Query 005279
Match_columns 704
No_of_seqs 316 out of 1686
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 20:56:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005279.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005279hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0228 Beta-fructofuranosidas 100.0 2E-123 5E-128 1003.0 35.4 522 110-656 41-570 (571)
2 COG1621 SacC Beta-fructosidase 100.0 1.2E-96 3E-101 815.5 45.5 446 117-655 27-486 (486)
3 TIGR01322 scrB_fam sucrose-6-p 100.0 4.2E-89 9E-94 761.7 46.9 413 117-624 12-445 (445)
4 smart00640 Glyco_32 Glycosyl h 100.0 9.1E-87 2E-91 741.3 47.7 423 123-613 1-437 (437)
5 PF00251 Glyco_hydro_32N: Glyc 100.0 2.6E-77 5.7E-82 637.1 28.1 299 123-441 1-308 (308)
6 cd08996 GH32_B_Fructosidase Gl 100.0 3E-67 6.6E-72 554.4 33.5 286 129-444 1-298 (298)
7 cd08995 GH32_Aec43_like Glycos 100.0 2.4E-54 5.3E-59 452.6 30.3 266 132-434 1-278 (280)
8 cd08979 GH_J Glycosyl hydrolas 100.0 6E-38 1.3E-42 324.6 26.5 242 133-406 8-264 (276)
9 cd08772 GH43_62_32_68 Glycosyl 100.0 2.8E-35 6.1E-40 304.5 27.4 268 132-427 1-285 (286)
10 cd08997 GH68 Glycosyl hydrolas 99.9 2.7E-25 5.8E-30 240.0 23.9 193 132-343 8-255 (349)
11 cd08994 GH43_like_2 Glycosyl h 99.9 4E-21 8.6E-26 202.7 19.9 190 122-320 4-283 (291)
12 cd08984 GH43_5 Glycosyl hydrol 99.8 4.7E-19 1E-23 188.1 20.7 185 108-319 51-246 (294)
13 cd08993 GH43_DUF377 Glycosyl h 99.8 1.6E-18 3.4E-23 181.4 20.3 160 133-314 2-169 (268)
14 cd09004 GH43_bXyl Glycosyl hyd 99.8 4.2E-18 9.2E-23 178.5 20.0 192 128-354 5-197 (275)
15 cd08999 GH43_ABN_2 Glycosyl hy 99.7 1.3E-15 2.8E-20 159.9 21.9 195 129-354 6-211 (287)
16 cd08990 GH43_AXH_like Glycosyl 99.6 1.4E-14 3.1E-19 151.9 20.5 195 133-354 2-206 (274)
17 cd08978 GH_F Glycosyl hydrolas 99.6 1.3E-13 2.8E-18 142.3 20.5 191 133-354 2-201 (271)
18 cd08991 GH43_bXyl_2 Glycosyl h 99.5 5.9E-13 1.3E-17 140.8 20.6 188 133-353 2-212 (294)
19 cd08998 GH43_ABN_1 Glycosyl hy 99.5 3.7E-12 8.1E-17 134.6 21.2 129 131-276 1-137 (288)
20 cd08992 GH43_like_1 Glycosyl h 99.5 1.4E-12 2.9E-17 141.6 17.9 170 119-296 24-240 (349)
21 cd08984 GH43_5 Glycosyl hydrol 99.4 1.4E-11 3.1E-16 130.9 19.0 169 131-319 11-193 (294)
22 PF11837 DUF3357: Domain of un 99.4 6E-14 1.3E-18 128.1 -1.1 94 6-115 5-106 (106)
23 cd08985 GH43_6 Glycosyl hydrol 99.3 2.7E-10 5.9E-15 119.7 21.7 197 133-365 5-211 (265)
24 cd08979 GH_J Glycosyl hydrolas 99.3 4.7E-11 1E-15 123.8 15.4 158 108-276 37-209 (276)
25 PF04041 DUF377: Domain of unk 99.2 8.6E-11 1.9E-15 126.5 13.8 159 136-312 36-201 (312)
26 PF04616 Glyco_hydro_43: Glyco 99.2 1E-09 2.2E-14 114.9 21.5 185 129-347 8-202 (286)
27 PF08244 Glyco_hydro_32C: Glyc 99.2 3.9E-11 8.5E-16 104.8 8.7 78 514-613 9-86 (86)
28 cd09000 GH43_XYL_1 Glycosyl hy 99.2 1.2E-09 2.6E-14 115.7 20.7 178 129-344 6-196 (288)
29 cd08983 GH43_4 Glycosyl hydrol 99.2 2.7E-09 5.8E-14 113.0 22.7 181 129-343 16-206 (276)
30 cd09003 GH43_AXH_1 Glycosyl hy 99.2 1.7E-09 3.7E-14 116.3 20.2 186 129-344 7-215 (311)
31 cd08992 GH43_like_1 Glycosyl h 99.0 6E-09 1.3E-13 113.5 17.9 192 108-318 83-309 (349)
32 cd08988 GH43_ABN Glycosyl hydr 99.0 4.2E-08 9.1E-13 103.8 19.8 129 133-276 2-139 (279)
33 cd08981 GH43_2 Glycosyl hydrol 98.9 5.6E-08 1.2E-12 103.7 20.0 135 129-275 4-142 (291)
34 cd08989 GH43_XYL Glycosyl hydr 98.8 4E-07 8.6E-12 96.0 19.9 125 129-275 6-136 (269)
35 cd08980 GH43_1 Glycosyl hydrol 98.8 4.6E-07 9.9E-12 96.0 19.7 187 133-354 2-204 (288)
36 cd08993 GH43_DUF377 Glycosyl h 98.7 8.2E-08 1.8E-12 100.7 12.1 98 194-300 3-104 (268)
37 cd09001 GH43_XYL_2 Glycosyl hy 98.7 4.7E-07 1E-11 95.4 17.8 170 129-345 9-192 (269)
38 PF02435 Glyco_hydro_68: Levan 98.7 5.8E-07 1.3E-11 99.5 18.6 185 132-320 63-310 (428)
39 cd08986 GH43_7 Glycosyl hydrol 98.7 9E-07 2E-11 93.3 17.8 130 130-275 1-150 (269)
40 cd08987 GH62 Glycosyl hydrolas 98.5 3.6E-06 7.9E-11 89.2 17.9 211 116-366 6-230 (303)
41 cd08994 GH43_like_2 Glycosyl h 98.5 7.9E-07 1.7E-11 94.1 12.9 107 133-244 82-198 (291)
42 cd09002 GH43_XYL_3 Glycosyl hy 98.5 1.1E-06 2.4E-11 93.3 13.3 121 130-275 14-134 (280)
43 COG2152 Predicted glycosylase 98.5 9.8E-07 2.1E-11 93.3 12.6 146 136-302 35-193 (314)
44 cd08995 GH32_Aec43_like Glycos 98.5 2E-06 4.4E-11 90.5 15.2 156 108-277 34-201 (280)
45 cd08978 GH_F Glycosyl hydrolas 98.5 4.9E-06 1.1E-10 86.0 16.1 155 128-296 56-214 (271)
46 cd08982 GH43_3 Glycosyl hydrol 98.4 9.8E-06 2.1E-10 86.8 18.0 108 132-276 4-111 (295)
47 cd08983 GH43_4 Glycosyl hydrol 98.4 2.2E-06 4.9E-11 90.8 11.9 91 239-345 4-100 (276)
48 cd08999 GH43_ABN_2 Glycosyl hy 98.3 1.6E-05 3.6E-10 83.6 16.8 173 112-298 38-226 (287)
49 cd08772 GH43_62_32_68 Glycosyl 98.3 2E-05 4.2E-10 81.8 15.8 156 129-296 58-223 (286)
50 PF04041 DUF377: Domain of unk 98.2 5.8E-06 1.3E-10 89.4 10.6 108 187-302 28-137 (312)
51 cd08991 GH43_bXyl_2 Glycosyl h 98.2 5.2E-05 1.1E-09 80.4 17.1 170 114-297 33-227 (294)
52 cd08990 GH43_AXH_like Glycosyl 98.2 4.3E-05 9.3E-10 80.4 16.3 149 129-298 62-217 (274)
53 cd08996 GH32_B_Fructosidase Gl 98.2 2E-05 4.3E-10 83.7 13.4 157 108-277 36-202 (298)
54 cd08986 GH43_7 Glycosyl hydrol 98.2 1.5E-05 3.4E-10 84.0 12.2 121 255-400 2-147 (269)
55 cd08998 GH43_ABN_1 Glycosyl hy 98.0 0.00018 3.9E-09 76.3 17.1 149 130-292 57-213 (288)
56 PF04616 Glyco_hydro_43: Glyco 98.0 0.00015 3.3E-09 75.9 15.3 171 112-296 41-221 (286)
57 TIGR01322 scrB_fam sucrose-6-p 97.8 0.00022 4.8E-09 80.7 13.9 157 108-276 59-225 (445)
58 cd09002 GH43_XYL_3 Glycosyl hy 97.8 0.0002 4.2E-09 76.2 12.7 79 240-345 7-85 (280)
59 cd08989 GH43_XYL Glycosyl hydr 97.7 0.00015 3.2E-09 76.6 9.8 78 241-344 1-87 (269)
60 cd08981 GH43_2 Glycosyl hydrol 97.7 0.00046 1E-08 73.8 13.6 78 253-345 4-88 (291)
61 smart00640 Glyco_32 Glycosyl h 97.7 0.00035 7.6E-09 78.9 12.5 159 107-276 41-215 (437)
62 cd08997 GH68 Glycosyl hydrolas 97.6 0.0019 4.1E-08 71.0 16.0 174 108-292 45-279 (349)
63 cd09004 GH43_bXyl Glycosyl hyd 97.5 0.0059 1.3E-07 64.3 18.4 138 133-298 68-212 (275)
64 PF13088 BNR_2: BNR repeat-lik 97.4 0.014 3E-07 60.9 19.8 181 117-319 32-217 (275)
65 cd08988 GH43_ABN Glycosyl hydr 97.3 0.0081 1.8E-07 63.7 16.6 143 132-291 58-213 (279)
66 cd08985 GH43_6 Glycosyl hydrol 97.3 0.0083 1.8E-07 63.3 16.3 140 137-299 70-214 (265)
67 COG2152 Predicted glycosylase 97.3 0.0011 2.4E-08 70.7 9.0 105 190-303 30-141 (314)
68 cd08980 GH43_1 Glycosyl hydrol 97.2 0.0074 1.6E-07 64.0 14.5 145 126-276 108-260 (288)
69 cd00260 Sialidase Sialidases o 97.2 0.012 2.5E-07 64.0 16.1 167 116-299 59-240 (351)
70 cd09001 GH43_XYL_2 Glycosyl hy 97.1 0.011 2.4E-07 62.5 15.1 127 133-292 78-207 (269)
71 cd09003 GH43_AXH_1 Glycosyl hy 96.9 0.031 6.6E-07 60.5 16.3 168 113-301 55-248 (311)
72 COG3507 XynB Beta-xylosidase [ 96.8 0.014 3E-07 66.9 13.5 141 163-320 56-216 (549)
73 cd09000 GH43_XYL_1 Glycosyl hy 96.8 0.034 7.3E-07 59.1 15.9 142 132-296 69-218 (288)
74 PF13088 BNR_2: BNR repeat-lik 96.2 0.1 2.2E-06 54.3 14.6 161 142-319 1-168 (275)
75 PF03664 Glyco_hydro_62: Glyco 96.2 0.4 8.6E-06 50.1 17.9 213 117-367 9-230 (271)
76 cd08982 GH43_3 Glycosyl hydrol 95.8 0.089 1.9E-06 56.6 11.8 135 127-273 87-237 (295)
77 PF00251 Glyco_hydro_32N: Glyc 95.7 0.21 4.5E-06 53.9 14.5 140 108-261 42-190 (308)
78 cd08987 GH62 Glycosyl hydrolas 94.9 0.99 2.2E-05 48.7 16.0 142 133-297 80-230 (303)
79 cd00260 Sialidase Sialidases o 94.0 9.3 0.0002 41.4 21.7 146 159-319 45-207 (351)
80 PF13859 BNR_3: BNR repeat-lik 92.3 0.63 1.4E-05 50.7 9.2 87 194-298 124-213 (310)
81 COG3940 Predicted beta-xylosid 87.1 3.8 8.2E-05 42.3 9.2 113 130-246 131-248 (324)
82 PTZ00334 trans-sialidase; Prov 86.7 5 0.00011 48.8 11.5 123 157-299 215-351 (780)
83 PF13810 DUF4185: Domain of un 69.0 1.1E+02 0.0024 33.6 14.2 157 133-301 96-276 (316)
84 PF13810 DUF4185: Domain of un 64.9 27 0.00059 38.2 8.5 96 198-299 101-211 (316)
85 COG3507 XynB Beta-xylosidase [ 56.3 10 0.00022 44.2 3.5 53 240-302 22-74 (549)
86 PF02435 Glyco_hydro_68: Levan 34.1 7.9E+02 0.017 28.4 15.2 128 141-277 143-320 (428)
87 PF03664 Glyco_hydro_62: Glyco 32.9 3.8E+02 0.0081 28.8 10.2 113 171-302 7-123 (271)
88 COG1621 SacC Beta-fructosidase 28.4 4.5E+02 0.0098 30.8 11.0 119 111-238 77-204 (486)
89 PF10898 DUF2716: Protein of u 26.7 42 0.00092 32.7 2.0 37 114-150 80-120 (143)
90 PF06439 DUF1080: Domain of Un 21.0 4.6E+02 0.01 25.2 8.2 53 595-650 130-184 (185)
91 KOG0228 Beta-fructofuranosidas 20.8 3.3E+02 0.0071 32.1 7.8 40 200-246 68-110 (571)
No 1
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.5e-123 Score=1003.03 Aligned_cols=522 Identities=49% Similarity=0.864 Sum_probs=483.7
Q ss_pred CCCcccccccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCC
Q 005279 110 WTNNMLSWQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIM 189 (704)
Q Consensus 110 ~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~ 189 (704)
|++...+++||.|||||++|||||| +|++|+|||||||||.+++||+++||||||+|||||+.+|+||.|++++|.+
T Consensus 41 ~~~~~n~~~Rp~~HFqP~k~wMN~P---~~ykG~yHLFyQyNP~gavwg~ivWGHavSkDLinW~~lp~Ai~Ps~~~din 117 (571)
T KOG0228|consen 41 PSNTVNQPDRPGFHFQPPKGWMNDP---MYYKGKYHLFYQYNPKGAVWGNIVWGHAVSKDLINWEALPPAIAPSEWFDIN 117 (571)
T ss_pred ccccccccCCceeecCCCcccccCc---cccCcEEEEEEecCCCCceeeeeEeeeecchhhccccccCcccCCCCccccC
Confidence 5677778999999999999999988 9999999999999999999999999999999999999999999999999999
Q ss_pred cEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC--CCCCCcCccCCeeEEecCCC
Q 005279 190 GVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDPTTAWLTSEG 267 (704)
Q Consensus 190 Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP~Vvw~~~~g 267 (704)
|||||||+++++|+.++||||...+..|+|.+|++.|.+||.|++|.|.++||++.++ .++....||||+|+|++++|
T Consensus 118 g~wSGSati~~~~~~vilytg~d~~~rqVqn~a~p~d~sdp~l~~w~k~~gnp~~~p~~V~~in~s~FRDPttaW~~~dg 197 (571)
T KOG0228|consen 118 GCWSGSATIDPNNSPVILYTGIDPNNRQVQNYAYPKDVSDPQLIAWSKDGGNPFMKPDKVLGINSSQFRDPTTAWFGQDG 197 (571)
T ss_pred ccccceEEEccCCCeEEEecccCcCceEEEEEeccCCCCchhhheeecCCCceeeccccccCCChhhccCCceeeecCCC
Confidence 9999999999999999999999988889999999999999999999999999999988 78888999999999999999
Q ss_pred eEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 268 KWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 268 ~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
+|+|++|++.+++|.+++|+|+||++|+....++|....+||||||||||++.++.+|++.+..|+..|||+++|+++++
T Consensus 198 kWrm~vgsk~~q~g~a~~Y~S~Df~~W~k~~~~~h~~~~tgmwECPdffpVs~tg~~g~d~s~~~~~nkhvlkasl~gt~ 277 (571)
T KOG0228|consen 198 KWRMTVGSKIKQRGKAIIYSSDDFKHWTKSSVPLHSGDLTGMWECPDFFPVSITGTDGLDWSLFGSINKHVLKASLGGTS 277 (571)
T ss_pred cEEEEEEeecCccceEEEEeccchhhhhcccccccccCccceEECCCcEEecccCCCCceEEEeccccccccccccCCce
Confidence 99999999988889999999999999999999999888889999999999999999999999999888999999999999
Q ss_pred ceEEEEEEeeCCceeeecCCCccccccceeeccCCCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEE
Q 005279 348 HDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTV 427 (704)
Q Consensus 348 ~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel 427 (704)
+++|+||+||+++.+|+|++...++..++|+|||+|||+|||+|..++|||+|||++|+++..++.++||+|+|+|||++
T Consensus 278 ~d~Y~IG~yd~~~~~fvpd~~~~~~~~dlr~Dyg~~YASkTFfds~~~rrIlwgWa~es~~~~dd~~kgw~g~qtipRki 357 (571)
T KOG0228|consen 278 NDQYFIGTYDGEKDTFVPDDGFSRVSVDLRYDYGKYYASKTFFDSVKGRRILWGWASESDYTNDDPTKGWRGLQTIPRKI 357 (571)
T ss_pred eEEEEEecccCCcceeeccCCcccccccccccchhhhhhhhhccccCCcEEEEEecccCcccccchhcccccccccceEE
Confidence 99999999999889999999888877788999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhc--cc---ccceeeec
Q 005279 428 ALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKT--AE---SNVEFSCS 502 (704)
Q Consensus 428 ~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~--~~---~~~~~~~~ 502 (704)
.|++..|..|.|||++|+|.||.......+..+++|+..+....++.|.|++++|++. .||.. .+ ++-.+.|.
T Consensus 358 ~Ld~~s~k~l~qwpv~eie~Lr~~~v~~~~~~~~~g~~~~v~~~t~~q~dvev~f~~~--~Leka~~~~~~~t~~~~~c~ 435 (571)
T KOG0228|consen 358 WLDTESGKQLTQWPVEEIEPLRLSNVKMDNKLFKPGSLNEVSGITAAQADVEVTFEVE--DLEKAIVIEPSWTDPQFLCL 435 (571)
T ss_pred EeeccCCCcccccchheeecccccccCccccccCCceeEEecccccccccceEEEEec--ccccccccCccccccceeee
Confidence 9998678899999999999999988776777889999999999999999999999886 34432 11 22357798
Q ss_pred CCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCcccccc-ccccceeeEeecCcchhhh
Q 005279 503 SSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILN-ESIGEHISCYCPNEHMYML 581 (704)
Q Consensus 503 ~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~-~~~G~~~~~~~Pv~~~~~~ 581 (704)
+ +++..++.+|||||.++++.+++|+|+++|.+.|.+. ...+.+|.|..|||++.|.. ..+|. .+++
T Consensus 436 ~-~~~~v~~~~gpfgl~~la~~dl~eyt~v~f~i~k~~~-~~~v~~csd~~~sSl~~d~~k~~~~a----fvdv------ 503 (571)
T KOG0228|consen 436 T-GGSSVREGLGPFGLMVLASSDLEEYTPVGFRIFKAKK-KYVVLMCSDQSRSSLAEDNYKPSIGA----FVDV------ 503 (571)
T ss_pred c-CCcccccCCCcceEEEEeecCcccceeeeEEEeecCC-cceeEEeccCCCccccccccccceee----EEEe------
Confidence 8 7788899999999999999999999999999999876 56778999999999998886 77787 7887
Q ss_pred hccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeecccc
Q 005279 582 ALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNSA 656 (704)
Q Consensus 582 ~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s~ 656 (704)
...++ ++||+||||||||.|+|+||+|+|+||||+.++..++.+|+||+|.......++.+|+|+++
T Consensus 504 -~~~~~-------islr~LiDhsivEsyg~~G~t~iTsrvyp~~ai~~~~~lf~fn~g~~~v~v~sl~aw~m~~~ 570 (571)
T KOG0228|consen 504 -YPHQK-------ISLRSLIDHSIVESYGNGGKTVITSRVYPTLAIGEGAHLFVFNNGSQLVNVTSLNAWSMKNA 570 (571)
T ss_pred -cCCCc-------cchhhhhhhhhHHHhccCCcEEEEeeeeeeecccccceEEEecccccceEEEEeehhhcccC
Confidence 34677 99999999999999999999999999999999999999999999887655559999999886
No 2
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-96 Score=815.53 Aligned_cols=446 Identities=33% Similarity=0.611 Sum_probs=354.8
Q ss_pred cccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeE
Q 005279 117 WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
-+||.|||+||.||||||||++|++|+|||||||||+++.||++|||||+|+|||||+++|+||.|+.+||.+|||||||
T Consensus 27 ~~Rp~yHftP~~G~mNDPNG~iy~~G~yHlFYQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~piaL~Pd~~~d~~g~ySGSA 106 (486)
T COG1621 27 PYRPQYHFTPPTGWLNDPNGLIYFDGKYHLFYQYNPFGAAHGPKHWGHAVSKDLVHWEHLPIALAPDDDYDSHGCYSGSA 106 (486)
T ss_pred CCCceeeecCCcCceECCCceeEECCEEEEEEecCCCCCCCCCceeeeeccCCcccceECCceecCCCccccCCceeeeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 197 TILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
|+ .+|.+.+||||+.+ .+.|.||+|+|+|+ .+|+|+.+|||+..|+++ +.|||||||+| +++|+|+|+
T Consensus 107 V~-~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg-----~~f~K~~~~~i~~~p~~~-t~hFRDPKv~w-~~~~~~~~m 178 (486)
T COG1621 107 VV-DDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDG-----GTFEKYSGNPIIDQPEGY-TPHFRDPKVVW-DEGGKWWMM 178 (486)
T ss_pred EE-eCCcEEEEEccceeccCCcceeEEEEEEEcCC-----CceEeccCCceecCCCcc-cccCCCCcccc-cCCCcEEEE
Confidence 75 68999999999975 35689999999995 789998789999999988 79999999999 578899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccCCCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC----
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGVPNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD---- 346 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~---- 346 (704)
+|++. +..|.+++|+|+||++|++.++|..+..+. +||||||||+|++.. .+ .+|++..+.++.
T Consensus 179 lgAq~~~~~g~i~lY~S~DL~~W~~~g~~~~~~~~~gym~ECPdlf~l~~~~--~~--------~~~pqg~~~~~~~~~n 248 (486)
T COG1621 179 LGAQGEDLKGTILLYESDDLKNWQFTGEFGLEQGGLGYMWECPDLFELDGED--VL--------LFWPQGLSINGGEYDN 248 (486)
T ss_pred EEEecCCCCceEEEEeCCCccCcEEEEeeccCCCceeeEEECCCeEEecCcC--ce--------EEcceeeecCCCcCCC
Confidence 99986 668999999999999999999998763444 499999999999754 23 344444554432
Q ss_pred -CceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCc--cccccCCCCCCCC
Q 005279 347 -RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSE--IADVKKGWASLQG 422 (704)
Q Consensus 347 -~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~--~~~~~~gWag~ls 422 (704)
....|++|+||++ +|++.... ..+||+| +|||+|||.++ ++|||++|||++|+.. .|+...||+||||
T Consensus 249 ~~~~~Y~vG~~dg~--~f~~~~~~-----~~~LD~G~DfYApQtf~~~-dgrri~igWmg~w~~~~~~PT~~~~w~~~mT 320 (486)
T COG1621 249 IYQSGYFVGDFDGK--EFKLDDGQ-----FRELDFGFDFYAPQTFLDP-DGRRILIGWMGNWDYTNNYPTIDEGWRGAMT 320 (486)
T ss_pred cceeEEEEEeeccc--eeEecCCC-----ceecccCccccceeeccCC-CCCEEEEEeccCccccCCCCccccCcCccce
Confidence 3467999999997 56655542 3589999 89999999995 8999999999999987 6677789999999
Q ss_pred ccEEEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccccceeeec
Q 005279 423 IPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAESNVEFSCS 502 (704)
Q Consensus 423 lPRel~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~ 502 (704)
|||||+|. +| +|+|+|++||++||.....+.++.+... ..+....+.++++...+.. .|.
T Consensus 321 lpRel~l~--~~-~L~Q~Pi~~l~~lr~~~~~~~~~~~~~~--~~l~~~~~~~~~l~~~~~~---------------~~~ 380 (486)
T COG1621 321 LPRELTLE--DG-KLYQTPVRELESLRKPEEAAHNTTLSGN--SKLELPSGDAYELDLDLIW---------------TDA 380 (486)
T ss_pred eeEEEEEc--CC-eEEecchHHHHhhhcccccccccccccc--eeeeccCCccEEEEEEeec---------------ccc
Confidence 99999995 45 8999999999999999766666666554 2233333444444222211 111
Q ss_pred CCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhh
Q 005279 503 SSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLA 582 (704)
Q Consensus 503 ~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~ 582 (704)
..+|+.++.+.. .|.+.... ..++.||++| ......+|..| .+++
T Consensus 381 -----------~~~~~~l~~~~~-----~~~~~~~~-------~~l~ldR~~s---~~f~~~~~~~r--~~~~------- 425 (486)
T COG1621 381 -----------TSFGLELRMGLN-----LVGYDVEN-------ETLTLDRSDS---PLFTVQDGETR--ECFI------- 425 (486)
T ss_pred -----------ceEEEEeecCcc-----eecccccc-------ceEEEecccc---ccccccCCcee--eecc-------
Confidence 137787776653 23332221 1378899988 22234556644 3333
Q ss_pred ccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccCCccEEEEEeCCCCcEEEEEEEEeeccc
Q 005279 583 LSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIYGAARVFLFNNATGASVTSSLKAWQMNS 655 (704)
Q Consensus 583 l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~~~~~v~lf~~~~~~~v~~sl~iw~m~s 655 (704)
..+.+ ++||||||+|+||||+|+|+.|+|+|+||... ..++.|+...+.+.+ ...+|.+++
T Consensus 426 ~~~~~-------v~l~if~D~ssvEiF~NdGe~v~T~rifp~~~---~~~i~l~~~~g~~~~--~~~~~~l~~ 486 (486)
T COG1621 426 ENGAK-------VHLRIFVDNSSVEIFINDGEKVFTSRIFPTPD---ANGISLYSDQGVAVV--QNTIWPLKS 486 (486)
T ss_pred CCCce-------EEEEEEEeCCeEEEEEcCCceEEEEEecCCCc---ccceEEEccCceEEE--EeeeeccCC
Confidence 22344 79999999999999999999999999999985 467888876554433 447888764
No 3
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=100.00 E-value=4.2e-89 Score=761.67 Aligned_cols=413 Identities=31% Similarity=0.561 Sum_probs=327.4
Q ss_pred cccccceeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeE
Q 005279 117 WQRTAFHFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSA 196 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSa 196 (704)
.+||+|||+|+.||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|+++||..|||||||
T Consensus 12 ~~rp~~H~~p~~gw~nDPng~~~~~G~yHlfyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGsa 91 (445)
T TIGR01322 12 EWRPTFHIQPQTGLLNDPNGLIYFKGEYHLFYQWFPFGPVHGLKSWGHYTSKDLVHWEDEGVALAPDDPYDSHGCYSGSA 91 (445)
T ss_pred CcCccCccCCCcCCccCCCcceEECCEEEEEEccCCCCCccCceEEEEEECCCccccEECCccCcCCCcccCCceEECeE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 197 TILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 197 vv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
++ .+|+++|||||+.+ ...|.||+|+|.|+ .+|+|+. +|||.+++.....+||||+| |. .+|+|||+
T Consensus 92 v~-~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg-----~~~~k~~-~pvi~~~~~~~~~~fRDP~V-~~-~~g~~~M~ 162 (445)
T TIGR01322 92 VD-NNGQLTLMYTGNVRDSDWNRESYQCLATMDDD-----GHFEKFG-IVVIELPPAGYTAHFRDPKV-WK-HNGHWYMV 162 (445)
T ss_pred Ee-eCCEEEEEEeccccCCCCCeeEEEEEEEcCCC-----CeEEECC-CceEeCCCCCCcCcCCCCcE-Ee-ECCEEEEE
Confidence 75 78999999999753 24688999999985 6999984 59998755434578999996 53 47899999
Q ss_pred Eeeec-CCeeEEEEEEeCCCCCcEEecceeccC----CCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC
Q 005279 273 IGSRI-NRTGITFVYDTKDFINYELLRGVLHGV----PNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD 346 (704)
Q Consensus 273 ~Gs~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~----~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~ 346 (704)
+|++. +..|++++|+|+||++|++.+.+.... ... .||||||||+|++ ||||.+|..+.
T Consensus 163 ~g~~~~~~~g~i~ly~S~Dl~~W~~~g~~~~~~~~~~~~~g~~~ECPdlf~l~~---------------k~vL~~s~~g~ 227 (445)
T TIGR01322 163 IGAQTETEKGSILLYRSKDLKNWTFVGEILGDGQNGLDDRGYMWECPDLFSLDG---------------QDVLLFSPQGL 227 (445)
T ss_pred EEEecCCCceEEEEEECCCcccCeEecccccccccccCCccceEECCeEEEECC---------------cEEEEEecccc
Confidence 99875 456899999999999999999887542 223 3999999999963 67777765431
Q ss_pred ----------CceEEEEEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccC
Q 005279 347 ----------RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKK 415 (704)
Q Consensus 347 ----------~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~ 415 (704)
....|++|+||..+.+|+|++. ..++|+| +|||+|||.++ ++||||||||++++...++...
T Consensus 228 ~~~~~~~~~~~~~~Y~vG~~d~~~~~f~~~~~------~~~lD~G~dfYA~qtf~~~-~gr~i~~gW~~~~~~~~~~~~~ 300 (445)
T TIGR01322 228 DASGYDYQNIYQNGYIVGQLDYEAPEFTHGTE------FHELDYGFDFYAPQTFLAP-DGRRILVAWMGLPEIDYPTDRD 300 (445)
T ss_pred CcccccccccccceeEEEEEECCCCEEecCCC------CceeccCcCceeeeeEECC-CCCEEEEEeCCCCccCCCCccC
Confidence 1357999999987789997643 2479999 79999999986 7999999999999887777788
Q ss_pred CCCCCCCccEEEEEccCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccCCCccceeeEEEEEechhhhhhcccc
Q 005279 416 GWASLQGIPRTVALDTKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDVGSATQLDIVAEFELDKAALEKTAES 495 (704)
Q Consensus 416 gWag~lslPRel~L~~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~~~~~~ldi~a~f~~~~~~l~~~~~~ 495 (704)
||+|+|||||+|.|+ +| +|+|+|++||++||.+... . ... .....+... ..+++|+++|+..
T Consensus 301 ~W~g~lslpR~l~l~--~g-~L~~~Pv~el~~lr~~~~~--~-~~~-~~~~~~~~~-~~~~~l~~~~~~~---------- 362 (445)
T TIGR01322 301 GWAHCMTLPRELTLK--DG-KLVQTPLRELKALRTEEHI--N-VFG-DQEHTLPGL-NGEFELILDLEKD---------- 362 (445)
T ss_pred CcccccccCEEEEEe--CC-eEEEEEhHHHHHHhcCccc--c-ccc-cccccccCC-CceEEEEEEecCC----------
Confidence 999999999999995 46 8999999999999976532 0 111 111112111 2355665544321
Q ss_pred cceeeecCCCCCcccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecC
Q 005279 496 NVEFSCSSSEGSAERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPN 575 (704)
Q Consensus 496 ~~~~~~~~~~ga~~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv 575 (704)
+ ...|||.+ .+. ++.+.|.|+..++ .+++||++++.... ++..+ .+++
T Consensus 363 ----------~------~~~~~l~~-~~~--~~~~~i~~~~~~~-------~l~~dr~~~~~~~~----~~~~~--~~~~ 410 (445)
T TIGR01322 363 ----------S------AFELGLAL-TNK--GEETLLTIDADEG-------KVTLDRRSSGNLED----YGGTR--SCPL 410 (445)
T ss_pred ----------C------ccEEEEEE-eCC--CCeEEEEEECcCC-------EEEEEccCCCCcCC----ccceE--EEEc
Confidence 0 11478887 442 4679999976542 37889998864321 22222 3343
Q ss_pred cchhhhhccccccccccceEEEEEEEeCCeEEEEEeCCeeEEEEeeecC
Q 005279 576 EHMYMLALSIESSQSIWNIVYVYLQVDHSIVEGFAQGGRTTITSRVYPT 624 (704)
Q Consensus 576 ~~~~~~~l~~e~~~~~~~~l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~ 624 (704)
..+++ ++||||||+|+||||+|||+.|||+||||+
T Consensus 411 -------~~~~~-------~~l~i~vD~s~vEvFvn~G~~~~t~riyp~ 445 (445)
T TIGR01322 411 -------PNTKK-------VSLHIFIDKSSVEIFINDGEEVMTSRIFPD 445 (445)
T ss_pred -------CCCCe-------EEEEEEEECCEEEEEECCCEEEEEEeccCC
Confidence 23355 899999999999999999999999999995
No 4
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=100.00 E-value=9.1e-87 Score=741.30 Aligned_cols=423 Identities=51% Similarity=0.927 Sum_probs=328.8
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCC
Q 005279 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG 202 (704)
Q Consensus 123 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 202 (704)
||+|+.||||||||++|++|+|||||||+|+++.||+++||||+|+|||||+++|+||.|+.+||.+|||||||++ .+|
T Consensus 1 H~~p~~gw~NDPnGl~~~~G~yHlFyq~~p~~~~~g~~~Wgha~S~Dlv~W~~~~~aL~P~~~~d~~g~~sGsav~-~~~ 79 (437)
T smart00640 1 HFQPPKGWMNDPNGLIYYKGKYHLFYQYNPFGPVWGNIHWGHAVSKDLVHWTHLPVALAPDEWYDSNGVFSGSAVI-DPG 79 (437)
T ss_pred CCCCCcCccCCCCeeeEECCEEEEEEecCCCCCCCCCeEEEEEEcCCcceeeecCcccCCCCcCCCCcEEEEEEEE-CCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999976 577
Q ss_pred cEEEEEecccCC-------ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 203 KLMMLYTGSTNE-------SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 203 ~~~~~YTG~~~~-------~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
+++|||||+... ..+.|+.|.+.| +++|+|+++||||.++++....+||||+|+|. ++|+|||++|+
T Consensus 80 ~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d-----~~~w~k~~~~Pvi~~~p~~~~~~fRDP~Vf~~-~~~~~~m~~g~ 153 (437)
T smart00640 80 NLSLLYTGNVAIDTNVQVQRQAQQLAASDDL-----GGTWTKYPGNPVLVPPPGIGTEHFRDPKVFWY-DGDKWYMVIGA 153 (437)
T ss_pred ceEEEEcCCcccccccCcccEEEEEEEECCC-----CCeeEECCCCcEEeCCCCCCCCCcCCCCccEE-CCCEEEEEEEE
Confidence 799999998421 223335555544 38999998899999777666789999998785 34799999998
Q ss_pred ec-CCeeEEEEEEeCCCCCcEEecceeccC-CCC-CceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEE
Q 005279 276 RI-NRTGITFVYDTKDFINYELLRGVLHGV-PNT-GMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYA 352 (704)
Q Consensus 276 ~~-~~~G~~llY~S~Dl~~W~~~~~l~~~~-~~~-gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~ 352 (704)
+. ++.|++++|+|+||++|++.+.++... ... +||||||||+|++++ .+.||||++|..+....+|.
T Consensus 154 ~~~~~~G~i~ly~S~Dl~~W~~~~~~~~~~~~~~g~~wECPdlf~l~~~~----------~~~~~vLi~s~~g~~~~~y~ 223 (437)
T smart00640 154 SDEDKTGIALLYRSTDLKNWTLLGELLHSGVGDTGGMWECPDLFPLPGDG----------DTSKHVLKVSPQGGSGNYYF 223 (437)
T ss_pred EecCCCeEEEEEECCCcccCeECCcccccCCCCccceEECCcEEEeCCCC----------CceeEEEEECcCCCCccEEE
Confidence 75 567999999999999999999987542 333 599999999998654 23699999999876778999
Q ss_pred EEEeeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCc-cccccCCCCCCCCccEEEEEc
Q 005279 353 IGTYHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSE-IADVKKGWASLQGIPRTVALD 430 (704)
Q Consensus 353 iG~~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~-~~~~~~gWag~lslPRel~L~ 430 (704)
+|.|++. .+|+|+... +...+.++|+| +|||+|||.++..+||||||||++++.. ...+..||+|+|||||||+|+
T Consensus 224 ~G~~~g~-~~f~~~~~~-~~~~~~~lD~G~dfYA~qt~~~~~~~r~i~~gW~~~~~~~~~~~p~~~W~g~~tlPRel~l~ 301 (437)
T smart00640 224 VGYFDGS-DQFTPDDPE-DVGIGLRLDYGFDFYASQTFYDPDGNRRILIGWMGEWDSYADDVPTKGWAGALSLPRELTLD 301 (437)
T ss_pred EEEEcCc-eeEeECCcc-ccCccceEecCCCceeeeeeecCCCCcEEEEEecCCCccccccCCCCCccccceeCeEEEEE
Confidence 9999973 479987653 22334589999 8999999999755699999999999742 222338999999999999996
Q ss_pred cCCCceEEeecHHHHHhhhcccccccceEeCCCceeeccC--CCccceeeEEEEEechhhhhhcccccceeeecCCCCCc
Q 005279 431 TKTGSNLLQWPVEEVDSLRLTSKEFKKIELKPGSVMPLDV--GSATQLDIVAEFELDKAALEKTAESNVEFSCSSSEGSA 508 (704)
Q Consensus 431 ~~~G~~L~q~Pv~Ele~LR~~~~~~~~~~~~~gs~~~l~~--~~~~~ldi~a~f~~~~~~l~~~~~~~~~~~~~~~~ga~ 508 (704)
.++| +|+|+|++||++||.. .......+..+....+.. ..+.+++|+++|+.... +
T Consensus 302 ~~~g-~L~~~Pv~el~~lr~~-~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~------------------~-- 359 (437)
T smart00640 302 KTGG-KLLQWPVEELESLRNV-KELSNLTLKPGSVNELLGLTASGDAYEIELSFEVDSG------------------G-- 359 (437)
T ss_pred ecCC-EEEEeecHHHHhhhCc-ccccceeecCCceeeeecccCCccEEEEEEEEEeCCC------------------c--
Confidence 4466 7999999999999954 223334444332222211 23456777777765321 0
Q ss_pred ccccccceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhcccccc
Q 005279 509 ERGALGPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESS 588 (704)
Q Consensus 509 ~rg~~g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~ 588 (704)
.++|||.++++++.++.|.|.|+..++ .+++||++++... ...+...+...+++ ..+++
T Consensus 360 ----~~~~~l~~~~~~~~~~~~~i~~~~~~~-------~l~vdR~~~~~~~--~~~~~~~~~~~~~~-------~~~~~- 418 (437)
T smart00640 360 ----AGPFGLLVLASEDLSEQTAVYFDVSKG-------TLCLDRRSSGTSN--DEVFKGVRGATVPV-------DPGET- 418 (437)
T ss_pred ----ceeEEEEEEeCCCCCceEEEEEEcCCe-------EEEEecCCCCCCc--ccccccceeeeeec-------CCCCe-
Confidence 125899999998888899999976542 3788997765311 11122222112233 23455
Q ss_pred ccccceEEEEEEEeCCeEEEEEeCC
Q 005279 589 QSIWNIVYVYLQVDHSIVEGFAQGG 613 (704)
Q Consensus 589 ~~~~~~l~LrI~VD~SivEvF~n~G 613 (704)
++||||||+|+||||+|||
T Consensus 419 ------~~lri~vD~ssvEvf~ndG 437 (437)
T smart00640 419 ------LSLRILVDHSSVEIFANGG 437 (437)
T ss_pred ------EEEEEEEeceEEEEEeCCC
Confidence 9999999999999999987
No 5
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=100.00 E-value=2.6e-77 Score=637.13 Aligned_cols=299 Identities=44% Similarity=0.904 Sum_probs=250.1
Q ss_pred eeecCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCC
Q 005279 123 HFQPQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDG 202 (704)
Q Consensus 123 Hf~P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG 202 (704)
||+|++||||||||++|++|+|||||||||+++.||+++||||+|+|||||+++|+||.|++++|++|||||||+++ ++
T Consensus 1 H~~p~~gw~NDPnG~~~~~G~yHlFyQ~~P~~~~~g~~~WgHa~S~Dlv~W~~~~~aL~P~~~~d~~g~~SGs~~~~-~~ 79 (308)
T PF00251_consen 1 HFTPPKGWMNDPNGLVYYDGKYHLFYQYNPFGPEWGNMHWGHATSKDLVHWEHLPVALPPDEEYDADGCFSGSAVVD-DD 79 (308)
T ss_dssp SBB-SSEEEEEEEEEEEETTEEEEEEEEETTSSSS-SBEEEEEEESSSSSEEEEEEEE-SSSGGGTTEEEEEEEEEE-TT
T ss_pred CCCCCCCCeECCccCeEeCCEEEEEeccCCCCcccceeEEEEEECCCCCCceeCCceEcccccCCcCccCcceEEEE-CC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875 55
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeC-CCceecC-CCCCCCcCccCCeeEEecCCCeEEEEEeeecCCe
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYP-GNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRT 280 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~-~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~ 280 (704)
+++|||||+.+...|.|++|+|.|.+ .+|+|++ +||||.. |++ ...+||||+|+|.+ +++|+|++|++....
T Consensus 80 ~~~~~YTg~~~~~~~~q~~A~s~d~~----~~w~k~~~~~pvi~~~p~~-~~~~~RDP~v~~~~-~~~~~m~~g~~~~~~ 153 (308)
T PF00251_consen 80 NLVLFYTGNNRDGKQVQCLAYSTDDG----ITWTKYPQGNPVIPEPPPG-DTTDFRDPKVFWRE-DGRWYMLLGAGRDGR 153 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEESSTT----SSEEE-TTTCESBESSSTT-SCTSEEEEEEEEEC-TTEEEEEEEEEETTE
T ss_pred EEEEEEeccCCCCCeEEEEEEECCCC----CceEEcCCCCcEEEecccC-CCCccccCeEEEec-CCEEEEEEeccccCc
Confidence 89999999987668999999997654 9999998 4999995 555 67999999988964 699999999998788
Q ss_pred eEEEEEEeCCCCCcEEecceeccCC-CCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee----CCCCceEEEEEE
Q 005279 281 GITFVYDTKDFINYELLRGVLHGVP-NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM----DDDRHDYYAIGT 355 (704)
Q Consensus 281 G~~llY~S~Dl~~W~~~~~l~~~~~-~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~----~~~~~~~Y~iG~ 355 (704)
|++++|+|+||++|++.+.+..... ..+||||||||+|++++. .+...+|||++|. .....++|++|+
T Consensus 154 g~i~~y~S~Dl~~W~~~~~l~~~~~~~g~~~ECPdlf~l~~~~~-------~~~~~~~vl~~s~~g~~~~~~~~~Y~vG~ 226 (308)
T PF00251_consen 154 GCILLYTSDDLIHWEYLGPLFIPGDNGGGMWECPDLFPLDGKGD-------GTGKWVWVLIFSPQGIEDNGHGTYYMVGD 226 (308)
T ss_dssp EEEEEEEESSSSSEEEEEEESEEETTTSSEEEEEEEEEEEBTTS-------SSEEEEEEEEEEEESTTTTTTEEEEEEEE
T ss_pred ceEEEEEcCCcccCceeCcccccccccccccccceEEEECCccc-------ccceEEEEEEecccccccccccceEEeEE
Confidence 9999999999999999999876543 346999999999998621 0123568999998 345678999999
Q ss_pred eeCCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCcccc-ccCCCCCCCCccEEEEEccCC
Q 005279 356 YHEKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIAD-VKKGWASLQGIPRTVALDTKT 433 (704)
Q Consensus 356 ~d~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~-~~~gWag~lslPRel~L~~~~ 433 (704)
||..+++|+++... ..++|+| +|||+|+|.++.++||||||||++++..... ...||+|+|||||||+|++ +
T Consensus 227 ~d~~~~~f~~~~~~-----~~~lD~G~dfYA~qtf~~~~~~r~i~~gW~~~~~~~~~~~~~~gW~g~lslPR~l~l~~-~ 300 (308)
T PF00251_consen 227 FDFDGGTFTPDDSS-----FQRLDYGFDFYAPQTFYDPDGGRRILIGWMGEWDYNADDYPTYGWAGCLSLPRELTLKD-E 300 (308)
T ss_dssp EETTTTEEEESSTT-----SEESBSSSS-EEEEEEEETTTTEEEEEEEES-TTTHHHHCHGHTEE-EE---EEEEEET-T
T ss_pred ecCCCCeeeeeccc-----cceeccCccccCCchhcCCCcCcEEEEEEecCCCcccccCCCCCCccEEEeCEEEEEEE-C
Confidence 98777899876221 4689999 5999999999755699999999999876333 3699999999999999965 3
Q ss_pred CceEEeec
Q 005279 434 GSNLLQWP 441 (704)
Q Consensus 434 G~~L~q~P 441 (704)
+.+|+|+|
T Consensus 301 ~~~L~q~P 308 (308)
T PF00251_consen 301 GGRLYQKP 308 (308)
T ss_dssp SSSEEEEE
T ss_pred CCeEEEcC
Confidence 45899998
No 6
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=100.00 E-value=3e-67 Score=554.36 Aligned_cols=286 Identities=43% Similarity=0.804 Sum_probs=245.2
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
||||||||++|++|+|||||||+|.++.||+++||||+|+|||||+++|+||.|+..+|..|||||||+++.+|+++|||
T Consensus 1 gw~nDPng~~~~~G~yhlfyq~~p~~~~~~~~~wgha~S~Dlv~W~~~~~al~p~~~~d~~g~~sGsav~~~~g~~~~~Y 80 (298)
T cd08996 1 GWMNDPNGLVYFNGKYHLFYQYNPFGPVWGNMHWGHATSKDLVHWEHLPVALAPDDPYDSGGCFSGSAVVDDNGKLVLFY 80 (298)
T ss_pred CCcccCCeeeEECCEEEEEEcCCCCCCCCCCcEEEEEEecCccceeECCcccCCCCcccCCeEEeCeEEEcCCCcEEEEE
Confidence 89999999999999999999999999999999999999999999999999999988999999999999876559999999
Q ss_pred ecccC---CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 209 TGSTN---ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 209 TG~~~---~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
||+.. ...|.|++|+|.|. +.+|+|+..+|++.+ +.....+||||+|+|. +|+|+|++|++. +..|+++
T Consensus 81 Tg~~~~~~~~~~~~~lA~S~dd----g~~w~k~~~~~~~~~-~~~~~~~~RDP~V~~~--~g~~~m~~g~~~~~~~~~i~ 153 (298)
T cd08996 81 TGNVKLDGGRRQTQCLAYSTDD----GRTFTKYEGNPVIPP-PDGYTTHFRDPKVFWH--DGKWYMVLGAGTEDGTGRIL 153 (298)
T ss_pred eceeCCCCCceEEEEEEEEcCC----CCEEEECCCCceEcC-CCCCCCcccCCeEEeE--CCEEEEEEEEEecCCCcEEE
Confidence 99874 45799999999953 389999988998873 3345679999997663 499999999985 3568999
Q ss_pred EEEeCCCCCcEEeccee-ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC------CceEEEEEEee
Q 005279 285 VYDTKDFINYELLRGVL-HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD------RHDYYAIGTYH 357 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l~-~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~------~~~~Y~iG~~d 357 (704)
+|+|+||++|++.+.+. ......+|||||+||++++ +.||||++|..+. ...+|++|+||
T Consensus 154 ly~S~Dl~~W~~~~~~~~~~~~~~~~~EcP~l~~l~~-------------~~k~vL~~s~~~~~~~~~~~~~~y~~G~~~ 220 (298)
T cd08996 154 LYRSDDLKNWEYLGELLTSLGDFGYMWECPDLFPLDV-------------EGKWVLIFSPQGLEPEGNGSGTGYLVGDFD 220 (298)
T ss_pred EEECCCCCCCEEcceecccCCCccceEeCCcEEEECC-------------CCeEEEEECCCCCCCCCCccceEEEEEEEE
Confidence 99999999999988874 2222335999999999984 1389999987754 35689999999
Q ss_pred CCceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCCce
Q 005279 358 EKNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTGSN 436 (704)
Q Consensus 358 ~~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G~~ 436 (704)
+. .|+++... ..++|+| +|||+|+|.++ ++||||||||++++...+....||+|+|||||+|.|++ ++ +
T Consensus 221 ~~--~~~~~~~~-----~~~lD~G~dfYA~q~~~~~-~~r~i~~gW~~~~~~~~~~~~~~w~g~ls~pr~l~l~~-~~-~ 290 (298)
T cd08996 221 GT--TFTFDHTE-----FGELDYGFDFYAPQTFVDP-DGRRILIGWMGNWDYEYPTPEDGWAGCLTLPRELSLKD-GG-R 290 (298)
T ss_pred CC--CCeEecCC-----ceEecCCCCeEeCceeeCC-CCCEEEEEEecCCCcCCCCCCCCceeeeEeCEEEEEcc-CC-E
Confidence 86 55554211 4689999 89999999996 79999999999999887888999999999999999975 33 8
Q ss_pred EEeecHHH
Q 005279 437 LLQWPVEE 444 (704)
Q Consensus 437 L~q~Pv~E 444 (704)
|+|+|++|
T Consensus 291 l~~~P~~e 298 (298)
T cd08996 291 LYQRPVRE 298 (298)
T ss_pred EEEEeCCC
Confidence 99999986
No 7
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=100.00 E-value=2.4e-54 Score=452.60 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=221.1
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCC--CCcEEEEEEeCCCcceeeccccccc-CCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIW--GDIVWGHAVSKDLIHWYHLPLAMVA-DQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~w--G~~~WGHAvS~DLvhW~~lp~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
.|| .++|++|+||||||++|.+..| |+++||||+|+||+||+++++||.| +..+|..|||+|||++ .+|+++|||
T Consensus 1 ~d~-~~~~~~G~yhlfyq~~p~~~~~~~~~~~wgha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs~~~-~~g~~~l~Y 78 (280)
T cd08995 1 GDP-MPFYDDGTFHIFYLHDPRNGPPEGLRHPWSLLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGSVIK-GEGTYHAFY 78 (280)
T ss_pred CCc-cceEECCEEEEEEEcCCCCCCcccCCceEEEEEccCcCccEECcceecCCCCcccccCceEeEEEe-eCCEEEEEE
Confidence 388 5899999999999999999998 9999999999999999999999988 5577889999999975 679999999
Q ss_pred ecccCC--ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCee
Q 005279 209 TGSTNE--SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTG 281 (704)
Q Consensus 209 TG~~~~--~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G 281 (704)
||+... ..|.|++|+|.|+ .+|+|.+.+||+.+++++...+||||+|+|.+.+|+|+|++|++. +..|
T Consensus 79 Tg~~~~~~~~~~i~~A~S~D~-----~~w~k~~~~pv~~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g 153 (280)
T cd08995 79 TGHNLDGKPKQVVMHATSDDL-----ITWTKDPEFILIADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRG 153 (280)
T ss_pred EEECCCCCCcEEEEEEECCCC-----CccEECCCCeecCCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCe
Confidence 998642 4688999999884 899999888999766666667899999777555799999999875 4568
Q ss_pred EEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC-CCceEEEEEEeeCCc
Q 005279 282 ITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD-DRHDYYAIGTYHEKN 360 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~-~~~~~Y~iG~~d~~~ 360 (704)
++.+|+|+||++|++.+.+... ....|||||++|++++ ||||++|..+ .....|++|+.. .
T Consensus 154 ~i~~~~S~Dl~~W~~~~~~~~~-~~~~~~E~P~l~~~~g---------------~~~L~~s~~~~~~~~~Y~~~~~~--~ 215 (280)
T cd08995 154 CIALFTSKDLKNWEYEEPFYAP-GLYFMPECPDLFKMGD---------------WWYLVYSEFSENRKTHYRVSKSP--F 215 (280)
T ss_pred EEEEEEeCCcCcceecCceecC-CCcceeecceEEEECC---------------EEEEEEEeccCCCcEEEEEeCCC--C
Confidence 9999999999999998876543 2335999999999963 8999998764 345679999622 2
Q ss_pred eeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEEEEccCCC
Q 005279 361 VTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTVALDTKTG 434 (704)
Q Consensus 361 ~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel~L~~~~G 434 (704)
+.|..... ..+| | +|||+|||.++ +||||||||++++.+.++.++||+|+|| ||+|.+.+ +|
T Consensus 216 g~~~~~~~-------~~~d-g~dfYA~~~~~~~--~r~i~~gw~~~~~~~~~~~~~~w~~~l~-~~~~~~~~-~g 278 (280)
T cd08995 216 GPWRAPDD-------DTFD-GRAFYAAKTASDG--TRRFLFGWVPTKAGNDDDGNWEWGGNLV-VHELIQNE-DG 278 (280)
T ss_pred CCeEcCCc-------CccC-cccccceeEEEeC--CeEEEEEEecCCCCcccccCCccceEEE-eeEEEECC-CC
Confidence 35643221 1367 6 89999999995 9999999999999888888999999999 67788763 66
No 8
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=100.00 E-value=6e-38 Score=324.62 Aligned_cols=242 Identities=28% Similarity=0.339 Sum_probs=191.7
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCcceeeccccc--ccCCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWG-DIVWGHAVSKDLIHWYHLPLAM--VADQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLvhW~~lp~AL--~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
||+++. |+||||||++|.+..|+ ..+||||+|+||+||++.+.+| .|...+|..|||+|+++...+|+++|+||
T Consensus 8 ~~~~~~---g~yhlfy~~~~~~~~~~~~~~~~~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~v~~~~dg~~~~~Yt 84 (276)
T cd08979 8 NPAVVV---GKYHLFYLAAPRGGGDGNTSRIGAASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPSVVRDPDGTYRMFYT 84 (276)
T ss_pred CCceEe---eeEEEEEEccCcCcCCCCcceeEEEEcCCCCccEECCcCccCCCCCchhcCCeEcceEEEcCCCeEEEEEe
Confidence 565544 89999999999987765 4567999999999999999888 56778899999999998755599999999
Q ss_pred cccC--CceeeEEEEEeCCCCCCccceeEeeCCCcee-----cCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCee
Q 005279 210 GSTN--ESVQVQNLAYPADPSDPLLIKWVKYPGNPVL-----VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTG 281 (704)
Q Consensus 210 G~~~--~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl-----~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G 281 (704)
|... ...|.|++|+|+|+ .+|+|.+.+|++ ..+......++|||+|++.+.+|+|+|++++.. +..+
T Consensus 85 ~~~~~~~~~~~i~~A~S~D~-----~~w~~~~~~~~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~ 159 (276)
T cd08979 85 GYDRPKGAVQRIGLATSKDL-----IHWTKHGPNPVPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERG 159 (276)
T ss_pred cccCCCCCcceEEEEECCCC-----CceEECCCCcceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCc
Confidence 9873 45688999999984 899998777764 222333456899999766444499999999875 3457
Q ss_pred EEEEEEeCCCCCcEEeccee--ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC-CCceEEEEEEeeC
Q 005279 282 ITFVYDTKDFINYELLRGVL--HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD-DRHDYYAIGTYHE 358 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~-~~~~~Y~iG~~d~ 358 (704)
++.+|+|+|+++|++.+.+. .......+||||++|++++ +|+|.++... .....|.+|.++.
T Consensus 160 ~i~~a~S~D~~~W~~~~~~~~~~~~~~~~~~e~P~~~~~~g---------------~~~l~~~~~~~~~~~~y~vg~~~~ 224 (276)
T cd08979 160 AIGLATSPDLIHWTPVPPPPGPRTGYDDGQLEVPQVVKIDG---------------RWYLLYSGRNEDAKTGYRVGTALF 224 (276)
T ss_pred EEEEEECCCCCcceECCCCCCCCCcccCCcCccceEEEECC---------------EEEEEEEecCccCCccEEEEeccc
Confidence 89999999999999988762 2222345999999999962 7999988764 4567899998876
Q ss_pred CceeeecCCCccccccceeeccC-CCcccceeecCCCCcEEEEEeeCCC
Q 005279 359 KNVTWVPDNPEIDVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGES 406 (704)
Q Consensus 359 ~~~~f~p~~~~~D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~ 406 (704)
. .|+|.. ...+|+| +|||+|++.+..++||+++|||+++
T Consensus 225 ~--~~~~~~-------~~~~~~g~~~ya~~~~~~~~~~~~~~~gw~~~~ 264 (276)
T cd08979 225 G--PGRPLT-------LAELLDRTDLYAARPVPDGEGGGVVLEGFVQFG 264 (276)
T ss_pred C--Cccccc-------cccccCCCCceeEEeccccCCCcEEEEEEeecc
Confidence 4 455542 1357888 7999999998557999999999986
No 9
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=100.00 E-value=2.8e-35 Score=304.49 Aligned_cols=268 Identities=26% Similarity=0.391 Sum_probs=205.3
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
|||| +++++|+||||||++|.+ ++++|+|++|+||+||++++.++. |..+++..++|+|+++...+|+++|+
T Consensus 1 ~DP~-i~~~~g~yyl~~~~~~~~---~~~~~~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~wap~v~~~~~g~~~l~ 76 (286)
T cd08772 1 ADPN-LIKYNGTYYIFFSGDDKN---GNPGIAHATSKDLVNWTDHPVALVWWARRGGPKDSGGIWAPSIVYIENGKFYLY 76 (286)
T ss_pred CCCe-EEEECCEEEEEEEccCCC---CCceEEEEECCCcCcceECCccchhhcccCCCCCCCcEecceEEEcCCCCEEEE
Confidence 7999 999999999999999976 789999999999999999999884 77778889999999987555999999
Q ss_pred EecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecC-CCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 208 YTGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 208 YTG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
||+... ...|.|++|+|+|+. ..|++...+||+.. +......++|||+|++ +++|+|||++++.. +..+.+.
T Consensus 77 yt~~~~~~~~~~i~~a~s~d~~----~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~-d~dG~~y~~~~~~~~~~~~~i~ 151 (286)
T cd08772 77 YTDVSFTKNQQTIGVATAEDGN----GPWTDYIGGPVLPDNPPAADVSNFRDPFVFE-DDDGKWYLVFGSGDHHNFGGIF 151 (286)
T ss_pred EEeecCCCCceeEEEEEcCCCC----CCCccccccccccCCCCccccccccCCeEEE-cCCCCEEEEEccccCCCCCeEE
Confidence 999763 346889999998863 45776655666653 3333456899999655 55699999999764 2356788
Q ss_pred EEEeCCCCCcEEecce--eccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC------CCceEEEEEEe
Q 005279 285 VYDTKDFINYELLRGV--LHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD------DRHDYYAIGTY 356 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l--~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~------~~~~~Y~iG~~ 356 (704)
+++|+|+.+|...+.. .......+++|||++|++++ +|+|..|... .....|++++.
T Consensus 152 ~~~s~d~~~w~~~~~~~~~~~~~~~~~~E~P~~~~~~g---------------~~yL~~s~~~~~~~~~~y~~~~~~~~~ 216 (286)
T cd08772 152 LYESDDDTTWKKGSAELLISEGEGGKQIEGPGLLKKNG---------------KYYLFYSINGTGRVDSTYSIGYARSES 216 (286)
T ss_pred EEEcCCCCCcccccceeeEeeccCCCceeccEEEEECC---------------EEEEEEEcCCCcCCCCCcceEEEEccC
Confidence 9999999999987764 22223346999999999863 7888888765 23456888765
Q ss_pred eCCceeeecCCCcc-ccccceeeccC-CCcccceeecCCCCcEEEEEeeCCCCCccccccCCCCCCCCccEEE
Q 005279 357 HEKNVTWVPDNPEI-DVGIGIRYDYG-LFYASKTFYDQNKKRRVLWGWIGESDSEIADVKKGWASLQGIPRTV 427 (704)
Q Consensus 357 d~~~~~f~p~~~~~-D~g~g~~lD~G-~fYA~qtf~d~~~gRrIl~GW~~~~d~~~~~~~~gWag~lslPRel 427 (704)
+ .+.|++..... -.-.....|.+ .+||++.|.++ ++|++|++|+.+++.... ...+|+++|+|||++
T Consensus 217 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~r~~ 285 (286)
T cd08772 217 D--TGPYVPKSDTSGGLSLTGGNDGGVGPYHAAAFNDA-GGRVVLVYHAYNVQYADA-PTYGWGRSLAIPRLL 285 (286)
T ss_pred C--CCCcccCCCCCCccccccccCCCCCCCccEEEECC-CCCEEEEEEeccCCcccc-ccCCCcccccccccc
Confidence 4 35676543210 00011234556 79999999986 799999999999875433 568999999999986
No 10
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=99.94 E-value=2.7e-25 Score=240.00 Aligned_cols=193 Identities=20% Similarity=0.198 Sum_probs=139.9
Q ss_pred cCCCcce-EECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 132 NDPNGPV-FYKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 132 NDPNG~~-y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
-|..|-+ -++|+.-+|+...|.. +.||++||||++|+||+||++.+ +|.|+.++|.+|||||||++..||+++|
T Consensus 8 ~d~~g~~~~~~G~~~vfaL~a~~~~~~~~rh~~~~wgh~~S~dlv~W~~~~-~l~p~~~~d~~g~wSGsa~~~~dg~~~l 86 (349)
T cd08997 8 QDRDGEVASYNGYEVIFALTADRNLDPDDRHGDARIGYFYSRAGGNWIDGG-KVFPDGLSPGSREWSGSATLDDDGTVQL 86 (349)
T ss_pred ECCCCCEEEECCEEEEEEEecCCCCCCCCCcCceEEEEEEeCCCCcccCCC-ccCCCCcccCCCeEcceEEEeCCCeEEE
Confidence 3566644 4688855999887764 57899999999999999999955 4678999999999999998777799999
Q ss_pred EEecccC----CceeeEEEEEeCCCCCCccceeEeeC--CCceecCC--------------CCCCCcCccCCeeEEecCC
Q 005279 207 LYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYP--GNPVLVPP--------------PGIGAKDFRDPTTAWLTSE 266 (704)
Q Consensus 207 ~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~--~nPVl~~p--------------~g~~~~~fRDP~Vvw~~~~ 266 (704)
||||+.+ .+...|++|.+.+.. +..|.+.. ..+++.+. +.-...+||||+|+..+++
T Consensus 87 fYTg~~~~~~~~~~~~Q~ia~a~~~~---~~v~~~~~~~~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~ 163 (349)
T cd08997 87 FYTAVGRKGEPQPTFTQRLALARGTL---SVVNLSGFEDHHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPET 163 (349)
T ss_pred EEeccccCCCCCCCceEEEEEEECCC---cceEecccCccceeeeCCCceEEeccccccccccCccCcccCCEEEecCCC
Confidence 9999863 234667777665431 22333221 13444321 1112578999996554447
Q ss_pred CeEEEEEeeecC-C---------------------------eeEEEEE--EeCCCCCcEEecceeccCCCCCceeeeeeE
Q 005279 267 GKWRIAIGSRIN-R---------------------------TGITFVY--DTKDFINYELLRGVLHGVPNTGMWECVDFY 316 (704)
Q Consensus 267 g~w~Mv~Gs~~~-~---------------------------~G~~llY--~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf 316 (704)
|+|||+++++.. . .|+|.+. +++|+.+|++.++|+.+......||||++|
T Consensus 164 G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~~~~G~IGia~~~s~dl~~W~~~~PL~~a~~v~d~~E~P~v~ 243 (349)
T cd08997 164 GKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGASYQNGNVGIAVAKNDDLTEWKLLPPLLEANGVNDELERPHVV 243 (349)
T ss_pred CcEEEEEEeccCCCCCccccccccccccccccccccccccccceEEEEEecCCCCCCcEEcCccccCCCcCCceEcceEE
Confidence 999999998752 2 2555554 778999999999998653334479999999
Q ss_pred EcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 317 PVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 317 ~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
++++ ||+|+.|.
T Consensus 244 ~~~g---------------k~yL~~s~ 255 (349)
T cd08997 244 FHNG---------------KYYLFTIS 255 (349)
T ss_pred EECC---------------EEEEEEeC
Confidence 9963 88888773
No 11
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=99.87 E-value=4e-21 Score=202.73 Aligned_cols=190 Identities=20% Similarity=0.280 Sum_probs=140.3
Q ss_pred ceeecCCCCccCCCcceEE-CCEEEEEEeeCCCCCC---C-CCcEEEEEEeCCCc-ceeecccccccC--CCCCCCcEEe
Q 005279 122 FHFQPQKNWMNDPNGPVFY-KGWYHLFYQYNPNGAI---W-GDIVWGHAVSKDLI-HWYHLPLAMVAD--QWYDIMGVWT 193 (704)
Q Consensus 122 ~Hf~P~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~---w-G~~~WGHAvS~DLv-hW~~lp~AL~Pd--~~yD~~Gv~S 193 (704)
.+|..+..++-+|. ++.. +|+||||||..|.+.. | ....||||+|+|+. +|+..+++|.|+ .++|..++++
T Consensus 4 ~~~~~~~~~~w~~~-vi~~~~g~y~lfy~~~~~~~~~~~~~~~~~i~~A~S~~~~g~w~~~g~vl~~~~~~~wd~~~~~~ 82 (291)
T cd08994 4 SGLEDEDYSVWGGS-IIKGPDGKYHLFASRWPEGLGFHGWLPYSEIVHAVSDTPEGPYTFQEVVLPGRGGGYWDARTTHN 82 (291)
T ss_pred ceeeeCCeEEEecc-eEECCCCcEEEEEEEccCCCCCCcccccceEEEEEcCCCCCCcEEeeeEcCCCCCCcccCCCccC
Confidence 56788888999996 5555 5899999999887644 2 23569999999987 899999999887 4688999999
Q ss_pred eeEEEecCCcEEEEEecccC-------CceeeEEEEEeCCCCCCccceeEeeCCCceecC-CC-----------------
Q 005279 194 GSATILPDGKLMMLYTGSTN-------ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PP----------------- 248 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~----------------- 248 (704)
++++. .+|+++|+||+... ...+.+++|++.+. +.+|++. .+|||.+ +.
T Consensus 83 P~vi~-~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~----~g~w~~~-~~pvl~~~~~~~~~~~~~~p~v~~~~~ 156 (291)
T cd08994 83 PTIKR-FDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSL----DGPWKRS-DQPILEPRPGGWDNLITSNPAVTRRPD 156 (291)
T ss_pred CeEEE-ECCEEEEEEEcccCCcccccCCCCceEEEEEeCCC----CCCcEEC-CCceecCCCCccccccccCCCeEEeCC
Confidence 99975 67999999999753 22466777887653 1356654 3444422 00
Q ss_pred -------------------------------------------CCCCcCccCCeeEEecCCCeEEEEEeeecC----Cee
Q 005279 249 -------------------------------------------GIGAKDFRDPTTAWLTSEGKWRIAIGSRIN----RTG 281 (704)
Q Consensus 249 -------------------------------------------g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~----~~G 281 (704)
.....++|||+ ||. .+|+|+|++++..+ ..+
T Consensus 157 g~~~m~y~g~~~~~~~~~~~~gla~s~d~~g~~~~~~~~~v~~~~~~~~~~dP~-V~~-~~g~yym~~~~~~~~~~~~~~ 234 (291)
T cd08994 157 GSYLLVYKGGTYNPTKGNRKYGVAIADSPTGPYTKVSGPPFIEPGDNGNTEDPF-VWY-DKGQFHMIVKDMLGYVTGEKG 234 (291)
T ss_pred CCEEEEEeccccCCCCCcEEEEEEEeCCCCCCCEECCCCccccCCCCCceeCce-EEE-eCCEEEEEEeecccCcCCCCc
Confidence 01124679999 564 46999999998752 467
Q ss_pred EEEEEEeCCCCCcEEecceec----c-CC----CCCceeeeeeE-EcCC
Q 005279 282 ITFVYDTKDFINYELLRGVLH----G-VP----NTGMWECVDFY-PVST 320 (704)
Q Consensus 282 ~~llY~S~Dl~~W~~~~~l~~----~-~~----~~gmWECPdlf-~l~~ 320 (704)
.+.+|+|+|+++|++.+.+.. . .. ..+|||||++| ..++
T Consensus 235 ~i~~a~S~Dg~~W~~~~~~~~~~~~~~~~~~~~~~~~~erP~v~~~~~g 283 (291)
T cd08994 235 GGAYFRSKDGIHWKLAPGLAYSTTVEWTDGTTEDWGRLERPQVLLDEDG 283 (291)
T ss_pred eEEEEECCCCCCceecCcceeeeeEEcCCCcccccccccCCEEEEcCCC
Confidence 899999999999999887742 1 11 23599999999 7753
No 12
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.82 E-value=4.7e-19 Score=188.05 Aligned_cols=185 Identities=22% Similarity=0.272 Sum_probs=135.9
Q ss_pred CCCCCc-ccccccccceeecCCCC----ccCCCcceEECCEEEEEEeeCCCCC--CCCCcEEEEEEeCCCcceeeccccc
Q 005279 108 YPWTNN-MLSWQRTAFHFQPQKNW----MNDPNGPVFYKGWYHLFYQYNPNGA--IWGDIVWGHAVSKDLIHWYHLPLAM 180 (704)
Q Consensus 108 ~~~~~~-~~~w~Rp~~Hf~P~~gW----mNDPNG~~y~~G~YHLFYQ~nP~~~--~wG~~~WGHAvS~DLvhW~~lp~AL 180 (704)
+..+.. +..|.|...-+.+...| +.+|. +++++|+||||||++|..+ .++.++||||+|+||++|++.+.+.
T Consensus 51 ~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~-v~~~~G~y~myys~~~~~~~~~~~~~~i~~a~S~Dl~~w~~~~~~~ 129 (294)
T cd08984 51 VASSKDGGATWTYRGTADGLEFECGRNTFWAPE-VVWHGGVYHMYVTYIPGVPPDWGGPRRIVHYTSPNLWDWTFVGRVD 129 (294)
T ss_pred EEEeCCCCCCCEEeeeeccCCCCCcccceeCce-EEEECCEEEEEEEecCCCCcccCCCcEEEEEECCCcCcceECCccc
Confidence 444556 77887765433332233 34675 6889999999999998753 3467999999999999999988763
Q ss_pred ccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCee
Q 005279 181 VADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTT 260 (704)
Q Consensus 181 ~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~V 260 (704)
. +..++++++++.+.||+++|+||+... .+.+++|.|.|+ .+|++. .+++.. ...++|+|
T Consensus 130 ~-----~~~~~iD~~vf~~~dg~~yl~y~~~~~--~~~~~~a~s~D~-----~~w~~~--~~~i~~------~~~EgP~v 189 (294)
T cd08984 130 L-----DSDRVIDACVFKLPDGRWRMWYKDERR--GSTTYAADSEDL-----YHWTVE--GPVLGD------RPHEGPNV 189 (294)
T ss_pred c-----CCCCcEEeEEEEeCCCEEEEEEECCCC--CeEEEEEECCCC-----CEEEeC--CccccC------CCCCCCCe
Confidence 2 245899999987777999999998643 345789999884 899985 455542 12379995
Q ss_pred EEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCC---C-CCceeeeeeEEcC
Q 005279 261 AWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVP---N-TGMWECVDFYPVS 319 (704)
Q Consensus 261 vw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~---~-~gmWECPdlf~l~ 319 (704)
| +.+|+|||+++. ..| +.+|+|+|+.+|++.+.++...+ . ..+++||++++.+
T Consensus 190 -~-k~~g~yym~~~~---~~g-~~~~~S~D~~~W~~~~~~l~~~~~~~~~~~~~~H~~i~~~~ 246 (294)
T cd08984 190 -F-RWKGYYWMIIDE---WKG-LGVYRSKDAENWERQGGILLKPGTRPDDGAKGRHADVVVTG 246 (294)
T ss_pred -e-EECCEEEEEEcC---Cce-EEEEECCChhhcEECCeeeccCCCCccccccccCCcEEEeC
Confidence 4 357899999853 234 66999999999999987775321 1 2378999999775
No 13
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.80 E-value=1.6e-18 Score=181.36 Aligned_cols=160 Identities=23% Similarity=0.276 Sum_probs=122.8
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccc-cccc--CCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL-AMVA--DQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~-AL~P--d~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
|| |+++++|+||||||.++.. +.++||||+|+|++||+..+. .|.| +..++..||++++++ ..+|+++|+||
T Consensus 2 nP-~v~~~~G~y~l~y~~~~~~---~~~~ig~A~S~Dg~~~~~~~~~~i~p~~~~~~~~~gv~dP~v~-~~~g~y~m~Yt 76 (268)
T cd08993 2 NP-AVVYDNGEFYLLYRAAGND---GVIRLGLARSRDGLHFEIDPDPPVWPPPEDGFEEGGVEDPRIV-KIDDTYYITYA 76 (268)
T ss_pred cC-eEEEECCEEEEEEEEECCC---CceEEEEEEECCCceEEECCcceEcCCCCCcccccCccCcEEE-EECCEEEEEEE
Confidence 67 7899999999999987644 578999999999999998764 4556 667788999999986 46999999999
Q ss_pred cccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe-cCCCeEEEEEeeec---CCeeEEE
Q 005279 210 GSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL-TSEGKWRIAIGSRI---NRTGITF 284 (704)
Q Consensus 210 G~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~-~~~g~w~Mv~Gs~~---~~~G~~l 284 (704)
+... ...+.+++|.|+|. .+|+|.. . ++. | ..||+. +|. +.+|+|+|++.... +..+.+.
T Consensus 77 a~~~~~~~~~i~lA~S~D~-----~~W~~~~-~-~~~-~------~~~d~~-~~p~~~~g~y~m~~r~~~~~~~~~~~I~ 141 (268)
T cd08993 77 ARPNAPNGTRIGLATTKDF-----ITFERLG-T-SLV-P------NNRDGI-LFPEKINGKYVMLHRPFEYGGTSPPDMW 141 (268)
T ss_pred ccCCCCCCcEEEEEEeCCc-----ceEEEec-c-cCC-C------CCCCEE-EeeEEECCEEEEEEccccCCCCCCCcEE
Confidence 9863 34578999999984 8999973 2 111 1 237888 554 35899999996442 2457888
Q ss_pred EEEeCCCCCcEEecceeccCCCCCceeeee
Q 005279 285 VYDTKDFINYELLRGVLHGVPNTGMWECVD 314 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l~~~~~~~gmWECPd 314 (704)
+++|+|+.+|+..+.++.. ..+.||+-.
T Consensus 142 lA~S~Dl~~W~~~~~~~~~--~~~~wd~~~ 169 (268)
T cd08993 142 LSFSPDLVHWGNHRFVLSP--RPNHWEQLK 169 (268)
T ss_pred EEECCCcCccCCCeEEecC--CCCceeece
Confidence 9999999999987776543 223587643
No 14
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.79 E-value=4.2e-18 Score=178.48 Aligned_cols=192 Identities=15% Similarity=0.195 Sum_probs=139.3
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccC-CCCCCCcEEeeeEEEecCCcEEE
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVAD-QWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd-~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
.||++||+. ++++|+||||++....+ +....|.+++|+||+||++++.+|.+. ..++..++|.++++. .+|+++|
T Consensus 5 ~g~~~DP~i-~~~~g~yY~~~t~~~~~--~~~~~~~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~wAP~v~~-~~g~yy~ 80 (275)
T cd09004 5 PGWYADPEI-RIFGGTYYIYPTSDGAG--GEQTPFDVFSSKDLVNWTKEGIILDMADVSWANRAAWAPSVIE-RNGKYYF 80 (275)
T ss_pred CCCCCCCCe-EEECCEEEEEEeccCCC--CCeeEEEEEECCCCCCceECcccccccCCcccCCCcCCCeEEE-ECCEEEE
Confidence 478999985 78899999999876543 225789999999999999999998764 345678999999865 6899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVY 286 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY 286 (704)
+||+. +.+++|+|+|+. ..|++..++|++.+.. ....++||.++. +.+|+|||++++. .++.++-
T Consensus 81 yys~~-----~~i~va~s~~p~----gp~~~~~~~p~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~i~~ 145 (275)
T cd09004 81 YFSAN-----GGIGVAVADSPL----GPFKDALGKPLIDKFT--FGAQPIDPDVFI-DDDGQAYLYWGGW---GHCNVAK 145 (275)
T ss_pred EEEcC-----CcEEEEEeCCCC----CCCCCCCCCccccCCc--CCCCccCCCeEE-CCCCCEEEEEcCc---CCEEEEE
Confidence 99986 457899998753 5688755678876432 235689999654 5789999999864 1222334
Q ss_pred EeCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 287 DTKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 287 ~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
-++|+.+|+.....+. .....+.|||.+|+.++ +++|+.|........|.+|
T Consensus 146 l~~d~~~~~~~~~~~~-~~~~~~~EgP~i~k~~G---------------~yyl~ys~~~~~~~~Y~~~ 197 (275)
T cd09004 146 LNEDMISFDGERDGSE-ITPKNYFEGPFMFKRNG---------------IYYLMWSEGGWTDPDYHVA 197 (275)
T ss_pred ECCCcccccCcceeee-ccCCCceecceEEEECC---------------EEEEEEECCCCCCCCceEE
Confidence 5788988875443321 12234899999998852 6788888654332334444
No 15
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.70 E-value=1.3e-15 Score=159.89 Aligned_cols=195 Identities=18% Similarity=0.168 Sum_probs=133.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-CCCCcEEeeeEEEecCCcEEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-YDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
+.+-||. +++++|+|+||+..... .+|+|++|+||+||+..+.+|.+... .+..++|.++++ ..+|+++|+
T Consensus 6 ~~~~DP~-i~~~~g~yy~~~t~~~~------~~i~~~~S~Dl~~W~~~g~~l~~~~~~~~~~~~waP~v~-~~~g~y~~~ 77 (287)
T cd08999 6 GDFPDPS-VIRVDGTYYAYATNGNG------PNVPIATSTDLVNWTYLGDAFPKLPRWWTGGDFWAPDVS-YVNGKYVLY 77 (287)
T ss_pred CCCCCCe-EEEECCEEEEEEeCCCC------CcEEEEECCCCCCcEECCcccCCCCCcccCCCccCceEE-EECCEEEEE
Confidence 4567996 67889999999975432 67999999999999999988876654 455678988875 467999999
Q ss_pred EecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCee---EE
Q 005279 208 YTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTG---IT 283 (704)
Q Consensus 208 YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G---~~ 283 (704)
||+.... ..+.+++|+|.|.. ..|++.. .+++..+.+ ....+||.+++ +++|+|||++++.....| .+
T Consensus 78 y~~~~~~~~~~~i~~a~s~~p~----g~~~~~~-~~~~~~~~~--~~~~~Dp~v~~-d~dG~~Yl~~~~~~~~~~~~~~i 149 (287)
T cd08999 78 YSARDKGSGGQCIGVATADSPL----GPFTDHG-KPPLCCPEG--EGGAIDPSFFT-DTDGKRYLVWKSDGNSIGKPTPI 149 (287)
T ss_pred EEeecCCCCCEEEEEEECCCCC----CCCccCC-cceEecCCC--CCCccCCCeEE-CCCCCEEEEEeccCCCCCCCceE
Confidence 9998652 34667889987752 5798864 333332222 24679999655 568999999987532211 12
Q ss_pred EEE-EeCCCCCcEEecc-eeccCC--CCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCce--EEEEE
Q 005279 284 FVY-DTKDFINYELLRG-VLHGVP--NTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHD--YYAIG 354 (704)
Q Consensus 284 llY-~S~Dl~~W~~~~~-l~~~~~--~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~--~Y~iG 354 (704)
.+. .|+|+.+|..... ++.... ...++|||.+|+.++ +++|.+|....... .|.+|
T Consensus 150 ~~~~ls~d~~~~~~~~~~i~~~~~~~~~~~~EgP~i~k~~g---------------~yyl~~S~~~~~~~~~~y~i~ 211 (287)
T cd08999 150 YLQELSADGLTLTGEPVRLLRNDEDWEGPLVEAPYLVKRGG---------------YYYLFYSAGGCCSGASTYAVG 211 (287)
T ss_pred EEEEeCCCCccccCCcEeeecccccccCCceEeeEEEEECC---------------EEEEEEEcCCccCCCCCEEEE
Confidence 222 4689888864332 222111 234899999999852 78888887543222 45554
No 16
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=99.63 E-value=1.4e-14 Score=151.89 Aligned_cols=195 Identities=14% Similarity=0.163 Sum_probs=138.8
Q ss_pred CCCcceEECCEEEEEEeeCCCCCC---CCCcEEEEEEeCCCcceeecccccccCC--CCCCCcEEeeeEEEecCCcEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAI---WGDIVWGHAVSKDLIHWYHLPLAMVADQ--WYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~---wG~~~WGHAvS~DLvhW~~lp~AL~Pd~--~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
||. +++++|+||||.......+. +....|..+.|+||+||+..+.+|.+.. .++..++|.++++ ..+|+++||
T Consensus 2 DP~-~~~~~~~yy~~~t~~~~~~~~~~~~~~~~~v~~S~Dl~~W~~~g~~l~~~~~~~~~~~~~wAP~i~-~~~g~yy~y 79 (274)
T cd08990 2 DPA-AHVFNGRVYIYTSHDEAGGGGDDFCMNDYHVFSSPDLVNWTDHGVILSVTDFPAWAKGQAWAPDVV-EKNGKYYLY 79 (274)
T ss_pred CCC-cEEECCEEEEEeCCCCCCCCCCccccceEEEEECCCCCCcEECcccccCCCCCccccCCcCcCeEE-EECCEEEEE
Confidence 885 67789999999987654432 3345689999999999999999887543 3667899999986 479999999
Q ss_pred EecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE
Q 005279 208 YTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYD 287 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~ 287 (704)
||+......+.+++|+|+|.. ..|++....|++...+ ......||.+++ .++|++||+.++. .++.+.-.
T Consensus 80 y~~~~~~~~~~igva~s~~p~----Gpw~~~~~~~~~~~~~--~~~~~iDp~vf~-d~dG~~yl~~~~~---~~~~~~~l 149 (274)
T cd08990 80 FPARDKDGGFAIGVAVSDSPA----GPFKDAGGPILITTPS--GGWYSIDPAVFI-DDDGQAYLYWGGG---LGLRVAKL 149 (274)
T ss_pred EEeecCCCceEEEEEEeCCCC----CCCCCCCCccccccCC--CCCCccCCcEEE-CCCCCEEEEECCc---CCEEEEEe
Confidence 999754345678899997752 5798865555554221 234678999654 6689999999864 24444556
Q ss_pred eCCCCCcEEecceecc-----CCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 288 TKDFINYELLRGVLHG-----VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 288 S~Dl~~W~~~~~l~~~-----~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
|+|+.+|+.....+.. ....+..|+|.+|+..+ +++|..|.+......|++.
T Consensus 150 ~~d~~~~~~~~~~i~~~~~~~~~~~~~~EgP~i~k~~G---------------~YYl~yS~~~~~~~~~a~s 206 (274)
T cd08990 150 KPDMLSLKGEPVEIVITDGAGDELRRFFEAPWVHKRNG---------------TYYLSYSTGDPEEIAYATS 206 (274)
T ss_pred CccccccCCCcEEEEeccccCCCCCCcccceeEEEECC---------------EEEEEEECCCCcEEEEEEc
Confidence 8899999754443321 11234789999998852 7888888765444445543
No 17
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=99.58 E-value=1.3e-13 Score=142.32 Aligned_cols=191 Identities=21% Similarity=0.204 Sum_probs=128.6
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCCCCcEEeeeEEEecCCcEEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYDIMGVWTGSATILPDGKLMMLY 208 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD~~Gv~SGSavv~~dG~~~~~Y 208 (704)
||. +++++|+|||||..... ....++.++|+||++|+..+.++. +....+..++|.++++. .+|+++|+|
T Consensus 2 DP~-v~~~~~~yyl~~t~~~~----~~~~i~i~~S~Dl~~W~~~~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~y 75 (271)
T cd08978 2 DPY-ILRYNGKYYLYGSTDDA----AGPGVQVWSSKDLVNWRYEGAVFVAWRGRGEAKDSGGLWAPEVIY-YEGKYYLYY 75 (271)
T ss_pred CCc-EEEECCEEEEEEecCCc----CCCcEEEEECCccCCcEECCcccccccccCCcccCCceeCCeEEE-ECCEEEEEE
Confidence 885 68889999999987643 235689999999999999998875 44456678899999865 679999999
Q ss_pred ecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEEE
Q 005279 209 TGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN--RTGITFV 285 (704)
Q Consensus 209 TG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--~~G~~ll 285 (704)
|+... ...+.+++|+|+|. ..|.+... ...+. ......+||.+++ +++|++||+.++... ..+.+.+
T Consensus 76 ~~~~~~~~~~~i~~a~s~d~-----~g~~~~~~---~~~~~-~~~~~~iDp~vf~-d~dg~~yl~~~~~~~~~~~~~i~~ 145 (271)
T cd08978 76 SVSDFDYNGSGIGVATSEDP-----TGPFEDKV---IRPPT-SNNGNSIDPTVFK-DDDGKYYLYYGSGDPGAGFGGIYI 145 (271)
T ss_pred EcccCCCCcccEEEEECCCC-----CCCccccc---cCcCc-cCCCCccCcceEE-cCCCCEEEEEecccCCCCCCcEEE
Confidence 99753 23467889999875 45555321 11111 1234678999655 566999999987642 2455677
Q ss_pred EEeCCCCCcEEecce-e-ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 286 YDTKDFINYELLRGV-L-HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 286 Y~S~Dl~~W~~~~~l-~-~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
.++++...|...... . .......+.|||.+|+..+ +++|..|........|.++
T Consensus 146 ~~l~~~~~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g---------------~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 146 SELTDDLTKPTGPPVLSASSGNNNAVTEGPTIFKKNG---------------YYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EEECcccccccCCceeeeeeccCCCceEccEEEEECC---------------EEEEEEEeCCCCCCCceEE
Confidence 777664443322221 1 1112234899999998752 7888887654422335444
No 18
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.53 E-value=5.9e-13 Score=140.77 Aligned_cols=188 Identities=15% Similarity=0.124 Sum_probs=127.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-CCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-WYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
||. +++++|+|+||+..... ...+..++|+||+||+..+.++.+.. .+...++|.++++. .+|+++|+||+.
T Consensus 2 DP~-v~~~~g~yyl~~t~~~~-----~~~i~~~~S~Dl~~W~~~~~~~~~~~~~~~~~~~waP~v~~-~~g~yyl~ys~~ 74 (294)
T cd08991 2 DPF-VLRYNGKYYAYGTGGAD-----GRGFAVYSSPDLVDWKLHGGALLALDDDWGRRGFWAPEVYY-YNGKFYMYYSAN 74 (294)
T ss_pred CCe-EEEECCEEEEEEeCCCC-----CCeeEEEECCCCCCceECCccccCCCCCccCCcEEccEEEE-ECCEEEEEEEec
Confidence 886 68889999999876543 23578999999999999998887655 36678999999864 689999999997
Q ss_pred cCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC---eeEEEEEE
Q 005279 212 TNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR---TGITFVYD 287 (704)
Q Consensus 212 ~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~---~G~~llY~ 287 (704)
... ..+.+++|+|+|+. ..|++....++ .. + ...+||.+++ ..+|+|||+.+..... .++.+.--
T Consensus 75 ~~~~~~~~i~~a~s~~p~----gp~~~~~~~~~-~~--~---~~~iD~~vf~-d~dG~~yl~~~~~~~~~~~~~i~~~~l 143 (294)
T cd08991 75 DRDEKTEHIGVAVSDSPL----GPFRDIKKPPI-DF--E---PKSIDAHPFI-DDDGKPYLYYSRNNYGNRVSDIYGTEL 143 (294)
T ss_pred cCCCCcceEEEEEeCCCC----CCCCcCCCCcc-cC--C---CcccCCceEE-CCCCCEEEEEEecCCCCcccceEEEEE
Confidence 543 45778999998752 56877532222 21 1 3467999655 5679999999865321 24555556
Q ss_pred eCCCCCcEEecc--eec-c---------------CCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCce
Q 005279 288 TKDFINYELLRG--VLH-G---------------VPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHD 349 (704)
Q Consensus 288 S~Dl~~W~~~~~--l~~-~---------------~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~ 349 (704)
+.|+.+|.-... ... . .....+-|+|.+++.++ +++|..|.......
T Consensus 144 ~~d~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~EgP~~~k~~g---------------~yyl~ys~~~~~~~ 208 (294)
T cd08991 144 VDDKLSIKTELVGPPIPVSAPGIDEIFERWRFGEGKDWRTNEGPTVLKHNG---------------RYYLTYSANHYENE 208 (294)
T ss_pred ccceeeeccceeeccccccccccccccccccccccccCceeeCcEEEEECC---------------EEEEEEECCCCCCC
Confidence 788877652111 000 0 01123789999998852 68888876443333
Q ss_pred EEEE
Q 005279 350 YYAI 353 (704)
Q Consensus 350 ~Y~i 353 (704)
.|.+
T Consensus 209 ~y~~ 212 (294)
T cd08991 209 DYGV 212 (294)
T ss_pred CceE
Confidence 3433
No 19
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=99.47 E-value=3.7e-12 Score=134.64 Aligned_cols=129 Identities=23% Similarity=0.259 Sum_probs=98.6
Q ss_pred ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-------CCCCCcEEeeeEEEecCCc
Q 005279 131 MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-------WYDIMGVWTGSATILPDGK 203 (704)
Q Consensus 131 mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-------~yD~~Gv~SGSavv~~dG~ 203 (704)
+.||. +++++|+||||+... ++++++|+||+||++.+.++.+.. +.+..++|.++++. .+|+
T Consensus 1 ~~DP~-v~~~~~~yyl~~t~~---------~i~i~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~wAP~v~~-~~g~ 69 (288)
T cd08998 1 VHDPS-IIKEGDTYYLFSTGN---------GIAIAKSKDLGNWTYVGSVFPTGPPWWSSIDPGGSGNLWAPDVIY-LNGK 69 (288)
T ss_pred CCCCe-EEEECCEEEEEEcCC---------CeEEEECCCCCCcEECCccccCCCccccccccCCCCCccCCeEEE-ECCE
Confidence 46996 789999999999864 589999999999999998886543 23457899999864 6999
Q ss_pred EEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 204 LMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 204 ~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
++|+||+.... ..+.+++|+|+|. ....|++. +||+...++......+||.+++ .++|++||+.++.
T Consensus 70 yyl~ys~~~~~~~~~~i~va~s~~~---~~gpw~~~--~~v~~~~~~~~~~~~iDp~vf~-d~dG~~Yl~~~~~ 137 (288)
T cd08998 70 YYLYYSVSTFGSNRSAIGLATSDTL---PDGPWTDH--GIVIESGPGRDDPNAIDPNVFY-DEDGKLWLSFGSF 137 (288)
T ss_pred EEEEEEEEeCCCCceEEEEEEeCCC---CCCCCEEc--ceeeecCCCCCCcccccCCEEE-cCCCCEEEEeeec
Confidence 99999987543 3466789999874 12579874 5888754332334678999655 5689999999864
No 20
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.47 E-value=1.4e-12 Score=141.63 Aligned_cols=170 Identities=22% Similarity=0.261 Sum_probs=120.9
Q ss_pred cccceeecCCCCc-cCCCcceEECCEEEEEEeeCCC-----------CC--CCCCcEEEEEEeCCCcceeecccccccC-
Q 005279 119 RTAFHFQPQKNWM-NDPNGPVFYKGWYHLFYQYNPN-----------GA--IWGDIVWGHAVSKDLIHWYHLPLAMVAD- 183 (704)
Q Consensus 119 Rp~~Hf~P~~gWm-NDPNG~~y~~G~YHLFYQ~nP~-----------~~--~wG~~~WGHAvS~DLvhW~~lp~AL~Pd- 183 (704)
.|..=+.+..+.. .||+.+++.+|.|||||++... .+ .|.....+||+|+||+||++.+.+|.+.
T Consensus 24 ~p~~~~~~e~~i~r~dP~~Vi~~~g~Y~mwYs~~~~~~~~~~~~~~~~~~~~w~~y~I~~A~S~Dgv~W~~~g~~L~~~~ 103 (349)
T cd08992 24 YPKGGLGYEEGVHRRDPSSVIKVDGLYHVWYTKSEGETDGFGTGDPEAKVFPWDKCEIWHATSKDGWTWKEEGPAIGRGE 103 (349)
T ss_pred CcccccccccCeecCCCceEEEECCEEEEEEEecCCcccccccCCccccccCCCceEEEEEECCCCCCceECCccccCCC
Confidence 4444455555544 5998889999999999997532 11 1446778999999999999999888654
Q ss_pred -CCCCCCcEEeeeEEEecCCcEEEEEecccCC----ceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CC--------
Q 005279 184 -QWYDIMGVWTGSATILPDGKLMMLYTGSTNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PG-------- 249 (704)
Q Consensus 184 -~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g-------- 249 (704)
..||..++|..+++ ..+|+++|+|++.... ..+.+++|++.++. ..|++. .+||+.+- ++
T Consensus 104 ~g~Wd~~~vwaP~Vi-~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~----GpWtr~-d~Pil~p~~dg~w~~d~~~ 177 (349)
T cd08992 104 KGAYDDRSVFTPEVL-EHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPY----GPWTKS-DEPILSPSNDGIWKGDEDN 177 (349)
T ss_pred CCCccccceECcEEE-EECCEEEEEEEecccccCCCCcceEEEEEECCcc----cccccC-CCcEecCCcCCceeeccCc
Confidence 35889999999986 6799999999975421 23568999998752 359986 68998752 11
Q ss_pred ---------CCCcCccCCeeEEecCCCeEEEEEeeecC--------CeeEEEEEEeCCCC-CcEE
Q 005279 250 ---------IGAKDFRDPTTAWLTSEGKWRIAIGSRIN--------RTGITFVYDTKDFI-NYEL 296 (704)
Q Consensus 250 ---------~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--------~~G~~llY~S~Dl~-~W~~ 296 (704)
++...+.||.|+. .+|+|||++.+... ..-++.|..|+++. -|+.
T Consensus 178 ~~~~~~~g~wD~~~v~~P~v~~--~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~GPf~r 240 (349)
T cd08992 178 RFLVKKKGSFDSHKVHDPCLFP--FNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPEGPYVK 240 (349)
T ss_pred eeEeccCCCcccCceECCEEEE--ECCEEEEEEEccccCcccccCCCCceEEEEEECCCCCCCEe
Confidence 3345578999653 58999999966431 11256677888764 4654
No 21
>cd08984 GH43_5 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.39 E-value=1.4e-11 Score=130.93 Aligned_cols=169 Identities=18% Similarity=0.215 Sum_probs=117.5
Q ss_pred ccCCCcceEE--CCEEEEEEee-C---CCC-CCCC-CcEEEEEEeCC-CcceeecccccccCCCCCCCcEEeeeEEEecC
Q 005279 131 MNDPNGPVFY--KGWYHLFYQY-N---PNG-AIWG-DIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVWTGSATILPD 201 (704)
Q Consensus 131 mNDPNG~~y~--~G~YHLFYQ~-n---P~~-~~wG-~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~d 201 (704)
.-||. +++. +|+|||||-. . |.. ..|. ...+|+|+|+| |+||+.++.++.++..+....+|.+.++. .+
T Consensus 11 ~~DP~-i~~~~~~~~~~~~yT~~~~~~~~~~~~w~~~~~i~~a~S~D~l~~W~~~g~~~~~~~~~~~~~~WAP~v~~-~~ 88 (294)
T cd08984 11 AADPT-IIYNRETKEWWMFYTNRRANVPTPGVAWVHGTDIGVASSKDGGATWTYRGTADGLEFECGRNTFWAPEVVW-HG 88 (294)
T ss_pred CCCCE-EEEeCCCCEEEEEEccccCcCCCCCcccCcCceEEEEEeCCCCCCCEEeeeeccCCCCCcccceeCceEEE-EC
Confidence 67996 7887 7899999942 1 111 2343 35799999999 99999998777664455667799999864 68
Q ss_pred CcEEEEEecccC-----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 202 GKLMMLYTGSTN-----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 202 G~~~~~YTG~~~-----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|+++||||.... ......++|+|+| +.+|++.+ ++..+ .....||.++. ..+|+|+|++...
T Consensus 89 G~y~myys~~~~~~~~~~~~~~i~~a~S~D-----l~~w~~~~--~~~~~-----~~~~iD~~vf~-~~dg~~yl~y~~~ 155 (294)
T cd08984 89 GVYHMYVTYIPGVPPDWGGPRRIVHYTSPN-----LWDWTFVG--RVDLD-----SDRVIDACVFK-LPDGRWRMWYKDE 155 (294)
T ss_pred CEEEEEEEecCCCCcccCCCcEEEEEECCC-----cCcceECC--ccccC-----CCCcEEeEEEE-eCCCEEEEEEECC
Confidence 999999997532 1235678899987 37899753 33211 12457999653 4679999999643
Q ss_pred cCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 277 INRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 277 ~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
.. ...+.+..|+|+.+|+..+.++. . ..-|+|.+|+..
T Consensus 156 ~~-~~~~~~a~s~D~~~w~~~~~~i~---~-~~~EgP~v~k~~ 193 (294)
T cd08984 156 RR-GSTTYAADSEDLYHWTVEGPVLG---D-RPHEGPNVFRWK 193 (294)
T ss_pred CC-CeEEEEEECCCCCEEEeCCcccc---C-CCCCCCCeeEEC
Confidence 22 22445678999999998665442 1 134888888764
No 22
>PF11837 DUF3357: Domain of unknown function (DUF3357); InterPro: IPR021792 This entry represents the N-terminal domain of beta-fructofuranosidase, whcih is involved in the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides. ; GO: 0004564 beta-fructofuranosidase activity, 0004575 sucrose alpha-glucosidase activity; PDB: 3UGG_A 3UGH_B 3UGF_B.
Probab=99.36 E-value=6e-14 Score=128.08 Aligned_cols=94 Identities=39% Similarity=0.595 Sum_probs=3.6
Q ss_pred CCCCCCCCCCCC-------CCCccchhhHHHHHHHHHHHHHHHH-hhCCCCCCcccccCCCCCccccccCCCCcCCCCCC
Q 005279 6 VSYNPLPDGERP-------RPTRRRSIVLVLSGLLVVGFLVALL-SDNGSIAPANVIDNDNNNVNDNAKNGLNDVSSSSK 77 (704)
Q Consensus 6 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (704)
.+|+|||+++++ +||+.|.+++|++++++|++||+++ ...+. .+. . ..........
T Consensus 5 ~sY~PLP~~~~~~~~~~~~~rR~~k~~~~i~~s~~~ll~lval~~~~~~~-~~~-------~--------~~~~~~~~~~ 68 (106)
T PF11837_consen 5 YSYTPLPDSSESAPGPGGRRRRPLKCLAAIFSSLLFLLSLVALIVINNGQ-SPD-------G--------SSVSSSSPPP 68 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccCCCCCCCcccCCCCcCcCCcchhHHHHHHHHHHHHHHHHHHHhhccC-CCC-------c--------cccccCCCCC
Confidence 469999977532 2445589999999999999999998 22221 000 0 0001112233
Q ss_pred CCcccccCCCCCccccccccccccCCCCCCCCCCCccc
Q 005279 78 EPERLRPFTSASSAGVSEKSNRRFGSRTASYPWTNNML 115 (704)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (704)
.+++..|.+||+++|||||+++...+...+|||+|+||
T Consensus 69 ~~~~~~~~SRGv~~GVSEKS~~~~~~~~~~FpWtNaML 106 (106)
T PF11837_consen 69 SPETATPVSRGVSEGVSEKSNGAGSGAGNSFPWTNAML 106 (106)
T ss_dssp ----------------------------------HHHH
T ss_pred CCccccCCCCCcccCcccccccCccCCCCCCCCccccC
Confidence 44555678999999999999988666677999999997
No 23
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.30 E-value=2.7e-10 Score=119.71 Aligned_cols=197 Identities=18% Similarity=0.111 Sum_probs=130.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC----CCCCCcEEeeeEEEec-CCcEEEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ----WYDIMGVWTGSATILP-DGKLMML 207 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~----~yD~~Gv~SGSavv~~-dG~~~~~ 207 (704)
|| ++++++|+|++|--....+.. ....|-..+|+||+||+..+.+|.+.. .....++|.++++..+ +|+++|+
T Consensus 5 ~~-~i~~~~~~yY~ygs~~~~~~~-~~~gi~~~sS~DLvnW~~~g~vl~~~~~~~~~~~~~~~waP~v~y~~~~g~Y~m~ 82 (265)
T cd08985 5 GG-GILKVGGTYYWYGENKGGGDT-AFGGVSCYSSTDLVNWTFEGLALTPEEDSADLGPGRIIERPKVIYNAKTGKYVMW 82 (265)
T ss_pred cC-ceEEECCEEEEEEEecCCCCc-ccccEEEEECCCCccceECceeccccccccccccCcEEECCeEEEeCCCCEEEEE
Confidence 45 578899999999776543211 135578889999999999999997754 3445679999997643 6999999
Q ss_pred EecccC-CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEE
Q 005279 208 YTGSTN-ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVY 286 (704)
Q Consensus 208 YTG~~~-~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY 286 (704)
|++... .....+++|+|++.. ..|+... .+. +.+ ...|||.+++ ++||++||+.++..+. .+.+.
T Consensus 83 ~~~~~~~~~~~~igvA~Sd~p~----Gpf~~~~-~~~---~~~---~~~~Dp~vf~-DdDG~~Yl~~~~~~~~--~i~i~ 148 (265)
T cd08985 83 MHIDSSDYSDARVGVATSDTPT----GPYTYLG-SFR---PLG---YQSRDFGLFV-DDDGTAYLLYSDRDNS--DLYIY 148 (265)
T ss_pred EEeCCCCCcceeEEEEEeCCCC----CCCEECC-ccC---CCC---CCccCCceEE-cCCCCEEEEEecCCCC--ceEEE
Confidence 998642 234578899997653 5677642 221 222 3579999655 6789999999976422 23344
Q ss_pred E-eCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC---CCceEEEEEEeeCCcee
Q 005279 287 D-TKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD---DRHDYYAIGTYHEKNVT 362 (704)
Q Consensus 287 ~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~---~~~~~Y~iG~~d~~~~~ 362 (704)
+ ++|+..+.- .... .......|||.+|+.++ +++|..|... .....|++.+ + -.+.
T Consensus 149 ~L~~d~~~~~~--~~~~-~~~~~~~EaP~i~K~~g---------------~YYL~~S~~t~~~~~~~~y~~s~-s-~~GP 208 (265)
T cd08985 149 RLTDDYLSVTG--EVTT-VFVGAGREAPAIFKRNG---------------KYYLLTSGLTGWNPNDARYATAT-S-ILGP 208 (265)
T ss_pred EeCCCcccccc--eEEE-ccCCCccccceEEEECC---------------EEEEEEccCCCccCCceEEEEec-C-CCCC
Confidence 4 367777653 2221 11224789999999863 7888887642 1345677664 1 1245
Q ss_pred eec
Q 005279 363 WVP 365 (704)
Q Consensus 363 f~p 365 (704)
|+.
T Consensus 209 ~~~ 211 (265)
T cd08985 209 WTD 211 (265)
T ss_pred ccc
Confidence 653
No 24
>cd08979 GH_J Glycosyl hydrolase families 32 and 68, which for the clan GH-J. This glycosyl hydrolase family clan J (according to carbohydrate-active enzymes database (CAZY)) includes family 32 (GH32) and 68 (GH68). The overall sequence homology between the two families is low (<15% identity), but common sequence motifs have been identified. GH32 enzymes are invertases that also include other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named inverta
Probab=99.29 E-value=4.7e-11 Score=123.83 Aligned_cols=158 Identities=23% Similarity=0.301 Sum_probs=109.0
Q ss_pred CCCCCccccccccccee--ecC----CCCccCCCcceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccccc
Q 005279 108 YPWTNNMLSWQRTAFHF--QPQ----KNWMNDPNGPVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAM 180 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf--~P~----~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL 180 (704)
+..+..+..|.|+.--+ .|. .+.+-||+ +++.+ |+|||||..+... ......+++|+|+|++||+..+..+
T Consensus 37 ~a~S~D~~~w~~~~~~l~~~~~~~~~~~~~~~p~-v~~~~dg~~~~~Yt~~~~~-~~~~~~i~~A~S~D~~~w~~~~~~~ 114 (276)
T cd08979 37 AASSDDGTWWTRPPAPLPPGPPGSFDDGGVWTPS-VVRDPDGTYRMFYTGYDRP-KGAVQRIGLATSKDLIHWTKHGPNP 114 (276)
T ss_pred EEEcCCCCccEECCcCccCCCCCchhcCCeEcce-EEEcCCCeEEEEEecccCC-CCCcceEEEEECCCCCceEECCCCc
Confidence 44556667777665433 222 34466786 56667 9999999976532 2346789999999999999987654
Q ss_pred c-------cCCCCCCCcEEeeeEEEecC-CcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCC
Q 005279 181 V-------ADQWYDIMGVWTGSATILPD-GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGA 252 (704)
Q Consensus 181 ~-------Pd~~yD~~Gv~SGSavv~~d-G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~ 252 (704)
. +...++...+.++.++.+++ |+++|+|++........+.+|.|.|. .+|++....+ ....+...
T Consensus 115 ~~~~~~~~~~~~~~~~~~~dP~v~~~~~~g~y~m~~~~~~~~~~~~i~~a~S~D~-----~~W~~~~~~~--~~~~~~~~ 187 (276)
T cd08979 115 VPRWYESGNPGPWDDHAWRDPAVVRDEEGGGWRMYYGARDADERGAIGLATSPDL-----IHWTPVPPPP--GPRTGYDD 187 (276)
T ss_pred ceeeeecCCCCCcccccccccEEEEECCCCEEEEEEEeEccCCCcEEEEEECCCC-----CcceECCCCC--CCCCcccC
Confidence 2 22234455778898876544 89999999876544567889999884 8999864333 22222334
Q ss_pred cCccCCeeEEecCCCeEEEEEeee
Q 005279 253 KDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 253 ~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
..+.+|.++. .+|+|+|++.+.
T Consensus 188 ~~~e~P~~~~--~~g~~~l~~~~~ 209 (276)
T cd08979 188 GQLEVPQVVK--IDGRWYLLYSGR 209 (276)
T ss_pred CcCccceEEE--ECCEEEEEEEec
Confidence 5678999543 569999999876
No 25
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=99.23 E-value=8.6e-11 Score=126.52 Aligned_cols=159 Identities=23% Similarity=0.273 Sum_probs=109.8
Q ss_pred cceEECCE--EEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecc-cccccCCCCCCCcEEeeeEEEecCCcEEEEEeccc
Q 005279 136 GPVFYKGW--YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLP-LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGST 212 (704)
Q Consensus 136 G~~y~~G~--YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp-~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~ 212 (704)
|.+.++|. |||+|...-. ..+..+.|.|.|+|.+||+..+ +.|.|+..|+..||....++. .+|+++|+||+..
T Consensus 36 gai~~~~~~R~~l~yr~~~~--~~~~~~iglA~S~DGi~f~~~~~pil~P~~~~e~~GvEDPRVt~-i~d~yymtYta~~ 112 (312)
T PF04041_consen 36 GAIVFDGGLRVYLLYRAYGS--DIGSSRIGLARSDDGIHFERDPEPILYPDTDYEEWGVEDPRVTK-IDDTYYMTYTAYS 112 (312)
T ss_dssp EEEEETTE--EEEEEEEEES--SSSEEEEEEEEESSSSS-EE-SS-SBEE-SSTTHTEEEEEEEEE-ETTEEEEEEEEEE
T ss_pred cEEEECCeeEEEEEEEeECC--CCceeEEEEEEccCCcCceECCCCEEccCCCCcccCccceeEEE-ECCEEEEEEEEec
Confidence 56656666 8888865432 2233489999999999999876 579999999999999999975 6899999999987
Q ss_pred CCceeeEEEEEeCCCCCCccceeEeeCCCceecCCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 005279 213 NESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTK 289 (704)
Q Consensus 213 ~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~ 289 (704)
... ..+++|.|+|. .+|+|+. +++.+.. ......-+|-..+-.+.+|+|+|+.+ .+.+.+-.|+
T Consensus 113 ~~~-~~~~la~s~D~-----~~~~r~g--~~~~~~~~~~~~~~~~~kd~~lfp~ki~Gky~m~~r-----~~~i~la~S~ 179 (312)
T PF04041_consen 113 GKG-PRIGLATSKDF-----KHWERHG--KIFPPFNGNEDYRDFWSKDGALFPEKINGKYAMLHR-----DPSIWLAYSP 179 (312)
T ss_dssp SSS-EEEEEEEESSS-----SSEEEEE--CTTTTTCTS-EEEEEEEECCEEEESEETTEEEEEEE-----SSSBEEEEES
T ss_pred CCC-cccceEEccch-----HhhEEec--cccCcccccccccccccCceEEEEEEECCEEEEEEC-----CCCEEEEecC
Confidence 654 56899999994 9999985 2222111 01111225544222246899999998 3457788899
Q ss_pred CCCCcEEecc-eeccCCCCCceee
Q 005279 290 DFINYELLRG-VLHGVPNTGMWEC 312 (704)
Q Consensus 290 Dl~~W~~~~~-l~~~~~~~gmWEC 312 (704)
|+++|+.... ++. +..++||+
T Consensus 180 Dl~~W~~~~~~~~~--~~~~~~d~ 201 (312)
T PF04041_consen 180 DLIHWGNHREPLLS--PRPGWWDS 201 (312)
T ss_dssp SSSSEEEEBETSB----STTSSCS
T ss_pred Cccccccccccccc--CCCCcChh
Confidence 9999997655 432 33457887
No 26
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=99.23 E-value=1e-09 Score=114.94 Aligned_cols=185 Identities=21% Similarity=0.215 Sum_probs=125.5
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCC--CCcE-EeeeEEEecCCcEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYD--IMGV-WTGSATILPDGKLM 205 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD--~~Gv-~SGSavv~~dG~~~ 205 (704)
+..-||. +++++|.|+||+...+.. ..+..++|+||+||+..+.++.+....+ ..+. |.+.++ ..+|+++
T Consensus 8 ~~~~DP~-i~~~~~~yY~~~t~~~~~-----~~i~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yy 80 (286)
T PF04616_consen 8 GDYADPS-IVRFGDGYYLYGTTDPEG-----PGIPVWSSKDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIH-YINGKYY 80 (286)
T ss_dssp SSECSEE-EEEETTEEEEEEEEBTCE-----SBEEEEEESSSSSEEEEEECESSTTTTSTTTSETTEEEEEE-EETTEEE
T ss_pred CCCCCCE-EEEECCEEEEEEEcCCCC-----CeEEEEECCCCcccccceeeecccccccccccccccCCeEE-EcCCeEE
Confidence 5667996 788899999998776543 4578999999999999998776654322 3333 999986 5799999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC--eeEE
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR--TGIT 283 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~--~G~~ 283 (704)
|+|+.......+.+.+|++.+.. ..|+... .+.+. .....||.+++ .++|++||+.+..... .+.+
T Consensus 81 ~y~~~~~~~~~~~~~va~a~~~~----Gp~~~~~-~~~~~------~~~~iD~~vf~-d~dG~~Yl~~~~~~~~~~~~~i 148 (286)
T PF04616_consen 81 MYYSDSGGDAGSGIGVATADSPD----GPWTDPG-KIPIP------GGNSIDPSVFV-DDDGKYYLYYGSWDNGDPGGGI 148 (286)
T ss_dssp EEEEEESTSTTEEEEEEEESSTT----S-EEEEE-EEEEE------SSSSSSEEEEE-ETTSEEEEEEEESTTTSSEEEE
T ss_pred EEEEccCCCCCcceeEEEeCCcc----ccccccc-ceeec------cccccCceEEE-ecCCCcEEeCcccCCCccceeE
Confidence 99993333334668899998753 6888753 22222 23457999655 5669999999986432 2334
Q ss_pred EEEE-eCCCCCcEEec-cee-ccC--CCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 284 FVYD-TKDFINYELLR-GVL-HGV--PNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 284 llY~-S~Dl~~W~~~~-~l~-~~~--~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
.+.+ ++|...+.... ... ... ...+.-|+|-+|+.++ +++|..|.....
T Consensus 149 ~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~~~Egp~~~k~~g---------------~yYl~~s~~~~~ 202 (286)
T PF04616_consen 149 YIAELDPDGTSLTGEPVVVIFPGDEGWDGGVVEGPFVFKHGG---------------KYYLFYSAGGTG 202 (286)
T ss_dssp EEEEEETTTSSEEEEECEEEEEESGSSTTTBEEEEEEEEETT---------------EEEEEEEESGSS
T ss_pred EeecccCccccccCcccccccccccccCCccccceEEEEcCC---------------CEEEEEeccCCC
Confidence 4444 56777766544 222 221 1335899999999863 678888865433
No 27
>PF08244 Glyco_hydro_32C: Glycosyl hydrolases family 32 C terminal; InterPro: IPR013189 This domain corresponds to the C-terminal domain of glycosyl hydrolase family 32. It forms a beta sandwich module [].; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 1W2T_C 1UYP_A 3UGG_A 3UGH_B 3UGF_B ....
Probab=99.22 E-value=3.9e-11 Score=104.85 Aligned_cols=78 Identities=27% Similarity=0.394 Sum_probs=55.8
Q ss_pred cceEEEEEEcCCCCceeeEEEEEeeCCCCceeEeEEecCCCCCccccccccccceeeEeecCcchhhhhccccccccccc
Q 005279 514 GPFGLLVLADDSLSEQTPVYFYIAKGKDGSLKTYFCTDQSSTGRREILNESIGEHISCYCPNEHMYMLALSIESSQSIWN 593 (704)
Q Consensus 514 g~fGl~v~a~~~~~e~t~v~f~~~~~~dg~~~~~~~~Dr~rSs~~~~~~~~~G~~~~~~~Pv~~~~~~~l~~e~~~~~~~ 593 (704)
++|||.|+++.+.+|.|.|+|+..+ + .+++||++|+. ......++.+. ...|+. ..++.
T Consensus 9 ~~~g~~l~~s~~~~e~~~i~~d~~~---~----~l~vDR~~s~~-~~~~~~~~~~~-~~~~~~------~~~~~------ 67 (86)
T PF08244_consen 9 DSFGLRLRASNDGGEETSIGYDPAN---G----TLTVDRTNSGI-NDFSEEFGTFV-RSAPLD------LGDKI------ 67 (86)
T ss_dssp CEEEEEEEEETTSSSEEEEEEETTT---T----EEEEEETTSST-TSCCCEEEEEE-EEEETT------TTESE------
T ss_pred CCeEEEEEECCCccEEEEEEEECCC---C----EEEEeCCCCcc-cccccccCcce-EEeecc------CCCCc------
Confidence 3699999998888999999997543 2 38999999983 22223444411 133331 22344
Q ss_pred eEEEEEEEeCCeEEEEEeCC
Q 005279 594 IVYVYLQVDHSIVEGFAQGG 613 (704)
Q Consensus 594 ~l~LrI~VD~SivEvF~n~G 613 (704)
++||||||+|+||||+|||
T Consensus 68 -l~L~i~vD~SsvEiFvNdG 86 (86)
T PF08244_consen 68 -LKLRIFVDRSSVEIFVNDG 86 (86)
T ss_dssp -EEEEEEEETTEEEEEETTT
T ss_pred -EEEEEEEeCCEEEEEECCC
Confidence 7999999999999999997
No 28
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=99.20 E-value=1.2e-09 Score=115.70 Aligned_cols=178 Identities=17% Similarity=0.154 Sum_probs=114.3
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC--C----CCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW--Y----DIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~--y----D~~Gv~SGSavv~~dG 202 (704)
+.+-||. +++++|.|+||...... ...+..++|+||+||++++.+|.+... + ...++|.+.++. .+|
T Consensus 6 ~~~~DP~-i~~~~~~yy~~~t~~~~-----~~~i~~~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~~-~~g 78 (288)
T cd09000 6 GFYPDPS-ICRVGDDYYLVTSSFEY-----FPGVPIFHSKDLVNWELIGHALTRPSQLDLDGLPDSGGIWAPTIRY-HDG 78 (288)
T ss_pred CCCCCCC-EEEECCEEEEEECCccc-----CCCceEEECCCcCCcEEcccccCCcccccccCCCCCCceEcceEEE-ECC
Confidence 4667997 78889999998532111 235889999999999999988754321 1 345799999865 699
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC----
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN---- 278 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~---- 278 (704)
+++|+|++........+.+|.+++.. ..|+. |++.. ...+||.+++ .++|++||+.+....
T Consensus 79 ~yy~yy~~~~~~~~~~~~v~~s~~p~----gpw~~----~~~~~------~~~iDp~vf~-d~dG~~Y~~~~~~~~~~~~ 143 (288)
T cd09000 79 TFYLITTNVDGMKDGGNFIVTADDPA----GPWSD----PVWLD------SGGIDPSLFF-DDDGKVYLVGNGWDERRGY 143 (288)
T ss_pred EEEEEEEecCCCCCCceEEEEeCCCC----CCCcC----CEecC------CCccCCceeE-cCCCCEEEEecccCCcccc
Confidence 99999998753323456788887652 45652 33321 1458999665 578999999886421
Q ss_pred -CeeEEEEEEeCCCCCcEEeccee--ccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 279 -RTGITFVYDTKDFINYELLRGVL--HGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 279 -~~G~~llY~S~Dl~~W~~~~~l~--~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
..+.+.+.+. |...|+..+... .........|+|.+|+.++ +++|..|..
T Consensus 144 ~~~~~i~~~~l-~~~~~~~~~~~~~~~~~~~~~~~Egp~v~k~~g---------------~YYl~ys~~ 196 (288)
T cd09000 144 NGHGGIWLQEI-DLETGKLLGEPKVIWNGTGGRWPEGPHLYKRDG---------------WYYLLIAEG 196 (288)
T ss_pred CCCCcEEEEEE-ccccCCCCCCcEEEEeCCCCCCcccCeEEEECC---------------EEEEEEecC
Confidence 1223333333 333444433221 1111124689999998752 788877754
No 29
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=99.19 E-value=2.7e-09 Score=112.97 Aligned_cols=181 Identities=12% Similarity=0.066 Sum_probs=118.6
Q ss_pred CCccCCCcceEE--CCEEEEEEeeCCCCCCC-CCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEec-CCcE
Q 005279 129 NWMNDPNGPVFY--KGWYHLFYQYNPNGAIW-GDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILP-DGKL 204 (704)
Q Consensus 129 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~w-G~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~-dG~~ 204 (704)
+-+-||. +++. +|+||||+--.-....+ +.....+++|+||+||++...++.... ...++|...++.++ +|++
T Consensus 16 ~~~rDP~-I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~--~~~~~WAPev~~d~~~g~y 92 (276)
T cd08983 16 KGLRDPF-ILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPP--NAGNTWAPEAFWDAERGQY 92 (276)
T ss_pred CCccCCe-EEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCC--CcCcEeCccceEcCCCCeE
Confidence 4567997 5666 89999999754322122 456789999999999999887653211 24578999987654 7999
Q ss_pred EEEEecccCC-----ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC
Q 005279 205 MMLYTGSTNE-----SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR 279 (704)
Q Consensus 205 ~~~YTG~~~~-----~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~ 279 (704)
+|+|+..... ....+..|.+.| +.+|+.. .|++. ++ ....|+.++. .+|+|||++....+
T Consensus 93 ~~~~s~~~~~~~~~~~~~~i~~~tt~D-----f~tft~p--~~~~~--~~---~~~ID~~v~~--~~g~~Yl~~k~~~~- 157 (276)
T cd08983 93 VVYWSSRLYDNTGGFYNYRLYATTTSD-----FVTFTEP--KVWID--LG---ANVIDTTVVK--VGGTYYRFYKNEGS- 157 (276)
T ss_pred EEEEecccCCCCCCCccEEEEEEecCc-----ccccCCC--eEeec--CC---CCeEeeEEEE--eCCEEEEEEecCCC-
Confidence 9999987542 122333344434 3788752 56665 22 3568998653 35999999865432
Q ss_pred eeEEEEEEeCCCC-CcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 280 TGITFVYDTKDFI-NYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 280 ~G~~llY~S~Dl~-~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
+.+.+.+|++|. .|+...... ......-|-|.+|+..+. .+|+|.++.
T Consensus 158 -~~i~~~~s~~l~g~~~~~~~~~--~~~~~~~EgP~v~k~~~~-------------~~y~L~~d~ 206 (276)
T cd08983 158 -KDIELARSKSLTGPWTIVGTGD--AGWGGAVEGPTVFKLNNG-------------GGWYLYGDN 206 (276)
T ss_pred -CcEEEEEeCCCCCCceEecccc--cCCCCceeCCeEEEECCC-------------CEEEEEEEE
Confidence 346677888876 677644321 111236899999999742 267777654
No 30
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=99.17 E-value=1.7e-09 Score=116.33 Aligned_cols=186 Identities=15% Similarity=0.265 Sum_probs=121.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCC---------CCCCcEEEEEEeCCCcceeecccccccC--CCCCCCcEEeeeEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGA---------IWGDIVWGHAVSKDLIHWYHLPLAMVAD--QWYDIMGVWTGSAT 197 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~---------~wG~~~WGHAvS~DLvhW~~lp~AL~Pd--~~yD~~Gv~SGSav 197 (704)
.+.-||. ++.++|+|+||....-... .+....+-..+|+||+||+.++.++.|. ..| ..++|.+.++
T Consensus 7 ~~~aDP~-~~~~~g~yY~~~t~~~~~~~~~~~~~~~~~~~~~i~v~~S~DL~~W~~~g~v~~~~~~~~w-~~~~WAP~v~ 84 (311)
T cd09003 7 RYGADPT-AVVYNGRVYVYTTNDDYEYDSNTIKDNNYYNINDITVISSDDMVNWTDHGEIFVPNGIAKW-AGNSWAPSIA 84 (311)
T ss_pred CccCCCC-eEEECCEEEEEeCCCCccccccccccCCccccCcEEEEECCCCCCcEEcccccCcCCCCCc-ccccCCCceE
Confidence 4567997 5788999999987643321 2223467788999999999999888632 233 3478999986
Q ss_pred EecC----CcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC-CCCCCcC-ccCCeeEEecCCCeEEE
Q 005279 198 ILPD----GKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP-PGIGAKD-FRDPTTAWLTSEGKWRI 271 (704)
Q Consensus 198 v~~d----G~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p-~g~~~~~-fRDP~Vvw~~~~g~w~M 271 (704)
. .+ |+++|+|+.. ...+++|+|+++. ..|+...+.|++... ++..... -.||.+++ ++||++||
T Consensus 85 ~-~~~~~~gkyylyy~~~----~~~igva~SdsP~----GP~~~~~g~~l~~~~~~~~~~~~~~iDp~~f~-DdDG~~Yl 154 (311)
T cd09003 85 V-KKINGKGKFYLYFANG----GGGIGVLTADSPV----GPWTDPLGKPLITGSTPGCAGVVWLFDPAVFV-DDDGQGYL 154 (311)
T ss_pred E-eccCCCCEEEEEEecC----CCeEEEEEcCCCC----CCcccCCCCeeecCCCCCccCCccccCCCeEE-CCCCCEEE
Confidence 4 56 9999999864 2347899987652 579876567877642 3322122 36999655 67899999
Q ss_pred EEeeecC-----CeeEEEEEE-eCCCCCcEEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 272 AIGSRIN-----RTGITFVYD-TKDFINYELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 272 v~Gs~~~-----~~G~~llY~-S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
+.|+... ..+.+.+.+ ++|+..-. ++... ......+|.|-+++.++ +++|..|..
T Consensus 155 ~~g~~~~~~~~~~~~~i~i~~l~~D~~~~~--g~~~~-i~~~~~~Egp~~~K~~G---------------~YYL~ys~~ 215 (311)
T cd09003 155 YFGGGVPGGRWANPNTARVIKLGDDMISVD--GSAVT-IDAPYFFEASGLHKING---------------TYYYSYCTN 215 (311)
T ss_pred EECCccCCCccccCCCEEEEEeCCCceecc--CCceE-ccCCCceEeeeEEEECC---------------EEEEEEeCC
Confidence 9985321 112333444 34665422 22211 01124799999998752 677877754
No 31
>cd08992 GH43_like_1 Glycosyl hydrolase family 43, uncharacterized proteins. This subfamily is glycosyl hydrolase family 43 (GH43)-like and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=99.05 E-value=6e-09 Score=113.48 Aligned_cols=192 Identities=17% Similarity=0.195 Sum_probs=122.3
Q ss_pred CCCCCcccccccccceeecC-CC-C----ccCCCcceEECCEEEEEEeeCCCC-CCCCCcEEEEEEeCCCc-ceeecc-c
Q 005279 108 YPWTNNMLSWQRTAFHFQPQ-KN-W----MNDPNGPVFYKGWYHLFYQYNPNG-AIWGDIVWGHAVSKDLI-HWYHLP-L 178 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~-~g-W----mNDPNG~~y~~G~YHLFYQ~nP~~-~~wG~~~WGHAvS~DLv-hW~~lp-~ 178 (704)
+..+..+..|.|-..=|.+. .+ | +--|. +++++|+|||||+..-.. ..-+..+.|+|+|.|.. .|+++. +
T Consensus 83 ~A~S~Dgv~W~~~g~~L~~~~~g~Wd~~~vwaP~-Vi~~dGkyYM~Ysa~~~~~~~~~~~~IGvA~AdSp~GpWtr~d~P 161 (349)
T cd08992 83 HATSKDGWTWKEEGPAIGRGEKGAYDDRSVFTPE-VLEHEGTYYLVYQVVKSPYLNRSFESIAMAVADSPYGPWTKSDEP 161 (349)
T ss_pred EEECCCCCCceECCccccCCCCCCccccceECcE-EEEECCEEEEEEEecccccCCCCcceEEEEEECCcccccccCCCc
Confidence 33345566887766333221 22 3 33464 678899999999953211 11123577999988877 698764 3
Q ss_pred ccccCC------------------CCCCCcEEeeeEEEecCCcEEEEEecccC-------CceeeEEEEEeCCCCCCccc
Q 005279 179 AMVADQ------------------WYDIMGVWTGSATILPDGKLMMLYTGSTN-------ESVQVQNLAYPADPSDPLLI 233 (704)
Q Consensus 179 AL~Pd~------------------~yD~~Gv~SGSavv~~dG~~~~~YTG~~~-------~~~q~q~lA~S~D~~D~~l~ 233 (704)
.|.|.. .+|..++...++ +..+|+++|||+|+.. ...+.+++|+++++- .
T Consensus 162 il~p~~dg~w~~d~~~~~~~~~~g~wD~~~v~~P~v-~~~~g~yyL~Y~G~~~g~~~~~~~~~~~iGvAvAdsP~----G 236 (349)
T cd08992 162 ILSPSNDGIWKGDEDNRFLVKKKGSFDSHKVHDPCL-FPFNGKFYLYYKGEQMGEEMTMGGRETKWGVAIADDPE----G 236 (349)
T ss_pred EecCCcCCceeeccCceeEeccCCCcccCceECCEE-EEECCEEEEEEEccccCcccccCCCCceEEEEEECCCC----C
Confidence 455542 356777777776 4679999999999752 124679999998863 6
Q ss_pred eeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeE-EEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceee
Q 005279 234 KWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKW-RIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWEC 312 (704)
Q Consensus 234 ~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w-~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWEC 312 (704)
.|+|.+.|||+.. .+ ..+ +|... +.+ .|+.. .....|. +..|+|.++|+....+.....-.|..+|
T Consensus 237 Pf~r~~~nPi~~~------~~--~~~-~~~~~-~~~~~~~~~-d~~~~~~--~~~~~dg~~~~~~~~~~~~~~~~~~~~~ 303 (349)
T cd08992 237 PYVKSPYNPITNS------GH--ETC-VWQYK-GGIAAMLTT-DGPEKNT--IQFAPDGINFEIMAHIKGAPEAIGPYRR 303 (349)
T ss_pred CCEeCCCCcccCC------CC--ceE-EEecC-CceEEEEec-cCCCCce--EEeCCCCccEEEeeeccCCCccccCccC
Confidence 7999999999852 12 236 79654 455 45543 2222344 4679999999987766443223456677
Q ss_pred eeeEEc
Q 005279 313 VDFYPV 318 (704)
Q Consensus 313 Pdlf~l 318 (704)
||-+.-
T Consensus 304 ~~~~~~ 309 (349)
T cd08992 304 PDADED 309 (349)
T ss_pred cccccC
Confidence 765544
No 32
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=98.96 E-value=4.2e-08 Score=103.81 Aligned_cols=129 Identities=21% Similarity=0.253 Sum_probs=88.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC-------CCCcEEeeeEEEecCCcEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY-------DIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y-------D~~Gv~SGSavv~~dG~~~ 205 (704)
||. ++.++|+|+||.-. + .+..++|+||+||+..+.+|.+...+ ...++|...++ ..+|+++
T Consensus 2 DP~-vi~~~~~YY~~~T~-~--------g~~v~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 70 (279)
T cd08988 2 DPV-IIKEGDTWYVFGTG-P--------GITILSSKDLVNWTYSGSAFATEPTWKKRVPPSFDGHLWAPDIY-QHNGKFY 70 (279)
T ss_pred CCE-EEEECCEEEEEEec-C--------CEEEEECCCcCCccccCccccCCCccccccCCCCCCCEecceEE-EECCEEE
Confidence 896 67889999998653 1 36789999999999999888543221 23579999986 4689999
Q ss_pred EEEecccCC-ceeeEEEEEeCCCCCCcc-ceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 206 MLYTGSTNE-SVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 206 ~~YTG~~~~-~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|+|++.... ..+.+++|++++...|-- ..|++ ..|++.+.... ...-.||.+++ ++||++||+.|+.
T Consensus 71 lyys~~~~~~~~~~igva~s~~p~Gp~~~~~w~~--~~~i~~~~~~~-~~~~iDp~~f~-DdDG~~Yl~~g~~ 139 (279)
T cd08988 71 LYYSVSAFGSNTSAIGLAVNKTIDGPSPDYGWEK--GGVVISSDASD-NYNAIDPAIIF-DQHGQPWLSFGSF 139 (279)
T ss_pred EEEEeccCCCCCceEEEEEcCCCCCCCcCcCccc--cCceEecCCCC-CCCccCCceEE-cCCCCEEEEeccc
Confidence 999986532 246678999987532210 12432 25666532111 12347999655 6789999999863
No 33
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.94 E-value=5.6e-08 Score=103.74 Aligned_cols=135 Identities=18% Similarity=0.144 Sum_probs=93.3
Q ss_pred CCccCCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCC-CCCCCcEEeeeEEEecCCcEE
Q 005279 129 NWMNDPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQ-WYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 129 gWmNDPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 205 (704)
.++-||. ++++ +|.||||.-............+.+.+|+||+||+..+.++.+.. .+...++|...++ ..+|+++
T Consensus 4 ~~~~DP~-v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~-~~~G~yy 81 (291)
T cd08981 4 IRIRDPF-ILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVH-EYKGRYY 81 (291)
T ss_pred ccccCCE-EEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeee-eeCCEEE
Confidence 4578997 6777 99999998654322111124579999999999999998886543 3345679999985 5799999
Q ss_pred EEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 206 MLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 206 ~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
|+|+..... ....+.+|++++.- ..|+.....|+... + ....||.+ +.+++|++||+.+.
T Consensus 82 ly~s~~~~~~~~~~~~va~s~~p~----GP~~~~~~~~~~~~--~---~~~iDp~~-f~DdDG~~Yl~~~~ 142 (291)
T cd08981 82 MFATFHNPGGERRGTAILVSDSPE----GPFVPHSDGPVTPE--D---WMCLDGTL-YVDEDGKPWMVFCH 142 (291)
T ss_pred EEEEeccCCCceeeEEEEECCCCC----CCCEeCCCCccCCC--C---CceEcCce-EEcCCCCEEEEEEe
Confidence 999876543 22346788887642 46876543454321 1 23479985 44678999999874
No 34
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=98.79 E-value=4e-07 Score=95.97 Aligned_cols=125 Identities=18% Similarity=0.127 Sum_probs=86.8
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCC------CCCcEEeeeEEEecCC
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWY------DIMGVWTGSATILPDG 202 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~y------D~~Gv~SGSavv~~dG 202 (704)
+..-||. +++++|.|+||+..... .......+|+||+||+..+.++...... ...++|...++ ..+|
T Consensus 6 ~~~~DP~-ii~~~~~yY~~~t~~~~-----~~g~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~WAP~v~-~~~G 78 (269)
T cd08989 6 GDNPDPS-IIRAGDDYYMASSTFEW-----FPGVQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIWAPCLS-YYDG 78 (269)
T ss_pred CCCCCCc-EEEECCeEEEEECcccc-----CCCcEEEECCccCCCEEccccccCccccccccCCCCCcEEcceEE-EECC
Confidence 4566996 78899999999853211 1235678999999999988776532111 23579999885 5799
Q ss_pred cEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 203 KLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 203 ~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
+++|+|+.........+++|++++.. ..|+. |+... ..-.||.+++ +++|+.||+.++
T Consensus 79 ~yy~yy~~~~~~~~~~i~va~sd~~~----Gpw~~----~~~~~------~~~IDp~~f~-D~dG~~Yl~~~~ 136 (269)
T cd08989 79 KFWLIYTAVKVWKDCHNYLFTAEDIT----GPWSR----PIFLN------YGGFDPSLFH-DDDGKKYLINMG 136 (269)
T ss_pred EEEEEEeccccCCCceEEEEEECCCC----CCCcC----CEECC------CCcccCceEE-cCCCCEEEEecC
Confidence 99999998754333567889887653 35653 44331 1347999655 679999999875
No 35
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.77 E-value=4.6e-07 Score=96.00 Aligned_cols=187 Identities=14% Similarity=0.089 Sum_probs=111.9
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc--cCCC-CCCCcEEeeeEEEecCCcEEEEEe
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV--ADQW-YDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~--Pd~~-yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
||. ++.+++.|+||+--.. .....++|+||+||+.....+. +..+ ....++|...+. ..+|+++|+|+
T Consensus 2 DP~-v~~~~d~yY~~~T~~~-------~~~~i~~S~dl~~w~~~~~~~~~~~~~~~~~~~~~WAP~i~-~~~g~yylyys 72 (288)
T cd08980 2 DPW-VIRHDGYYYFTATTGE-------DRIELRRSDTLAGLATAESKVVWTPPDSGPYSGNLWAPELH-YIDGKWYIYFA 72 (288)
T ss_pred CCe-EEEECCEEEEEEEeCC-------CcEEEEecCChhHhhcCCcEEEecCCCCCCccccEECceEE-EECCEEEEEEE
Confidence 896 6778899999975321 4478999999999998754322 2221 234689999986 57899999999
Q ss_pred cccC--CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC---CeeEEE
Q 005279 210 GSTN--ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN---RTGITF 284 (704)
Q Consensus 210 G~~~--~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~---~~G~~l 284 (704)
.... ...+.+++|.+++..++ +..|+.. .+++... + ..-.||.++. + +|++||+.+.... ....+.
T Consensus 73 ~~~~~~~~~~~~~v~~a~~~~~~-~Gpw~~~--~~~~~~~-~---~~~iDp~~~~-d-dG~~Yl~~~~~~~~~~~~~~i~ 143 (288)
T cd08980 73 AGDGGGNANHRMYVLENAGADPP-TGPWTFK--GRLADPT-D---RWAIDGTVFE-H-NGQLYFVWSGWEGRTNGNQNLY 143 (288)
T ss_pred ccCCCCCcceeEEEEEeCCCCCC-CCCceEe--eEeccCC-C---CeeeeeEEEE-E-CCEEEEEEEccCCCCCCCccEE
Confidence 8764 23466778887652123 4679874 3443211 1 1236999543 3 5999999875421 122344
Q ss_pred EEEeCCCCCcEEecce-eccCCC-------CCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCCceEEEEE
Q 005279 285 VYDTKDFINYELLRGV-LHGVPN-------TGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDRHDYYAIG 354 (704)
Q Consensus 285 lY~S~Dl~~W~~~~~l-~~~~~~-------~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~~~~Y~iG 354 (704)
+-+.++...+. +.. ....+. .+.-|-|.+++.++ +++|..|........|.+|
T Consensus 144 ~~~l~~~~~~~--g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G---------------~yYl~yS~~~~~~~~Y~v~ 204 (288)
T cd08980 144 IAKMSNPWTLT--GPRVLISRPEYDWERQGPGVNEGPAALKRNG---------------KVFLTYSASGSWTPDYCLG 204 (288)
T ss_pred EEECCCCCccC--CcceEecCCCCCceecCceeeECcEEEEECC---------------EEEEEEECCCCCCCCCEEE
Confidence 44544433332 221 111111 12457777777642 6777777655434456555
No 36
>cd08993 GH43_DUF377 Glycosyl hydrolase family 43 containing a domain of unknown function. This subfamily has sequences similar to the glycosyl hydrolase family 43 (GH43) and contains uncharacterized proteins. GH43 proteins are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the GH43 enzymes display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.73 E-value=8.2e-08 Score=100.70 Aligned_cols=98 Identities=24% Similarity=0.379 Sum_probs=75.5
Q ss_pred eeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCC--CCCCCcCccCCeeEEecCCCeEEE
Q 005279 194 GSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDPTTAWLTSEGKWRI 271 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP~Vvw~~~~g~w~M 271 (704)
..++ ..||+++|+||+........+++|+|.|+ ++|++.+ +|+|.++ ...+...++||.|+. .+|+|+|
T Consensus 3 P~v~-~~~G~y~l~y~~~~~~~~~~ig~A~S~Dg-----~~~~~~~-~~~i~p~~~~~~~~~gv~dP~v~~--~~g~y~m 73 (268)
T cd08993 3 PAVV-YDNGEFYLLYRAAGNDGVIRLGLARSRDG-----LHFEIDP-DPPVWPPPEDGFEEGGVEDPRIVK--IDDTYYI 73 (268)
T ss_pred CeEE-EECCEEEEEEEEECCCCceEEEEEEECCC-----ceEEECC-cceEcCCCCCcccccCccCcEEEE--ECCEEEE
Confidence 3454 57999999999876555678999999995 8999975 5666542 234567889999653 5889999
Q ss_pred EEeeec--CCeeEEEEEEeCCCCCcEEecce
Q 005279 272 AIGSRI--NRTGITFVYDTKDFINYELLRGV 300 (704)
Q Consensus 272 v~Gs~~--~~~G~~llY~S~Dl~~W~~~~~l 300 (704)
++++.. .....+.+++|+|+.+|++.+..
T Consensus 74 ~Yta~~~~~~~~~i~lA~S~D~~~W~~~~~~ 104 (268)
T cd08993 74 TYAARPNAPNGTRIGLATTKDFITFERLGTS 104 (268)
T ss_pred EEEccCCCCCCcEEEEEEeCCcceEEEeccc
Confidence 998865 34457889999999999998654
No 37
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=98.72 E-value=4.7e-07 Score=95.44 Aligned_cols=170 Identities=15% Similarity=0.100 Sum_probs=107.4
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCC-----------CCCCcEEeeeEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQW-----------YDIMGVWTGSAT 197 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~-----------yD~~Gv~SGSav 197 (704)
++.-||. +++++|+|++|.-..-. ...+...+|+||+||+..+.++....+ --..++|...++
T Consensus 9 ~~~~DP~-v~~~~~~yY~~~t~~~~-----~~gi~v~~S~Dl~~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~WAP~v~ 82 (269)
T cd09001 9 ADYPDPD-VIRVGDDYYMVSTTMHY-----SPGAPILHSKDLVNWEIIGYVYDRLDDGDAYNLENGGNAYGKGQWAPSLR 82 (269)
T ss_pred CCCCCCe-EEEECCEEEEEECCccc-----CCCCEEEEcccccCCeEcccccccccccccccccccCCCCCCCEECCceE
Confidence 4557996 67889999999753211 123567899999999998877643211 013479999986
Q ss_pred EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 198 ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
. .+|+++|+|+... +.+.+|++++.. ..|+.. +++ ....||.+++ +++|+.||+.++.
T Consensus 83 ~-~~gkyy~yys~~~----~~~~v~~a~~p~----Gpw~~~--~~~---------~~~iDp~~f~-D~dG~~Yl~~~~~- 140 (269)
T cd09001 83 Y-HNGTFYVFFCTNT----GGTYIYTADDPE----GPWTKT--ALD---------GGYHDPSLLF-DDDGTAYLVYGGG- 140 (269)
T ss_pred E-ECCEEEEEEEecC----CCeEEEEcCCCC----CCCcCC--CcC---------CCcccCceEE-cCCCCEEEEeCCC-
Confidence 4 6999999999862 346788877642 457543 111 1347999655 5789999998753
Q ss_pred CCeeEEEEE-EeCCCCCcEEecceeccCCC--CCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 278 NRTGITFVY-DTKDFINYELLRGVLHGVPN--TGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 278 ~~~G~~llY-~S~Dl~~W~~~~~l~~~~~~--~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+ +.+. -++|+....-....+...+. .+.-|-|.+++-++ +++|..|...
T Consensus 141 ---~-i~~~~l~~d~~~~~~~~~~~~~~~~~~~~~~Egp~i~k~~G---------------~YYl~~S~~~ 192 (269)
T cd09001 141 ---T-IRLVELSPDLTGVGGKDQVIIDAGEEIGLGAEGSHLYKING---------------YYYIFNIAWG 192 (269)
T ss_pred ---c-EEEEEECcccCCcCCCceEEEeCCCccccccccCeEEEECC---------------EEEEEEecCC
Confidence 2 2223 25676655211112211111 23678888887542 6778777543
No 38
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=98.71 E-value=5.8e-07 Score=99.53 Aligned_cols=185 Identities=19% Similarity=0.186 Sum_probs=116.1
Q ss_pred cCCCcceE-ECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCCc----ceeecccccccCCCC-CCCcEEeeeEEEec-
Q 005279 132 NDPNGPVF-YKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDLI----HWYHLPLAMVADQWY-DIMGVWTGSATILP- 200 (704)
Q Consensus 132 NDPNG~~y-~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DLv----hW~~lp~AL~Pd~~y-D~~Gv~SGSavv~~- 200 (704)
-|+.|=+. ++|+.-+|-.--|.. ..|+.-|+++.-|++.. +|++.+.++.....+ ...--|||||+++.
T Consensus 63 qd~~G~~~~~~Gy~vvfaL~a~r~~~~~~Rh~~A~I~~fY~k~G~~~~~~W~~~G~vf~~g~~~~~~s~EWSGSA~l~~~ 142 (428)
T PF02435_consen 63 QDADGNVVNYNGYQVVFALTADRHEDPDDRHDDARIYLFYSKDGDNANDGWKNGGPVFPEGASFVPGSREWSGSATLNND 142 (428)
T ss_dssp E-TTSSBEEBTTEEEEEEEEE-TT--GGGCSCGEEEEEEEEETT--SGGG-EEEEESS-TTCCCCGCEEEEEEEEEESTT
T ss_pred ecccccEEEECCEEEEEEEecCCccCCccccCCcEEEEEEecCCCCccCCceECcccCCCCCCCCccCcEecCceEEcCC
Confidence 35666444 699777787766653 35678999999999999 999999877555431 23457999999887
Q ss_pred CCcEEEEEecccC----Cceee---EE--EEEeCCCCCCccceeEeeCCCceecCCCCC--------CCcCccCCeeEEe
Q 005279 201 DGKLMMLYTGSTN----ESVQV---QN--LAYPADPSDPLLIKWVKYPGNPVLVPPPGI--------GAKDFRDPTTAWL 263 (704)
Q Consensus 201 dG~~~~~YTG~~~----~~~q~---q~--lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~--------~~~~fRDP~Vvw~ 263 (704)
||++.||||.... ...|. ++ ++...+. ...+..|.++ ..++. +.|. ....||||+++-.
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~-~v~i~g~~~~--~~lfe-~DG~~Yqt~~Q~~~~afRDP~~f~D 218 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDD-GVWITGFSNH--HELFE-GDGKHYQTYEQNPGYAFRDPHVFED 218 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECST-EEEEEEEEEE--EEEES---SSSB--HHHHHH---EEEEEEEE
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCC-ceeEccccce--eEeec-cchhhhhChhhcCCccccCCeeEEC
Confidence 8999999998542 21222 22 3333332 2233445544 34554 4432 1267999996543
Q ss_pred cCCCeEEEEEeeec---C------------------------------CeeEEEEEEeCC--CCCcEEecceeccCCCCC
Q 005279 264 TSEGKWRIAIGSRI---N------------------------------RTGITFVYDTKD--FINYELLRGVLHGVPNTG 308 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~---~------------------------------~~G~~llY~S~D--l~~W~~~~~l~~~~~~~g 308 (704)
..+|+-||+.-+.. + ..|++.+.+.+| +..|+++++|+.+..=..
T Consensus 219 P~~G~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~~~~w~~~~PL~~a~~v~d 298 (428)
T PF02435_consen 219 PEDGKRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDDGTVWELLPPLLSANGVND 298 (428)
T ss_dssp TTTTEEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTTTSEEEEEEEEEEETTTBS
T ss_pred CCCCcEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCCCCccEEeCcceecccccc
Confidence 36898888874431 0 257777777654 568999999998754345
Q ss_pred ceeeeeeEEcCC
Q 005279 309 MWECVDFYPVST 320 (704)
Q Consensus 309 mWECPdlf~l~~ 320 (704)
+.|=|+++++++
T Consensus 299 e~ERP~iv~~~g 310 (428)
T PF02435_consen 299 ELERPHIVFMNG 310 (428)
T ss_dssp -EEEEEEEEETT
T ss_pred cccCCcEEEECC
Confidence 899999999973
No 39
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.66 E-value=9e-07 Score=93.34 Aligned_cols=130 Identities=19% Similarity=0.191 Sum_probs=85.8
Q ss_pred CccCCCcceEE-CCEEEEEEeeCCCCC----CC-CCcEEEEEEeCCCcceeecccccccCCC------------CCCCcE
Q 005279 130 WMNDPNGPVFY-KGWYHLFYQYNPNGA----IW-GDIVWGHAVSKDLIHWYHLPLAMVADQW------------YDIMGV 191 (704)
Q Consensus 130 WmNDPNG~~y~-~G~YHLFYQ~nP~~~----~w-G~~~WGHAvS~DLvhW~~lp~AL~Pd~~------------yD~~Gv 191 (704)
||-||. ++.. +|.|+|+.-....+. .| ..-..-.++|+||+||+..+.++..... ....++
T Consensus 1 ~~rDP~-v~~~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~ 79 (269)
T cd08986 1 WIRDTY-VTLGPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAV 79 (269)
T ss_pred CCcCCe-EEecCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCc
Confidence 688997 4555 679999887442221 01 1234668999999999998877754321 124578
Q ss_pred EeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCC-ceecCCCCCCCcCccCCeeEEecCCCeE
Q 005279 192 WTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGN-PVLVPPPGIGAKDFRDPTTAWLTSEGKW 269 (704)
Q Consensus 192 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~n-PVl~~p~g~~~~~fRDP~Vvw~~~~g~w 269 (704)
|...+. ..+|+++|+|+..... ....+.+|++++.. ..|+..... |+ ..-.||.++ .+++|++
T Consensus 80 WAP~v~-~~~g~yyl~~s~~~~~~~~~~i~va~a~~p~----Gp~~~~~~~~~~---------~~~iD~~~f-~D~DG~~ 144 (269)
T cd08986 80 WAPELH-YIKGRWYLVACMNNPGYGGSSILLSTSGKIE----GPYKHITGNKPL---------FPGIDPSLF-EDDDGKV 144 (269)
T ss_pred CCceEE-EECCEEEEEEEccCCCCCceEEEEEeCCCCC----CCcEeccCCCCC---------CCccCCceE-EcCCCCE
Confidence 988885 4689999999976432 23456778776542 457764322 11 124699954 4678999
Q ss_pred EEEEee
Q 005279 270 RIAIGS 275 (704)
Q Consensus 270 ~Mv~Gs 275 (704)
||+.++
T Consensus 145 Yl~~~~ 150 (269)
T cd08986 145 YLVWHN 150 (269)
T ss_pred EEEeeC
Confidence 999875
No 40
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=98.54 E-value=3.6e-06 Score=89.16 Aligned_cols=211 Identities=16% Similarity=0.278 Sum_probs=130.2
Q ss_pred ccccccceeecCCCC---ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc---cCCCCCCC
Q 005279 116 SWQRTAFHFQPQKNW---MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV---ADQWYDIM 189 (704)
Q Consensus 116 ~w~Rp~~Hf~P~~gW---mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~---Pd~~yD~~ 189 (704)
+|--..--.+|..|| +-||- .++++|+||+|--... + ..|+-+-+. |+||...+.|+. .... ...
T Consensus 6 ~w~stg~l~~pk~~~~~~lkDPt-iv~~nGkYyvYgT~~~-~-----~~~~s~~~S-f~~Ws~~g~A~q~~l~~~~-~~~ 76 (303)
T cd08987 6 RWTSTGPLISPKSDWIVAIKDPT-VVYYNGRYHVYATTAD-A-----GNYGSMYFN-FTDWSQAASATQYYLQNGN-MTG 76 (303)
T ss_pred eeccCCccccCCCCCeeeecCCe-EEEECCEEEEEEccCC-C-----CCceeeeec-ccCHhHhccchhhcccCCC-CCc
Confidence 444445567888999 78997 5788999999966543 1 224333333 999998887763 1111 234
Q ss_pred cEEeeeEE-EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCe
Q 005279 190 GVWTGSAT-ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGK 268 (704)
Q Consensus 190 Gv~SGSav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~ 268 (704)
+.|...+. +.+++++||+|+- + ..+.|++.|..+| ..|... .|++...........-|++|+ .++++
T Consensus 77 ~fwAPqVfyf~pk~kwYL~Yq~---~---~~~yaTs~dp~~P--~~ws~~--qpl~~~~~~~~~~~~ID~~vI--~Dd~~ 144 (303)
T cd08987 77 YRVAPQVFYFAPQNKWYLIYQW---W---PAAYSTNSDISNP--NGWSAP--QPLFSGTPNGSPGGWIDFWVI--CDDTN 144 (303)
T ss_pred ccccCEEeeeccCCEEEEEEec---C---ceEEEeCCCCCCC--CccCCC--cccccCcccCCCCCccceeEE--eCCCC
Confidence 57888764 2689999999994 1 2568899888776 457653 677653222223456899974 46888
Q ss_pred EEEEEeeecCCeeEEEEEEeC-CCCCcE--Eec--ceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEee
Q 005279 269 WRIAIGSRINRTGITFVYDTK-DFINYE--LLR--GVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASM 343 (704)
Q Consensus 269 w~Mv~Gs~~~~~G~~llY~S~-Dl~~W~--~~~--~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~ 343 (704)
.||+... . .| .+|+++ .+.+.- +.. .+..........|-|..|++.+. .+++|+++.
T Consensus 145 ~YLff~~-d--nG--~iyra~~~~~nFp~~~~~~~~~~~~~~~~~lfEa~~Vykv~G~-------------~~YlmiveA 206 (303)
T cd08987 145 CYLFFSD-D--NG--KLYRSSTTLGNFPNGGTETVIIMSDSNKNNLFEASNVYKVKGQ-------------NQYLLIVEA 206 (303)
T ss_pred EEEEEec-C--CC--eEEEEecchhhCCCCCCccEEEecCCCccccceeeEEEEECCC-------------eEEEEEEEe
Confidence 8888753 2 34 367764 222211 101 11111111248999999999742 378888888
Q ss_pred CCCCceEEEEEEeeC--CceeeecC
Q 005279 344 DDDRHDYYAIGTYHE--KNVTWVPD 366 (704)
Q Consensus 344 ~~~~~~~Y~iG~~d~--~~~~f~p~ 366 (704)
.+..+..|+++ |-. -.+.|+|.
T Consensus 207 ~g~~~~rYfrs-~Ts~Sl~GpWt~~ 230 (303)
T cd08987 207 IGSDGGRYFRS-WTATSLDGPWTPL 230 (303)
T ss_pred cCCCCCCeEEE-EEcCCCCCCceec
Confidence 77644457777 332 23466654
No 41
>cd08994 GH43_like_2 Glycosyl hydrolase 43-like family consists of hypothetical proteins. This subfamily mostly contains uncharacterized proteins similar to glycosyl hydrolase family 43 (GH43) which includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, f
Probab=98.53 E-value=7.9e-07 Score=94.14 Aligned_cols=107 Identities=23% Similarity=0.350 Sum_probs=80.3
Q ss_pred CCCcceEECCEEEEEEeeCCCC----CCCCCcEEEEEEeCCC-cceeec-ccccccCC-CCCCCcEEeeeEEEecCCcEE
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNG----AIWGDIVWGHAVSKDL-IHWYHL-PLAMVADQ-WYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~----~~wG~~~WGHAvS~DL-vhW~~l-p~AL~Pd~-~yD~~Gv~SGSavv~~dG~~~ 205 (704)
+|. +++++|+|||||..+... ...++...|+|+|+|+ -+|+.+ .++|.|.. .||..+++.++++...+|+++
T Consensus 82 ~P~-vi~~~g~yyl~Y~~~~~~~~~~~~~~~~~ig~a~s~~~~g~w~~~~~pvl~~~~~~~~~~~~~~p~v~~~~~g~~~ 160 (291)
T cd08994 82 NPT-IKRFDGKYYLYYIGNTDPGPRPGHRNNQRIGVAVSDSLDGPWKRSDQPILEPRPGGWDNLITSNPAVTRRPDGSYL 160 (291)
T ss_pred CCe-EEEECCEEEEEEEcccCCcccccCCCCceEEEEEeCCCCCCcEECCCceecCCCCccccccccCCCeEEeCCCCEE
Confidence 574 577899999999976531 1224578999999994 699984 45566644 367788999998765589999
Q ss_pred EEEecccCC---ceeeEEEEEeCCCCCCccceeEeeCCCcee
Q 005279 206 MLYTGSTNE---SVQVQNLAYPADPSDPLLIKWVKYPGNPVL 244 (704)
Q Consensus 206 ~~YTG~~~~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl 244 (704)
|+|+|+... ..+.|++|+|.|.. .+|+|...+||+
T Consensus 161 m~y~g~~~~~~~~~~~~gla~s~d~~----g~~~~~~~~~v~ 198 (291)
T cd08994 161 LVYKGGTYNPTKGNRKYGVAIADSPT----GPYTKVSGPPFI 198 (291)
T ss_pred EEEeccccCCCCCcEEEEEEEeCCCC----CCCEECCCCccc
Confidence 999998642 35779999998852 579998766765
No 42
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=98.51 E-value=1.1e-06 Score=93.26 Aligned_cols=121 Identities=16% Similarity=0.198 Sum_probs=84.3
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEe
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYT 209 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YT 209 (704)
..-||. +++.+|.|+|+..-.. + .....-.+|+||+||+..+.++.+. ..++|...+. ..+|+++|+|+
T Consensus 14 ~~~DP~-i~~~~~~yY~~~t~~~----~-~~gi~i~~S~DL~~W~~~g~~~~~~----~~~~WAP~i~-~~~gkyy~yys 82 (280)
T cd09002 14 DYPDPS-ILRDGEDYYMTHSSFK----Y-TPGLVIWHSRDLVNWTPVGPALPEY----EGDVWAPDLC-KYDGRYYIYFP 82 (280)
T ss_pred CCCCCE-EEEECCEEEEEEcchh----c-CCCEEEEECCCcCCceEccccccCC----CCCEEcCeeE-EECCEEEEEEE
Confidence 345995 7888999999754211 1 1246778999999999988777542 3579998875 58999999999
Q ss_pred cccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEee
Q 005279 210 GSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGS 275 (704)
Q Consensus 210 G~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs 275 (704)
.......+.+.+|++.+.. ..|++ |+... .....||.+++ +++|++||+.+.
T Consensus 83 ~~~~~~~~~~~va~ad~p~----Gpw~~----~~~~~-----~~~~IDp~vf~-DddG~~Yl~~~~ 134 (280)
T cd09002 83 AIPEGGNWTNMVIWADSPE----GPWSK----PIDLK-----IGGCIDPGHVV-DEDGNRYLFLSG 134 (280)
T ss_pred eecCCCCceEEEEEECCCC----CCCcC----CEecC-----CCCccCCceEE-cCCCCEEEEECC
Confidence 8764334567888876542 45754 22111 12236999666 678999999863
No 43
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=98.51 E-value=9.8e-07 Score=93.31 Aligned_cols=146 Identities=21% Similarity=0.284 Sum_probs=109.8
Q ss_pred cceEECCEEEEEEee------CCCCCCCCCcEEEEEEeCCCcc-eeecc-ccccc-CCCCCCCcEEeeeEEEecCCcEEE
Q 005279 136 GPVFYKGWYHLFYQY------NPNGAIWGDIVWGHAVSKDLIH-WYHLP-LAMVA-DQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 136 G~~y~~G~YHLFYQ~------nP~~~~wG~~~WGHAvS~DLvh-W~~lp-~AL~P-d~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+++++++++||+|+- .+. +--|.+-|.|+|+++ |+-.+ +.+.| ..+++.-||....++ ..+|+++|
T Consensus 35 av~~~~~~~~~l~Rv~~~yye~~~----~~s~l~ia~s~dgi~~~~~e~ep~~~P~~~~~e~~G~EDPRvt-~I~~~y~m 109 (314)
T COG2152 35 AVVLVGGELLLLYRVVEGYYEDHS----SISHLRIARSDDGIGEFEIEPEPTLWPANYPYEIYGIEDPRVT-KIGGRYYM 109 (314)
T ss_pred eeEEECCEEEEEEEEeccccccCc----cceEEEEEecccCCCceecCCcceEecCCCchhhhcccCceEE-EECCEEEE
Confidence 688899999999987 222 346788899999999 98665 56888 557888999999997 57899999
Q ss_pred EEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe-cCCCeEEEEEeeec-CC--eeE
Q 005279 207 LYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL-TSEGKWRIAIGSRI-NR--TGI 282 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~-~~~g~w~Mv~Gs~~-~~--~G~ 282 (704)
.|||.+.. .+..++|.++|- .+|+|. .+++. | ++||-. +++ ..+|+|.|+---.. +. .+-
T Consensus 110 tYTa~s~~-g~~~~la~t~~f-----~n~~ri--g~i~~-p------dn~~~~-lfP~~~ngk~~~lhr~~~~~~~~~~n 173 (314)
T COG2152 110 TYTAYSDK-GPRLALAVTKDF-----LNWERI--GAIFP-P------DNKDAA-LFPKKINGKYALLHRPVLGEYGMKGN 173 (314)
T ss_pred EEEecCCC-Ccccchhhhhhh-----hhhhhc--ccccC-C------CCCCce-EeeEEecCcEEEEEeecccccCccCc
Confidence 99998654 377899999984 789996 33332 2 345544 222 35789999865332 22 367
Q ss_pred EEEEEeCCCCCcEEecceec
Q 005279 283 TFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 283 ~llY~S~Dl~~W~~~~~l~~ 302 (704)
+.+-.|.|+.+|.....++.
T Consensus 174 iwia~S~dl~~w~~~~~~l~ 193 (314)
T COG2152 174 IWIAFSPDLEHWGIHRKLLG 193 (314)
T ss_pred eEEEEcCCccCCCccceeec
Confidence 88999999999998665554
No 44
>cd08995 GH32_Aec43_like Glycosyl hydrolase family 32. This glycosyl hydrolase family 32 (GH32) includes characterized as well as uncharacterized proteins. GH32 enzymes cleave sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). GH32 family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an a
Probab=98.51 E-value=2e-06 Score=90.51 Aligned_cols=156 Identities=17% Similarity=0.141 Sum_probs=99.2
Q ss_pred CCCCCcccccccccceeecCCCC-----ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeeccc--cc
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNW-----MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPL--AM 180 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~--AL 180 (704)
...+..+..|.+...-+.|+.++ +-.|+ .++.+|+|||||.-+... ..+....++|+|+|+++|+..+. .+
T Consensus 34 ha~S~Dlv~W~~~~~al~~~~~~~d~~g~~sgs-~~~~~g~~~l~YTg~~~~-~~~~~~i~~A~S~D~~~w~k~~~~pv~ 111 (280)
T cd08995 34 LLTTKDLVNYEDHGEAIPRGGDEDDDDAIGTGS-VIKGEGTYHAFYTGHNLD-GKPKQVVMHATSDDLITWTKDPEFILI 111 (280)
T ss_pred EEEccCcCccEECcceecCCCCcccccCceEeE-EEeeCCEEEEEEEEECCC-CCCcEEEEEEECCCCCccEECCCCeec
Confidence 34455677887766666664332 22343 466799999999865322 11346789999999999998752 23
Q ss_pred ccCCCCCCCcEEeeeEEEec-CCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCc
Q 005279 181 VADQWYDIMGVWTGSATILP-DGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDF 255 (704)
Q Consensus 181 ~Pd~~yD~~Gv~SGSavv~~-dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~f 255 (704)
.+...++...+-...++.+. +|+++|+|.+... .....+.++.|.| |.+|+.. .+++.+..+ ..+
T Consensus 112 ~~~~~~~~~~~rDP~Vf~~~~~g~y~m~~g~~~~~~~~~~~g~i~~~~S~D-----l~~W~~~--~~~~~~~~~---~~~ 181 (280)
T cd08995 112 ADGEGYEKNDWRDPFVFWNEEEGCYWMLLATRLLDGPYNRRGCIALFTSKD-----LKNWEYE--EPFYAPGLY---FMP 181 (280)
T ss_pred CCccccccCCccCCcEEEcCCCCeEEEEEEeccCCCCCCCCeEEEEEEeCC-----cCcceec--CceecCCCc---cee
Confidence 32333443444466665543 5999999987542 2234567788887 4899875 455543211 234
Q ss_pred cCCeeEEecCCCeEEEEEeeec
Q 005279 256 RDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 256 RDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
--|.+ + +.+|+|+|+++.+.
T Consensus 182 E~P~l-~-~~~g~~~L~~s~~~ 201 (280)
T cd08995 182 ECPDL-F-KMGDWWYLVYSEFS 201 (280)
T ss_pred ecceE-E-EECCEEEEEEEecc
Confidence 56874 4 46899999998753
No 45
>cd08978 GH_F Glycosyl hydrolase families 43 and 62 form CAZY clan GH-F. This glycosyl hydrolase clan F (according to carbohydrate-active enzymes database (CAZY)) includes family 43 (GH43) and 62 (GH62). GH43 includes enzymes with beta-xylosidase (EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanases (beta-xylanases) and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. GH62 includes enzymes characterized as arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. GH43 are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Ma
Probab=98.45 E-value=4.9e-06 Score=85.96 Aligned_cols=155 Identities=15% Similarity=0.148 Sum_probs=95.7
Q ss_pred CCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 128 KNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 128 ~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
.+-+-+|. +++++|+|||||..+..+ ......+.|+|+|+.+|........+ . ....++..++++.++||+++|+
T Consensus 56 ~~~~waP~-v~~~~g~yyl~y~~~~~~--~~~~~i~~a~s~d~~g~~~~~~~~~~-~-~~~~~~iDp~vf~d~dg~~yl~ 130 (271)
T cd08978 56 SGGLWAPE-VIYYEGKYYLYYSVSDFD--YNGSGIGVATSEDPTGPFEDKVIRPP-T-SNNGNSIDPTVFKDDDGKYYLY 130 (271)
T ss_pred CCceeCCe-EEEECCEEEEEEEcccCC--CCcccEEEEECCCCCCCccccccCcC-c-cCCCCccCcceEEcCCCCEEEE
Confidence 45677886 788999999999987642 23467899999999999765321111 1 1234678899887777999999
Q ss_pred EecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC--CeeEEE
Q 005279 208 YTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN--RTGITF 284 (704)
Q Consensus 208 YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~--~~G~~l 284 (704)
|.+.... ....+.++.+.+. ..|.. ..+++..........+-.|.+ + +.+|+|||++.+... ..-.+.
T Consensus 131 ~~~~~~~~~~~~i~~~~l~~~-----~~~~~--~~~~~~~~~~~~~~~~EgP~~-~-k~~g~yyl~ys~~~~~~~~y~~~ 201 (271)
T cd08978 131 YGSGDPGAGFGGIYISELTDD-----LTKPT--GPPVLSASSGNNNAVTEGPTI-F-KKNGYYYLTYSANGTGDYGYNIG 201 (271)
T ss_pred EecccCCCCCCcEEEEEECcc-----ccccc--CCceeeeeeccCCCceEccEE-E-EECCEEEEEEEeCCCCCCCceEE
Confidence 9876421 1234566666653 22222 233321111111223457984 4 457999999876532 233666
Q ss_pred EEEeCCCC-CcEE
Q 005279 285 VYDTKDFI-NYEL 296 (704)
Q Consensus 285 lY~S~Dl~-~W~~ 296 (704)
+.+|++.. -|+.
T Consensus 202 ~~~s~~~~Gp~~~ 214 (271)
T cd08978 202 YATSDSIDGPYVK 214 (271)
T ss_pred EEECCCCCCCcCc
Confidence 77887763 3444
No 46
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.42 E-value=9.8e-06 Score=86.85 Aligned_cols=108 Identities=24% Similarity=0.365 Sum_probs=72.7
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
-||. +++++|+|+||--.. + ++.+|+||+||+..+.++. ..++|..++. ..+|++++.|+..
T Consensus 4 ~DP~-i~~~~g~YY~~~T~~------~----~i~~S~DL~~W~~~g~~~~------~~~~WAP~i~-~~~g~~Y~~~~~~ 65 (295)
T cd08982 4 ADPV-VILFKGEYYLFASMS------G----GYWHSSDLIDWDFIPTNSL------PDEGYAPAVF-VYDGTLYYTASTY 65 (295)
T ss_pred CCCe-EEEECCEEEEEEeCC------C----CeEECCCcCCceECCcccC------CCCcCcCEEE-EECCEEEEEEeCC
Confidence 5996 678899999885431 1 3689999999999987763 4579999986 4689876666532
Q ss_pred cCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeee
Q 005279 212 TNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 212 ~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~ 276 (704)
.+.+|+++|.- .--|... .+ . ......||.+++ ++||++||+.|+.
T Consensus 66 ------~~~v~~s~~p~---gp~w~~~--~~----~---~~~~~IDp~vf~-DdDGk~Yl~~g~~ 111 (295)
T cd08982 66 ------NSRIYKTADPL---SGPWEEV--DK----S---FPPGLADPALFI-DDDGRLYLYYGCS 111 (295)
T ss_pred ------CceEEEeCCCC---CCCcccc--cc----c---cCCCccCCceEE-CCCCCEEEEEecC
Confidence 13477776642 2235442 01 0 112347999655 6789999999753
No 47
>cd08983 GH43_4 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.39 E-value=2.2e-06 Score=90.82 Aligned_cols=91 Identities=27% Similarity=0.394 Sum_probs=64.9
Q ss_pred CCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----CCeeEEEEEEeCCCCCcEEecceeccCCCCC-ceee
Q 005279 239 PGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----NRTGITFVYDTKDFINYELLRGVLHGVPNTG-MWEC 312 (704)
Q Consensus 239 ~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~g-mWEC 312 (704)
.++|||.+.. +...+|||+|++..++|+|||+..... .....+.+|+|+||++|+..+.++...+..+ +| |
T Consensus 4 ~~~pvl~~~~--g~~~~rDP~I~r~~~~g~yy~~~T~~~~~~~~~~~~~i~i~~S~DLv~W~~~~~~~~~~~~~~~~W-A 80 (276)
T cd08983 4 NGNPVLTSTA--GTKGLRDPFILRSHEGGKYYMIATDLKITGQTNGSQYIVVWESTDLVNWTFQRLVKVNPPNAGNTW-A 80 (276)
T ss_pred CCceEEeCCc--CCCCccCCeEEEcCCCCEEEEEEEecCcCCcccCCCeEEEEECCcccCCcccceeecCCCCcCcEe-C
Confidence 3689998643 357899999877546899999876542 1123578999999999999877653323333 78 9
Q ss_pred eeeEEcCCCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 313 VDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 313 Pdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
|+++..+.. .+|+|.++...
T Consensus 81 Pev~~d~~~-------------g~y~~~~s~~~ 100 (276)
T cd08983 81 PEAFWDAER-------------GQYVVYWSSRL 100 (276)
T ss_pred ccceEcCCC-------------CeEEEEEeccc
Confidence 999988642 27888777643
No 48
>cd08999 GH43_ABN_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.33 E-value=1.6e-05 Score=83.59 Aligned_cols=173 Identities=17% Similarity=0.194 Sum_probs=102.3
Q ss_pred CcccccccccceeecCCCC-----ccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeeccccc-c-cC
Q 005279 112 NNMLSWQRTAFHFQPQKNW-----MNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAM-V-AD 183 (704)
Q Consensus 112 ~~~~~w~Rp~~Hf~P~~gW-----mNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL-~-Pd 183 (704)
..+..|.+...-+.+...| +..|. +++++|+|||||.-+-.+ ..+...|+|+|+|.. .|+..+..+ . +.
T Consensus 38 ~Dl~~W~~~g~~l~~~~~~~~~~~~waP~-v~~~~g~y~~~y~~~~~~--~~~~~i~~a~s~~p~g~~~~~~~~~~~~~~ 114 (287)
T cd08999 38 TDLVNWTYLGDAFPKLPRWWTGGDFWAPD-VSYVNGKYVLYYSARDKG--SGGQCIGVATADSPLGPFTDHGKPPLCCPE 114 (287)
T ss_pred CCCCCcEECCcccCCCCCcccCCCccCce-EEEECCEEEEEEEeecCC--CCCEEEEEEECCCCCCCCccCCcceEecCC
Confidence 3455676554333333332 33453 678899999999876543 235678999999965 898765332 2 22
Q ss_pred CCCCCCcEEeeeEEEecCCcEEEEEecccCC--ceeeEEEE-EeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCee
Q 005279 184 QWYDIMGVWTGSATILPDGKLMMLYTGSTNE--SVQVQNLA-YPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTT 260 (704)
Q Consensus 184 ~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~--~~q~q~lA-~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~V 260 (704)
+..++...+++.++||+++|+|.+.... ..+.+.++ .+.| +.+|+... ..++.+........+--|.+
T Consensus 115 ---~~~~~~Dp~v~~d~dG~~Yl~~~~~~~~~~~~~~i~~~~ls~d-----~~~~~~~~-~~i~~~~~~~~~~~~EgP~i 185 (287)
T cd08999 115 ---GEGGAIDPSFFTDTDGKRYLVWKSDGNSIGKPTPIYLQELSAD-----GLTLTGEP-VRLLRNDEDWEGPLVEAPYL 185 (287)
T ss_pred ---CCCCccCCCeEECCCCCEEEEEeccCCCCCCCceEEEEEeCCC-----CccccCCc-EeeecccccccCCceEeeEE
Confidence 2345677888777799999999764321 11224444 4444 25665421 22333222222233456884
Q ss_pred EEecCCCeEEEEEeeec--CC--eeEEEEEEeCCCC-CcEEec
Q 005279 261 AWLTSEGKWRIAIGSRI--NR--TGITFVYDTKDFI-NYELLR 298 (704)
Q Consensus 261 vw~~~~g~w~Mv~Gs~~--~~--~G~~llY~S~Dl~-~W~~~~ 298 (704)
+ +.+|+|||++.+.. .. .=.+.+++|+|+. .|+..+
T Consensus 186 -~-k~~g~yyl~~S~~~~~~~~~~y~i~~~~s~~~~Gpw~~~~ 226 (287)
T cd08999 186 -V-KRGGYYYLFYSAGGCCSGASTYAVGVARSKSLLGPYVKAP 226 (287)
T ss_pred -E-EECCEEEEEEEcCCccCCCCCEEEEEEEeCCCcCCcCCCC
Confidence 4 45899999997652 11 2256678999876 777643
No 49
>cd08772 GH43_62_32_68 Glycosyl hydrolase families: GH43, GH62, GH32, GH68. Members of the glycosyl hydrolase families 32, 43, 62 and 68 (GH32, GH43, GH62, GH68) all possess 5-bladed beta-propeller domains and comprise clans F and J, as classified by the carbohydrate-active enzymes database (CAZY). Clan F consists of families GH43 and GH62. GH43 includes beta-xylosidases, beta-xylanases, alpha-L-arabinases, and alpha-L-arabinofuranosidases, using aryl-glycosides as substrates, while family GH62 contains alpha-L-arabinofuranosidases (EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose sidechains from xylans. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Clan J consists of families GH32 and GH68. GH32
Probab=98.28 E-value=2e-05 Score=81.77 Aligned_cols=156 Identities=16% Similarity=0.148 Sum_probs=96.8
Q ss_pred CCccCCCcceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc-eeeccc-ccccCC--CCCCCcEEeeeEEEecCCc
Q 005279 129 NWMNDPNGPVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH-WYHLPL-AMVADQ--WYDIMGVWTGSATILPDGK 203 (704)
Q Consensus 129 gWmNDPNG~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh-W~~lp~-AL~Pd~--~yD~~Gv~SGSavv~~dG~ 203 (704)
+-+-.|. +++++ |+|+|||.-... ..+....+.|+|+|+.. |+.... .+.+.. ..+...+..++++.++||+
T Consensus 58 ~~~wap~-v~~~~~g~~~l~yt~~~~--~~~~~~i~~a~s~d~~~~~~~~~~~~~~~~~~~~~~~~~~~Dp~v~~d~dG~ 134 (286)
T cd08772 58 GGIWAPS-IVYIENGKFYLYYTDVSF--TKNQQTIGVATAEDGNGPWTDYIGGPVLPDNPPAADVSNFRDPFVFEDDDGK 134 (286)
T ss_pred CcEecce-EEEcCCCCEEEEEEeecC--CCCceeEEEEEcCCCCCCCccccccccccCCCCccccccccCCeEEEcCCCC
Confidence 3455665 56777 999999987543 23456789999999975 554321 122221 2233467888887776699
Q ss_pred EEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec----CC
Q 005279 204 LMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI----NR 279 (704)
Q Consensus 204 ~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~----~~ 279 (704)
++|+|.+........+.+|.++|. .+|++.+..+++.... ....+--|.++ +.+|+|||++.+.. +.
T Consensus 135 ~y~~~~~~~~~~~~~i~~~~s~d~-----~~w~~~~~~~~~~~~~--~~~~~E~P~~~--~~~g~~yL~~s~~~~~~~~~ 205 (286)
T cd08772 135 WYLVFGSGDHHNFGGIFLYESDDD-----TTWKKGSAELLISEGE--GGKQIEGPGLL--KKNGKYYLFYSINGTGRVDS 205 (286)
T ss_pred EEEEEccccCCCCCeEEEEEcCCC-----CCcccccceeeEeecc--CCCceeccEEE--EECCEEEEEEEcCCCcCCCC
Confidence 999998765433456789999884 7888753222222221 12345679854 45799999998753 12
Q ss_pred eeEEEEEEeCC-CCCcEE
Q 005279 280 TGITFVYDTKD-FINYEL 296 (704)
Q Consensus 280 ~G~~llY~S~D-l~~W~~ 296 (704)
.-.+.+++|++ +-.|+.
T Consensus 206 ~y~~~~~~~~~~~g~~~~ 223 (286)
T cd08772 206 TYSIGYARSESDTGPYVP 223 (286)
T ss_pred CcceEEEEccCCCCCccc
Confidence 23455566654 334443
No 50
>PF04041 DUF377: Domain of unknown function (DUF377); InterPro: IPR007184 Glycosidases or glycosyl hydrolases are a big and widespread family of enzymes that hydrolyse the glycosidic bonds between carbohydrates or between a carbohydrate and an aglycone moiety. On the basis of sequence and structural similarity, the glycoside hydrolase family belongs to the beta-fructosidase (furanosidase) superfamily of glycosyl hydrolases. This leads to the prediction that proteins of this family have a glycosidase (glycoside hydrolase) activity and, most probably, act on a furanoside residue (fructose, arabinose and ribose). Crystal structure from Thermotoga maritima a member of this family, determined to high-resolution by Structural Genomics initiatives, reveals a five-bladed beta-propeller fold with three acidic residues forming the active site.; PDB: 1VKD_A 3TAW_A 3QC2_B 3R67_B.
Probab=98.22 E-value=5.8e-06 Score=89.39 Aligned_cols=108 Identities=17% Similarity=0.257 Sum_probs=81.0
Q ss_pred CCCcEEeeeEEEecCC-cEEEEEecccCCcee-eEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEec
Q 005279 187 DIMGVWTGSATILPDG-KLMMLYTGSTNESVQ-VQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLT 264 (704)
Q Consensus 187 D~~Gv~SGSavv~~dG-~~~~~YTG~~~~~~q-~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~ 264 (704)
....||-..|++..++ +++|+|.+....... .+++|.|.|+ ++|++. .+|||.|...++....-||.|+.
T Consensus 28 ~~~~vfNpgai~~~~~~R~~l~yr~~~~~~~~~~iglA~S~DG-----i~f~~~-~~pil~P~~~~e~~GvEDPRVt~-- 99 (312)
T PF04041_consen 28 EPNAVFNPGAIVFDGGLRVYLLYRAYGSDIGSSRIGLARSDDG-----IHFERD-PEPILYPDTDYEEWGVEDPRVTK-- 99 (312)
T ss_dssp TSSEEEEEEEEEETTE--EEEEEEEEESSSSEEEEEEEEESSS-----SS-EE--SS-SBEE-SSTTHTEEEEEEEEE--
T ss_pred CcceEEcCcEEEECCeeEEEEEEEeECCCCceeEEEEEEccCC-----cCceEC-CCCEEccCCCCcccCccceeEEE--
Confidence 3567999999754444 289999887655444 7999999996 899886 58999876556556778999875
Q ss_pred CCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 265 SEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 265 ~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
.+++|+|++.+.......+.+.+|+|+++|+..+..+.
T Consensus 100 i~d~yymtYta~~~~~~~~~la~s~D~~~~~r~g~~~~ 137 (312)
T PF04041_consen 100 IDDTYYMTYTAYSGKGPRIGLATSKDFKHWERHGKIFP 137 (312)
T ss_dssp ETTEEEEEEEEEESSSEEEEEEEESSSSSEEEEECTTT
T ss_pred ECCEEEEEEEEecCCCcccceEEccchHhhEEeccccC
Confidence 46899999988765556777889999999999886654
No 51
>cd08991 GH43_bXyl_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=98.20 E-value=5.2e-05 Score=80.38 Aligned_cols=170 Identities=13% Similarity=0.144 Sum_probs=95.5
Q ss_pred ccccccccceeecCC-----CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCC
Q 005279 114 MLSWQRTAFHFQPQK-----NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYD 187 (704)
Q Consensus 114 ~~~w~Rp~~Hf~P~~-----gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD 187 (704)
|..|.+...-+.++. +.+-.|. +++.+|+|||||...... -.....++|+|+|.. .|+..+..+.+..
T Consensus 33 l~~W~~~~~~~~~~~~~~~~~~~waP~-v~~~~g~yyl~ys~~~~~--~~~~~i~~a~s~~p~gp~~~~~~~~~~~~--- 106 (294)
T cd08991 33 LVDWKLHGGALLALDDDWGRRGFWAPE-VYYYNGKFYMYYSANDRD--EKTEHIGVAVSDSPLGPFRDIKKPPIDFE--- 106 (294)
T ss_pred CCCceECCccccCCCCCccCCcEEccE-EEEECCEEEEEEEeccCC--CCcceEEEEEeCCCCCCCCcCCCCcccCC---
Confidence 445544443343322 2344675 788999999999876432 235678999999987 6877654333322
Q ss_pred CCcEEeeeEEEecCCcEEEEEecccCCc--eeeEEEEEeCCCCCCccceeEeeCC---CceecC-------CCC----CC
Q 005279 188 IMGVWTGSATILPDGKLMMLYTGSTNES--VQVQNLAYPADPSDPLLIKWVKYPG---NPVLVP-------PPG----IG 251 (704)
Q Consensus 188 ~~Gv~SGSavv~~dG~~~~~YTG~~~~~--~q~q~lA~S~D~~D~~l~~W~K~~~---nPVl~~-------p~g----~~ 251 (704)
.....++++.++||+++|+|+...... ...+..+.+.|. .+|..... .|+..+ +.. .+
T Consensus 107 -~~~iD~~vf~d~dG~~yl~~~~~~~~~~~~~i~~~~l~~d~-----~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 180 (294)
T cd08991 107 -PKSIDAHPFIDDDGKPYLYYSRNNYGNRVSDIYGTELVDDK-----LSIKTELVGPPIPVSAPGIDEIFERWRFGEGKD 180 (294)
T ss_pred -CcccCCceEECCCCCEEEEEEecCCCCcccceEEEEEccce-----eeeccceeecccccccccccccccccccccccc
Confidence 245678888777899999998654321 123344555553 45542111 111111 000 00
Q ss_pred CcCccCCeeEEecCCCeEEEEEeeec-CCee-EEEEEEeCC-CCCcEEe
Q 005279 252 AKDFRDPTTAWLTSEGKWRIAIGSRI-NRTG-ITFVYDTKD-FINYELL 297 (704)
Q Consensus 252 ~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G-~~llY~S~D-l~~W~~~ 297 (704)
..-.--|.+ . +.+|+|||++.+.. .... .+.+.+|++ +-.|+..
T Consensus 181 ~~~~EgP~~-~-k~~g~yyl~ys~~~~~~~~y~~~~a~s~~~~gp~~~~ 227 (294)
T cd08991 181 WRTNEGPTV-L-KHNGRYYLTYSANHYENEDYGVGYATADSPLGPWTKY 227 (294)
T ss_pred CceeeCcEE-E-EECCEEEEEEECCCCCCCCceEEEEEcCCCCCCcEec
Confidence 111234764 3 46799999987542 1111 355567776 4567763
No 52
>cd08990 GH43_AXH_like Glycosyl hydrolase family 43, includes arabinoxylan arabinofuranohydrolase, beta-xylosidase, endo-1,4-beta-xylanase, alpha-L-arabinofuranosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), endo-alpha-L-arabinanase as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of
Probab=98.20 E-value=4.3e-05 Score=80.41 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=90.3
Q ss_pred CCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccc-cccCCCCCCCcEEeeeEEEecCCcEEE
Q 005279 129 NWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLA-MVADQWYDIMGVWTGSATILPDGKLMM 206 (704)
Q Consensus 129 gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~A-L~Pd~~yD~~Gv~SGSavv~~dG~~~~ 206 (704)
+-+--|. +++++|+|||||..... .+....|+|+|+|.. .|+..... +.+ ...+......+++.++.||+++|
T Consensus 62 ~~~wAP~-i~~~~g~yy~yy~~~~~---~~~~~igva~s~~p~Gpw~~~~~~~~~~-~~~~~~~~iDp~vf~d~dG~~yl 136 (274)
T cd08990 62 GQAWAPD-VVEKNGKYYLYFPARDK---DGGFAIGVAVSDSPAGPFKDAGGPILIT-TPSGGWYSIDPAVFIDDDGQAYL 136 (274)
T ss_pred CCcCcCe-EEEECCEEEEEEEeecC---CCceEEEEEEeCCCCCCCCCCCCccccc-cCCCCCCccCCcEEECCCCCEEE
Confidence 4455575 78899999999987643 235678999999976 79987543 222 22233456788887777899999
Q ss_pred EEecccCCceeeEEEEE-eCCCCCCccceeEeeCCCceecCCC---CCCCcCccCCeeEEecCCCeEEEEEeeecCCeeE
Q 005279 207 LYTGSTNESVQVQNLAY-PADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGI 282 (704)
Q Consensus 207 ~YTG~~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~ 282 (704)
+|.+. +.+.++. +.| +.+|+.. ..+|..+. .....-+-=|.+ + +.+|+|||++.+.. ...
T Consensus 137 ~~~~~-----~~~~~~~l~~d-----~~~~~~~--~~~i~~~~~~~~~~~~~~EgP~i-~-k~~G~YYl~yS~~~--~~~ 200 (274)
T cd08990 137 YWGGG-----LGLRVAKLKPD-----MLSLKGE--PVEIVITDGAGDELRRFFEAPWV-H-KRNGTYYLSYSTGD--PEE 200 (274)
T ss_pred EECCc-----CCEEEEEeCcc-----ccccCCC--cEEEEeccccCCCCCCcccceeE-E-EECCEEEEEEECCC--CcE
Confidence 99864 2234443 334 3667542 22332111 001111234774 4 56899999988643 344
Q ss_pred EEEEEeCCCC-CcEEec
Q 005279 283 TFVYDTKDFI-NYELLR 298 (704)
Q Consensus 283 ~llY~S~Dl~-~W~~~~ 298 (704)
+.+.+|+++. -|+..+
T Consensus 201 ~~~a~s~~p~GP~~~~g 217 (274)
T cd08990 201 IAYATSDSPLGPFTYRG 217 (274)
T ss_pred EEEEEcCCCCCCcccCc
Confidence 5555777754 354433
No 53
>cd08996 GH32_B_Fructosidase Glycosyl hydrolase family 32, beta-fructosidases. Glycosyl hydrolase family GH32 cleaves sucrose into fructose and glucose via beta-fructofuranosidase activity, producing invert sugar that is a mixture of dextrorotatory D-glucose and levorotatory D-fructose, thus named invertase (EC 3.2.1.26). This family also contains other fructofuranosidases such as inulinase (EC 3.2.1.7), exo-inulinase (EC 3.2.1.80), levanase (EC 3.2.1.65), and transfructosidases such sucrose:sucrose 1-fructosyltransferase (EC 2.4.1.99), fructan:fructan 1-fructosyltransferase (EC 2.4.1.100), sucrose:fructan 6-fructosyltransferase (EC 2.4.1.10), fructan:fructan 6G-fructosyltransferase (EC 2.4.1.243) and levan fructosyltransferases (EC 2.4.1.-). These retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catal
Probab=98.18 E-value=2e-05 Score=83.73 Aligned_cols=157 Identities=17% Similarity=0.167 Sum_probs=99.5
Q ss_pred CCCCCcccccccccceeecCCCCccCCCc-----ceEEC-CEEEEEEeeCCCCCCCCCcEEEEEEeC-CCcceeecccc-
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYK-GWYHLFYQYNPNGAIWGDIVWGHAVSK-DLIHWYHLPLA- 179 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~-G~YHLFYQ~nP~~~~wG~~~WGHAvS~-DLvhW~~lp~A- 179 (704)
+..+..++.|.+...=+.|...+ |.+| .+..+ |+|+|||.-+......+...-++|+|+ |+++|+..+..
T Consensus 36 ha~S~Dlv~W~~~~~al~p~~~~--d~~g~~sGsav~~~~g~~~~~YTg~~~~~~~~~~~~~lA~S~ddg~~w~k~~~~~ 113 (298)
T cd08996 36 HATSKDLVHWEHLPVALAPDDPY--DSGGCFSGSAVVDDNGKLVLFYTGNVKLDGGRRQTQCLAYSTDDGRTFTKYEGNP 113 (298)
T ss_pred EEEecCccceeECCcccCCCCcc--cCCeEEeCeEEEcCCCcEEEEEeceeCCCCCceEEEEEEEEcCCCCEEEECCCCc
Confidence 44556678887655445553222 3333 24456 999999986543211235677899999 89999987532
Q ss_pred cccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCe
Q 005279 180 MVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPT 259 (704)
Q Consensus 180 L~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~ 259 (704)
+.+....+..+.-...++. .+|+++|+|++...+....+.++.|.|. ++|++. .+++..... ....+--|.
T Consensus 114 ~~~~~~~~~~~~RDP~V~~-~~g~~~m~~g~~~~~~~~~i~ly~S~Dl-----~~W~~~--~~~~~~~~~-~~~~~EcP~ 184 (298)
T cd08996 114 VIPPPDGYTTHFRDPKVFW-HDGKWYMVLGAGTEDGTGRILLYRSDDL-----KNWEYL--GELLTSLGD-FGYMWECPD 184 (298)
T ss_pred eEcCCCCCCCcccCCeEEe-ECCEEEEEEEEEecCCCcEEEEEECCCC-----CCCEEc--ceecccCCC-ccceEeCCc
Confidence 2211222344566777754 5699999999876544456788999884 899985 344321111 123466788
Q ss_pred eEEecCC--CeEEEEEeeec
Q 005279 260 TAWLTSE--GKWRIAIGSRI 277 (704)
Q Consensus 260 Vvw~~~~--g~w~Mv~Gs~~ 277 (704)
+ + +-+ ++|+|+++...
T Consensus 185 l-~-~l~~~~k~vL~~s~~~ 202 (298)
T cd08996 185 L-F-PLDVEGKWVLIFSPQG 202 (298)
T ss_pred E-E-EECCCCeEEEEECCCC
Confidence 4 4 346 99999998763
No 54
>cd08986 GH43_7 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=98.17 E-value=1.5e-05 Score=84.01 Aligned_cols=121 Identities=11% Similarity=0.033 Sum_probs=70.9
Q ss_pred ccCCeeEEecCCCeEEEEEeeecC---------CeeEEEEEEeCCCCCcEEecceeccCC--------------CCCcee
Q 005279 255 FRDPTTAWLTSEGKWRIAIGSRIN---------RTGITFVYDTKDFINYELLRGVLHGVP--------------NTGMWE 311 (704)
Q Consensus 255 fRDP~Vvw~~~~g~w~Mv~Gs~~~---------~~G~~llY~S~Dl~~W~~~~~l~~~~~--------------~~gmWE 311 (704)
||||+|++ ..+|.|||+..+... ..+.+.+|+|+||++|++.+.++...+ ..+..+
T Consensus 2 ~rDP~v~~-~~dg~Yy~~~T~~~~~~~~~~~~~~~~gi~i~~S~DLv~W~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~W 80 (269)
T cd08986 2 IRDTYVTL-GPDGYYYLTGTTPPPGLPFEDCSIVNDGIPLWRSKDLKKWESLGLIWDREKDATWQSYWIDEDDWYKNAVW 80 (269)
T ss_pred CcCCeEEe-cCCCcEEEEEccCCccccccccccCCCceEEEeCccccCccccCcccccCCcccccccccccCCcccCCcC
Confidence 79999665 567889888765421 124577999999999999887764321 122334
Q ss_pred eeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCC--CceEEEEEEeeCCceeeecCCCccccccceeeccCCCccccee
Q 005279 312 CVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDD--RHDYYAIGTYHEKNVTWVPDNPEIDVGIGIRYDYGLFYASKTF 389 (704)
Q Consensus 312 CPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~--~~~~Y~iG~~d~~~~~f~p~~~~~D~g~g~~lD~G~fYA~qtf 389 (704)
||+++.+++ |++|.++.... ......+..=|...+.|+..... + .+. .-.-+..|
T Consensus 81 AP~v~~~~g---------------~yyl~~s~~~~~~~~~~i~va~a~~p~Gp~~~~~~~-~-----~~~--~~iD~~~f 137 (269)
T cd08986 81 APELHYIKG---------------RWYLVACMNNPGYGGSSILLSTSGKIEGPYKHITGN-K-----PLF--PGIDPSLF 137 (269)
T ss_pred CceEEEECC---------------EEEEEEEccCCCCCceEEEEEeCCCCCCCcEeccCC-C-----CCC--CccCCceE
Confidence 999998862 78887776532 11223333323223456532110 0 000 12346778
Q ss_pred ecCCCCcEEEE
Q 005279 390 YDQNKKRRVLW 400 (704)
Q Consensus 390 ~d~~~gRrIl~ 400 (704)
.|. +|+..|+
T Consensus 138 ~D~-DG~~Yl~ 147 (269)
T cd08986 138 EDD-DGKVYLV 147 (269)
T ss_pred EcC-CCCEEEE
Confidence 885 6766654
No 55
>cd08998 GH43_ABN_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-b
Probab=98.03 E-value=0.00018 Score=76.25 Aligned_cols=149 Identities=17% Similarity=0.170 Sum_probs=87.6
Q ss_pred CccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCC--cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 130 WMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDL--IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 130 WmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DL--vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
-+-.|. +++.+|+|||||..+..+. ++...++|+|+|+ -.|+..++.+.++..++...+..+++++++||+++|+
T Consensus 57 ~~wAP~-v~~~~g~yyl~ys~~~~~~--~~~~i~va~s~~~~~gpw~~~~~v~~~~~~~~~~~~iDp~vf~d~dG~~Yl~ 133 (288)
T cd08998 57 NLWAPD-VIYLNGKYYLYYSVSTFGS--NRSAIGLATSDTLPDGPWTDHGIVIESGPGRDDPNAIDPNVFYDEDGKLWLS 133 (288)
T ss_pred CccCCe-EEEECCEEEEEEEEEeCCC--CceEEEEEEeCCCCCCCCEEcceeeecCCCCCCcccccCCEEEcCCCCEEEE
Confidence 344564 6788999999998764331 3456799999998 7999877555554332334567888887779999999
Q ss_pred EecccCCceeeEEEEEe-CCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C---Cee-
Q 005279 208 YTGSTNESVQVQNLAYP-ADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-N---RTG- 281 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S-~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~---~~G- 281 (704)
|..... .+.++.. .|.+.+ ..|... ...++..+.. ..-.-.|++ + +.+|+|||++.+.. . ..+
T Consensus 134 ~~~~~~----~i~~~~l~~~~~~~--~~~~~~-~~~i~~~~~~--~~~~Egp~~-~-k~~g~YYl~~S~~~~~~~~~~~y 202 (288)
T cd08998 134 FGSFWG----GIFLVELDPKTGKP--LYPGGY-GYNIAGRPRG--HGAIEAPYI-I-YRGGYYYLFVSYGGCCAGEDSTY 202 (288)
T ss_pred eeeccC----CEEEEEeCcccCCc--cCCCCc-ceEEeccCCC--CCceeeeEE-E-EeCCEEEEEEEcchhcCCCCCce
Confidence 975321 1233332 222221 222110 0112222211 112347884 4 46899999886432 1 112
Q ss_pred EEEEEEeCCCC
Q 005279 282 ITFVYDTKDFI 292 (704)
Q Consensus 282 ~~llY~S~Dl~ 292 (704)
++.+++|+++.
T Consensus 203 ~v~~~~s~~~~ 213 (288)
T cd08998 203 NIRVGRSKSIT 213 (288)
T ss_pred EEEEEEcCCCC
Confidence 56788888753
No 56
>PF04616 Glyco_hydro_43: Glycosyl hydrolases family 43; InterPro: IPR006710 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 43 GH43 from CAZY includes enzymes with the following activities, beta-xylosidase (3.2.1.37 from EC), alpha-L-arabinofuranosidase (3.2.1.55 from EC); arabinanase (3.2.1.99 from EC), and xylanase (3.2.1.8 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3KST_B 1UV4_A 1YRZ_A 1YIF_B 3NQH_A 3QED_D 3QEE_A 3QEF_B 1YI7_A 1Y7B_B ....
Probab=97.98 E-value=0.00015 Score=75.95 Aligned_cols=171 Identities=14% Similarity=0.154 Sum_probs=101.2
Q ss_pred CcccccccccceeecCCCCccCCCc------ceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCC
Q 005279 112 NNMLSWQRTAFHFQPQKNWMNDPNG------PVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQ 184 (704)
Q Consensus 112 ~~~~~w~Rp~~Hf~P~~gWmNDPNG------~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~ 184 (704)
..|..|......+.+...+....++ +++.+|+|||||...... .....+.|+|++.. .|+.......+
T Consensus 41 ~DL~~W~~~g~~~~~~~~~~~~~~~~~WAP~i~~~~g~yy~y~~~~~~~---~~~~~~va~a~~~~Gp~~~~~~~~~~-- 115 (286)
T PF04616_consen 41 KDLVNWTDAGNVLPPPPDWDWANNGNIWAPEIHYINGKYYMYYSDSGGD---AGSGIGVATADSPDGPWTDPGKIPIP-- 115 (286)
T ss_dssp SSSSSEEEEEECESSTTTTSTTTSETTEEEEEEEETTEEEEEEEEESTS---TTEEEEEEEESSTTS-EEEEEEEEEE--
T ss_pred CCCcccccceeeecccccccccccccccCCeEEEcCCeEEEEEEccCCC---CCcceeEEEeCCcccccccccceeec--
Confidence 4466787777677665444422222 677899999999922111 23558899999986 89987654433
Q ss_pred CCCCCcEEeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEe
Q 005279 185 WYDIMGVWTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWL 263 (704)
Q Consensus 185 ~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~ 263 (704)
...+..+++++++||+.+|+|.+.... ..+.+.+|...+.. .++.......+..........-.--|++ +
T Consensus 116 ---~~~~iD~~vf~d~dG~~Yl~~~~~~~~~~~~~i~~~~l~~d~----~~~~~~~~~~~~~~~~~~~~~~~Egp~~-~- 186 (286)
T PF04616_consen 116 ---GGNSIDPSVFVDDDGKYYLYYGSWDNGDPGGGIYIAELDPDG----TSLTGEPVVVIFPGDEGWDGGVVEGPFV-F- 186 (286)
T ss_dssp ---SSSSSSEEEEEETTSEEEEEEEESTTTSSEEEEEEEEEETTT----SSEEEEECEEEEEESGSSTTTBEEEEEE-E-
T ss_pred ---cccccCceEEEecCCCcEEeCcccCCCccceeEEeecccCcc----ccccCcccccccccccccCCccccceEE-E-
Confidence 234567888888889999999986543 23445555544321 3444322122222111111122234774 4
Q ss_pred cCCCeEEEEEeeec-CCeeEEEEEEeCCCCC-cEE
Q 005279 264 TSEGKWRIAIGSRI-NRTGITFVYDTKDFIN-YEL 296 (704)
Q Consensus 264 ~~~g~w~Mv~Gs~~-~~~G~~llY~S~Dl~~-W~~ 296 (704)
+.+|+|||++.... ...-.+.+++|+|+.. |+.
T Consensus 187 k~~g~yYl~~s~~~~~~~y~v~~~~s~~~~gp~~~ 221 (286)
T PF04616_consen 187 KHGGKYYLFYSAGGTGSPYQVGYARSDSPLGPWEW 221 (286)
T ss_dssp EETTEEEEEEEESGSSTTTEEEEEEESSTTSGGEE
T ss_pred EcCCCEEEEEeccCCCCCceEEEeeccCCCCceee
Confidence 46899999988653 2223566789999765 443
No 57
>TIGR01322 scrB_fam sucrose-6-phosphate hydrolase.
Probab=97.82 E-value=0.00022 Score=80.70 Aligned_cols=157 Identities=14% Similarity=0.168 Sum_probs=93.6
Q ss_pred CCCCCcccccccccceeecCCCCc----cCCCcceEECCEEEEEEeeCCCCCCCC-CcEEEEEEeCCCcceeecc-cccc
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWM----NDPNGPVFYKGWYHLFYQYNPNGAIWG-DIVWGHAVSKDLIHWYHLP-LAMV 181 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWm----NDPNG~~y~~G~YHLFYQ~nP~~~~wG-~~~WGHAvS~DLvhW~~lp-~AL~ 181 (704)
+.-+..+++|.+-..=+.|..-|- -.++ .+..+|++||||..+.....+. ...-++|+|+|+.+|+..+ +.|.
T Consensus 59 ha~S~Dlv~W~~~~~al~P~~~~d~~G~~sGs-av~~~g~~~l~YTg~~~~~~~~~~~~q~lA~S~Dg~~~~k~~~pvi~ 137 (445)
T TIGR01322 59 HYTSKDLVHWEDEGVALAPDDPYDSHGCYSGS-AVDNNGQLTLMYTGNVRDSDWNRESYQCLATMDDDGHFEKFGIVVIE 137 (445)
T ss_pred EEECCCccccEECCccCcCCCcccCCceEECe-EEeeCCEEEEEEeccccCCCCCeeEEEEEEEcCCCCeEEECCCceEe
Confidence 334556788876444455543221 1333 3457999999999764322232 2334689999999999876 3454
Q ss_pred cCC-CCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCC---CCCCcCccC
Q 005279 182 ADQ-WYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPP---GIGAKDFRD 257 (704)
Q Consensus 182 Pd~-~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~---g~~~~~fRD 257 (704)
+.. .+. .+.-...+. ..+|+++|+|.+..........+..|+| |++|+.. .++..++. +.....+--
T Consensus 138 ~~~~~~~-~~fRDP~V~-~~~g~~~M~~g~~~~~~~g~i~ly~S~D-----l~~W~~~--g~~~~~~~~~~~~~g~~~EC 208 (445)
T TIGR01322 138 LPPAGYT-AHFRDPKVW-KHNGHWYMVIGAQTETEKGSILLYRSKD-----LKNWTFV--GEILGDGQNGLDDRGYMWEC 208 (445)
T ss_pred CCCCCCc-CcCCCCcEE-eECCEEEEEEEEecCCCceEEEEEECCC-----cccCeEe--cccccccccccCCccceEEC
Confidence 432 221 223345553 4689999999876543223446777777 5899986 45544321 111123567
Q ss_pred CeeEEecCCCeEEEEEeee
Q 005279 258 PTTAWLTSEGKWRIAIGSR 276 (704)
Q Consensus 258 P~Vvw~~~~g~w~Mv~Gs~ 276 (704)
|- ++ +-+++|+|+++..
T Consensus 209 Pd-lf-~l~~k~vL~~s~~ 225 (445)
T TIGR01322 209 PD-LF-SLDGQDVLLFSPQ 225 (445)
T ss_pred Ce-EE-EECCcEEEEEecc
Confidence 87 44 4578999998754
No 58
>cd09002 GH43_XYL_3 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended subs
Probab=97.81 E-value=0.0002 Score=76.19 Aligned_cols=79 Identities=16% Similarity=0.289 Sum_probs=56.4
Q ss_pred CCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 240 GNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 240 ~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
.||||. .++.||.|++ .+++|||+.++.. ..+.+.+|+|+||.+|+..+..+... ..++| +|+++..+
T Consensus 7 ~nPv~~-------~~~~DP~i~~--~~~~yY~~~t~~~-~~~gi~i~~S~DL~~W~~~g~~~~~~-~~~~W-AP~i~~~~ 74 (280)
T cd09002 7 RNPILA-------GDYPDPSILR--DGEDYYMTHSSFK-YTPGLVIWHSRDLVNWTPVGPALPEY-EGDVW-APDLCKYD 74 (280)
T ss_pred eCCccC-------CCCCCCEEEE--ECCEEEEEEcchh-cCCCEEEEECCCcCCceEccccccCC-CCCEE-cCeeEEEC
Confidence 489985 3468999765 4789999765422 22347799999999999988766432 23589 79998875
Q ss_pred CCCCCCcccccCCCCcEEEEEEeeCC
Q 005279 320 TTGEHGLDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 320 ~~~~~gl~~~~~g~~~k~VL~~s~~~ 345 (704)
+ |++|.++...
T Consensus 75 g---------------kyy~yys~~~ 85 (280)
T cd09002 75 G---------------RYYIYFPAIP 85 (280)
T ss_pred C---------------EEEEEEEeec
Confidence 2 7888777643
No 59
>cd08989 GH43_XYL Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended
Probab=97.71 E-value=0.00015 Score=76.59 Aligned_cols=78 Identities=19% Similarity=0.268 Sum_probs=56.0
Q ss_pred CceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceeccC---------CCCCcee
Q 005279 241 NPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHGV---------PNTGMWE 311 (704)
Q Consensus 241 nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~~---------~~~gmWE 311 (704)
||||. .++.||.++. .++.|||+.++.....| +.+|+|+||.+|+..+..+... ...++|
T Consensus 1 NPvi~-------~~~~DP~ii~--~~~~yY~~~t~~~~~~g-~~~~~S~DL~~W~~~g~~~~~~~~~~~~~~~~~~~~W- 69 (269)
T cd08989 1 NPILK-------GDNPDPSIIR--AGDDYYMASSTFEWFPG-VQIHHSTDLVNWHLIGHPLDRLEDLDMKGNPYSGGIW- 69 (269)
T ss_pred CCcCC-------CCCCCCcEEE--ECCeEEEEECccccCCC-cEEEECCccCCCEEccccccCccccccccCCCCCcEE-
Confidence 67774 3578999764 57899999765432223 6789999999999988765431 122488
Q ss_pred eeeeEEcCCCCCCCcccccCCCCcEEEEEEeeC
Q 005279 312 CVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMD 344 (704)
Q Consensus 312 CPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~ 344 (704)
||+++..++ ||+|.++..
T Consensus 70 AP~v~~~~G---------------~yy~yy~~~ 87 (269)
T cd08989 70 APCLSYYDG---------------KFWLIYTAV 87 (269)
T ss_pred cceEEEECC---------------EEEEEEecc
Confidence 999998852 788877765
No 60
>cd08981 GH43_2 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.71 E-value=0.00046 Score=73.83 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=55.0
Q ss_pred cCccCCeeEEecCCCeEEEEEeeecCC----eeEEEEEEeCCCCCcEEecceeccCC---CCCceeeeeeEEcCCCCCCC
Q 005279 253 KDFRDPTTAWLTSEGKWRIAIGSRINR----TGITFVYDTKDFINYELLRGVLHGVP---NTGMWECVDFYPVSTTGEHG 325 (704)
Q Consensus 253 ~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~----~G~~llY~S~Dl~~W~~~~~l~~~~~---~~gmWECPdlf~l~~~~~~g 325 (704)
..+|||+|++.+.+|+|||+..+.... ...+-+|+|+||++|+..+.++...+ ......+|++...++
T Consensus 4 ~~~~DP~v~~~~~~g~yYl~~T~~~~~~~~~~~gi~v~~S~DLv~W~~~g~~~~~~~~~~~~~~~WAP~v~~~~G----- 78 (291)
T cd08981 4 IRIRDPFILADPETGTYYLYGTTDPNIWGGEGTGFDVYKSKDLKDWEGPYPVFRPPDDFWADDNFWAPEVHEYKG----- 78 (291)
T ss_pred ccccCCEEEEECCCCEEEEEEecCccccccCCCcEEEEECCChhcccccceeeccCCCcCccccccCCeeeeeCC-----
Confidence 358999988766689999998764211 12367999999999999888775322 123456799887642
Q ss_pred cccccCCCCcEEEEEEeeCC
Q 005279 326 LDTSHNGPGVKHVVKASMDD 345 (704)
Q Consensus 326 l~~~~~g~~~k~VL~~s~~~ 345 (704)
||+|..+...
T Consensus 79 ----------~yyly~s~~~ 88 (291)
T cd08981 79 ----------RYYMFATFHN 88 (291)
T ss_pred ----------EEEEEEEecc
Confidence 7888776543
No 61
>smart00640 Glyco_32 Glycosyl hydrolases family 32.
Probab=97.67 E-value=0.00035 Score=78.92 Aligned_cols=159 Identities=16% Similarity=0.190 Sum_probs=94.1
Q ss_pred CCCCCCcccccccccceeecCCCCccCCCc-----ceEECCEEEEEEeeCC-CCC--CCCCcE-EEEEEeCCCcceeecc
Q 005279 107 SYPWTNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYKGWYHLFYQYNP-NGA--IWGDIV-WGHAVSKDLIHWYHLP 177 (704)
Q Consensus 107 ~~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP-~~~--~wG~~~-WGHAvS~DLvhW~~lp 177 (704)
.+..+..+++|.+..-=+.|... .|.+| .+..+|.||+||.-+- ... ..++.. -.+|+|+|++||+..+
T Consensus 41 gha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~sGsav~~~~~~~~~YTg~~~~~~~~~~~~~~~~~~ass~d~~~w~k~~ 118 (437)
T smart00640 41 GHAVSKDLVHWTHLPVALAPDEW--YDSNGVFSGSAVIDPGNLSLLYTGNVAIDTNVQVQRQAQQLAASDDLGGTWTKYP 118 (437)
T ss_pred EEEEcCCcceeeecCcccCCCCc--CCCCcEEEEEEEECCCceEEEEcCCcccccccCcccEEEEEEEECCCCCeeEECC
Confidence 34556678888754444666542 24455 3445788999998652 111 122332 3678899999999873
Q ss_pred --cccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCc
Q 005279 178 --LAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDF 255 (704)
Q Consensus 178 --~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~f 255 (704)
+.|.+...+.....=...++..++|+++|++.+...+..-.+.++.|+| |++|+.. .+++.++.+.....|
T Consensus 119 ~~Pvi~~~p~~~~~~fRDP~Vf~~~~~~~~m~~g~~~~~~~G~i~ly~S~D-----l~~W~~~--~~~~~~~~~~~g~~w 191 (437)
T smart00640 119 GNPVLVPPPGIGTEHFRDPKVFWYDGDKWYMVIGASDEDKTGIALLYRSTD-----LKNWTLL--GELLHSGVGDTGGMW 191 (437)
T ss_pred CCcEEeCCCCCCCCCcCCCCccEECCCEEEEEEEEEecCCCeEEEEEECCC-----cccCeEC--CcccccCCCCccceE
Confidence 4455433222222334455444446999999876544445577888887 4899875 455443212111346
Q ss_pred cCCeeEEecCCC-----eEEEEEeee
Q 005279 256 RDPTTAWLTSEG-----KWRIAIGSR 276 (704)
Q Consensus 256 RDP~Vvw~~~~g-----~w~Mv~Gs~ 276 (704)
-.|- ++ +-++ +|+|+++..
T Consensus 192 ECPd-lf-~l~~~~~~~~~vLi~s~~ 215 (437)
T smart00640 192 ECPD-LF-PLPGDGDTSKHVLKVSPQ 215 (437)
T ss_pred ECCc-EE-EeCCCCCceeEEEEECcC
Confidence 6787 33 2344 899998775
No 62
>cd08997 GH68 Glycosyl hydrolase family 68, includes levansucrase, beta-fructofuranosidase and inulosucrase. Glycosyl hydrolase family 68 (GH68) consists of frucosyltransferases (FTFs) that include levansucrase (EC 2.4.1.10), beta-fructofuranosidase (EC 3.2.1.26) and inulosucrase (EC 2.4.1.9), all of which use sucrose as their preferential donor substrate. Levansucrase, also known as beta-D-fructofuranosyl transferase, catalyzes the transfer of the sucrose fructosyl moiety to a growing levan chain. Similarly, inulosucrase catalyzes long inulin-type of fructans, and beta-fructofuranosidases create fructooligosaccharides (FOS). However, in the absence of high fructan/sucrose ratio, some GH68 enzymes can also use fructan as donor substrate. GH68 retaining enzymes (i.e. they retain the configuration at anomeric carbon atom of the substrate) catalyze hydrolysis in two steps involving a covalent glycosyl enzyme intermediate: an aspartate located close to the N-terminus acts as the catalytic n
Probab=97.57 E-value=0.0019 Score=70.98 Aligned_cols=174 Identities=15% Similarity=0.137 Sum_probs=101.5
Q ss_pred CCCCCcccccccccceeecCCCCcc-----CCCcceEECCEEEEEEeeCCCCC---CCCCcEEEEEEeCCCccee----e
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMN-----DPNGPVFYKGWYHLFYQYNPNGA---IWGDIVWGHAVSKDLIHWY----H 175 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmN-----DPNG~~y~~G~YHLFYQ~nP~~~---~wG~~~WGHAvS~DLvhW~----~ 175 (704)
+-.+..+..|.+ .-++.|+ +|.- -+...+..+|+|||||--+-... .--.+..++|+++|+..|. .
T Consensus 45 h~~S~dlv~W~~-~~~l~p~-~~~d~~g~wSGsa~~~~dg~~~lfYTg~~~~~~~~~~~~Q~ia~a~~~~~~v~~~~~~~ 122 (349)
T cd08997 45 YFYSRAGGNWID-GGKVFPD-GLSPGSREWSGSATLDDDGTVQLFYTAVGRKGEPQPTFTQRLALARGTLSVVNLSGFED 122 (349)
T ss_pred EEEeCCCCcccC-CCccCCC-CcccCCCeEcceEEEeCCCeEEEEEeccccCCCCCCCceEEEEEEECCCcceEecccCc
Confidence 445556667766 4455554 3321 12222223599999999763211 1124678999999985554 3
Q ss_pred cccccccCC-CCCCC-------------cEEeeeEEEec-CCcEEEEEecccCCc-------------------------
Q 005279 176 LPLAMVADQ-WYDIM-------------GVWTGSATILP-DGKLMMLYTGSTNES------------------------- 215 (704)
Q Consensus 176 lp~AL~Pd~-~yD~~-------------Gv~SGSavv~~-dG~~~~~YTG~~~~~------------------------- 215 (704)
....+.++. .|+.. ..=...++.++ +|+.+|++++++...
T Consensus 123 ~~~lf~~Dg~~Yqt~~q~~~~~~~~~~~~fRDP~vf~d~~~G~~ymvfeant~~~~g~~~~~~~~~~~~~~~~~~~~~a~ 202 (349)
T cd08997 123 HHELFEPDGDLYQTDQQYEGTGAQGDIKAFRDPFVFEDPETGKTYLLFEGNTAGERGSQECTEAELGRVLPDTVKPDGAS 202 (349)
T ss_pred cceeeeCCCceEEeccccccccccCccCcccCCEEEecCCCCcEEEEEEeccCCCCCccccccccccccccccccccccc
Confidence 334455554 33211 11234454444 599999999987421
Q ss_pred --eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecC-------CeeEEEEE
Q 005279 216 --VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRIN-------RTGITFVY 286 (704)
Q Consensus 216 --~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~-------~~G~~llY 286 (704)
.-+++||.+++. .|.+|+-+ .|++.+. +. ...+-+|.+ + +.+|+|||+..++.. ....+..|
T Consensus 203 ~~~G~IGia~~~s~---dl~~W~~~--~PL~~a~-~v-~d~~E~P~v-~-~~~gk~yL~~s~~~~~~~~~~~~~~~~~g~ 273 (349)
T cd08997 203 YQNGNVGIAVAKND---DLTEWKLL--PPLLEAN-GV-NDELERPHV-V-FHNGKYYLFTISHRSTFAPGLSGPDGLYGF 273 (349)
T ss_pred cccceEEEEEecCC---CCCCcEEc--CccccCC-Cc-CCceEcceE-E-EECCEEEEEEeCCcCccccccCCCCcEEEE
Confidence 134667876642 25789876 6787643 22 234678995 4 469999999775531 11235566
Q ss_pred EeCCCC
Q 005279 287 DTKDFI 292 (704)
Q Consensus 287 ~S~Dl~ 292 (704)
.|+++.
T Consensus 274 vsdsl~ 279 (349)
T cd08997 274 VSDSLR 279 (349)
T ss_pred EeCCCC
Confidence 777764
No 63
>cd09004 GH43_bXyl Glycosyl hydrolase family 43, includes mostly 1,4-beta-xylanases. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with xylan-digesting beta-xylosidase (EC 3.2.1.37) and xylanase (endo-alpha-L-arabinanase) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.51 E-value=0.0059 Score=64.27 Aligned_cols=138 Identities=15% Similarity=0.130 Sum_probs=80.5
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceee-cccccccCCCCCCCcEEeeeEEEecCCcEEEEEec
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYH-LPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 210 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~-lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 210 (704)
-|. +++++|+|||||.-+ ...|+|+|+|.. .|+. .+..+..... .......++++.+.||+.+|+|.+
T Consensus 68 AP~-v~~~~g~yy~yys~~--------~~i~va~s~~p~gp~~~~~~~p~~~~~~-~~~~~iDp~vf~d~dG~~yl~~~~ 137 (275)
T cd09004 68 APS-VIERNGKYYFYFSAN--------GGIGVAVADSPLGPFKDALGKPLIDKFT-FGAQPIDPDVFIDDDGQAYLYWGG 137 (275)
T ss_pred CCe-EEEECCEEEEEEEcC--------CcEEEEEeCCCCCCCCCCCCCccccCCc-CCCCccCCCeEECCCCCEEEEEcC
Confidence 454 788899999999854 357999999976 6876 3322222211 223456778877789999999965
Q ss_pred ccCCceeeEEEE-EeCCCCCCccceeEeeCCCcee-cCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-C-CeeEEEEE
Q 005279 211 STNESVQVQNLA-YPADPSDPLLIKWVKYPGNPVL-VPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-N-RTGITFVY 286 (704)
Q Consensus 211 ~~~~~~q~q~lA-~S~D~~D~~l~~W~K~~~nPVl-~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~-~~G~~llY 286 (704)
.. ...++ .+.| +.+|+.. ..++ ..+.+ -+--|.+ + +.+|+|||++.+.. . ..-.+.+.
T Consensus 138 ~~-----~~~i~~l~~d-----~~~~~~~--~~~~~~~~~~----~~EgP~i-~-k~~G~yyl~ys~~~~~~~~Y~~~ya 199 (275)
T cd09004 138 WG-----HCNVAKLNED-----MISFDGE--RDGSEITPKN----YFEGPFM-F-KRNGIYYLMWSEGGWTDPDYHVAYA 199 (275)
T ss_pred cC-----CEEEEEECCC-----cccccCc--ceeeeccCCC----ceecceE-E-EECCEEEEEEECCCCCCCCceEEEE
Confidence 31 12222 3344 2556432 1121 11111 2345884 4 46899999887653 1 12255556
Q ss_pred EeCCCC-CcEEec
Q 005279 287 DTKDFI-NYELLR 298 (704)
Q Consensus 287 ~S~Dl~-~W~~~~ 298 (704)
+|++.. -|+..+
T Consensus 200 ~s~~~~GP~~~~~ 212 (275)
T cd09004 200 MADSPLGPFERPG 212 (275)
T ss_pred EcCCCCCCcccCC
Confidence 777753 365543
No 64
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=97.44 E-value=0.014 Score=60.87 Aligned_cols=181 Identities=17% Similarity=0.255 Sum_probs=102.8
Q ss_pred cccccceeecC--CCCccCCCcceE-ECCEEEEEEeeCCCCCCCCCcEEEEEEeCC-CcceeecccccccCCCCCCCcEE
Q 005279 117 WQRTAFHFQPQ--KNWMNDPNGPVF-YKGWYHLFYQYNPNGAIWGDIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVW 192 (704)
Q Consensus 117 w~Rp~~Hf~P~--~gWmNDPNG~~y-~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~ 192 (704)
|-.|+.=+.++ ..=..||. +++ .+|+.||||........|......+.+|+| ..+|.... .|.+.......+..
T Consensus 32 Ws~~~~v~~~~~~~~~~~~p~-~~~~~~g~l~l~~~~~~~~~~~~~~~~~~~~S~D~G~TWs~~~-~l~~~~~~~~~~~~ 109 (275)
T PF13088_consen 32 WSEPRIVADGPKPGRRYGNPS-LVVDPDGRLWLFYSAGSSGGGWSGSRIYYSRSTDGGKTWSEPT-DLPPGWFGNFSGPG 109 (275)
T ss_dssp EEEEEEEETSTBTTCEEEEEE-EEEETTSEEEEEEEEEETTESCCTCEEEEEEESSTTSS-EEEE-EEHHHCCCSCEECS
T ss_pred eCCCEEEeeccccCCcccCcE-EEEeCCCCEEEEEEEccCCCCCCceeEEEEEECCCCCCCCCcc-ccccccccceeccc
Confidence 44444434444 22334675 444 499999999766665555555555599999 89999754 33333222233445
Q ss_pred eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 193 TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 193 SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
.+..+...+|++++-+.... .......+.+|.|++ .+|+... ++.. ....--|.++ ...+|+.+|+
T Consensus 110 ~~~~i~~~~G~l~~~~~~~~-~~~~~~~~~~S~D~G----~tW~~~~--~~~~------~~~~~e~~~~-~~~dG~l~~~ 175 (275)
T PF13088_consen 110 RGPPIQLPDGRLIAPYYHES-GGSFSAFVYYSDDGG----KTWSSGS--PIPD------GQGECEPSIV-ELPDGRLLAV 175 (275)
T ss_dssp EEEEEEECTTEEEEEEEEES-SCEEEEEEEEESSTT----SSEEEEE--ECEC------SEEEEEEEEE-EETTSEEEEE
T ss_pred eeeeeEecCCCEEEEEeecc-ccCcceEEEEeCCCC----ceeeccc--cccc------cCCcceeEEE-ECCCCcEEEE
Confidence 55556667998777533222 223567788999986 9998852 2210 1122345533 3578888888
Q ss_pred EeeecCCeeEEEEEEeCC-CCCcEEecceeccCCCCCceeeeeeEEcC
Q 005279 273 IGSRINRTGITFVYDTKD-FINYELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 273 ~Gs~~~~~G~~llY~S~D-l~~W~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
+... .. +.+.+++|.| ..+|+.....-. +.. =.++.++++.
T Consensus 176 ~R~~-~~-~~~~~~~S~D~G~TWs~~~~~~~--~~~--~~~~~~~~~~ 217 (275)
T PF13088_consen 176 FRTE-GN-DDIYISRSTDGGRTWSPPQPTNL--PNP--NSSISLVRLS 217 (275)
T ss_dssp EEEC-SS-TEEEEEEESSTTSS-EEEEEEEC--SSC--CEEEEEEECT
T ss_pred EEcc-CC-CcEEEEEECCCCCcCCCceeccc--Ccc--cCCceEEEcC
Confidence 7654 21 2566677766 899997443222 211 1445556654
No 65
>cd08988 GH43_ABN Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes with alpha-L-arabinofuranosidase (AFN; EC 3.2.1.55) and endo-alpha-L-arabinanase (ABN; EC 3.2.1.99) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. The GH43 ABN enzymes hydrolyze alpha-1,5-L-arabinofuranoside linkages while the ABF enzymes cleave arabinose side chains so that the combined actions of these two enzymes reduce arabinan to L-arabinose and/or arabinooligosaccharides. These arabinan-degrading enzymes are important in the food industry for efficient production of L-arabinose from agricultural waste; L-arabinose is often used as a bioactive sweetener. A common structural feature of GH43 enzymes is a 5-bla
Probab=97.32 E-value=0.0081 Score=63.73 Aligned_cols=143 Identities=15% Similarity=0.160 Sum_probs=79.0
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc------ceeecccccccCCCCCCCcEEeeeEEEecCCcEE
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI------HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLM 205 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv------hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~ 205 (704)
.-|. +.|++|+|||||.-...+. .....|.|+|++.. .|+.....+.++.. +......+++++++||+.+
T Consensus 58 WAP~-v~~~~G~yylyys~~~~~~--~~~~igva~s~~p~Gp~~~~~w~~~~~i~~~~~~-~~~~~iDp~~f~DdDG~~Y 133 (279)
T cd08988 58 WAPD-IYQHNGKFYLYYSVSAFGS--NTSAIGLAVNKTIDGPSPDYGWEKGGVVISSDAS-DNYNAIDPAIIFDQHGQPW 133 (279)
T ss_pred ecce-EEEECCEEEEEEEeccCCC--CCceEEEEEcCCCCCCCcCcCccccCceEecCCC-CCCCccCCceEEcCCCCEE
Confidence 3443 6788999999998765432 23578999999864 25543333333322 1234578888888899999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCccceeEeeCCC--ceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-----C
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGN--PVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-----N 278 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~n--PVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-----~ 278 (704)
|+|-... ... +..-.+.|.. ... ..+. .++..+.. ..-.-=|+ ++ +.+|+|||+..... +
T Consensus 134 l~~g~~~-~gi--~~~eL~~d~~-----~~~-~~~~~~~i~~~~~~--~~~~Egp~-i~-k~~g~YYl~~S~g~~~~~~~ 200 (279)
T cd08988 134 LSFGSFW-GGI--KLFELDKDTM-----KPA-EPGELHSIAGRERS--SAAIEAPF-IL-YRGDYYYLFVSFGLCCRGGD 200 (279)
T ss_pred EEecccC-CCE--EEEEECcccC-----Ccc-CCCcceEEeccCCC--CCceEeeE-EE-EcCCeEEEEEEcCcccCCCC
Confidence 9995421 111 1222333321 110 0111 12221110 11223577 45 46899999876532 1
Q ss_pred CeeEEEEEEeCCC
Q 005279 279 RTGITFVYDTKDF 291 (704)
Q Consensus 279 ~~G~~llY~S~Dl 291 (704)
..-.+.+++|+++
T Consensus 201 ~~y~v~~arS~~~ 213 (279)
T cd08988 201 STYKIAVGRSKNI 213 (279)
T ss_pred CCeEEEEEEeCCC
Confidence 2235777888875
No 66
>cd08985 GH43_6 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=97.29 E-value=0.0083 Score=63.32 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=83.4
Q ss_pred ceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccC
Q 005279 137 PVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTN 213 (704)
Q Consensus 137 ~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~ 213 (704)
++|. +|+|||||..+..+ .+....|+|+|++.. -|+.++..+ |. ..+...+++.+++||+.+|+|....+
T Consensus 70 v~y~~~~g~Y~m~~~~~~~~--~~~~~igvA~Sd~p~Gpf~~~~~~~-~~----~~~~~Dp~vf~DdDG~~Yl~~~~~~~ 142 (265)
T cd08985 70 VIYNAKTGKYVMWMHIDSSD--YSDARVGVATSDTPTGPYTYLGSFR-PL----GYQSRDFGLFVDDDGTAYLLYSDRDN 142 (265)
T ss_pred EEEeCCCCEEEEEEEeCCCC--CcceeEEEEEeCCCCCCCEECCccC-CC----CCCccCCceEEcCCCCEEEEEecCCC
Confidence 4554 59999999987522 346789999999865 477665333 21 23456788888889999999986432
Q ss_pred CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC-eeEEEEEEeCCCC
Q 005279 214 ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR-TGITFVYDTKDFI 292 (704)
Q Consensus 214 ~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~-~G~~llY~S~Dl~ 292 (704)
+...++.-.+. +.++ .+.+..... ...+-.|. ++ +.+|.|||+....... ...+..++|+++.
T Consensus 143 ---~~i~i~~L~~d----~~~~---~~~~~~~~~----~~~~EaP~-i~-K~~g~YYL~~S~~t~~~~~~~~y~~s~s~~ 206 (265)
T cd08985 143 ---SDLYIYRLTDD----YLSV---TGEVTTVFV----GAGREAPA-IF-KRNGKYYLLTSGLTGWNPNDARYATATSIL 206 (265)
T ss_pred ---CceEEEEeCCC----cccc---cceEEEccC----CCccccce-EE-EECCEEEEEEccCCCccCCceEEEEecCCC
Confidence 23445543321 2333 233332211 12345788 55 5689999998654211 1235566777753
Q ss_pred -CcEEecc
Q 005279 293 -NYELLRG 299 (704)
Q Consensus 293 -~W~~~~~ 299 (704)
-|+..+.
T Consensus 207 GP~~~~~~ 214 (265)
T cd08985 207 GPWTDLGN 214 (265)
T ss_pred CCccccCc
Confidence 4555443
No 67
>COG2152 Predicted glycosylase [Carbohydrate transport and metabolism]
Probab=97.25 E-value=0.0011 Score=70.65 Aligned_cols=105 Identities=22% Similarity=0.347 Sum_probs=81.5
Q ss_pred cEEeeeEEEecCCcEEEEEecc-----cCCceeeEEEEEeCCCCCCccce-eEeeCCCceecC-CCCCCCcCccCCeeEE
Q 005279 190 GVWTGSATILPDGKLMMLYTGS-----TNESVQVQNLAYPADPSDPLLIK-WVKYPGNPVLVP-PPGIGAKDFRDPTTAW 262 (704)
Q Consensus 190 Gv~SGSavv~~dG~~~~~YTG~-----~~~~~q~q~lA~S~D~~D~~l~~-W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw 262 (704)
.+|.++++ ..++++.|+|-.. .........+|.|+|+ .+ |++.+ +|++.| ...++....-||.|.
T Consensus 30 ~vFNpav~-~~~~~~~~l~Rv~~~yye~~~~~s~l~ia~s~dg-----i~~~~~e~-ep~~~P~~~~~e~~G~EDPRvt- 101 (314)
T COG2152 30 SVFNPAVV-LVGGELLLLYRVVEGYYEDHSSISHLRIARSDDG-----IGEFEIEP-EPTLWPANYPYEIYGIEDPRVT- 101 (314)
T ss_pred EEecceeE-EECCEEEEEEEEeccccccCccceEEEEEecccC-----CCceecCC-cceEecCCCchhhhcccCceEE-
Confidence 68999886 4689999999872 2234567889999996 45 99874 899987 334455667899965
Q ss_pred ecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceecc
Q 005279 263 LTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLHG 303 (704)
Q Consensus 263 ~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~~ 303 (704)
+.+++|+|.+.+..+.+-...+..++|+.+|++.+.++..
T Consensus 102 -~I~~~y~mtYTa~s~~g~~~~la~t~~f~n~~rig~i~~p 141 (314)
T COG2152 102 -KIGGRYYMTYTAYSDKGPRLALAVTKDFLNWERIGAIFPP 141 (314)
T ss_pred -EECCEEEEEEEecCCCCcccchhhhhhhhhhhhcccccCC
Confidence 4679999999987665556678889999999999887653
No 68
>cd08980 GH43_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-xylosidase (EC 3.2.1.37) and alpha-L-arabinofuranosidase (EC 3.2.1.55) and possibly bifunctional xylosidase/arabinofuranosidase activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extended substrate-binding surface across the face of the propeller.
Probab=97.17 E-value=0.0074 Score=64.04 Aligned_cols=145 Identities=17% Similarity=0.189 Sum_probs=83.3
Q ss_pred cCCCCccCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccc-cccCCCCCCC--cEEeeeEEEecCC
Q 005279 126 PQKNWMNDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLA-MVADQWYDIM--GVWTGSATILPDG 202 (704)
Q Consensus 126 P~~gWmNDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~A-L~Pd~~yD~~--Gv~SGSavv~~dG 202 (704)
+...+..||+ ++.++|+++|||-..-.....+.--|....+.| ..+...+.. ..|...++.. ++.-|..++..+|
T Consensus 108 ~~~~~~iDp~-~~~ddG~~Yl~~~~~~~~~~~~~~i~~~~l~~~-~~~~g~~~~i~~p~~~we~~~~~~~EgP~~~k~~G 185 (288)
T cd08980 108 PTDRWAIDGT-VFEHNGQLYFVWSGWEGRTNGNQNLYIAKMSNP-WTLTGPRVLISRPEYDWERQGPGVNEGPAALKRNG 185 (288)
T ss_pred CCCCeeeeeE-EEEECCEEEEEEEccCCCCCCCccEEEEECCCC-CccCCcceEecCCCCCceecCceeeECcEEEEECC
Confidence 4466778996 566789988888532211111222344333433 345433333 3344444443 5678888888899
Q ss_pred cEEEEEecccC-CceeeEEEEEeCCCCCCcc-ceeEeeCCCceecCCC--CCCCcCccCCeeEEecCCCe-EEEEEeee
Q 005279 203 KLMMLYTGSTN-ESVQVQNLAYPADPSDPLL-IKWVKYPGNPVLVPPP--GIGAKDFRDPTTAWLTSEGK-WRIAIGSR 276 (704)
Q Consensus 203 ~~~~~YTG~~~-~~~q~q~lA~S~D~~D~~l-~~W~K~~~nPVl~~p~--g~~~~~fRDP~Vvw~~~~g~-w~Mv~Gs~ 276 (704)
.++|+|.+..- .....+++|+++...+++. ..|+|. .+|||...+ ++. .--...+ ....+|+ |+|++=+.
T Consensus 186 ~yYl~yS~~~~~~~~Y~v~~a~~~~~~~~~~~~~~~~~-~~pil~~~~~~~~~--g~GH~~i-v~~~~G~~~~~~yH~~ 260 (288)
T cd08980 186 KVFLTYSASGSWTPDYCLGLLTADGGADLLDPASWTKS-PTPVFQSSPENGVY--GPGHNSF-TKSPDGTEDWIVYHAR 260 (288)
T ss_pred EEEEEEECCCCCCCCCEEEEEEEcCCCCCCChhhCcCC-CCCceecCCCCccC--cCCccce-EECCCCCEEEEEEccc
Confidence 99999997653 3344567888765433322 358886 479887543 211 1113443 3356776 88886443
No 69
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=97.15 E-value=0.012 Score=63.99 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=99.6
Q ss_pred ccccccceeecC--CCCccCCCcceEEC-CEEEEEEeeCCCCC-------CCCCcEEEEEEeCCC-cceeecccccccCC
Q 005279 116 SWQRTAFHFQPQ--KNWMNDPNGPVFYK-GWYHLFYQYNPNGA-------IWGDIVWGHAVSKDL-IHWYHLPLAMVADQ 184 (704)
Q Consensus 116 ~w~Rp~~Hf~P~--~gWmNDPNG~~y~~-G~YHLFYQ~nP~~~-------~wG~~~WGHAvS~DL-vhW~~lp~AL~Pd~ 184 (704)
.|..|+.--... ...+.||. ++... |+-+|||...+... .+...+-.+..|.|- ..|.. |..|.+..
T Consensus 59 tW~~~~~i~~~~~~~~~~~~p~-~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~G~tW~~-p~~l~~~~ 136 (351)
T cd00260 59 TWSPSTVISDGDGKSSRVKDPT-VVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDDGITWSS-PRDLTPSV 136 (351)
T ss_pred cccccEEehhcCCCCCcEEcce-EEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcCCceecC-CccCCccc
Confidence 455554333332 24566886 66776 99999998887642 233556678888886 89975 43443332
Q ss_pred C-CCCCcEE--eeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE
Q 005279 185 W-YDIMGVW--TGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA 261 (704)
Q Consensus 185 ~-yD~~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv 261 (704)
. .+-...+ .|..++..+|++++.+.+....+.....+.+|+|+| .+|+... +. ++ ......|.++
T Consensus 137 ~~~~~~~~~~~~g~gi~l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G----~tW~~~~--~~--~~----~~~~~e~~i~ 204 (351)
T cd00260 137 KGDNWAALFTGPGSGIQMKDGRLVFPVYGGNAGGRVSSAIIYSDDSG----KTWKLGE--GV--ND----AGGCSECSVV 204 (351)
T ss_pred cCcceeEEEecCcCeEEecCCcEEEEEEEEcCCCCEEEEEEEECCCC----CCcEECC--CC--CC----CCCCcCCEEE
Confidence 1 0111222 233455678998876555443334556778999876 8997632 11 11 0223468865
Q ss_pred EecCCCeEEEEEeeecCCeeEEEEEEeCC-CCCcEEecc
Q 005279 262 WLTSEGKWRIAIGSRINRTGITFVYDTKD-FINYELLRG 299 (704)
Q Consensus 262 w~~~~g~w~Mv~Gs~~~~~G~~llY~S~D-l~~W~~~~~ 299 (704)
- -++|+.+|+..... .+...+|.|.| ...|+....
T Consensus 205 e-l~dG~l~~~~R~~~--~~~~~~~~S~D~G~tWs~~~~ 240 (351)
T cd00260 205 E-LSDGKLYMYTRDNS--GGRRPVYESRDMGTTWTEALG 240 (351)
T ss_pred E-ecCCEEEEEEeeCC--CCcEEEEEEcCCCcCcccCcC
Confidence 3 35898888776542 35566778876 589986443
No 70
>cd09001 GH43_XYL_2 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=97.12 E-value=0.011 Score=62.47 Aligned_cols=127 Identities=14% Similarity=0.085 Sum_probs=74.2
Q ss_pred CCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecc
Q 005279 133 DPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGS 211 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~ 211 (704)
-|. +.|.+|+|||||-.+. ..-+.|+|++.. .|+..+... ....+++.+++||+.+|+|.+.
T Consensus 78 AP~-v~~~~gkyy~yys~~~-------~~~~v~~a~~p~Gpw~~~~~~~---------~~iDp~~f~D~dG~~Yl~~~~~ 140 (269)
T cd09001 78 APS-LRYHNGTFYVFFCTNT-------GGTYIYTADDPEGPWTKTALDG---------GYHDPSLLFDDDGTAYLVYGGG 140 (269)
T ss_pred CCc-eEEECCEEEEEEEecC-------CCeEEEEcCCCCCCCcCCCcCC---------CcccCceEEcCCCCEEEEeCCC
Confidence 453 6888999999998751 124678887754 676654221 3456778778899999999643
Q ss_pred cCCceeeEEEEE-eCCCCCCccceeEeeCCCc-eecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeC
Q 005279 212 TNESVQVQNLAY-PADPSDPLLIKWVKYPGNP-VLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTK 289 (704)
Q Consensus 212 ~~~~~q~q~lA~-S~D~~D~~l~~W~K~~~nP-Vl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~ 289 (704)
.+.++. +.|. .... ...+ ++..+. ......--|++ + +.+|+|||++.+..+....+.+++|+
T Consensus 141 ------~i~~~~l~~d~-----~~~~--~~~~~~~~~~~-~~~~~~Egp~i-~-k~~G~YYl~~S~~~~~~~~~~~~~s~ 204 (269)
T cd09001 141 ------TIRLVELSPDL-----TGVG--GKDQVIIDAGE-EIGLGAEGSHL-Y-KINGYYYIFNIAWGGGGRTQTCLRSK 204 (269)
T ss_pred ------cEEEEEECccc-----CCcC--CCceEEEeCCC-ccccccccCeE-E-EECCEEEEEEecCCCCCceEEEEEeC
Confidence 234443 3332 2221 1223 333321 11122345874 4 56899999987653222355678888
Q ss_pred CCC
Q 005279 290 DFI 292 (704)
Q Consensus 290 Dl~ 292 (704)
++.
T Consensus 205 ~~~ 207 (269)
T cd09001 205 SLT 207 (269)
T ss_pred CCC
Confidence 754
No 71
>cd09003 GH43_AXH_1 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes that have been characterized with beta-xylosidase (EC 3.2.1.37), alpha-L-arabinofuranosidase (EC 3.2.1.55), xylanase (endo-alpha-L-arabinanase) as well as arabinoxylan arabinofuranohydrolase (AXH) activities. These are all inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. AXHs specifically hydrolyze the glycosidic bond between arabinofuranosyl substituents and xylopyranosyl backbone residues of arabinoxylan. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose
Probab=96.89 E-value=0.031 Score=60.50 Aligned_cols=168 Identities=14% Similarity=0.265 Sum_probs=90.9
Q ss_pred cccccccccceeec--CCCCc---cCCCcceEEC----CEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeec-ccccc
Q 005279 113 NMLSWQRTAFHFQP--QKNWM---NDPNGPVFYK----GWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHL-PLAMV 181 (704)
Q Consensus 113 ~~~~w~Rp~~Hf~P--~~gWm---NDPNG~~y~~----G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~l-p~AL~ 181 (704)
.|..|+....-|.| ...|. --|. +++++ |+|+|||--. ....|.|+|++.. .|+.. +..|.
T Consensus 55 DL~~W~~~g~v~~~~~~~~w~~~~WAP~-v~~~~~~~~gkyylyy~~~-------~~~igva~SdsP~GP~~~~~g~~l~ 126 (311)
T cd09003 55 DMVNWTDHGEIFVPNGIAKWAGNSWAPS-IAVKKINGKGKFYLYFANG-------GGGIGVLTADSPVGPWTDPLGKPLI 126 (311)
T ss_pred CCCCcEEcccccCcCCCCCcccccCCCc-eEEeccCCCCEEEEEEecC-------CCeEEEEEcCCCCCCcccCCCCeee
Confidence 35566554444432 22332 2353 57777 9999999532 3457999999965 79874 32222
Q ss_pred -cCC-CCC-CCcEEeeeEEEecCCcEEEEEecccC----CceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcC
Q 005279 182 -ADQ-WYD-IMGVWTGSATILPDGKLMMLYTGSTN----ESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKD 254 (704)
Q Consensus 182 -Pd~-~yD-~~Gv~SGSavv~~dG~~~~~YTG~~~----~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~ 254 (704)
+.. ..+ ......+++++++||+.+|+|.+... ...+.+.+|.-.+. +.+ ..+.++....+ ..
T Consensus 127 ~~~~~~~~~~~~~iDp~~f~DdDG~~Yl~~g~~~~~~~~~~~~~i~i~~l~~D----~~~---~~g~~~~i~~~----~~ 195 (311)
T cd09003 127 TGSTPGCAGVVWLFDPAVFVDDDGQGYLYFGGGVPGGRWANPNTARVIKLGDD----MIS---VDGSAVTIDAP----YF 195 (311)
T ss_pred cCCCCCccCCccccCCCeEECCCCCEEEEECCccCCCccccCCCEEEEEeCCC----cee---ccCCceEccCC----Cc
Confidence 111 111 11246888888889999999975321 11133445544321 122 22333332211 12
Q ss_pred ccCCeeEEecCCCeEEEEEeeec-------CCeeEEEEEEeCCCC-CcEEeccee
Q 005279 255 FRDPTTAWLTSEGKWRIAIGSRI-------NRTGITFVYDTKDFI-NYELLRGVL 301 (704)
Q Consensus 255 fRDP~Vvw~~~~g~w~Mv~Gs~~-------~~~G~~llY~S~Dl~-~W~~~~~l~ 301 (704)
+-=|. ++ +.+|+|||++.+.- .....+.+.+|++.. -|+..++++
T Consensus 196 ~Egp~-~~-K~~G~YYL~ys~~~~~~~~~~~~~y~v~y~~s~~~~GP~~~~g~il 248 (311)
T cd09003 196 FEASG-LH-KINGTYYYSYCTNFGGRDPGKPPPGRIAYMTSKNPMGPFTYKGIIL 248 (311)
T ss_pred eEeee-EE-EECCEEEEEEeCCCCccCCCCCCceeEEEEEcCCCCCCcccCCEec
Confidence 34577 44 57899999886541 223455556777643 466544443
No 72
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=96.84 E-value=0.014 Score=66.90 Aligned_cols=141 Identities=21% Similarity=0.381 Sum_probs=79.8
Q ss_pred EEEEeCCCcceeecccccccCC------C-CCCCcEEeeeEEEecCCcEEEEEecccCCc---eeeEEEEEeCCCCCCcc
Q 005279 163 GHAVSKDLIHWYHLPLAMVADQ------W-YDIMGVWTGSATILPDGKLMMLYTGSTNES---VQVQNLAYPADPSDPLL 232 (704)
Q Consensus 163 GHAvS~DLvhW~~lp~AL~Pd~------~-yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~---~q~q~lA~S~D~~D~~l 232 (704)
.-+.|+||+||+...-.|.+.. . -+..|||..++. .+||+++|+||-..... .-..+..++.+..+
T Consensus 56 ~i~hS~DL~nW~~v~tpl~~~~~ld~kgn~~~S~giWAPdl~-y~dGkfwl~ytdvk~~~g~~k~~~nyl~t~~s~~--- 131 (549)
T COG3507 56 AIHHSRDLVNWTLVSTPLIRTSQLDLKGNFPYSGGIWAPDLS-YHDGKFWLYYTDVKRSGGPYKNAGNYLVTAESID--- 131 (549)
T ss_pred eeeccccccCcEEecccccCcchhhhhcccCCCCceecccee-cCCCcEEEEEecccccCCcccccccEEEEecCCC---
Confidence 3477999999998876555543 2 146789999986 79999999998654321 11122233322211
Q ss_pred ceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCC------eeEEEEEEeCCCCCcEEecc----eec
Q 005279 233 IKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINR------TGITFVYDTKDFINYELLRG----VLH 302 (704)
Q Consensus 233 ~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~------~G~~llY~S~Dl~~W~~~~~----l~~ 302 (704)
..|.. |+..+-. .--||.+ +++++|+-+|+.|+-..+ .|+++ +-.|-..-++.+. ++.
T Consensus 132 G~WsD----pi~l~~~-----~~iDPsl-f~D~dGr~wlv~~~w~~~~~~~~~~~i~l--~~~~~~~~~l~g~~~~~~~~ 199 (549)
T COG3507 132 GPWSD----PIKLNGS-----NAIDPSL-FFDKDGRKWLVNGSWDGGIFMHSFAGIIL--QEYDKTTQKLVGQGYKIIFD 199 (549)
T ss_pred CCccc----ceecCCc-----CccCCce-eecCCCCEEEEecccCCCcccccccceee--eeccccccccCCccceeEec
Confidence 35643 4443221 1249995 457788888888876421 23433 3333222223232 332
Q ss_pred cCCCCCceeeeeeEEcCC
Q 005279 303 GVPNTGMWECVDFYPVST 320 (704)
Q Consensus 303 ~~~~~gmWECPdlf~l~~ 320 (704)
. .+.+.-|-|-+++.++
T Consensus 200 G-~~~~~~EGPhl~k~~g 216 (549)
T COG3507 200 G-GNGGLTEGPHLYKKTG 216 (549)
T ss_pred c-CCCccccCceeeccCC
Confidence 2 1123678888877653
No 73
>cd09000 GH43_XYL_1 Glycosyl hydrolase family 43, beta-D-xylosidase. This glycosyl hydrolase family 43 (GH43) includes mostly enzymes that have been characterized to have beta-1,4-xylosidase (beta-D-xylosidase;xylan 1,4-beta-xylosidase; EC 3.2.1.37) activity. They are part of an array of hemicellulases that are involved in the final breakdown of plant cell-wall whereby they degrade xylan. They hydrolyze beta-1,4 glycosidic bonds between two xylose units in short xylooligosaccharides. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially enclosed at one end, forms a single extend
Probab=96.84 E-value=0.034 Score=59.06 Aligned_cols=142 Identities=16% Similarity=0.095 Sum_probs=80.2
Q ss_pred cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCc-ceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEec
Q 005279 132 NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLI-HWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTG 210 (704)
Q Consensus 132 NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLv-hW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG 210 (704)
.-|. ++|++|+|||||-..... +...-+.|+|+|.- -|++ +. +.+. .+..++++.++||+++|+|-.
T Consensus 69 WAP~-v~~~~g~yy~yy~~~~~~---~~~~~~v~~s~~p~gpw~~-~~-~~~~------~~iDp~vf~d~dG~~Y~~~~~ 136 (288)
T cd09000 69 WAPT-IRYHDGTFYLITTNVDGM---KDGGNFIVTADDPAGPWSD-PV-WLDS------GGIDPSLFFDDDGKVYLVGNG 136 (288)
T ss_pred Ecce-EEEECCEEEEEEEecCCC---CCCceEEEEeCCCCCCCcC-CE-ecCC------CccCCceeEcCCCCEEEEecc
Confidence 3464 688899999999876432 23345678898873 6764 22 2221 456788877779999998865
Q ss_pred ccCC----ceeeEEEEEeCCCCCCccceeEeeCCCce-ecCCCCCCCcCccCCeeEEecCCCeEEEEEeeec-CCeeEEE
Q 005279 211 STNE----SVQVQNLAYPADPSDPLLIKWVKYPGNPV-LVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRI-NRTGITF 284 (704)
Q Consensus 211 ~~~~----~~q~q~lA~S~D~~D~~l~~W~K~~~nPV-l~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~-~~~G~~l 284 (704)
.... ..+.+.++.... ..++- .+.|+ +..... ..-.--|. ++ +.+|+|||++.... ...-.+.
T Consensus 137 ~~~~~~~~~~~~i~~~~l~~------~~~~~-~~~~~~~~~~~~--~~~~Egp~-v~-k~~g~YYl~ys~~~~~~~~~v~ 205 (288)
T cd09000 137 WDERRGYNGHGGIWLQEIDL------ETGKL-LGEPKVIWNGTG--GRWPEGPH-LY-KRDGWYYLLIAEGGTGYGHSVT 205 (288)
T ss_pred cCCccccCCCCcEEEEEEcc------ccCCC-CCCcEEEEeCCC--CCCcccCe-EE-EECCEEEEEEecCCCCCCeEEE
Confidence 4221 113344553322 11211 12221 111100 01123587 44 46899999986432 2223577
Q ss_pred EEEeCCCC-CcEE
Q 005279 285 VYDTKDFI-NYEL 296 (704)
Q Consensus 285 lY~S~Dl~-~W~~ 296 (704)
+++|+++. -|+.
T Consensus 206 ~~~s~~~~Gp~~~ 218 (288)
T cd09000 206 VARSRSITGPYEP 218 (288)
T ss_pred EEEeCCCCCCCcc
Confidence 88999876 5655
No 74
>PF13088 BNR_2: BNR repeat-like domain; PDB: 2F11_A 2F0Z_A 1VCU_B 2F25_B 1SO7_A 2F29_A 1SNT_A 2F13_A 2F28_A 2F27_A ....
Probab=96.24 E-value=0.1 Score=54.31 Aligned_cols=161 Identities=15% Similarity=0.098 Sum_probs=86.5
Q ss_pred CEEEEEEeeCCCCCCCCCcEEEEEEe--CCC-cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCc---
Q 005279 142 GWYHLFYQYNPNGAIWGDIVWGHAVS--KDL-IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNES--- 215 (704)
Q Consensus 142 G~YHLFYQ~nP~~~~wG~~~WGHAvS--~DL-vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~--- 215 (704)
|....|+.- +...|...-.-.+| +|. .+|...-. +.... .....+..++.+.+++|+++|+|+......
T Consensus 1 G~l~a~~~~---~~~~~~~d~~i~~S~s~D~G~tWs~~~~-v~~~~-~~~~~~~~p~~~~~~~g~l~l~~~~~~~~~~~~ 75 (275)
T PF13088_consen 1 GRLLAVWEG---GSDEGAIDIVIRRSRSTDGGKTWSEPRI-VADGP-KPGRRYGNPSLVVDPDGRLWLFYSAGSSGGGWS 75 (275)
T ss_dssp SEEEEEEEE---SSCSCCEEEEEEEECCCCCTTEEEEEEE-EETST-BTTCEEEEEEEEEETTSEEEEEEEEEETTESCC
T ss_pred CeEEEEEEC---CcccCCCCEEEEEEEeeCCCCeeCCCEE-Eeecc-ccCCcccCcEEEEeCCCCEEEEEEEccCCCCCC
Confidence 455666655 44455555555555 987 88987543 33332 123456777777778999999995543221
Q ss_pred eeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEe-CCCCCc
Q 005279 216 VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDT-KDFINY 294 (704)
Q Consensus 216 ~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S-~Dl~~W 294 (704)
.......+|.|+| ++|.... .|...+........+.+-+. -.+|++++..-........+.++.| +..+.|
T Consensus 76 ~~~~~~~~S~D~G----~TWs~~~--~l~~~~~~~~~~~~~~~~i~--~~~G~l~~~~~~~~~~~~~~~~~~S~D~G~tW 147 (275)
T PF13088_consen 76 GSRIYYSRSTDGG----KTWSEPT--DLPPGWFGNFSGPGRGPPIQ--LPDGRLIAPYYHESGGSFSAFVYYSDDGGKTW 147 (275)
T ss_dssp TCEEEEEEESSTT----SS-EEEE--EEHHHCCCSCEECSEEEEEE--ECTTEEEEEEEEESSCEEEEEEEEESSTTSSE
T ss_pred ceeEEEEEECCCC----CCCCCcc--ccccccccceeccceeeeeE--ecCCCEEEEEeeccccCcceEEEEeCCCCcee
Confidence 1122238999976 9999863 22222111111222333222 3588887763222222344444445 557899
Q ss_pred EEecceeccCCCCCceeeeeeEEcC
Q 005279 295 ELLRGVLHGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 295 ~~~~~l~~~~~~~gmWECPdlf~l~ 319 (704)
+....+. ...+.+| |.+++++
T Consensus 148 ~~~~~~~---~~~~~~e-~~~~~~~ 168 (275)
T PF13088_consen 148 SSGSPIP---DGQGECE-PSIVELP 168 (275)
T ss_dssp EEEEECE---CSEEEEE-EEEEEET
T ss_pred ecccccc---ccCCcce-eEEEECC
Confidence 9866543 1112344 4555555
No 75
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=96.18 E-value=0.4 Score=50.15 Aligned_cols=213 Identities=17% Similarity=0.311 Sum_probs=107.8
Q ss_pred cccccceeecCCCCc--cCCCcceEECCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccccCCCCCCCcEEee
Q 005279 117 WQRTAFHFQPQKNWM--NDPNGPVFYKGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMVADQWYDIMGVWTG 194 (704)
Q Consensus 117 w~Rp~~Hf~P~~gWm--NDPNG~~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~Pd~~yD~~Gv~SG 194 (704)
|--..--.+|..||. -||- .++++|+||+|.-..-.+..||-|.. ..+-+|.....|= ...-+. +.-..
T Consensus 9 WtStg~L~~Pk~g~~slKD~T-~V~ynGk~~VyAtt~d~~~~y~sm~f-----~~Ftdws~~~sA~--q~~m~~-~~vAP 79 (271)
T PF03664_consen 9 WTSTGPLAQPKSGWVSLKDFT-IVPYNGKHHVYATTADTGGGYGSMNF-----GPFTDWSQMASAS--QNYMDQ-SAVAP 79 (271)
T ss_pred eccCCccccCCCCceeccCce-EEeECCEEEEEEEeccCCCccceEee-----eccCCHHHhhccc--cccCCc-ccccc
Confidence 333344567888996 6996 79999999999987755555544433 3455777665431 111111 11111
Q ss_pred eEE-EecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecC-CCCCCCcCccCCeeEEecCCCeEEEE
Q 005279 195 SAT-ILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP-PPGIGAKDFRDPTTAWLTSEGKWRIA 272 (704)
Q Consensus 195 Sav-v~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~-p~g~~~~~fRDP~Vvw~~~~g~w~Mv 272 (704)
.+. ..+....||.|--.... -.-..+.|..+| ..|... .|++.. ..+. ....-|..|+- .+..-||+
T Consensus 80 ~vFYFaPk~~W~L~yQwg~~~----fsY~Ts~Dptnp--ngWSap--q~lf~g~i~~~-~~g~iD~~vI~--D~~n~yLF 148 (271)
T PF03664_consen 80 QVFYFAPKNIWYLAYQWGPAA----FSYSTSSDPTNP--NGWSAP--QPLFSGSISGS-GTGPIDQWVIC--DDTNMYLF 148 (271)
T ss_pred eEEEecCCcEEEEEEecCCCc----ceeecCCCCCCC--ccCCCC--cccccccccCC-CCCceeeEEEe--cCCceEEE
Confidence 111 25677788888522110 112345566665 457653 455432 1221 23457888775 23334555
Q ss_pred EeeecCCeeEEEEEEeCC-CCCc----EEecceeccCCCCCceeeeeeEEcCCCCCCCcccccCCCCcEEEEEEeeCCCC
Q 005279 273 IGSRINRTGITFVYDTKD-FINY----ELLRGVLHGVPNTGMWECVDFYPVSTTGEHGLDTSHNGPGVKHVVKASMDDDR 347 (704)
Q Consensus 273 ~Gs~~~~~G~~llY~S~D-l~~W----~~~~~l~~~~~~~gmWECPdlf~l~~~~~~gl~~~~~g~~~k~VL~~s~~~~~ 347 (704)
.... + |. +|+|.- +-++ .-...+..........|.++.|+|.+. .+++|++..-+..
T Consensus 149 fa~D-n--Gk--iYRs~~~i~nFP~~fgs~~~vvmsd~~~nLFEA~~VYkv~G~-------------~~YLmiVEaiGs~ 210 (271)
T PF03664_consen 149 FAGD-N--GK--IYRSSMPIGNFPGGFGSSYTVVMSDTRNNLFEAVQVYKVKGQ-------------NQYLMIVEAIGSD 210 (271)
T ss_pred EcCC-C--Cc--EEEeccchhhCCCCCCCceEEEEecCccceeeeeEEEEEcCC-------------ceEEEEEEEecCC
Confidence 4432 2 44 588753 2221 100111111122348999999999752 2666666544433
Q ss_pred ceEEEEEEeeCCceeeecCC
Q 005279 348 HDYYAIGTYHEKNVTWVPDN 367 (704)
Q Consensus 348 ~~~Y~iG~~d~~~~~f~p~~ 367 (704)
+.||.-=+=..-.+.|+|..
T Consensus 211 gRyFRSfTa~sL~G~Wtp~A 230 (271)
T PF03664_consen 211 GRYFRSFTATSLDGPWTPQA 230 (271)
T ss_pred CcEEEeeecCCCCCcceecc
Confidence 33332211111124677653
No 76
>cd08982 GH43_3 Glycosyl hydrolase family 43. This glycosyl hydrolase family 43 (GH43) includes enzymes with beta-1,4-xylosidase (xylan 1,4-beta-xylosidase; EC 3.2.1.37), beta-1,3-xylosidase (EC 3.2.1.-), alpha-L-arabinofuranosidase (EC 3.2.1.55), arabinanase (EC 3.2.1.99), xylanase (EC 3.2.1.8), endo-alpha-L-arabinanase and galactan 1,3-beta-galactosidase (EC 3.2.1.145) activities. These are inverting enzymes (i.e. they invert the stereochemistry of the anomeric carbon atom of the substrate) that have an aspartate as the catalytic general base, a glutamate as the catalytic general acid and another aspartate that is responsible for pKa modulation and orienting the catalytic acid. Many of the enzymes in this family display both alpha-L-arabinofuranosidase and beta-D-xylosidase activity using aryl-glycosides as substrates. A common structural feature of GH43 enzymes is a 5-bladed beta-propeller domain that contains the catalytic acid and catalytic base. A long V-shaped groove, partially e
Probab=95.76 E-value=0.089 Score=56.60 Aligned_cols=135 Identities=17% Similarity=0.194 Sum_probs=73.9
Q ss_pred CCCCccCCCcceEE-CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc----cCCCCC----------CCcE
Q 005279 127 QKNWMNDPNGPVFY-KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV----ADQWYD----------IMGV 191 (704)
Q Consensus 127 ~~gWmNDPNG~~y~-~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~----Pd~~yD----------~~Gv 191 (704)
...+.-||+ ++.+ +|+.+|+|-.. .++ .-|+--.+.|+..=.-.+..+. |+..+. ..++
T Consensus 87 ~~~~~IDp~-vf~DdDGk~Yl~~g~~----~~~-~i~~~eL~~d~~~~~g~~~~l~~~~~~~~~We~~g~~~~~~~~~~~ 160 (295)
T cd08982 87 FPPGLADPA-LFIDDDGRLYLYYGCS----NNY-PLRGVEVDPDTFRPIGEPVELIPGNPDKHGWERFGENNDNPDKTPW 160 (295)
T ss_pred cCCCccCCc-eEECCCCCEEEEEecC----CCC-CeEEEEECcccCCccCcceEEEeCCCCCcCeEecCcccccccCCcc
Confidence 345677996 4554 59999998421 111 1244444445432111121111 111111 2346
Q ss_pred EeeeEEEecCCcEEEEEecccCC-ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCCeEE
Q 005279 192 WTGSATILPDGKLMMLYTGSTNE-SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEGKWR 270 (704)
Q Consensus 192 ~SGSavv~~dG~~~~~YTG~~~~-~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~ 270 (704)
.-|..++..+|+++|+|++.... ..-.+.+|+|++. +..|++...|||+..+.+. ...--...++ ...+|+|+
T Consensus 161 ~EGP~i~k~~G~YYL~yS~~~~~~~~Y~v~~a~s~~p----~GP~~~~~~~pil~~~~~~-~~g~GH~s~v-~~~~G~~~ 234 (295)
T cd08982 161 MEGAWMTKHNGKYYLQYAAPGTEFNTYADGVYVSDSP----LGPFTYQPHNPFSYKPGGF-ITGAGHGSTF-QDKYGNYW 234 (295)
T ss_pred ccccEEEEECCEEEEEEeCCCcccCcEeEEEEEeCCC----CCCCCcCCCCccccCCCCe-EecCCcccEE-ECCCCCEE
Confidence 77888888899999999865322 2235778888764 4567776678988654321 0011123333 35678888
Q ss_pred EEE
Q 005279 271 IAI 273 (704)
Q Consensus 271 Mv~ 273 (704)
++.
T Consensus 235 ~~y 237 (295)
T cd08982 235 HVG 237 (295)
T ss_pred EEE
Confidence 775
No 77
>PF00251 Glyco_hydro_32N: Glycosyl hydrolases family 32 N-terminal domain; InterPro: IPR013148 This domain corresponds to the N-terminal domain of glycosyl transferase family 32 which forms a five bladed beta propeller structure []. ; PDB: 2AEZ_A 2ADE_A 2ADD_A 1ST8_A 2AEY_A 3UGG_A 3UGH_B 3UGF_B 1Y9M_A 1Y4W_A ....
Probab=95.73 E-value=0.21 Score=53.90 Aligned_cols=140 Identities=21% Similarity=0.307 Sum_probs=88.6
Q ss_pred CCCCCcccccccccceeecCCCCccCCCcc-----eEECCEEEEEEeeCCCCCCCCCcEEEEEEe-CCCcceeecc---c
Q 005279 108 YPWTNNMLSWQRTAFHFQPQKNWMNDPNGP-----VFYKGWYHLFYQYNPNGAIWGDIVWGHAVS-KDLIHWYHLP---L 178 (704)
Q Consensus 108 ~~~~~~~~~w~Rp~~Hf~P~~gWmNDPNG~-----~y~~G~YHLFYQ~nP~~~~wG~~~WGHAvS-~DLvhW~~lp---~ 178 (704)
..-+..++.|++...=+.|... .|.+|. +..++.+|+||.-+-... ...-..|+| .|.+||+..+ +
T Consensus 42 Ha~S~Dlv~W~~~~~aL~P~~~--~d~~g~~SGs~~~~~~~~~~~YTg~~~~~---~~~q~~A~s~d~~~~w~k~~~~~p 116 (308)
T PF00251_consen 42 HATSKDLVHWEHLPVALPPDEE--YDADGCFSGSAVVDDDNLVLFYTGNNRDG---KQVQCLAYSTDDGITWTKYPQGNP 116 (308)
T ss_dssp EEEESSSSSEEEEEEEE-SSSG--GGTTEEEEEEEEEETTCEEEEEEEEETTT---EEEEEEEEESSTTSSEEE-TTTCE
T ss_pred EEECCCCCCceeCCceEccccc--CCcCccCcceEEEECCEEEEEEeccCCCC---CeEEEEEEECCCCCceEEcCCCCc
Confidence 3445678899876666666643 366772 335789999998765421 345678999 8899999853 3
Q ss_pred ccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCC
Q 005279 179 AMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDP 258 (704)
Q Consensus 179 AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP 258 (704)
.|......+..+.=...++...+|+++|+..+... ......+..|+| |++|+.. .++...... ....+--|
T Consensus 117 vi~~~p~~~~~~~RDP~v~~~~~~~~~m~~g~~~~-~~g~i~~y~S~D-----l~~W~~~--~~l~~~~~~-~g~~~ECP 187 (308)
T PF00251_consen 117 VIPEPPPGDTTDFRDPKVFWREDGRWYMLLGAGRD-GRGCILLYTSDD-----LIHWEYL--GPLFIPGDN-GGGMWECP 187 (308)
T ss_dssp SBESSSTTSCTSEEEEEEEEECTTEEEEEEEEEET-TEEEEEEEEESS-----SSSEEEE--EEESEEETT-TSSEEEEE
T ss_pred EEEecccCCCCccccCeEEEecCCEEEEEEecccc-CcceEEEEEcCC-----cccCcee--Ccccccccc-cccccccc
Confidence 34321112556677888866778999999877655 345566778877 5899886 344332221 12345567
Q ss_pred eeE
Q 005279 259 TTA 261 (704)
Q Consensus 259 ~Vv 261 (704)
-.+
T Consensus 188 dlf 190 (308)
T PF00251_consen 188 DLF 190 (308)
T ss_dssp EEE
T ss_pred eEE
Confidence 743
No 78
>cd08987 GH62 Glycosyl hydrolase family 62, characterized arabinofuranosidases. The glycosyl hydrolase family 62 includes eukaryotic and prokaryotic enzymes, most of which are characterized arabinofuranosidases (alpha-L-arabinofuranosidases; EC 3.2.1.55) that specifically cleave either alpha-1,2 or alpha-1,3-L-arabinofuranose side chains from xylans. The enzyme does not act on xylose moieties in xylan that are adorned with an arabinose side chain at both O2 and O3 positions, nor does it display any non-specific arabinofuranosidase activity. Several of these enzymes also contain carbohydrate binding modules (CBMs) that bind cellulose or xylan. The catalytic mechanism of this family has not yet been determined, but is predicted to display a single displacement or inverting mechanism, based on its location in the same carbohydrate-active enzymes database (CAZY) clan (Clan F) as that occupied by GH43, a well characterized inverting family. Similarly, the catalytic residues are predicted fr
Probab=94.91 E-value=0.99 Score=48.67 Aligned_cols=142 Identities=11% Similarity=0.139 Sum_probs=75.4
Q ss_pred CCCcceEE--CCEEEEEEeeCCCCCCCCCcEEEEEEeCCCcc---eeecccccccCCCCCCCcEEeeeEEEecCCcEEEE
Q 005279 133 DPNGPVFY--KGWYHLFYQYNPNGAIWGDIVWGHAVSKDLIH---WYHLPLAMVADQWYDIMGVWTGSATILPDGKLMML 207 (704)
Q Consensus 133 DPNG~~y~--~G~YHLFYQ~nP~~~~wG~~~WGHAvS~DLvh---W~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~ 207 (704)
-|. ++|+ +++|+||||+.+ ...++|+|..+ |...-........-...|...-.+ +.+|+++|||
T Consensus 80 APq-Vfyf~pk~kwYL~Yq~~~---------~~yaTs~dp~~P~~ws~~qpl~~~~~~~~~~~~ID~~v-I~Dd~~~YLf 148 (303)
T cd08987 80 APQ-VFYFAPQNKWYLIYQWWP---------AAYSTNSDISNPNGWSAPQPLFSGTPNGSPGGWIDFWV-ICDDTNCYLF 148 (303)
T ss_pred cCE-EeeeccCCEEEEEEecCc---------eEEEeCCCCCCCCccCCCcccccCcccCCCCCccceeE-EeCCCCEEEE
Confidence 564 5555 699999999732 45899999764 764322222111112234445555 6789999999
Q ss_pred EecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeEEecCCC--eEEEEEeeecCCee-EEE
Q 005279 208 YTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTAWLTSEG--KWRIAIGSRINRTG-ITF 284 (704)
Q Consensus 208 YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vvw~~~~g--~w~Mv~Gs~~~~~G-~~l 284 (704)
+.+.+. .+..|-... .+|-..-.+++....++-...-|-=|.| + +.+| +|+|++-+.....+ -..
T Consensus 149 f~~dnG----~iyra~~~~------~nFp~~~~~~~~~~~~~~~~~lfEa~~V-y-kv~G~~~YlmiveA~g~~~~rYfr 216 (303)
T cd08987 149 FSDDNG----KLYRSSTTL------GNFPNGGTETVIIMSDSNKNNLFEASNV-Y-KVKGQNQYLLIVEAIGSDGGRYFR 216 (303)
T ss_pred EecCCC----eEEEEecch------hhCCCCCCccEEEecCCCccccceeeEE-E-EECCCeEEEEEEEecCCCCCCeEE
Confidence 987542 233343222 1122111123222110111234566884 4 3445 99999977642112 222
Q ss_pred EEEeCCCC-CcEEe
Q 005279 285 VYDTKDFI-NYELL 297 (704)
Q Consensus 285 lY~S~Dl~-~W~~~ 297 (704)
-++|++|. .|+..
T Consensus 217 s~Ts~Sl~GpWt~~ 230 (303)
T cd08987 217 SWTATSLDGPWTPL 230 (303)
T ss_pred EEEcCCCCCCceec
Confidence 36777764 68865
No 79
>cd00260 Sialidase Sialidases or neuraminidases function to bind and hydrolyze terminal sialic acid residues from various glycoconjugates as well as playing roles in pathogenesis, bacterial nutrition and cellular interactions. They have a six-bladed, beta-propeller fold with the non-viral sialidases containing 2-5 Asp-box motifs (most commonly Ser/Thr-X-Asp-[X]-Gly-X-Thr- Trp/Phe). This CD includes eubacterial, eukaryotic, and viral sialidases.
Probab=94.02 E-value=9.3 Score=41.44 Aligned_cols=146 Identities=17% Similarity=0.175 Sum_probs=84.5
Q ss_pred CcEEEEEEeCC-CcceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCC----------ceeeEEEEEeCCC
Q 005279 159 DIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNE----------SVQVQNLAYPADP 227 (704)
Q Consensus 159 ~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~----------~~q~q~lA~S~D~ 227 (704)
.+....++|+| ..+|... .++..... ....++.++.+.+.+|+++|||...... ....+.+.+|.|.
T Consensus 45 ~~~iv~~~S~D~G~tW~~~-~~i~~~~~-~~~~~~~p~~v~~~~g~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~S~D~ 122 (351)
T cd00260 45 AIDIVARRSTDGGKTWSPS-TVISDGDG-KSSRVKDPTVVVDGLGRVFLLVGSFPNGEGEDNDYAGPSNAYLVLVYSDDD 122 (351)
T ss_pred ccceeEEEeccCCCccccc-EEehhcCC-CCCcEEcceEEEcCCCCEEEEEEECCCcccccccccCCCceEEEEEEEEcC
Confidence 56677788887 5899885 44444332 2356788888776559999999865431 2356778899887
Q ss_pred CCCccceeEeeCCCceecCC--CCCCCcCccCC--eeEEecCCCeEEEEEeeecC--CeeEEEEEEeCCCCCcEEeccee
Q 005279 228 SDPLLIKWVKYPGNPVLVPP--PGIGAKDFRDP--TTAWLTSEGKWRIAIGSRIN--RTGITFVYDTKDFINYELLRGVL 301 (704)
Q Consensus 228 ~D~~l~~W~K~~~nPVl~~p--~g~~~~~fRDP--~Vvw~~~~g~w~Mv~Gs~~~--~~G~~llY~S~Dl~~W~~~~~l~ 301 (704)
+ .+|.+. ..+.... ..+ ..-++-| -+. -++|+++|.+-.... ..-..++|..++.+.|++... .
T Consensus 123 G----~tW~~p--~~l~~~~~~~~~-~~~~~~~g~gi~--l~~Grlv~p~~~~~~~~~~~~~~~~S~D~G~tW~~~~~-~ 192 (351)
T cd00260 123 G----ITWSSP--RDLTPSVKGDNW-AALFTGPGSGIQ--MKDGRLVFPVYGGNAGGRVSSAIIYSDDSGKTWKLGEG-V 192 (351)
T ss_pred C----ceecCC--ccCCccccCcce-eEEEecCcCeEE--ecCCcEEEEEEEEcCCCCEEEEEEEECCCCCCcEECCC-C
Confidence 6 899763 1222111 111 1112233 122 247888776654432 223455565666899986332 2
Q ss_pred ccCCCCCceeeeeeEEcC
Q 005279 302 HGVPNTGMWECVDFYPVS 319 (704)
Q Consensus 302 ~~~~~~gmWECPdlf~l~ 319 (704)
.. ..++.| |.+++++
T Consensus 193 ~~--~~~~~e-~~i~el~ 207 (351)
T cd00260 193 ND--AGGCSE-CSVVELS 207 (351)
T ss_pred CC--CCCCcC-CEEEEec
Confidence 21 134566 5677875
No 80
>PF13859 BNR_3: BNR repeat-like domain; PDB: 3B69_A.
Probab=92.27 E-value=0.63 Score=50.67 Aligned_cols=87 Identities=22% Similarity=0.460 Sum_probs=49.9
Q ss_pred eeEEEecCCcEEEEEecccCCce-eeEEEEEeCCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-EecCCCeEEE
Q 005279 194 GSATILPDGKLMMLYTGSTNESV-QVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WLTSEGKWRI 271 (704)
Q Consensus 194 GSavv~~dG~~~~~YTG~~~~~~-q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~~~~g~w~M 271 (704)
||-|+.+||++++=-.+..++.. .+-.|-||+|.+ .+|+-..+ ......+||.|+ | ++|+-.|
T Consensus 124 GSGV~m~dGTLVFPv~a~~~~~~~~~SlIiYS~d~g----~~W~lskg---------~s~~gC~~psv~EW--e~gkLlM 188 (310)
T PF13859_consen 124 GSGVVMEDGTLVFPVQATKKNGDGTVSLIIYSTDDG----KTWKLSKG---------MSPAGCSDPSVVEW--EDGKLLM 188 (310)
T ss_dssp EE-EE-TTS-EEEEEEEEETT---EEEEEEEESSTT----SS-EE-S-------------TT-EEEEEEEE---TTEEEE
T ss_pred CCceEEcCCCEEEEEeeeccCccceEEEEEEECCCc----cceEeccc---------cCCCCcceEEEEec--cCCeeEE
Confidence 45566789999887777666555 367789999965 89986432 223456899987 6 5788777
Q ss_pred EEeeecCCeeEEEEEEeCCC-CCcEEec
Q 005279 272 AIGSRINRTGITFVYDTKDF-INYELLR 298 (704)
Q Consensus 272 v~Gs~~~~~G~~llY~S~Dl-~~W~~~~ 298 (704)
+.... .|.--+|+|.|. ..|+..-
T Consensus 189 ~~~c~---~g~rrVYeS~DmG~tWtea~ 213 (310)
T PF13859_consen 189 MTACD---DGRRRVYESGDMGTTWTEAL 213 (310)
T ss_dssp EEE-T---TS---EEEESSTTSS-EE-T
T ss_pred EEecc---cceEEEEEEcccceehhhcc
Confidence 75432 255568999885 6799733
No 81
>COG3940 Predicted beta-xylosidase [General function prediction only]
Probab=87.06 E-value=3.8 Score=42.27 Aligned_cols=113 Identities=24% Similarity=0.379 Sum_probs=69.2
Q ss_pred CccCCCcceEECCE-EEEEEeeCCCCCCCCCcEEEEEEeCCCcceeecccccc-cCCCCCCCcEE--eeeEEEecCCcEE
Q 005279 130 WMNDPNGPVFYKGW-YHLFYQYNPNGAIWGDIVWGHAVSKDLIHWYHLPLAMV-ADQWYDIMGVW--TGSATILPDGKLM 205 (704)
Q Consensus 130 WmNDPNG~~y~~G~-YHLFYQ~nP~~~~wG~~~WGHAvS~DLvhW~~lp~AL~-Pd~~yD~~Gv~--SGSavv~~dG~~~ 205 (704)
+.=|-. .++++|+ |+++-|-.|.- -|+...-.|.-.+-.+-+-.|+.|. |.-+|+..|.| .|-||+..+|++.
T Consensus 131 fsldat-tfeh~gk~yyvwaqkdp~i--~gnsniyiaemenpwtikgepvmlskpe~dwe~~gfwvnegpav~k~ngkif 207 (324)
T COG3940 131 FSLDAT-TFEHNGKLYYVWAQKDPNI--KGNSNIYIAEMENPWTIKGEPVMLSKPELDWEIKGFWVNEGPAVLKKNGKIF 207 (324)
T ss_pred ceeeee-eeeeCCEEEEEEeccCCCc--cCCcceEEEeccCCceecCceEEecCCCcccEEEEEEecCCceEEEECCEEE
Confidence 333442 4667775 88888888853 3555555666555433344455443 44456667766 6888888999999
Q ss_pred EEEecccCCceeeEEEEEeCCCCCCc-cceeEeeCCCceecC
Q 005279 206 MLYTGSTNESVQVQNLAYPADPSDPL-LIKWVKYPGNPVLVP 246 (704)
Q Consensus 206 ~~YTG~~~~~~q~q~lA~S~D~~D~~-l~~W~K~~~nPVl~~ 246 (704)
+-|.+...+-.-+.+|-+....+|++ -.+|+|.+ .||+..
T Consensus 208 i~ysasatd~nycmgllwanen~dlldpaswtksp-tpvf~t 248 (324)
T COG3940 208 ITYSASATDVNYCMGLLWANENSDLLDPASWTKSP-TPVFKT 248 (324)
T ss_pred EEEeccccccceeeeeeeecccCCcCCchhcccCC-Ccceee
Confidence 99998654323344444443333221 16899974 788863
No 82
>PTZ00334 trans-sialidase; Provisional
Probab=86.69 E-value=5 Score=48.77 Aligned_cols=123 Identities=21% Similarity=0.355 Sum_probs=70.7
Q ss_pred CC-CcEEEEEEeC-----CCcceeecccccccCC-CCCC---CcEE--eeeEEEecCCcEEEEEecccCCceeeEEEEEe
Q 005279 157 WG-DIVWGHAVSK-----DLIHWYHLPLAMVADQ-WYDI---MGVW--TGSATILPDGKLMMLYTGSTNESVQVQNLAYP 224 (704)
Q Consensus 157 wG-~~~WGHAvS~-----DLvhW~~lp~AL~Pd~-~yD~---~Gv~--SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S 224 (704)
|+ ...+|+++-. .-|+|.+ +.+|.... .... .+.+ =||.|+..||++++=-.+..++...+-.+-||
T Consensus 215 ~~l~Lv~G~Vt~~~~~~~k~I~W~~-~~~l~~~~~~~~~~~l~~~iggGGSGI~medGTLVFPv~a~~~~g~~vslIiYS 293 (780)
T PTZ00334 215 WGLLVAVGNVSNDGSSGKKKIYWKD-ASVIPWTDFEKQHESLTRLIGGGGSGVQMKDGTLVFPVEGTKKDGKAVSLIIYS 293 (780)
T ss_pred CccEEEEEEeecCCCCCcceEECcC-cccCCccccccccccceeecCCCcCeEEecCCeEEEEEEEEcCCCCEEEEEEEe
Confidence 44 3666877632 2499977 33331111 1011 0110 14456678999887666655444445567899
Q ss_pred CCCCCCccceeEeeCCCceecCCCCCCCcCccCCeeE-EecCCCeEEEEEeeecCCeeEEEEEEeCCC-CCcEEecc
Q 005279 225 ADPSDPLLIKWVKYPGNPVLVPPPGIGAKDFRDPTTA-WLTSEGKWRIAIGSRINRTGITFVYDTKDF-INYELLRG 299 (704)
Q Consensus 225 ~D~~D~~l~~W~K~~~nPVl~~p~g~~~~~fRDP~Vv-w~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl-~~W~~~~~ 299 (704)
+|.+ +|+-.. +....+.+||.|+ | ++|+-.|+.... .|.-.+|+|.|. ..|+..-.
T Consensus 294 ~d~g-----~W~ls~---------g~s~~gC~~P~I~EW--e~gkLlM~t~C~---dG~RrVYES~DmG~tWtEAlG 351 (780)
T PTZ00334 294 SATE-----SGNLSK---------GMSADGCSDPSVVEW--KEGKLMMMTACD---DGRRRVYESGDKGDSWTEALG 351 (780)
T ss_pred cCCC-----CeEEcC---------CCCCCCCCCCEEEEE--cCCeEEEEEEeC---CCCEEEEEECCCCCChhhCCC
Confidence 8863 485322 2233457999977 6 357777765433 255568999885 67986433
No 83
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=69.02 E-value=1.1e+02 Score=33.59 Aligned_cols=157 Identities=20% Similarity=0.190 Sum_probs=86.7
Q ss_pred CCCcceEECCEEEEEEeeCCC-CC---CCCCcEEEEEEeCC-CcceeecccccccCCCCCCCcE------EeeeEEEecC
Q 005279 133 DPNGPVFYKGWYHLFYQYNPN-GA---IWGDIVWGHAVSKD-LIHWYHLPLAMVADQWYDIMGV------WTGSATILPD 201 (704)
Q Consensus 133 DPNG~~y~~G~YHLFYQ~nP~-~~---~wG~~~WGHAvS~D-LvhW~~lp~AL~Pd~~yD~~Gv------~SGSavv~~d 201 (704)
=|.+.+-.+|+-+|.|+..-. +. .|..-.=+.+.|.| .-+|+..|..+.+....- .|+ |.=++....|
T Consensus 96 iPt~~I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G~tW~~~~~~~~~~~~~~-~g~~~~~~~fq~~a~~~~d 174 (316)
T PF13810_consen 96 IPTDGISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNGETWTVVPGTIRPNSPFH-PGFNQGNWNFQMAAFVKDD 174 (316)
T ss_pred cccceEEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCCCCceeCCCccccccccc-CCccccccccccccccCCC
Confidence 377888889998888876421 11 13222336899999 789999996666554111 111 2222333456
Q ss_pred CcEEEEEecccCCceeeEEEEEeC-C-CCCC--------ccceeEeeCC--CceecCCCCCCCcCccCCeeEEecCCCeE
Q 005279 202 GKLMMLYTGSTNESVQVQNLAYPA-D-PSDP--------LLIKWVKYPG--NPVLVPPPGIGAKDFRDPTTAWLTSEGKW 269 (704)
Q Consensus 202 G~~~~~YTG~~~~~~q~q~lA~S~-D-~~D~--------~l~~W~K~~~--nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w 269 (704)
|-+|+|=|...+.+ ...||.-. + -.|+ .-..|.+-.. .||+..+- ---.|.|.+..|+|
T Consensus 175 gyVYv~gt~~~R~g--~~~LaRV~~~~i~d~~ayeyw~g~~~~W~~~~~~atpv~~~~v-------gElSv~~~~~~gk~ 245 (316)
T PF13810_consen 175 GYVYVYGTPFGRNG--GVYLARVPPDDILDRSAYEYWDGSGGGWSWGNPPATPVLPGPV-------GELSVRYNEYLGKW 245 (316)
T ss_pred CEEEEEeCCCCCCC--cEEEEEeCHHHCCChhhccccCCCCcccccCCCCccccccCCc-------cceEEEEeCCCCEE
Confidence 76666666544322 22344321 1 1111 0012554321 35654331 22456787789999
Q ss_pred EEEEeeecCCeeEEEEEEeCCCC-CcEEeccee
Q 005279 270 RIAIGSRINRTGITFVYDTKDFI-NYELLRGVL 301 (704)
Q Consensus 270 ~Mv~Gs~~~~~G~~llY~S~Dl~-~W~~~~~l~ 301 (704)
+|+..-. ..+.|.+.++++.. .|.....+.
T Consensus 246 Vl~~~~~--~~~~I~~RtA~~P~GpWs~~~~l~ 276 (316)
T PF13810_consen 246 VLSYFDA--GTGGIVLRTAPSPTGPWSEPKPLV 276 (316)
T ss_pred EEEEecc--cCCcEEEEecCCCCCCCCCCeeEE
Confidence 9998643 23567778888776 577544443
No 84
>PF13810 DUF4185: Domain of unknown function (DUF4185)
Probab=64.90 E-value=27 Score=38.23 Aligned_cols=96 Identities=20% Similarity=0.372 Sum_probs=55.5
Q ss_pred EecCCcEEEEEecccCCc-------eeeEEEEEeCCCCCCccceeEeeCCCceecCC---CCCCCcCccCCeeEEecCCC
Q 005279 198 ILPDGKLMMLYTGSTNES-------VQVQNLAYPADPSDPLLIKWVKYPGNPVLVPP---PGIGAKDFRDPTTAWLTSEG 267 (704)
Q Consensus 198 v~~dG~~~~~YTG~~~~~-------~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p---~g~~~~~fRDP~Vvw~~~~g 267 (704)
|..+|+.||.|.....-. ...-.||+|.|.+ .+|++.+ ..+-.+. ++............+ ..++
T Consensus 101 I~v~~~~Yl~~msv~~wg~~~G~W~tn~S~i~~S~D~G----~tW~~~~-~~~~~~~~~~~g~~~~~~~fq~~a~-~~~d 174 (316)
T PF13810_consen 101 ISVGGRQYLHYMSVRNWGNVPGSWTTNYSGIAYSDDNG----ETWTVVP-GTIRPNSPFHPGFNQGNWNFQMAAF-VKDD 174 (316)
T ss_pred EEECCcEEEEEEEEccCCCCCCccccCceEEEEeCCCC----CCceeCC-CcccccccccCCccccccccccccc-cCCC
Confidence 456899999999875311 1246799999976 8999974 2222221 121110011122122 2345
Q ss_pred eEEEEEeeecCCeeEEEEEEe-----CCCCCcEEecc
Q 005279 268 KWRIAIGSRINRTGITFVYDT-----KDFINYELLRG 299 (704)
Q Consensus 268 ~w~Mv~Gs~~~~~G~~llY~S-----~Dl~~W~~~~~ 299 (704)
.|+-++|...++.|.+.|++- .|+..|++-..
T Consensus 175 gyVYv~gt~~~R~g~~~LaRV~~~~i~d~~ayeyw~g 211 (316)
T PF13810_consen 175 GYVYVYGTPFGRNGGVYLARVPPDDILDRSAYEYWDG 211 (316)
T ss_pred CEEEEEeCCCCCCCcEEEEEeCHHHCCChhhccccCC
Confidence 577777876555677778875 36667776544
No 85
>COG3507 XynB Beta-xylosidase [Carbohydrate transport and metabolism]
Probab=56.25 E-value=10 Score=44.15 Aligned_cols=53 Identities=23% Similarity=0.259 Sum_probs=37.2
Q ss_pred CCceecCCCCCCCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEEeCCCCCcEEecceec
Q 005279 240 GNPVLVPPPGIGAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYDTKDFINYELLRGVLH 302 (704)
Q Consensus 240 ~nPVl~~p~g~~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~S~Dl~~W~~~~~l~~ 302 (704)
.|||+.. ..-||.++. ....|||..++ -+..+-+.++.|.||+||++....+.
T Consensus 22 ~NPvl~g-------f~PDpSi~r--vg~dyYia~st-F~~fpGl~i~hS~DL~nW~~v~tpl~ 74 (549)
T COG3507 22 LNPVLAG-------FNPDPSIVR--VGDDYYIATST-FEWFPGLAIHHSRDLVNWTLVSTPLI 74 (549)
T ss_pred cCccccc-------cCCCCceEe--cCCceEEEcce-EEEcCceeeeccccccCcEEeccccc
Confidence 3888752 125999764 45578888763 24444488999999999999887543
No 86
>PF02435 Glyco_hydro_68: Levansucrase/Invertase; InterPro: IPR003469 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This family consists of the glycosyl hydrolase 68 family (GH68 from CAZY), including several bacterial levansucrase enzymes, and invertase from Zymomonas. Levansucrase (2.4.1.10 from EC), also known as beta-D-fructofuranosyl transferase, catalyses the conversion of sucrose and (2,6-beta-D-fructosyl)(N) to glucose and (2,6-beta-D-fructosyl)(N+1), where other sugars can also act as fructosyl acceptors. Invertase, or extracellular sucrase (3.2.1.26 from EC), catalyses the hydrolysis of terminal non-reducing beta-D-fructofuranoside residues in beta-D-fructofuranosides.; GO: 0050053 levansucrase activity, 0009758 carbohydrate utilization; PDB: 2YFR_A 2YFT_A 2YFS_A 1W18_A 3OM7_B 3OM4_C 3OM6_D 3OM5_A 3OM2_A 1PT2_A ....
Probab=34.05 E-value=7.9e+02 Score=28.37 Aligned_cols=128 Identities=16% Similarity=0.187 Sum_probs=79.3
Q ss_pred CCEEEEEEeeCCCCCCC-C-----CcEEEEEEeCC----CcceeecccccccCCCCCC-------CcEEeeeEEEe-cCC
Q 005279 141 KGWYHLFYQYNPNGAIW-G-----DIVWGHAVSKD----LIHWYHLPLAMVADQWYDI-------MGVWTGSATIL-PDG 202 (704)
Q Consensus 141 ~G~YHLFYQ~nP~~~~w-G-----~~~WGHAvS~D----LvhW~~lp~AL~Pd~~yD~-------~Gv~SGSavv~-~dG 202 (704)
+|.-.|||--.-.+..- . -..-|++...| +-.|+.+-+.+.||..+-+ ...=.+..+.+ .+|
T Consensus 143 dg~I~LfYTav~~~~~~~~~Q~l~t~~~g~~~~d~~~v~i~g~~~~~~lfe~DG~~Yqt~~Q~~~~afRDP~~f~DP~~G 222 (428)
T PF02435_consen 143 DGSIQLFYTAVGFSDTPTFRQRLATATLGLIHADDDGVWITGFSNHHELFEGDGKHYQTYEQNPGYAFRDPHVFEDPEDG 222 (428)
T ss_dssp TSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEECSTEEEEEEEEEEEEEES--SSSB--HHHHHH---EEEEEEEETTTT
T ss_pred CCeEEEEEeecccCCCcchhhhhhhHhcCeeecCCCceeEccccceeEeeccchhhhhChhhcCCccccCCeeEECCCCC
Confidence 69999999873321110 1 14457777777 5568877777888874322 12336677666 489
Q ss_pred cEEEEEecccCC--------------------------------ceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCC
Q 005279 203 KLMMLYTGSTNE--------------------------------SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGI 250 (704)
Q Consensus 203 ~~~~~YTG~~~~--------------------------------~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~ 250 (704)
+.||+|.|++.. ..-.++||...+.. +..|+-+ .|+|... ++
T Consensus 223 ~~YLvFEgNtg~~~~~~~~g~~d~~~~~~~~~~~~~~~~~~A~~~ng~iGi~~~~~~~---~~~w~~~--~PL~~a~-~v 296 (428)
T PF02435_consen 223 KRYLVFEGNTGGERNWANYGGDDLGNVPGDPKLENNDNKSGASYANGAIGIAKLTNDD---GTVWELL--PPLLSAN-GV 296 (428)
T ss_dssp EEEEEEEEEBSTTSBGGGT-SHHHHHHHHHHHHHHSCCHHHHHH-EEEEEEEEESTTT---TSEEEEE--EEEEEET-TT
T ss_pred cEEEEEecccCCCCCccccCccccccccccccccccccccccceecceeeeEEecCCC---CCccEEe--Ccceecc-cc
Confidence 999999998621 02457889887642 3678887 5888742 11
Q ss_pred CCcCccCCeeEEecCCCeEEEEEeeec
Q 005279 251 GAKDFRDPTTAWLTSEGKWRIAIGSRI 277 (704)
Q Consensus 251 ~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~ 277 (704)
....-=|.||. .+|+||++..++.
T Consensus 297 -~de~ERP~iv~--~~gkyYLFt~s~~ 320 (428)
T PF02435_consen 297 -NDELERPHIVF--MNGKYYLFTISHL 320 (428)
T ss_dssp -BS-EEEEEEEE--ETTEEEEEEEEEG
T ss_pred -cccccCCcEEE--ECCEEEEEEEecc
Confidence 11223488765 6899999988875
No 87
>PF03664 Glyco_hydro_62: Glycosyl hydrolase family 62 ; InterPro: IPR005193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha -L-arabinofuranosidases (3.2.1.55 from EC) which are all members of glycoside hydrolase family 62 (GH62 from CAZY). This enzyme hydrolyzed aryl alpha-L-arabinofuranosides and cleaves arabinosyl side chains from arabinoxylan and arabinan.; GO: 0046556 alpha-N-arabinofuranosidase activity, 0046373 L-arabinose metabolic process
Probab=32.94 E-value=3.8e+02 Score=28.76 Aligned_cols=113 Identities=10% Similarity=0.189 Sum_probs=63.4
Q ss_pred cceeecccccccCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEeeCCCceecCCCCC
Q 005279 171 IHWYHLPLAMVADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKYPGNPVLVPPPGI 250 (704)
Q Consensus 171 vhW~~lp~AL~Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~p~g~ 250 (704)
..|+.-++.+.|...+ -++=..++| ..+|++++|.|...... ....+++.. ..+|..-..-+--. +
T Consensus 7 ~~WtStg~L~~Pk~g~--~slKD~T~V-~ynGk~~VyAtt~d~~~-~y~sm~f~~------Ftdws~~~sA~q~~----m 72 (271)
T PF03664_consen 7 YRWTSTGPLAQPKSGW--VSLKDFTIV-PYNGKHHVYATTADTGG-GYGSMNFGP------FTDWSQMASASQNY----M 72 (271)
T ss_pred ceeccCCccccCCCCc--eeccCceEE-eECCEEEEEEEeccCCC-ccceEeeec------cCCHHHhhcccccc----C
Confidence 4577766666676522 233345554 47999999999874322 223344432 13454432211111 1
Q ss_pred CCcCccCCeeEEecCCCeEEEEEeeecCCeeEEEEEE-eCCCC---CcEEecceec
Q 005279 251 GAKDFRDPTTAWLTSEGKWRIAIGSRINRTGITFVYD-TKDFI---NYELLRGVLH 302 (704)
Q Consensus 251 ~~~~fRDP~Vvw~~~~g~w~Mv~Gs~~~~~G~~llY~-S~Dl~---~W~~~~~l~~ 302 (704)
....-=|.|+++++.+.|||++--+ +...-|+ |+|.. .|.-..+|+.
T Consensus 73 -~~~~vAP~vFYFaPk~~W~L~yQwg----~~~fsY~Ts~DptnpngWSapq~lf~ 123 (271)
T PF03664_consen 73 -DQSAVAPQVFYFAPKNIWYLAYQWG----PAAFSYSTSSDPTNPNGWSAPQPLFS 123 (271)
T ss_pred -CcccccceEEEecCCcEEEEEEecC----CCcceeecCCCCCCCccCCCCccccc
Confidence 1123469988889999999998422 2344575 45544 4776666653
No 88
>COG1621 SacC Beta-fructosidases (levanase/invertase) [Carbohydrate transport and metabolism]
Probab=28.37 E-value=4.5e+02 Score=30.76 Aligned_cols=119 Identities=18% Similarity=0.208 Sum_probs=68.2
Q ss_pred CCcccccccccceeecCCCCccCCCc-----ceEECCEEEEEEeeCCCCCCCCCc-EEEEEEeCCCcceeec--cccc-c
Q 005279 111 TNNMLSWQRTAFHFQPQKNWMNDPNG-----PVFYKGWYHLFYQYNPNGAIWGDI-VWGHAVSKDLIHWYHL--PLAM-V 181 (704)
Q Consensus 111 ~~~~~~w~Rp~~Hf~P~~gWmNDPNG-----~~y~~G~YHLFYQ~nP~~~~wG~~-~WGHAvS~DLvhW~~l--p~AL-~ 181 (704)
+..++.|+.--.=+.|..-. |=+| .|-++|.--+||-.|-....+.+. .=.-|.|+|.++++.. ++.+ .
T Consensus 77 S~Dlv~W~~~piaL~Pd~~~--d~~g~ySGSAV~~~~~l~lfytg~v~~~~~~r~~~Q~iA~s~dg~~f~K~~~~~i~~~ 154 (486)
T COG1621 77 SKDLVHWEHLPIALAPDDDY--DSHGCYSGSAVVDDGNLSLFYTGNVRDSNGIRQQTQCIAYSEDGGTFEKYSGNPIIDQ 154 (486)
T ss_pred cCCcccceECCceecCCCcc--ccCCceeeeEEEeCCcEEEEEccceeccCCcceeEEEEEEEcCCCceEeccCCceecC
Confidence 34566775544555554432 4444 244688888999887765555544 5577999999999983 2322 2
Q ss_pred cCCCCCCCcEEeeeEEEecCCcEEEEEecccCCceeeEEEEEeCCCCCCccceeEee
Q 005279 182 ADQWYDIMGVWTGSATILPDGKLMMLYTGSTNESVQVQNLAYPADPSDPLLIKWVKY 238 (704)
Q Consensus 182 Pd~~yD~~Gv~SGSavv~~dG~~~~~YTG~~~~~~q~q~lA~S~D~~D~~l~~W~K~ 238 (704)
|+. | .......=++...+|+.+|+--+...+..-.+.+=.|.| |++|+..
T Consensus 155 p~~-~-t~hFRDPKv~w~~~~~~~~mlgAq~~~~~g~i~lY~S~D-----L~~W~~~ 204 (486)
T COG1621 155 PEG-Y-TPHFRDPKVVWDEGGKWWMMLGAQGEDLKGTILLYESDD-----LKNWQFT 204 (486)
T ss_pred CCc-c-cccCCCCcccccCCCcEEEEEEEecCCCCceEEEEeCCC-----ccCcEEE
Confidence 332 1 112233444456678877775544333222233434444 6999986
No 89
>PF10898 DUF2716: Protein of unknown function (DUF2716); InterPro: IPR020323 This entry represents a group of uncharacterised proteins.
Probab=26.66 E-value=42 Score=32.74 Aligned_cols=37 Identities=30% Similarity=0.624 Sum_probs=27.7
Q ss_pred ccccccccceeecCCCCccCC----CcceEECCEEEEEEee
Q 005279 114 MLSWQRTAFHFQPQKNWMNDP----NGPVFYKGWYHLFYQY 150 (704)
Q Consensus 114 ~~~w~Rp~~Hf~P~~gWmNDP----NG~~y~~G~YHLFYQ~ 150 (704)
-|+||-+-|-|.|..---.|+ .-++|=+|-||+|.+-
T Consensus 80 aLDWQH~cy~~~P~~~~~~~e~~~W~vpv~PdGDYyfF~~~ 120 (143)
T PF10898_consen 80 ALDWQHECYWFNPHRHAEKDEFGEWPVPVYPDGDYYFFIDK 120 (143)
T ss_pred EEecCCCCEEEChhhccccccCCCccccccCCCCeEEEEec
Confidence 358999999999876554443 2367779999999874
No 90
>PF06439 DUF1080: Domain of Unknown Function (DUF1080); InterPro: IPR010496 This is a family of proteins of unknown function.; PDB: 3IMM_B 3NMB_A 3S5Q_A 3OSD_A 3HBK_A 3H3L_A 3U1X_A.
Probab=20.99 E-value=4.6e+02 Score=25.21 Aligned_cols=53 Identities=11% Similarity=0.107 Sum_probs=33.1
Q ss_pred EEEEEEEeCCeEEEEEeCCeeEEEEeeecCcccC--CccEEEEEeCCCCcEEEEEEEE
Q 005279 595 VYVYLQVDHSIVEGFAQGGRTTITSRVYPTKAIY--GAARVFLFNNATGASVTSSLKA 650 (704)
Q Consensus 595 l~LrI~VD~SivEvF~n~Gr~v~TsRvYP~~~~~--~~~~v~lf~~~~~~~v~~sl~i 650 (704)
.+++|.+..+.|.+|+| |+.+++..- +..... ..-.|-|...++.+.++ +|+|
T Consensus 130 ~~~~I~~~g~~i~v~vn-G~~v~~~~d-~~~~~~~~~~G~Igl~~~~~~~~fr-Ni~I 184 (185)
T PF06439_consen 130 NTVRIVVKGNRITVWVN-GKPVADFTD-PSFPYSNPTKGPIGLQTHGSEVQFR-NIKI 184 (185)
T ss_dssp EEEEEEEETTEEEEEET-TEEEEEEET-TSHHHHHHSSBEEEEECSSSTEEEE-EEEE
T ss_pred EEEEEEEECCEEEEEEC-CEEEEEEEc-CCCCCCCCCceEEEEEeCCCeEEEE-EEEE
Confidence 68999999999999999 666666554 322100 23355666655554443 5554
No 91
>KOG0228 consensus Beta-fructofuranosidase (invertase) [Carbohydrate transport and metabolism]
Probab=20.75 E-value=3.3e+02 Score=32.07 Aligned_cols=40 Identities=30% Similarity=0.530 Sum_probs=28.8
Q ss_pred cCCcEEEEEecccCC---ceeeEEEEEeCCCCCCccceeEeeCCCceecC
Q 005279 200 PDGKLMMLYTGSTNE---SVQVQNLAYPADPSDPLLIKWVKYPGNPVLVP 246 (704)
Q Consensus 200 ~dG~~~~~YTG~~~~---~~q~q~lA~S~D~~D~~l~~W~K~~~nPVl~~ 246 (704)
.+|.++|||-=+-+. +..+=+.|+|+| |++|+.++ |-|.|
T Consensus 68 ykG~yHLFyQyNP~gavwg~ivWGHavSkD-----LinW~~lp--~Ai~P 110 (571)
T KOG0228|consen 68 YKGKYHLFYQYNPKGAVWGNIVWGHAVSKD-----LINWEALP--PAIAP 110 (571)
T ss_pred cCcEEEEEEecCCCCceeeeeEeeeecchh-----hccccccC--cccCC
Confidence 588999999865443 235557899999 59999873 55544
Done!