------TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGE 624 (704)
Q Consensus 553 --------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~ 624 (704)
.+||+|||.+..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||++....
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~- 351 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL- 351 (467)
T ss_pred cccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 499999998764321 123457999999999999999999999999999999999999999763221
Q ss_pred ccHHHHHHhh---cCCCcc---------hhcc------ccchhhh------hhhhhhHHHHHHHHHHHhhhcCCCCCCCC
Q 005278 625 MSLKHWVKES---LPDGLT---------EVVD------ANLVREE------QAFSVKIDCLLSIMHLALDCCMESPEQRV 680 (704)
Q Consensus 625 ~~~~~~~~~~---~~~~~~---------~~~~------~~~~~~~------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp 680 (704)
.....+... .+..+. ...+ +...... ............+.+++..||+.||++||
T Consensus 352 -~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 -EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred -HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 100101000 000000 0000 0000000 00000001134577999999999999999
Q ss_pred CHHHHHH
Q 005278 681 SMKDAAA 687 (704)
Q Consensus 681 t~~ev~~ 687 (704)
|++|+++
T Consensus 431 ta~e~L~ 437 (467)
T PTZ00284 431 NARQMTT 437 (467)
T ss_pred CHHHHhc
Confidence 9999975
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=3.6e-35 Score=303.01 Aligned_cols=256 Identities=21% Similarity=0.237 Sum_probs=199.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||++... +++.||+|.+.... ......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 46888899999999999999864 58899999987543 223456789999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++++|.+++...+ .+++.....++.+++.|++||| +.+++||||||+||+++.++.++++|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~ 156 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLT 156 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcc
Confidence 9999999999997654 4788899999999999999995 57899999999999999999999999999864211000
Q ss_pred -------------cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC
Q 005278 571 -------------SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD 637 (704)
Q Consensus 571 -------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 637 (704)
........++..|+|||++....++.++|+||||+++||+++|..||.+... ..+.......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~~~~ 231 (305)
T cd05609 157 TNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQVISD 231 (305)
T ss_pred ccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhc
Confidence 0011123578899999999888899999999999999999999999865221 1111111110
Q ss_pred CcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 638 GLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
... .+ .....++..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 232 ~~~---~~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 232 DIE---WP---------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred ccC---CC---------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 000 00 0001245667899999999999999997666665544
No 271
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.8e-35 Score=308.13 Aligned_cols=266 Identities=20% Similarity=0.241 Sum_probs=195.5
Q ss_pred HHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeC----
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNI---- 483 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 483 (704)
....++|...+.||+|+||.||+|.. .+++.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 34567899999999999999999985 4688999999865422 2345677899999999999999999987543
Q ss_pred --CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 484 --DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 484 --~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
...++++|++ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCCcc
Confidence 3468999988 77998887643 3889999999999999999995 57899999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC--
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG-- 638 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-- 638 (704)
++..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+........
T Consensus 165 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 238 (343)
T cd07878 165 ARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI-DQLKRIMEVVGTPSPE 238 (343)
T ss_pred ceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 9865432 223468999999998876 56889999999999999999999999652211 11111111100000
Q ss_pred cchhcccc--------chhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 639 LTEVVDAN--------LVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 639 ~~~~~~~~--------~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....+... +.... ..........+.+.+++.+|++.||++|||+.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 239 VLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000000 00000 0000001123457899999999999999999999753
No 272
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=9.9e-35 Score=292.03 Aligned_cols=248 Identities=22% Similarity=0.338 Sum_probs=201.2
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||+++. .+|+.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 478889999999999999985 468999999986432 23446789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++++|.+++... ...+++..+..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 9999999999754 345789999999999999999995 57899999999999999999999999999987643221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......|++.|+|||+..+..++.++|||||||+++++++|+.||.... .............
T Consensus 157 -~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~------------ 218 (256)
T cd08218 157 -LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIRGSY------------ 218 (256)
T ss_pred -hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhcCCC------------
Confidence 1123357889999999988889999999999999999999999986421 1111111111110
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..++.++.+++.+||+.+|++||++.||++
T Consensus 219 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 219 --PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred --CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0112234567889999999999999999999976
No 273
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.3e-35 Score=301.36 Aligned_cols=259 Identities=25% Similarity=0.310 Sum_probs=200.9
Q ss_pred chHHHHHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 406 SYLDIQRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
...++..+.++|...+.||+|+||.||++.. .+++.+|+|.+... ......+.+|+.+++++ +|||++++++++...
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-SDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-ccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 3345556788999999999999999999986 46889999998643 22345678899999999 899999999998654
Q ss_pred -----CeEEEEEeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEE
Q 005278 484 -----DFKALVLEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAH 555 (704)
Q Consensus 484 -----~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~k 555 (704)
+..++|+||+++|+|.++++. ....+++..++.++.|++.|++||| +.+++||||||+||+++.++.+|
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEE
Confidence 357999999999999998863 3456899999999999999999995 57899999999999999999999
Q ss_pred EeeeccceecCCCCCcceeccccccccccCCcccCCC-----CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHH
Q 005278 556 VSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG-----IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHW 630 (704)
Q Consensus 556 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~ 630 (704)
|+|||++........ ......|+..|+|||++... .++.++|||||||++|||++|+.||...... .....+
T Consensus 169 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~~ 245 (291)
T cd06639 169 LVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFKI 245 (291)
T ss_pred Eeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHHH
Confidence 999999886543221 12234688999999987543 3688999999999999999999998753211 111111
Q ss_pred HHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 631 VKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+. .+ ... ..+......+.+++.+||+.+|++||++.|+++
T Consensus 246 ~~~-~~---~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 246 PRN-PP---PTL------------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred hcC-CC---CCC------------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 110 00 000 011123456888999999999999999999975
No 274
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.8e-35 Score=302.28 Aligned_cols=266 Identities=21% Similarity=0.264 Sum_probs=197.0
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||+|+.. +|+.||+|.+..... .....+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778889999999999999864 689999999865422 2235678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
++ ++|.+++......+++..+..++.|+++|+.||| +.+|+||||||+||+++.++.++|+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 97 5898888766566899999999999999999995 57899999999999999999999999999986543221
Q ss_pred eeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC---c---chhcc-
Q 005278 573 IQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG---L---TEVVD- 644 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~- 644 (704)
......+++.|+|||++.+. .++.++|||||||++|||+||+.|+.........+....+...... + ....+
T Consensus 155 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07839 155 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234 (284)
T ss_pred CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccc
Confidence 12234578899999987664 4789999999999999999999986432211111111100000000 0 00000
Q ss_pred ---ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ---ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.......-.......+.++.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0000000000111234567889999999999999999999965
No 275
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5e-35 Score=294.59 Aligned_cols=247 Identities=26% Similarity=0.341 Sum_probs=198.8
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
+|...+.||+|++|.||+|... +++.|++|.+.... ....+.+.+|+++++.++|+||+++++++.+....+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4667789999999999999865 78999999986543 22446788999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~ 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS 156 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccccc
Confidence 99999999999997654 4788999999999999999995 5789999999999999999999999999988764332
Q ss_pred CcceeccccccccccCCcccCCCC-CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
......++..|+|||...... ++.++|+||||+++|++++|+.||....... ....+... ..
T Consensus 157 ---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~---~~---------- 219 (258)
T cd06632 157 ---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRS---KE---------- 219 (258)
T ss_pred ---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHHhc---cc----------
Confidence 123446889999999887766 8999999999999999999999997642110 00010000 00
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+..+...+.+++.+||+.+|++||++.|+++
T Consensus 220 ----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 220 ----LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ----CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 00111233466788999999999999999999975
No 276
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.3e-35 Score=296.19 Aligned_cols=246 Identities=28% Similarity=0.502 Sum_probs=197.4
Q ss_pred CCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
++|+..+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 4678889999999999999974 67889999986542 345788999999999999999999998664 4689999999
Q ss_pred CCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 495 NGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 495 ~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
+|+|.+++... ...+++..+..++.|++.|+.|| |+.+++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~---- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYL---ESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV---- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCeeccccCcceEEEcCCCcEEECCCccceeccccC----
Confidence 99999999854 34578999999999999999999 46789999999999999999999999999987643221
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....+..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+... ...+.
T Consensus 155 -~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~-~~~~~------------- 214 (254)
T cd05083 155 -DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKEC-VEKGY------------- 214 (254)
T ss_pred -CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHH-HhCCC-------------
Confidence 12234678999999988899999999999999999998 9999865321 111111 00100
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
....+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 001112345678899999999999999999999998764
No 277
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=8.1e-35 Score=294.25 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=201.9
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 490 (704)
+|+..+.||.|+||.||++.. .+++.+|+|.+.... ....+.+..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477889999999999999985 468899999986432 3345678899999999999999999998754 45678999
Q ss_pred eccCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 491 EFMPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGH--STPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 491 e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h--~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
||+++++|.+++... ...+++..++.++.+++.|++|||..+ +.+++|+||+|+||+++.++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999753 456899999999999999999996443 889999999999999999999999999999876
Q ss_pred CCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
..... ......+++.|+|||++.+..++.++||||||+++|+|++|+.||..... ....+.+....
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~---------- 226 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ--LQLASKIKEGK---------- 226 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH--HHHHHHHhcCC----------
Confidence 54321 12234689999999999988899999999999999999999999976321 11111111100
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....+...+..+.+++.+|++.+|++||++.||++.
T Consensus 227 -------~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 227 -------FRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 001122345678899999999999999999999763
No 278
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9.3e-35 Score=297.40 Aligned_cols=264 Identities=20% Similarity=0.238 Sum_probs=201.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++......++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4778899999999999999864 68999999987553 23346789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+ +++|.+++......+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.++++|||.+........ .
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-~ 155 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-R 155 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-C
Confidence 9 99999999866667899999999999999999995 57899999999999999999999999999987654321 1
Q ss_pred eeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC-------------C
Q 005278 573 IQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD-------------G 638 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------------~ 638 (704)
......++..|+|||.+.+. .++.++||||+|+++|||++|..||.+.... ....+....... .
T Consensus 156 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 156 LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI--EQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred ccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH--HHHHHHHHHcCCCChHHHhhccCcch
Confidence 12334689999999987654 4688999999999999999998887653211 111111111000 0
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.....+..... .......+....+.+++.+|++.+|++||+++++++
T Consensus 234 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 234 YNKITFPESKPI-PLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhcccCCCCCcc-hHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 000000000000 000111233577899999999999999999999975
No 279
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=4.4e-35 Score=299.04 Aligned_cols=258 Identities=23% Similarity=0.287 Sum_probs=200.5
Q ss_pred chHHHHHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeee-
Q 005278 406 SYLDIQRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCN- 482 (704)
Q Consensus 406 ~~~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 482 (704)
+..++....+.|+..+.||+|+||.||+|+. .+++.+|+|.+.... .....+..|+.+++++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 4445556678899999999999999999986 468999999986542 3345688899999999 69999999999853
Q ss_pred -----CCeEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEE
Q 005278 483 -----IDFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHV 556 (704)
Q Consensus 483 -----~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl 556 (704)
....+++|||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+|+||+|+||++++++.++|
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEE
Confidence 45789999999999999999753 345788888999999999999995 578999999999999999999999
Q ss_pred eeeccceecCCCCCcceeccccccccccCCcccC-----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHH
Q 005278 557 SDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGS-----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631 (704)
Q Consensus 557 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~ 631 (704)
+|||++........ ......|++.|+|||.+. ...++.++|||||||++|||++|+.||..........
T Consensus 163 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~---- 236 (282)
T cd06636 163 VDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF---- 236 (282)
T ss_pred eeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh----
Confidence 99999876532211 122346889999999875 3467889999999999999999999996532111000
Q ss_pred HhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. ......+ ......++..+.+++.+||+.||++||++.|+++
T Consensus 237 ~------~~~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 L------IPRNPPP--------KLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred h------HhhCCCC--------CCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 0 0000000 0111234567899999999999999999999964
No 280
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=4.3e-35 Score=304.13 Aligned_cols=194 Identities=29% Similarity=0.362 Sum_probs=168.3
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcC-C-----CCCceEEeeeeeCCeEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIR-H-----RNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 488 (704)
+|++.+.||+|.||.|-+|.. .+++.||||+++.. .....+...|+.+|..++ | -|+|+++++|....+.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 889999999999999999984 57999999999755 333456678999999996 3 489999999999999999
Q ss_pred EEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC--CCcEEEeeeccceec
Q 005278 489 VLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE--NMTAHVSDFGISKLL 565 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~--~~~~kl~Dfgla~~~ 565 (704)
|+|.+.. +|.++++.+ ...++...+..++.||+.||..| |+.+|||+||||+|||+.+ ...+||+|||.|+..
T Consensus 266 VfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L---~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~ 341 (586)
T KOG0667|consen 266 VFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFL---HELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFE 341 (586)
T ss_pred eehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeeccCChhheeeccCCcCceeEEeccccccc
Confidence 9999855 999999955 45589999999999999999999 5688999999999999974 347999999999986
Q ss_pred CCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
..... ....+..|+|||++.+.+|+.+.||||||||+.||++|.+-|.+
T Consensus 342 ~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 342 SQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred CCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 54433 23467789999999999999999999999999999999877765
No 281
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.2e-35 Score=302.07 Aligned_cols=263 Identities=24% Similarity=0.271 Sum_probs=199.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|+..+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888899999999999999975 589999998765432 234568899999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++++++.++..... .+++..+..++.|++.|++||| +.+++|||++|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE- 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc-
Confidence 999998888765443 3899999999999999999995 57899999999999999999999999999987643321
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh-----hcCCCcchh---
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-----SLPDGLTEV--- 642 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~~~--- 642 (704)
......++..|+|||+..+ ..++.++||||||+++|||++|+.||..... ...+.+. .........
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 230 (286)
T cd07846 156 -VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD----IDQLYHIIKCLGNLIPRHQEIFQK 230 (286)
T ss_pred -ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch----HHHHHHHHHHhCCCchhhHHHhcc
Confidence 1223457889999998765 4578899999999999999999999864221 1111110 000000000
Q ss_pred -------ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 643 -------VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 643 -------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+..............++..+.+++..||+.+|++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 231 NPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred chHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000011112244677899999999999999999999975
No 282
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.5e-35 Score=306.47 Aligned_cols=236 Identities=22% Similarity=0.211 Sum_probs=181.7
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhc---CCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSI---RHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
||+|+||+||+|+.. +++.||||++..... ........|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999854 689999999865321 1223445566666665 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... ....
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN--KTTN 154 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--CCcc
Confidence 99999987653 4889999999999999999995 5789999999999999999999999999987543221 1123
Q ss_pred cccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
...||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ............ . +
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~-~-----~------- 216 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGKV-R-----F------- 216 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCCC-C-----C-------
Confidence 45689999999988654 478999999999999999999999965211 111111100000 0 0
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
.....+..+.+++.+|++.||++||++.
T Consensus 217 -~~~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 217 -PKNVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred -CCccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 0012345677899999999999999543
No 283
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.7e-35 Score=302.44 Aligned_cols=247 Identities=21% Similarity=0.290 Sum_probs=197.0
Q ss_pred CccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 418 NECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||++++
T Consensus 24 ~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~ 103 (297)
T cd06659 24 ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGG 103 (297)
T ss_pred HhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCC
Confidence 33457999999999999854 68999999987654445567889999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecc
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTM 576 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 576 (704)
+|.+++... .+++..+..++.|++.|++|| |+.+++||||+|+||+++.++.++|+|||++........ ....
T Consensus 104 ~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~L---H~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~~~ 176 (297)
T cd06659 104 ALTDIVSQT--RLNEEQIATVCESVLQALCYL---HSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KRKS 176 (297)
T ss_pred CHHHHHhhc--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cccc
Confidence 999987653 378999999999999999999 567899999999999999999999999999876543221 1223
Q ss_pred ccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhh
Q 005278 577 TIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSV 656 (704)
Q Consensus 577 ~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (704)
..|+..|+|||++.+..++.++|||||||++|||++|+.||..... .............. ...
T Consensus 177 ~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~---------------~~~ 239 (297)
T cd06659 177 LVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPK---------------LKN 239 (297)
T ss_pred eecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhccCCCC---------------ccc
Confidence 4688999999999888899999999999999999999999864211 11111111100000 000
Q ss_pred hHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 657 KIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 657 ~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....+..+.+++.+|++.+|++||++.|+++.
T Consensus 240 ~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 240 AHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 11224567889999999999999999999873
No 284
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.4e-35 Score=298.47 Aligned_cols=267 Identities=22% Similarity=0.295 Sum_probs=197.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|++|.||+|... +++.||+|.+..... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 57888999999999999999865 689999999865432 2234567899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++ +|.+++......+++.....++.|+++|++||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~-- 158 (291)
T cd07844 85 LDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK-- 158 (291)
T ss_pred CCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc--
Confidence 974 999999876667899999999999999999994 57899999999999999999999999999875432111
Q ss_pred eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-C-CC-cchhcc----
Q 005278 573 IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-P-DG-LTEVVD---- 644 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~---- 644 (704)
......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.........+....+... + .. +.....
T Consensus 159 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (291)
T cd07844 159 TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEF 238 (291)
T ss_pred cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccc
Confidence 1122346889999998765 45788999999999999999999999653311111111110000 0 00 000000
Q ss_pred -----ccchhhhh-hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 -----ANLVREEQ-AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 -----~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
........ ...........+.+++.+|++.+|++||++.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 239 KPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 00000000 00000011256788999999999999999999864
No 285
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-34 Score=295.37 Aligned_cols=255 Identities=25% Similarity=0.271 Sum_probs=200.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 490 (704)
++|+..+.||.|++|.||++... +++.+|+|.+..... .....+.+|++++++++||||+++++++.+ .+..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46788899999999999999964 689999999875432 345678999999999999999999998865 34689999
Q ss_pred eccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
||+++++|.+++.. ....++......++.|++.|++|| |+.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL---HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 99999999988763 344578899999999999999999 567899999999999999999999999999876532
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccc---ccccHHHHHHhhcCCCcchhcc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFI---GEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
.. .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||..... .......|............
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 231 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE-- 231 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccC--
Confidence 21 1234578899999999988999999999999999999999999976422 11122222221111000000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.......+..+.+++.+||+.+|++|||+.|+++
T Consensus 232 ---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 232 ---------PGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred ---------CCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 0000123567889999999999999999999977
No 286
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.1e-34 Score=290.92 Aligned_cols=249 Identities=28% Similarity=0.365 Sum_probs=204.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
+|+..+.||+|++|.||++... +++.+++|++..........+.+|++.+++++|++++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4777889999999999999965 689999999976655456789999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+++|.+++......+++..+..++.+++.|++|| |+.+++||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l---h~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---~ 154 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYL---HSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA---R 154 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHh---hcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---c
Confidence 9999999987656689999999999999999999 558899999999999999999999999999987654321 2
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
....++..|+|||++.+..++.++||||||+++|+|++|+.||...... ..............
T Consensus 155 ~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~------------ 217 (253)
T cd05122 155 NTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIATNGPPGL------------ 217 (253)
T ss_pred cceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhcCCCCc------------
Confidence 3446889999999998888999999999999999999999998753211 11100000000000
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....++..+.+++..|++.||++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 011112456889999999999999999999975
No 287
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.1e-34 Score=296.72 Aligned_cols=253 Identities=25% Similarity=0.328 Sum_probs=205.5
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
..++.|+..+.||+|++|.||+|... ++..+|+|++..... ..+.+..|++.++.++|+|++++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 45677888899999999999999976 689999999876543 4567889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++++|.+++......+++..+..++.+++.|++|| |+.+++|+||+|+||+++.++.++|+|||++........
T Consensus 95 e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~l---H~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 95 EYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYL---HSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred eccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 99999999999987655689999999999999999999 568999999999999999999999999999876543221
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
......++..|+|||++.+..++.++|||||||++|+|++|+.||...... .....+.. ....
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-~~~~~~~~----~~~~---------- 234 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-RALFLITT----KGIP---------- 234 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh----cCCC----------
Confidence 112335788999999998888999999999999999999999998653211 11111110 0000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.......++..+.+++.+|++.+|.+||++.++++
T Consensus 235 --~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 235 --PLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred --CCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 01111224567889999999999999999999965
No 288
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.4e-34 Score=300.64 Aligned_cols=193 Identities=23% Similarity=0.296 Sum_probs=158.0
Q ss_pred ccccccCceEEEEEEEC---CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeee--CCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF---DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN--IDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~~ 495 (704)
.+||+|+||.||+|+.. ++..||+|.+... .....+.+|++++++++||||+++++++.. ....++|+||+++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~ 84 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGT--GISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH 84 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCC--CCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC
Confidence 57999999999999864 4578999988643 223467889999999999999999998854 5577899999865
Q ss_pred CCHHHHHhhC--------CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee----CCCCcEEEeeeccce
Q 005278 496 GSLEKWLYSH--------NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL----DENMTAHVSDFGISK 563 (704)
Q Consensus 496 gsL~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~----~~~~~~kl~Dfgla~ 563 (704)
++.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||++ +.++.+||+|||+++
T Consensus 85 -~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l---H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07867 85 -DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL---HANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred -cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH---HhCCEEcCCCCHHHEEEccCCCCCCcEEEeecccee
Confidence 787777521 23478889999999999999999 56789999999999999 566799999999998
Q ss_pred ecCCCCCc-ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 564 LLGEGDDS-VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 564 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
........ .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred ccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 76443221 12233468999999998876 4588999999999999999999999975
No 289
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.8e-35 Score=297.06 Aligned_cols=253 Identities=25% Similarity=0.320 Sum_probs=199.6
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCC-----
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNID----- 484 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~----- 484 (704)
..+++|+..+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35689999999999999999999964 678999999875433 346789999999999 6999999999996644
Q ss_pred -eEEEEEeccCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeec
Q 005278 485 -FKALVLEFMPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560 (704)
Q Consensus 485 -~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 560 (704)
..++||||+++++|.+++... ...+++..+..++.|++.|++|| |+.+++|+||+|+||++++++.++++|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~l---H~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYL---HENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH---hcCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 489999999999999998742 35689999999999999999999 56889999999999999999999999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
++....... .......|+..|+|||++.. ..++.++|||||||++|++++|+.||...... ....+...
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~--- 232 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPR--- 232 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhc---
Confidence 998654322 12233468899999998653 34778999999999999999999999653211 11111100
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. .+ ....+..++..+.+++.+|++.||++|||+.|+++
T Consensus 233 -~~-----~~-------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 -NP-----PP-------TLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -cC-----CC-------CCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 00 00 01111234567889999999999999999999975
No 290
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.8e-34 Score=290.14 Aligned_cols=247 Identities=25% Similarity=0.402 Sum_probs=199.5
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||++.. .+++.+|+|.+.... ......+.+|++++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999985 468999999986542 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeeccceecCCCCC
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla~~~~~~~~ 570 (704)
+++++|.+++... ...+++..+..++.+++.|++|| |+.+++|+||+|+||+++.+ +.+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~l---h~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHV---HTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 9999999999864 34589999999999999999999 55789999999999999855 4689999999987644321
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....++..|+|||...+..++.++||||||+++|+|++|+.||..... .............
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~---------- 219 (256)
T cd08220 158 ---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMSGTFA---------- 219 (256)
T ss_pred ---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHhcCCC----------
Confidence 2234588899999999988899999999999999999999999865321 1111111100000
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+..++..+.+++..||+.+|++||++.|+++
T Consensus 220 ----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 ----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 011124566889999999999999999999975
No 291
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1.3e-34 Score=295.72 Aligned_cols=249 Identities=25% Similarity=0.310 Sum_probs=192.2
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHH-HHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEI-LRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|+..+.||+|+||.||+|+.. +|+.||+|++..... .....+..|+.. ++..+||||+++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47888999999999999999865 699999999875432 223445555554 666789999999999999999999999
Q ss_pred ccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCC-CcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 492 FMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHST-PMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 492 ~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~-~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
|++ |+|.+++.. ....+++..++.++.|++.|++||| +. +++||||||+||+++.++.+||+|||++..+..
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 688888763 3346899999999999999999995 44 899999999999999999999999999986533
Q ss_pred CCCcceeccccccccccCCcccCC----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSE----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
.. ......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||.........+...... ..
T Consensus 157 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~----~~---- 225 (283)
T cd06617 157 SV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE----PS---- 225 (283)
T ss_pred cc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc----CC----
Confidence 21 1223468889999998764 456889999999999999999999986532211111111100 00
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.. ....++.++.+++..||+.+|++||++.|+++
T Consensus 226 -~~~--------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 -PQL--------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred -CCC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 01124567889999999999999999999976
No 292
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=1.3e-34 Score=292.64 Aligned_cols=252 Identities=24% Similarity=0.354 Sum_probs=200.8
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|...+.||+|+||.||+|... +++.||+|.+..... ...+.+..|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999854 789999999876543 3567899999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++.... .+++..+..++.+++.|++||| +.+|+|+||+|+||++++++.+||+|||++..........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 99999999998653 3788899999999999999995 5789999999999999999999999999998775433221
Q ss_pred e--eccccccccccCCcccCCCC---CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 573 I--QTMTIATIGYMAPEYGSEGI---ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 573 ~--~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
. .....+++.|+|||++.+.. .+.++||||||+++||+++|+.||...... ........... .
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~--------~--- 224 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGAGH--------K--- 224 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhcCC--------C---
Confidence 1 11245788999999987766 889999999999999999999999753211 11111111000 0
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+....++..+.+++..||+.+|++||++.|+++
T Consensus 225 ----~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 225 ----PPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ----CCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001111123556788999999999999999999864
No 293
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.1e-34 Score=298.73 Aligned_cols=265 Identities=23% Similarity=0.271 Sum_probs=198.7
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh-----hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER-----ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
+|+..+.||+|+||.||+|... +++.||+|.+...... ....+..|++++++++|+||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4777889999999999999864 6899999998754322 234567899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+ +|+|.+++......+++..+..++.|+++||.|| |+.+|+|+||+|+||+++.++.++|+|||+++......
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 156 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYL---HSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN 156 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH---HhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC
Confidence 9999 8999999986655689999999999999999999 56789999999999999999999999999998765432
Q ss_pred CcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC---Ccc-----
Q 005278 570 DSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD---GLT----- 640 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~----- 640 (704)
. ......+++.|+|||.+.+ ..++.++|||||||++|||++|..||...... ..+.......... .+.
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (298)
T cd07841 157 R--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTSL 233 (298)
T ss_pred c--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhcccc
Confidence 2 1223356788999998754 46788999999999999999998777642211 1111111100000 000
Q ss_pred -hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 -EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....................+..+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 234 PDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred cccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 00000000000001111233567889999999999999999999976
No 294
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1e-34 Score=296.51 Aligned_cols=247 Identities=22% Similarity=0.272 Sum_probs=197.7
Q ss_pred CCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 417 FNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
|...+.||+|++|.||+|.. .+++.+|+|.+........+.+.+|+.+++.++||||+++++++...+..++++||+++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44457999999999999985 47899999998755444556788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
++|.+++.. ..+++..+..++.|++.|++|| |+.+++||||+|+||+++.++.++++|||.+........ ...
T Consensus 101 ~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~~~ 173 (285)
T cd06648 101 GALTDIVTH--TRMNEEQIATVCLAVLKALSFL---HAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--RRK 173 (285)
T ss_pred CCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--ccc
Confidence 999999876 3478899999999999999999 557899999999999999999999999998875533211 122
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...|++.|+|||...+..++.++|||||||++|||++|+.||..... ........... .+.. .
T Consensus 174 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~~-----~~~~-------~ 236 (285)
T cd06648 174 SLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDNL-----PPKL-------K 236 (285)
T ss_pred cccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhcC-----CCCC-------c
Confidence 34689999999999888899999999999999999999999864211 11111110000 0000 0
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....++..+.+++.+||+.+|++||++.|+++
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 237 NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 11123457889999999999999999999974
No 295
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.9e-34 Score=297.97 Aligned_cols=247 Identities=28% Similarity=0.300 Sum_probs=197.0
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
...|...+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+++++.++||||+++.+++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 356888899999999999999864 68999999886432 22335688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+||++ |++.+++......+++..+..++.|++.|+.|| |+.+|+||||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~L---H~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~- 168 (307)
T cd06607 94 MEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYL---HSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA- 168 (307)
T ss_pred HHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHH---HHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence 99996 688888776555689999999999999999999 4578999999999999999999999999998765332
Q ss_pred CcceeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 570 DSVIQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
....+++.|+|||++. ...++.++||||||+++|||+||+.||...... ........... +
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~-----~- 232 (307)
T cd06607 169 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNDS-----P- 232 (307)
T ss_pred -----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHHHhcCCC-----C-
Confidence 2245788999999874 456888999999999999999999998653211 00000000000 0
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
......++..+.+++.+||+.+|++||++.++++.
T Consensus 233 -------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 233 -------TLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred -------CCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00112345678899999999999999999999873
No 296
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.4e-34 Score=292.44 Aligned_cols=250 Identities=23% Similarity=0.247 Sum_probs=194.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFK 486 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 486 (704)
++|.+.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47888999999999999999864 58999999875322 12345788899999999999999999998764 467
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
+++|||+++|+|.+++.... .+++.....++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~ 157 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQ 157 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccccc
Confidence 89999999999999997654 3788888999999999999994 5789999999999999999999999999998653
Q ss_pred CCCCc-ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDDS-VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
..... .......++..|+|||...+..++.++|||||||++|||++|+.||...... ..... .....
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~-~~~~~------- 225 (265)
T cd06652 158 TICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFK-IATQP------- 225 (265)
T ss_pred cccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHH-HhcCC-------
Confidence 22111 1122345889999999998888999999999999999999999998653111 11110 00000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+......+.+++.+|+. +|++||+++|+++
T Consensus 226 ------~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 226 ------TNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred ------CCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0011122344567788899985 9999999999975
No 297
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.8e-34 Score=292.24 Aligned_cols=253 Identities=24% Similarity=0.335 Sum_probs=199.7
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
+|+..+.||+|++|.||+|.. .+++.||+|.+.... ....+.+..|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999985 578999999986433 1234678899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeeccceecCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFGISKLLGE 567 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfgla~~~~~ 567 (704)
|+||+++++|.+++...+ .+++..+..++.|++.|++|| |+.+++|+||+|+||+++.++ .++|+|||.+..+..
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~L---H~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~ 156 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYL---HENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAA 156 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEEccccccccccc
Confidence 999999999999997654 478899999999999999999 457899999999999998776 599999999987644
Q ss_pred CCC--cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 568 GDD--SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 568 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
... ........++..|+|||+..+..++.++||||+|+++|++++|..||...... .............
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~------- 227 (268)
T cd06630 157 KGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASAT------- 227 (268)
T ss_pred ccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccC-------
Confidence 311 11122345789999999998888999999999999999999999998642211 1111111100000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+...+..+.+++.+|++.+|++||++.|+++
T Consensus 228 ------~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 228 ------TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ------CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 001122234567889999999999999999999964
No 298
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-37 Score=309.80 Aligned_cols=330 Identities=23% Similarity=0.255 Sum_probs=300.5
Q ss_pred CCCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCC
Q 005278 4 MLPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTN 83 (704)
Q Consensus 4 ~l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~ 83 (704)
..++.++|++++|++..+-+..|.++++|+++++.+|.++ .+|...+...+|+.|+|.+|.|+++.... +..
T Consensus 76 lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~-------L~~ 147 (873)
T KOG4194|consen 76 LPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEE-------LSA 147 (873)
T ss_pred CccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHH-------HHh
Confidence 3456678999999999888889999999999999999999 66776677777999999999999988776 899
Q ss_pred CCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCee
Q 005278 84 CRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGL 163 (704)
Q Consensus 84 l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (704)
++.|+.||||.|.|+...-..|..- .++++|+|++|.|+..-...|.++.+|.+|.|++|+++...+..|.++++|+.|
T Consensus 148 l~alrslDLSrN~is~i~~~sfp~~-~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~L 226 (873)
T KOG4194|consen 148 LPALRSLDLSRNLISEIPKPSFPAK-VNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESL 226 (873)
T ss_pred HhhhhhhhhhhchhhcccCCCCCCC-CCceEEeeccccccccccccccccchheeeecccCcccccCHHHhhhcchhhhh
Confidence 9999999999999997666666654 379999999999999999999999999999999999998888899999999999
Q ss_pred eccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccC
Q 005278 164 YLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLN 243 (704)
Q Consensus 164 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 243 (704)
+|..|+|.-.-.-+|.++++|+.|.|.+|.+.......|-.+.+++.|+|..|+++.+-..++.++++|+.|+||+|.|.
T Consensus 227 dLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~ 306 (873)
T KOG4194|consen 227 DLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQ 306 (873)
T ss_pred hccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhh
Confidence 99999998444668999999999999999999877889999999999999999999888889999999999999999999
Q ss_pred CCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCCCCCCC---
Q 005278 244 GSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPK--- 320 (704)
Q Consensus 244 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--- 320 (704)
.+.++.+.-.++|+.|+|++|+|+...+..|..+..|+.|+|++|++...--..|..+.+|+.|||++|.++..+.+
T Consensus 307 rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~ 386 (873)
T KOG4194|consen 307 RIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAV 386 (873)
T ss_pred eeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchh
Confidence 99999999999999999999999988889999999999999999999987778899999999999999999987765
Q ss_pred CcccccccCcccccCCCccCCC
Q 005278 321 NFSAQSFLSNYALCGPARLQVP 342 (704)
Q Consensus 321 ~~~~~~~l~~~~l~g~~~~~~~ 342 (704)
.|..+.+++.+.+.|+...+++
T Consensus 387 ~f~gl~~LrkL~l~gNqlk~I~ 408 (873)
T KOG4194|consen 387 AFNGLPSLRKLRLTGNQLKSIP 408 (873)
T ss_pred hhccchhhhheeecCceeeecc
Confidence 5778889999999999765543
No 299
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.2e-34 Score=297.07 Aligned_cols=243 Identities=27% Similarity=0.308 Sum_probs=197.6
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|+||.||++... +++.+|+|++.... ....+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888899999999999999865 68999999986532 223466889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++++|.+++.... .++...+..++.|++.|++||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC--
Confidence 9999999999997663 4889999999999999999995 578999999999999999999999999999876433
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||..... ...+ .... ..
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~-~~~~-~~------------ 213 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP----IQIY-EKIL-EG------------ 213 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH----HHHH-HHHh-cC------------
Confidence 2234688999999999888889999999999999999999999865321 0000 0000 00
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAA 686 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~ 686 (704)
....+...+..+.+++.+||+.+|++|| +++|++
T Consensus 214 --~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 214 --KVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred --CccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 0011112345678899999999999999 666664
No 300
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=4.9e-34 Score=288.38 Aligned_cols=251 Identities=25% Similarity=0.304 Sum_probs=205.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++|+..+.||+|++|.||+|+.. +++.||+|++..... .....+..|++.+++++|+|++++++++......++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888899999999999999866 599999999876543 3457799999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCC-CCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHS-TPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~-~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+++++|.+++... ..+++..+..++.|++.|++|| |+ .+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~l---h~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~ 156 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYL---HTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ 156 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHH---hccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc
Confidence 9999999999865 4589999999999999999999 66 89999999999999999999999999999876433221
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccc-ccccHHHHHHhhcCCCcchhccccchhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFI-GEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
.....++..|+|||...+..++.++|+||||+++|+|+||+.||..... .......+.. ....
T Consensus 157 --~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~----------- 220 (264)
T cd06623 157 --CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---DGPP----------- 220 (264)
T ss_pred --ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---cCCC-----------
Confidence 1234578899999999998999999999999999999999999976432 1111111111 0000
Q ss_pred hhhhhhhHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 651 EQAFSVKID-CLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 651 ~~~~~~~~~-~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
...+.. ++..+.+++..|++.+|++||++.|+++.
T Consensus 221 ---~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 ---PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred ---CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 001112 45678899999999999999999999763
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.9e-34 Score=293.39 Aligned_cols=247 Identities=23% Similarity=0.325 Sum_probs=199.7
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
-|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+..+++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 3667789999999999999854 68899999876443 233457889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++++|.+++... .+++.....++.+++.|+.|| |+.+++|+||+|+||+++.++.++++|||++........ .
T Consensus 85 ~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~l---h~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~--~ 157 (277)
T cd06641 85 GGGSALDLLEPG--PLDETQIATILREILKGLDYL---HSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI--K 157 (277)
T ss_pred CCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---ccCCeecCCCCHHhEEECCCCCEEEeecccceecccchh--h
Confidence 999999998754 478999999999999999999 668999999999999999999999999999876643221 1
Q ss_pred eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 574 QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
.....++..|+|||+..+..++.++|+|||||++|+|++|..||...... .+... ......
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~-~~~~~~------------- 218 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFL-IPKNNP------------- 218 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHH-HhcCCC-------------
Confidence 22345788999999998888999999999999999999999998653211 11111 000000
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
......++..+.+++..|++.+|++||++.|+++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 00112345667889999999999999999999884
No 302
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=2e-34 Score=293.50 Aligned_cols=247 Identities=23% Similarity=0.363 Sum_probs=197.8
Q ss_pred CCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC---CCCCceEEeeeeeCCeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIR---HRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 490 (704)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999995 478999999986543 234467889999999996 999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++++|.+++... .+++.....++.+++.|+.|| |+.+|+|+||+|+||+++.++.++++|||++........
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~l---h~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYI---HKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 999999999998754 588999999999999999999 567899999999999999999999999999987754331
Q ss_pred cceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 571 SVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
......|+..|+|||...+ ..++.++|||||||++|+|++|..||..... ..+....... ..+.+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~~~~~-----~~~~~~- 223 (277)
T cd06917 157 --KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMMLIPKS-----KPPRLE- 223 (277)
T ss_pred --ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhccccC-----CCCCCC-
Confidence 1233468899999998765 4468899999999999999999999975321 1111100000 001110
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+.++.+++..||+.||++||++.|+++
T Consensus 224 -------~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 -------DNGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred -------cccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0113567889999999999999999999965
No 303
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-34 Score=295.85 Aligned_cols=264 Identities=24% Similarity=0.301 Sum_probs=196.3
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|++|.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999864 689999998865432 2335788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+. ++|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||+++.++.+|++|||++........
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 96 6899988743 456899999999999999999995 57899999999999999999999999999876543221
Q ss_pred ceeccccccccccCCcccCCCC-CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-CCC-cchhcc----
Q 005278 572 VIQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-PDG-LTEVVD---- 644 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~---- 644 (704)
......+++.|+|||+..+.. ++.++||||||+++|||+||+.||....... ...+...... +.. ......
T Consensus 156 -~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 156 -TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred -ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHHHH
Confidence 122335688999999876544 6889999999999999999999986532111 1111111100 000 000000
Q ss_pred -----ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 -----ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 -----~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+..... ............+.+++.+|++.||++||+++|+++
T Consensus 234 ~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 234 YKPSFPKWARQ-DFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHhhccccccc-CHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000 000011123456788999999999999999999974
No 304
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=304.20 Aligned_cols=274 Identities=27% Similarity=0.349 Sum_probs=207.0
Q ss_pred CCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC------CeEE
Q 005278 416 GFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNI------DFKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 487 (704)
.|...+.||+|+||.||+|+ ..+|+.||||.++... ....+..-+|++++++++|+|||++++.-.+. +...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 34556789999999999999 4579999999997644 23456778999999999999999999986553 3567
Q ss_pred EEEeccCCCCHHHHHhh--CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC--CCC--cEEEeeecc
Q 005278 488 LVLEFMPNGSLEKWLYS--HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD--ENM--TAHVSDFGI 561 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~--~~~--~~kl~Dfgl 561 (704)
+|||||.+|||...+.+ +...+++...+.++.+++.||.||| +.+||||||||.||++- ++| -.||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999984 4567999999999999999999994 67899999999999983 434 479999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccH-HHHH-HhhcCCC
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSL-KHWV-KESLPDG 638 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~-~~~~-~~~~~~~ 638 (704)
|+.+.++. .....+||..|++||+.. .+.|+..+|.|||||++||++||..||.......... ..|. ....+.+
T Consensus 171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 99886543 456678999999999988 5889999999999999999999999998754432211 1221 1222333
Q ss_pred cchhccccchhh----h---hhhhhhHHHHHHHHHHHhhhcCCCCCCCC--CHHHHHHHHHHhHHH
Q 005278 639 LTEVVDANLVRE----E---QAFSVKIDCLLSIMHLALDCCMESPEQRV--SMKDAAAKLKKIKEK 695 (704)
Q Consensus 639 ~~~~~~~~~~~~----~---~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp--t~~ev~~~L~~~~~~ 695 (704)
......+...+. . ............+.+.+..++..+|.+|- ...+....+..+...
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 222222221111 0 01111223334566777788888999999 777777777776544
No 305
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.5e-35 Score=321.80 Aligned_cols=256 Identities=27% Similarity=0.367 Sum_probs=192.0
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC-----
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNI----- 483 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 483 (704)
.+...+|++.+.||+||||.||+++.+ ||+.+|||++.... ......+.+|+..+++++|||||+++..|.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 356678999999999999999999955 89999999997664 33456788999999999999999997333100
Q ss_pred --------------------------------------------------------------------------------
Q 005278 484 -------------------------------------------------------------------------------- 483 (704)
Q Consensus 484 -------------------------------------------------------------------------------- 483 (704)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHH
Q 005278 484 ----------------------------------DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLH 529 (704)
Q Consensus 484 ----------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh 529 (704)
...|+-||||+..++.+++..+...-.....|+++++|++|++|+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYI- 713 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYI- 713 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHH-
Confidence 124688999998777777776543335778899999999999999
Q ss_pred hcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC----C------------CCCcceeccccccccccCCcccCCC-
Q 005278 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG----E------------GDDSVIQTMTIATIGYMAPEYGSEG- 592 (704)
Q Consensus 530 ~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~----~------------~~~~~~~~~~~gt~~y~aPE~~~~~- 592 (704)
|++|||||||||.||++|++..|||+|||+|.... . +......+..+||.-|+|||++.+.
T Consensus 714 --H~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 714 --HDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred --HhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 66889999999999999999999999999998832 0 1122245567899999999987654
Q ss_pred --CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhh
Q 005278 593 --IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALD 670 (704)
Q Consensus 593 --~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 670 (704)
.|+.|+|+||+|||++||+. ||+...+....+...-+..+|.. ....++ ..+.-.++|.+
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~--------------~~~~e~slI~~ 853 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDP--------------EHPEEASLIRW 853 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccc--------------cchHHHHHHHH
Confidence 49999999999999999985 56553332222222211111111 111111 12233579999
Q ss_pred hcCCCCCCCCCHHHHHH
Q 005278 671 CCMESPEQRVSMKDAAA 687 (704)
Q Consensus 671 cl~~~P~~Rpt~~ev~~ 687 (704)
+++.||++||||.|+++
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999964
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.9e-34 Score=292.17 Aligned_cols=260 Identities=21% Similarity=0.231 Sum_probs=194.2
Q ss_pred CCccccccccCceEEEEEEE-CCCCEEEEEEeeccch-hhhHHHHHHHHHHHhcC-CCCCceEEeeeeeC--CeEEEEEe
Q 005278 417 FNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE-RASRSFDSECEILRSIR-HRNLIKIISNCCNI--DFKALVLE 491 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 491 (704)
|...+.||+|+||.||+|.. .+++.||+|+++.... ........|+.+++++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 56678999999999999985 4689999999865422 22233457888899885 99999999999887 88999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++ |++.+++......+++..+..++.|++.||+||| +.+++||||+|+||+++. +.+||+|||++........
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 997 5888888876567899999999999999999995 578999999999999999 9999999999987643221
Q ss_pred ceeccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcc----------
Q 005278 572 VIQTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT---------- 640 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 640 (704)
.....++..|+|||+.. ++.++.++||||+||++|||++|..||..... .....+..........
T Consensus 155 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 155 --YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred --cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 12235788999999754 45678899999999999999999999965321 1111222111111000
Q ss_pred --hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 641 --EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 641 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+..... ........++..+.+++.+||+.+|++||++.|+++
T Consensus 231 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGT-GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccCcccccc-cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 0000000000 000112245678999999999999999999999975
No 307
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=303.96 Aligned_cols=250 Identities=24% Similarity=0.288 Sum_probs=206.0
Q ss_pred CCCccccccccCceEEEEEEECC-CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
-|+++.-+|.|+||.||+|..++ +-..|.|++.......-+.+.-|++++..+.||+||++++.|...+...++.|||.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~ 112 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCG 112 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecC
Confidence 45566789999999999998654 55567788877777777889999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
||.....+-+-++.+.+.++.-+++|++.||.|| |+..|||||+|+.|||++-+|.++++|||.+..... .....
T Consensus 113 GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~L---Hs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~qkR 187 (1187)
T KOG0579|consen 113 GGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWL---HSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQKR 187 (1187)
T ss_pred CchHhHHHHHhccccchHHHHHHHHHHHHHHHHH---hhcchhhhhccccceEEEecCcEeeecccccccchh--HHhhh
Confidence 9999999887778899999999999999999999 678899999999999999999999999998764321 12233
Q ss_pred ccccccccccCCccc-----CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 575 TMTIATIGYMAPEYG-----SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
..+.|||.|||||+. ...+|+.++||||||+++.||..+.+|...+...... .+.. ..
T Consensus 188 DsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl-lKia----------------KS 250 (1187)
T KOG0579|consen 188 DSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL-LKIA----------------KS 250 (1187)
T ss_pred ccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH-HHHh----------------hc
Confidence 456899999999974 5678999999999999999999999998764332111 1111 11
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+....+...+..+.+++..|+..+|..||+++++++
T Consensus 251 ePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 251 EPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred CCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 12223344566778899999999999999999999865
No 308
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=3.4e-34 Score=294.16 Aligned_cols=266 Identities=21% Similarity=0.246 Sum_probs=197.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 489 (704)
++|+..+.||+|+||.||+|... +++.+|+|.++..... ....+.+|+.++++++||||+++.+++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 57888899999999999999965 6889999998754322 233567899999999999999999998877 889999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+||++ ++|.+++......+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 160 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL 160 (293)
T ss_pred ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc
Confidence 99997 5999998876667899999999999999999995 5789999999999999999999999999998765432
Q ss_pred CcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHH------------HHHhhcC
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH------------WVKESLP 636 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~------------~~~~~~~ 636 (704)
. ......+++.|+|||.+.+. .++.++|+||+|+++|||++|..||....... .... |......
T Consensus 161 ~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 161 K--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred c--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhcc
Confidence 1 12234578899999987654 46889999999999999999999997532111 0111 1000000
Q ss_pred CCcchhccccchhhhhhhhhhHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 637 DGLTEVVDANLVREEQAFSVKID-CLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....................+.. .+..+.+++.+|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred chhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00000000000000000000101 3566889999999999999999999975
No 309
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=278.25 Aligned_cols=260 Identities=20% Similarity=0.279 Sum_probs=201.7
Q ss_pred ccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 421 NLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
+.+|+|+||.|--+. +.+|.++|||++.+.......+.-+|++++.+.+ |+||++++++|++....|+|||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 589999999999887 7789999999998886667788899999999994 99999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEEeeeccceecCCCCC-----
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM---TAHVSDFGISKLLGEGDD----- 570 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~---~~kl~Dfgla~~~~~~~~----- 570 (704)
.++++++.. +.+....++..+|+.||.+| |.+||.|||+||+|||-.+.. -+||+||.++.-+.....
T Consensus 164 LshI~~~~~-F~E~EAs~vvkdia~aLdFl---H~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas 239 (463)
T KOG0607|consen 164 LSHIQKRKH-FNEREASRVVKDIASALDFL---HTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS 239 (463)
T ss_pred HHHHHHhhh-ccHHHHHHHHHHHHHHHHHH---hhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence 999998765 88899999999999999999 679999999999999986543 589999998865532211
Q ss_pred cceeccccccccccCCccc-----CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 571 SVIQTMTIATIGYMAPEYG-----SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.......+|+..|||||+. ....|+.++|.||+|||+|-|++|..||.+....+.. |-+.......++.+=.
T Consensus 240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG---WdrGe~Cr~CQ~~LFe 316 (463)
T KOG0607|consen 240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG---WDRGEVCRVCQNKLFE 316 (463)
T ss_pred CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC---ccCCCccHHHHHHHHH
Confidence 1222345789999999964 2346899999999999999999999999886554332 2111111110000000
Q ss_pred cchhhhh--hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQ--AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+..... ....+...+.+..+++...+..||.+|.++.++++
T Consensus 317 sIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 317 SIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 1111111 11233456677888999999999999999998876
No 310
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.4e-34 Score=295.80 Aligned_cols=246 Identities=28% Similarity=0.328 Sum_probs=196.6
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
.|...+.||+|+||.||+|+.. ++..+|+|.+.... ......+..|++++++++|||++++++++.+.+..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3667789999999999999854 68999999986432 2334568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++ |++.+.+......+++..+..++.+++.|+.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~--- 178 (317)
T cd06635 106 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA--- 178 (317)
T ss_pred CCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc---
Confidence 996 5888888766666899999999999999999994 578999999999999999999999999998764322
Q ss_pred ceeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 572 VIQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
....+++.|+|||++. .+.++.++|||||||++|||++|+.||..... ......+.....+
T Consensus 179 ---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~------------ 242 (317)
T cd06635 179 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESP------------ 242 (317)
T ss_pred ---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhccCC------------
Confidence 2345888999999863 46688999999999999999999999865311 1111111111000
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
......++..+.+++.+|++.+|++||++.|+++..
T Consensus 243 -----~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 243 -----TLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -----CCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 011113345688999999999999999999998864
No 311
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.3e-34 Score=289.77 Aligned_cols=247 Identities=26% Similarity=0.324 Sum_probs=200.8
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
+|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+....++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999865 68999999987543 2345678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+++++|.+++... ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999999766 45889999999999999999995 5789999999999999999999999999988764332
Q ss_pred ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 572 VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
......|+..|+|||++.+..++.++|+||||+++|+|++|+.||...... ...+.......
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~-------------- 216 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQET-------------- 216 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhcc--------------
Confidence 123346888999999998888999999999999999999999999763221 11111111110
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCH--HHHH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSM--KDAA 686 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~--~ev~ 686 (704)
.....+...+..+.+++.+||+.||.+||++ +|+.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0011122345678899999999999999999 6553
No 312
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.5e-34 Score=293.45 Aligned_cols=268 Identities=22% Similarity=0.249 Sum_probs=200.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|+..+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888899999999999999865 58899999886532 2234678999999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++++.+..+... ...+++..+..++.+++.|++||| +.+++|+|++|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~- 155 (288)
T cd07833 81 YVERTLLELLEAS-PGGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA- 155 (288)
T ss_pred cCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc-
Confidence 9998766655543 344899999999999999999995 57899999999999999999999999999987654332
Q ss_pred ceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHH-HHHHhhcCCCcchhc--cccc
Q 005278 572 VIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLK-HWVKESLPDGLTEVV--DANL 647 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~ 647 (704)
.......++..|+|||++.+. .++.++||||||+++|+|++|+.||......+.... .......+....... ++..
T Consensus 156 ~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07833 156 SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRF 235 (288)
T ss_pred ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccc
Confidence 122334678899999998887 889999999999999999999999875322110000 000000000000000 0000
Q ss_pred hh---------hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VR---------EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~---------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. .......+..++.++.+++.+||+.+|++||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 236 AGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00 00000111223677899999999999999999999975
No 313
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.8e-34 Score=298.19 Aligned_cols=252 Identities=27% Similarity=0.330 Sum_probs=199.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|+..+.||+|++|.||+|... +++.+|+|.+..... ...+.+..|+++++.++||||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999865 589999999875432 24456889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 491 EFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 491 e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
||+.+++|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 157 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEP 157 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccc
Confidence 999999999998754 356899999999999999999995 5789999999999999999999999999987653221
Q ss_pred Ccc---------------------------eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccc
Q 005278 570 DSV---------------------------IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFI 622 (704)
Q Consensus 570 ~~~---------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~ 622 (704)
... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||.....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~ 237 (316)
T cd05574 158 PPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR 237 (316)
T ss_pred cccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch
Confidence 100 01123578899999999988899999999999999999999999975322
Q ss_pred ccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC----HHHHHH
Q 005278 623 GEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS----MKDAAA 687 (704)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt----~~ev~~ 687 (704)
. ..+.. +..... ........+..+.+++.+|++.+|++||+ +.|+++
T Consensus 238 ~----~~~~~---------~~~~~~-----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 D----ETFSN---------ILKKEV-----TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred H----HHHHH---------HhcCCc-----cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 1 11111 000000 00011114567899999999999999999 666655
No 314
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.1e-34 Score=286.78 Aligned_cols=251 Identities=25% Similarity=0.300 Sum_probs=204.1
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKALVL 490 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 490 (704)
+|...+.||+|++|.||+|... +++.|++|++..... ...+.+.+|+.++++++||||+++++.+... ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677789999999999999965 689999999876542 4467789999999999999999999999888 8899999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+++++|.+++.... .+++..++.++.+++.|++||| +.+++|+||+|+||+++.++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 156 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIET 156 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEecccccc
Confidence 9999999999998665 6899999999999999999995 57899999999999999999999999999987755432
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
........++..|+|||...+...+.++||||||+++|++++|..||..... .......... .
T Consensus 157 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~-------------~ 219 (260)
T cd06606 157 GEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGS-------------S 219 (260)
T ss_pred cccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccc-------------c
Confidence 1112345688999999999888899999999999999999999999976431 1111010000 0
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
......+...+..+.+++.+|++.+|++||++.|+++
T Consensus 220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 0001122233567889999999999999999999975
No 315
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.7e-34 Score=295.63 Aligned_cols=253 Identities=25% Similarity=0.297 Sum_probs=193.2
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|...+.||+|+||.||++... +++.+|+|.+.... ......+..|+.++.++. |+||+++++++..+...+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999854 68999999986543 234567889999999996 99999999999998899999999
Q ss_pred cCCCCHHHHH---hh-CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 493 MPNGSLEKWL---YS-HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 493 ~~~gsL~~~l---~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
+.. ++.++. .. ....+++..+..++.+++.|++|||+ +.+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 864 555543 22 23558999999999999999999973 358999999999999999999999999999765432
Q ss_pred CCcceeccccccccccCCcccCCC---CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEG---IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.. .....|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ....-......... +
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~-----~ 229 (288)
T cd06616 162 IA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGDP-----P 229 (288)
T ss_pred Cc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCCC-----C
Confidence 21 1233578899999998766 68899999999999999999999986532 11111111110000 0
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.+.. .....++.++.+++..|++.+|++||++.||++.
T Consensus 230 ~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 230 ILSN-----SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred cCCC-----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0000 0112356678899999999999999999999763
No 316
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-35 Score=281.18 Aligned_cols=267 Identities=21% Similarity=0.323 Sum_probs=221.0
Q ss_pred HHHHHHhCCCCccccccccCceEEEEEEEC------CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeee
Q 005278 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLF------DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNC 480 (704)
Q Consensus 408 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~ 480 (704)
.++.....+++...++.+|.||.||.|.|. +.+.|-||.++.... -....+..|.-.+..+.|||+.++.+++
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ 356 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVS 356 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEE
Confidence 344445567888888999999999999654 345566777665443 2345678888899999999999999988
Q ss_pred ee-CCeEEEEEeccCCCCHHHHHh-----h--CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 005278 481 CN-IDFKALVLEFMPNGSLEKWLY-----S--HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM 552 (704)
Q Consensus 481 ~~-~~~~~lv~e~~~~gsL~~~l~-----~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~ 552 (704)
.+ .+..++++.++.-|+|..|+. + ..+.....+...++.|++.|++|| |+.+|||.||.++|++||+.-
T Consensus 357 ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hl---h~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 357 IEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHL---HNHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHH---HhcCcccchhhhhcceehhhe
Confidence 55 567889999999999999998 2 234567788889999999999999 568899999999999999999
Q ss_pred cEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHH
Q 005278 553 TAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWV 631 (704)
Q Consensus 553 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~ 631 (704)
.+||+|=.+++.+-+.+..........+..||+||.+....|+.++|||||||++|||+| |+.||.+..+-+ ..++.
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE--m~~yl 511 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE--MEHYL 511 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--HHHHH
Confidence 999999999999988888888888888999999999999999999999999999999999 999997743322 12222
Q ss_pred HhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHh
Q 005278 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKF 696 (704)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~ 696 (704)
.++.+...|..|++++..+|.-||+.+|++||+++|++.-|.++....
T Consensus 512 -----------------kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 512 -----------------KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred -----------------hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 223344566789999999999999999999999999999999886544
No 317
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.3e-33 Score=285.31 Aligned_cols=249 Identities=19% Similarity=0.234 Sum_probs=194.5
Q ss_pred HHHHHHhCCCCccccc--cccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 408 LDIQRATNGFNECNLL--GTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 408 ~~~~~~~~~~~~~~~i--g~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
.+.....++|+..+.+ |+|+||.||++.. .++..+|+|.+....... . |+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~--e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA---I--EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch---h--hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444555677777776 9999999999985 468899999986432111 1 22222222 799999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeeccc
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFGIS 562 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfgla 562 (704)
+..++||||+++|+|.+++.... .+++..+..++.|+++|++|| |+.+++||||+|+||+++.++ .++|+|||++
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~l---H~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~ 157 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDL---HKHNIIHNDIKLENVLYDRAKDRIYLCDYGLC 157 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEEeCCCCeEEEecCccc
Confidence 99999999999999999998664 689999999999999999999 557899999999999999988 9999999999
Q ss_pred eecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh
Q 005278 563 KLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
...... ....++..|+|||++.+..++.++||||||+++|||++|+.||............|.... ..
T Consensus 158 ~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~----- 225 (267)
T PHA03390 158 KIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QK----- 225 (267)
T ss_pred eecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-cc-----
Confidence 866432 123588999999999988899999999999999999999999985444333334443221 00
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC-HHHHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS-MKDAAA 687 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt-~~ev~~ 687 (704)
........+..+.+++.+|++.+|.+||+ ++|+++
T Consensus 226 ----------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 226 ----------KLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ----------cCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00111134567889999999999999996 688863
No 318
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.1e-33 Score=294.07 Aligned_cols=268 Identities=20% Similarity=0.223 Sum_probs=196.2
Q ss_pred CCCccccccccCceEEEEEEEC---CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF---DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 487 (704)
+|+..+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778889999999999999864 47999999987633 33345678899999999999999999999888 7899
Q ss_pred EEEeccCCCCHHHHHhhC----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC----CCcEEEeee
Q 005278 488 LVLEFMPNGSLEKWLYSH----NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE----NMTAHVSDF 559 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~----~~~~kl~Df 559 (704)
+||||+++ ++.+++... ...++...++.++.|++.|++|| |+.+|+||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l---H~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL---HSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH---HhCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 777776532 23578899999999999999999 5678999999999999999 999999999
Q ss_pred ccceecCCCCC-cceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCcccccc--------ccHHH
Q 005278 560 GISKLLGEGDD-SVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGE--------MSLKH 629 (704)
Q Consensus 560 gla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~--------~~~~~ 629 (704)
|++........ ........+++.|+|||++.+ ..++.++|||||||++|||++|+.||....... ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987643322 112233467899999998765 457889999999999999999999997643322 01111
Q ss_pred HHHhhcC------------CCcchh---c-cccchhhhhhhhhh--HHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 630 WVKESLP------------DGLTEV---V-DANLVREEQAFSVK--IDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 630 ~~~~~~~------------~~~~~~---~-~~~~~~~~~~~~~~--~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
++..... ...... . .............. .....++.+++.+|++.||++||++.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1110000 000000 0 00000000000000 133467889999999999999999999975
No 319
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.2e-34 Score=292.64 Aligned_cols=243 Identities=23% Similarity=0.313 Sum_probs=195.5
Q ss_pred ccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHH
Q 005278 421 NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLE 499 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 499 (704)
.+||+|+||.||+|.. .+++.||+|.+..........+.+|+.+++.++|+|++++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5799999999999986 478999999986554455667899999999999999999999999999999999999999999
Q ss_pred HHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccc
Q 005278 500 KWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIA 579 (704)
Q Consensus 500 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g 579 (704)
+++... .+++.....++.|++.|++||| +.+++||||+|+||++++++.++|+|||++........ ......+
T Consensus 106 ~~~~~~--~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~ 178 (292)
T cd06657 106 DIVTHT--RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSLVG 178 (292)
T ss_pred HHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccccccc
Confidence 987543 3788999999999999999995 57899999999999999999999999999876543221 1233468
Q ss_pred cccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHH
Q 005278 580 TIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKID 659 (704)
Q Consensus 580 t~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (704)
++.|+|||+..+..++.++|+||+||++|||++|..||..... ...........+..+. ....
T Consensus 179 ~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~---------------~~~~ 241 (292)
T cd06657 179 TPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLK---------------NLHK 241 (292)
T ss_pred CccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccC---------------Cccc
Confidence 8999999999888899999999999999999999999865211 1111111111111110 0112
Q ss_pred HHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 660 CLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 660 ~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+..+.+++.+|++.+|.+||++.|+++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 3456778999999999999999999976
No 320
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=6.4e-34 Score=286.32 Aligned_cols=248 Identities=23% Similarity=0.357 Sum_probs=199.5
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|+||.||+|... +|..+|+|.+.... ....+.+.+|+++++.++|+||+++++.+......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4777889999999999999865 58899999986542 23445788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeeccceecCCCCC
Q 005278 493 MPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfgla~~~~~~~~ 570 (704)
+++++|.+++... ...+++..+..++.++++|++||| +.+++|+||+|+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 9999999999754 335789999999999999999995 57899999999999999875 469999999987643221
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
......|++.|+|||+..+..++.++||||||+++||+++|..||.... ..++............
T Consensus 158 --~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~-------- 222 (257)
T cd08225 158 --LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGYFAPI-------- 222 (257)
T ss_pred --cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcccCCCC--------
Confidence 1223458899999999988889999999999999999999999986532 2233322221111110
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+..+.+++.+|++.+|++||++.|+++
T Consensus 223 ------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 ------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred ------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1123456888999999999999999999975
No 321
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.8e-34 Score=290.99 Aligned_cols=264 Identities=23% Similarity=0.300 Sum_probs=196.6
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
|+..+.||.|++|.||+|... +|+.||+|++..... ...+.+.+|+++++.++|||++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999864 799999999875432 23356888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+ ++|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~-- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR-- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc--
Confidence 5 69999987654 45899999999999999999995 57899999999999999999999999999976533211
Q ss_pred eeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-CCC--cchh-ccccc
Q 005278 573 IQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-PDG--LTEV-VDANL 647 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~--~~~~-~~~~~ 647 (704)
......++..|+|||++.+. .++.++||||||+++|||++|+.||....... .+....+... +.. +... ..+..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSLPDY 233 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhchhh
Confidence 11223568899999987654 57889999999999999999999986532111 1111111100 000 0000 00000
Q ss_pred hhh------hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VRE------EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
... ..........+..+.+++.+|++.+|++||+++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 234 KPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0000112233467889999999999999999999974
No 322
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=8.4e-34 Score=290.48 Aligned_cols=265 Identities=22% Similarity=0.273 Sum_probs=198.6
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEEEEEe
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKALVLE 491 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 491 (704)
|+..+.||+|+||.||+|+.. +++.+|+|++.... ......+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567789999999999999865 58999999997653 23345688899999999999999999999888 78999999
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|+++ +|.+++......+++..+..++.|++.|++||| +.+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~- 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS- 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc-
Confidence 9975 899988766556899999999999999999995 46899999999999999999999999999987754332
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-C--CCcchhcc---
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-P--DGLTEVVD--- 644 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~--- 644 (704)
.......++..|+|||.+.+ ..++.++||||||+++|||++|+.||...... ..+........ + ..+....+
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07840 156 ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLPW 234 (287)
T ss_pred ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccchh
Confidence 12233457888999997654 45789999999999999999999998753211 11111111000 0 00000000
Q ss_pred -----ccchhhhhhhhhhHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 -----ANLVREEQAFSVKID-CLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 -----~~~~~~~~~~~~~~~-~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.............. ++..+.+++.+|++.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 235 FENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000001111 3678899999999999999999999975
No 323
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.2e-33 Score=287.39 Aligned_cols=242 Identities=22% Similarity=0.282 Sum_probs=185.7
Q ss_pred cccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHh---cCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 422 LLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRS---IRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~---l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
.||+|+||.||++... +++.+|+|.+..... .....+.+|..+++. .+||||+.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 689999998865321 122334445444433 479999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||++++++.++++|||++....... .
T Consensus 81 ~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~----~ 152 (279)
T cd05633 81 GGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (279)
T ss_pred CCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----c
Confidence 999999987654 3899999999999999999995 5789999999999999999999999999987653322 1
Q ss_pred ccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....|+..|+|||... +..++.++||||+||++|||++|..||........ ......... ..
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~------~~--------- 215 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT------VN--------- 215 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhc------CC---------
Confidence 2346899999999876 45688999999999999999999999975422111 111110000 00
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAAK 688 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~~ 688 (704)
...+..++.++.+++.+|++.||++|| +++|+++.
T Consensus 216 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 216 VELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred cCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 011223456788999999999999999 58888664
No 324
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8.5e-34 Score=293.92 Aligned_cols=270 Identities=21% Similarity=0.265 Sum_probs=194.8
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC------
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNID------ 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 484 (704)
.++|+..+.||+|+||.||+|+.. +++.||||.+..... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457899999999999999999864 689999998864432 22345678999999999999999999986654
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 485 --FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 485 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
..++||||+. +++.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 166 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADFGLA 166 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcCCCc
Confidence 4599999996 4888888766656899999999999999999995 468999999999999999999999999999
Q ss_pred eecCCCCCc--ceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccc-cHHHHHHhhcCCC
Q 005278 563 KLLGEGDDS--VIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEM-SLKHWVKESLPDG 638 (704)
Q Consensus 563 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~ 638 (704)
......... .......++..|+|||.+.+. .++.++||||||+++|||++|..||........ ..........+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (310)
T cd07865 167 RAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPE 246 (310)
T ss_pred ccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChh
Confidence 866432211 112234578899999987654 478899999999999999999999865321100 0000011111110
Q ss_pred c-chh-----cc----cc-chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 L-TEV-----VD----AN-LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 ~-~~~-----~~----~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. ... .+ +. ............-....+.+++.+||+.||++||+++|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 247 VWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred hcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 000 00 00 00000000000012345678999999999999999999975
No 325
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=325.64 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=201.3
Q ss_pred HhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
.+-++.....||.|.||.||-|. ..+|+..|||-++.+.. .......+|+.++..++|||+|+++|+-...+..++.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34567778899999999999998 56799999998876543 3345688999999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
||||++|+|.+.+... +..++.....+..|++.|++|| |+.|||||||||.||+++.+|.+|.+|||.|..+....
T Consensus 1313 MEyC~~GsLa~ll~~g-ri~dE~vt~vyt~qll~gla~L---H~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHG-RIEDEMVTRVYTKQLLEGLAYL---HEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHhccCcHHHHHHhc-chhhhhHHHHHHHHHHHHHHHH---HhcCceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999988643 3367777778899999999999 55789999999999999999999999999999886542
Q ss_pred Ccc--eeccccccccccCCcccCCCC---CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 570 DSV--IQTMTIATIGYMAPEYGSEGI---ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 570 ~~~--~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
.+. .-....||+.|||||++.+.. ...++||||+|||+.||+||+.||...... | ..+..
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne------~---------aIMy~ 1453 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE------W---------AIMYH 1453 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch------h---------HHHhH
Confidence 221 122347999999999986543 556899999999999999999999774321 1 11111
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. +.+.....|+..+.+-.+++..|+..||++|.++.|+++
T Consensus 1454 V---~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1454 V---AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred H---hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 1 111223334446677788999999999999998887754
No 326
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=7.3e-34 Score=293.21 Aligned_cols=270 Identities=24% Similarity=0.277 Sum_probs=199.9
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC----
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNID---- 484 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 484 (704)
...++|+..+.||+|+||.||+|... +++.||+|.++.... .....+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 589999999875432 23356788999999999999999999987654
Q ss_pred ------eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 485 ------FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 485 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
..++|+||+++ ++.+.+......+++..+..++.|++.|++||| +.+|+||||+|+||++++++.+||+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl~d 159 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKLAD 159 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEeCc
Confidence 78999999976 788888766556899999999999999999994 57899999999999999999999999
Q ss_pred eccceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh---h
Q 005278 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE---S 634 (704)
Q Consensus 559 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~---~ 634 (704)
||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+...... .
T Consensus 160 fg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~~ 237 (302)
T cd07864 160 FGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGSP 237 (302)
T ss_pred ccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCC
Confidence 999987644322 11223346788999997754 4578899999999999999999999975221 1111111110 0
Q ss_pred cCCCcchhccc--------cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 635 LPDGLTEVVDA--------NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 635 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+..+..+... .-.............+..+.+++..||+.+|++||++.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00001111000 000000000111124567899999999999999999999975
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-33 Score=284.38 Aligned_cols=242 Identities=26% Similarity=0.304 Sum_probs=194.0
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||.|++|.||+|+.. +++.+|+|++.... ....+.+.+|+.+++.++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999965 58999999987543 23446789999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccc
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 578 (704)
.+++.+.. .+++..+..++.|++.|++|| |+.+++|+||+|+||+++.++.++|+|||++....... ......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~l---H~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~~ 153 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYL---HNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTFC 153 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---cccccc
Confidence 99998653 378899999999999999999 56889999999999999999999999999998764432 122346
Q ss_pred ccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
+++.|+|||.+.+..++.++|+||+|+++|++++|..||...... .......... .. .....+.
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~--------~~-----~~~~~~~ 217 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYNDILK--------GN-----GKLEFPN 217 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHHHHhc--------cC-----CCCCCCc
Confidence 788999999988888999999999999999999999999764321 1111111110 00 0001111
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCC-----HHHHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVS-----MKDAAA 687 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt-----~~ev~~ 687 (704)
..+..+.+++.+||+.+|++||+ ++|+++
T Consensus 218 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 218 YIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred ccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 22567889999999999999999 666644
No 328
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.8e-34 Score=297.59 Aligned_cols=267 Identities=22% Similarity=0.272 Sum_probs=195.9
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----eE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERASRSFDSECEILRSIRHRNLIKIISNCCNID-----FK 486 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 486 (704)
+++|++.+.||+|+||.||+|.. .+|+.||+|.+.... ......+.+|+.++++++||||+++++++.... ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999985 478999999986432 234456788999999999999999999875543 57
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++|+||+++ ++.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~lv~e~~~~-~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 157 (336)
T cd07849 84 YIVQELMET-DLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD 157 (336)
T ss_pred EEEehhccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence 899999964 888877543 4889999999999999999995 5789999999999999999999999999998764
Q ss_pred CCCCcc-eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC----Ccc
Q 005278 567 EGDDSV-IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD----GLT 640 (704)
Q Consensus 567 ~~~~~~-~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~----~~~ 640 (704)
...... ......|++.|+|||.+.+ ..++.++||||+||++|+|++|+.||.+.... ....+....... .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~ 235 (336)
T cd07849 158 PEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL--HQLNLILGVLGTPSQEDLN 235 (336)
T ss_pred ccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHH
Confidence 332211 1223468899999998654 56889999999999999999999999652210 111111111110 011
Q ss_pred hhccccchh---------hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 641 EVVDANLVR---------EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 641 ~~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
.+.+..... ...........+.++.+++.+||+.+|++||++.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 111100000 000000111235678899999999999999999999765
No 329
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.3e-33 Score=284.13 Aligned_cols=248 Identities=27% Similarity=0.368 Sum_probs=203.6
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|...+.||+|+||.||++... ++..+|+|++..... .....+.+|+++++.++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4778889999999999999965 689999999875432 4556788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 493 MPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 493 ~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+++++|.+++... ...+++..+..++.+++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999864 366899999999999999999995 5689999999999999999999999999998764432
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
.......|++.|+|||...+..++.++||||+|+++|+|++|+.||.... ..............
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~--------- 221 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQYP--------- 221 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCCCC---------
Confidence 12233468899999999888889999999999999999999999986532 11221111111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..+..++..+.+++.+||..+|++||++.|+++
T Consensus 222 -----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 222 -----PIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 011134567889999999999999999999975
No 330
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.2e-33 Score=292.46 Aligned_cols=267 Identities=23% Similarity=0.277 Sum_probs=197.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCNI--DFKA 487 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 487 (704)
..++|+..+.||+|+||.||+|... +|+.||+|.++..... ....+.+|+.++++++|+||+++++++.+. +..+
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 3468999999999999999999864 6899999998754322 223466899999999999999999998764 5689
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||+. ++|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||++.....
T Consensus 85 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 85 LVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 9999996 4899988866566899999999999999999995 57899999999999999999999999999987654
Q ss_pred CCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC---cc-hh
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG---LT-EV 642 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 642 (704)
.... .....+++.|+|||.+.+ ..++.++||||+||++|||++|+.||......+ .+.. +....... .. ..
T Consensus 161 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~-~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 161 PAKP--MTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDL-IIQLLGTPNESIWPGF 236 (309)
T ss_pred ccCC--CCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHhcCCCChhhchhh
Confidence 3211 222345788999998765 457899999999999999999999997532111 1111 11110000 00 00
Q ss_pred ccc----c--chhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 643 VDA----N--LVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 643 ~~~----~--~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+. . ..... .........++.+.+++.+|++.||++||++.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 000 0 00000 000001113566788999999999999999999964
No 331
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=2e-33 Score=287.24 Aligned_cols=265 Identities=22% Similarity=0.312 Sum_probs=198.3
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
+|+..+.||+|++|.||+|+.. +|+.||||.+..... .....+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5788899999999999999965 689999999875532 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 494 PNGSLEKWLYSHN--YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 494 ~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
++ +|.+++.... ..+++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||++........
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 85 8999887543 45899999999999999999995 57899999999999999999999999999976533211
Q ss_pred ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-CC--Ccchhcc---
Q 005278 572 VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-PD--GLTEVVD--- 644 (704)
Q Consensus 572 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~--- 644 (704)
......++..|+|||.+.+ ..++.++|||||||++|++++|+.||.+....+ .......... +. .+....+
T Consensus 156 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07836 156 -TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPE 233 (284)
T ss_pred -ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCch
Confidence 1223457889999998765 457889999999999999999999997532211 1111111000 00 0000000
Q ss_pred --ccchh--hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 --ANLVR--EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 --~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..... ..........++..+.+++..|++.||++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 234 YKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000 00001112234567889999999999999999999974
No 332
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.4e-33 Score=290.06 Aligned_cols=265 Identities=21% Similarity=0.249 Sum_probs=194.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCe-----
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIR-HRNLIKIISNCCNIDF----- 485 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 485 (704)
++|+..+.||+|+||.||+|... +++.||+|.+..... .....+.+|+.++++++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999864 689999998765432 22356888999999995 6999999999877665
Q ss_pred EEEEEeccCCCCHHHHHhhC----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeec
Q 005278 486 KALVLEFMPNGSLEKWLYSH----NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFG 560 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfg 560 (704)
.++||||+++ ++.+++... ...+++..+..++.||+.||+|| |+++|+||||+|+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~L---H~~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHC---HKHGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHH---HHCCeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 898888643 23579999999999999999999 4578999999999999998 8999999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh-cCCC
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES-LPDG 638 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~-~~~~ 638 (704)
++..+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||.+..... .+....... .+..
T Consensus 157 ~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~ 233 (295)
T cd07837 157 LGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTE 233 (295)
T ss_pred cceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCCh
Confidence 9986533211 1122356889999998765 457899999999999999999999986522111 011111100 0000
Q ss_pred --cchhcc-------ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 --LTEVVD-------ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 --~~~~~~-------~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+..... +...... ........+.++.+++..|++.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 234 QVWPGVSKLRDWHEFPQWKPQD-LSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhCcchhhccchhhcCcccchh-HHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000000 0000000 00011234667889999999999999999999964
No 333
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.7e-33 Score=287.67 Aligned_cols=263 Identities=23% Similarity=0.287 Sum_probs=200.4
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
|+..+.||+|++|.||+|... +++.+|+|.+..... .....+.+|++++++++|+||+++++++..++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 566789999999999999864 689999999865432 24567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
++ ++.+++......+++..+..++.+++.|++||| +.+|+|+||+|+||+++.++.++|+|||.+....... ..
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~~ 154 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--RP 154 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--cc
Confidence 75 898888876567899999999999999999995 5789999999999999999999999999998775432 11
Q ss_pred eccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC----cchhcc----
Q 005278 574 QTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG----LTEVVD---- 644 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---- 644 (704)
.....++..|+|||.+.+. .++.++|+||+|+++|+|+||+.||......+ .+.. ........ +.....
T Consensus 155 ~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd05118 155 YTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID-QLFK-IFRTLGTPDPEVWPKFTSLARN 232 (283)
T ss_pred ccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHcCCCchHhcccchhhhhh
Confidence 2234578899999988766 78999999999999999999999986532111 0101 00000000 000000
Q ss_pred --ccchhh--hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 --ANLVRE--EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 --~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...... .........++.++.+++.+||+.||.+||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 233 YKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000 0001122345678999999999999999999999975
No 334
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=9.1e-34 Score=291.35 Aligned_cols=253 Identities=22% Similarity=0.265 Sum_probs=195.3
Q ss_pred hCCCCccccccccCceEEEEEEECC-CCEEEEEEeeccc-hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQL-ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 490 (704)
.++|+..+.||+|+||.||+|...+ ++.||||.++... ......+..|+.++.+.. ||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 4678889999999999999999764 8999999987543 223345666777776664 999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||++ +++.++.......+++..+..++.+++.|++|||. ..+|+||||+|+||++++++.+||+|||++..+.....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~ 170 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA 170 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc
Confidence 9985 47888776655568999999999999999999963 25899999999999999999999999999876643221
Q ss_pred cceeccccccccccCCcccCCCC----CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGI----ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
.....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.........+..+.....+
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~---------- 237 (296)
T cd06618 171 ---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP---------- 237 (296)
T ss_pred ---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC----------
Confidence 12335788999999887553 7889999999999999999999986522111111111111000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+....++.++.+++.+||+.||++||++.++++.
T Consensus 238 ------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 ------SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000111245678899999999999999999999765
No 335
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.8e-33 Score=282.42 Aligned_cols=247 Identities=26% Similarity=0.372 Sum_probs=201.6
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... .....+.+|++++++++|+|++++++++.+....+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 688999999876543 3456789999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+++++|.+++... ..+++..+..++.|++.|+.|| |+.+|+||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~l---H~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYL---HEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999999765 4589999999999999999999 5678999999999999999999999999999877543321
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........ ....
T Consensus 156 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~~------------- 216 (254)
T cd06627 156 -DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-QDDH------------- 216 (254)
T ss_pred -ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-ccCC-------------
Confidence 2334688999999998888889999999999999999999999865321 11111100 0000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...+..+.+++.+|++.+|++||++.|++.
T Consensus 217 -~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 217 -PPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 0011123456788999999999999999999964
No 336
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.3e-33 Score=289.34 Aligned_cols=259 Identities=19% Similarity=0.193 Sum_probs=184.2
Q ss_pred hCCCCccccccccCceEEEEEEECC----CCEEEEEEeeccchhh-----------hHHHHHHHHHHHhcCCCCCceEEe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD----GTNVAIKVFNLQLERA-----------SRSFDSECEILRSIRHRNLIKIIS 478 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~~ 478 (704)
.++|.+.+.||+|+||.||+|...+ +..+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999998654 4566677543221110 011223334455678999999999
Q ss_pred eeeeCC----eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 479 NCCNID----FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 479 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
++.... ..++++|++.. ++.+.+... ...++..+..++.|++.|++|| |+.+|+||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~l---H~~~iiHrDiKp~Nill~~~~~~ 165 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYI---HEHGISHGDIKPENIMVDGNNRG 165 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCcE
Confidence 765543 34678887743 666666543 2357788899999999999999 45789999999999999999999
Q ss_pred EEeeeccceecCCCCCc-----ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHH
Q 005278 555 HVSDFGISKLLGEGDDS-----VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKH 629 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~ 629 (704)
+|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||....... ....
T Consensus 166 ~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~ 244 (294)
T PHA02882 166 YIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIH 244 (294)
T ss_pred EEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHH
Confidence 99999999876432211 11223469999999999999999999999999999999999999998742211 1111
Q ss_pred HHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 630 WVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
-..... +..+.... .....+++.+.+++..|++.+|++||++.++++.+
T Consensus 245 ~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDF---IKRLHEGK--------IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHH---HHHhhhhh--------hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 111000 00000000 01123456788999999999999999999999876
No 337
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-33 Score=287.59 Aligned_cols=243 Identities=23% Similarity=0.291 Sum_probs=191.2
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||+||++... +|+.+|+|.+.... ......+..|++++++++||||+++.+.+...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999854 68999999986532 12334567899999999999999999999999999999999999999
Q ss_pred HHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccc
Q 005278 499 EKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMT 577 (704)
Q Consensus 499 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 577 (704)
.+++.... ..+++..+..++.|++.|+.|| |+.+++||||+|+||+++.++.++|+|||.+....... .....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~l---H~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~ 154 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHL---HQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKGR 154 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---ccccc
Confidence 99997654 3589999999999999999999 55789999999999999999999999999987654321 12234
Q ss_pred cccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhh
Q 005278 578 IATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVK 657 (704)
Q Consensus 578 ~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (704)
.++..|+|||+..+..++.++||||+||++|+|++|+.||...... ........... .. ....+
T Consensus 155 ~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~--------------~~~~~ 218 (277)
T cd05577 155 AGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTL-EM--------------AVEYP 218 (277)
T ss_pred cCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccc-cc--------------cccCC
Confidence 5788999999998888999999999999999999999999653221 11111111000 00 00111
Q ss_pred HHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 658 IDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 658 ~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
...+..+.+++.+||+.+|++|| ++.++++
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 23356788999999999999999 5555543
No 338
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6e-34 Score=287.88 Aligned_cols=245 Identities=25% Similarity=0.308 Sum_probs=194.2
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||.||+++.. +|+.+|+|.+..... ...+.+.+|++++++++||||+++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 499999999865432 3456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC------cc
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD------SV 572 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~------~~ 572 (704)
.+++...+ .+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||++........ ..
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~ 156 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK 156 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence 99998655 5899999999999999999995 57899999999999999999999999999876533211 11
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
......++..|+|||.......+.++||||||+++||+++|..||..... ............
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~------------- 218 (265)
T cd05579 157 EDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQNILNGKI------------- 218 (265)
T ss_pred cccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCCc-------------
Confidence 22334678899999998888899999999999999999999999865321 111111100000
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
..+.....+..+.+++.+|++.+|++||++.++.+.|
T Consensus 219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 219 EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0000001256788999999999999999996555444
No 339
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.4e-33 Score=297.18 Aligned_cols=263 Identities=21% Similarity=0.224 Sum_probs=195.5
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC------
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI------ 483 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 483 (704)
..++|+..+.||+|+||.||+|.. .+++.||+|.+.... ......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999985 478999999986432 23345677899999999999999999988643
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
...++||||+. ++|.+.+... ++...+..++.|++.||+|| |+.+|+||||||+||+++.++.+||+|||+++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 166 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHL---HSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 166 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHH---HhCCeeeCCCCHHHEEECCCCCEEEccCccce
Confidence 35699999996 5888887644 78888999999999999999 45789999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC--C---
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD--G--- 638 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~--- 638 (704)
....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+.......... .
T Consensus 167 ~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 242 (353)
T cd07850 167 TAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIEQLGTPSDEFMS 242 (353)
T ss_pred eCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHH
Confidence 7643221 22345788999999999999999999999999999999999999653210 0000000000000 0
Q ss_pred --------------------cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 639 --------------------LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 639 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.......... ..........+..+.+++.+|++.||++||++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~ 310 (353)
T cd07850 243 RLQPTVRNYVENRPKYAGYSFEELFPDVLFP-PDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQ 310 (353)
T ss_pred HhhhhhhHHhhcCCCCCCcchhhhCcccccC-cccccccccchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 00000000000 0000001123556889999999999999999999964
No 340
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-33 Score=295.27 Aligned_cols=269 Identities=23% Similarity=0.268 Sum_probs=197.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC--CeE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSI-RHRNLIKIISNCCNI--DFK 486 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 486 (704)
..++|+..+.||+|+||.||+|... +++.+|+|++.... ......+.+|+.+++++ +||||+++++++... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4568888999999999999999865 68899999885421 22345577899999999 999999999998653 367
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++....
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~ 158 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLS 158 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhccc
Confidence 99999997 5999988765 5788999999999999999995 5789999999999999999999999999998764
Q ss_pred CCCCc---ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc--CC---
Q 005278 567 EGDDS---VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL--PD--- 637 (704)
Q Consensus 567 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~--- 637 (704)
..... .......|+..|+|||++.+ ..++.++||||||+++|+|+||+.||......+. ......... ..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (337)
T cd07852 159 ELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQ-LEKIIEVIGPPSAEDI 237 (337)
T ss_pred cccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCCHHHH
Confidence 43221 12223458899999997754 5678899999999999999999999965322111 000000000 00
Q ss_pred -----C-cchhccccchhh-hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 638 -----G-LTEVVDANLVRE-EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 638 -----~-~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
. .....+...... .........++..+.+++.+||+.+|++||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 238 ESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 0 000000000000 00001111246778999999999999999999999864
No 341
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1e-33 Score=284.74 Aligned_cols=246 Identities=29% Similarity=0.347 Sum_probs=201.0
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|++.+.||+|+||.||+++.. +++.+|+|.+.... ......+.+|++++++++|+||+++.+++.+....++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999854 68899999987543 23345678899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 493 MPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 493 ~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
+++++|.+++.. .+..+++..++.++.+++.|++|| |+.+++|+||+|+||++++++.+|++|||++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~l---h~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQAL---HEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH---hhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 999999999875 235589999999999999999999 5688999999999999999999999999999876543
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
......+++.|+|||...+..++.++|+||+|+++||+++|+.||...... .+...+.. ...
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~---~~~---------- 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQR---GKY---------- 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc---CCC----------
Confidence 122345788999999999888999999999999999999999999753211 11111110 000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+..++.++.+++.+|++.+|++||++.|+++
T Consensus 219 ----~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 219 ----PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ----CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0111244567889999999999999999999975
No 342
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.9e-33 Score=290.32 Aligned_cols=261 Identities=22% Similarity=0.231 Sum_probs=191.3
Q ss_pred ccccccCceEEEEEEECCCCEEEEEEeecc--chhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQ--LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
+.+|.|+++.||++.. +++.||||++... .....+.+.+|+++++.++|+||+++++++.+.+..+++|||+++|++
T Consensus 8 ~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 8 KCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSC 86 (314)
T ss_pred HhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCH
Confidence 3344555555555543 6999999998754 234456799999999999999999999999999999999999999999
Q ss_pred HHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC-----cc
Q 005278 499 EKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD-----SV 572 (704)
Q Consensus 499 ~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~-----~~ 572 (704)
.+++... ...+++.....++.|++.|++||| +.+|+||||||+||+++.++.+|++|||.+..+..... ..
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 9999854 345888999999999999999995 57899999999999999999999999999876532211 11
Q ss_pred eeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcc---------h
Q 005278 573 IQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLT---------E 641 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~---------~ 641 (704)
......++..|+|||++.. ..++.++|||||||++|||++|+.||............ .....+..+. .
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhhcCC
Confidence 1123357788999998865 35788999999999999999999999764322211111 1111000000 0
Q ss_pred -------hccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 642 -------VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 642 -------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
..++. ...............++.+++..||+.||++||+++|+++
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPN-NRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccc-hhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000 0011112223345567889999999999999999999976
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.6e-33 Score=294.48 Aligned_cols=267 Identities=22% Similarity=0.287 Sum_probs=197.2
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeee----CCeE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCN----IDFK 486 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 486 (704)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++++++||||+++.+++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 368899999999999999999854 699999999875432 234567789999999999999999988753 3467
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||+. |+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||++....
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 158 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQP-LTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMARGLS 158 (334)
T ss_pred EEEEehhh-hhHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccceeec
Confidence 99999995 689998875543 899999999999999999995 5789999999999999999999999999998764
Q ss_pred CCCCc--ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC---C-c
Q 005278 567 EGDDS--VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD---G-L 639 (704)
Q Consensus 567 ~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~-~ 639 (704)
..... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+.... ............ . +
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~ 236 (334)
T cd07855 159 SSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVL 236 (334)
T ss_pred ccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhh
Confidence 33221 11223468899999998755 46889999999999999999999999653211 011111100000 0 0
Q ss_pred chhccccch-------hhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 TEVVDANLV-------REE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 ~~~~~~~~~-------~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
......... ... .........+.++.+++.+|++.+|++||+++++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 000000000 000 000011234677899999999999999999999876
No 344
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=309.51 Aligned_cols=270 Identities=17% Similarity=0.181 Sum_probs=187.5
Q ss_pred HhCCCCccccccccCceEEEEEEECC--CCEEEEEE--------------eec---cchhhhHHHHHHHHHHHhcCCCCC
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKV--------------FNL---QLERASRSFDSECEILRSIRHRNL 473 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~--------------~~~---~~~~~~~~~~~e~~~l~~l~h~ni 473 (704)
..++|++.+.||+|+||+||++.... +..++.|. +.+ ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 22222221 111 112234568899999999999999
Q ss_pred ceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCC----CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC
Q 005278 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHN----YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD 549 (704)
Q Consensus 474 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~ 549 (704)
+++++++...+..++|+|++. +++.+++.... ..........++.|++.||+||| +.+|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999985 58888776432 22345567789999999999995 57899999999999999
Q ss_pred CCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCC-CCccccc-cccH
Q 005278 550 ENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKP-TNEIFIG-EMSL 627 (704)
Q Consensus 550 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p-~~~~~~~-~~~~ 627 (704)
.++.+||+|||+++.+...... ......||+.|+|||++.+..++.++|||||||++|||++|..+ +...... ...+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~ 380 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQL 380 (501)
T ss_pred CCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHH
Confidence 9999999999999876543221 12235699999999999999999999999999999999998754 4321111 1111
Q ss_pred HHHHHh------hcCCCc---chhccc-cchhh---hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 628 KHWVKE------SLPDGL---TEVVDA-NLVRE---EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 628 ~~~~~~------~~~~~~---~~~~~~-~~~~~---~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+.+.. ..+... ...++. .+... ..........+..+.+++.+|++.||++||++.|+++
T Consensus 381 ~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 381 LKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 111110 011100 000000 00000 0000011122345678899999999999999999976
No 345
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.7e-33 Score=289.24 Aligned_cols=247 Identities=27% Similarity=0.312 Sum_probs=195.3
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
+.|+..+.||+|+||.||+|+.. +++.+|+|.+.... ......+.+|+++++.++|+|++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34667789999999999999864 68889999886421 233456788999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
||+. |++.+++......+++..+..++.+++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9996 6888888766666899999999999999999995 578999999999999999999999999998865432
Q ss_pred cceeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 571 SVIQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
....+++.|+|||++. ...++.++|||||||++|||++|+.||...... .....+.....+
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~----------- 232 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESP----------- 232 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCC-----------
Confidence 2235788999999864 456788999999999999999999998652111 111111110000
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
......++..+.+++.+||+.+|++||++.++++.-
T Consensus 233 ------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 233 ------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred ------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 001123456688999999999999999999997654
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=3.6e-33 Score=291.09 Aligned_cols=271 Identities=22% Similarity=0.287 Sum_probs=195.5
Q ss_pred cccccc--CceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTG--SFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
..||+| +||+||+++. .+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356776 9999999986 479999999986543 22346788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc--
Q 005278 496 GSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-- 572 (704)
Q Consensus 496 gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~-- 572 (704)
|++.+++... ...+++..+..++.|++.||+|| |+.+|+||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~l---H~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYL---HQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 9999998754 33488899999999999999999 46789999999999999999999999998654332211110
Q ss_pred ---eeccccccccccCCcccCCC--CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh---------cCCC
Q 005278 573 ---IQTMTIATIGYMAPEYGSEG--IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES---------LPDG 638 (704)
Q Consensus 573 ---~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~---------~~~~ 638 (704)
......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ........ .+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchh
Confidence 01112356679999998763 478899999999999999999999976422111 11110000 0000
Q ss_pred cch---------------hccc----cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH--HHHHhHHH
Q 005278 639 LTE---------------VVDA----NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA--KLKKIKEK 695 (704)
Q Consensus 639 ~~~---------------~~~~----~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~--~L~~~~~~ 695 (704)
... .... ......-.......++..+.+++.+||+.||++|||+.|+++ .++.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 000 0000 000000011223356778999999999999999999999964 34555444
No 347
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.9e-33 Score=287.45 Aligned_cols=266 Identities=21% Similarity=0.284 Sum_probs=194.1
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
++|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57888999999999999999865 689999999865422 233568889999999999999999999999999999999
Q ss_pred ccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeeccceecCCCC
Q 005278 492 FMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 492 ~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfgla~~~~~~~ 569 (704)
|++ +++.+++... ....++.....++.|++.|++||| +.+++||||+|+||+++. ++.+||+|||++.......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~ 157 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 157 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence 996 5888887643 333678888899999999999995 578999999999999985 5679999999997653321
Q ss_pred CcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh-hcC-CC-cchhcc-
Q 005278 570 DSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-SLP-DG-LTEVVD- 644 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~- 644 (704)
. ......+++.|+|||++.+ ..++.++||||+||++|+|+||+.||......+. ..+.... ..+ .. +....+
T Consensus 158 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (294)
T PLN00009 158 R--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRILGTPNEETWPGVTSL 234 (294)
T ss_pred c--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhccccccc
Confidence 1 1223357889999998765 4578899999999999999999999965321111 1110000 000 00 000000
Q ss_pred ccchhh------hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 ANLVRE------EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 ~~~~~~------~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.+... ..........+.++.+++.+|++.+|++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 235 PDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000000 0000011223566889999999999999999999965
No 348
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.1e-33 Score=281.53 Aligned_cols=250 Identities=22% Similarity=0.227 Sum_probs=196.0
Q ss_pred CCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC--CeE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCNI--DFK 486 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 486 (704)
.+|...+.||+|+||.||+|+. .++..||+|.+.... ......+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4788899999999999999985 468999999875321 23345788999999999999999999998764 457
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++++||+++++|.+++..... +++.....++.|++.|++||| +.+++|+||+|+||+++.++.++|+|||+++...
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 157 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQ 157 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccccc
Confidence 899999999999999876543 788899999999999999994 6789999999999999999999999999998653
Q ss_pred CCCC-cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccc
Q 005278 567 EGDD-SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDA 645 (704)
Q Consensus 567 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (704)
.... ........++..|+|||++.+..++.++|+|||||++||+++|+.||...... ... .......
T Consensus 158 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~-~~~~~~~------- 225 (264)
T cd06653 158 TICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAM----AAI-FKIATQP------- 225 (264)
T ss_pred cccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHH----HHH-HHHHcCC-------
Confidence 2111 11112345889999999998888999999999999999999999999753111 111 1000000
Q ss_pred cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 646 NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.....+......+.+++.+|++ +|.+||++.+++.
T Consensus 226 ------~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 226 ------TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ------CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0011222445678899999999 5799999998764
No 349
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=8.4e-33 Score=283.10 Aligned_cols=263 Identities=22% Similarity=0.285 Sum_probs=195.4
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccch--hhhHHHHHHHHHHHhc---CCCCCceEEeeeeeCCe-----
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE--RASRSFDSECEILRSI---RHRNLIKIISNCCNIDF----- 485 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 485 (704)
|++.+.||+|+||.||+|+.. +++.+|+|+++.... .....+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999976 489999999875432 2234566788777766 59999999999988776
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 486 KALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
.+++|||+. ++|.+++.... ..+++..+..++.|+++|++||| +.+++|+||+|+||+++.++.++|+|||.+..
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~ 156 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLARI 156 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence 899999997 48999887543 35899999999999999999995 56899999999999999999999999999987
Q ss_pred cCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC-cchhc
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG-LTEVV 643 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 643 (704)
...... .....++..|+|||++.+..++.++|+|||||++|||++|..||...... ..+..+........ .....
T Consensus 157 ~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07838 157 YSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-DQLDKIFDVIGLPSEEEWPR 232 (287)
T ss_pred ccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-HHHHHHHHHcCCCChHhcCC
Confidence 643321 12234788999999999889999999999999999999999998753221 11222222111100 00000
Q ss_pred c-----ccchhhh--hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 D-----ANLVREE--QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 ~-----~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. ..+.... .......+....+.+++.+||+.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 233 NVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0 0000000 001111234567889999999999999999999964
No 350
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.8e-33 Score=282.11 Aligned_cols=243 Identities=23% Similarity=0.241 Sum_probs=186.9
Q ss_pred ccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHH-HhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 421 NLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEIL-RSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
+.||+|+||.||+|... +|+.||+|.+..... .....+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 46999999999999864 689999999865421 1222344454444 445899999999999999999999999999
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
++|.+++.... .+++..+..++.|++.||.|| |+.+++||||+|+||+++.++.++|+|||++..... ..
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~~ 151 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDL---HQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------NK 151 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCcEEEeecccceeccc------cc
Confidence 99999997653 478899999999999999999 457899999999999999999999999999876432 12
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
...+++.|+|||...+..++.++||||||+++|||++|..||...... ........... .. ...
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~--------~~---~~~ 215 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-----AVFDNILSRRI--------NW---PEE 215 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhccc--------CC---CCc
Confidence 345788999999988888899999999999999999999999653211 11111000000 00 001
Q ss_pred hhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHH
Q 005278 656 VKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 656 ~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
....++..+.+++.+||+.+|++||++.++.+.|
T Consensus 216 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 216 VKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred ccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 1113456788999999999999999887665543
No 351
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-34 Score=283.12 Aligned_cols=248 Identities=25% Similarity=0.321 Sum_probs=204.0
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
.+.|..-++||+||||.||-++.. +|+.+|.|.+.++. .........|..++++++.+.||.+--.|..++..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 467788889999999999999854 79999999886553 23344578899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 490 LEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
+..|.||+|.-++...+ ..+++..+.-++.+|+.||++| |+.+||.||+||+|||+|+.|+++|+|.|+|..+..+
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl---H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL---HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH---HhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 99999999999998653 4589999999999999999999 6688999999999999999999999999999998765
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.. ....+||.||||||++..+.|+...|-||+||++|||+.|+.||...... ++| +.+|+...
T Consensus 341 ~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK----vk~----------eEvdrr~~ 403 (591)
T KOG0986|consen 341 KP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK----VKR----------EEVDRRTL 403 (591)
T ss_pred Cc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh----hhH----------HHHHHHHh
Confidence 43 34458999999999999999999999999999999999999999763221 111 11222221
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
... ...+..++++..++....+..||++|..-+
T Consensus 404 ~~~--~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 404 EDP--EEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred cch--hhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 111 122345677788899999999999998543
No 352
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=6.3e-33 Score=287.10 Aligned_cols=244 Identities=27% Similarity=0.310 Sum_probs=192.9
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
|...+.||+|+||+||+|+.. +++.||+|.+.... ......+.+|+++++.++|||++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999854 68999999986432 22335688899999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+. |++.+++......+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~----- 173 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP----- 173 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----
Confidence 96 5888888766667899999999999999999995 57899999999999999999999999999864322
Q ss_pred eeccccccccccCCcccC---CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 573 IQTMTIATIGYMAPEYGS---EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
.....|+..|+|||++. ...++.++|||||||++|||++|..||..... ........ .......
T Consensus 174 -~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~--~~~~~~~~---~~~~~~~------- 240 (313)
T cd06633 174 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIA---QNDSPTL------- 240 (313)
T ss_pred -CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHH---hcCCCCC-------
Confidence 12346888999999874 46688899999999999999999999865321 11111111 0000000
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
....++..+.+++.+||+.+|.+||++.++++.
T Consensus 241 ------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 ------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011223457889999999999999999999864
No 353
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.3e-33 Score=282.14 Aligned_cols=241 Identities=22% Similarity=0.293 Sum_probs=184.9
Q ss_pred cccccCceEEEEEEE-CCCCEEEEEEeeccch---hhhHHHHHHHH---HHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 422 LLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE---RASRSFDSECE---ILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
.||+|+||.||+|.. .+++.||+|.+..... .....+..|.. .++...||+|+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 489999999999985 4689999999865421 11222334433 3444579999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|+|.+++...+ .+++..+..++.|++.|++||| +.+|+||||||+||+++.++.++|+|||++....... .
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~----~ 152 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK----P 152 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----C
Confidence 999999887554 4899999999999999999995 5789999999999999999999999999987653221 1
Q ss_pred ccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQA 653 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (704)
....|+..|+|||++.++ .++.++||||+||++|||++|+.||........ ......... . .
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~~------~---------~ 215 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT------M---------A 215 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhhc------c---------C
Confidence 234689999999998754 688999999999999999999999976322111 110000000 0 0
Q ss_pred hhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 654 FSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 654 ~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
...+..++..+.+++.+|++.+|++|| ++.|+++
T Consensus 216 ~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 216 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 011112356788899999999999999 8999874
No 354
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=2.5e-33 Score=293.34 Aligned_cols=271 Identities=23% Similarity=0.251 Sum_probs=199.4
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC-----Ce
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI-----DF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 485 (704)
.++|.+.+.||+|+||+||+|+. .+++.||||.+.... ......+.+|+.+++.++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 45789999999999999999985 468999999986532 22345677899999999999999999988654 34
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.++|+||+. ++|.+++.... .+++..+..++.|++.|++||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 158 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLARTT 158 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence 799999996 68999887553 4899999999999999999994 578999999999999999999999999999866
Q ss_pred CCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc---CCCcch
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL---PDGLTE 641 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~ 641 (704)
.... .......++..|+|||.+.. ..++.++|||||||++|+|++|+.||.+.... ........... ++....
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 159 SEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYV-HQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred CCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChH-HHHHHHHHHhCCCChHHhhh
Confidence 4322 11223457889999998754 46889999999999999999999999653210 00110000000 000000
Q ss_pred hccccchh---------hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHh
Q 005278 642 VVDANLVR---------EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK--LKKI 692 (704)
Q Consensus 642 ~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~--L~~~ 692 (704)
..+..... .........+++.++.+++.+|++.+|++||+++|+++. ++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence 00000000 000011122456778999999999999999999999876 5544
No 355
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=4.6e-33 Score=285.03 Aligned_cols=255 Identities=23% Similarity=0.277 Sum_probs=198.2
Q ss_pred CCCccccccccCceEEEEEEE----CCCCEEEEEEeeccc----hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 486 (704)
+|+..+.||+|++|.||+++. .+++.||||+++... ....+.+..|+++++++ +||||+++.+.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 467788999999999999974 357889999986432 22345688999999999 599999999999999999
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++||||+++|+|.+++.... .+++..+..++.|+++|++||| +.+++||||+|+||+++.++.++++|||+++...
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 156 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccccc
Confidence 99999999999999987643 4788899999999999999995 5789999999999999999999999999987654
Q ss_pred CCCCcceeccccccccccCCcccCCCC--CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEGI--ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
..... ......|+..|+|||...+.. .+.++||||||+++|||++|..||..... ......+.+.....
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~------- 227 (288)
T cd05583 157 AEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKS------- 227 (288)
T ss_pred ccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHcc-------
Confidence 33211 122345889999999887655 78899999999999999999999864211 11111211111100
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
....+..++..+.+++.+||+.+|++|||++++.+.|+.
T Consensus 228 --------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 --------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred --------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 001122344567889999999999999999988776654
No 356
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.9e-33 Score=288.67 Aligned_cols=249 Identities=25% Similarity=0.363 Sum_probs=203.0
Q ss_pred HHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
.....|.+...||+|.|+.|..|+. .++..||+|.+++..- .....+.+|+++|..++|||||+++.+...+...|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3456788899999999999999985 4799999999976542 223458899999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
||||+.+|.+.+++.++++-.. .....++.|+..|++|| |++.|||||||++||+++.+.++||+|||++..+..+
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e-~~ar~~F~q~vsaveYc---H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~ 208 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKE-KEARAKFRQIVSAVEYC---HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG 208 (596)
T ss_pred EEEeccCchhHHHHHhcccchh-hhhhhhhHHHHHHHHHH---hhcceeccccchhhcccccccceeeeccccceeeccc
Confidence 9999999999999998877444 88888999999999999 6789999999999999999999999999999988643
Q ss_pred CCcceeccccccccccCCcccCCCC-CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
......+|++.|.|||++.+.. .++++|+||+|+++|-++.|..||++..-.+. -..++...+
T Consensus 209 ---~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-------------r~rvl~gk~ 272 (596)
T KOG0586|consen 209 ---LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-------------RPRVLRGKY 272 (596)
T ss_pred ---ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-------------cchheeeee
Confidence 2345568999999999998865 56789999999999999999999987321110 011111111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
. .+.-...+.-+++++++-.+|.+|++++++.+
T Consensus 273 r-------Ip~~ms~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 273 R-------IPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred c-------ccceeechhHHHHHHhhccCccccCCHHHhhh
Confidence 1 11122344567899999999999999999843
No 357
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.5e-33 Score=291.02 Aligned_cols=272 Identities=23% Similarity=0.286 Sum_probs=203.1
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----eEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID-----FKA 487 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 487 (704)
+|.+.+.||+|++|.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++|+||+++.+++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999965 58999999987543 334567899999999999999999999988765 789
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||++ ++|.+++.... .+++..+..++.+++.|++|| |+.+|+||||||+||+++.++.++|+|||++.....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~L---H~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~ 155 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYL---HSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDP 155 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecc
Confidence 9999997 58988887554 689999999999999999999 557899999999999999999999999999987654
Q ss_pred CCC-cceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC--------
Q 005278 568 GDD-SVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD-------- 637 (704)
Q Consensus 568 ~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-------- 637 (704)
... ........++..|+|||++.+. .++.++|+||||+++|+|++|+.||.+....+. +.. +......
T Consensus 156 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~-~~~-i~~~~~~~~~~~~~~ 233 (330)
T cd07834 156 DEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQ-LNL-IVEVLGTPSEEDLKF 233 (330)
T ss_pred cccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHH-HHH-HHHhcCCCChhHhhh
Confidence 321 0112334578899999998877 789999999999999999999999976432110 000 0000000
Q ss_pred ----Ccchhccc-cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhHH
Q 005278 638 ----GLTEVVDA-NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK--LKKIKE 694 (704)
Q Consensus 638 ----~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~--L~~~~~ 694 (704)
.....+.. ...............+..+.+++..||+.+|++||++.++++. ++.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 234 ITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred ccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 00000000 0000000001112245678899999999999999999999874 554443
No 358
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.4e-33 Score=289.18 Aligned_cols=267 Identities=24% Similarity=0.291 Sum_probs=196.9
Q ss_pred HHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeee-CCe
Q 005278 410 IQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCN-IDF 485 (704)
Q Consensus 410 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 485 (704)
+..++++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+..|++++++++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456789999999999999999999854 79999999876432 2234668889999999999999999998865 557
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.++|+||+ +++|.+++... .+++.....++.|++.|++|| |+.+|+||||+|+||++++++.++|+|||.+...
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~--~~~~~~~~~~~~ql~~aL~~L---H~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~ 158 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSR--PLEKQFIQYFLYQILRGLKYV---HSAGVVHRDLKPSNILINENCDLKICDFGLARIQ 158 (328)
T ss_pred EEEEeehh-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCcccCCCCHHHEeECCCCCEEeCcccccccc
Confidence 88999998 56898888643 367888889999999999999 5678999999999999999999999999998754
Q ss_pred CCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh--cCCCc-ch
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES--LPDGL-TE 641 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~-~~ 641 (704)
... .....++..|+|||++.+ ..++.++||||||+++|+|+||+.||...... .....+.... .+..+ ..
T Consensus 159 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 159 DPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHV-NQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred CCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHh
Confidence 321 122357889999998765 56899999999999999999999998653210 0111111000 00000 00
Q ss_pred hcccc-------chhh--hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 642 VVDAN-------LVRE--EQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 642 ~~~~~-------~~~~--~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+.. .... .+.......++..+.+++.+|++.+|++||++.+++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000 00001111245678999999999999999999999654
No 359
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-32 Score=281.72 Aligned_cols=251 Identities=24% Similarity=0.271 Sum_probs=194.5
Q ss_pred CCCccccccccCceEEEEEEE----CCCCEEEEEEeeccc----hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeE
Q 005278 416 GFNECNLLGTGSFGSVYKGTL----FDGTNVAIKVFNLQL----ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFK 486 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 486 (704)
+|+..+.||+|+||.||+++. .+|+.||+|++.... ....+.+.+|+++++++ +|+||+++.+++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477788999999999999985 368999999987532 12346688899999999 599999999999998899
Q ss_pred EEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 487 ALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
++|+||+++++|.+++.... .+++.....++.|++.|+.|| |+.+++||||+|+||+++.++.+||+|||++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~l---H~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 156 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHL---HKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFH 156 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeEECCCCCEEEeeCccceecc
Confidence 99999999999999997654 478888899999999999999 56889999999999999999999999999998764
Q ss_pred CCCCcceeccccccccccCCcccCCC--CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcc
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEG--IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVD 644 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 644 (704)
..... ......|+..|+|||..... .++.++||||||+++|+|++|..||..... ......+........
T Consensus 157 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~------ 228 (290)
T cd05613 157 EDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSE------ 228 (290)
T ss_pred ccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccC------
Confidence 32211 12234588999999987653 467899999999999999999999864211 112222221111000
Q ss_pred ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCC-----CHHHHHH
Q 005278 645 ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRV-----SMKDAAA 687 (704)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rp-----t~~ev~~ 687 (704)
.+.+..+...+.+++.+|++.+|++|| ++.++..
T Consensus 229 ---------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ---------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 001123445678899999999999997 5666644
No 360
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=9.4e-33 Score=282.08 Aligned_cols=262 Identities=21% Similarity=0.245 Sum_probs=194.2
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccch-hhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEEecc
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE-RASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
|...+.||+|++|+||+|+.. +++.||+|.+..... .......+|+..+++++ |+|++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 566789999999999999975 588999999865432 22334567899999999 999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 494 PNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 494 ~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+|++.+++.... ..+++..+..++.|++.++.||| +.+++|+||+|+||++++++.++|+|||++........
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 889999887654 56899999999999999999995 57899999999999999999999999999987643221
Q ss_pred eeccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccc-----------cHHHHHHhhcCC-Cc
Q 005278 573 IQTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEM-----------SLKHWVKESLPD-GL 639 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~-----------~~~~~~~~~~~~-~~ 639 (704)
.....++..|+|||++. ...++.++|+||||+++|||++|+.||......+. .-..|....... ..
T Consensus 155 -~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd07830 155 -YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKL 233 (283)
T ss_pred -cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccc
Confidence 12345788999999774 45578999999999999999999999865321110 000111100000 00
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+...... . ........+..+.+++.+||+.+|++||+++|++.
T Consensus 234 ~~~~~~~~~~-~-~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 234 GFRFPQFAPT-S-LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccc-c-HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000000 0 00001112467889999999999999999999965
No 361
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-34 Score=267.05 Aligned_cols=249 Identities=22% Similarity=0.244 Sum_probs=199.3
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 488 (704)
..++|+.++++|+|.||.|-.++- .+++.+|+|++++.+. .+...-..|-++++..+||.+..+--.|+..+..++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 347888899999999999999985 4799999999987653 333456779999999999999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
||||..||.|.-++.+.+. +++....-+-..|..||.|| |+++||.||+|.+|.++|.+|++||+|||+++.--
T Consensus 246 VMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YL---Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I-- 319 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYL---HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI-- 319 (516)
T ss_pred EEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhh---hhCCeeeeechhhhheeccCCceEeeecccchhcc--
Confidence 9999999999988876543 66666666788899999999 56889999999999999999999999999998532
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.....+...+|||.|+|||++....|+..+|-|.+||+||||++|+.||.....+ .+ .+++-..
T Consensus 320 ~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kL------------FeLIl~e-- 383 (516)
T KOG0690|consen 320 KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KL------------FELILME-- 383 (516)
T ss_pred cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HH------------HHHHHhh--
Confidence 2233456679999999999999999999999999999999999999999763211 11 1111110
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC--HHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVS--MKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt--~~ev~~ 687 (704)
....+...+++...++...+..||.+|.. ..|+.+
T Consensus 384 ----d~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakE 420 (516)
T KOG0690|consen 384 ----DLKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKE 420 (516)
T ss_pred ----hccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHH
Confidence 11122244556777899999999999973 344433
No 362
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=9.5e-33 Score=289.43 Aligned_cols=267 Identities=20% Similarity=0.257 Sum_probs=194.1
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC------
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID------ 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 484 (704)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999985 468999999986532 223356789999999999999999999986542
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
..++|+||+.. ++.++.. ..+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.++|+|||+++.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~L---H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~ 166 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYI---HSAGIIHRDLKPGNLAVNEDCELKILDFGLARH 166 (342)
T ss_pred eEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHH---HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence 46899999964 7776653 3478899999999999999999 457899999999999999999999999999876
Q ss_pred cCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCC--Ccch
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPD--GLTE 641 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~ 641 (704)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.+..... .+.......... .+..
T Consensus 167 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (342)
T cd07879 167 ADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQ 240 (342)
T ss_pred CCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHH
Confidence 4321 123457889999998766 468899999999999999999999997532111 011100000000 0000
Q ss_pred hccc-c---c------hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH--HHHhH
Q 005278 642 VVDA-N---L------VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK--LKKIK 693 (704)
Q Consensus 642 ~~~~-~---~------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~--L~~~~ 693 (704)
.... . . .............+..+.+++..|++.||++||+++|+++. ++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 241 KLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence 0000 0 0 00000000011234568899999999999999999999854 55544
No 363
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.9e-33 Score=285.36 Aligned_cols=249 Identities=26% Similarity=0.388 Sum_probs=200.4
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 489 (704)
++|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|++++++++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888899999999999999864 79999999986532 233467888999999998 99999999999999999999
Q ss_pred EeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCC
Q 005278 490 LEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|||+++++|.+++.+.. .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~ 156 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNS 156 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCCcc
Confidence 99999999999998664 4899999999999999999995 5789999999999999999999999999998764332
Q ss_pred Cc------------------ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHH
Q 005278 570 DS------------------VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWV 631 (704)
Q Consensus 570 ~~------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~ 631 (704)
.. .......++..|+|||......++.++||||||++++++++|+.||...... ..+.. .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~-~ 234 (280)
T cd05581 157 SPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEY-LTFQK-I 234 (280)
T ss_pred ccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHH-H
Confidence 11 1222345789999999988888999999999999999999999999763210 00000 0
Q ss_pred HhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCH----HHHHH
Q 005278 632 KESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSM----KDAAA 687 (704)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~----~ev~~ 687 (704)
. . .....+...+..+.+++.+||+.+|++||++ .|+++
T Consensus 235 ~-----------~-------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 235 L-----------K-------LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred H-----------h-------cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 0 0 0001112235568899999999999999999 77653
No 364
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=263.73 Aligned_cols=252 Identities=23% Similarity=0.264 Sum_probs=196.6
Q ss_pred HhCCCCcc-ccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeee----CCe
Q 005278 413 ATNGFNEC-NLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCN----IDF 485 (704)
Q Consensus 413 ~~~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 485 (704)
.+++|.+. ++||-|-.|.|-.+.. .+++.+|+|++. +....++|++.--.. .|||||+++++|.. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~-----Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL-----DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh-----cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45666643 6899999999999875 479999999875 234456777754433 79999999999865 346
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeeecc
Q 005278 486 KALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGI 561 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~---~~~~~kl~Dfgl 561 (704)
..+|||.|+||.|.+.++.++ ..+.+..+..|+.||+.|+.|| |+..|.||||||+|+|.. .+..+|++|||+
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~l---H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYL---HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHH---HhcchhhccCChhheeeecCCCCcceEeccccc
Confidence 679999999999999998664 4589999999999999999999 668899999999999996 456799999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcch
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTE 641 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (704)
|+.-.. .......+-||.|.|||++...+|+..+|+||+||++|-|++|.+||.+.... .+..-.+..+..+..+
T Consensus 211 AK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~--aispgMk~rI~~gqy~ 285 (400)
T KOG0604|consen 211 AKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL--AISPGMKRRIRTGQYE 285 (400)
T ss_pred ccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCc--cCChhHHhHhhccCcc
Confidence 986432 23345567899999999999999999999999999999999999999875431 1111111111111101
Q ss_pred hccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 642 VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
...+++...+++..++|+.++..+|++|.|+.|+..
T Consensus 286 ----------FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 286 ----------FPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ----------CCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 122345567788899999999999999999999853
No 365
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-35 Score=268.31 Aligned_cols=251 Identities=25% Similarity=0.267 Sum_probs=190.5
Q ss_pred CccccccccCceEEEEEEEC-CCCEEEEEEeeccc-hhhhHHHHHHHHHHHh-cCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 418 NECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-ERASRSFDSECEILRS-IRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
+....||.|+||+|+|-..+ .|+..|||+++... +.+..++..|.+...+ -+.||||+++|.+...+..++.||.|.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd 146 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD 146 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh
Confidence 34568999999999999854 69999999998665 3556777777776554 479999999999988888899999995
Q ss_pred CCCHHHHHh----hCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 495 NGSLEKWLY----SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 495 ~gsL~~~l~----~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
.|+..+-. ..+..+++.-.-.|......||.||.+. ..||||||||+|||+|..|.+|+||||++-.+. .
T Consensus 147 -~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv---~ 220 (361)
T KOG1006|consen 147 -ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV---D 220 (361)
T ss_pred -hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHH---H
Confidence 46654332 2345588888888889999999999864 569999999999999999999999999987553 3
Q ss_pred cceeccccccccccCCcccCC--CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 571 SVIQTMTIATIGYMAPEYGSE--GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
+...+..+|...|||||.+.. ..|+-++||||+|++|||+.||+.||.....--.++.+.+....|. +...
T Consensus 221 SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~-----l~~~-- 293 (361)
T KOG1006|consen 221 SIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPI-----LLFD-- 293 (361)
T ss_pred HHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCe-----ecCc--
Confidence 445566689999999998754 3488899999999999999999999976322111111111111110 1100
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+++..+..++..|+.+|-+.||...++.+
T Consensus 294 ------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 294 ------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred ------ccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 111245677889999999999999999998864
No 366
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=4.5e-33 Score=291.87 Aligned_cols=266 Identities=20% Similarity=0.241 Sum_probs=193.3
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC---------
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNI--------- 483 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------- 483 (704)
..+|...+.||+|+||.||+|.. .+|+.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 36889999999999999999985 46899999998765555567788999999999999999999876543
Q ss_pred -----CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEe
Q 005278 484 -----DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVS 557 (704)
Q Consensus 484 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-~~~~~kl~ 557 (704)
...++|+||++ ++|.+++... .+++.....++.|++.|++||| +.+|+||||||+||+++ +++.+|++
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999997 5898888643 3789999999999999999995 57899999999999998 45678999
Q ss_pred eeccceecCCCCCc-ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc
Q 005278 558 DFGISKLLGEGDDS-VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 558 Dfgla~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
|||.++........ .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......+. ....... .
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~-~ 235 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILES-V 235 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHh-c
Confidence 99999866432111 11123357889999997644 5688899999999999999999999965322110 1111000 0
Q ss_pred CCC-------cchhccccch-----hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 636 PDG-------LTEVVDANLV-----REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 636 ~~~-------~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.. .......... ..............++.+++.+|++.||++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 236 PVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 0000000000 000000011134567889999999999999999999964
No 367
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.4e-32 Score=287.74 Aligned_cols=267 Identities=22% Similarity=0.250 Sum_probs=194.0
Q ss_pred CCCCc-cccccccCceEEEEEEEC-CCCEEEEEEeeccchhh--------------hHHHHHHHHHHHhcCCCCCceEEe
Q 005278 415 NGFNE-CNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERA--------------SRSFDSECEILRSIRHRNLIKIIS 478 (704)
Q Consensus 415 ~~~~~-~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~~ 478 (704)
++|.. .+.||+|+||+||+|... +++.||||.+....... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999854 68999999986432111 124778999999999999999999
Q ss_pred eeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 479 NCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 479 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
++...+..++||||++ |+|.+++.... .+++.....++.|++.|++|| |+.+|+||||+|+||+++.++.++++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~L---H~~~i~H~dl~~~nill~~~~~~kl~d 162 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVL---HKWYFMHRDLSPANIFINSKGICKIAD 162 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH---HhCCeecccccHHHeEECCCCCEEECC
Confidence 9999999999999996 69999887543 488999999999999999999 457899999999999999999999999
Q ss_pred eccceecCCCC------------CcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccc
Q 005278 559 FGISKLLGEGD------------DSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEM 625 (704)
Q Consensus 559 fgla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~ 625 (704)
||.+....... .........+++.|+|||.+.+. .++.++||||+||++|||++|+.||......+
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~- 241 (335)
T PTZ00024 163 FGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID- 241 (335)
T ss_pred ccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 99998764111 01111223468889999988764 46889999999999999999999997532211
Q ss_pred cHHHHHHhhc-C--CCcchhcc-ccc----hh-hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 626 SLKHWVKESL-P--DGLTEVVD-ANL----VR-EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 626 ~~~~~~~~~~-~--~~~~~~~~-~~~----~~-~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+........ + ..+..... +.. .. ..........++.++.+++..|++.+|++||++.|++.
T Consensus 242 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1111111000 0 00000000 000 00 00000111233567889999999999999999999975
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-32 Score=286.71 Aligned_cols=269 Identities=21% Similarity=0.248 Sum_probs=197.4
Q ss_pred HHHHHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC-
Q 005278 408 LDIQRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNI- 483 (704)
Q Consensus 408 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~- 483 (704)
.++...+++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 10 KTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred HHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 45677889999999999999999999985 578999999986532 22345678899999999999999999988643
Q ss_pred -----CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 484 -----DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 484 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
...+++++++ +++|.+++... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~d 163 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILD 163 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCEEEec
Confidence 3467888876 78998887654 3889999999999999999995 57899999999999999999999999
Q ss_pred eccceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc--
Q 005278 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-- 635 (704)
Q Consensus 559 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-- 635 (704)
||++...... .....++..|+|||+..+ ..++.++|||||||++|||++|+.||...... ..+........
T Consensus 164 fg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~ 237 (345)
T cd07877 164 FGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTP 237 (345)
T ss_pred cccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCC
Confidence 9998864321 223457889999998765 56888999999999999999999998642211 11111111000
Q ss_pred CCCcchhccccchhhh----------hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 636 PDGLTEVVDANLVREE----------QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+......+........ .........+..+.+++..|++.||++||++.+++..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 238 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000000000000000 0000001235568899999999999999999998653
No 369
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=8.2e-33 Score=286.67 Aligned_cols=267 Identities=22% Similarity=0.243 Sum_probs=194.8
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchh--hhHHHHHHHHHHHhcCCCCCceEEeeeeeCC------
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLER--ASRSFDSECEILRSIRHRNLIKIISNCCNID------ 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 484 (704)
.++|+..+.||+|+||.||+|+.. +++.+|+|++...... ....+.+|++++++++||||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 478999999999999999999865 6899999998654322 2345778999999999999999999875433
Q ss_pred --eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 485 --FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 485 --~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
..++|+||+.+ ++.+.+......+++..+..++.|+++|++|| |+.+|+||||||+||++++++.++|+|||++
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~l---H~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 162 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYL---HENHILHRDIKAANILIDNQGILKIADFGLA 162 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence 46899999965 78887776666799999999999999999999 5678999999999999999999999999999
Q ss_pred eecCCCCCcc---------eeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH
Q 005278 563 KLLGEGDDSV---------IQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 563 ~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 632 (704)
.......... ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||.+..... .......
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~ 241 (311)
T cd07866 163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFK 241 (311)
T ss_pred hhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 8654322111 1122356888999998765 458899999999999999999999986532211 1111111
Q ss_pred hhcC--C-C------cch----hccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 633 ESLP--D-G------LTE----VVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 633 ~~~~--~-~------~~~----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.... . . ... ......... ...........+.+++.+|++.+|++|||+.|++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 242 LCGTPTEETWPGWRSLPGCEGVHSFTNYPRT--LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HhCCCChhhchhhhhcccccccccCCCCCcc--HHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000 0 0 000 000000000 00011123356889999999999999999999864
No 370
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-32 Score=281.59 Aligned_cols=262 Identities=25% Similarity=0.278 Sum_probs=197.7
Q ss_pred CCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 417 FNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
|+..+.||+|++|.||+|+.. +++.+|+|++.... ......+..|+.++++++|+|++++.+++.+.+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456678999999999999965 59999999987653 233456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcce
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVI 573 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~ 573 (704)
+ ++|.+++......+++..+..++.+++.|++||| +.+|+||||+|+||++++++.++|+|||.+........ .
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~--~ 154 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR--T 154 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--c
Confidence 7 5999999876556899999999999999999995 56899999999999999999999999999987643221 1
Q ss_pred eccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC--CC--cchh-----c
Q 005278 574 QTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP--DG--LTEV-----V 643 (704)
Q Consensus 574 ~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~--~~--~~~~-----~ 643 (704)
.....++..|+|||.+.+. .++.++|||||||++||+++|+.||......+ .......... .. +... .
T Consensus 155 ~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd07829 155 YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID--QLFKIFQILGTPTEESWPGVTKLPDY 232 (282)
T ss_pred cCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH--HHHHHHHHhCCCcHHHHHhhcccccc
Confidence 2233467789999988766 78999999999999999999999986532110 0000000000 00 0000 0
Q ss_pred c---ccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 644 D---ANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 644 ~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+ +....... ..........+.+++..||+.+|++||++.|++.
T Consensus 233 ~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 233 KPTFPKFPPKDL-EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccCccch-HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0 00000000 0011122567899999999999999999999975
No 371
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.6e-32 Score=287.58 Aligned_cols=264 Identities=20% Similarity=0.261 Sum_probs=195.7
Q ss_pred HHHHhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC--
Q 005278 410 IQRATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID-- 484 (704)
Q Consensus 410 ~~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 484 (704)
+....++|+..+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 344567899999999999999999984 479999999985432 223456889999999999999999999886543
Q ss_pred ----eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeec
Q 005278 485 ----FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFG 560 (704)
Q Consensus 485 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfg 560 (704)
..++||||+ +++|.+++... .+++..+..++.|++.|++|| |+.+|+||||||+||+++.++.++++|||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~L---H~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYI---HAAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HhCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 458999999 67998888643 488999999999999999999 55789999999999999999999999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc--CC
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL--PD 637 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~ 637 (704)
++...... .....+++.|+|||.+.+ ..++.++|+||+|+++|++++|..||....... .+........ +.
T Consensus 164 ~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~ 237 (343)
T cd07880 164 LARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCH
Confidence 99865322 123357889999998765 458889999999999999999999997532110 0111100000 00
Q ss_pred Ccchhcccc-----------chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 638 GLTEVVDAN-----------LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 638 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
.+...+... .... ........++..+.+++.+|++.||++||++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKK-DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcc-hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 000000000 0000 00011123456688999999999999999999997
No 372
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=307.92 Aligned_cols=258 Identities=21% Similarity=0.296 Sum_probs=203.5
Q ss_pred HHHHHHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeC
Q 005278 408 LDIQRATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNI 483 (704)
Q Consensus 408 ~~~~~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 483 (704)
.+++-..++|+++++||+|+||.|..+++. +++.+|+|++.+-. ..+..-|..|-.+|..-+.+-|+.+.-.|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 344555689999999999999999999964 68999999987521 33456799999999999999999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
.+.|+|||||+||+|...+.+.. .+++..+.-++..|..||.-| |+.|+|||||||+|||+|..|++||+|||.+-
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldsl---H~mgyVHRDiKPDNvLld~~GHikLADFGsCl 223 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSL---HSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL 223 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHH---HhccceeccCCcceeEecccCcEeeccchhHH
Confidence 99999999999999999999877 688888887888888888888 67899999999999999999999999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccC----C-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGS----E-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG 638 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 638 (704)
.+...+ .......+|||.|++||++. + +.|++.+|-||+||++|||+.|..||..-.- ..++.+
T Consensus 224 km~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl-veTY~K--------- 292 (1317)
T KOG0612|consen 224 KMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL-VETYGK--------- 292 (1317)
T ss_pred hcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH-HHHHHH---------
Confidence 776432 34455678999999999863 3 6799999999999999999999999975210 011111
Q ss_pred cchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC---HHHHHH
Q 005278 639 LTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS---MKDAAA 687 (704)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt---~~ev~~ 687 (704)
+++..- ...++...+.+....++|...+. +|+.|.. +.|+..
T Consensus 293 ---Im~hk~---~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 293 ---IMNHKE---SLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ---Hhchhh---hcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 111100 00111223456667778877664 7888887 777643
No 373
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.4e-33 Score=264.61 Aligned_cols=202 Identities=25% Similarity=0.321 Sum_probs=168.2
Q ss_pred hCCCCccccccccCceEEEEEEEC---C--CCEEEEEEeeccch--hhhHHHHHHHHHHHhcCCCCCceEEeeeee-CCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF---D--GTNVAIKVFNLQLE--RASRSFDSECEILRSIRHRNLIKIISNCCN-IDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~---~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 485 (704)
...|+.+..||+|.||.||+|.-. + ...+|+|+++.... ...-..-+|+..++.++|||++.++.++.. ...
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357889999999999999999532 2 23789999875532 233457789999999999999999999877 778
Q ss_pred EEEEEeccCCCCHHHHHhhC----CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC----CcEEEe
Q 005278 486 KALVLEFMPNGSLEKWLYSH----NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN----MTAHVS 557 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~----~~~kl~ 557 (704)
+++++||.+. +|.+.++.+ ...++...+..|+.||..|+.||| +.=|+|||+||.||++..+ |.|||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEee
Confidence 8999999988 999988733 356899999999999999999995 4559999999999999876 899999
Q ss_pred eeccceecCCCCCcc-eeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 558 DFGISKLLGEGDDSV-IQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 558 Dfgla~~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
|||+|+.+...-... ....++.|..|.|||.+.+. .||++.|||+.||++.||+|-.+-|.+
T Consensus 179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred cccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 999999886543332 33456789999999988765 599999999999999999998876654
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=2.6e-32 Score=285.07 Aligned_cols=265 Identities=22% Similarity=0.256 Sum_probs=189.7
Q ss_pred CCCccccccccCceEEEEEEEC-C--CCEEEEEEeeccch--hhhHHHHHHHHHHHhc-CCCCCceEEeeeee----CCe
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-D--GTNVAIKVFNLQLE--RASRSFDSECEILRSI-RHRNLIKIISNCCN----IDF 485 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~--~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 485 (704)
+|+..+.||+|+||.||+++.. + +..||+|++..... .....+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4777889999999999999854 4 78899999864322 2245678899999999 59999999987543 245
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.++++||+. ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~ 155 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLARGF 155 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCceec
Confidence 788899886 68999886543 4889999999999999999994 578999999999999999999999999999876
Q ss_pred CCCCCc--ceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhc-C-CC-c
Q 005278 566 GEGDDS--VIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESL-P-DG-L 639 (704)
Q Consensus 566 ~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~-~-~~-~ 639 (704)
...... .......|++.|+|||+..+ ..++.++|+||+||++|++++|+.||...... ..+.......- + .. +
T Consensus 156 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 234 (332)
T cd07857 156 SENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYV-DQLNQILQVLGTPDEETL 234 (332)
T ss_pred ccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 432211 11223468999999998765 46889999999999999999999998652210 00000000000 0 00 0
Q ss_pred chhccccc---------hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 640 TEVVDANL---------VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 640 ~~~~~~~~---------~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
....++.. ................+.+++.+|++.+|++||++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 00000000 000000001112346788999999999999999999985
No 375
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.6e-32 Score=276.60 Aligned_cols=247 Identities=22% Similarity=0.254 Sum_probs=192.6
Q ss_pred CCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALV 489 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 489 (704)
+|...+.||+|+||.||+++.. .+..+++|+++... ......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4777889999999999999854 34556666654311 12334577899999999999999999999999999999
Q ss_pred EeccCCCCHHHHHhh---CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC
Q 005278 490 LEFMPNGSLEKWLYS---HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 490 ~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
+||+++++|.+++.. ....+++..++.++.|++.|+.|| |+.+++|+||+|+||+++. +.++++|||++....
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l---H~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYM---HQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHH---HHcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 999999999998864 345689999999999999999999 4578999999999999975 569999999998764
Q ss_pred CCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 567 EGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 567 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
.... ......|++.|+|||...+..++.++|+||||+++|++++|..||.... ............
T Consensus 157 ~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~-------- 221 (260)
T cd08222 157 GSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIVEGP-------- 221 (260)
T ss_pred CCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHcCC--------
Confidence 3222 1223457889999999888888999999999999999999999986421 111111111000
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
....+..++.++.+++.+||+.+|++||++.|+++
T Consensus 222 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 222 ------TPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ------CCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 00112244567889999999999999999999975
No 376
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.9e-32 Score=307.34 Aligned_cols=145 Identities=25% Similarity=0.415 Sum_probs=129.8
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
++|.+.++||+|+||.||+|... +++.||||+++... ......+..|+.+++.++||||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999965 68999999987542 223467889999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccce
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISK 563 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~ 563 (704)
||+++++|.+++...+ .+++..+..++.||+.||+||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997654 3788889999999999999995 4689999999999999999999999999986
No 377
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.98 E-value=1.6e-32 Score=287.88 Aligned_cols=264 Identities=21% Similarity=0.261 Sum_probs=195.6
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe---
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF--- 485 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 485 (704)
...++|+..+.||+|++|.||+|+.. +++.||+|++.... ......+.+|+.++++++|||++++.+++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 35678999999999999999999865 68899999986432 2234567789999999999999999988766554
Q ss_pred ---EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 486 ---KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 486 ---~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
.++|+||+ +++|.+++... .+++..+..++.|++.|++|| |+.+|+||||+|+||+++.++.++|+|||++
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~L---H~~gi~H~dlkp~Nill~~~~~~kL~dfg~~ 165 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYI---HSAGIIHRDLKPSNIAVNEDCELKILDFGLA 165 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH---HHCCeecCCCCHHHeEECCCCCEEEcccccc
Confidence 89999998 56999988753 489999999999999999999 5578999999999999999999999999999
Q ss_pred eecCCCCCcceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh--------
Q 005278 563 KLLGEGDDSVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE-------- 633 (704)
Q Consensus 563 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~-------- 633 (704)
...... .....++..|+|||...+ ..++.++|||||||++||+++|+.||...... ..+......
T Consensus 166 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~~~~~~~~~~ 239 (343)
T cd07851 166 RHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMNLVGTPDEEL 239 (343)
T ss_pred cccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHhcCCCCHHH
Confidence 865432 123357889999998755 36788999999999999999999999653211 011111100
Q ss_pred ---hcCCCcchhcccc-chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 634 ---SLPDGLTEVVDAN-LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 634 ---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
............. ..............+.++.+++.+|++.+|++|||+.||++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 240 LQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 0000000000000 00000000111123567899999999999999999999965
No 378
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=5.8e-33 Score=271.67 Aligned_cols=257 Identities=26% Similarity=0.397 Sum_probs=197.6
Q ss_pred hCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc--hh-----hhHHHHHHHHHHHhcCCCCCceEEeeeee-CC
Q 005278 414 TNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ER-----ASRSFDSECEILRSIRHRNLIKIISNCCN-ID 484 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~-----~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 484 (704)
.++|-.++++|+|||+.||+|. +...+.||||+-.... .. ..+...+|.++-+.+.||.||++++++.- .+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3577788999999999999998 4568899999865432 11 12346789999999999999999999954 56
Q ss_pred eEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeeecc
Q 005278 485 FKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGI 561 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~---~~~~~kl~Dfgl 561 (704)
..+-|.|||+|.+|+-|++.++. +++..+..|+.||+.||.||.+ -+.+|||-|+||.|||+- .-|.+||+|||+
T Consensus 542 sFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNE-ikpPIIHYDLKPgNILLv~GtacGeIKITDFGL 619 (775)
T KOG1151|consen 542 SFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNE-IKPPIIHYDLKPGNILLVNGTACGEIKITDFGL 619 (775)
T ss_pred cceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhc-cCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence 78899999999999999987754 8899999999999999999987 678999999999999994 567899999999
Q ss_pred ceecCCCCCcc-----eeccccccccccCCcccC----CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH
Q 005278 562 SKLLGEGDDSV-----IQTMTIATIGYMAPEYGS----EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 562 a~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 632 (704)
++++.+..+.. .++..+||.+|++||.+. ..+.+.|+||||.||++|+++.|+.||+..... .+...
T Consensus 620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ----QdILq 695 (775)
T KOG1151|consen 620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ----QDILQ 695 (775)
T ss_pred hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH----HHHHh
Confidence 99997654432 334558999999999643 346888999999999999999999999763211 11111
Q ss_pred hhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 633 ESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
. ..++... .-.++..+..+.+...+|++|+++--++|....++.
T Consensus 696 e------NTIlkAt----EVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 696 E------NTILKAT----EVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred h------hchhcce----eccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 0 0111111 111222334456677899999999888888776663
No 379
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=4.9e-32 Score=271.36 Aligned_cols=236 Identities=28% Similarity=0.302 Sum_probs=191.8
Q ss_pred ccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCH
Q 005278 423 LGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 423 ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
||+|+||.||++... +++.+|+|.+..... .....+..|+.++++++||||+++++.+...+..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999865 589999999875532 2445788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccc
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTI 578 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 578 (704)
.+++.... .+++.....++.|+++|+.||| +.+++|+||+|+||+++.++.++|+|||.+....... .......
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTNTFC 154 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCC--CcccCCc
Confidence 99998654 4899999999999999999995 5889999999999999999999999999998764332 1223446
Q ss_pred ccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 579 ATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 579 gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
++..|+|||...+...+.++|+||||+++||+++|..||..... .......... ....+.
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~---------------~~~~~~ 214 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKD---------------PLRFPE 214 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcC---------------CCCCCC
Confidence 78899999999888899999999999999999999999965321 1111111100 011112
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVSMKD 684 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt~~e 684 (704)
..+..+.+++.+|+..||++||++++
T Consensus 215 ~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 215 FLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 22466789999999999999999954
No 380
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=6.7e-33 Score=276.62 Aligned_cols=242 Identities=23% Similarity=0.356 Sum_probs=195.5
Q ss_pred cccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 420 CNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
.+.+|+|.||+||-|+. ++|+.||||++.+-. .....++++|+.+++++.||.||.+...|+.++.+++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G- 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG- 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-
Confidence 37899999999999985 579999999997654 34557899999999999999999999999999999999999955
Q ss_pred CHHHHH-hhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEEeeeccceecCCCCCcc
Q 005278 497 SLEKWL-YSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM---TAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 497 sL~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~---~~kl~Dfgla~~~~~~~~~~ 572 (704)
+..+.+ ...+..+++....-++.||+.||.||| -++|+|+|+||+|||+.+.. .+||||||+|+++++...
T Consensus 648 DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksF-- 722 (888)
T KOG4236|consen 648 DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSF-- 722 (888)
T ss_pred hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecchhhh--
Confidence 555554 566667888888889999999999995 58899999999999997443 699999999999876432
Q ss_pred eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhh
Q 005278 573 IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQ 652 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (704)
....+|||.|+|||++..+.|...-|+||.||++|--++|..||.+. .++.+-+ -+..+..
T Consensus 723 -RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQI-----------QNAaFMy--- 783 (888)
T KOG4236|consen 723 -RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQI-----------QNAAFMY--- 783 (888)
T ss_pred -hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHh-----------hcccccc---
Confidence 34568999999999999999999999999999999999999999762 1111111 1111111
Q ss_pred hhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 653 AFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 653 ~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
....+.+.+...+++|...++..=.+|-+..+.+
T Consensus 784 Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 784 PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1223445667788999999999888898876654
No 381
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=4.9e-32 Score=234.51 Aligned_cols=198 Identities=25% Similarity=0.359 Sum_probs=170.4
Q ss_pred CCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+|...++||+|.||+||+|+ ..+++-||+|..+... +.......+|+-+++.++|+|||++++.........+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 56677899999999999998 4568899999987654 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
|.. +|..+...-...++......++.|+.+|+.++ |+..+.|||+||.|.+++.+|+.|++|||+++-.+-.. .
T Consensus 83 cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fc---hshnvlhrdlkpqnllin~ngelkladfglarafgipv--r 156 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFC---HSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV--R 156 (292)
T ss_pred hhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhh---hhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce--E
Confidence 965 89998887777799999999999999999999 56679999999999999999999999999999765322 2
Q ss_pred eeccccccccccCCcccCCCC-CCcccceeeHHHHHHHHhhCCCC-CCc
Q 005278 573 IQTMTIATIGYMAPEYGSEGI-ISPKSDVYSYGILLMETFTRKKP-TNE 619 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~Gv~l~el~tg~~p-~~~ 619 (704)
-.+..+.|..|.+|.++.+.+ |+...|+||.||++.|+.....| |.+
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 234557899999999987754 88999999999999999985544 544
No 382
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1e-31 Score=266.42 Aligned_cols=222 Identities=19% Similarity=0.137 Sum_probs=176.7
Q ss_pred cCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhh
Q 005278 426 GSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS 504 (704)
Q Consensus 426 G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 504 (704)
|.+|.||+++. .+++.+|+|.+.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++.+
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 88999999985 478999999986542 234455566666899999999999999999999999999999999876
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccccccccc
Q 005278 505 HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584 (704)
Q Consensus 505 ~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~ 584 (704)
.. .+++.....++.|++.|++||| +.+|+||||||+||+++.++.++++|||.+....... ....++..|+
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y~ 149 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMYC 149 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCcccc
Confidence 54 3899999999999999999994 5789999999999999999999999999887654321 2234577899
Q ss_pred CCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHH
Q 005278 585 APEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSI 664 (704)
Q Consensus 585 aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 664 (704)
|||...+..++.++||||+|+++|||++|..|+...... ...... ...+..++..+
T Consensus 150 aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---------------~~~~~~---------~~~~~~~~~~~ 205 (237)
T cd05576 150 APEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---------------INTHTT---------LNIPEWVSEEA 205 (237)
T ss_pred CCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---------------cccccc---------cCCcccCCHHH
Confidence 999998888999999999999999999999886532110 000000 00111234567
Q ss_pred HHHHhhhcCCCCCCCCCHHHH
Q 005278 665 MHLALDCCMESPEQRVSMKDA 685 (704)
Q Consensus 665 ~~l~~~cl~~~P~~Rpt~~ev 685 (704)
.+++.+|++.||++||++.+.
T Consensus 206 ~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 206 RSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHccCCHHHhcCCCcc
Confidence 889999999999999997443
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-32 Score=262.70 Aligned_cols=265 Identities=22% Similarity=0.257 Sum_probs=198.7
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcC--CC----CCceEEeeeeeCCe
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIR--HR----NLIKIISNCCNIDF 485 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~--h~----niv~l~~~~~~~~~ 485 (704)
.+++|.+...+|+|.||.|-++... .+..||||+++ .+....+...-|+++++++. .| -+|.+.+||.-.++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik-~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK-NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHH-HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3789999999999999999998743 47899999985 33455667788999999993 22 37788888999999
Q ss_pred EEEEEeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC--------------
Q 005278 486 KALVLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-------------- 550 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-------------- 550 (704)
.++|+|.+ |-|+.+++.+++ ..++...+..++.|+++++++| |+.+++|-|+||+||++.+
T Consensus 166 iCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fL---h~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFL---HDLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHH---HhcceeecCCChheEEEeccceEEEeccCCccc
Confidence 99999988 569999999754 5689999999999999999999 6688999999999999832
Q ss_pred ------CCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCcccccc
Q 005278 551 ------NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGE 624 (704)
Q Consensus 551 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~ 624 (704)
+..+|++|||.|+.-... .+..+.|..|.|||++.+-.++.++||||+||||+|+.||..-|+...+.+
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~-----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEH-----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred eeccCCCcceEEEecCCcceeccC-----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 335899999999875433 245578999999999999999999999999999999999999887643221
Q ss_pred -ccHHHHHHhhcCCC-----------------cchhcccc--------chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCC
Q 005278 625 -MSLKHWVKESLPDG-----------------LTEVVDAN--------LVREEQAFSVKIDCLLSIMHLALDCCMESPEQ 678 (704)
Q Consensus 625 -~~~~~~~~~~~~~~-----------------~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~ 678 (704)
..+.+-+-.-.|.. +.+...++ .................+.+++..++..||++
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~ 396 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPAR 396 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccc
Confidence 01111111111111 00000000 00000001111233566999999999999999
Q ss_pred CCCHHHHHH
Q 005278 679 RVSMKDAAA 687 (704)
Q Consensus 679 Rpt~~ev~~ 687 (704)
|+|++|+++
T Consensus 397 RiTl~EAL~ 405 (415)
T KOG0671|consen 397 RITLREALS 405 (415)
T ss_pred cccHHHHhc
Confidence 999999964
No 384
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.4e-32 Score=280.22 Aligned_cols=240 Identities=23% Similarity=0.233 Sum_probs=192.6
Q ss_pred HhCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.++.|+....+|.|+|+.|-.+.. .+++..+||++... .....+|+.++... +||||+++.+.+.+..+.++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 356777778899999999999874 46899999998755 33445677666665 7999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee-CCCCcEEEeeeccceecCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL-DENMTAHVSDFGISKLLGEGD 569 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~-~~~~~~kl~Dfgla~~~~~~~ 569 (704)
|.+.+|-+.+.+..... +. ..+..|+.+++.|+.|| |++||||||+||+|||+ +..++++|+|||.++...+.
T Consensus 396 e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~L---H~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYL---HEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHH---HhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999988888875543 22 66778999999999999 55889999999999999 69999999999999876443
Q ss_pred CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 570 DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 570 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
....+-|..|.|||+.....+++++|+||||++||+|++|+.||.....+ ... ...+..
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei-~~~i~~------------ 528 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEI-HTRIQM------------ 528 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHH-HHhhcC------------
Confidence 22335688999999999999999999999999999999999999874433 111 111100
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.......+....+++.+|++.||.+||+|.++..
T Consensus 529 ----~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 529 ----PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ----CccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 0011345667889999999999999999999853
No 385
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2.2e-33 Score=255.78 Aligned_cols=269 Identities=20% Similarity=0.284 Sum_probs=198.1
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeee--------
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCN-------- 482 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 482 (704)
...|+...+||+|.||.||+|+. ++|+.||+|+.-... +.......+|+++++.++|+|++.+++.|..
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~ 95 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRD 95 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccc
Confidence 34667778999999999999985 468889998653321 2334567889999999999999999988843
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 483 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
....|+||++|++ +|...+......++..++.+++.++..||.|+ |...|+|||+||.|+||+.++.+||+|||++
T Consensus 96 r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~i---Hr~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 96 RATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYI---HRNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred cceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHH---HHhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 2357899999987 99999987777799999999999999999999 5678999999999999999999999999999
Q ss_pred eecCCCCC--cceeccccccccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh----c
Q 005278 563 KLLGEGDD--SVIQTMTIATIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES----L 635 (704)
Q Consensus 563 ~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----~ 635 (704)
+.+..... ....+.++.|..|.+||.+.+ ..++++.|||..||++.||+||.+-+++..+ ....+.+... -
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnte--qqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTE--QQQLHLISQLCGSIT 249 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChH--HHHHHHHHHHhccCC
Confidence 76643322 223455677999999997765 5699999999999999999999988876322 1122222211 1
Q ss_pred CCCcchhccccchhhh-------hhhhhhHHH------HHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 636 PDGLTEVVDANLVREE-------QAFSVKIDC------LLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~-------~~~~~~~~~------~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
++.|.++..-.+...- .......+. .+...+++..++..||.+|+++++++..
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 1112211111100000 000000111 1356789999999999999999998654
No 386
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=8.8e-32 Score=238.48 Aligned_cols=213 Identities=27% Similarity=0.312 Sum_probs=173.6
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc-hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL-ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.++......||+|++|.|-+-++ ++|+..|+|.++... .+..++...|+.+..+. .+|.+|+++|...+.....+.|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34455567899999999988874 689999999997655 34556677788776554 7999999999999989999999
Q ss_pred eccCCCCHHHHHh---hCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLY---SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
|.|. .||..+-. ..+..+++...-+|+..+.+||.|||+ +..++|||+||+|||++.+|++|+||||.+-.+.+
T Consensus 125 E~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d 201 (282)
T KOG0984|consen 125 ELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD 201 (282)
T ss_pred HHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence 9995 47766554 456678999999999999999999985 56799999999999999999999999999987743
Q ss_pred CCCcceeccccccccccCCcccCC----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHH
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSE----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVK 632 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~ 632 (704)
+...+...|...|||||.+.. ..|+-|+||||+|+++.||.+++.||+........+.+.+.
T Consensus 202 ---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe 267 (282)
T KOG0984|consen 202 ---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE 267 (282)
T ss_pred ---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence 344555678899999997653 46889999999999999999999999875554444444443
No 387
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8e-32 Score=261.60 Aligned_cols=243 Identities=21% Similarity=0.256 Sum_probs=196.0
Q ss_pred HhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 487 (704)
...+|.-+.+||+|+||.|-+|..+ +.+.+|||++++.+. .+.+--..|-+++... +-|.++++..+|..-+..|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3457888899999999999999855 577899999987652 2233445677777766 5789999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
+||||+.||+|--.++.-+. +.+..+.-++..||-||-+| |+++|+.||+|.+||++|.+|++||+|||+++.---
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFL---h~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFL---HSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred eEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhh---hcCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 99999999999888876544 66777788999999999999 789999999999999999999999999999975321
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccc
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANL 647 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (704)
....+...+|||.|+|||++...+|+..+|-|||||++|||+.|+.||++..+ ..+-+ .+.+.
T Consensus 503 --~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE--~elF~-----------aI~eh-- 565 (683)
T KOG0696|consen 503 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE--DELFQ-----------AIMEH-- 565 (683)
T ss_pred --CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHH-----------HHHHc--
Confidence 12234557899999999999999999999999999999999999999987322 11111 11111
Q ss_pred hhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC
Q 005278 648 VREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS 681 (704)
Q Consensus 648 ~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 681 (704)
....+...+.+.+.+....+.+.|.+|..
T Consensus 566 -----nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 -----NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -----cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 22334456778888999999999999974
No 388
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.7e-31 Score=277.44 Aligned_cols=258 Identities=23% Similarity=0.289 Sum_probs=207.3
Q ss_pred hHHHHHHhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeee--
Q 005278 407 YLDIQRATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCN-- 482 (704)
Q Consensus 407 ~~~~~~~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-- 482 (704)
+..+...++-|++.+.||+|.+|.||+++ .++|+.+|+|+.... ....++++.|.++++.. .|||++.++|++..
T Consensus 11 ~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~-~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 11 LSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT-EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC-ccccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 33344566788999999999999999998 567999999998655 33456788899999988 69999999999854
Q ss_pred ---CCeEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEee
Q 005278 483 ---IDFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSD 558 (704)
Q Consensus 483 ---~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~D 558 (704)
++...||||||.+||..+.++.- +..+.|..+.-|++.++.|+.+| |...++|||||-.|||++.++.||++|
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HL---H~nkviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHL---HNNKVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHH---hhcceeeecccCceEEEeccCcEEEee
Confidence 56889999999999999999832 56689999999999999999999 556699999999999999999999999
Q ss_pred eccceecCCCCCcceeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHh
Q 005278 559 FGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKE 633 (704)
Q Consensus 559 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~ 633 (704)
||.+..+...- .......|||.|||||++.- ..|+..+|+||+|++..||.-|.+|+.++.+...
T Consensus 167 FGvSaQldsT~--grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-------- 236 (953)
T KOG0587|consen 167 FGVSAQLDSTV--GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-------- 236 (953)
T ss_pred eeeeeeeeccc--ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh--------
Confidence 99998764322 22344579999999998753 3477899999999999999999999877543211
Q ss_pred hcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 634 SLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.++. .....+....+.....++.++|..|+.+|.++||++.++++
T Consensus 237 LF~I---------pRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 237 LFLI---------PRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hccC---------CCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0000 00111223345566788999999999999999999998865
No 389
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=1.7e-30 Score=258.70 Aligned_cols=238 Identities=30% Similarity=0.364 Sum_probs=191.9
Q ss_pred CceEEEEEEEC-CCCEEEEEEeeccchhh-hHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhh
Q 005278 427 SFGSVYKGTLF-DGTNVAIKVFNLQLERA-SRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYS 504 (704)
Q Consensus 427 ~~g~V~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 504 (704)
+||.||+|... +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999987654433 67899999999999999999999999999999999999999999999876
Q ss_pred CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceecccccccccc
Q 005278 505 HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYM 584 (704)
Q Consensus 505 ~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~ 584 (704)
... +++..++.++.+++.++.||| +.+++|+||+|+||+++.++.++++|||.+....... ......++..|+
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~~ 153 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEYM 153 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCCC
Confidence 544 789999999999999999995 4689999999999999999999999999998775432 223446888999
Q ss_pred CCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHH
Q 005278 585 APEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSI 664 (704)
Q Consensus 585 aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 664 (704)
|||......++.++||||||++++++++|..||...... .....+....... .......++.++
T Consensus 154 ~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~~~~ 217 (244)
T smart00220 154 APEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL-LELFKKIGKPKPP---------------FPPPEWKISPEA 217 (244)
T ss_pred CHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccCCC---------------CccccccCCHHH
Confidence 999998888899999999999999999999998652111 1111111100000 000000145678
Q ss_pred HHHHhhhcCCCCCCCCCHHHHHH
Q 005278 665 MHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 665 ~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.+++.+|+..+|++||++.++++
T Consensus 218 ~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 218 KDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHccCCchhccCHHHHhh
Confidence 89999999999999999999976
No 390
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.5e-30 Score=285.82 Aligned_cols=259 Identities=24% Similarity=0.250 Sum_probs=168.6
Q ss_pred HhCCCCccccccccCceEEEEEEEC-C----CCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEee------ee
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTLF-D----GTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISN------CC 481 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~ 481 (704)
..++|+..+.||+|+||.||+|+.. + +..||||++...... +....| .++...+.++..++.. ..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999864 4 789999987543211 111111 1112222222222211 23
Q ss_pred eCCeEEEEEeccCCCCHHHHHhhCCCcc-------------------CHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCC
Q 005278 482 NIDFKALVLEFMPNGSLEKWLYSHNYFL-------------------GILERLNIMIDVGLALEYLHHGHSTPMVHCDLK 542 (704)
Q Consensus 482 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk 542 (704)
.....++|+||+++++|.+++....... ....+..++.|++.||+||| +.+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeCcCC
Confidence 4567899999999999999987543211 12335579999999999995 5789999999
Q ss_pred CCCeeeCC-CCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCC----------------------CCCcccc
Q 005278 543 PNNILLDE-NMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG----------------------IISPKSD 599 (704)
Q Consensus 543 ~~Nil~~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~~~~~D 599 (704)
|+|||++. ++.+||+|||+|+.+...... ......+++.|+|||.+... .++.++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999985 579999999999866433222 22345689999999954221 2345679
Q ss_pred eeeHHHHHHHHhhCCCCCCccc--------cccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhh
Q 005278 600 VYSYGILLMETFTRKKPTNEIF--------IGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDC 671 (704)
Q Consensus 600 v~s~Gv~l~el~tg~~p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 671 (704)
||||||++|||+++..|++... ..+.....|.....+.. .+.... .............+++.+|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~---~~~~~d~~~~~~~dLi~~m 433 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRA-----SPDLRR---GFEVLDLDGGAGWELLKSM 433 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhcccc-----chhhhh---hhhhccccchHHHHHHHHH
Confidence 9999999999999877754311 11122333322111110 000000 0000001123456899999
Q ss_pred cCCCCCCCCCHHHHHH
Q 005278 672 CMESPEQRVSMKDAAA 687 (704)
Q Consensus 672 l~~~P~~Rpt~~ev~~ 687 (704)
++.||++|||++|+++
T Consensus 434 L~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 434 MRFKGRQRISAKAALA 449 (566)
T ss_pred ccCCcccCCCHHHHhC
Confidence 9999999999999976
No 391
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.7e-30 Score=276.12 Aligned_cols=257 Identities=21% Similarity=0.232 Sum_probs=180.2
Q ss_pred HhCCCCccccccccCceEEEEEEE-----------------CCCCEEEEEEeeccchhh--------------hHHHHHH
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGTL-----------------FDGTNVAIKVFNLQLERA--------------SRSFDSE 461 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~~-----------------~~~~~vavK~~~~~~~~~--------------~~~~~~e 461 (704)
..++|++.++||+|+||+||+|.. .+++.||||++....... .+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467999999999999999999963 235789999986443221 1234457
Q ss_pred HHHHHhcCCCCC-----ceEEeeeee--------CCeEEEEEeccCCCCHHHHHhhCC----------------------
Q 005278 462 CEILRSIRHRNL-----IKIISNCCN--------IDFKALVLEFMPNGSLEKWLYSHN---------------------- 506 (704)
Q Consensus 462 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~---------------------- 506 (704)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 778888876654 677777643 346799999999999999987421
Q ss_pred -CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccC
Q 005278 507 -YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMA 585 (704)
Q Consensus 507 -~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~a 585 (704)
..+++..+..++.|++.+++||| +.+|+||||||+||+++.++.+||+|||++..+..... .......+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 12456778899999999999995 56899999999999999999999999999976543221 11122345889999
Q ss_pred CcccCCCCC----------------------CcccceeeHHHHHHHHhhCCC-CCCccccc-------cccHHHHHHhhc
Q 005278 586 PEYGSEGII----------------------SPKSDVYSYGILLMETFTRKK-PTNEIFIG-------EMSLKHWVKESL 635 (704)
Q Consensus 586 PE~~~~~~~----------------------~~~~Dv~s~Gv~l~el~tg~~-p~~~~~~~-------~~~~~~~~~~~~ 635 (704)
||.+..... ..+.||||+||++|||++|.. |+.....- ......|.....
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 997653221 124799999999999999875 66542111 112222211100
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCC---CCCCCHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESP---EQRVSMKDAAA 687 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P---~~Rpt~~ev~~ 687 (704)
. ...............+++.+++..+| .+|+|++|+++
T Consensus 459 ~--------------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 Q--------------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred c--------------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0 00111112234567889999999766 68999999964
No 392
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=269.48 Aligned_cols=242 Identities=22% Similarity=0.305 Sum_probs=198.4
Q ss_pred CCCCccccccccCceEEEEEEECC-CCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
.+++.+..+|-||||.|-+.+.+. ...+|+|++++.. ....+.+..|-.+|...+.|.||+++-.|.+...+|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 455666789999999999988654 3348888887553 345567888999999999999999999999999999999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD 570 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~ 570 (704)
|-|-||.+...++..+. ++..+..-++..+.+|++|| |+++||.||+||+|.++|.+|-+||.|||+|+.++.+..
T Consensus 500 EaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYL---H~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~K 575 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYL---HRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRK 575 (732)
T ss_pred HhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHH---HhcCceeccCChhheeeccCCceEEeehhhHHHhccCCc
Confidence 99999999999987655 77777777899999999999 668899999999999999999999999999998876543
Q ss_pred cceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhh
Q 005278 571 SVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVRE 650 (704)
Q Consensus 571 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (704)
+...+|||.|.|||++..+..+.++|.||+|+++||+++|.+||.+..... .+ ..+..++.
T Consensus 576 ---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmk----tY--n~ILkGid---------- 636 (732)
T KOG0614|consen 576 ---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMK----TY--NLILKGID---------- 636 (732)
T ss_pred ---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHH----HH--HHHHhhhh----------
Confidence 456789999999999999999999999999999999999999998743211 11 11111111
Q ss_pred hhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC
Q 005278 651 EQAFSVKIDCLLSIMHLALDCCMESPEQRVS 681 (704)
Q Consensus 651 ~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 681 (704)
....|....+...+++++.+..+|.+|..
T Consensus 637 --~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 637 --KIEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred --hhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 12233445667788999999999999986
No 393
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=5.1e-31 Score=278.26 Aligned_cols=242 Identities=27% Similarity=0.378 Sum_probs=187.3
Q ss_pred ccccccccCce-EEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 419 ECNLLGTGSFG-SVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 419 ~~~~ig~G~~g-~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
..+++|.|+.| .||+|.. +|+.||||++-. ....-..+|+..++.- .|||||++++.-.+....|+..|.|..
T Consensus 513 ~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~~- 587 (903)
T KOG1027|consen 513 PKEILGYGSNGTVVFRGVY-EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCAC- 587 (903)
T ss_pred cHHHcccCCCCcEEEEEee-CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhhh-
Confidence 34678899888 5899986 589999998753 3345678999999998 699999999999999999999999966
Q ss_pred CHHHHHhhCC--Cc-cCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC---C--CcEEEeeeccceecCCC
Q 005278 497 SLEKWLYSHN--YF-LGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE---N--MTAHVSDFGISKLLGEG 568 (704)
Q Consensus 497 sL~~~l~~~~--~~-~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~---~--~~~kl~Dfgla~~~~~~ 568 (704)
+|+++++... .. ......+.++.|++.|+++| |+.+|||||+||.||||+. + ..++|+|||+++.+..+
T Consensus 588 sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHL---Hsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~ 664 (903)
T KOG1027|consen 588 SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHL---HSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGG 664 (903)
T ss_pred hHHHHHhccccchhhcccccHHHHHHHHHHHHHHH---HhcccccccCCCceEEEEccCCCcceeEEecccccccccCCC
Confidence 9999998641 11 12245678999999999999 5578999999999999975 3 47999999999998665
Q ss_pred CCcc-eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhC-CCCCCccccccccHHHHHHhhcCCCcchhcccc
Q 005278 569 DDSV-IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTR-KKPTNEIFIGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 569 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
.... ......||.||+|||.+....-+.++||||+||++|+.++| .+||++....+..... +.... ..
T Consensus 665 ~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~--------~~~~L--~~ 734 (903)
T KOG1027|consen 665 KSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT--------GNYTL--VH 734 (903)
T ss_pred cchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc--------Cccce--ee
Confidence 4432 24456899999999999998888899999999999999995 8999874332221111 00000 00
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+ ....++ ...++|.+|++++|..||+|.+|+.
T Consensus 735 L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 L-------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred e-------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 0 011122 6778999999999999999999974
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.4e-30 Score=265.34 Aligned_cols=215 Identities=23% Similarity=0.361 Sum_probs=176.0
Q ss_pred hHHHHHHh---CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcCCCCCceEEee
Q 005278 407 YLDIQRAT---NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQL---ERASRSFDSECEILRSIRHRNLIKIISN 479 (704)
Q Consensus 407 ~~~~~~~~---~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~ 479 (704)
|..++++. .-|-.++.||-|+||+|.+++ .++...+|.|.+++.. .......+.|-++|..-..+-||+++-.
T Consensus 618 YiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS 697 (1034)
T KOG0608|consen 618 YIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS 697 (1034)
T ss_pred HHHHHHhhccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE
Confidence 44444443 456777899999999999997 4457789999987653 3345667889999999999999999999
Q ss_pred eeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 480 CCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 480 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
|.+.+..|+||||++||++-.+|-+-+- +++....-++..+..|+++. |++|+|||||||+|||||.+|++||+||
T Consensus 698 FQDkdnLYFVMdYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesV---HkmGFIHRDiKPDNILIDrdGHIKLTDF 773 (1034)
T KOG0608|consen 698 FQDKDNLYFVMDYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESV---HKMGFIHRDIKPDNILIDRDGHIKLTDF 773 (1034)
T ss_pred eccCCceEEEEeccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHH---HhccceecccCccceEEccCCceeeeec
Confidence 9999999999999999999999886654 56666666777899999999 7799999999999999999999999999
Q ss_pred ccceecC---------CCCC-------------------------------cceeccccccccccCCcccCCCCCCcccc
Q 005278 560 GISKLLG---------EGDD-------------------------------SVIQTMTIATIGYMAPEYGSEGIISPKSD 599 (704)
Q Consensus 560 gla~~~~---------~~~~-------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~D 599 (704)
|++.-+. .++. .......+||+-|+|||++....++.-+|
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cd 853 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCD 853 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccch
Confidence 9986431 1100 00012236999999999999999999999
Q ss_pred eeeHHHHHHHHhhCCCCCCccccccc
Q 005278 600 VYSYGILLMETFTRKKPTNEIFIGEM 625 (704)
Q Consensus 600 v~s~Gv~l~el~tg~~p~~~~~~~~~ 625 (704)
-||.|||||||+.|+.||.....++.
T Consensus 854 wws~gvil~em~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 854 WWSVGVILYEMLVGQPPFLADTPGET 879 (1034)
T ss_pred hhHhhHHHHHHhhCCCCccCCCCCcc
Confidence 99999999999999999987555543
No 395
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=8.2e-32 Score=274.03 Aligned_cols=296 Identities=29% Similarity=0.408 Sum_probs=173.5
Q ss_pred CCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccc-cCchhhcCCCCCCEEecccccCCCcccchhhcccccCCC
Q 005278 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSG-LIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTN 83 (704)
Q Consensus 5 l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~ 83 (704)
+.+|++|.+++|++. .+...+..++.|+.+.+..|+++. -+|..+-+|..|+.||||+|++...+. .+.+
T Consensus 54 lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP~--------~LE~ 124 (1255)
T KOG0444|consen 54 LQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVPT--------NLEY 124 (1255)
T ss_pred HhhhhhhhhhhhhhH-hhhhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhhhcch--------hhhh
Confidence 456777777777777 455667777777777777777762 245556667777777777777766443 3666
Q ss_pred CCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCee
Q 005278 84 CRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGL 163 (704)
Q Consensus 84 l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 163 (704)
-+++..|+||+|+|..+....|.++. .|-.|+|++|++. .+|..+..+.+|++|+|++|.+....-..+..|++|+.|
T Consensus 125 AKn~iVLNLS~N~IetIPn~lfinLt-DLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vL 202 (1255)
T KOG0444|consen 125 AKNSIVLNLSYNNIETIPNSLFINLT-DLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVL 202 (1255)
T ss_pred hcCcEEEEcccCccccCCchHHHhhH-hHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhh
Confidence 77777777777777744444444443 5777777777776 566667777777777777776654333444445555555
Q ss_pred eccCcccC-CCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCccc
Q 005278 164 YLHGNKLQ-GSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSL 242 (704)
Q Consensus 164 ~L~~n~l~-~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 242 (704)
++++.+-+ .-+|.++..+.||..+|+|.|.+. .+|+.+-++++|+.|+|++|+|+ .+....+...+|+.|++|.|++
T Consensus 203 hms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQL 280 (1255)
T KOG0444|consen 203 HMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQL 280 (1255)
T ss_pred hcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchh
Confidence 55554433 234555555555555555555555 55555555555555555555555 2333344444555555555555
Q ss_pred CCCCCcccccCcCCcEEEeecCccCC-CCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCC
Q 005278 243 NGSLPSNIQNLKVLTNLDLSRNQLSG-DIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLS 315 (704)
Q Consensus 243 ~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 315 (704)
+ .+|++++++++|+.|++.+|+++- -+|..++.+.+|+.+..++|.+. .+|+.+..+..|+.|.|+.|++.
T Consensus 281 t-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi 352 (1255)
T KOG0444|consen 281 T-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI 352 (1255)
T ss_pred c-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee
Confidence 5 455555555555555555555432 24444555555555555555544 45555555555555555555543
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-30 Score=244.60 Aligned_cols=248 Identities=19% Similarity=0.253 Sum_probs=198.6
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccc---hhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL---ERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 488 (704)
.++|....+||+|+|+.|..+++ ++.+-+|+|++++.. .++....+.|..+..+- +||.+|.+..+|......++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46889999999999999999985 468889999987654 23345567787777766 79999999999999999999
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
|.||+++|+|--++++++. ++++.+.-+...|..||.|| |++||+.||+|.+||++|..|++|++|+|+++.--..
T Consensus 329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~fl---h~rgiiyrdlkldnvlldaeghikltdygmcke~l~~ 404 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFL---HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP 404 (593)
T ss_pred EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHH---hhcCeeeeeccccceEEccCCceeecccchhhcCCCC
Confidence 9999999999888876654 78888888888999999999 6799999999999999999999999999999754222
Q ss_pred CCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccc--cccccHHHHHHhhcCCCcchhcccc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIF--IGEMSLKHWVKESLPDGLTEVVDAN 646 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (704)
...++..+|||.|+|||++.+..|+..+|-|++||+|+||+.|+.||+-.. +.++.-.++.-+.+.+. .
T Consensus 405 --gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek-------q 475 (593)
T KOG0695|consen 405 --GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK-------Q 475 (593)
T ss_pred --CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh-------c
Confidence 223566799999999999999999999999999999999999999998543 33444444433222111 1
Q ss_pred chhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCC
Q 005278 647 LVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVS 681 (704)
Q Consensus 647 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt 681 (704)
...+...+.+...++..-+.+||++|..
T Consensus 476 -------iriprslsvkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 476 -------IRIPRSLSVKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred -------ccccceeehhhHHHHHHhhcCCcHHhcC
Confidence 1122233445667888899999999864
No 397
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.96 E-value=3.5e-32 Score=276.70 Aligned_cols=302 Identities=28% Similarity=0.410 Sum_probs=264.5
Q ss_pred CCCCCCEEecCCCcCc-ccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCC
Q 005278 4 MLPNLKYLTLFDNKLS-GTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLT 82 (704)
Q Consensus 4 ~l~~l~~L~l~~~~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~ 82 (704)
.||.|+.+++..|++. .-+|..+-.+..|+.|||++|+++ ..|..+..-+++-+|+||+|+|.+++... |.
T Consensus 76 ~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~l-------fi 147 (1255)
T KOG0444|consen 76 DLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSL-------FI 147 (1255)
T ss_pred cchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchH-------HH
Confidence 4788999999999876 347888999999999999999999 67888999999999999999999998776 88
Q ss_pred CCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCc-cccChhhcCCCCcC
Q 005278 83 NCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLN-GTIPTAVGRLRRLQ 161 (704)
Q Consensus 83 ~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~ 161 (704)
++.-|-+||||+|++. .+|+.+..+. +|++|.|++|.+.-.--..+..+++|++|.+++.+=+ ..+|.++..+.+|.
T Consensus 148 nLtDLLfLDLS~NrLe-~LPPQ~RRL~-~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~ 225 (1255)
T KOG0444|consen 148 NLTDLLFLDLSNNRLE-MLPPQIRRLS-MLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLR 225 (1255)
T ss_pred hhHhHhhhccccchhh-hcCHHHHHHh-hhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhh
Confidence 9999999999999998 6777777775 7999999999987655556677788889999987643 36788999999999
Q ss_pred eeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcc
Q 005278 162 GLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANS 241 (704)
Q Consensus 162 ~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~ 241 (704)
.+|||.|.+. ..|+.+.++++|+.|+||+|+|+ .+........+|+.|+++.|+++ .+|+.+..+++|+.|.+.+|+
T Consensus 226 dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~Nk 302 (1255)
T KOG0444|consen 226 DVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNK 302 (1255)
T ss_pred hccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCc
Confidence 9999999998 88999999999999999999998 44445666778999999999998 899999999999999999999
Q ss_pred cC-CCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCCCCCCC
Q 005278 242 LN-GSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPK 320 (704)
Q Consensus 242 l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 320 (704)
++ .-+|+.++++.+|+.+..++|.+. ..|+.++.+..|+.|.|+.|++- .+|+.+.-++.|+.||+..|+---..|.
T Consensus 303 L~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 303 LTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred ccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 87 568999999999999999999998 89999999999999999999998 8999999999999999999986544444
No 398
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.1e-30 Score=231.30 Aligned_cols=262 Identities=19% Similarity=0.310 Sum_probs=194.5
Q ss_pred HhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCC--eEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-HRNLIKIISNCCNID--FKAL 488 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~~~l 488 (704)
..++|++.+++|+|.+++||.|. ..+.+.++||+++. ...+.+.+|+.+++.++ ||||+++++...++. ...+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP---VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP---VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech---HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 45789999999999999999998 56788999999864 34577899999999996 999999999997754 5679
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeeccceecCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLLGE 567 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfgla~~~~~ 567 (704)
|+||+.+.+....-.. ++...+.-.+.+++.||.|+ |++||+|||+||.|+++|. .-..+++|+|+|.++.+
T Consensus 113 iFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyC---HS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp 185 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYC---HSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP 185 (338)
T ss_pred HhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHH---HhcCcccccCCcceeeechhhceeeeeecchHhhcCC
Confidence 9999999777664432 55667788899999999999 7899999999999999995 55799999999999877
Q ss_pred CCCcceeccccccccccCCcccC-CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh------------
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGS-EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES------------ 634 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~------------ 634 (704)
+... ..++.+..|--||.+- ...++..-|+|||||++..|+..+.||-.-.....+++..++-.
T Consensus 186 ~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY 262 (338)
T KOG0668|consen 186 GKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKY 262 (338)
T ss_pred Ccee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHH
Confidence 6543 3345667788999764 45688899999999999999999999743222122222222211
Q ss_pred ---cCCCcchhccccchhhhhhh--hhhH-HHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 635 ---LPDGLTEVVDANLVREEQAF--SVKI-DCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 635 ---~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+...+..++..........+ .... -..++.++++.+.+.+|-.+|||++|...
T Consensus 263 ~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 263 QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 11112222221111111111 0111 12367889999999999999999999854
No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=1.9e-27 Score=231.22 Aligned_cols=210 Identities=35% Similarity=0.504 Sum_probs=182.3
Q ss_pred ccccCceEEEEEEECC-CCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHH
Q 005278 423 LGTGSFGSVYKGTLFD-GTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEK 500 (704)
Q Consensus 423 ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 500 (704)
||+|++|.||++...+ ++.+++|++...... ..+.+.+|++.++.++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999998755322 34679999999999999999999999999899999999999999999
Q ss_pred HHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-CCcEEEeeeccceecCCCCCcceeccccc
Q 005278 501 WLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-NMTAHVSDFGISKLLGEGDDSVIQTMTIA 579 (704)
Q Consensus 501 ~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~g 579 (704)
++......+++..+..++.+++.++++|| +.+++|+||+|.||+++. ++.++++|||.+........ ......+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~ 155 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIVG 155 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhcccC
Confidence 99866445899999999999999999995 569999999999999999 89999999999987644321 1233457
Q ss_pred cccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhH
Q 005278 580 TIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKI 658 (704)
Q Consensus 580 t~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (704)
...|++||..... ..+.++|+|++|++++++
T Consensus 156 ~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------ 187 (215)
T cd00180 156 TPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------ 187 (215)
T ss_pred CCCccChhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------
Confidence 8899999998877 888999999999999998
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 659 DCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 659 ~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 246679999999999999999999764
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=249.99 Aligned_cols=197 Identities=23% Similarity=0.319 Sum_probs=168.0
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccch---hhh-----HHHHHHHHHHHhcC---CCCCceEEeeeee
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLE---RAS-----RSFDSECEILRSIR---HRNLIKIISNCCN 482 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~---~~~-----~~~~~e~~~l~~l~---h~niv~l~~~~~~ 482 (704)
.+|...+.+|+|+||.|+.|.++ +...|+||.+.+..- .+. ...-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46889999999999999999865 467789998876531 111 13567999999997 9999999999999
Q ss_pred CCeEEEEEeccC-CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecc
Q 005278 483 IDFKALVLEFMP-NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 483 ~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgl 561 (704)
.+.+|++||-.. +-+|.+++..+.. +++.....|++||+.|+++| |+.+|||||||-+||.++.+|-+||+|||.
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hl---h~~~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHL---HDQGIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhccccc---cccCceecccccccEEEecCCeEEEeeccc
Confidence 999999999864 4488999876543 89999999999999999999 789999999999999999999999999999
Q ss_pred ceecCCCCCcceeccccccccccCCcccCCCCCC-cccceeeHHHHHHHHhhCCCCCCc
Q 005278 562 SKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS-PKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 562 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
|.....+. ....+||.+|.|||++.+.+|- ...|||++|+++|.++....||..
T Consensus 717 aa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 717 AAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred hhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 98765443 4456899999999999987754 468999999999999998888753
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.3e-29 Score=232.12 Aligned_cols=266 Identities=23% Similarity=0.287 Sum_probs=189.9
Q ss_pred CCccccccccCceEEEEEEE-CCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC-----eEEE
Q 005278 417 FNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID-----FKAL 488 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~l 488 (704)
.+..+.||-|+||.||..+. .+|+.||.|++..-. -...+.+-+|+.++..++|.|++..++...... +.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34457899999999999985 479999999875322 234567888999999999999999988775543 4567
Q ss_pred EEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCC
Q 005278 489 VLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~ 568 (704)
++|.|. .+|+..+-.. ..++...+.-++.||.+||+|| |+.+|.||||||.|.+++++-..||||||+|+.....
T Consensus 135 ~TELmQ-SDLHKIIVSP-Q~Ls~DHvKVFlYQILRGLKYL---HsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d 209 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSP-QALTPDHVKVFVYQILRGLKYL---HTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR 209 (449)
T ss_pred HHHHHH-hhhhheeccC-CCCCcchhhhhHHHHHhhhHHH---hhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence 888884 4777766544 3477788888999999999999 6789999999999999999999999999999976433
Q ss_pred CCcceeccccccccccCCcccCCC-CCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcC-----------
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSEG-IISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLP----------- 636 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~----------- 636 (704)
....++..+.|..|.|||++++. .|+.+.||||.||++.|++.++.-|+.... ....+.+.+..-
T Consensus 210 -~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~P--iqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 210 -DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGP--IEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred -hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccCh--HHHHHHHHHHhCCCcHHHHHHHh
Confidence 33445556789999999998875 599999999999999999999888765221 111111111110
Q ss_pred CC-cchhccccchhhh----hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 637 DG-LTEVVDANLVREE----QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 637 ~~-~~~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
++ ...++........ .....+.+.-.+...+...++..||++|.+..+.++.+.
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 00 0111111000000 000111122234567888999999999999998876543
No 402
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.94 E-value=1.6e-26 Score=227.33 Aligned_cols=199 Identities=29% Similarity=0.406 Sum_probs=172.2
Q ss_pred CCccccccccCceEEEEEEECC-CCEEEEEEeeccchh-hhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccC
Q 005278 417 FNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLER-ASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
|...+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4566889999999999999764 899999999765444 56788999999999999999999999999899999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+++|.+++......+++.....++.+++.++.+|| +.+++|+|++|+||+++.++.++|+|||.+......... ..
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~~ 156 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-LL 156 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-cc
Confidence 99999999865543789999999999999999995 468999999999999999999999999999877543211 12
Q ss_pred ccccccccccCCccc-CCCCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 575 TMTIATIGYMAPEYG-SEGIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
....++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 157 ~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 157 KTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred cceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 334578889999988 667788899999999999999999999965
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=5.5e-27 Score=230.72 Aligned_cols=270 Identities=24% Similarity=0.330 Sum_probs=199.4
Q ss_pred HHHHHhCCCCccccccccCceEEEEEEEC----CCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeC
Q 005278 409 DIQRATNGFNECNLLGTGSFGSVYKGTLF----DGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNI 483 (704)
Q Consensus 409 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 483 (704)
++....+.|..+++||+|.|++||+|... ..+.||+|.+... .....+..|++++..+ .+.||+++.+++...
T Consensus 30 ~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnn 107 (418)
T KOG1167|consen 30 DIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNN 107 (418)
T ss_pred hhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccC
Confidence 34556678899999999999999999843 4688999988643 4456789999999999 599999999999999
Q ss_pred CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-CCCcEEEeeeccc
Q 005278 484 DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-ENMTAHVSDFGIS 562 (704)
Q Consensus 484 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-~~~~~kl~Dfgla 562 (704)
+.+.+|+||+++....++... ++...+..+++.+..||+++ |..|||||||||+|++.+ ..+.-.|.|||+|
T Consensus 108 d~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~---h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 108 DQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHL---HKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred CeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhh---hccCccccCCCccccccccccCCceEEechhH
Confidence 999999999999888887754 56778889999999999999 779999999999999998 4567899999999
Q ss_pred eecCCC------------------------------------------CCcceeccccccccccCCcccCC-CCCCcccc
Q 005278 563 KLLGEG------------------------------------------DDSVIQTMTIATIGYMAPEYGSE-GIISPKSD 599 (704)
Q Consensus 563 ~~~~~~------------------------------------------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 599 (704)
...... .........+||+||.|||++.. ...++++|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 722100 00011223479999999998754 56888999
Q ss_pred eeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh----------cCCC--cch---------------hcc-ccchh-h
Q 005278 600 VYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES----------LPDG--LTE---------------VVD-ANLVR-E 650 (704)
Q Consensus 600 v~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~----------~~~~--~~~---------------~~~-~~~~~-~ 650 (704)
|||.||+++-+++++.||-....+-..+.+.+.-. .+.. +.+ .++ ..+.. .
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 99999999999999999865444443333332100 0111 000 000 00000 0
Q ss_pred hh--hhhhhHH-HHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 651 EQ--AFSVKID-CLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 651 ~~--~~~~~~~-~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.. ......+ .+..+++++.+|+..||.+|-|++|+++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00 0011112 2347899999999999999999999965
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=9.9e-27 Score=231.62 Aligned_cols=130 Identities=24% Similarity=0.345 Sum_probs=111.0
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcC-----C---CCCceEEeeeee---
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIR-----H---RNLIKIISNCCN--- 482 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~--- 482 (704)
.+|-+.++||=|.|++||++. .++.+.||+|+.+.. ....+....||+++++++ | ..||++++.|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 678899999999999999997 567899999998654 444567788999999994 2 479999999954
Q ss_pred -CCeEEEEEeccCCCCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeee
Q 005278 483 -IDFKALVLEFMPNGSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILL 548 (704)
Q Consensus 483 -~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~ 548 (704)
+.++++|+|++ |.+|..++... -+.++...+.+|++||+.||.|||.. -+|||-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcceeee
Confidence 55899999999 55899988854 34589999999999999999999964 589999999999998
No 405
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=7.9e-28 Score=240.47 Aligned_cols=265 Identities=22% Similarity=0.238 Sum_probs=198.3
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcC------CCCCceEEeeeeeCCeE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIR------HRNLIKIISNCCNIDFK 486 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~~~~ 486 (704)
-.+|.+....|+|-|++|.+|..+ .|..||||++.... ...+.=..|+++|++|+ --|+++++..|....+.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHL 509 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKNHL 509 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhccee
Confidence 468888899999999999999854 48899999997653 22344467999999995 34899999999999999
Q ss_pred EEEEeccCCCCHHHHHhhC--CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeeccce
Q 005278 487 ALVLEFMPNGSLEKWLYSH--NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGISK 563 (704)
Q Consensus 487 ~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla~ 563 (704)
|||||.+. -+|.+.|++. ...+....+..++.|+..||..| -.-+|+|.||||.|||+++. ..+||||||.|.
T Consensus 510 ClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklL---K~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLL---KKCGVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHH---HhcCeeecccCccceEeccCcceeeeccCcccc
Confidence 99999884 4999999854 34578889999999999999999 45689999999999999965 568999999998
Q ss_pred ecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHH---------------
Q 005278 564 LLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLK--------------- 628 (704)
Q Consensus 564 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~--------------- 628 (704)
..+.... +....+..|.|||++.+..|+...|+||.||+|||+.||+.-|.+..+..+.-.
T Consensus 586 ~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK 661 (752)
T KOG0670|consen 586 FASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK 661 (752)
T ss_pred ccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence 8765442 223456689999999999999999999999999999999998876433221000
Q ss_pred -HHHHhhcCCC---cchh---------------ccc------cchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 629 -HWVKESLPDG---LTEV---------------VDA------NLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 629 -~~~~~~~~~~---~~~~---------------~~~------~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
++..+.+... +... +.| .+................+.+++..|+..||++|.|..
T Consensus 662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n 741 (752)
T KOG0670|consen 662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN 741 (752)
T ss_pred cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence 0001111000 0000 001 01111112233345567788999999999999999999
Q ss_pred HHHH
Q 005278 684 DAAA 687 (704)
Q Consensus 684 ev~~ 687 (704)
++++
T Consensus 742 qAL~ 745 (752)
T KOG0670|consen 742 QALK 745 (752)
T ss_pred HHhc
Confidence 9864
No 406
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.5e-27 Score=224.40 Aligned_cols=258 Identities=21% Similarity=0.235 Sum_probs=191.7
Q ss_pred CCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCC------e
Q 005278 415 NGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNID------F 485 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------~ 485 (704)
.+|.....+|.|.- .|..|... .++.||+|+..... ....++..+|...+..++|+||++++.++.... .
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46667788898888 56666532 58999999875442 334567889999999999999999999986543 5
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceec
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLL 565 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~ 565 (704)
.|+|||+|. ++|.+.+... ++-.+...+..|+..|++|| |+.+|+||||||+||++..+..+||.|||+|+.-
T Consensus 96 ~y~v~e~m~-~nl~~vi~~e---lDH~tis~i~yq~~~~ik~l---hs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e 168 (369)
T KOG0665|consen 96 VYLVMELMD-ANLCQVILME---LDHETISYILYQMLCGIKHL---HSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE 168 (369)
T ss_pred HHHHHHhhh-hHHHHHHHHh---cchHHHHHHHHHHHHHHHHH---HhcceeecccCcccceecchhheeeccchhhccc
Confidence 689999995 4898888732 56678889999999999999 6799999999999999999999999999999854
Q ss_pred CCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCC-cchhcc
Q 005278 566 GEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDG-LTEVVD 644 (704)
Q Consensus 566 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 644 (704)
.. ....+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|. ++..+.+|.+-....+ .....-
T Consensus 169 ~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 169 DT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred Cc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHHHH
Confidence 32 234555678999999999988889999999999999999999998765 3445666644221111 000000
Q ss_pred --------------ccchh-----hh------hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 645 --------------ANLVR-----EE------QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 645 --------------~~~~~-----~~------~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+.... .. .......-....+.+++.+|+..+|++|-+++++++
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 00000 00 000000011244678999999999999999999964
No 407
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=4.2e-30 Score=249.33 Aligned_cols=151 Identities=32% Similarity=0.500 Sum_probs=122.6
Q ss_pred cCeeeccCcccCCCCCccccCCCCCC-EEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEec
Q 005278 160 LQGLYLHGNKLQGSIPYDLCHLEGLS-ELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLS 238 (704)
Q Consensus 160 L~~L~L~~n~l~~~~~~~l~~l~~L~-~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 238 (704)
+..++++.|++. ++|..+..++.+. .+.+++|.++ .+|..++.+++|..|+|++|.+. .+|..++.+..|+.|+++
T Consensus 390 Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS 466 (565)
T KOG0472|consen 390 VTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLS 466 (565)
T ss_pred eEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheeccc
Confidence 455566666665 5566555554433 3455555555 78888889999999999999887 688888888889999999
Q ss_pred CcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCC
Q 005278 239 ANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLS 315 (704)
Q Consensus 239 ~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~ 315 (704)
.|++. .+|..+-.+..|+.+-.++|++....+..+.+|.+|..|||.+|.+. .+|..+++|.+|++|++++|+|.
T Consensus 467 ~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 467 FNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred ccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 99888 78888887888888888889998666666999999999999999998 89999999999999999999997
No 408
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.94 E-value=4e-30 Score=249.46 Aligned_cols=316 Identities=33% Similarity=0.460 Sum_probs=189.0
Q ss_pred CCCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCC
Q 005278 5 LPNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNC 84 (704)
Q Consensus 5 l~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l 84 (704)
+++++.|++++|++. .+|++++.+-.|+.|+..+|+++ ..|..+..+.+|..|++.+|++...+.. .-++
T Consensus 113 ~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~--------~i~m 182 (565)
T KOG0472|consen 113 LISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPEN--------HIAM 182 (565)
T ss_pred hhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhhCCHH--------HHHH
Confidence 344445555555554 44444555555555555555555 2333444444445555555544443322 2234
Q ss_pred CCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhc-CCCCcCee
Q 005278 85 RNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVG-RLRRLQGL 163 (704)
Q Consensus 85 ~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L 163 (704)
+.|++||...|-+. .+|+.++.+. +|.-|||..|++. ..| .|.+|+.|++|.++.|.|. .+|+... ++++|..|
T Consensus 183 ~~L~~ld~~~N~L~-tlP~~lg~l~-~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vL 257 (565)
T KOG0472|consen 183 KRLKHLDCNSNLLE-TLPPELGGLE-SLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVL 257 (565)
T ss_pred HHHHhcccchhhhh-cCChhhcchh-hhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceee
Confidence 55555555555544 3444444442 3555555555554 333 4555555555555555555 3444333 66777777
Q ss_pred eccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCC----------------------
Q 005278 164 YLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTST---------------------- 221 (704)
Q Consensus 164 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---------------------- 221 (704)
||+.|+++ ..|+.++.+++|++||+|+|.|+ .+|..++++ .|+.|.+.+|.+..+
T Consensus 258 DLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~ 334 (565)
T KOG0472|consen 258 DLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKD 334 (565)
T ss_pred eccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhcc
Confidence 77777776 66777777777777777777777 556666666 666666666654300
Q ss_pred ----------------CCCcccC---Cc--------------------------cccEEEecCcccC-------------
Q 005278 222 ----------------MPSSFGS---LE--------------------------YVLYINLSANSLN------------- 243 (704)
Q Consensus 222 ----------------~~~~~~~---l~--------------------------~L~~L~l~~N~l~------------- 243 (704)
.+..|.. +- -....+++.|++.
T Consensus 335 dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~elPk~L~~lkelv 414 (565)
T KOG0472|consen 335 DGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLCELPKRLVELKELV 414 (565)
T ss_pred CCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHhhhhhhhHHHHHHH
Confidence 0000000 00 0223444444433
Q ss_pred ----------CCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceee----------------------
Q 005278 244 ----------GSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQ---------------------- 291 (704)
Q Consensus 244 ----------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---------------------- 291 (704)
+.+|..++.+++|..|+|++|.+. .+|..++.+..|+.||++.|+|.
T Consensus 415 T~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi 493 (565)
T KOG0472|consen 415 TDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQI 493 (565)
T ss_pred HHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccc
Confidence 245666778888999999999888 88888898888999999988875
Q ss_pred ccC-CcccccccccceEEecccCCCCCCCCCcccccccCcccccCCCccC
Q 005278 292 GPV-PKSFGSLISLESLDLSRNNLSGEIPKNFSAQSFLSNYALCGPARLQ 340 (704)
Q Consensus 292 ~~~-p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~l~g~~~~~ 340 (704)
+.+ |+.+.+|.+|..|||.+|.+. .+|+.+.....+....+.|+|..+
T Consensus 494 ~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr~ 542 (565)
T KOG0472|consen 494 GSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFRQ 542 (565)
T ss_pred cccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccCC
Confidence 122 233778889999999999987 677788888888999999998653
No 409
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-26 Score=214.83 Aligned_cols=255 Identities=21% Similarity=0.287 Sum_probs=192.8
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEee-eeeCCeEEEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISN-CCNIDFKALVL 490 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~lv~ 490 (704)
.+.|.+.+.+|+|.||.+-+++++ +.+.+++|.+.... ...++|.+|...--.+ .|.||+.-++. |+..+.+++++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 357888999999999999999865 57889999886553 3456788887765555 58999987764 67778888999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC--CCCcEEEeeeccceecCCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD--ENMTAHVSDFGISKLLGEG 568 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~--~~~~~kl~Dfgla~~~~~~ 568 (704)
||++.|+|.+-+...+ +.+.....++.|++.|+.|+ |++.+||||||.+||||- +...+|+||||+.+..+..
T Consensus 102 E~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fM---HsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t 176 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFM---HSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT 176 (378)
T ss_pred ccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHh---hccchhhcccccceEEEecCCccEEEeeecccccccCce
Confidence 9999999999887644 67888899999999999999 778999999999999993 3458999999998865432
Q ss_pred CCcceeccccccccccCCcccCC-----CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 569 DDSVIQTMTIATIGYMAPEYGSE-----GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 569 ~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
. ....-+..|.+||.... -...+.+|+|.||+++|.++||+.||+.....+..+..|..-..... .
T Consensus 177 V-----~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~--~-- 247 (378)
T KOG1345|consen 177 V-----KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKN--P-- 247 (378)
T ss_pred e-----hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccC--c--
Confidence 1 12234567899996432 23667899999999999999999999976666666666654222111 1
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
...+.. .-+++.++.+..+-+..+|++|=-..++.++.+.
T Consensus 248 --~~P~~F------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 248 --ALPKKF------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred --cCchhh------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 111111 1234567788999999999999666666665544
No 410
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=8.9e-28 Score=247.26 Aligned_cols=253 Identities=22% Similarity=0.289 Sum_probs=200.3
Q ss_pred hCCCCccccccccCceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
.++|+....+|.|.||.||||+. .+++..|+|+++.....+...+++|+-+++..+||||+.++|.+...+...+.|||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 46889999999999999999984 57999999999887777778889999999999999999999999999999999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV 572 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~ 572 (704)
+.+|+|++.=+.. ..+++.++.-+++...+|++|| |+++-+|||||-.||++++.|.+|+.|||.+..+... -.
T Consensus 94 cgggslQdiy~~T-gplselqiayvcRetl~gl~yl---hs~gk~hRdiKGanilltd~gDvklaDfgvsaqitat--i~ 167 (829)
T KOG0576|consen 94 CGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLKYL---HSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITAT--IA 167 (829)
T ss_pred cCCCcccceeeec-ccchhHHHHHHHhhhhccchhh---hcCCcccccccccceeecccCceeecccCchhhhhhh--hh
Confidence 9999999855543 3478888888999999999999 7788999999999999999999999999998765432 12
Q ss_pred eeccccccccccCCccc---CCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchh
Q 005278 573 IQTMTIATIGYMAPEYG---SEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVR 649 (704)
Q Consensus 573 ~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (704)
......||+.|||||+. ..+.|..++|||+.|++..|+---+.|.-+..... -.........+ +
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr--~l~LmTkS~~q-------p---- 234 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR--ALFLMTKSGFQ-------P---- 234 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH--HHHHhhccCCC-------C----
Confidence 23346799999999964 56778999999999999999987777754332211 01111111100 0
Q ss_pred hhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 650 EEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 650 ~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
+...........+.++++.|+..+|++||++..+++
T Consensus 235 --p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 235 --PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred --CcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 111112233456788999999999999999987654
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.8e-25 Score=209.45 Aligned_cols=170 Identities=22% Similarity=0.160 Sum_probs=130.4
Q ss_pred CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceec
Q 005278 496 GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQT 575 (704)
Q Consensus 496 gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~ 575 (704)
|+|.+++...+..+++..++.++.|++.||+|||+. + ||+||+++.++.+|+ ||.+.......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~------ 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ------ 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc------
Confidence 789999987667799999999999999999999763 2 999999999999999 99998764321
Q ss_pred cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhh
Q 005278 576 MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFS 655 (704)
Q Consensus 576 ~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (704)
..||+.|+|||++.+..++.++|||||||++|||+||+.||.........+..+.....+.... ...
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~------------~~~ 130 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR------------DRS 130 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcc------------ccc
Confidence 2588999999999999999999999999999999999999965432222222222211111000 000
Q ss_pred hhHHHHH--HHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 656 VKIDCLL--SIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 656 ~~~~~~~--~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
....... .+.+++..||+.+|++||++.|+++.+......
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 1112222 688999999999999999999999998877544
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.9e-26 Score=212.73 Aligned_cols=249 Identities=22% Similarity=0.345 Sum_probs=193.1
Q ss_pred CccccccccCceEEEEEEECCCCEEEEEEeeccc--hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCC
Q 005278 418 NECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPN 495 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 495 (704)
....+|.+...|+.|+|+++ |..+++|++.... ....+.|.+|.-.++-+.||||..++|.|..+....++..||+.
T Consensus 193 nl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 193 NLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 34457889999999999987 5667778876543 33457899999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 496 GSLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 496 gsL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
|+|+..+++. ....+..+..+++.++|+|++|||.. ++-|.---+.+..|++|++.+++|+- +-+++ +...
T Consensus 272 gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarism-ad~kf------sfqe 343 (448)
T KOG0195|consen 272 GSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISM-ADTKF------SFQE 343 (448)
T ss_pred hHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheec-cccee------eeec
Confidence 9999999965 34467788999999999999999874 44455667999999999999888752 11111 1111
Q ss_pred ccccccccccCCcccCCCCC---CcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhh
Q 005278 575 TMTIATIGYMAPEYGSEGII---SPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREE 651 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~---~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 651 (704)
....-.|.||+||.+..++- -..+|+|||++++||+.|+..||.+..+.+....--. ++
T Consensus 344 ~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkial-----eg------------- 405 (448)
T KOG0195|consen 344 VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIAL-----EG------------- 405 (448)
T ss_pred cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-----cc-------------
Confidence 22345789999998876653 3479999999999999999999988765544322211 11
Q ss_pred hhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 652 QAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 652 ~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
-+...+...+..+.+++.-|+.+||.+||.++.|+-.|+++.
T Consensus 406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 122233345667788999999999999999999999999874
No 413
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1e-25 Score=260.99 Aligned_cols=195 Identities=18% Similarity=0.223 Sum_probs=137.8
Q ss_pred cCC-CCCceEEeee-------eeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEec
Q 005278 468 IRH-RNLIKIISNC-------CNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHC 539 (704)
Q Consensus 468 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~ 539 (704)
++| +||+++++++ ...+..+.++||+ +++|.+++......+++..+..++.||++||+|| |+++|+||
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~l---H~~gIvHr 104 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAA---HSQGIVVH 104 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHH---HhCCeeec
Confidence 445 5777888877 2234567788987 5699999987666699999999999999999999 56889999
Q ss_pred CCCCCCeeeCCC-------------------CcEEEeeeccceecCCCCC--------------cceeccccccccccCC
Q 005278 540 DLKPNNILLDEN-------------------MTAHVSDFGISKLLGEGDD--------------SVIQTMTIATIGYMAP 586 (704)
Q Consensus 540 dlk~~Nil~~~~-------------------~~~kl~Dfgla~~~~~~~~--------------~~~~~~~~gt~~y~aP 586 (704)
||||+|||++.. +.+|++|||+++....... ........||+.||||
T Consensus 105 DlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~AP 184 (793)
T PLN00181 105 NVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSP 184 (793)
T ss_pred cCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceECh
Confidence 999999999654 4455666666653211000 0011123578899999
Q ss_pred cccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHH
Q 005278 587 EYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMH 666 (704)
Q Consensus 587 E~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 666 (704)
|++.+..++.++|||||||++|||++|..|+.... .....+..... .+. ..........
T Consensus 185 E~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~--------~~~----------~~~~~~~~~~ 243 (793)
T PLN00181 185 EEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVL--------PPQ----------ILLNWPKEAS 243 (793)
T ss_pred hhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhc--------Chh----------hhhcCHHHHH
Confidence 99999999999999999999999999988865311 01111111000 000 0011233457
Q ss_pred HHhhhcCCCCCCCCCHHHHHH
Q 005278 667 LALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 667 l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
++.+||+++|.+||+|.|+++
T Consensus 244 ~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 244 FCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHhCCCChhhCcChHHHhh
Confidence 888999999999999999975
No 414
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=2.8e-24 Score=237.52 Aligned_cols=265 Identities=27% Similarity=0.383 Sum_probs=214.1
Q ss_pred CCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCC
Q 005278 7 NLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRN 86 (704)
Q Consensus 7 ~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~ 86 (704)
.-..|+|++|.++ .+|+.+. ++|+.|++.+|+++.+ |. .+++|++|+|++|+|+.++. ..++
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~L-P~---lp~~Lk~LdLs~N~LtsLP~-----------lp~s 263 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSL-PA---LPPELRTLEVSGNQLTSLPV-----------LPPG 263 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCCC-CC---CCCCCcEEEecCCccCcccC-----------cccc
Confidence 4568999999999 7888776 4899999999999964 43 36899999999999997642 1368
Q ss_pred CcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeecc
Q 005278 87 LTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLH 166 (704)
Q Consensus 87 L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 166 (704)
|+.|+|++|++.. +|. ++.+|+.|++.+|+++. +|. .+++|+.|+|++|.+.+ +|.. ..+|+.|+++
T Consensus 264 L~~L~Ls~N~L~~-Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~~-Lp~l---p~~L~~L~Ls 330 (788)
T PRK15387 264 LLELSIFSNPLTH-LPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLAS-LPAL---PSELCKLWAY 330 (788)
T ss_pred cceeeccCCchhh-hhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCcccc-CCCC---cccccccccc
Confidence 9999999999984 333 33579999999999984 443 35789999999999994 4542 2468899999
Q ss_pred CcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCC
Q 005278 167 GNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSL 246 (704)
Q Consensus 167 ~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 246 (704)
+|+|+ .+|.. ..+|++|+|++|+|+ .+|.. .++|+.|++++|.|+. +|.. ..+|+.|++++|.+++ +
T Consensus 331 ~N~L~-~LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-L 397 (788)
T PRK15387 331 NNQLT-SLPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-L 397 (788)
T ss_pred cCccc-ccccc---ccccceEecCCCccC-CCCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCcccC-C
Confidence 99998 45642 258999999999999 45653 3578899999999984 5543 3579999999999984 5
Q ss_pred CcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCCCCCCCCcc
Q 005278 247 PSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKNFS 323 (704)
Q Consensus 247 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~ 323 (704)
|.. .++|+.|++++|+++ .+|.. ..+|+.|++++|+|+ .+|..+.++++|+.|+|++|+|++..|..+.
T Consensus 398 P~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 398 PVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred CCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHH
Confidence 543 357999999999999 56754 356889999999999 7999999999999999999999998877553
No 415
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.8e-23 Score=211.94 Aligned_cols=167 Identities=21% Similarity=0.239 Sum_probs=129.5
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC--CCCEEEEEEeeccc-----hhhhHHHHHHHHHHHhcCCCCCce-EEeeeee
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQL-----ERASRSFDSECEILRSIRHRNLIK-IISNCCN 482 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~ 482 (704)
....++|...+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++|+|++. ++++
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 445678999999999999999999864 57788999865331 223456899999999999999985 4432
Q ss_pred CCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC-CCCCeeeCCCCcEEEeeecc
Q 005278 483 IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL-KPNNILLDENMTAHVSDFGI 561 (704)
Q Consensus 483 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dl-k~~Nil~~~~~~~kl~Dfgl 561 (704)
+..++||||+++++|... ... . ...++.+++++++|| |+.+|+|||| ||+||+++.++.+||+|||+
T Consensus 91 -~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~l---H~~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDL---HRAGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred -CCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHH---HHCCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 457999999999999632 111 1 146788999999999 5689999999 99999999999999999999
Q ss_pred ceecCCCCCcce------eccccccccccCCcccCCC
Q 005278 562 SKLLGEGDDSVI------QTMTIATIGYMAPEYGSEG 592 (704)
Q Consensus 562 a~~~~~~~~~~~------~~~~~gt~~y~aPE~~~~~ 592 (704)
|+.+........ -....+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 998755332111 1244688889999987543
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=3.1e-22 Score=238.84 Aligned_cols=313 Identities=22% Similarity=0.283 Sum_probs=192.7
Q ss_pred CCCCCCCEEecCCCc------CcccCCccccCCC-CCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhh
Q 005278 3 YMLPNLKYLTLFDNK------LSGTIPNSITNAS-KLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKW 75 (704)
Q Consensus 3 ~~l~~l~~L~l~~~~------i~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 75 (704)
..|++|+.|.+.++. +...+|..|..++ +|+.|++.++.++. .|..| ...+|++|++++|.+..+.
T Consensus 555 ~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~-lP~~f-~~~~L~~L~L~~s~l~~L~----- 627 (1153)
T PLN03210 555 KGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRC-MPSNF-RPENLVKLQMQGSKLEKLW----- 627 (1153)
T ss_pred hcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCC-CCCcC-CccCCcEEECcCccccccc-----
Confidence 356677777775442 2234555566654 46777777666663 34444 3566777777776665532
Q ss_pred cccccCCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhc
Q 005278 76 NFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVG 155 (704)
Q Consensus 76 ~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 155 (704)
..+..+++|++|+|++|.....+|. +..+ ++|++|+|.+|.....+|..+.++++|+.|++++|.....+|..+
T Consensus 628 ---~~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 628 ---DGVHSLTGLRNIDLRGSKNLKEIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred ---cccccCCCCCEEECCCCCCcCcCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 2245666677777766544334443 3332 356777776666555666666667777777776654333455443
Q ss_pred CCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccc------------------------------cCc
Q 005278 156 RLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCL------------------------------ASL 205 (704)
Q Consensus 156 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~------------------------------~~l 205 (704)
++++|+.|+|++|.....+|.. .++|++|+|++|.++ .+|..+ ...
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~ 777 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLS 777 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhcc
Confidence 5666666666666543344432 245666666666654 333221 123
Q ss_pred CCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeec
Q 005278 206 TSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSL 285 (704)
Q Consensus 206 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 285 (704)
++|+.|+|++|.....+|..++++++|+.|++++|...+.+|..+ ++++|+.|++++|.....+|.. ..+|+.|+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 467777777776666677778888888888888776444666555 6777888888877554455543 357788888
Q ss_pred cCceeeccCCcccccccccceEEecccCCCCCCCCCcccccccCcccccCCC
Q 005278 286 ADNQFQGPVPKSFGSLISLESLDLSRNNLSGEIPKNFSAQSFLSNYALCGPA 337 (704)
Q Consensus 286 ~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~~~~l~~~~l~g~~ 337 (704)
++|.++ .+|..+..+++|+.|++++|+--..+|.....+..+....+.+++
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCc
Confidence 888887 678888888888888888855444566655555556555555544
No 417
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.89 E-value=2.7e-25 Score=215.88 Aligned_cols=296 Identities=22% Similarity=0.261 Sum_probs=226.6
Q ss_pred EEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcE
Q 005278 10 YLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTV 89 (704)
Q Consensus 10 ~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~ 89 (704)
..+.++-.++ ++|..+. ++-++++|..|.|+.+.+++|+.+++|+.||||+|.|+.+.+.+ |..+++|.+
T Consensus 50 ~VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~A-------F~GL~~l~~ 119 (498)
T KOG4237|consen 50 IVDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDA-------FKGLASLLS 119 (498)
T ss_pred eEEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHh-------hhhhHhhhH
Confidence 4555666677 5665432 45788999999999999999999999999999999999988777 999999888
Q ss_pred EEccC-CCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCc
Q 005278 90 LGLAS-NPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGN 168 (704)
Q Consensus 90 L~L~~-n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 168 (704)
|-+.+ |+|+...-..|..+. +|+.|.+.-|++.-...+.|..+++|..|.+.+|.+..+--..|..+.+++.+++..|
T Consensus 120 Lvlyg~NkI~~l~k~~F~gL~-slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~n 198 (498)
T KOG4237|consen 120 LVLYGNNKITDLPKGAFGGLS-SLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQN 198 (498)
T ss_pred HHhhcCCchhhhhhhHhhhHH-HHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcC
Confidence 87777 899976667777764 6999999999999999999999999999999999999554558999999999999999
Q ss_pred ccC------------CCCCccccCCCCCCEEEcCCCcCCccCCccccCc-CCCCEEEecCccCCCCCC-CcccCCccccE
Q 005278 169 KLQ------------GSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASL-TSLRRLHLGSNKLTSTMP-SSFGSLEYVLY 234 (704)
Q Consensus 169 ~l~------------~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~~~~~-~~~~~l~~L~~ 234 (704)
.+- ...|..++.+.-..-..+.++++....+..|... .++..=..+.+...++.| ..|..+++|+.
T Consensus 199 p~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~ 278 (498)
T KOG4237|consen 199 PFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRK 278 (498)
T ss_pred ccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceE
Confidence 832 1234444555555555566666654444333321 122211222333333333 46788888889
Q ss_pred EEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCC
Q 005278 235 INLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNL 314 (704)
Q Consensus 235 L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l 314 (704)
|+|++|+++.+-+.+|.....++.|.|..|+|...-...|.++..|+.|+|.+|+|+..-|..|..+.+|..|+|-.|++
T Consensus 279 lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 279 LNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPF 358 (498)
T ss_pred eccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcc
Confidence 99999988888888888888889999999988866667788888899999999999888888888888899998888888
Q ss_pred CC
Q 005278 315 SG 316 (704)
Q Consensus 315 ~~ 316 (704)
.+
T Consensus 359 ~C 360 (498)
T KOG4237|consen 359 NC 360 (498)
T ss_pred cC
Confidence 64
No 418
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=7.4e-22 Score=203.98 Aligned_cols=261 Identities=19% Similarity=0.205 Sum_probs=195.1
Q ss_pred CCCccccccccCceEEEEEEECCC--CEEEEEEeeccchhhhHHHHHHHHHHHhcCC----CCCceEEeee-eeCCeEEE
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFDG--TNVAIKVFNLQLERASRSFDSECEILRSIRH----RNLIKIISNC-CNIDFKAL 488 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 488 (704)
+|.+.+.||+|+||.||.+...+. ..+|+|............+..|..++..+.. +++..+++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999986543 4788888665433322378889999999873 6899999998 47778899
Q ss_pred EEeccCCCCHHHHHhhCC-CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-----CcEEEeeeccc
Q 005278 489 VLEFMPNGSLEKWLYSHN-YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-----MTAHVSDFGIS 562 (704)
Q Consensus 489 v~e~~~~gsL~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-----~~~kl~Dfgla 562 (704)
||+.+ |.+|.++..... ..++..+...|+.|+..+|+++ |+.|++||||||.|+.++.. ..+.+.|||+|
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~l---H~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla 174 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDL---HSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA 174 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHH---HhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence 99977 779999886544 7799999999999999999999 67899999999999999854 46999999999
Q ss_pred e--ecCCCCC----cc-e-eccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhh
Q 005278 563 K--LLGEGDD----SV-I-QTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKES 634 (704)
Q Consensus 563 ~--~~~~~~~----~~-~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 634 (704)
+ .+..... .. . .....||..|+++....+...+.+.|+||++.++.|+..|..||........ ........
T Consensus 175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~~ 253 (322)
T KOG1164|consen 175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKDP 253 (322)
T ss_pred ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHHh
Confidence 8 3321111 11 1 2234599999999999999999999999999999999999999976433211 11110000
Q ss_pred cCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 635 LPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
... .... .....+..+.++...+-..+..++|....+...+++...+
T Consensus 254 ~~~----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 254 RKL----LTDR----------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhh----cccc----------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 000 0000 0112234555666666668999999999999998776554
No 419
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1e-21 Score=187.05 Aligned_cols=263 Identities=15% Similarity=0.184 Sum_probs=205.3
Q ss_pred CCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEEEEEec
Q 005278 415 NGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
-.|.+.++||+|.||+++.|+ +-+++.||||.-.. ..+..++..|.+..+.| ..++|...+-+..++.+-.||+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr--kS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR--KSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccc--cCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 378899999999999999998 66899999997432 33456788999999999 578999999888888888999998
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-----CcEEEeeeccceecCC
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-----MTAHVSDFGISKLLGE 567 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-----~~~kl~Dfgla~~~~~ 567 (704)
+ |.||.+...-.++.++..++..+|.|+..-++|+| ++..|.|||||+|+||... ..+.++|||+|+.+.+
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD 181 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD 181 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence 8 77999999888888999999999999999999995 5669999999999999743 3589999999998866
Q ss_pred CCCc-----ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh
Q 005278 568 GDDS-----VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 568 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
.... .-.....||.+||+-....+...+.+.|+-|+|-++++.+-|..||+++..... -..+- .+
T Consensus 182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn-K~kYe---------KI 251 (449)
T KOG1165|consen 182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN-KEKYE---------KI 251 (449)
T ss_pred ccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-HHHHH---------Hh
Confidence 4431 122334699999999999999999999999999999999999999998654321 11111 11
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEK 695 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~ 695 (704)
-+. ....+....+..++.++...+...-+.+-.+-|..+=+...+..+.+.
T Consensus 252 Ge~--Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 252 GET--KRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred ccc--cccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 110 011112233445566777777777777889999887777666665543
No 420
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.88 E-value=1.1e-21 Score=234.27 Aligned_cols=285 Identities=22% Similarity=0.317 Sum_probs=210.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEeccccc-CCCcccchhhcccccCCCC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNY-LMTESSAAKWNFLSSLTNC 84 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~~~~~~~~l 84 (704)
++|+.|++.++.++ .+|..| ...+|++|+|.+|.+. ..+..+..+++|++|+|++|. +..++ .+..+
T Consensus 589 ~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~Lk~L~Ls~~~~l~~ip---------~ls~l 656 (1153)
T PLN03210 589 PKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTGLRNIDLRGSKNLKEIP---------DLSMA 656 (1153)
T ss_pred cccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCCCCEEECCCCCCcCcCC---------ccccC
Confidence 35777888777776 566666 4677888888887777 345566777788888887764 33322 26667
Q ss_pred CCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeee
Q 005278 85 RNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLY 164 (704)
Q Consensus 85 ~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 164 (704)
++|++|+|++|.....+|..+..+. +|+.|++++|...+.+|..+ ++++|+.|+|++|......|.. .++|++|+
T Consensus 657 ~~Le~L~L~~c~~L~~lp~si~~L~-~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~ 731 (1153)
T PLN03210 657 TNLETLKLSDCSSLVELPSSIQYLN-KLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLD 731 (1153)
T ss_pred CcccEEEecCCCCccccchhhhccC-CCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeee
Confidence 7777888877766666777776664 57777777776555666554 6777777777777544344432 34566667
Q ss_pred ccCcccCCCCCccc------------------------------cCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEec
Q 005278 165 LHGNKLQGSIPYDL------------------------------CHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLG 214 (704)
Q Consensus 165 L~~n~l~~~~~~~l------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 214 (704)
+++|.++ .+|..+ ...++|+.|+|++|.....+|..+.++++|+.|+++
T Consensus 732 L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls 810 (1153)
T PLN03210 732 LDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIE 810 (1153)
T ss_pred cCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECC
Confidence 7776665 334321 123578899999998777899999999999999999
Q ss_pred CccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccC
Q 005278 215 SNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPV 294 (704)
Q Consensus 215 ~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 294 (704)
+|...+.+|..+ .+++|+.|++++|.....+|.. .++|+.|+|++|.++ .+|..+..+++|+.|+|++|+-...+
T Consensus 811 ~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l 885 (1153)
T PLN03210 811 NCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRV 885 (1153)
T ss_pred CCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCcc
Confidence 986544677665 7899999999998765555543 367999999999998 78999999999999999996544478
Q ss_pred CcccccccccceEEecccC
Q 005278 295 PKSFGSLISLESLDLSRNN 313 (704)
Q Consensus 295 p~~~~~l~~L~~L~l~~N~ 313 (704)
|..+..+++|+.+++++|.
T Consensus 886 ~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 886 SLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred CcccccccCCCeeecCCCc
Confidence 8888999999999999986
No 421
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-24 Score=230.93 Aligned_cols=304 Identities=31% Similarity=0.361 Sum_probs=201.2
Q ss_pred CCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCC
Q 005278 8 LKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNL 87 (704)
Q Consensus 8 l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L 87 (704)
++.++|..|.+.+.++..+.++.+ .|+|.+|.+.. -.+..+.+|+.|...+|+++.... ..++|
T Consensus 158 ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~---~dls~~~~l~~l~c~rn~ls~l~~-----------~g~~l 221 (1081)
T KOG0618|consen 158 IKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEV---LDLSNLANLEVLHCERNQLSELEI-----------SGPSL 221 (1081)
T ss_pred chhhhhhhhhcccchhcchhhhhe--eeecccchhhh---hhhhhccchhhhhhhhcccceEEe-----------cCcch
Confidence 677888888888888887777777 78888888882 235677778888888888776542 33577
Q ss_pred cEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccC
Q 005278 88 TVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHG 167 (704)
Q Consensus 88 ~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 167 (704)
+.|+.++|.+....+. ..+.+|++++++.|+++ .+|+.++.+.+|+.|+..+|.+. .+|..+..+++|+.|.+..
T Consensus 222 ~~L~a~~n~l~~~~~~---p~p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~ 296 (1081)
T KOG0618|consen 222 TALYADHNPLTTLDVH---PVPLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAY 296 (1081)
T ss_pred heeeeccCcceeeccc---cccccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhh
Confidence 7777777777633222 22346777777777777 44477777777777777777775 6666666677777777777
Q ss_pred cccCCCCCccccCCCCCCEEEcCCCcCCccCCcccc-------------------------CcCCCCEEEecCccCCCCC
Q 005278 168 NKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLA-------------------------SLTSLRRLHLGSNKLTSTM 222 (704)
Q Consensus 168 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-------------------------~l~~L~~L~l~~n~l~~~~ 222 (704)
|.+. -+|..+.+++.|+.|+|..|+|....+..+. .++.|+.|++.+|.++...
T Consensus 297 nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c 375 (1081)
T KOG0618|consen 297 NELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSC 375 (1081)
T ss_pred hhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccc
Confidence 7776 5566666667777777777766622111111 1234556666666666655
Q ss_pred CCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCccccccc
Q 005278 223 PSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLI 302 (704)
Q Consensus 223 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 302 (704)
-..+.++.+|+.|+|++|++.......+.+++.|+.|+||+|+++ .+|..+..++.|++|...+|++. ..| .+..++
T Consensus 376 ~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~ 452 (1081)
T KOG0618|consen 376 FPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLP 452 (1081)
T ss_pred hhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcC
Confidence 556666777777777777777555555667777777777777777 66677777777777777777776 555 666777
Q ss_pred ccceEEecccCCCCC-CCCCcccccccCcccccCCC
Q 005278 303 SLESLDLSRNNLSGE-IPKNFSAQSFLSNYALCGPA 337 (704)
Q Consensus 303 ~L~~L~l~~N~l~~~-~p~~~~~~~~l~~~~l~g~~ 337 (704)
.|+.+|+|.|+++.. +|.... .+.+..+.++|+.
T Consensus 453 qL~~lDlS~N~L~~~~l~~~~p-~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 453 QLKVLDLSCNNLSEVTLPEALP-SPNLKYLDLSGNT 487 (1081)
T ss_pred cceEEecccchhhhhhhhhhCC-CcccceeeccCCc
Confidence 777777777777642 222221 1445555666665
No 422
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.87 E-value=4.4e-22 Score=220.20 Aligned_cols=247 Identities=27% Similarity=0.320 Sum_probs=198.2
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCR 85 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~ 85 (704)
++|+.|++.+|+++ .+|. ..++|++|+|++|+++.+ |.. .++|++|+|++|.+..++. ...
T Consensus 222 ~~L~~L~L~~N~Lt-~LP~---lp~~Lk~LdLs~N~LtsL-P~l---p~sL~~L~Ls~N~L~~Lp~-----------lp~ 282 (788)
T PRK15387 222 AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSL-PVL---PPGLLELSIFSNPLTHLPA-----------LPS 282 (788)
T ss_pred cCCCEEEccCCcCC-CCCC---CCCCCcEEEecCCccCcc-cCc---ccccceeeccCCchhhhhh-----------chh
Confidence 47899999999999 5675 368999999999999965 432 4689999999999987542 125
Q ss_pred CCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeec
Q 005278 86 NLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYL 165 (704)
Q Consensus 86 ~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 165 (704)
+|+.|+|++|+++. +|. .+++|+.|+|++|++++. |.. ..+|+.|++++|.++. +|.. ..+|+.|+|
T Consensus 283 ~L~~L~Ls~N~Lt~-LP~----~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdL 349 (788)
T PRK15387 283 GLCKLWIFGNQLTS-LPV----LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSV 349 (788)
T ss_pred hcCEEECcCCcccc-ccc----cccccceeECCCCccccC-CCC---cccccccccccCcccc-cccc---ccccceEec
Confidence 78999999999984 343 345799999999999963 432 3468889999999984 5532 258999999
Q ss_pred cCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCC
Q 005278 166 HGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGS 245 (704)
Q Consensus 166 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 245 (704)
++|+|+ .+|.. .++|+.|++++|+|+ .+|.. ..+|+.|++++|.|++ +|.. .++|+.|++++|.++.
T Consensus 350 S~N~Ls-~LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss- 416 (788)
T PRK15387 350 SDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS- 416 (788)
T ss_pred CCCccC-CCCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-
Confidence 999999 45643 357889999999999 46653 3579999999999985 5543 3689999999999984
Q ss_pred CCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccc
Q 005278 246 LPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSL 301 (704)
Q Consensus 246 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 301 (704)
+|..+ .+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..|..+..+
T Consensus 417 IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 417 LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 66543 46889999999999 789999999999999999999998887766443
No 423
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=1.6e-24 Score=210.52 Aligned_cols=278 Identities=24% Similarity=0.267 Sum_probs=234.8
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEeccc-ccCCCcccchhhcccccCCCC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAY-NYLMTESSAAKWNFLSSLTNC 84 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~-n~i~~~~~~~~~~~~~~~~~l 84 (704)
+..+.++|..|.|+.+-+.+|+.+++|+.|||++|.|+.|.|++|.++++|.+|.+-+ |+|+.+...+ |.++
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~-------F~gL 139 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGA-------FGGL 139 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhH-------hhhH
Confidence 4567899999999988889999999999999999999999999999999998888866 9999999887 9999
Q ss_pred CCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcC------------ccccCh
Q 005278 85 RNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDL------------NGTIPT 152 (704)
Q Consensus 85 ~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l------------~~~~~~ 152 (704)
.+|+.|.+.-|++.......|..+. +|..|.+.+|.+...-...|..+..++++.+..|.+ ....|.
T Consensus 140 ~slqrLllNan~i~Cir~~al~dL~-~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~i 218 (498)
T KOG4237|consen 140 SSLQRLLLNANHINCIRQDALRDLP-SLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPI 218 (498)
T ss_pred HHHHHHhcChhhhcchhHHHHHHhh-hcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchh
Confidence 9999999999999988888888885 799999999999977777999999999999999983 234455
Q ss_pred hhcCCCCcCeeeccCcccCCCCCccccCC-CCCCEEEcCCCcCCccCC-ccccCcCCCCEEEecCccCCCCCCCcccCCc
Q 005278 153 AVGRLRRLQGLYLHGNKLQGSIPYDLCHL-EGLSELNLNGNKLCGHVP-PCLASLTSLRRLHLGSNKLTSTMPSSFGSLE 230 (704)
Q Consensus 153 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~l-~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 230 (704)
.++...-..-..+.++++..+.+..|... ..+..=..+.+...+.-| ..|..+++|+.|+|++|.|+.+-+.+|.+..
T Consensus 219 etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a 298 (498)
T KOG4237|consen 219 ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA 298 (498)
T ss_pred hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh
Confidence 66677777777778888775555554432 233222223333333444 4688999999999999999999999999999
Q ss_pred cccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceee
Q 005278 231 YVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQ 291 (704)
Q Consensus 231 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 291 (704)
.+++|.|..|++.......|.++..|+.|+|.+|+|+..-|.+|..+..|..|+|-.|.+.
T Consensus 299 ~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~ 359 (498)
T KOG4237|consen 299 ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFN 359 (498)
T ss_pred hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCccc
Confidence 9999999999998777788899999999999999999888999999999999999999876
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=1.5e-21 Score=177.72 Aligned_cols=261 Identities=18% Similarity=0.194 Sum_probs=199.0
Q ss_pred HhCCCCccccccccCceEEEEEE-ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCC-CCCceEEeeeeeCCeEEEEE
Q 005278 413 ATNGFNECNLLGTGSFGSVYKGT-LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH-RNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 413 ~~~~~~~~~~ig~G~~g~V~~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 490 (704)
....|..+++||.|+||.+|.|. ..+|+.||+|+-+... ...++..|..+.+.+++ ..|..+..+..+...-.+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 35689999999999999999998 6689999999854432 22467789999999974 67777788888888889999
Q ss_pred eccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC---CCCcEEEeeeccceecCC
Q 005278 491 EFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD---ENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 491 e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~---~~~~~kl~Dfgla~~~~~ 567 (704)
|.+ |.+|.+.+.-..+.++..++.-.+.|+..-++|+ |.++++||||||+|+|.+ ....+.++|||+|+.+.+
T Consensus 91 dLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyv---H~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYV---HLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred ecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHH---HhhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 988 7799999987777799999999999999999999 557799999999999997 345689999999988754
Q ss_pred CCCc-----ceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccc--cHHHHHHhhcCCCcc
Q 005278 568 GDDS-----VIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEM--SLKHWVKESLPDGLT 640 (704)
Q Consensus 568 ~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 640 (704)
.... .......||.+|.+-....+...+.+.|+-|+|.++.+.-.|..||++...... -+.........
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s---- 242 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMS---- 242 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcC----
Confidence 3321 122334799999998888877888899999999999999999999998643211 11111111000
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhH
Q 005278 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIK 693 (704)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~ 693 (704)
-+....+..+|.++.-.+..|-..--++-|...-+-+.++-+.
T Consensus 243 ----------~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLf 285 (341)
T KOG1163|consen 243 ----------TPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILF 285 (341)
T ss_pred ----------CCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHH
Confidence 0112233455666777788888888888888776666665543
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=5e-22 Score=221.41 Aligned_cols=247 Identities=24% Similarity=0.396 Sum_probs=120.7
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCR 85 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~ 85 (704)
.+.+.|+|+++.++ .+|..+. ++|+.|+|++|+++.+ |..+. ++|++|++++|.++.++.. + ..
T Consensus 178 ~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~LtsL-P~~l~--~nL~~L~Ls~N~LtsLP~~--------l--~~ 241 (754)
T PRK15370 178 NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKSL-PENLQ--GNIKTLYANSNQLTSIPAT--------L--PD 241 (754)
T ss_pred cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCcC-Chhhc--cCCCEEECCCCccccCChh--------h--hc
Confidence 34566666666666 4555443 4566666666666643 33332 3566666666666554321 1 13
Q ss_pred CCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeec
Q 005278 86 NLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYL 165 (704)
Q Consensus 86 ~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 165 (704)
+|+.|+|++|++. .+|..+. .+|+.|++++|++. .+|..+. ++|+.|++++|+|+. +|..+. ++|+.|++
T Consensus 242 ~L~~L~Ls~N~L~-~LP~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~L 311 (754)
T PRK15370 242 TIQEMELSINRIT-ELPERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNV 311 (754)
T ss_pred cccEEECcCCccC-cCChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHh
Confidence 5666666666665 3344332 24555555555555 2333322 245555555555542 232221 24444555
Q ss_pred cCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCC
Q 005278 166 HGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGS 245 (704)
Q Consensus 166 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 245 (704)
++|+++ .+|..+. + +|+.|++++|.++. +|..+. ++|+.|++++|.++ .
T Consensus 312 s~N~Lt-~LP~~l~--~------------------------sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~ 360 (754)
T PRK15370 312 QSNSLT-ALPETLP--P------------------------GLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-V 360 (754)
T ss_pred cCCccc-cCCcccc--c------------------------cceeccccCCcccc-CChhhc--CcccEEECCCCCCC-c
Confidence 555544 2332221 3 44444555554442 333322 34555555555544 2
Q ss_pred CCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCccc----ccccccceEEecccCCC
Q 005278 246 LPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSF----GSLISLESLDLSRNNLS 315 (704)
Q Consensus 246 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~----~~l~~L~~L~l~~N~l~ 315 (704)
+|..+. ++|+.|++++|+++ .+|..+. ..|+.|++++|+++ .+|..+ ..++++..|++.+|+++
T Consensus 361 LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 361 LPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 333332 34555555555555 3443332 24555666666655 344332 23355566666666665
No 426
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.86 E-value=1.1e-23 Score=225.11 Aligned_cols=282 Identities=31% Similarity=0.401 Sum_probs=188.2
Q ss_pred CCE-EecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCC
Q 005278 8 LKY-LTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRN 86 (704)
Q Consensus 8 l~~-L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~ 86 (704)
++. |+|.+|++. .-.+.++.+|+.|..+.|.+.... ..-++|+.|+.++|.+..... -..-.+
T Consensus 179 l~~~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~---------~p~p~n 242 (1081)
T KOG0618|consen 179 LTHQLDLRYNEME---VLDLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV---------HPVPLN 242 (1081)
T ss_pred hheeeecccchhh---hhhhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc---------cccccc
Confidence 444 888888876 223666777777777777766431 223445555555555442211 112234
Q ss_pred CcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcC-----
Q 005278 87 LTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQ----- 161 (704)
Q Consensus 87 L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~----- 161 (704)
|+++++++|+++. .|.++..+ .+|+.+.+.+|.+. .+|..+...++|+.|++..|.+. -+|....+++.|+
T Consensus 243 l~~~dis~n~l~~-lp~wi~~~-~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~ 318 (1081)
T KOG0618|consen 243 LQYLDISHNNLSN-LPEWIGAC-ANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQ 318 (1081)
T ss_pred ceeeecchhhhhc-chHHHHhc-ccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeeh
Confidence 5555555555542 23444443 24555555555552 44444444444444444444444 3333444444444
Q ss_pred --------------------eeeccCcccCCCCC-ccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCC
Q 005278 162 --------------------GLYLHGNKLQGSIP-YDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTS 220 (704)
Q Consensus 162 --------------------~L~L~~n~l~~~~~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 220 (704)
.|+.+.|.+. ..| -.=..++.|++|++.+|.+++..-+.+.++++|+.|+|++|+|..
T Consensus 319 ~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~ 397 (1081)
T KOG0618|consen 319 SNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNS 397 (1081)
T ss_pred hccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeeccccccc
Confidence 4444444444 222 111123568899999999998777789999999999999999997
Q ss_pred CCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeec-cCCcccc
Q 005278 221 TMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQG-PVPKSFG 299 (704)
Q Consensus 221 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~p~~~~ 299 (704)
.....+.+++.|++|+||+|+++ .+|..+.+++.|++|...+|++. ..| .+..++.|+.+|++.|+++. .+|....
T Consensus 398 fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p 474 (1081)
T KOG0618|consen 398 FPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALP 474 (1081)
T ss_pred CCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCC
Confidence 77778899999999999999999 88899999999999999999999 788 79999999999999999985 4455444
Q ss_pred cccccceEEecccCC
Q 005278 300 SLISLESLDLSRNNL 314 (704)
Q Consensus 300 ~l~~L~~L~l~~N~l 314 (704)
+ ++|++||++||.-
T Consensus 475 ~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 475 S-PNLKYLDLSGNTR 488 (1081)
T ss_pred C-cccceeeccCCcc
Confidence 4 8999999999984
No 427
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=3.5e-22 Score=218.69 Aligned_cols=261 Identities=22% Similarity=0.247 Sum_probs=192.5
Q ss_pred ccccccccCceEEEEEEE-CCCCEEEEEEeec----c-ch-hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEe
Q 005278 419 ECNLLGTGSFGSVYKGTL-FDGTNVAIKVFNL----Q-LE-RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLE 491 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~----~-~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 491 (704)
..+++|.|++|.|+.... ......+.|.++. . .. .....+..|.-+-..+.|+|++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 457899999998877763 2344444444331 1 11 111225667777788899999888888777666666699
Q ss_pred ccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 492 FMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 492 ~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
|++. +|..++.+. ..+....+-.++.|+..|++|+ |+.||.|||+|++|++++.++.+||+|||.+....-....
T Consensus 402 ~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~---h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~ 476 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYL---HSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEK 476 (601)
T ss_pred cccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHH---HhcCceeccCccccEEEecCCceEEeecCcceeeccCcch
Confidence 9999 999988765 3377888899999999999999 6789999999999999999999999999999876544333
Q ss_pred --ceeccccccccccCCcccCCCCCCc-ccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccch
Q 005278 572 --VIQTMTIATIGYMAPEYGSEGIISP-KSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLV 648 (704)
Q Consensus 572 --~~~~~~~gt~~y~aPE~~~~~~~~~-~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (704)
.......|+..|+|||++.+..|.+ ..||||.|+++..|.+|+.||......+..+.. ........
T Consensus 477 ~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~-----------~~~~~~~~ 545 (601)
T KOG0590|consen 477 NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT-----------NNYSDQRN 545 (601)
T ss_pred hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh-----------hccccccc
Confidence 4455678999999999999988877 489999999999999999999765444333200 00001111
Q ss_pred hhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHHHhhhhhc
Q 005278 649 REEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKEKFLDDVA 701 (704)
Q Consensus 649 ~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~~~~~~~~ 701 (704)
...+........+..-..++..+++++|.+|-|+.+| +.+.|.+.+.
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i------~~d~W~~~i~ 592 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQI------LNDEWIRSIE 592 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCChhheecHHHH------hhChHhhhcc
Confidence 1112233444556777889999999999999999999 5556655554
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=2.5e-21 Score=215.82 Aligned_cols=246 Identities=25% Similarity=0.387 Sum_probs=180.4
Q ss_pred CCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcC
Q 005278 54 GSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNL 133 (704)
Q Consensus 54 ~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l 133 (704)
.+.+.|+++++.++.++.. + .++|+.|+|++|+|+ .+|..+. .+|++|++++|+++ .+|..+.
T Consensus 178 ~~~~~L~L~~~~LtsLP~~--------I--p~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~-- 240 (754)
T PRK15370 178 NNKTELRLKILGLTTIPAC--------I--PEQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLP-- 240 (754)
T ss_pred cCceEEEeCCCCcCcCCcc--------c--ccCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhh--
Confidence 3467777777777765432 1 246777777777777 3454443 36778888887777 3455443
Q ss_pred CCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEe
Q 005278 134 SGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHL 213 (704)
Q Consensus 134 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 213 (704)
.+|+.|+|++|.+. .+|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ++|+.|++
T Consensus 241 ~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt-~LP~~lp--~sL~~L~L 311 (754)
T PRK15370 241 DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIR-TLPAHLP--SGITHLNV 311 (754)
T ss_pred ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccc-cCcccch--hhHHHHHh
Confidence 47889999999988 5666654 57999999999998 5677664 58999999999998 4565443 47999999
Q ss_pred cCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeecc
Q 005278 214 GSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGP 293 (704)
Q Consensus 214 ~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 293 (704)
++|.++. +|..+. ++|+.|++++|.++. +|..+. ++|+.|++++|+++ .+|..+. ++|+.|+|++|+++ .
T Consensus 312 s~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~ 381 (754)
T PRK15370 312 QSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-N 381 (754)
T ss_pred cCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-C
Confidence 9999984 555443 689999999999984 666554 68999999999998 6776553 68999999999999 6
Q ss_pred CCcccccccccceEEecccCCCCCCCCCccc----ccccCcccccCCCc
Q 005278 294 VPKSFGSLISLESLDLSRNNLSGEIPKNFSA----QSFLSNYALCGPAR 338 (704)
Q Consensus 294 ~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~----~~~l~~~~l~g~~~ 338 (704)
+|..+. .+|+.|++++|+++ .+|..+.. .+.+....+.+++.
T Consensus 382 LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npl 427 (754)
T PRK15370 382 LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPF 427 (754)
T ss_pred CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCc
Confidence 776654 37999999999998 55654322 23344455666653
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=4.7e-20 Score=193.37 Aligned_cols=258 Identities=31% Similarity=0.379 Sum_probs=196.8
Q ss_pred CCccccccccCceEEEEEEECCCCEEEEEEeeccchh---hhHHHHHHHHHHHhcCCC-CCceEEeeeeeCCeEEEEEec
Q 005278 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER---ASRSFDSECEILRSIRHR-NLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 492 (704)
|.....||.|+||.||++... ..+++|.+...... ....+.+|+..++.+.|+ +++++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999866 88899998765432 367799999999999988 799999999777778999999
Q ss_pred cCCCCHHHHHhhCC--CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeeccceecCCCC
Q 005278 493 MPNGSLEKWLYSHN--YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFGISKLLGEGD 569 (704)
Q Consensus 493 ~~~gsL~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfgla~~~~~~~ 569 (704)
+.++++.+++.... ..+.......++.+++.+++|+ |+.+++|||+||+||+++..+ .++++|||.+.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYL---HSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH---HhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 99999997776554 2588999999999999999999 557799999999999999988 79999999998665433
Q ss_pred Ccc----eeccccccccccCCcccCC---CCCCcccceeeHHHHHHHHhhCCCCCCccccc--cccHHHHHHhhcCCCcc
Q 005278 570 DSV----IQTMTIATIGYMAPEYGSE---GIISPKSDVYSYGILLMETFTRKKPTNEIFIG--EMSLKHWVKESLPDGLT 640 (704)
Q Consensus 570 ~~~----~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~ 640 (704)
... ......|+..|+|||...+ .......|+||+|++++++++|..||...... .......+.........
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 221 2355679999999999887 57888999999999999999999997653321 11111111111111000
Q ss_pred hhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 641 EVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
........ ......+.+++..|+..+|..|.++.+....
T Consensus 237 ~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNP---------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCcccc---------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 00000000 1223467789999999999999998887654
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-20 Score=195.86 Aligned_cols=217 Identities=27% Similarity=0.376 Sum_probs=166.8
Q ss_pred HHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 005278 465 LRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPN 544 (704)
Q Consensus 465 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~ 544 (704)
|+.+.|.|+.+++|.+.++...+.|.+|+..|+|.+.+......+++.....++++++.|++|+|+ ++...|+.++++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeeccc
Confidence 356789999999999999999999999999999999999888889999999999999999999974 333399999999
Q ss_pred CeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCC-------CCCcccceeeHHHHHHHHhhCCCCC
Q 005278 545 NILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEG-------IISPKSDVYSYGILLMETFTRKKPT 617 (704)
Q Consensus 545 Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-------~~~~~~Dv~s~Gv~l~el~tg~~p~ 617 (704)
|+++|....+|++|||+.....+...........-..-|.|||.+... ..+.+.||||||++++|+++.+.||
T Consensus 79 nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~ 158 (484)
T KOG1023|consen 79 NCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPF 158 (484)
T ss_pred cceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCcc
Confidence 999999999999999998876432122222223345679999987653 1467899999999999999999999
Q ss_pred Cccccccc--cHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHHhHH
Q 005278 618 NEIFIGEM--SLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKKIKE 694 (704)
Q Consensus 618 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~~~~ 694 (704)
+....... ....+++. .......+.+.... +..+.+..++..||..+|.+||++++|-..++.+..
T Consensus 159 ~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~~-------e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 159 DLRNLVEDPDEIILRVKK----GGSNPFRPSIELLN-------ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccccccCChHHHHHHHHh----cCCCCcCcchhhhh-------hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 87433332 22222222 11112222221111 334468889999999999999999999888887654
No 431
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.84 E-value=1.5e-20 Score=177.40 Aligned_cols=140 Identities=19% Similarity=0.176 Sum_probs=108.3
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccchh--h------------------------hHHHHHHHHHHHhcCCCCC
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--A------------------------SRSFDSECEILRSIRHRNL 473 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni 473 (704)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3689999999999999778999999998754211 0 1123459999999988776
Q ss_pred ceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCc
Q 005278 474 IKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMT 553 (704)
Q Consensus 474 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~ 553 (704)
.....+.. ...++||||++++++....... ..++......++.|++.+++|+| |+.+|+||||||+||+++ ++.
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~--H~~giiHrDlkP~NIli~-~~~ 155 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILY--QDCRLVHADLSEYNLLYH-DGK 155 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHH--HhCCcccCCCCHHHEEEE-CCc
Confidence 44333222 2237999999988776553332 34788899999999999999996 356899999999999998 478
Q ss_pred EEEeeeccceec
Q 005278 554 AHVSDFGISKLL 565 (704)
Q Consensus 554 ~kl~Dfgla~~~ 565 (704)
++++|||+|...
T Consensus 156 v~LiDFG~a~~~ 167 (190)
T cd05147 156 LYIIDVSQSVEH 167 (190)
T ss_pred EEEEEccccccC
Confidence 999999999864
No 432
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.84 E-value=6.8e-21 Score=180.99 Aligned_cols=172 Identities=14% Similarity=0.144 Sum_probs=132.6
Q ss_pred HHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhH---------HHHHHHHHHHhcCCCCCceEEeeeee
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASR---------SFDSECEILRSIRHRNLIKIISNCCN 482 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~---------~~~~e~~~l~~l~h~niv~l~~~~~~ 482 (704)
...++|...+++|.|+||.||.+.. ++..+|+|.++........ .+++|+..+.+++|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3468999999999999999999765 5778999999755432222 26899999999999999999988654
Q ss_pred C--------CeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 483 I--------DFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 483 ~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
. ...++||||++|.+|.++.. ++. ....+++.++..+ |+.+++|||++|+||++++++ +
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~l---H~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESL---HQHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHH---HHcCCccCCCChHHEEEeCCC-E
Confidence 3 35789999999999988732 222 3456889999999 568999999999999999988 9
Q ss_pred EEeeeccceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHh
Q 005278 555 HVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETF 611 (704)
Q Consensus 555 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~ 611 (704)
+++|||........... ..+.....+..++|+||||+++....
T Consensus 174 ~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999987654211100 01334445667899999999987654
No 433
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.82 E-value=5.2e-22 Score=206.43 Aligned_cols=284 Identities=23% Similarity=0.243 Sum_probs=158.1
Q ss_pred EEecCCCcCc-ccCCccccCCCCCCEEeccCcccccc----CchhhcCCCCCCEEecccccCCCcccchhhcccccCCCC
Q 005278 10 YLTLFDNKLS-GTIPNSITNASKLIMLDLSSNSFSGL----IPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNC 84 (704)
Q Consensus 10 ~L~l~~~~i~-~~~~~~~~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l 84 (704)
.|+|.++.++ ......|..+.+|++|++++|.+++. ++..+...++|++|+++++.+...... ...++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~-~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRG-LQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchH-HHHHHHHHHhc
Confidence 5778888877 45556677788899999998888643 445566777888888888877631111 11134456678
Q ss_pred CCCcEEEccCCCCcccCChhhhhccc--ccceEEecCCcccc----cCChhhhcC-CCCCEEEccCCcCccc----cChh
Q 005278 85 RNLTVLGLASNPLRGILPPLIGNFSA--SLQEFYAYGCKLRG----NIPQEIGNL-SGMIVFDLNGCDLNGT----IPTA 153 (704)
Q Consensus 85 ~~L~~L~L~~n~i~~~~~~~~~~~~~--~L~~L~l~~n~l~~----~~~~~~~~l-~~L~~L~L~~n~l~~~----~~~~ 153 (704)
++|++|+|++|.+....+..+..+.. +|++|++++|.+.+ .+...+..+ ++|++|++++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 88888888888887665555555432 26666666665542 222333444 5555555555555421 2223
Q ss_pred hcCCCCcCeeeccCcccCCC----CCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCC
Q 005278 154 VGRLRRLQGLYLHGNKLQGS----IPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSL 229 (704)
Q Consensus 154 ~~~l~~L~~L~L~~n~l~~~----~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 229 (704)
+..+++|++|+|++|.+++. ++..+..+++|++|++++|.+++.... .....+..+
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~--------------------~l~~~~~~~ 220 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS--------------------ALAETLASL 220 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH--------------------HHHHHhccc
Confidence 33444455555555554421 112223334444444444444321110 111223344
Q ss_pred ccccEEEecCcccCCCCCcccc-----cCcCCcEEEeecCccCC----CCCCCcCCCCCcceeeccCceeecc----CCc
Q 005278 230 EYVLYINLSANSLNGSLPSNIQ-----NLKVLTNLDLSRNQLSG----DIPTTIGGLENLETLSLADNQFQGP----VPK 296 (704)
Q Consensus 230 ~~L~~L~l~~N~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~~~----~p~ 296 (704)
++|++|++++|.+++.....+. ..++|+.|++++|.++. .+...+..+++|+.+++++|.++.. ...
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 5555555555555432222221 13567777777777752 2233455567788888888887743 333
Q ss_pred ccccc-cccceEEecccCC
Q 005278 297 SFGSL-ISLESLDLSRNNL 314 (704)
Q Consensus 297 ~~~~l-~~L~~L~l~~N~l 314 (704)
.+... +.|+.+++.+|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 301 SLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhhcCCchhhcccCCCCC
Confidence 34444 6778888887764
No 434
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.82 E-value=9.7e-22 Score=204.39 Aligned_cols=236 Identities=22% Similarity=0.234 Sum_probs=167.4
Q ss_pred CCCCCCEEecCCCcCcc----cCCccccCCCCCCEEeccCccccc------cCchhhcCCCCCCEEecccccCCCcccch
Q 005278 4 MLPNLKYLTLFDNKLSG----TIPNSITNASKLIMLDLSSNSFSG------LIPNTFGNLGSLQVLSLAYNYLMTESSAA 73 (704)
Q Consensus 4 ~l~~l~~L~l~~~~i~~----~~~~~~~~l~~L~~L~L~~n~i~~------~~~~~~~~l~~L~~L~L~~n~i~~~~~~~ 73 (704)
.+++|+.|++++|.++. .++..+...++|++|+++++.+.. ..+..|..+++|++|+|++|.+.......
T Consensus 21 ~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~ 100 (319)
T cd00116 21 KLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGPDGCGV 100 (319)
T ss_pred HHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCChhHHHH
Confidence 35679999999999953 366677888999999999998872 34457888999999999999997644433
Q ss_pred hhcccccCCCCCCCcEEEccCCCCcccCC----hhhhhcccccceEEecCCcccc----cCChhhhcCCCCCEEEccCCc
Q 005278 74 KWNFLSSLTNCRNLTVLGLASNPLRGILP----PLIGNFSASLQEFYAYGCKLRG----NIPQEIGNLSGMIVFDLNGCD 145 (704)
Q Consensus 74 ~~~~~~~~~~l~~L~~L~L~~n~i~~~~~----~~~~~~~~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~ 145 (704)
+...... ++|++|++++|++.+... ..+..+.++|++|++++|.+++ .++..+..+.+|++|++++|.
T Consensus 101 ---~~~l~~~-~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~ 176 (319)
T cd00116 101 ---LESLLRS-SSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNG 176 (319)
T ss_pred ---HHHHhcc-CcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCC
Confidence 1111222 569999999999984332 3334443689999999999984 345567788899999999999
Q ss_pred Cccc----cChhhcCCCCcCeeeccCcccCCCC----CccccCCCCCCEEEcCCCcCCccCCcccc-----CcCCCCEEE
Q 005278 146 LNGT----IPTAVGRLRRLQGLYLHGNKLQGSI----PYDLCHLEGLSELNLNGNKLCGHVPPCLA-----SLTSLRRLH 212 (704)
Q Consensus 146 l~~~----~~~~~~~l~~L~~L~L~~n~l~~~~----~~~l~~l~~L~~L~L~~n~l~~~~~~~~~-----~l~~L~~L~ 212 (704)
+++. ++..+..+++|+.|++++|.+++.. +..+..+++|++|++++|.+++.....+. ..++|+.|+
T Consensus 177 l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~ 256 (319)
T cd00116 177 IGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLS 256 (319)
T ss_pred CchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEE
Confidence 9842 3445666789999999999987432 34566778899999999988753222222 236777777
Q ss_pred ecCccCCCC----CCCcccCCccccEEEecCcccC
Q 005278 213 LGSNKLTST----MPSSFGSLEYVLYINLSANSLN 243 (704)
Q Consensus 213 l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~ 243 (704)
+++|.++.. +...+..+++|+++++++|.++
T Consensus 257 l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 257 LSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred ccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 777777521 1223334455555555555555
No 435
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.2e-20 Score=205.20 Aligned_cols=250 Identities=22% Similarity=0.232 Sum_probs=175.8
Q ss_pred CCCccccccccCceEEEEEEECCCCEEEEEEeeccch-hhhHHHHHHHHH--HHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLE-RASRSFDSECEI--LRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
++...+.+|.+.|=.|.+|+..+|. |+||++-++.. -.-+.|.++++- ...++|||++.+.-+.......|+|-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 4566688999999999999988777 89999876542 223344433333 4555899999988776667777888899
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecC-CCCCc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLG-EGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~-~~~~~ 571 (704)
..+ +|+|.+..+ ..+...+.+.|+.|+..|+..+ |+.+|+|||||.+|||++.=..+.|+||..-+... +.++.
T Consensus 103 vkh-nLyDRlSTR-PFL~~iEKkWiaFQLL~al~qc---H~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNP 177 (1431)
T KOG1240|consen 103 VKH-NLYDRLSTR-PFLVLIEKKWIAFQLLKALSQC---HKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNP 177 (1431)
T ss_pred Hhh-hhhhhhccc-hHHHHHHHHHHHHHHHHHHHHH---HHcCccccccccceEEEeeechhhhhcccccCCccCCCCCc
Confidence 876 999988754 3477778888999999999999 67899999999999999999999999997643221 11111
Q ss_pred ----ceeccccccccccCCcccCCC----------C-CCcccceeeHHHHHHHHhh-CCCCCCccccccccHHHHHHhhc
Q 005278 572 ----VIQTMTIATIGYMAPEYGSEG----------I-ISPKSDVYSYGILLMETFT-RKKPTNEIFIGEMSLKHWVKESL 635 (704)
Q Consensus 572 ----~~~~~~~gt~~y~aPE~~~~~----------~-~~~~~Dv~s~Gv~l~el~t-g~~p~~~~~~~~~~~~~~~~~~~ 635 (704)
........-..|+|||.+... . .+++-||||+||++.|+++ |++||.-. ++-.+-...
T Consensus 178 adf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~~~- 251 (1431)
T KOG1240|consen 178 ADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRSGN- 251 (1431)
T ss_pred ccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhccC-
Confidence 112222334569999964331 1 5678899999999999999 67777531 111111110
Q ss_pred CCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHH
Q 005278 636 PDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLK 690 (704)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~ 690 (704)
..+++..- ..-....+.+++..|++.||++|.+|++.++.-+
T Consensus 252 ------~~~~e~~L-------e~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 252 ------ADDPEQLL-------EKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred ------ccCHHHHH-------HhCcCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 00000000 0000125778999999999999999999998743
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=6.4e-19 Score=167.28 Aligned_cols=141 Identities=20% Similarity=0.175 Sum_probs=110.5
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccchh--------------------------hhHHHHHHHHHHHhcCCCCC
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--------------------------ASRSFDSECEILRSIRHRNL 473 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~ni 473 (704)
...||+|++|.||+|+..+|+.||||+++..... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999778999999998754210 01224678999999999987
Q ss_pred ceEEeeeeeCCeEEEEEeccCCCCHHHH-HhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 005278 474 IKIISNCCNIDFKALVLEFMPNGSLEKW-LYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM 552 (704)
Q Consensus 474 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~ 552 (704)
.....+.... .++||||++++++... +.. ..++......++.+++.++.++|+ ..+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~--~~givHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQ--EAGLVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHH--hCCEecCCCChhhEEEE-CC
Confidence 5544443332 4799999998865443 332 336778889999999999999963 27899999999999999 88
Q ss_pred cEEEeeeccceecCC
Q 005278 553 TAHVSDFGISKLLGE 567 (704)
Q Consensus 553 ~~kl~Dfgla~~~~~ 567 (704)
.++|+|||++..+..
T Consensus 155 ~~~liDFG~a~~~~~ 169 (190)
T cd05145 155 KPYIIDVSQAVELDH 169 (190)
T ss_pred CEEEEEcccceecCC
Confidence 999999999987643
No 437
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79 E-value=9.5e-19 Score=162.35 Aligned_cols=186 Identities=15% Similarity=0.090 Sum_probs=137.2
Q ss_pred CccccccccCceEEEEEEECCCCEEEEEEeeccchh----hhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEEec
Q 005278 418 NECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER----ASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~----~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
.+...+++|+||+||.+.- ++..++.+.+.....- ....+.+|+++++++. |+++.+++++ ...+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997764 6788887776544221 1235889999999995 5889999886 346899999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCC-CCCCeeeCCCCcEEEeeeccceecCCCCCc
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDL-KPNNILLDENMTAHVSDFGISKLLGEGDDS 571 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dl-k~~Nil~~~~~~~kl~Dfgla~~~~~~~~~ 571 (704)
+.|.+|.+.... ....++.++..+++++ |+.||+|||| ||.||+++.++.++|+|||+|.........
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~l---H~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQL---HRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHH---HHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 999998764321 1235778999999999 5678999999 799999999999999999999865432210
Q ss_pred ----c-------eeccccccccccCCcccC--CCCCCcccceeeHHHHHHHHhhCCCCCCc
Q 005278 572 ----V-------IQTMTIATIGYMAPEYGS--EGIISPKSDVYSYGILLMETFTRKKPTNE 619 (704)
Q Consensus 572 ----~-------~~~~~~gt~~y~aPE~~~--~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~ 619 (704)
. .......++.|++|+-.. ...--...+-++-|.-+|.++||+.|+-+
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~ 209 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE 209 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence 0 011224677788887422 12222456788899999999999988644
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.4e-19 Score=174.85 Aligned_cols=197 Identities=24% Similarity=0.250 Sum_probs=137.1
Q ss_pred CCCCCceEEeeeee---------------------------CCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHH
Q 005278 469 RHRNLIKIISNCCN---------------------------IDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDV 521 (704)
Q Consensus 469 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i 521 (704)
+|||||++.++|.+ +...|+||..+++ +|.+++..+. .+.....-++.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999987743 2356799998866 9999998654 3555666788999
Q ss_pred HHHHHHHHhcCCCCcEecCCCCCCeee--CCCC--cEEEeeeccceecCCCCC----cceeccccccccccCCcccCCCC
Q 005278 522 GLALEYLHHGHSTPMVHCDLKPNNILL--DENM--TAHVSDFGISKLLGEGDD----SVIQTMTIATIGYMAPEYGSEGI 593 (704)
Q Consensus 522 ~~~l~~Lh~~h~~~ivH~dlk~~Nil~--~~~~--~~kl~Dfgla~~~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~ 593 (704)
.+|+.|| |++||.|||+|++||++ |+|+ ...|+|||.+---....- .......-|.-.-||||+....+
T Consensus 351 LEav~hL---~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~P 427 (598)
T KOG4158|consen 351 LEAVTHL---HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVP 427 (598)
T ss_pred HHHHHHH---HHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCC
Confidence 9999999 56789999999999998 4444 467899997643211110 01111224677789999864322
Q ss_pred ------CCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHH
Q 005278 594 ------ISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHL 667 (704)
Q Consensus 594 ------~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 667 (704)
.-.|+|.|+.|.+.||+++...||....+...+...+- +.+....+..+++.+.++
T Consensus 428 Gp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq------------------e~qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 428 GPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ------------------ESQLPALPSRVPPVARQL 489 (598)
T ss_pred CCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhh------------------hhhCCCCcccCChHHHHH
Confidence 12389999999999999999999987322211111111 111223445667788999
Q ss_pred HhhhcCCCCCCCCCHHHHHHHH
Q 005278 668 ALDCCMESPEQRVSMKDAAAKL 689 (704)
Q Consensus 668 ~~~cl~~~P~~Rpt~~ev~~~L 689 (704)
+...++.||++|++..-....|
T Consensus 490 V~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHhcCCccccCCccHHHhHH
Confidence 9999999999999875544443
No 439
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=1.3e-18 Score=193.76 Aligned_cols=198 Identities=22% Similarity=0.223 Sum_probs=160.7
Q ss_pred HHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcC---CCCCceEEeeeeeCCeEE
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIR---HRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~ 487 (704)
+...+.|.+.+.||+|+||+||+|...+|+.||+|+=+..... +|.--.+++.+|+ -+.|+.+..++...+..+
T Consensus 694 ~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W---EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~ 770 (974)
T KOG1166|consen 694 EVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW---EFYICLQVMERLKPQMLPSIMHISSAHVFQNASV 770 (974)
T ss_pred eecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCce---eeeehHHHHHhhchhhhcchHHHHHHHccCCcce
Confidence 3445678888999999999999999888999999986544321 1222234444444 344556666666677788
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeC-------CCCcEEEeeec
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLD-------ENMTAHVSDFG 560 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~-------~~~~~kl~Dfg 560 (704)
+|+||.+.|+|.+++. ....++|.-++-+..|++..+++| |..+||||||||+|+++. ....++|+|||
T Consensus 771 lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~l---H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG 846 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHL---HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFG 846 (974)
T ss_pred eeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHH---HhcceecccCCcceeEeecccCCCCcccceEEEecc
Confidence 9999999999999998 444589999999999999999999 567899999999999994 24468999999
Q ss_pred cceecCCCCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCC
Q 005278 561 ISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK 615 (704)
Q Consensus 561 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~ 615 (704)
.+..+.-..........++|-++-.+|...+..++.++|.|.++.+++-|+.|+.
T Consensus 847 ~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 847 RSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred cceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 9998866555556667789999999999999999999999999999999999875
No 440
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=1.1e-18 Score=171.15 Aligned_cols=229 Identities=22% Similarity=0.259 Sum_probs=145.5
Q ss_pred CccccccccCceEEEEEEEC-CCCEEEEEEeeccc---hhhhHHHHHHHHHHHhcC----------CCCCceEEeeee--
Q 005278 418 NECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQL---ERASRSFDSECEILRSIR----------HRNLIKIISNCC-- 481 (704)
Q Consensus 418 ~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~----------h~niv~l~~~~~-- 481 (704)
...+.||.|+++.||.++.. +++++|||++.... ....+.+++|.-....+. |-.++-.++...
T Consensus 15 ~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~ 94 (288)
T PF14531_consen 15 VRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIP 94 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEET
T ss_pred EEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEc
Confidence 34578999999999999976 58999999986443 234456666665554432 212222222211
Q ss_pred -------eC---C-----eEEEEEeccCCCCHHHHHh---hCC---CccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecC
Q 005278 482 -------NI---D-----FKALVLEFMPNGSLEKWLY---SHN---YFLGILERLNIMIDVGLALEYLHHGHSTPMVHCD 540 (704)
Q Consensus 482 -------~~---~-----~~~lv~e~~~~gsL~~~l~---~~~---~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~d 540 (704)
.. . ..+++|+-+ .++|.+++. ... .......+..+..|+.+.+++|| ..|++|+|
T Consensus 95 ~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVHgd 170 (288)
T PF14531_consen 95 GKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVHGD 170 (288)
T ss_dssp TS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEEST
T ss_pred CCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEecc
Confidence 11 1 235778877 569988865 221 12344556677789999999995 57899999
Q ss_pred CCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCC--------CCCCcccceeeHHHHHHHHhh
Q 005278 541 LKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSE--------GIISPKSDVYSYGILLMETFT 612 (704)
Q Consensus 541 lk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~Gv~l~el~t 612 (704)
|+|+|++++.+|.+.|+||+.....+.. ......+..|.+||.... -.++.+.|.|++|+++|.|++
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 9999999999999999999988764321 111345678999996533 257889999999999999999
Q ss_pred CCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCC
Q 005278 613 RKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQR 679 (704)
Q Consensus 613 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~R 679 (704)
|+.||+......... ..+..+.+.+..+..+|..+++.+|.+|
T Consensus 246 ~~lPf~~~~~~~~~~------------------------~~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPE------------------------WDFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSG------------------------GGGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCcccccc------------------------ccchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999998632211100 0122333567788999999999999988
No 441
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.77 E-value=5.6e-20 Score=190.92 Aligned_cols=225 Identities=24% Similarity=0.267 Sum_probs=176.2
Q ss_pred cccccCceEEEEEE----ECCCCEEEEEEeeccch--hhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEEEEeccC
Q 005278 422 LLGTGSFGSVYKGT----LFDGTNVAIKVFNLQLE--RASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKALVLEFMP 494 (704)
Q Consensus 422 ~ig~G~~g~V~~~~----~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 494 (704)
.+|+|+||.|+.++ ...|..+|+|+.++... ........|..++..++ ||.++++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 36999999999764 23477889998865531 12225667888889887 9999999999999999999999999
Q ss_pred CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCccee
Q 005278 495 NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQ 574 (704)
Q Consensus 495 ~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~ 574 (704)
+|++...+..... +...........++-+++++ |+.+|+|||+|++||+++.+|++++.|||+++..-+...
T Consensus 81 gg~lft~l~~~~~-f~~~~~~~~~aelaLald~l---h~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~---- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM-FDELDVAFYLAELALALDHL---HKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI---- 152 (612)
T ss_pred cchhhhccccCCc-hHHHHHHHHHHHHHHHHhhc---chhHHHHhcccccceeecccCccccCCchhhhHhHhhhh----
Confidence 9999988876544 45555566667778888888 789999999999999999999999999999987644322
Q ss_pred ccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhh
Q 005278 575 TMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAF 654 (704)
Q Consensus 575 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 654 (704)
.+||..|||||++. .....+|-||||++++||+||..||... ...- +.. ...
T Consensus 153 --~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~------~~~~----------------Il~--~~~ 204 (612)
T KOG0603|consen 153 --ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD------TMKR----------------ILK--AEL 204 (612)
T ss_pred --cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH------HHHH----------------Hhh--hcc
Confidence 27999999999988 4567899999999999999999999760 0010 000 123
Q ss_pred hhhHHHHHHHHHHHhhhcCCCCCCCCCH
Q 005278 655 SVKIDCLLSIMHLALDCCMESPEQRVSM 682 (704)
Q Consensus 655 ~~~~~~~~~l~~l~~~cl~~~P~~Rpt~ 682 (704)
..+......+.+++..++..+|..|...
T Consensus 205 ~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 205 EMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 3444566677788888899999999865
No 442
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=8.8e-21 Score=163.76 Aligned_cols=165 Identities=27% Similarity=0.462 Sum_probs=106.2
Q ss_pred hhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCC
Q 005278 130 IGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLR 209 (704)
Q Consensus 130 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 209 (704)
+.++++++.|.||+|.++ .+|..+..+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 344555666666777666 45556666666777777777766 56666666666677766666666 6666666666666
Q ss_pred EEEecCccCC-CCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCc
Q 005278 210 RLHLGSNKLT-STMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADN 288 (704)
Q Consensus 210 ~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n 288 (704)
.|+|.+|++. ..+|..|..++.|+.|+|++|-+. .+|..++++++|+.|.+..|.+- ..|..++.+..|+.|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 6666666664 245566666666666666666665 56666666666666666666666 56666666666666666666
Q ss_pred eeeccCCccccc
Q 005278 289 QFQGPVPKSFGS 300 (704)
Q Consensus 289 ~l~~~~p~~~~~ 300 (704)
+++ .+|..+++
T Consensus 184 rl~-vlppel~~ 194 (264)
T KOG0617|consen 184 RLT-VLPPELAN 194 (264)
T ss_pred eee-ecChhhhh
Confidence 666 45554443
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.6e-17 Score=158.00 Aligned_cols=137 Identities=18% Similarity=0.218 Sum_probs=104.8
Q ss_pred CCccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-----CCCCCceEEeeeeeCC---eEE-
Q 005278 417 FNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI-----RHRNLIKIISNCCNID---FKA- 487 (704)
Q Consensus 417 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~~~- 487 (704)
+.....||+|+||.||. ..+....+||++........+.+.+|+.+++.+ .||||++++|++.+.. ..+
T Consensus 4 L~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 4 LSEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred cCCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 34457899999999996 333333479988765444557799999999999 5799999999998863 333
Q ss_pred EEEec--cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHH-HHHHhcCCCCcEecCCCCCCeeeCC----CCcEEEeeec
Q 005278 488 LVLEF--MPNGSLEKWLYSHNYFLGILERLNIMIDVGLAL-EYLHHGHSTPMVHCDLKPNNILLDE----NMTAHVSDFG 560 (704)
Q Consensus 488 lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~Lh~~h~~~ivH~dlk~~Nil~~~----~~~~kl~Dfg 560 (704)
+|+|| +++|+|.+++.+.. +++. ..++.++..++ +|| |+.+|+||||||+||+++. ++.++|+||+
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yL---h~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYL---LDNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EEecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHH---HHCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 78999 55899999997642 4444 35577777777 999 4577999999999999974 3479999954
Q ss_pred cc
Q 005278 561 IS 562 (704)
Q Consensus 561 la 562 (704)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 33
No 444
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.73 E-value=4.8e-20 Score=159.21 Aligned_cols=162 Identities=35% Similarity=0.568 Sum_probs=151.1
Q ss_pred hcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCcccc
Q 005278 154 VGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVL 233 (704)
Q Consensus 154 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 233 (704)
+.+++++..|.|+.|+++ .+|..++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.+|.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 446788899999999999 78889999999999999999999 88899999999999999999998 8999999999999
Q ss_pred EEEecCcccC-CCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEeccc
Q 005278 234 YINLSANSLN-GSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRN 312 (704)
Q Consensus 234 ~L~l~~N~l~-~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N 312 (704)
.|||++|++. ..+|..|..+..|+.|+|++|.+. .+|..++.+++|+.|.+..|.+- .+|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 9999999987 578999999999999999999998 89999999999999999999998 89999999999999999999
Q ss_pred CCCCCCCC
Q 005278 313 NLSGEIPK 320 (704)
Q Consensus 313 ~l~~~~p~ 320 (704)
+++-..|+
T Consensus 184 rl~vlppe 191 (264)
T KOG0617|consen 184 RLTVLPPE 191 (264)
T ss_pred eeeecChh
Confidence 99854443
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.70 E-value=7.3e-17 Score=157.67 Aligned_cols=143 Identities=20% Similarity=0.139 Sum_probs=110.4
Q ss_pred CCCCccccccccCceEEEEEE--ECCCCEEEEEEeeccchh------------------------hhHHHHHHHHHHHhc
Q 005278 415 NGFNECNLLGTGSFGSVYKGT--LFDGTNVAIKVFNLQLER------------------------ASRSFDSECEILRSI 468 (704)
Q Consensus 415 ~~~~~~~~ig~G~~g~V~~~~--~~~~~~vavK~~~~~~~~------------------------~~~~~~~e~~~l~~l 468 (704)
..|.+.+.||+|+||.||+|. ..+|+.||+|+++..... ....+..|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357778899999999999998 568999999998743210 112357899999999
Q ss_pred CCCC--CceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCC-cEecCCCCCC
Q 005278 469 RHRN--LIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTP-MVHCDLKPNN 545 (704)
Q Consensus 469 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~-ivH~dlk~~N 545 (704)
.+.. +.+++++ . ..++||||++++++..+.... ..........++.|++.++++| |+.+ |+|||+||+|
T Consensus 108 ~~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~L---H~~g~iiH~Dikp~N 179 (237)
T smart00090 108 YEAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKL---YKEGELVHGDLSEYN 179 (237)
T ss_pred HhcCCCCCeeeEe---c-CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHH---HhcCCEEeCCCChhh
Confidence 7533 3444443 2 347999999998887655332 2355566788999999999999 5677 9999999999
Q ss_pred eeeCCCCcEEEeeeccceecC
Q 005278 546 ILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 546 il~~~~~~~kl~Dfgla~~~~ 566 (704)
|+++ ++.++++|||.+....
T Consensus 180 Ili~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EEEE-CCCEEEEEChhhhccC
Confidence 9999 8899999999988643
No 446
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=1.4e-16 Score=154.86 Aligned_cols=134 Identities=21% Similarity=0.328 Sum_probs=112.6
Q ss_pred ccccccCceEEEEEEECCCCEEEEEEeeccch--------hhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLE--------RASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~--------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
+.||+|++|.||+|.. +|..+++|+...... .....+.+|++.+..++|+++.....++......++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 678899997653221 1234578899999999999988877777777788999999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
+++++|.+++.... + .+..++.+++.++.++ |+.+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~l---H~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKL---HSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHH---HhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999986542 2 7888999999999999 557899999999999999 78999999998864
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=2.4e-16 Score=151.01 Aligned_cols=142 Identities=19% Similarity=0.170 Sum_probs=110.1
Q ss_pred HHHhCCCCccccccccCceEEEEEEECCCCEEEEEEeeccch----------------------hhhHHHHHHHHHHHhc
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLE----------------------RASRSFDSECEILRSI 468 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l 468 (704)
.....-|...+.||+|+||.||+|...+|+.||||++..... .....+..|...+..+
T Consensus 11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 90 (198)
T cd05144 11 VKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKAL 90 (198)
T ss_pred HHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHH
Confidence 333344777899999999999999988899999998764320 0112367789999999
Q ss_pred CCC--CCceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCe
Q 005278 469 RHR--NLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNI 546 (704)
Q Consensus 469 ~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Ni 546 (704)
.|+ .+...++. ...++||||+++++|.+.... .....++.+++.++.++| +.+|+||||+|.||
T Consensus 91 ~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl~p~Ni 156 (198)
T cd05144 91 YEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY---KHGIIHGDLSEFNI 156 (198)
T ss_pred HHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH---HCCCCcCCCCcccE
Confidence 877 44555442 345899999999999775431 234578889999999995 47899999999999
Q ss_pred eeCCCCcEEEeeeccceecC
Q 005278 547 LLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 547 l~~~~~~~kl~Dfgla~~~~ 566 (704)
++++++.++|+|||.+....
T Consensus 157 ll~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 157 LVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred EEcCCCcEEEEECCccccCC
Confidence 99999999999999997543
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=3.4e-16 Score=173.02 Aligned_cols=137 Identities=20% Similarity=0.283 Sum_probs=110.7
Q ss_pred hCCCCccccccccCceEEEEEEECCCCEEEEEEeeccc--------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCe
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDF 485 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 485 (704)
...|...+.||+|+||+||+|.+.+. .+++|+..... ....+.+.+|+++++.++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34556678999999999999986544 34444322111 1123568899999999999999988888777777
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
.++||||+++++|.+++. ....++.+++.++.|| |+.+++|||+||+||++ .++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~l---H~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKL---HKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHH---HhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999875 3467899999999999 55789999999999999 678999999999975
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=3.5e-16 Score=150.39 Aligned_cols=130 Identities=22% Similarity=0.341 Sum_probs=106.1
Q ss_pred cccccCceEEEEEEECCCCEEEEEEeeccc--------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEecc
Q 005278 422 LLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFM 493 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 493 (704)
.||+|+||.||+|.+ +|..|++|...... ....+.+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999984 57889999864321 112356788999999999887665555555666778999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
++++|.+++..... .++.+++.++.++ |+.+++|||++|.||+++ ++.++++|||++..
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~l---H~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKL---HKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHH---HHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998764321 7899999999999 568999999999999999 88999999998864
No 450
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.65 E-value=2.7e-17 Score=167.82 Aligned_cols=122 Identities=26% Similarity=0.475 Sum_probs=107.0
Q ss_pred eEEEEEeccCCCCHHHHHh--hCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccc
Q 005278 485 FKALVLEFMPNGSLEKWLY--SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGIS 562 (704)
Q Consensus 485 ~~~lv~e~~~~gsL~~~l~--~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla 562 (704)
+.++.|+++.-.+|.+|+. ......++.....++.|++.|++| ++.+|+|+||.||+...+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 5689999999999999996 334567888899999999999998 67999999999999999999999999999
Q ss_pred eecCCCC----CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh
Q 005278 563 KLLGEGD----DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612 (704)
Q Consensus 563 ~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t 612 (704)
....... ....++...||..||+||.+.+..|+.|+||||+|++++|+++
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 8775443 1224455689999999999999999999999999999999998
No 451
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=1.6e-16 Score=173.41 Aligned_cols=212 Identities=24% Similarity=0.241 Sum_probs=142.1
Q ss_pred hCCCCccccccccCceEEEEEEEC-CCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+|+.++.|..|+||.||..++. ..+.+|+|+ .++ ..+.+- ++.....|.+ |
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq-----~lilRn--ilt~a~npfv---------------v--- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQ-----NLILRN--ILTFAGNPFV---------------V--- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-ccc-----chhhhc--cccccCCcce---------------e---
Confidence 368999999999999999999865 467788843 221 111110 1111222222 2
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCC--
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDD-- 570 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~-- 570 (704)
|+....++..+. ++.. .+.+++|| |+.+|+|||+||+|.+|+.-|++|++|||+++.......
T Consensus 136 ---gDc~tllk~~g~-lPvd--------mvla~Eyl---h~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP-LPVD--------MVLAVEYL---HSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred ---chhhhhcccCCC-Ccch--------hhHHhHhh---ccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 455555543322 2222 27789999 779999999999999999999999999999876432110
Q ss_pred ----------cc-eeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCc
Q 005278 571 ----------SV-IQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 571 ----------~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
.. .....+||+.|+|||++....|+..+|-|++|+++||.+.|+.||.+.... .-+.+.+.. .
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe-elfg~visd----~- 274 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-ELFGQVISD----D- 274 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH-HHHhhhhhh----h-
Confidence 00 112347999999999999999999999999999999999999999773221 111111111 0
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
..+. ...+..+.++.+++.+.++.+|..|.-..
T Consensus 275 -------i~wp----E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 275 -------IEWP----EEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred -------cccc----ccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 0000 01112345678899999999999997444
No 452
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=6.3e-15 Score=135.00 Aligned_cols=135 Identities=21% Similarity=0.264 Sum_probs=115.4
Q ss_pred ccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCC--CCCceEEeeeeeCCeEEEEEeccCCC
Q 005278 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRH--RNLIKIISNCCNIDFKALVLEFMPNG 496 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 496 (704)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| ..+.+++++....+..++++||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35689999999999999754 7899999865432 4678999999999976 58999999888888899999999988
Q ss_pred CHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 497 SLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 497 sL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
.+..+ +......++.+++++++++|..+..+++|+|++|.||+++..+.+++.|||.+..
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77654 4566778899999999999877667899999999999999989999999998874
No 453
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=7.9e-17 Score=176.73 Aligned_cols=256 Identities=22% Similarity=0.249 Sum_probs=195.8
Q ss_pred hCCCCccccccccCceEEEEEEECC--CCEEEEEEeeccc--hhhhHHHHHHHHHHHhcC-CCCCceEEeeeeeCCeEEE
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD--GTNVAIKVFNLQL--ERASRSFDSECEILRSIR-HRNLIKIISNCCNIDFKAL 488 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 488 (704)
...|...+.||+|+|+.|-...... ...+|+|.+.... ....+....|..+-+.+. |+|++++++.....+..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 3467777789999999998876433 4455666554332 223344556777777776 9999999999999999999
Q ss_pred EEeccCCCCHHHHH-hhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC-cEEEeeeccceecC
Q 005278 489 VLEFMPNGSLEKWL-YSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM-TAHVSDFGISKLLG 566 (704)
Q Consensus 489 v~e~~~~gsL~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~-~~kl~Dfgla~~~~ 566 (704)
+++|..+|++.+.+ .......+......+..|+..++.|+|. ..+++|+|+||+|.+++..+ ..++.|||+|..+.
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 99999999999988 5444356777788899999999999941 78899999999999999999 99999999999886
Q ss_pred C-CCCcceeccccc-cccccCCcccCC-CCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhc
Q 005278 567 E-GDDSVIQTMTIA-TIGYMAPEYGSE-GIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVV 643 (704)
Q Consensus 567 ~-~~~~~~~~~~~g-t~~y~aPE~~~~-~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (704)
. ...........| ++.|+|||...+ ....+..|+||.|+++.-+++|..|++........+..|........
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----- 251 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT----- 251 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc-----
Confidence 6 344444445578 999999998877 45677899999999999999999999887666666666654321100
Q ss_pred cccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHH
Q 005278 644 DANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAA 686 (704)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~ 686 (704)
............++..+++..+|+.|.+.+++.
T Consensus 252 ----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 ----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ----------cCccccCChhhhhcccccccCCchhcccccccc
Confidence 001112234456788889989999999988873
No 454
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.57 E-value=1.5e-14 Score=137.57 Aligned_cols=137 Identities=22% Similarity=0.237 Sum_probs=97.5
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccchh--hhHH----------------------HHHHHHHHHhcCCCC--C
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER--ASRS----------------------FDSECEILRSIRHRN--L 473 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 473 (704)
.+.||+|+||+||+|...+++.||||++...... .... ...|.+.+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999778999999998653211 1111 135666666664433 4
Q ss_pred ceEEeeeeeCCeEEEEEeccCCCCHHHH-HhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC
Q 005278 474 IKIISNCCNIDFKALVLEFMPNGSLEKW-LYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM 552 (704)
Q Consensus 474 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~ 552 (704)
.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. +.+|+|||+||+||+++ ++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh~--~~~ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLYR--EAGLVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHhh--ccCcCcCCCChhhEEEE-CC
Confidence 445543 235899999998543221 11111 01 5567899999999999953 27899999999999999 89
Q ss_pred cEEEeeeccceecC
Q 005278 553 TAHVSDFGISKLLG 566 (704)
Q Consensus 553 ~~kl~Dfgla~~~~ 566 (704)
.++++|||.+....
T Consensus 152 ~~~liDfg~a~~~~ 165 (187)
T cd05119 152 KVYIIDVPQAVEID 165 (187)
T ss_pred cEEEEECccccccc
Confidence 99999999997653
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.52 E-value=1.1e-13 Score=135.61 Aligned_cols=135 Identities=19% Similarity=0.203 Sum_probs=103.9
Q ss_pred cccc-ccCceEEEEEEECCCCEEEEEEeeccc-------------hhhhHHHHHHHHHHHhcCCCCC--ceEEeeeeeC-
Q 005278 421 NLLG-TGSFGSVYKGTLFDGTNVAIKVFNLQL-------------ERASRSFDSECEILRSIRHRNL--IKIISNCCNI- 483 (704)
Q Consensus 421 ~~ig-~G~~g~V~~~~~~~~~~vavK~~~~~~-------------~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~- 483 (704)
..|| .||.|+||.+... +..++||.+.... ......+.+|++++.+++|+++ ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8999999999864 7789999885321 1123567889999999998875 6777764332
Q ss_pred C---eEEEEEeccCC-CCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 484 D---FKALVLEFMPN-GSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 484 ~---~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
. ..++||||+++ .+|.+++.... ++.. .+.+++.++.+| |+.||+||||||.|||++.++.++|+||
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~----~~~~i~~~l~~l---H~~GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEAP--LSEE----QWQAIGQLIARF---HDAGVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcCC--CCHH----HHHHHHHHHHHH---HHCCCCCCCCCchhEEEcCCCCEEEEEC
Confidence 2 23599999997 69998886532 3433 356889999999 5689999999999999999999999999
Q ss_pred ccceec
Q 005278 560 GISKLL 565 (704)
Q Consensus 560 gla~~~ 565 (704)
|.+...
T Consensus 187 g~~~~~ 192 (239)
T PRK01723 187 DRGELR 192 (239)
T ss_pred CCcccC
Confidence 988753
No 456
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.52 E-value=4.6e-16 Score=158.84 Aligned_cols=177 Identities=32% Similarity=0.541 Sum_probs=150.1
Q ss_pred cCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEE
Q 005278 132 NLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRL 211 (704)
Q Consensus 132 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 211 (704)
.+..-...||+.|++. .+|..+..+-.|+.+.|+.|.|. .+|..++.+..|.+|||+.|+++ .+|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445566888889888 78888888888888999999988 78888999999999999999998 7777777766 8899
Q ss_pred EecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceee
Q 005278 212 HLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQ 291 (704)
Q Consensus 212 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 291 (704)
.+++|+++ .+|..++.+..|..|+.+.|.+. .+|..++.+.+|+.|.+..|++. .+|..+..++ |..||++.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee
Confidence 99999988 78888888888999999999988 78888888889999999999998 7777777554 888999999998
Q ss_pred ccCCcccccccccceEEecccCCCCC
Q 005278 292 GPVPKSFGSLISLESLDLSRNNLSGE 317 (704)
Q Consensus 292 ~~~p~~~~~l~~L~~L~l~~N~l~~~ 317 (704)
.+|-.|..|..|++|-|.+||+..+
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCC
Confidence 8888999999999999999998743
No 457
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.50 E-value=1.1e-15 Score=147.67 Aligned_cols=247 Identities=20% Similarity=0.238 Sum_probs=137.0
Q ss_pred cccCCCCCCEEeccCccccc----cCchhhcCCCCCCEEecccc---cCCCcccchhhcccccCCCCCCCcEEEccCCCC
Q 005278 25 SITNASKLIMLDLSSNSFSG----LIPNTFGNLGSLQVLSLAYN---YLMTESSAAKWNFLSSLTNCRNLTVLGLASNPL 97 (704)
Q Consensus 25 ~~~~l~~L~~L~L~~n~i~~----~~~~~~~~l~~L~~L~L~~n---~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i 97 (704)
.+..+.++++|+|++|.+.. .+...+.+.++|+.-++|+= +.......+...+.+.+..+++|++||||.|-+
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~ 104 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAF 104 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeecccccc
Confidence 34557778888888888873 34445677778888877763 222222233333445566777888888888888
Q ss_pred cccCChhhhhccc---ccceEEecCCcccccCCh-------------hhhcCCCCCEEEccCCcCccc----cChhhcCC
Q 005278 98 RGILPPLIGNFSA---SLQEFYAYGCKLRGNIPQ-------------EIGNLSGMIVFDLNGCDLNGT----IPTAVGRL 157 (704)
Q Consensus 98 ~~~~~~~~~~~~~---~L~~L~l~~n~l~~~~~~-------------~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l 157 (704)
.-..+..|..+.+ +|++|+|.+|++...--. ..++-+.|+++..++|++... +...|...
T Consensus 105 G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~ 184 (382)
T KOG1909|consen 105 GPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSH 184 (382)
T ss_pred CccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhc
Confidence 7666666655433 466666666666521111 122334555555555555422 22234444
Q ss_pred CCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCC----CCCCcccCCcccc
Q 005278 158 RRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTS----TMPSSFGSLEYVL 233 (704)
Q Consensus 158 ~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~ 233 (704)
+.|+.+.+++|.|....- ..+...+..+++|+.|+|.+|.++. .+...++.+++|+
T Consensus 185 ~~leevr~~qN~I~~eG~--------------------~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~ 244 (382)
T KOG1909|consen 185 PTLEEVRLSQNGIRPEGV--------------------TALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLR 244 (382)
T ss_pred cccceEEEecccccCchh--------------------HHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchhe
Confidence 555555555555542111 0111233444444444444444442 1223444455555
Q ss_pred EEEecCcccCCCCCcccc-----cCcCCcEEEeecCccCC----CCCCCcCCCCCcceeeccCceee
Q 005278 234 YINLSANSLNGSLPSNIQ-----NLKVLTNLDLSRNQLSG----DIPTTIGGLENLETLSLADNQFQ 291 (704)
Q Consensus 234 ~L~l~~N~l~~~~~~~~~-----~l~~L~~L~l~~n~l~~----~~~~~~~~l~~L~~L~L~~n~l~ 291 (704)
.|++++|.+......+|. ..|+|+.|.+.+|.++. .+...+...+.|..|+|++|.+.
T Consensus 245 El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 245 ELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred eecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 555555555544333331 35677788888887764 22334556788888888888884
No 458
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.49 E-value=1e-15 Score=147.92 Aligned_cols=247 Identities=19% Similarity=0.232 Sum_probs=185.3
Q ss_pred hhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCC---CCcccCChhhhhcccccceEEecCCcccc
Q 005278 48 NTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASN---PLRGILPPLIGNFSASLQEFYAYGCKLRG 124 (704)
Q Consensus 48 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n---~i~~~~~~~~~~~~~~L~~L~l~~n~l~~ 124 (704)
..+..+..+++|+||+|.+......+ +...+.+.++|+..++|+- +....+|..+..+.
T Consensus 24 ~~~~~~~s~~~l~lsgnt~G~EAa~~---i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~--------------- 85 (382)
T KOG1909|consen 24 EELEPMDSLTKLDLSGNTFGTEAARA---IAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLS--------------- 85 (382)
T ss_pred HHhcccCceEEEeccCCchhHHHHHH---HHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHH---------------
Confidence 34667888999999999887766554 5666778888999888863 44445555555443
Q ss_pred cCChhhhcCCCCCEEEccCCcCccccCh----hhcCCCCcCeeeccCcccCCCC-------------CccccCCCCCCEE
Q 005278 125 NIPQEIGNLSGMIVFDLNGCDLNGTIPT----AVGRLRRLQGLYLHGNKLQGSI-------------PYDLCHLEGLSEL 187 (704)
Q Consensus 125 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~L~~n~l~~~~-------------~~~l~~l~~L~~L 187 (704)
.++..+++|++||||+|.+....+. -+.+..+|++|+|.+|.+...- .+....-+.|+.+
T Consensus 86 ---~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~ 162 (382)
T KOG1909|consen 86 ---KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVF 162 (382)
T ss_pred ---HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEE
Confidence 4667778899999999988744433 3456788999999999886221 1223445789999
Q ss_pred EcCCCcCCccC----CccccCcCCCCEEEecCccCCCC----CCCcccCCccccEEEecCcccCC----CCCcccccCcC
Q 005278 188 NLNGNKLCGHV----PPCLASLTSLRRLHLGSNKLTST----MPSSFGSLEYVLYINLSANSLNG----SLPSNIQNLKV 255 (704)
Q Consensus 188 ~L~~n~l~~~~----~~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~l~~N~l~~----~~~~~~~~l~~ 255 (704)
...+|++.... ...|...+.|+.+.+..|.|... +...|..+++|+.|||.+|.++. .+...++.+++
T Consensus 163 i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~ 242 (382)
T KOG1909|consen 163 ICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPH 242 (382)
T ss_pred EeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccch
Confidence 99999998432 34566778999999999998732 23457789999999999999984 34556778899
Q ss_pred CcEEEeecCccCCCCCCCc-----CCCCCcceeeccCceeec----cCCcccccccccceEEecccCCC
Q 005278 256 LTNLDLSRNQLSGDIPTTI-----GGLENLETLSLADNQFQG----PVPKSFGSLISLESLDLSRNNLS 315 (704)
Q Consensus 256 L~~L~l~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~l~~N~l~ 315 (704)
|+.|++++|.+......+| ...++|+.|.|.+|.++. .+-..+...+.|..|+|++|.+.
T Consensus 243 L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 243 LRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred heeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9999999999986555444 347899999999999984 33344567899999999999995
No 459
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=1.2e-13 Score=154.26 Aligned_cols=112 Identities=36% Similarity=0.700 Sum_probs=80.9
Q ss_pred ccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecc
Q 005278 232 VLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSR 311 (704)
Q Consensus 232 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~ 311 (704)
++.|+|++|.+.+.+|..++.+++|+.|+|++|++.|.+|..++.+++|+.|+|++|+++|.+|..++++++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 66777777777777777777777777777777777777777777777777777777777777777777777777777777
Q ss_pred cCCCCCCCCCccc-------ccccCcccccCCCccCCCccc
Q 005278 312 NNLSGEIPKNFSA-------QSFLSNYALCGPARLQVPSCR 345 (704)
Q Consensus 312 N~l~~~~p~~~~~-------~~~l~~~~l~g~~~~~~~~c~ 345 (704)
|+++|.+|..+.. ..+..|..+||.|. .+.|.
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~ 538 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACG 538 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCccccCCCC--CCCCc
Confidence 7777777764432 22445666777653 34564
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=1.1e-13 Score=148.04 Aligned_cols=198 Identities=29% Similarity=0.432 Sum_probs=109.6
Q ss_pred EEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCC-CCcEEEccCCCCcccCChhhhhccccc
Q 005278 34 MLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCR-NLTVLGLASNPLRGILPPLIGNFSASL 112 (704)
Q Consensus 34 ~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~-~L~~L~L~~n~i~~~~~~~~~~~~~~L 112 (704)
.|++..|.+. .....+..++.++.|++.+|.++.++.. ...+. +|++|++++|++... |..+..+ +.|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~~i~~~--------~~~~~~nL~~L~l~~N~i~~l-~~~~~~l-~~L 165 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNITDIPPL--------IGLLKSNLKELDLSDNKIESL-PSPLRNL-PNL 165 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccccCccc--------cccchhhcccccccccchhhh-hhhhhcc-ccc
Confidence 5777777774 2334456667788888888888776543 33443 778888888877732 2222222 245
Q ss_pred ceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCC
Q 005278 113 QEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGN 192 (704)
Q Consensus 113 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 192 (704)
+.|++++|++. .++...+.++.|+.|++++|.+. .+|........|++|++++|.+. ..+..+.++.++..|.+.+|
T Consensus 166 ~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n 242 (394)
T COG4886 166 KNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNN 242 (394)
T ss_pred cccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCc
Confidence 55555555554 33333335555666666666655 44444444445666666666433 34445555555555555556
Q ss_pred cCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCc
Q 005278 193 KLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPS 248 (704)
Q Consensus 193 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 248 (704)
++. ..+..+..+++++.|++++|.++.... ++.+.+++.|++++|.+....+.
T Consensus 243 ~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 243 KLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred eee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 555 224445555556666666665553222 55555555555555555544333
No 461
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=2.2e-15 Score=153.93 Aligned_cols=200 Identities=29% Similarity=0.409 Sum_probs=110.7
Q ss_pred EEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCC
Q 005278 58 VLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMI 137 (704)
Q Consensus 58 ~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 137 (704)
.|.|++-++...+.++ .-..+.--...||+.|++. ++|..++.+ ..|+
T Consensus 54 ~l~Ls~rrlk~fpr~a------~~~~ltdt~~aDlsrNR~~-elp~~~~~f-------------------------~~Le 101 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGA------ASYDLTDTVFADLSRNRFS-ELPEEACAF-------------------------VSLE 101 (722)
T ss_pred ccccccchhhcCCCcc------ccccccchhhhhccccccc-cCchHHHHH-------------------------HHHH
Confidence 4556666665555443 1133444556677777776 445554444 3444
Q ss_pred EEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCcc
Q 005278 138 VFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNK 217 (704)
Q Consensus 138 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 217 (704)
.+.|..|.+. .+|..+.++..|.+|||+.|+++ .+|..++.++ |+.|-+++|+++ .+|..++.++.|..|+.+.|.
T Consensus 102 ~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~ne 177 (722)
T KOG0532|consen 102 SLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNE 177 (722)
T ss_pred HHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhh
Confidence 4445555554 45555555555555555555555 4555555544 555555555555 455555555555555555555
Q ss_pred CCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcc
Q 005278 218 LTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKS 297 (704)
Q Consensus 218 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~ 297 (704)
+. .+|..++.+.+|+.|++..|++. .+|..+..++ |..||+|.|+++ .+|..|..|..|++|-|.+|.+. ..|..
T Consensus 178 i~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAq 252 (722)
T KOG0532|consen 178 IQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQ 252 (722)
T ss_pred hh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHH
Confidence 55 45555555555555555555555 3444444444 666666666666 56666666666666666666665 44444
Q ss_pred c
Q 005278 298 F 298 (704)
Q Consensus 298 ~ 298 (704)
+
T Consensus 253 I 253 (722)
T KOG0532|consen 253 I 253 (722)
T ss_pred H
Confidence 4
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.43 E-value=6.2e-13 Score=141.84 Aligned_cols=145 Identities=21% Similarity=0.282 Sum_probs=100.7
Q ss_pred CCCccccccccCceEEEEEEECCCCEEEEEEeeccchhh----------------------------------------h
Q 005278 416 GFNECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERA----------------------------------------S 455 (704)
Q Consensus 416 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~----------------------------------------~ 455 (704)
.|+ .+.||.|++|.||+|++.+|+.||||+.+...... +
T Consensus 119 ~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~E 197 (437)
T TIGR01982 119 EFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRE 197 (437)
T ss_pred hCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHH
Confidence 444 36899999999999999999999999986432110 0
Q ss_pred HHHHHHHHHHHhcC----CCCCceEEeeee-eCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHH-HHHHH
Q 005278 456 RSFDSECEILRSIR----HRNLIKIISNCC-NIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLA-LEYLH 529 (704)
Q Consensus 456 ~~~~~e~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~-l~~Lh 529 (704)
-.|..|.+.+.+++ |.+-+.+-..+. .....++||||++|+++.++........ .+..++..++.+ +..+
T Consensus 198 ldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql- 273 (437)
T TIGR01982 198 LDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQV- 273 (437)
T ss_pred HCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHH-
Confidence 02445666565552 333333333332 2345689999999999988765322112 234566665553 4555
Q ss_pred hcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 530 HGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 530 ~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
|..|++|+|++|.||+++.++.++++|||++..+.+
T Consensus 274 --~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 274 --LRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred --HhCCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 568899999999999999999999999999987653
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.41 E-value=3.2e-13 Score=129.48 Aligned_cols=202 Identities=20% Similarity=0.258 Sum_probs=139.4
Q ss_pred HHHHhcCCCCCceEEeeeeeCC-----eEEEEEeccCCCCHHHHHhhC---CCccCHHHHHHHHHHHHHHHHHHHhcCCC
Q 005278 463 EILRSIRHRNLIKIISNCCNID-----FKALVLEFMPNGSLEKWLYSH---NYFLGILERLNIMIDVGLALEYLHHGHST 534 (704)
Q Consensus 463 ~~l~~l~h~niv~l~~~~~~~~-----~~~lv~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~ 534 (704)
.-+-++-|.|||++..||.+.. ...+++|||..|++.++|++. ...+......+++-||..||.|||. +++
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCC
Confidence 3444557999999999986643 467899999999999999843 3447777888999999999999998 789
Q ss_pred CcEecCCCCCCeeeCCCCcEEEeeeccceecCC--CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhh
Q 005278 535 PMVHCDLKPNNILLDENMTAHVSDFGISKLLGE--GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFT 612 (704)
Q Consensus 535 ~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~t 612 (704)
+|+|+++.-+-|++..++-+|++--.-...... ...........+-++|.|||+-.....+.++|||+||+...||.-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 999999999999999999888742211111000 000111223356789999999888888889999999999999988
Q ss_pred CCCC-CCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHH
Q 005278 613 RKKP-TNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAK 688 (704)
Q Consensus 613 g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~ 688 (704)
+..- ..+ +... ... ..+...+-..-.+ .-..++.+|++..|..||+|++++..
T Consensus 278 lEiq~tns----eS~~--~~e----e~ia~~i~~len~-------------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNS----ESKV--EVE----ENIANVIIGLENG-------------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCC----ccee--ehh----hhhhhheeeccCc-------------cccCcCcccccCCCCCCcchhhhhcC
Confidence 7642 211 0000 000 0011111000000 01236889999999999999998654
No 464
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.40 E-value=3.4e-13 Score=144.23 Aligned_cols=194 Identities=33% Similarity=0.517 Sum_probs=95.2
Q ss_pred EEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCC-CCCEEEccCCcCccccChhhcCCCCcCeeeccC
Q 005278 89 VLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLS-GMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHG 167 (704)
Q Consensus 89 ~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 167 (704)
.|+++.|.+..... .+..+ ..++.|++.+|.++ .++.....+. +|+.|++++|.+. .+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~-~~~~~-~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNIS-ELLEL-TNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCch-hhhcc-cceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 56666666632211 11221 23555555555555 3344444442 5666666666655 3444555566666666666
Q ss_pred cccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCC
Q 005278 168 NKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLP 247 (704)
Q Consensus 168 n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 247 (704)
|+++ .+|......++|+.|++++|+++ .+|........|+.|.+++|.+. ..+..+..+.++..+.+.+|++. ..+
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~ 248 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLP 248 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-ecc
Confidence 6665 34444445555666666666665 44443333344555555555322 23444445555555555555544 223
Q ss_pred cccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeec
Q 005278 248 SNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQG 292 (704)
Q Consensus 248 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 292 (704)
..+..+++|+.|++++|+++ .++. ++.+.+++.|++++|.+..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~-~i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQIS-SISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred chhccccccceecccccccc-cccc-ccccCccCEEeccCccccc
Confidence 44444444445555555444 2222 4444444444444444443
No 465
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=8.1e-14 Score=138.52 Aligned_cols=212 Identities=23% Similarity=0.228 Sum_probs=105.6
Q ss_pred CCCCCCEEeccCccccccCc-hhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCCcccCChhhh
Q 005278 28 NASKLIMLDLSSNSFSGLIP-NTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIG 106 (704)
Q Consensus 28 ~l~~L~~L~L~~n~i~~~~~-~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~ 106 (704)
+++.|++..|.++.+..... +....+++++.|||++|-+...... ......+++|+.|+|+.|++..-......
T Consensus 119 n~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v-----~~i~eqLp~Le~LNls~Nrl~~~~~s~~~ 193 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPV-----LKIAEQLPSLENLNLSSNRLSNFISSNTT 193 (505)
T ss_pred hHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHH-----HHHHHhcccchhcccccccccCCccccch
Confidence 35555555555555553221 2445555555555555555443321 12234455555555555555422211111
Q ss_pred hcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccc-cChhhcCCCCcCeeeccCcccCCCCCccccCCCCCC
Q 005278 107 NFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGT-IPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLS 185 (704)
Q Consensus 107 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~ 185 (704)
. .+++|+.|.|+.|+++-. +-.....+|+|+.|+|..|...........-++.|+
T Consensus 194 ~------------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~ 249 (505)
T KOG3207|consen 194 L------------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQ 249 (505)
T ss_pred h------------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHh
Confidence 1 344555555555555411 112233455555555555532212222233345566
Q ss_pred EEEcCCCcCCccC-CccccCcCCCCEEEecCccCCCCCCCc------ccCCccccEEEecCcccC-CCCCcccccCcCCc
Q 005278 186 ELNLNGNKLCGHV-PPCLASLTSLRRLHLGSNKLTSTMPSS------FGSLEYVLYINLSANSLN-GSLPSNIQNLKVLT 257 (704)
Q Consensus 186 ~L~L~~n~l~~~~-~~~~~~l~~L~~L~l~~n~l~~~~~~~------~~~l~~L~~L~l~~N~l~-~~~~~~~~~l~~L~ 257 (704)
+|||++|++.... -...+.++.|+.|+++.|.+..+--.. ...+++|++|+++.|++. ......+..+++|+
T Consensus 250 ~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk 329 (505)
T KOG3207|consen 250 ELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLK 329 (505)
T ss_pred hccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhh
Confidence 6666666554221 123455566666666666655322111 234567777777777764 22334455567778
Q ss_pred EEEeecCccCC
Q 005278 258 NLDLSRNQLSG 268 (704)
Q Consensus 258 ~L~l~~n~l~~ 268 (704)
.|.+..|.+..
T Consensus 330 ~l~~~~n~ln~ 340 (505)
T KOG3207|consen 330 HLRITLNYLNK 340 (505)
T ss_pred hhhcccccccc
Confidence 88888888864
No 466
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.38 E-value=8.6e-14 Score=138.34 Aligned_cols=185 Identities=22% Similarity=0.118 Sum_probs=122.0
Q ss_pred CCCCCCEEecCCCcCcccCC--ccccCCCCCCEEeccCccccc--cCchhhcCCCCCCEEecccccCCCcccchhhcccc
Q 005278 4 MLPNLKYLTLFDNKLSGTIP--NSITNASKLIMLDLSSNSFSG--LIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLS 79 (704)
Q Consensus 4 ~l~~l~~L~l~~~~i~~~~~--~~~~~l~~L~~L~L~~n~i~~--~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~ 79 (704)
++++|+...|.++.+. ..+ .....+++++.|||+.|-+.. .+......|++|+.|+|+.|++....... .
T Consensus 119 n~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~---~-- 192 (505)
T KOG3207|consen 119 NLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSN---T-- 192 (505)
T ss_pred hHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCcccc---c--
Confidence 5788999999999988 344 478889999999999999884 34455789999999999999987644322 0
Q ss_pred cCCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCcccc-ChhhcCCC
Q 005278 80 SLTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTI-PTAVGRLR 158 (704)
Q Consensus 80 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~-~~~~~~l~ 158 (704)
-..+++|+.|.|++|.++-..-..+....++|+.|+|+.|.....-......+..|++|||++|++-... ....+.++
T Consensus 193 -~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~ 271 (505)
T KOG3207|consen 193 -TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLP 271 (505)
T ss_pred -hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCccccccccccccccc
Confidence 1256788888888888874433344444456777777777544444445555666777777777665222 13455666
Q ss_pred CcCeeeccCcccCCC-CCcc-----ccCCCCCCEEEcCCCcCC
Q 005278 159 RLQGLYLHGNKLQGS-IPYD-----LCHLEGLSELNLNGNKLC 195 (704)
Q Consensus 159 ~L~~L~L~~n~l~~~-~~~~-----l~~l~~L~~L~L~~n~l~ 195 (704)
.|..|+++.|.|... .|+. ...+++|++|+++.|++.
T Consensus 272 ~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~ 314 (505)
T KOG3207|consen 272 GLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR 314 (505)
T ss_pred chhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc
Confidence 677777776666532 1211 223455555555555553
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.34 E-value=1.4e-11 Score=130.11 Aligned_cols=168 Identities=17% Similarity=0.165 Sum_probs=128.1
Q ss_pred ECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHH
Q 005278 436 LFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERL 515 (704)
Q Consensus 436 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~ 515 (704)
..++.+|.|..++...........+-++.++.++||||+++++.+...+..|+|+|.+. .|..++.+.+ .....
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 45788999998876544445667888999999999999999999999999999999974 6777776543 44556
Q ss_pred HHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcceeccccccccccCCcccCCCCCC
Q 005278 516 NIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSVIQTMTIATIGYMAPEYGSEGIIS 595 (704)
Q Consensus 516 ~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~ 595 (704)
..+.||+.||.+|| ++.+++|++|.-..|++++.|+.||++|.++........ ......--..|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~--~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~-- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLN--DDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE-- 181 (690)
T ss_pred HHHHHHHHHHHHHh--ccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc--
Confidence 67899999999998 457799999999999999999999999998865432111 011111223456666544333
Q ss_pred cccceeeHHHHHHHHhhCCC
Q 005278 596 PKSDVYSYGILLMETFTRKK 615 (704)
Q Consensus 596 ~~~Dv~s~Gv~l~el~tg~~ 615 (704)
-..|.|.||++++|++.|..
T Consensus 182 ~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 182 WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred cchhhhhHHHHHHHHhCccc
Confidence 34699999999999999943
No 468
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.32 E-value=2.4e-12 Score=134.68 Aligned_cols=248 Identities=22% Similarity=0.228 Sum_probs=181.0
Q ss_pred CCCccccccc--cCceEEEEEEE---CCCCEEEEEEeeccch--hhhHHHHHHHHHHHhc-CCCCCceEEeeeeeCCeEE
Q 005278 416 GFNECNLLGT--GSFGSVYKGTL---FDGTNVAIKVFNLQLE--RASRSFDSECEILRSI-RHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 416 ~~~~~~~ig~--G~~g~V~~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 487 (704)
.|.....+|. |.+|.||.+.. .++..+|+|.-+.... .....=.+|+..-.++ .|++.++....+.+.+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556678999 99999999986 3688899997443322 2233334566666666 4999999999999999999
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHH----HHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeeccc
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGL----ALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGIS 562 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla 562 (704)
+-+|++. .++.++.+.....++....+.+..+..+ |+.++ |...++|-|+||.||+...+ ...+++|||+.
T Consensus 195 iqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~---hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v 270 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHL---HSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV 270 (524)
T ss_pred eeecccc-chhHHhhhcccccCCchhhhhHHhhhhhccccccccc---CCCcccccccchhheecccccceeecCCccee
Confidence 9999885 7999999877777888888989988888 98888 78889999999999999999 88999999999
Q ss_pred eecCCCCCcceec---cccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCc
Q 005278 563 KLLGEGDDSVIQT---MTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGL 639 (704)
Q Consensus 563 ~~~~~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 639 (704)
..++++....... ...|...|++||...+ .++...|+|++|.+..+..++..+...-. ...|..
T Consensus 271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~-----~~~W~~------- 337 (524)
T KOG0601|consen 271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGK-----NSSWSQ------- 337 (524)
T ss_pred EEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCC-----CCCccc-------
Confidence 9987765322111 2257888999998654 56889999999999999999876643210 111211
Q ss_pred chhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHH
Q 005278 640 TEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAA 687 (704)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~ 687 (704)
.++.+.. ......-..++...+..+++.+|-.|++++.+..
T Consensus 338 ---~r~~~ip----~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 ---LRQGYIP----LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred ---cccccCc----hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0000000 0011111234445788999999999998887643
No 469
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.28 E-value=8.8e-12 Score=134.26 Aligned_cols=146 Identities=17% Similarity=0.211 Sum_probs=97.1
Q ss_pred hCCCCccccccccCceEEEEEEECC-CCEEEEEEeeccchh----------------------------------hhH--
Q 005278 414 TNGFNECNLLGTGSFGSVYKGTLFD-GTNVAIKVFNLQLER----------------------------------ASR-- 456 (704)
Q Consensus 414 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~-- 456 (704)
-..|+. +.||.|++|.||+|++.+ |+.||||+.+..... ..+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 346776 799999999999999887 999999998744210 011
Q ss_pred ----HHHHHHHHHHhcC----CCCCceEEeeeee-CCeEEEEEeccCCCCHHHHH--hhCCCccCHHHHHHHHHHHHHHH
Q 005278 457 ----SFDSECEILRSIR----HRNLIKIISNCCN-IDFKALVLEFMPNGSLEKWL--YSHNYFLGILERLNIMIDVGLAL 525 (704)
Q Consensus 457 ----~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~~~~i~~~i~~~l 525 (704)
.+.+|+..+.+++ +.+.+.+-.++.+ ....++||||++|+++.++- ...+ .+. ..++...+..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g--~d~---~~la~~~v~~- 271 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG--TDM---KLLAERGVEV- 271 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC--CCH---HHHHHHHHHH-
Confidence 1344555555542 4444444444433 34568999999999998753 2222 221 1222222222
Q ss_pred HHHHhcCCCCcEecCCCCCCeeeCCCC----cEEEeeeccceecCC
Q 005278 526 EYLHHGHSTPMVHCDLKPNNILLDENM----TAHVSDFGISKLLGE 567 (704)
Q Consensus 526 ~~Lh~~h~~~ivH~dlk~~Nil~~~~~----~~kl~Dfgla~~~~~ 567 (704)
|+++-...|++|+|++|.||+++.++ .+++.|||++..+.+
T Consensus 272 -~~~Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 -FFTQVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred -HHHHHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 22222457899999999999999888 999999999987754
No 470
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.26 E-value=2.1e-11 Score=113.85 Aligned_cols=131 Identities=18% Similarity=0.163 Sum_probs=95.9
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCc-eEEeeeeeCCeEEEEEeccCCCCH
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLI-KIISNCCNIDFKALVLEFMPNGSL 498 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~gsL 498 (704)
.+.++.|.++.||+++.. +..+++|....... ....+..|+.+++.+.+.+++ +++.+. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 457899999999999864 77899998754321 223567899999998665544 444443 2335799999999887
Q ss_pred HHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcC--CCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 499 EKWLYSHNYFLGILERLNIMIDVGLALEYLHHGH--STPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 499 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h--~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
.+. . .....++.+++++++.||... ..+++|+|++|.||+++ ++.++++|||.+..
T Consensus 79 ~~~-~--------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTE-D--------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccc-c--------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 643 0 112345678999999996532 23469999999999999 67899999998763
No 471
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.26 E-value=7.4e-12 Score=114.39 Aligned_cols=139 Identities=25% Similarity=0.305 Sum_probs=42.2
Q ss_pred cCCCcCcccCCccccCCCCCCEEeccCccccccCchhhc-CCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEE
Q 005278 13 LFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFG-NLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLG 91 (704)
Q Consensus 13 l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~ 91 (704)
|..+.|. .++. +.+...+++|+|++|.|+.+ +.+. .+.+|++|+|++|.|+.++. +..++.|++|+
T Consensus 4 lt~~~i~-~~~~-~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l~~---------l~~L~~L~~L~ 70 (175)
T PF14580_consen 4 LTANMIE-QIAQ-YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKLEG---------LPGLPRLKTLD 70 (175)
T ss_dssp ------------------------------------S--TT-TT--EEE-TTS--S--TT-------------TT--EEE
T ss_pred ccccccc-cccc-cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccccC---------ccChhhhhhcc
Confidence 3444455 3333 45556788899999999865 2354 57888999999998887652 77788888888
Q ss_pred ccCCCCcccCChhhhhcccccceEEecCCccccc-CChhhhcCCCCCEEEccCCcCcccc---ChhhcCCCCcCeeec
Q 005278 92 LASNPLRGILPPLIGNFSASLQEFYAYGCKLRGN-IPQEIGNLSGMIVFDLNGCDLNGTI---PTAVGRLRRLQGLYL 165 (704)
Q Consensus 92 L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~~~l~~L~~L~L 165 (704)
+++|.|+.. ++.+....++|++|++++|+|... .-..++.+++|+.|+|.+|.+.... ...+..+|+|+.||-
T Consensus 71 L~~N~I~~i-~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 71 LSNNRISSI-SEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --SS---S--CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred cCCCCCCcc-ccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 888888844 333433234677777777777642 2244566677777777777665321 113445666666653
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.24 E-value=9.7e-13 Score=124.39 Aligned_cols=131 Identities=32% Similarity=0.361 Sum_probs=84.1
Q ss_pred CCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEE
Q 005278 156 RLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYI 235 (704)
Q Consensus 156 ~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 235 (704)
....|++|||++|.|+ .+.++..-++.++.|+++.|.|. .+. .+..+++|+.|||++|.++ ....+-..+.+++.|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3445666666666666 55555655666666666666666 222 2666666777777777665 333444456666777
Q ss_pred EecCcccCCCCCcccccCcCCcEEEeecCccCCC-CCCCcCCCCCcceeeccCceeec
Q 005278 236 NLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGD-IPTTIGGLENLETLSLADNQFQG 292 (704)
Q Consensus 236 ~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~L~~n~l~~ 292 (704)
.|+.|.|.+ ...+.++-+|..||+++|+|... -...++++|.|+.|.|.+|.+.+
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 777776652 23455566677788888887642 23467888888888888888874
No 473
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.22 E-value=8.7e-13 Score=141.16 Aligned_cols=248 Identities=26% Similarity=0.269 Sum_probs=113.8
Q ss_pred CCCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCCcccCChhhhh
Q 005278 28 NASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGN 107 (704)
Q Consensus 28 ~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~ 107 (704)
.+..+..+.+..|.|.. .-..+..+++|+.|++.+|+|..+... +..+++|++|+|++|.|+...+ +..
T Consensus 70 ~l~~l~~l~l~~n~i~~-~~~~l~~~~~l~~l~l~~n~i~~i~~~--------l~~~~~L~~L~ls~N~I~~i~~--l~~ 138 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAK-ILNHLSKLKSLEALDLYDNKIEKIENL--------LSSLVNLQVLDLSFNKITKLEG--LST 138 (414)
T ss_pred HhHhHHhhccchhhhhh-hhcccccccceeeeeccccchhhcccc--------hhhhhcchheeccccccccccc--hhh
Confidence 44555555566666653 223355566666666666666554321 3455666666666666653321 111
Q ss_pred cccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccC-hhhcCCCCcCeeeccCcccCCCCCccccCCCCCCE
Q 005278 108 FSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIP-TAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSE 186 (704)
Q Consensus 108 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~ 186 (704)
+. .|+.|++.+|.|... ..+..+..|+.+++++|.+....+ . ...+.+++.+++.+|.+.. ...+..+..+..
T Consensus 139 l~-~L~~L~l~~N~i~~~--~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~ 212 (414)
T KOG0531|consen 139 LT-LLKELNLSGNLISDI--SGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVL 212 (414)
T ss_pred cc-chhhheeccCcchhc--cCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHH
Confidence 11 122333333332211 112224455555555555542222 1 3444455555555555441 122333333334
Q ss_pred EEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCcc
Q 005278 187 LNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQL 266 (704)
Q Consensus 187 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l 266 (704)
+++..|.++...+ +..+.. ..|+.+++++|.+. ..+..+..+..+..|++++|++
T Consensus 213 ~~l~~n~i~~~~~--l~~~~~----------------------~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~ 267 (414)
T KOG0531|consen 213 LSLLDNKISKLEG--LNELVM----------------------LHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRI 267 (414)
T ss_pred hhcccccceeccC--cccchh----------------------HHHHHHhcccCccc-cccccccccccccccchhhccc
Confidence 4444444442111 111111 02445555555544 2223444455566666666666
Q ss_pred CCCCCCCcCCCCCcceeeccCceeec---cCCcc-cccccccceEEecccCCCCCCC
Q 005278 267 SGDIPTTIGGLENLETLSLADNQFQG---PVPKS-FGSLISLESLDLSRNNLSGEIP 319 (704)
Q Consensus 267 ~~~~~~~~~~l~~L~~L~L~~n~l~~---~~p~~-~~~l~~L~~L~l~~N~l~~~~p 319 (704)
... ..+.....+..+.+..|.+.. ..... ....+.++.+.+.+|++....+
T Consensus 268 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 268 SNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred ccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 522 123444555566666666542 11111 4566777777777777765544
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.22 E-value=1.4e-12 Score=123.42 Aligned_cols=133 Identities=27% Similarity=0.402 Sum_probs=108.0
Q ss_pred CCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEE
Q 005278 181 LEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLD 260 (704)
Q Consensus 181 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 260 (704)
.+.|++|||++|.|+ .+.++..-.|.++.|++++|.|..+ +.+..+++|+.||||+|.++ .+..+--++-+.+.|.
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~ 358 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLK 358 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeee
Confidence 356899999999998 6666777789999999999999843 34888999999999999988 4555556778899999
Q ss_pred eecCccCCCCCCCcCCCCCcceeeccCceeecc-CCcccccccccceEEecccCCCCCCC
Q 005278 261 LSRNQLSGDIPTTIGGLENLETLSLADNQFQGP-VPKSFGSLISLESLDLSRNNLSGEIP 319 (704)
Q Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p 319 (704)
|++|.|.. -..++.+.+|..||+++|+|... --..++++|-|+.+.|.+||+.+...
T Consensus 359 La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 359 LAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred hhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 99999862 23477888999999999999742 23568899999999999999986543
No 475
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.19 E-value=4e-10 Score=105.18 Aligned_cols=137 Identities=21% Similarity=0.175 Sum_probs=97.6
Q ss_pred ccccccCceEEEEEEECC-------CCEEEEEEeeccc----------------------hhhhHH----HHHHHHHHHh
Q 005278 421 NLLGTGSFGSVYKGTLFD-------GTNVAIKVFNLQL----------------------ERASRS----FDSECEILRS 467 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~-------~~~vavK~~~~~~----------------------~~~~~~----~~~e~~~l~~ 467 (704)
..||.|.-+.||.|.-.+ +..+|||+++... ....+. .++|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999997443 4799999875321 001112 3489999999
Q ss_pred cCC--CCCceEEeeeeeCCeEEEEEeccCCCCHHH-HHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCC
Q 005278 468 IRH--RNLIKIISNCCNIDFKALVLEFMPNGSLEK-WLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPN 544 (704)
Q Consensus 468 l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~ 544 (704)
+.. -++.+.+++ ...++||||+.++.+.. .+.. ..++......+..+++.++..++ |+.++||||+++.
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~--H~~glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLY--KECNLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHH--HhCCeecCCCCHH
Confidence 953 456666664 34579999997654422 1221 12444556677889999999885 4568999999999
Q ss_pred CeeeCCCCcEEEeeeccceecC
Q 005278 545 NILLDENMTAHVSDFGISKLLG 566 (704)
Q Consensus 545 Nil~~~~~~~kl~Dfgla~~~~ 566 (704)
||+++ ++.++++|||.+....
T Consensus 155 NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 155 NMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HEEEE-CCcEEEEECCCceeCC
Confidence 99997 4679999999887653
No 476
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=3e-10 Score=101.70 Aligned_cols=131 Identities=23% Similarity=0.317 Sum_probs=101.0
Q ss_pred ccccccCceEEEEEEECCCCEEEEEEeeccc--------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEEec
Q 005278 421 NLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL--------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVLEF 492 (704)
Q Consensus 421 ~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 492 (704)
..+++|+-+.+|.+.+. |..+++|.=..+. .-..+...+|++++.+++--.|...+-+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 36889999999999765 4446666432211 11234567899999999766666666666778888899999
Q ss_pred cCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 493 MPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 493 ~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
++|..|.+.+... ...++..+..-+.-| |..+|||+|+.++||.+..+. +.++|||++..
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~l---H~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKL---HKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHH---HhcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888765 255677777777888 668999999999999998766 99999999985
No 477
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=1.6e-11 Score=112.19 Aligned_cols=121 Identities=31% Similarity=0.381 Sum_probs=34.1
Q ss_pred CCCEEEcCCCcCCccCCcccc-CcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCccc-ccCcCCcEEE
Q 005278 183 GLSELNLNGNKLCGHVPPCLA-SLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNI-QNLKVLTNLD 260 (704)
Q Consensus 183 ~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~L~ 260 (704)
++++|+|.+|+|+. +. .++ .+.+|+.|++++|.|+.. +.+..+++|+.|++++|.|+. +...+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-IE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-cc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 44555555555552 21 232 344555555555555522 234455555555555555552 22222 2455666666
Q ss_pred eecCccCCCC-CCCcCCCCCcceeeccCceeeccCC----cccccccccceEEe
Q 005278 261 LSRNQLSGDI-PTTIGGLENLETLSLADNQFQGPVP----KSFGSLISLESLDL 309 (704)
Q Consensus 261 l~~n~l~~~~-~~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~l 309 (704)
+++|+|.... -..++.+++|+.|+|.+|+++.. + ..+..+|+|+.||-
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-TT-SEETT
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcChhheeCC
Confidence 6666665311 13455566666666666666532 2 12456677776543
No 478
>PLN03150 hypothetical protein; Provisional
Probab=99.15 E-value=6.4e-11 Score=132.50 Aligned_cols=114 Identities=32% Similarity=0.531 Sum_probs=106.1
Q ss_pred CCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeecc
Q 005278 207 SLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLA 286 (704)
Q Consensus 207 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~ 286 (704)
.++.|+|++|.+.+.+|..+..+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCcccccc-cccceEEecccCCCCCCCC
Q 005278 287 DNQFQGPVPKSFGSL-ISLESLDLSRNNLSGEIPK 320 (704)
Q Consensus 287 ~n~l~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~ 320 (704)
+|+++|.+|..+..+ .++..+++.+|+..+..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 999999999998764 5678999999997766554
No 479
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.15 E-value=3e-12 Score=137.02 Aligned_cols=243 Identities=26% Similarity=0.282 Sum_probs=175.9
Q ss_pred CCCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCCcccCChhhhhc
Q 005278 29 ASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPPLIGNF 108 (704)
Q Consensus 29 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~ 108 (704)
-+.++.++...+.+...... ...+..++.+++..|.|..+.. .+..+++|+.|++..|+|.....
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~l~l~~n~i~~~~~--------~l~~~~~l~~l~l~~n~i~~i~~------ 112 (414)
T KOG0531|consen 48 PSDLEEIDLIFNLDGSDEDL-VESLTSLKELNLRQNLIAKILN--------HLSKLKSLEALDLYDNKIEKIEN------ 112 (414)
T ss_pred cchhhhhcchhccccchhhh-HHHhHhHHhhccchhhhhhhhc--------ccccccceeeeeccccchhhccc------
Confidence 34566667766666643322 2567778888899999987322 27788999999999999984321
Q ss_pred ccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEE
Q 005278 109 SASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELN 188 (704)
Q Consensus 109 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~ 188 (704)
.+..+++|++|++++|.|+.+. .+..++.|+.|++++|.|+.. ..+..+++|+.++
T Consensus 113 --------------------~l~~~~~L~~L~ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~--~~~~~l~~L~~l~ 168 (414)
T KOG0531|consen 113 --------------------LLSSLVNLQVLDLSFNKITKLE--GLSTLTLLKELNLSGNLISDI--SGLESLKSLKLLD 168 (414)
T ss_pred --------------------chhhhhcchheecccccccccc--chhhccchhhheeccCcchhc--cCCccchhhhccc
Confidence 1567788888888888888443 356667788899999998732 3566688899999
Q ss_pred cCCCcCCccCC-ccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEeecCccC
Q 005278 189 LNGNKLCGHVP-PCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLS 267 (704)
Q Consensus 189 L~~n~l~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~ 267 (704)
+++|+++..-+ . ...+.+|+.+++.+|.+. ....+..+..+..+++..|.+...-+........|+.+++++|++.
T Consensus 169 l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~--~i~~~~~~~~l~~~~l~~n~i~~~~~l~~~~~~~L~~l~l~~n~i~ 245 (414)
T KOG0531|consen 169 LSYNRIVDIENDE-LSELISLEELDLGGNSIR--EIEGLDLLKKLVLLSLLDNKISKLEGLNELVMLHLRELYLSGNRIS 245 (414)
T ss_pred CCcchhhhhhhhh-hhhccchHHHhccCCchh--cccchHHHHHHHHhhcccccceeccCcccchhHHHHHHhcccCccc
Confidence 99999884433 2 577888999999999887 3344555566666788888887432221111113899999999998
Q ss_pred CCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCCC
Q 005278 268 GDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSG 316 (704)
Q Consensus 268 ~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 316 (704)
..+..+..+.++..|++.+|++... ..+...+.+..++.+.|++..
T Consensus 246 -~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~ 291 (414)
T KOG0531|consen 246 -RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLAL 291 (414)
T ss_pred -cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcc
Confidence 5556788899999999999998742 345677788888999998874
No 480
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.10 E-value=1.1e-09 Score=97.30 Aligned_cols=142 Identities=20% Similarity=0.247 Sum_probs=105.2
Q ss_pred ccccccccCceEEEEEEECCCCEEEEEEe-eccc-------hhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEEEEE
Q 005278 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVF-NLQL-------ERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKALVL 490 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~-~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 490 (704)
....+-||+-+.|+++.+. |+...||.- .+.. .-..++..+|++.+.+++--.|.-..-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 5678999999999999864 777777742 2211 123456788999999987656655555666666678999
Q ss_pred eccCC-CCHHHHHhhCCCccC-HHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCC---cEEEeeecccee
Q 005278 491 EFMPN-GSLEKWLYSHNYFLG-ILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENM---TAHVSDFGISKL 564 (704)
Q Consensus 491 e~~~~-gsL~~~l~~~~~~~~-~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~---~~kl~Dfgla~~ 564 (704)
||+++ .++.+++......-. .......+..|.+.+.-| |..+|+|+|+.++||++..++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igkl---H~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKL---HDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHh---hhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 478888875432222 233367899999999999 567799999999999997554 468999999874
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=9.8e-11 Score=122.79 Aligned_cols=249 Identities=19% Similarity=0.139 Sum_probs=173.0
Q ss_pred HHHhCCCCccccccccCceEEEEEEEC--CCCEEEEEEeeccchhhhHH--HHHHHHHHHhc-CCCCCceEEeeeeeCCe
Q 005278 411 QRATNGFNECNLLGTGSFGSVYKGTLF--DGTNVAIKVFNLQLERASRS--FDSECEILRSI-RHRNLIKIISNCCNIDF 485 (704)
Q Consensus 411 ~~~~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 485 (704)
.....+|..+..||.|.|+.|++...+ ++..+++|...........+ -..|+.+...+ .|.++++....|..-+.
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 344568889999999999999998643 57888988775443222221 23456565555 58999998888888888
Q ss_pred EEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCC-CcEEEeeecccee
Q 005278 486 KALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDEN-MTAHVSDFGISKL 564 (704)
Q Consensus 486 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~-~~~kl~Dfgla~~ 564 (704)
.++--||+++++...... -..-++...++++..+++.++.++ |++.++|+|++|+||++..+ +..+++|||.+..
T Consensus 341 ~~ip~e~~~~~s~~l~~~-~~~~~d~~~~~~~~~q~~~~l~~i---~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV-TSQMLDEDPRLRLTAQILTALNVI---HSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred ccCchhhhcCcchhhhhH-HHHhcCcchhhhhHHHHHhccccc---cchhhhcccccccceeeccchhhhhccccccccc
Confidence 889999999998877662 223356677888999999999999 68999999999999999886 8889999999874
Q ss_pred cCCCCCcceecccccccccc--CCcccCCCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchh
Q 005278 565 LGEGDDSVIQTMTIATIGYM--APEYGSEGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEV 642 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 642 (704)
+.-. .....+.-+++ +|+......+..+.|++|||..+.|..++..--.. ..+|.. +
T Consensus 417 ~~~~-----~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-------~~~~~~---------i 475 (524)
T KOG0601|consen 417 LAFS-----SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-------GVQSLT---------I 475 (524)
T ss_pred ccee-----cccccccccccccchhhccccccccccccccccccccccccCcccCcc-------ccccee---------e
Confidence 3211 11112333344 56666677888999999999999999998643211 011100 0
Q ss_pred ccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHHHHHHHHHH
Q 005278 643 VDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMKDAAAKLKK 691 (704)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ev~~~L~~ 691 (704)
. ....+........+..+...+...++..||.+.+.....+-
T Consensus 476 ~-------~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 476 R-------SGDTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred e-------cccccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 0 00011111222445667778888999999999887665443
No 482
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.07 E-value=8.1e-11 Score=134.30 Aligned_cols=287 Identities=23% Similarity=0.239 Sum_probs=153.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCcc--ccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNS--FSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTN 83 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~ 83 (704)
...+...+-+|.+. .++.+.. .+.|++|-+.+|. +..+....|..|+.|++|||++|.--. .+|+.++.
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~-~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~-------~LP~~I~~ 593 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSE-NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLS-------KLPSSIGE 593 (889)
T ss_pred hheeEEEEeccchh-hccCCCC-CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccC-------cCChHHhh
Confidence 34455566666655 3344322 3367777777775 555555567777777777777653211 24555677
Q ss_pred CCCCcEEEccCCCCcccCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcC--ccccChhhcCCCCcC
Q 005278 84 CRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDL--NGTIPTAVGRLRRLQ 161 (704)
Q Consensus 84 l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l--~~~~~~~~~~l~~L~ 161 (704)
+-+|++|+|+++.+. .+|..+.++. .|.+|++..+.....+|.....+++|++|.+..-.. ....-..+..+.+|+
T Consensus 594 Li~LryL~L~~t~I~-~LP~~l~~Lk-~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~ 671 (889)
T KOG4658|consen 594 LVHLRYLDLSDTGIS-HLPSGLGNLK-KLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLE 671 (889)
T ss_pred hhhhhcccccCCCcc-ccchHHHHHH-hhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchh
Confidence 777777777777776 6677777764 577777777666655666666677777777765442 222233344455555
Q ss_pred eeeccCcccCCCCCccccCCCCCC----EEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccC------Ccc
Q 005278 162 GLYLHGNKLQGSIPYDLCHLEGLS----ELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGS------LEY 231 (704)
Q Consensus 162 ~L~L~~n~l~~~~~~~l~~l~~L~----~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~------l~~ 231 (704)
.+....... .+-..+..++.|. .+.+.++... ..+..+..+.+|+.|.+.++.+.......+.. +++
T Consensus 672 ~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~ 748 (889)
T KOG4658|consen 672 NLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPN 748 (889)
T ss_pred hheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHH
Confidence 555433332 1112222333332 3333333333 34455667777777777777765332222211 222
Q ss_pred ccEEEecCcccCCCCCcccccCcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeecc-CCcccccccccceE
Q 005278 232 VLYINLSANSLNGSLPSNIQNLKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGP-VPKSFGSLISLESL 307 (704)
Q Consensus 232 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L 307 (704)
+..+...++... ..+.+.--.++|+.|++..+.....+......+..++.+-+..+.+.+. .-...+.++++..+
T Consensus 749 l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l~~~~~l~~l~~i~~~ 824 (889)
T KOG4658|consen 749 LSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGLRMLCSLGGLPQLYWL 824 (889)
T ss_pred HHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccceeeecCCCCceeEec
Confidence 222222222221 2222333446777777777776666655566666666655666655543 23333444444433
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=1.2e-09 Score=107.00 Aligned_cols=143 Identities=20% Similarity=0.206 Sum_probs=109.4
Q ss_pred cccccccCceEEEEEEECCCCEEEEEEeeccch-hhhHHHHHHHHHHHhcCCC--CCceEEeeeeeCC---eEEEEEecc
Q 005278 420 CNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLE-RASRSFDSECEILRSIRHR--NLIKIISNCCNID---FKALVLEFM 493 (704)
Q Consensus 420 ~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~~~---~~~lv~e~~ 493 (704)
.+.++.|..+.||+++..+|+.+++|....... .....+..|.++++.+++. ++.+++.+..... ..++||||+
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i 82 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERV 82 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEe
Confidence 357899999999999877778999999754322 1345789999999999763 4577777776543 568999999
Q ss_pred CCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 005278 494 PNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHG------------------------------------------ 531 (704)
Q Consensus 494 ~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~------------------------------------------ 531 (704)
++.++.+.+.. ..++......++.++++++..||..
T Consensus 83 ~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (223)
T cd05154 83 DGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERL 160 (223)
T ss_pred CCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHH
Confidence 99888775432 2356667777888888888888742
Q ss_pred -----------CCCCcEecCCCCCCeeeCC--CCcEEEeeecccee
Q 005278 532 -----------HSTPMVHCDLKPNNILLDE--NMTAHVSDFGISKL 564 (704)
Q Consensus 532 -----------h~~~ivH~dlk~~Nil~~~--~~~~kl~Dfgla~~ 564 (704)
....++|+|+.|.||+++. ++.+.++||+.+..
T Consensus 161 ~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 161 LRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1245799999999999998 56789999988764
No 484
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=99.06 E-value=5.9e-09 Score=104.08 Aligned_cols=265 Identities=12% Similarity=0.095 Sum_probs=167.0
Q ss_pred ccccccccCceEEEEEEECCCCEEEEEEeeccchhhhHHHHHHHHHHHhc-CCCCCceEEeee-------eeCCeEEEEE
Q 005278 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQLERASRSFDSECEILRSI-RHRNLIKIISNC-------CNIDFKALVL 490 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~-------~~~~~~~lv~ 490 (704)
....+|+|+.+.+|-.- +-...+.|++.....-.. .+.+..|... .||-+-.-+.|= ..+....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~--e~~d~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLG--EVRDQVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecc--hhhchhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 45679999999998642 223345687765432211 1223344444 455433212111 1122356777
Q ss_pred eccCCC-CHHHHHh-----hCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeecccee
Q 005278 491 EFMPNG-SLEKWLY-----SHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKL 564 (704)
Q Consensus 491 e~~~~g-sL~~~l~-----~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~ 564 (704)
..+++- .+..+.. .+-....|....++++.+|.+.+.|| ..|.+-+|+.++|+|+.+++.+.+.|=..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccceee
Confidence 776654 2223222 12234789999999999999999995 56788899999999999999999998654443
Q ss_pred cCCCCCcceeccccccccccCCccc-----CCCCCCcccceeeHHHHHHHHhhC-CCCCCcccccc---ccHH-HHHHhh
Q 005278 565 LGEGDDSVIQTMTIATIGYMAPEYG-----SEGIISPKSDVYSYGILLMETFTR-KKPTNEIFIGE---MSLK-HWVKES 634 (704)
Q Consensus 565 ~~~~~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~Gv~l~el~tg-~~p~~~~~~~~---~~~~-~~~~~~ 634 (704)
. .........+|...|.+||.- .+...+...|.|.+||++++++.| ++||.+..... ..+. ......
T Consensus 167 ~---~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 N---ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred c---cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 3 233445667899999999963 344567789999999999999986 99998853221 1111 111100
Q ss_pred cCCCcchhcc--ccchhhhhhhhhhHHHHHHHHHHHhhhcCCC--CCCCCCHHHHHHHHHHhHHHhhhh
Q 005278 635 LPDGLTEVVD--ANLVREEQAFSVKIDCLLSIMHLALDCCMES--PEQRVSMKDAAAKLKKIKEKFLDD 699 (704)
Q Consensus 635 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~--P~~Rpt~~ev~~~L~~~~~~~~~~ 699 (704)
+ ...-+ +.+.. .+......-.++++.-+..+|+... |.-||+++-++..|.++.++...=
T Consensus 244 f----~ya~~~~~g~~p-~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C 307 (637)
T COG4248 244 F----AYASDQRRGLKP-PPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKC 307 (637)
T ss_pred e----eechhccCCCCC-CCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhh
Confidence 0 00001 01111 1112233345667788888998764 678999999999999998877653
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.97 E-value=4.6e-10 Score=84.28 Aligned_cols=61 Identities=43% Similarity=0.646 Sum_probs=38.4
Q ss_pred CCCCEEecCCCcCcccCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEecccccC
Q 005278 6 PNLKYLTLFDNKLSGTIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYL 66 (704)
Q Consensus 6 ~~l~~L~l~~~~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i 66 (704)
|+|++|+|++|+++.+-++.|.++++|++|++++|.++.+.+++|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4566666666666655445666666666666666666666666666666666666666653
No 486
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.95 E-value=1.4e-10 Score=127.84 Aligned_cols=251 Identities=22% Similarity=0.253 Sum_probs=165.1
Q ss_pred HHhCCCCccccccccCceEEEEEEEC-CCCEEEEEEeecc---chhhhHHHHHHHHHHHhcCCCCCceEEeeeeeCCeEE
Q 005278 412 RATNGFNECNLLGTGSFGSVYKGTLF-DGTNVAIKVFNLQ---LERASRSFDSECEILRSIRHRNLIKIISNCCNIDFKA 487 (704)
Q Consensus 412 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 487 (704)
...+++.+.+.+.+|.++.++.++-. .|...+.|+.... ...+.+....+-.+.-..++|-+++..--+......+
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~ 880 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLP 880 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcc
Confidence 35567788888999999999887632 2433333332211 1112222222223333334566665555545566778
Q ss_pred EEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 488 LVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 488 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
++++|..++++...++..+. .+..........+.++.+|| |...+.|+|++|.|.+...+++.+++|||.....+.
T Consensus 881 L~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L---~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~ 956 (1205)
T KOG0606|consen 881 LVGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESL---HSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGL 956 (1205)
T ss_pred hhhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhcc---ccchhhcccccccchhhcccCCcccCcccccccccc
Confidence 99999999999999886553 33334444556678889999 667799999999999999999999999985433211
Q ss_pred C---------------------C--------CcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCCCCC
Q 005278 568 G---------------------D--------DSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKKPTN 618 (704)
Q Consensus 568 ~---------------------~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~p~~ 618 (704)
. . .........||+.|.+||...+......+|.|++|++++|.++|..||.
T Consensus 957 ~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~n 1036 (1205)
T KOG0606|consen 957 IPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFN 1036 (1205)
T ss_pred ccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCC
Confidence 0 0 0011223468999999999999999999999999999999999999997
Q ss_pred ccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhhhcCCCCCCCCCHH
Q 005278 619 EIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALDCCMESPEQRVSMK 683 (704)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~~P~~Rpt~~ 683 (704)
....... +..+......+. ..+...+....+++...+..+|.+|-.|.
T Consensus 1037 a~tpq~~-------------f~ni~~~~~~~p----~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1037 AETPQQI-------------FENILNRDIPWP----EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred Ccchhhh-------------hhccccCCCCCC----CCccccChhhhhhhhhhhccCchhccCcc
Confidence 7432211 111222111111 11223344566788888889999998765
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.92 E-value=8.5e-10 Score=82.83 Aligned_cols=61 Identities=38% Similarity=0.543 Sum_probs=56.2
Q ss_pred CCCCEEeccCccccccCchhhcCCCCCCEEecccccCCCcccchhhcccccCCCCCCCcEEEccCCCC
Q 005278 30 SKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNYLMTESSAAKWNFLSSLTNCRNLTVLGLASNPL 97 (704)
Q Consensus 30 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i 97 (704)
++|++|++++|+++.+.+++|.++++|++|++++|.++.++..+ |.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~-------f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDA-------FSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTT-------TTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHH-------HcCCCCCCEEeCcCCcC
Confidence 57899999999999998899999999999999999999887665 99999999999999985
No 488
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.91 E-value=1.3e-10 Score=108.75 Aligned_cols=258 Identities=19% Similarity=0.249 Sum_probs=121.3
Q ss_pred cCCCCCCEEeccCcccccc----CchhhcCCCCCCEEecccccCCCccc---chhhcccccCCCCCCCcEEEccCCCCcc
Q 005278 27 TNASKLIMLDLSSNSFSGL----IPNTFGNLGSLQVLSLAYNYLMTESS---AAKWNFLSSLTNCRNLTVLGLASNPLRG 99 (704)
Q Consensus 27 ~~l~~L~~L~L~~n~i~~~----~~~~~~~l~~L~~L~L~~n~i~~~~~---~~~~~~~~~~~~l~~L~~L~L~~n~i~~ 99 (704)
.-+..+++++|++|.|... ++..+.+-.+|+..+++.-.....-. ....-+...+.+|+.|+.++||.|.+..
T Consensus 27 ~~~d~~~evdLSGNtigtEA~e~l~~~ia~~~~L~vvnfsd~ftgr~kde~~~~L~~Ll~aLlkcp~l~~v~LSDNAfg~ 106 (388)
T COG5238 27 EMMDELVEVDLSGNTIGTEAMEELCNVIANVRNLRVVNFSDAFTGRDKDELYSNLVMLLKALLKCPRLQKVDLSDNAFGS 106 (388)
T ss_pred HhhcceeEEeccCCcccHHHHHHHHHHHhhhcceeEeehhhhhhcccHHHHHHHHHHHHHHHhcCCcceeeeccccccCc
Confidence 3366777777777777643 33345555666666665532221110 0011123335566677777777776665
Q ss_pred cCChhhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccCCCCCcccc
Q 005278 100 ILPPLIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQGSIPYDLC 179 (704)
Q Consensus 100 ~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 179 (704)
..|+.+..+ +++-+.|++|.|++|++..+-.+-++. .|. +|..|+ ..+
T Consensus 107 ~~~e~L~d~---------------------is~~t~l~HL~l~NnGlGp~aG~rigk--al~--~la~nK-------Kaa 154 (388)
T COG5238 107 EFPEELGDL---------------------ISSSTDLVHLKLNNNGLGPIAGGRIGK--ALF--HLAYNK-------KAA 154 (388)
T ss_pred ccchHHHHH---------------------HhcCCCceeEEeecCCCCccchhHHHH--HHH--HHHHHh-------hhc
Confidence 555544432 334445555555555544222222220 000 011111 111
Q ss_pred CCCCCCEEEcCCCcCCccCC----ccccCcCCCCEEEecCccCCCCCC-----CcccCCccccEEEecCcccCCC----C
Q 005278 180 HLEGLSELNLNGNKLCGHVP----PCLASLTSLRRLHLGSNKLTSTMP-----SSFGSLEYVLYINLSANSLNGS----L 246 (704)
Q Consensus 180 ~l~~L~~L~L~~n~l~~~~~----~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~l~~L~~L~l~~N~l~~~----~ 246 (704)
+-|.|+...+.+|++..... ..+..-.+|+.+.+..|.|....- ..+..+.+|+.|||.+|.++.. +
T Consensus 155 ~kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~L 234 (388)
T COG5238 155 DKPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYL 234 (388)
T ss_pred cCCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHH
Confidence 22345555555555441110 111122345555555555432110 1122344555555555555421 2
Q ss_pred CcccccCcCCcEEEeecCccCCCCCCCc------CCCCCcceeeccCceeeccCCcc-----c--ccccccceEEecccC
Q 005278 247 PSNIQNLKVLTNLDLSRNQLSGDIPTTI------GGLENLETLSLADNQFQGPVPKS-----F--GSLISLESLDLSRNN 313 (704)
Q Consensus 247 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~------~~l~~L~~L~L~~n~l~~~~p~~-----~--~~l~~L~~L~l~~N~ 313 (704)
...++.++.|+.|.+..|-++......+ ...++|..|...+|...+.+... + .++|-|..|.+.+|+
T Consensus 235 a~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr 314 (388)
T COG5238 235 ADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNR 314 (388)
T ss_pred HHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCc
Confidence 2344455556666666666654333221 13466677777777655422211 1 367778888888888
Q ss_pred CCC
Q 005278 314 LSG 316 (704)
Q Consensus 314 l~~ 316 (704)
|..
T Consensus 315 ~~E 317 (388)
T COG5238 315 IKE 317 (388)
T ss_pred chh
Confidence 864
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.90 E-value=1.5e-08 Score=94.40 Aligned_cols=127 Identities=21% Similarity=0.245 Sum_probs=82.5
Q ss_pred EEEEEEECCCCEEEEEEeeccc--------------------------hhhhHHHHHHHHHHHhcCCC--CCceEEeeee
Q 005278 430 SVYKGTLFDGTNVAIKVFNLQL--------------------------ERASRSFDSECEILRSIRHR--NLIKIISNCC 481 (704)
Q Consensus 430 ~V~~~~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 481 (704)
.||.|...+|..+|||+.+... .......++|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899998889999999875320 00123467899999999766 456666542
Q ss_pred eCCeEEEEEeccC--CCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeee
Q 005278 482 NIDFKALVLEFMP--NGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDF 559 (704)
Q Consensus 482 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Df 559 (704)
...+||||++ +..+....... ++......++.++...+..++ |..||+|||+.+.||+++++ .+.++||
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~--~~~givHGDLs~~NIlv~~~-~~~iIDf 150 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKML--HKAGIVHGDLSEYNILVDDG-KVYIIDF 150 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHH--HCTTEEESS-STTSEEEETT-CEEE--G
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHH--HhcCceecCCChhhEEeecc-eEEEEec
Confidence 2369999998 55554433322 112334556777777555543 56899999999999999988 9999999
Q ss_pred ccceecC
Q 005278 560 GISKLLG 566 (704)
Q Consensus 560 gla~~~~ 566 (704)
|.+....
T Consensus 151 ~qav~~~ 157 (188)
T PF01163_consen 151 GQAVDSS 157 (188)
T ss_dssp TTEEETT
T ss_pred CcceecC
Confidence 9887643
No 490
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.88 E-value=2.2e-09 Score=122.72 Aligned_cols=277 Identities=22% Similarity=0.240 Sum_probs=186.9
Q ss_pred ccCCCCCCEEeccCccccccCchhhcCCCCCCEEeccccc--CCCcccchhhcccccCCCCCCCcEEEccCCCCcccCCh
Q 005278 26 ITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNY--LMTESSAAKWNFLSSLTNCRNLTVLGLASNPLRGILPP 103 (704)
Q Consensus 26 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~--i~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~ 103 (704)
..+....+...+-+|.+..+ +.... .++|++|-+..|. +..++..- |..++.|+.|||++|.=.+.+|.
T Consensus 519 ~~~~~~~rr~s~~~~~~~~~-~~~~~-~~~L~tLll~~n~~~l~~is~~f-------f~~m~~LrVLDLs~~~~l~~LP~ 589 (889)
T KOG4658|consen 519 VKSWNSVRRMSLMNNKIEHI-AGSSE-NPKLRTLLLQRNSDWLLEISGEF-------FRSLPLLRVLDLSGNSSLSKLPS 589 (889)
T ss_pred ccchhheeEEEEeccchhhc-cCCCC-CCccceEEEeecchhhhhcCHHH-------HhhCcceEEEECCCCCccCcCCh
Confidence 34557889999999999844 33333 4479999999996 55554433 88899999999999988889999
Q ss_pred hhhhcccccceEEecCCcccccCChhhhcCCCCCEEEccCCcCccccChhhcCCCCcCeeeccCcccC--CCCCccccCC
Q 005278 104 LIGNFSASLQEFYAYGCKLRGNIPQEIGNLSGMIVFDLNGCDLNGTIPTAVGRLRRLQGLYLHGNKLQ--GSIPYDLCHL 181 (704)
Q Consensus 104 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--~~~~~~l~~l 181 (704)
.++.+. +|+.|+++++.+. .+|..+++|..|.+|++..+.-...+++....+++|++|.+..-... ...-..+..+
T Consensus 590 ~I~~Li-~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~L 667 (889)
T KOG4658|consen 590 SIGELV-HLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENL 667 (889)
T ss_pred HHhhhh-hhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcc
Confidence 999986 7999999999999 89999999999999999999876677888888999999999876532 2223344555
Q ss_pred CCCCEEEcCCCcCCccCCccccCcCCCC----EEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCccccc-----
Q 005278 182 EGLSELNLNGNKLCGHVPPCLASLTSLR----RLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQN----- 252 (704)
Q Consensus 182 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~----~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~----- 252 (704)
.+|+.+....... .+...+..++.|. .+.+.++... ..+..+..+.+|+.|.+.++.+..........
T Consensus 668 e~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~ 744 (889)
T KOG4658|consen 668 EHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLL 744 (889)
T ss_pred cchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhh
Confidence 6666666544332 1111223333333 4444443333 45667788899999999999886433322211
Q ss_pred -CcCCcEEEeecCccCCCCCCCcCCCCCcceeeccCceeeccCCcccccccccceEEecccCCCCC
Q 005278 253 -LKVLTNLDLSRNQLSGDIPTTIGGLENLETLSLADNQFQGPVPKSFGSLISLESLDLSRNNLSGE 317 (704)
Q Consensus 253 -l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 317 (704)
++++..+...++... ..+...-..++|+.|.+.++.....+......+..+..+-+..+.+.+.
T Consensus 745 ~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~l 809 (889)
T KOG4658|consen 745 CFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEGL 809 (889)
T ss_pred hHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEecccccccc
Confidence 223333333333222 2222233457788888888877666666666666666655555555543
No 491
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.86 E-value=8.7e-11 Score=109.90 Aligned_cols=180 Identities=19% Similarity=0.151 Sum_probs=112.7
Q ss_pred hhhcCCCCCEEEccCCcCccccCh----hhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccC
Q 005278 129 EIGNLSGMIVFDLNGCDLNGTIPT----AVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLAS 204 (704)
Q Consensus 129 ~~~~l~~L~~L~L~~n~l~~~~~~----~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~ 204 (704)
++-.|++|+..+||+|.+....|. .+++-+.|+.|.|++|.+...--..+++ .|.+ |..| .-..+
T Consensus 87 aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigk--al~~--la~n-------KKaa~ 155 (388)
T COG5238 87 ALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGK--ALFH--LAYN-------KKAAD 155 (388)
T ss_pred HHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHH--HHHH--HHHH-------hhhcc
Confidence 455666666666666666544333 2334455666666666554111111110 0110 0111 12345
Q ss_pred cCCCCEEEecCccCCCCCC----CcccCCccccEEEecCcccCCCCC-----cccccCcCCcEEEeecCccCCC----CC
Q 005278 205 LTSLRRLHLGSNKLTSTMP----SSFGSLEYVLYINLSANSLNGSLP-----SNIQNLKVLTNLDLSRNQLSGD----IP 271 (704)
Q Consensus 205 l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~-----~~~~~l~~L~~L~l~~n~l~~~----~~ 271 (704)
-|.|+.+....|++..-.. ..|..-.+|+.+.+..|.|.-... ..+..+.+|+.|||..|-++-. +.
T Consensus 156 kp~Le~vicgrNRlengs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La 235 (388)
T COG5238 156 KPKLEVVICGRNRLENGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLA 235 (388)
T ss_pred CCCceEEEeccchhccCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHH
Confidence 6899999999999973221 123333689999999999873321 2334678999999999999743 33
Q ss_pred CCcCCCCCcceeeccCceeeccCCccc------ccccccceEEecccCCCCCCC
Q 005278 272 TTIGGLENLETLSLADNQFQGPVPKSF------GSLISLESLDLSRNNLSGEIP 319 (704)
Q Consensus 272 ~~~~~l~~L~~L~L~~n~l~~~~p~~~------~~l~~L~~L~l~~N~l~~~~p 319 (704)
..+..++.|+.|.+.+|-++.....++ ...|+|..|...+|...+.+-
T Consensus 236 ~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i 289 (388)
T COG5238 236 DALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGII 289 (388)
T ss_pred HHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCcee
Confidence 456778899999999999986555443 246888999999998876543
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.83 E-value=9.7e-08 Score=98.20 Aligned_cols=166 Identities=20% Similarity=0.237 Sum_probs=126.1
Q ss_pred ceEEEEEEE-CCCCEEEEEEeeccchhhhHHHHHHHHHHHhcCCCCCceEEeeeee----CCeEEEEEeccCC-CCHHHH
Q 005278 428 FGSVYKGTL-FDGTNVAIKVFNLQLERASRSFDSECEILRSIRHRNLIKIISNCCN----IDFKALVLEFMPN-GSLEKW 501 (704)
Q Consensus 428 ~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 501 (704)
..+.||+.. .||..+++|+++.........-..-+++++++.|+|+|++.+++.. ....++||+|.++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 357899974 4899999999965443333333456889999999999999998863 4467899999885 467665
Q ss_pred Hhh--------------CCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCC
Q 005278 502 LYS--------------HNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGE 567 (704)
Q Consensus 502 l~~--------------~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~ 567 (704)
-.. .+...++...|.++.|+..||.++ |+.|..-+-+.+++|+++.+.+++|+..|....+..
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sI---HssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSI---HSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHH---HhcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 431 234468889999999999999999 567888899999999999999999999888776543
Q ss_pred CCCcceeccccccccccCCcccCCCCCCcccceeeHHHHHHHHhhCCC
Q 005278 568 GDDSVIQTMTIATIGYMAPEYGSEGIISPKSDVYSYGILLMETFTRKK 615 (704)
Q Consensus 568 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~Gv~l~el~tg~~ 615 (704)
... |.+.+ -.+-|.=.||.+++.+.||..
T Consensus 446 d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 220 11111 236788899999999999864
No 493
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.81 E-value=4e-11 Score=126.33 Aligned_cols=127 Identities=28% Similarity=0.264 Sum_probs=72.7
Q ss_pred CCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCccccEEEecCcccCCCCCcccccCcCCcEEEee
Q 005278 183 GLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEYVLYINLSANSLNGSLPSNIQNLKVLTNLDLS 262 (704)
Q Consensus 183 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 262 (704)
.|...+.+.|.+. ....++.-++.|+.|+|++|+++.+. .+..+++|++|||++|.+....--....+. |+.|.++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 3555555666655 44444555566666666666665332 555666666666666666532222222333 6677777
Q ss_pred cCccCCCCCCCcCCCCCcceeeccCceeecc-CCcccccccccceEEecccCCC
Q 005278 263 RNQLSGDIPTTIGGLENLETLSLADNQFQGP-VPKSFGSLISLESLDLSRNNLS 315 (704)
Q Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L~l~~N~l~ 315 (704)
+|.++.. ..+.++.+|+.||+++|-|.+- --..+..+..|+.|+|.|||+.
T Consensus 241 nN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 7766522 2355666777777777766541 1233456667777777777775
No 494
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.77 E-value=1.2e-07 Score=94.07 Aligned_cols=139 Identities=12% Similarity=0.042 Sum_probs=98.1
Q ss_pred cccccCceEEEEEEECCCCEEEEEEeeccchh-----------hhHHHHHHHHHHHhcCCCC--CceEEeeeee-----C
Q 005278 422 LLGTGSFGSVYKGTLFDGTNVAIKVFNLQLER-----------ASRSFDSECEILRSIRHRN--LIKIISNCCN-----I 483 (704)
Q Consensus 422 ~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~-----~ 483 (704)
.+-+.....|++.++ +|+.+.||........ ....+.+|.+.+.++...+ ....+++... .
T Consensus 29 ~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 29 VFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred EEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 334344445667665 5788999977433211 1114778999998885333 3344555533 2
Q ss_pred CeEEEEEeccCCC-CHHHHHhhC-CCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCC-------CCcE
Q 005278 484 DFKALVLEFMPNG-SLEKWLYSH-NYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDE-------NMTA 554 (704)
Q Consensus 484 ~~~~lv~e~~~~g-sL~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~-------~~~~ 554 (704)
...++|||++++. +|.+++... ....+......++.+++..+.-| |..||+|+|++++||+++. +..+
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~L---H~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDM---HAAGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH---HHCcCccCCCChhhEEEeccccCCCCCceE
Confidence 3468999999886 898888532 22345567778999999999999 5689999999999999975 4689
Q ss_pred EEeeecccee
Q 005278 555 HVSDFGISKL 564 (704)
Q Consensus 555 kl~Dfgla~~ 564 (704)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998864
No 495
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.73 E-value=2.5e-09 Score=101.65 Aligned_cols=188 Identities=20% Similarity=0.205 Sum_probs=115.5
Q ss_pred cCCCCCEEEccCCcCcc--ccChhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccC-CccccCcCCC
Q 005278 132 NLSGMIVFDLNGCDLNG--TIPTAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHV-PPCLASLTSL 208 (704)
Q Consensus 132 ~l~~L~~L~L~~n~l~~--~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~-~~~~~~l~~L 208 (704)
.++.+++|||.+|.|+. .+...+.++|.|+.|+|+.|++...+-..-..+.+|+.|.|.+..+.... ...+..+|.+
T Consensus 69 ~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~lP~v 148 (418)
T KOG2982|consen 69 SVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSDIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDDLPKV 148 (418)
T ss_pred HhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCccccCcccccceEEEEEcCCCCChhhhhhhhhcchhh
Confidence 34566677777777662 33445566777777777777776433211135667888888777766332 2356677788
Q ss_pred CEEEecCccCCCCC--CCcccCC-ccccEEEecCcccCC--CCCcccccCcCCcEEEeecCccCCCC-CCCcCCCCCcce
Q 005278 209 RRLHLGSNKLTSTM--PSSFGSL-EYVLYINLSANSLNG--SLPSNIQNLKVLTNLDLSRNQLSGDI-PTTIGGLENLET 282 (704)
Q Consensus 209 ~~L~l~~n~l~~~~--~~~~~~l-~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~l~~L~~ 282 (704)
+.|+++.|.+.... .+..... +.++.|++..|.... ..-.--.-+|++..+-+..|++...- -..+..++.+..
T Consensus 149 telHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~p~~~~ 228 (418)
T KOG2982|consen 149 TELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPFPSLSC 228 (418)
T ss_pred hhhhhccchhhhhccccccccccchhhhhhhcCCcHHHHHHHHHhHHhhcccchheeeecCcccchhhcccCCCCCcchh
Confidence 88888888544221 2222222 245555555554320 11111123567888888888886433 234556777788
Q ss_pred eeccCceeec-cCCcccccccccceEEecccCCCCCCC
Q 005278 283 LSLADNQFQG-PVPKSFGSLISLESLDLSRNNLSGEIP 319 (704)
Q Consensus 283 L~L~~n~l~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p 319 (704)
|+|+.|+|.. .-.+.+..++.|..|.+++||+.....
T Consensus 229 LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~ 266 (418)
T KOG2982|consen 229 LNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLR 266 (418)
T ss_pred hhhcccccccHHHHHHHcCCchhheeeccCCccccccc
Confidence 8999998874 223567788899999999999875544
No 496
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.70 E-value=1.2e-07 Score=90.38 Aligned_cols=132 Identities=23% Similarity=0.220 Sum_probs=94.2
Q ss_pred ccccccccCceEEEEEEECCCCEEEEEEeeccc----------------------hhhhHHHHHHHHHHHhcCCC--CCc
Q 005278 419 ECNLLGTGSFGSVYKGTLFDGTNVAIKVFNLQL----------------------ERASRSFDSECEILRSIRHR--NLI 474 (704)
Q Consensus 419 ~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--niv 474 (704)
+...||.|.-+.||.|..++|.++|||.=+... .......++|.++|+++... .+.
T Consensus 95 iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP 174 (304)
T COG0478 95 IGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVP 174 (304)
T ss_pred hccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCC
Confidence 457899999999999999999999999642210 01223467899999999655 666
Q ss_pred eEEeeeeeCCeEEEEEeccCCCCHHHHHhhCCCccCHHHHHHHHHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcE
Q 005278 475 KIISNCCNIDFKALVLEFMPNGSLEKWLYSHNYFLGILERLNIMIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTA 554 (704)
Q Consensus 475 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~ 554 (704)
+.+++ +...+||||+++-.|...- ++....-.++..|..-+.-. -..||||+|+++-||+++++|.+
T Consensus 175 ~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~---~~~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 175 KPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKA---YRRGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred Ccccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHH---HHcCccccCCchheEEEecCCCE
Confidence 66665 3457999999886654422 12233334444454444444 23679999999999999999999
Q ss_pred EEeeeccce
Q 005278 555 HVSDFGISK 563 (704)
Q Consensus 555 kl~Dfgla~ 563 (704)
.++||--+.
T Consensus 242 ~vIDwPQ~v 250 (304)
T COG0478 242 VVIDWPQAV 250 (304)
T ss_pred EEEeCcccc
Confidence 999996554
No 497
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.67 E-value=6.4e-09 Score=98.93 Aligned_cols=81 Identities=17% Similarity=0.270 Sum_probs=39.7
Q ss_pred ccccEEEecCcccCCCC-CcccccCcCCcEEEeecCccCC-CCCCCcCCCCCcceeeccCceeeccCCc------ccccc
Q 005278 230 EYVLYINLSANSLNGSL-PSNIQNLKVLTNLDLSRNQLSG-DIPTTIGGLENLETLSLADNQFQGPVPK------SFGSL 301 (704)
Q Consensus 230 ~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~~~p~------~~~~l 301 (704)
|++..+-+..|.++... -..+..++.+..|+|+.|+|.. .-.+++.++++|..|.+++|.+.+.+.. -++.+
T Consensus 199 pnv~sv~v~e~PlK~~s~ek~se~~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~~err~llIaRL 278 (418)
T KOG2982|consen 199 PNVNSVFVCEGPLKTESSEKGSEPFPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRGGERRFLLIARL 278 (418)
T ss_pred ccchheeeecCcccchhhcccCCCCCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccCCcceEEEEeec
Confidence 34444444444443211 1122334444455555555542 1123455566666666666665543322 24678
Q ss_pred cccceEEec
Q 005278 302 ISLESLDLS 310 (704)
Q Consensus 302 ~~L~~L~l~ 310 (704)
++++.|+=+
T Consensus 279 ~~v~vLNGs 287 (418)
T KOG2982|consen 279 TKVQVLNGS 287 (418)
T ss_pred cceEEecCc
Confidence 888887654
No 498
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.66 E-value=2.9e-10 Score=120.00 Aligned_cols=154 Identities=24% Similarity=0.248 Sum_probs=64.8
Q ss_pred CCCCCCCcEEEccCCCCcccCChhhhhcccccceEEecCCccc---ccCChhhhcC------CCCCEEEccCCcCccccC
Q 005278 81 LTNCRNLTVLGLASNPLRGILPPLIGNFSASLQEFYAYGCKLR---GNIPQEIGNL------SGMIVFDLNGCDLNGTIP 151 (704)
Q Consensus 81 ~~~l~~L~~L~L~~n~i~~~~~~~~~~~~~~L~~L~l~~n~l~---~~~~~~~~~l------~~L~~L~L~~n~l~~~~~ 151 (704)
+..+++|+.|.|.++++... ..+-.+-.+|++|...+ .+. ..+....+.. ..|.+.+++.|.+. ..-
T Consensus 105 ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~-Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~mD 180 (1096)
T KOG1859|consen 105 IFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHN-SLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-LMD 180 (1096)
T ss_pred eccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhc-cHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-hHH
Confidence 45566777777777776642 22222222344443221 111 0011111111 12444444444444 333
Q ss_pred hhhcCCCCcCeeeccCcccCCCCCccccCCCCCCEEEcCCCcCCccCCccccCcCCCCEEEecCccCCCCCCCcccCCcc
Q 005278 152 TAVGRLRRLQGLYLHGNKLQGSIPYDLCHLEGLSELNLNGNKLCGHVPPCLASLTSLRRLHLGSNKLTSTMPSSFGSLEY 231 (704)
Q Consensus 152 ~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~ 231 (704)
.++.-++.|+.|+|+.|+++.. +.+..+++|++|||+.|.+. .+|..-..--.|+.|.|++|.++. ...+.++.+
T Consensus 181 ~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~L~~L~lrnN~l~t--L~gie~Lks 255 (1096)
T KOG1859|consen 181 ESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGCKLQLLNLRNNALTT--LRGIENLKS 255 (1096)
T ss_pred HHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhhhheeeeecccHHHh--hhhHHhhhh
Confidence 3444445555555555555422 24444455555555555554 333211111124555555554441 123334444
Q ss_pred ccEEEecCcccC
Q 005278 232 VLYINLSANSLN 243 (704)
Q Consensus 232 L~~L~l~~N~l~ 243 (704)
|+.||+++|-|.
T Consensus 256 L~~LDlsyNll~ 267 (1096)
T KOG1859|consen 256 LYGLDLSYNLLS 267 (1096)
T ss_pred hhccchhHhhhh
Confidence 444444444443
No 499
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.65 E-value=1.5e-08 Score=107.95 Aligned_cols=152 Identities=19% Similarity=0.255 Sum_probs=102.4
Q ss_pred HHHHHHHHHHHHhcCCCCcEecCCCCCCeeeCCCCcEEEeeeccceecCCCCCcc-------eeccccccccccCCcccC
Q 005278 518 MIDVGLALEYLHHGHSTPMVHCDLKPNNILLDENMTAHVSDFGISKLLGEGDDSV-------IQTMTIATIGYMAPEYGS 590 (704)
Q Consensus 518 ~~~i~~~l~~Lh~~h~~~ivH~dlk~~Nil~~~~~~~kl~Dfgla~~~~~~~~~~-------~~~~~~gt~~y~aPE~~~ 590 (704)
+.+++.|+.|+|. +.++||++|.|++|.+++.+..||+.|+.+.......... ..........|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3455689999984 5789999999999999999999999999887654321110 111123456799999999
Q ss_pred CCCCCcccceeeHHHHHHHHhhCCCCCCccccccccHHHHHHhhcCCCcchhccccchhhhhhhhhhHHHHHHHHHHHhh
Q 005278 591 EGIISPKSDVYSYGILLMETFTRKKPTNEIFIGEMSLKHWVKESLPDGLTEVVDANLVREEQAFSVKIDCLLSIMHLALD 670 (704)
Q Consensus 591 ~~~~~~~~Dv~s~Gv~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 670 (704)
+...+.++|+||+||.+|.+..|+.+--........+.. ... ..+ . .........+.++.+-+.+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~-~~~--~~~------~------~~~~~s~~~p~el~~~l~k 247 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSF-SRN--LLN------A------GAFGYSNNLPSELRESLKK 247 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhh-hhc--ccc------c------ccccccccCcHHHHHHHHH
Confidence 999999999999999999999655543221111111111 000 000 0 0111113456677888889
Q ss_pred hcCCCCCCCCCHHHHH
Q 005278 671 CCMESPEQRVSMKDAA 686 (704)
Q Consensus 671 cl~~~P~~Rpt~~ev~ 686 (704)
.+..++.-||++.++.
T Consensus 248 ~l~~~~~~rp~~~~l~ 263 (700)
T KOG2137|consen 248 LLNGDSAVRPTLDLLL 263 (700)
T ss_pred HhcCCcccCcchhhhh
Confidence 9999999999776664
No 500
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.58 E-value=2.1e-09 Score=102.21 Aligned_cols=177 Identities=21% Similarity=0.216 Sum_probs=109.9
Q ss_pred CCCEEecCCCcCcc-cCCccccCCCCCCEEeccCccccccCchhhcCCCCCCEEeccccc-CCCcccchhhcccccCCCC
Q 005278 7 NLKYLTLFDNKLSG-TIPNSITNASKLIMLDLSSNSFSGLIPNTFGNLGSLQVLSLAYNY-LMTESSAAKWNFLSSLTNC 84 (704)
Q Consensus 7 ~l~~L~l~~~~i~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~-i~~~~~~~~~~~~~~~~~l 84 (704)
.|++|||++..|+. .+..-++.+..|+.|.|.++.+.+-+...+++-.+|+.|||+.+. ++.-.. --.+.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~------~ll~~sc 259 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENAL------QLLLSSC 259 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHH------HHHHHhh
Confidence 47788888888872 233345668888888888988888888888888888999988764 333221 1236788
Q ss_pred CCCcEEEccCCCCccc-CChhhhhcccccceEEecCCccc---ccCChhhhcCCCCCEEEccCCc-CccccChhhcCCCC
Q 005278 85 RNLTVLGLASNPLRGI-LPPLIGNFSASLQEFYAYGCKLR---GNIPQEIGNLSGMIVFDLNGCD-LNGTIPTAVGRLRR 159 (704)
Q Consensus 85 ~~L~~L~L~~n~i~~~-~~~~~~~~~~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~ 159 (704)
+.|.+|+|++|.+... ....+++..++|+.|+|+++.-. ..+..-...+++|.+|||++|. ++......|..++.
T Consensus 260 s~L~~LNlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf~~ 339 (419)
T KOG2120|consen 260 SRLDELNLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKFNY 339 (419)
T ss_pred hhHhhcCchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhcch
Confidence 8888888888876533 34555666667777777765422 1222233456666677776654 33223334555566
Q ss_pred cCeeeccCcccCCCCCcc---ccCCCCCCEEEcCC
Q 005278 160 LQGLYLHGNKLQGSIPYD---LCHLEGLSELNLNG 191 (704)
Q Consensus 160 L~~L~L~~n~l~~~~~~~---l~~l~~L~~L~L~~ 191 (704)
|++|.++.|.. .+|.. +...++|.+|+.-+
T Consensus 340 L~~lSlsRCY~--i~p~~~~~l~s~psl~yLdv~g 372 (419)
T KOG2120|consen 340 LQHLSLSRCYD--IIPETLLELNSKPSLVYLDVFG 372 (419)
T ss_pred heeeehhhhcC--CChHHeeeeccCcceEEEEecc
Confidence 66666666553 23432 22334455555443
Done!