Your job contains 1 sequence.
>005288
MARGSIVSAQSRTTSTLLSTLVARLSLSSVKCRIPFTRSQYLPSIRLFCKCSHAHAVEYL
TDMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFI
DGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRY
RLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHD
DLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSF
KSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLA
LVLQFICQRQRPVRGSTSKLLLHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSIDG
PLPSKLELFQIHSDGEQRHCVTDVEQILEDAKSYSNHLIQDASDKLLLSMISDSVPTEAK
RFNMLSESTYKNILLLQREEIKRFKLDSEVTSDSQLMHAVECVGTYPSIPLQPGQVCYFM
NRFFVTWKLIKENGSRAFPREVHNDGGLGEDSWNEYCSSCLVGDEMVAELRHMIESDWLY
LAKLSKGLSSGNLPLERVFIDEKTGQKVEKTNLCADYGRLSAKRAILSLKSIPVAARRSL
PVLVSSHGQLLSIPSINFNICPCLMVSAVFKPKVPLGGGHRSFL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005288
(704 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091732 - symbol:RSY3 "RASPBERRY 3" species:37... 1538 1.1e-185 3
TIGR_CMR|APH_1180 - symbol:APH_1180 "tRNA(Ile)-lysidine s... 312 1.2e-25 1
TIGR_CMR|ECH_1097 - symbol:ECH_1097 "tRNA(Ile)-lysidine s... 264 5.7e-20 1
TIGR_CMR|SPO_3106 - symbol:SPO_3106 "tRNA(Ile)-lysidine s... 261 1.0e-19 1
CGD|CAL0005328 - symbol:orf19.2137 species:5476 "Candida ... 266 1.9e-19 2
POMBASE|SPAC12B10.08c - symbol:SPAC12B10.08c "mitochondri... 223 1.3e-16 2
DICTYBASE|DDB_G0293548 - symbol:DDB_G0293548 species:4468... 225 1.4e-15 2
TIGR_CMR|BA_0062 - symbol:BA_0062 "tRNA(Ile)-lysidine syn... 220 5.0e-15 2
ASPGD|ASPL0000061527 - symbol:AN0114 species:162425 "Emer... 160 8.3e-12 2
TIGR_CMR|VC_2242 - symbol:VC_2242 "tRNA(Ile)-lysidine syn... 191 9.7e-12 1
TIGR_CMR|CJE_1626 - symbol:CJE_1626 "tRNA(Ile)-lysidine s... 175 2.3e-10 1
TIGR_CMR|CHY_0213 - symbol:CHY_0213 "tRNA(Ile)-lysidine s... 155 3.8e-10 2
TIGR_CMR|DET_1421 - symbol:DET_1421 "tRNA(Ile)-lysidine s... 176 5.1e-10 1
TIGR_CMR|CBU_1509 - symbol:CBU_1509 "tRNA(Ile)-lysidine s... 167 4.5e-09 1
UNIPROTKB|Q48F76 - symbol:tilS "tRNA(Ile)-lysidine syntha... 165 1.4e-08 2
UNIPROTKB|P67151 - symbol:tilS "tRNA(Ile)-lysidine syntha... 121 1.5e-08 3
UNIPROTKB|Q4KHF9 - symbol:tilS "tRNA(Ile)-lysidine syntha... 162 1.5e-08 1
TIGR_CMR|GSU_1810 - symbol:GSU_1810 "tRNA(Ile)-lysidine s... 155 1.0e-07 1
UNIPROTKB|Q886M6 - symbol:tilS "tRNA(Ile)-lysidine syntha... 148 5.4e-07 1
TIGR_CMR|SO_1645 - symbol:SO_1645 "tRNA(Ile)-lysidine syn... 144 1.6e-06 1
UNIPROTKB|Q2GJ10 - symbol:APH_1056 "Putative cell cycle p... 139 1.6e-06 1
TIGR_CMR|APH_1056 - symbol:APH_1056 "putative cell cycle ... 139 1.6e-06 1
TIGR_CMR|APH_1093 - symbol:APH_1093 "putative cell cycle ... 139 1.6e-06 1
UNIPROTKB|P52097 - symbol:tilS species:83333 "Escherichia... 142 2.3e-06 1
>TAIR|locus:2091732 [details] [associations]
symbol:RSY3 "RASPBERRY 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;ISS] [GO:0016879 "ligase
activity, forming carbon-nitrogen bonds" evidence=IEA] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP] [GO:0010098
"suspensor development" evidence=IMP] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 Pfam:PF01171 GO:GO:0005524
GO:GO:0009507 EMBL:CP002686 GO:GO:0009658 GO:GO:0009793
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879
InterPro:IPR011063 GO:GO:0010098 TIGRFAMs:TIGR02432 IPI:IPI00524720
RefSeq:NP_974357.1 UniGene:At.48701 UniGene:At.6252
ProteinModelPortal:F4J7P7 SMR:F4J7P7 PRIDE:F4J7P7
EnsemblPlants:AT3G24560.2 GeneID:822052 KEGG:ath:AT3G24560
OMA:GIRCEIA Uniprot:F4J7P7
Length = 660
Score = 1538 (546.5 bits), Expect = 1.1e-185, Sum P(3) = 1.1e-185
Identities = 317/519 (61%), Positives = 380/519 (73%)
Query: 32 CRIPFTRSQYLPSIRLFCKCSHAHAVEYLTDMTKYREAFSRRMAMAGLKPHHRIALGVSG 91
C P S RLFC +HA V D T+Y+E F++RM MAGLKPH+RIALGVSG
Sbjct: 37 CSYPLQSRHPKFSQRLFC--NHA-CVPETVDETRYKELFNKRMDMAGLKPHNRIALGVSG 93
Query: 92 GPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHRVSDMG 151
GPDSMALCVLTA WKT G + + FIDGL+AI VDHGLR+ESK+EA +V RVS MG
Sbjct: 94 GPDSMALCVLTAKWKTEGLSCVNKTDGFIDGLVAIVVDHGLRQESKDEAELVCSRVSQMG 153
Query: 152 IRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFILR 211
IRCEI CDW+DGRPK GHLQEAAR+MRY + VC + QI VLLIAHHADDQAELFILR
Sbjct: 154 IRCEIASCDWVDGRPKLGHLQEAAREMRYEMISNVCFRQQIEVLLIAHHADDQAELFILR 213
Query: 212 LSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRD 271
LSR+SGVLGLAG AF+S+IFS +KN SI LVRPLLD K+DMYKICQ G +D
Sbjct: 214 LSRSSGVLGLAGTAFASEIFSRNLQLDAKHMKNQSIRLVRPLLDLWKEDMYKICQWGRQD 273
Query: 272 WVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVT 331
WVEDPTNRS LFVRNRIR S+G+L S SFKSELQAVIS CRRTRS+V+ VC++LI++ VT
Sbjct: 274 WVEDPTNRSQLFVRNRIRTSIGNLESGSFKSELQAVISECRRTRSFVDKVCTDLIHQTVT 333
Query: 332 VMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHYIRTFPCK 391
V D+GYA++DLE LNPS ++DI LSK+L VLQFI QRQRP+RG+TSKLLL+YIR PC+
Sbjct: 334 VTDKGYAILDLERLNPSGVKDICLSKYLFAVLQFISQRQRPIRGNTSKLLLNYIRAIPCR 393
Query: 392 TSLTAAGCYLCPTPGSRGTKALVCSSIDGPLPSKLELFQIHSDGEQRHCVTDVEQILEDA 451
TSLTAAGCYL P PGS+GTK +V S+D PLPSK EL I S E D+ QI+ DA
Sbjct: 394 TSLTAAGCYLSPAPGSKGTKIIVSCSVDCPLPSKTELLNI-SFNETPS--DDLGQIIADA 450
Query: 452 KSYSNHLIQDASDKL-LLSMISDSVPTEAKRFNMLSESTYKNILLLQREEIKRFKLDSEV 510
KS+S+H+ + ++ L + S+SV ++A+ N+LSESTY I LLQR+E KRF +E
Sbjct: 451 KSFSDHVAPTSLFEVQFLDVASESVLSKARELNLLSESTYTTIGLLQRDETKRFLTKTEE 510
Query: 511 TSDSQLMHAVECVGTYPSIPLQPGQVCYFMNRFFVTWKL 549
S +L H + + L GQ YFMNRF + W L
Sbjct: 511 KS-VELEHGTNIAASSDKVHLCLGQNLYFMNRFLIRWNL 548
Score = 203 (76.5 bits), Expect = 1.1e-185, Sum P(3) = 1.1e-185
Identities = 40/64 (62%), Positives = 50/64 (78%)
Query: 641 SAKRAILSLKSIPVAARRSLPVLVSSHGQLLSIPSINFNICPCLMVSAVFKPKVPLGGGH 700
S+++A+ SLK IP AAR+SLPVLV+ G LL IP+I F+ C CL SAVF P++PLGGGH
Sbjct: 597 SSQKALRSLKLIPAAARKSLPVLVNHCGLLLCIPAIGFSYCSCLEASAVFLPRIPLGGGH 656
Query: 701 RSFL 704
SFL
Sbjct: 657 SSFL 660
Score = 98 (39.6 bits), Expect = 1.1e-185, Sum P(3) = 1.1e-185
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 568 LGEDSWNEY-CSSCLVGDEMVAELRHMIESDWLYLAKLSKGLSSGN 612
L + NE C +C V E+RHM+E DWLYLA+LSK S+ N
Sbjct: 548 LSDHQCNEADCRNCPVSTATSMEVRHMVEPDWLYLAELSK-CSTSN 592
>TIGR_CMR|APH_1180 [details] [associations]
symbol:APH_1180 "tRNA(Ile)-lysidine synthetase"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02432 HOGENOM:HOG000063389 RefSeq:YP_505718.1
ProteinModelPortal:Q2GIT3 STRING:Q2GIT3 GeneID:3930466
KEGG:aph:APH_1180 PATRIC:20951140 OMA:NIQIIRP
ProtClustDB:CLSK747400 BioCyc:APHA212042:GHPM-1186-MONOMER
Uniprot:Q2GIT3
Length = 447
Score = 312 (114.9 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 96/344 (27%), Positives = 160/344 (46%)
Query: 76 MAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREE 135
M + P+ + A+ VSGG DSM L L A F+++ + + +TV+HG R E
Sbjct: 1 MRDIVPNAQYAVAVSGGVDSMTLMRLVAL-----FHKSSAS---VGSPTILTVNHGFRPE 52
Query: 136 SKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVL 195
++ E + V + + +G+ C ++ W + P + Q AR++RY+L + C H + VL
Sbjct: 53 ARNEVSFVHKQATMLGLECHMLH--WEN--PIRKKSQVVARNIRYQLLLQWCSAHNVKVL 108
Query: 196 LIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLD 255
L AH +DQAE ++RL R SG+ GLAG+ S I + ++RPLLD
Sbjct: 109 LTAHTKNDQAETVLIRLERGSGIDGLAGIRERSVI--------------GDVTIIRPLLD 154
Query: 256 FSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFK-SELQAVISACRRT 314
F++ ++ + + W+EDP+N P + R R + + S L + +R+
Sbjct: 155 FTRREIQEYAIQHQQPWIEDPSNSDPKYRRTFYRNFINNCKHPEILISRLSSTALHMQRS 214
Query: 315 RSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVR 374
S + H N ++ + GY VI ++ ++D S+ L++ I + R
Sbjct: 215 LSCILHYVQNALDSCLEFTPFGYVVIKHDVFR--NLQDEIASRLFLLLIMTIGNKPLKPR 272
Query: 375 GSTSKLLLHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSI 418
S L +R+ S T GC + T S A SSI
Sbjct: 273 FSKFSSALSKVRSTAGFASFTLHGCMILKTCDSNIIVAREVSSI 316
>TIGR_CMR|ECH_1097 [details] [associations]
symbol:ECH_1097 "tRNA(Ile)-lysidine synthetase"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0006400
"tRNA modification" evidence=ISS] [GO:0016879 "ligase activity,
forming carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02432 RefSeq:YP_507881.1 ProteinModelPortal:Q2GFA2
STRING:Q2GFA2 GeneID:3927774 KEGG:ech:ECH_1097 PATRIC:20577532
HOGENOM:HOG000063389 OMA:ARRTHIC ProtClustDB:CLSK749209
BioCyc:ECHA205920:GJNR-1100-MONOMER Uniprot:Q2GFA2
Length = 434
Score = 264 (98.0 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 86/315 (27%), Positives = 150/315 (47%)
Query: 86 ALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSH 145
A+ VSGG DSM L L+A + N+N + +TV+HGLR E+ +EA V
Sbjct: 20 AIAVSGGIDSMTLLHLSARY----CNKNTP--------IVLTVNHGLRPEAAQEALFVFQ 67
Query: 146 RVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQA 205
++ ++C I+ +W G+ + ++Q +AR +RY+L + C +++I L++AH +DQA
Sbjct: 68 HSQNLNLKCHIL--NW-HGKLPESNIQSSARRIRYKLLLQWCNENRIKYLMVAHQKNDQA 124
Query: 206 ELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKIC 265
E ++RL R SG+ GLAGM Y Y + I ++RPLL S+ ++ +
Sbjct: 125 ETIMIRLERGSGLDGLAGM-------QEYTYL-------NGICILRPLLSASRTELLQYA 170
Query: 266 QGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFK-SELQAVISACRRTRSYVEHVCSN 324
N W+ D +N + + R R L + + L +R+ + + H
Sbjct: 171 NKNNITWINDTSNNNKKYKRTLYRNMLEITDNPEVLINRLYTASEHIKRSLNCILHYVRL 230
Query: 325 LINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPVRGSTSKLLLHY 384
++ + + G+ I L+I E+I + + L + I Q++ R S +
Sbjct: 231 ATDQCLEFTNLGHINIKLDIFLTLP-EEISI-RLLTYSIMSIGQQKYKPRYSKLSNIFSK 288
Query: 385 IRTFPCKTSLTAAGC 399
I+ K + T GC
Sbjct: 289 IKNNKHKIAQTLCGC 303
>TIGR_CMR|SPO_3106 [details] [associations]
symbol:SPO_3106 "tRNA(Ile)-lysidine synthetase"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000236508 KO:K04075
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02432 RefSeq:YP_168309.1
ProteinModelPortal:Q5LNU7 GeneID:3194218 KEGG:sil:SPO3106
PATRIC:23379657 OMA:ETIAIRR ProtClustDB:CLSK934062 Uniprot:Q5LNU7
Length = 419
Score = 261 (96.9 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 84/268 (31%), Positives = 133/268 (49%)
Query: 75 AMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLRE 134
A +P R+ + VSGG DS+AL L A F + GE L TVDHGLR
Sbjct: 16 AQFSAQPPRRLGVAVSGGGDSVALMHLLARC----FPR-GEVK-----LCVATVDHGLRS 65
Query: 135 ESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGV 194
ES EA +V+ + + +G+ E + W G +G+LQ+ AR RY L +++++
Sbjct: 66 ESASEAALVARQAAGLGLPHETLL--WT-GWTGEGNLQDQARRARYGLLTDWALRNRVTT 122
Query: 195 LLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLL 254
+ +AH ADDQAE ++RL R++GV GLA MA D ++LVRPLL
Sbjct: 123 VALAHTADDQAETLLMRLGRSAGVSGLAAMA---------PRRMQD-----GVVLVRPLL 168
Query: 255 DFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVISA-CRR 313
++D + + W EDP+N + R + R +L L+ ++ A ++A R
Sbjct: 169 GITRDALRDFLRAEGIAWAEDPSNEDIRYDRIKARQALAGLAPMGIDAQRLAEVAANMAR 228
Query: 314 TRSYVEHVCSNLINEAVTVMDQGYAVID 341
R ++ + L +T +D G +++
Sbjct: 229 AREALDWY-TFLAARDLTRIDGGDVLLE 255
>CGD|CAL0005328 [details] [associations]
symbol:orf19.2137 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] HAMAP:MF_01161 InterPro:IPR012094
InterPro:IPR012795 CGD:CAL0005328 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063 EMBL:AACQ01000162
EMBL:AACQ01000158 PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02432
RefSeq:XP_712269.1 RefSeq:XP_712412.1 ProteinModelPortal:Q59RI2
GeneID:3645955 GeneID:3646123 KEGG:cal:CaO19.2137
KEGG:cal:CaO19.9684 Uniprot:Q59RI2
Length = 483
Score = 266 (98.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 78/217 (35%), Positives = 106/217 (48%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
++A+ +SGGPDSM L + K F + AIT+DH R ES EA V
Sbjct: 23 KVAVALSGGPDSMLLTWFLSQCK---FE-----------IYAITIDHKYRPESSREALSV 68
Query: 144 SHRVSDMGIRCEIVRCDWLDG-RP-KQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHA 201
RV + + I D+ G P K + +E AR RY +VC I VL + HH
Sbjct: 69 YERVKNWNLNHIIKSLDYPAGVDPTKLNNFEEIARGKRYEAMAQVCYDKDIPVLFLGHHR 128
Query: 202 DDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHS--ILLVRPLLDFSKD 259
DDQ E FI RL NS + GLAG S + S S L N + + ++RP D+ K
Sbjct: 129 DDQLETFIQRLQGNSSIFGLAGTHKVSPLPISKDLSPTSALFNQTSQVRILRPFWDYDKQ 188
Query: 260 DMYKICQGGNRDWVEDPTNRS-PLFVRNRIRMSLGDL 295
D+ + CQ N +V DPTN+ L RN +R + D+
Sbjct: 189 DILETCQLNNIAYVTDPTNKDVSLTRRNYLRHLINDI 225
Score = 38 (18.4 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 7/35 (20%), Positives = 21/35 (60%)
Query: 659 SLPVLVSSHGQLLSIPSINFNICPCLMVSAVFKPK 693
+LP + ++ G++++ P++ +C + ++PK
Sbjct: 442 TLPAIKANSGKIIAFPTLGA-MCSDYGIVYEWRPK 475
>POMBASE|SPAC12B10.08c [details] [associations]
symbol:SPAC12B10.08c "mitochondrial tRNA(Ile)-lysidine
synthetase family (predicted)" species:4896 "Schizosaccharomyces
pombe" [GO:0005524 "ATP binding" evidence=ISM] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0032267 "tRNA(Ile)-lysidine synthase activity"
evidence=ISS] [GO:0032543 "mitochondrial translation" evidence=IC]
InterPro:IPR012094 InterPro:IPR012795 PomBase:SPAC12B10.08c
Pfam:PF01171 GO:GO:0005739 GO:GO:0005524 EMBL:CU329670
GO:GO:0032543 GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02432 PIR:T37575
RefSeq:NP_594640.1 ProteinModelPortal:Q10441
EnsemblFungi:SPAC12B10.08c.1 GeneID:2543003 KEGG:spo:SPAC12B10.08c
OMA:CITHNIR OrthoDB:EOG4G7G6V NextBio:20804036 Uniprot:Q10441
Length = 456
Score = 223 (83.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 83/287 (28%), Positives = 129/287 (44%)
Query: 62 DMTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGW--KTGGFNQNGEAGEF 119
D K +E ++ +++ H R+ + VSGG DSM L W K G +F
Sbjct: 2 DTIKLKEFYNSLVSIRRRVGHRRLGIAVSGGVDSMLL-----SWFMKESQI-MFGWPNQF 55
Query: 120 IDGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDW-LDGRPKQGHLQEAARDM 178
I A VDH +R+ S EEA ++ M I + +W D +L+ AR+
Sbjct: 56 I----AFVVDHRIRKNSTEEALQTIWNLNRMLIPNVYLNINWGNDDVHSLTNLETIAREH 111
Query: 179 RYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNS-GVLG-LAGMAFSSQIFSSYAY 236
RY++ + CI H I + AHHA+DQAE +RL R G G L M SQI S +
Sbjct: 112 RYQVLTRACITHNIRHICTAHHANDQAETIFMRLLRRKPGTWGGLCAMKPVSQIPESDSI 171
Query: 237 SCHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRS-PLFVRNRIRMSLGDL 295
C +I L+RPLL + K+ + + W EDPTN L RN IR L
Sbjct: 172 -CGAS----NIELLRPLLPYYKNQILNTAKQHGIAWEEDPTNADINLTPRNAIRRFLNQH 226
Query: 296 SSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDL 342
++ + E + +A + + +++ ++ + + Q + L
Sbjct: 227 AALTV--EATKLATAFQSLQVNIDNKVDEILKDNIVSYHQPSGTLSL 271
Score = 57 (25.1 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 638 GRLSAKRAILSLKSIPVAARRSLPVLVSSHGQLLSIPSINFNICPCLMVSAVFKPKV 694
G LS + + +P R ++PVL + +L+ IP+ FN ++ + + K K+
Sbjct: 400 GFLSKEEFLKFCIQVPGHIRFTIPVLSEENDKLVGIPTFGFNFRSDIISNCLHKFKL 456
>DICTYBASE|DDB_G0293548 [details] [associations]
symbol:DDB_G0293548 species:44689 "Dictyostelium
discoideum" [GO:0016879 "ligase activity, forming carbon-nitrogen
bonds" evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01161 InterPro:IPR012094 InterPro:IPR012795
dictyBase:DDB_G0293548 Pfam:PF01171 GO:GO:0005524 GO:GO:0005737
GO:GO:0008033 Gene3D:3.40.50.620 InterPro:IPR014729
EMBL:AAFI02000218 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02432 RefSeq:XP_628998.1
ProteinModelPortal:Q54BN1 EnsemblProtists:DDB0191997 GeneID:8629282
KEGG:ddi:DDB_G0293548 InParanoid:Q54BN1 OMA:FTIFISE Uniprot:Q54BN1
Length = 665
Score = 225 (84.3 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 70/236 (29%), Positives = 116/236 (49%)
Query: 85 IALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEE----A 140
+ +GVSGG DSM L L W G + N + + IT+DH + E+ +
Sbjct: 173 LVIGVSGGSDSMVLLYLLKNWCIGENSAN--VNRKLK-ITVITIDHKMTNPVAEDIPYIS 229
Query: 141 NIVSHRVSD------MGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGV 194
I++ +++ + I+ ++V D + R KQ Q + R+ R + + + +
Sbjct: 230 KIINQLINNDNNSNFIKIKHKVVEID--EQRCKQ---QVSLRNQRIEILMSESVGNGNNL 284
Query: 195 LLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLL 254
+ + +DQ E FI R+++NSG+ GLA M ++I ++ HS+LLVRPLL
Sbjct: 285 IFYGTNLNDQMETFIQRINKNSGLDGLAAMTKITKISNT-----------HSVLLVRPLL 333
Query: 255 DFSKDDMYKICQGGNRDWVEDPTNRSPL-FVRNRIRMSLGDLSSCSFKSELQAVIS 309
DFSK ++ C + + DPTN P+ + RN+ R L D S +S L I+
Sbjct: 334 DFSKLEILDFCSERSIQYFNDPTNDDPVSYSRNKTRHQLRDFKEFSIESPLSTTIN 389
Score = 52 (23.4 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 458 LIQDASDKLLLSMISDSVPTEAKRFNMLSESTYKNILL-LQREEIKRFKLDSEVTSDSQL 516
+I+D +DK+L M++D + + N+ +++ L L R +K + T S+L
Sbjct: 402 MIKDQTDKVLQKMLNDILELNEHKNNI------RDLRLPLIRVPLKYYN-SLPPTIQSRL 454
Query: 517 MHAVECV 523
+H + C+
Sbjct: 455 LHRLSCI 461
Score = 44 (20.5 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 24/93 (25%), Positives = 41/93 (44%)
Query: 391 KTSLTAAGCYLCPTPGSRGTKALVCSSIDGP--LPSKLELFQIHSDGEQRHCVTDVEQIL 448
K+SL ++ + S + + SS+ LP KL + + + + H + +I+
Sbjct: 548 KSSLPSSSSSSSSSSSSSSSSSSSSSSLSSSQSLP-KL-IVRFYDQVDHVHFDRNQRKII 605
Query: 449 EDAKSYSNHL---IQDASDKLLLSMISDSVPTE 478
Y+ L I DASD L L + S V T+
Sbjct: 606 SSYPRYTKLLFLVIADASDNLPLCIPSIGVQTD 638
>TIGR_CMR|BA_0062 [details] [associations]
symbol:BA_0062 "tRNA(Ile)-lysidine synthetase"
species:198094 "Bacillus anthracis str. Ames" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037
RefSeq:NP_842631.1 RefSeq:YP_016665.1 RefSeq:YP_026349.1
ProteinModelPortal:Q81VX7 DNASU:1086418
EnsemblBacteria:EBBACT00000008642 EnsemblBacteria:EBBACT00000015007
EnsemblBacteria:EBBACT00000022501 GeneID:1086418 GeneID:2814409
GeneID:2851687 KEGG:ban:BA_0062 KEGG:bar:GBAA_0062 KEGG:bat:BAS0062
HOGENOM:HOG000236506 KO:K04075 OMA:NDISYPL ProtClustDB:CLSK886565
BioCyc:BANT260799:GJAJ-71-MONOMER BioCyc:BANT261594:GJ7F-73-MONOMER
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432
Uniprot:Q81VX7
Length = 476
Score = 220 (82.5 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 80/319 (25%), Positives = 139/319 (43%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
LK I +GVSGGPDS+AL + A +F ++ VDH R +ES
Sbjct: 19 LKERSTIVVGVSGGPDSLALLYYLL--------EKRAAKQF--EIVVAHVDHMFRGDESH 68
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLL 196
E+ V +G+ CE +R + + + G + Q AAR+ RY +++ ++ +
Sbjct: 69 EDLQFVQDLCKGLGVICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVA 128
Query: 197 IAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDF 256
+ HH DDQ E ++RL R S G AG+A + Y L+RPLL
Sbjct: 129 LGHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGY--------------LIRPLLGV 174
Query: 257 SKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMS-LGDLS--SCSFKSELQAVISACRR 313
+K+++ C DP+N+ ++ RNR+R L L + + Q +
Sbjct: 175 TKEEIVNYCNELKIIPRIDPSNKKEVYTRNRLRKYVLPHLKEENPQVHEKFQKFSMQMQE 234
Query: 314 TRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQFICQRQRPV 373
+Y++ + +N+ +T I L I + + + L+L ++ + + P
Sbjct: 235 DEAYLQELAFEKMNKVITKKSDKQ--ISLSIPTFESMSMPLQRRGIQLILNYLYEYKIPS 292
Query: 374 RGST---SKLLLHYIRTFP 389
S+ K++ + RT P
Sbjct: 293 SLSSIHIDKVIEFFKRTQP 311
Score = 46 (21.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
Identities = 19/92 (20%), Positives = 42/92 (45%)
Query: 583 GDEMVAELRHMIESDWLYLAKLSKGLSSGNLPLERVFIDEKTGQKVEKTNLCADYGRLSA 642
GD++V E+ I SD ++K + + P+ R+ ++ + ++ ++ G
Sbjct: 357 GDKLVTEVSEDIPSDMNETVFVAK-YNDISYPI-RI----RSRENGDRMSIQGMNGTKKI 410
Query: 643 KRAILSLKSIPVAARRSLPVLVSSHGQLLSIP 674
K + K +P R PV+ + G ++ +P
Sbjct: 411 KAIFIEAK-VPREKREEWPVVCDASGNIIWLP 441
>ASPGD|ASPL0000061527 [details] [associations]
symbol:AN0114 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] HAMAP:MF_01161 InterPro:IPR012094 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:BN001308 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 EMBL:AACD01000004
GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 OrthoDB:EOG4G7G6V RefSeq:XP_657718.1
ProteinModelPortal:Q5BH66 EnsemblFungi:CADANIAT00002635
GeneID:2875879 KEGG:ani:AN0114.2 HOGENOM:HOG000176090 OMA:ARIPECH
Uniprot:Q5BH66
Length = 609
Score = 160 (61.4 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 109 GFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQ 168
G + + + ++A VDH R ES +EAN V+ + ++GI EI+ DW G
Sbjct: 28 GLTNSNTSSKDEPSVIAFVVDHKARPESTDEANTVATWLRELGITTEILPLDWT-GIDHS 86
Query: 169 GHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMA 225
+ AR +R++ K C I LL+ HH DD E + RLS + GL G++
Sbjct: 87 A-FETQARRLRFQALGKACRDRGIDALLLGHHQDDNVETTLWRLSAGARGAGLTGIS 142
Score = 83 (34.3 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 25/63 (39%), Positives = 33/63 (52%)
Query: 247 ILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSP-LFVRNRIRMSLGDLSSCSFKSELQ 305
I++ RPLL F K + C +V DPTN P L RN IR SL L+S S + Q
Sbjct: 191 IIIHRPLLSFPKSRLLTTCHENGIPYVTDPTNFDPTLTPRNAIR-SL--LASNSLPRKCQ 247
Query: 306 AVI 308
++
Sbjct: 248 GLV 250
>TIGR_CMR|VC_2242 [details] [associations]
symbol:VC_2242 "tRNA(Ile)-lysidine synthetase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0016879 "ligase activity, forming carbon-nitrogen
bonds" evidence=ISS] HAMAP:MF_01161 InterPro:IPR012094
InterPro:IPR012795 InterPro:IPR012796 InterPro:IPR015262
Pfam:PF09179 Pfam:PF11734 SMART:SM00977 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432
OMA:KSAVGFF PIR:D82100 RefSeq:NP_231873.1 ProteinModelPortal:Q9KPX0
DNASU:2613164 GeneID:2613164 KEGG:vch:VC2242 PATRIC:20083529
ProtClustDB:CLSK874732 Uniprot:Q9KPX0
Length = 440
Score = 191 (72.3 bits), Expect = 9.7e-12, P = 9.7e-12
Identities = 75/256 (29%), Positives = 117/256 (45%)
Query: 81 PHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEA 140
P +I L +SGG DS L L A G EF + A+ V HGL + + A
Sbjct: 16 PFRKILLALSGGVDSQVLLALLA---------RGR-DEFGWDVTAVHVHHGLSPNADQWA 65
Query: 141 NIVSHRVSDMGIRCEI--VRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
++G+ C+I V+ D G +++ AR+ RYR+ + Q +LL+
Sbjct: 66 QYCQRCCREVGMACQIEYVQLDVASGES----IEKLAREARYRVLAPH-VNAQT-LLLLG 119
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSK 258
HADDQ E F+L L R SG GLA MA ++ +A + H L+RPLL S+
Sbjct: 120 QHADDQLETFLLALKRGSGPKGLAAMA----AYAPFA-------EGH---LLRPLLTVSR 165
Query: 259 DDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVI-SA--CRRTR 315
+ + WV D +N + RN +R + + + + S QAV SA C
Sbjct: 166 QHIEAYAKQHKLTWVIDESNADIRYERNFLRHQVTPVLTERWPSIRQAVQRSAELCAEQE 225
Query: 316 SYVEHVCSNLINEAVT 331
+ ++ + + +A+T
Sbjct: 226 ALLQEFLAEALKKAIT 241
>TIGR_CMR|CJE_1626 [details] [associations]
symbol:CJE_1626 "tRNA(Ile)-lysidine synthetase"
species:195099 "Campylobacter jejuni RM1221" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02432 RefSeq:YP_179607.1 ProteinModelPortal:Q5HSX8
STRING:Q5HSX8 GeneID:3232254 KEGG:cjr:CJE1626 PATRIC:20045049
HOGENOM:HOG000103796 OMA:RFEWFLM ProtClustDB:CLSK872424
BioCyc:CJEJ195099:GJC0-1656-MONOMER Uniprot:Q5HSX8
Length = 321
Score = 175 (66.7 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/145 (30%), Positives = 73/145 (50%)
Query: 166 PK-QGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGM 224
PK Q + ++ ARD RY F+K+C++ L++AHH +DQ E F+++LSR +G+ + GM
Sbjct: 77 PKFQSNFEKKARDFRYDFFEKICLEQDYDHLILAHHLNDQFEWFLMQLSRGAGLAEILGM 136
Query: 225 AFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFV 284
C K + L+RPLL SKD++ + + + D +N + +
Sbjct: 137 Q-----------ECE---KRQNYTLLRPLLFISKDEISSFLKEKDIFYFHDESNENEKYF 182
Query: 285 RNRIRMSLGDLSSCSFKSELQAVIS 309
RN IR + + F L+ S
Sbjct: 183 RNYIRKNFSNAFVSEFHQGLKRSFS 207
>TIGR_CMR|CHY_0213 [details] [associations]
symbol:CHY_0213 "tRNA(Ile)-lysidine synthetase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006400 "tRNA modification" evidence=ISS] [GO:0016879 "ligase
activity, forming carbon-nitrogen bonds" evidence=ISS]
HAMAP:MF_01161 InterPro:IPR012094 InterPro:IPR012795
InterPro:IPR012796 InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734
SMART:SM00977 Pfam:PF01171 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037
HOGENOM:HOG000236506 KO:K04075 TIGRFAMs:TIGR02433
TIGRFAMs:TIGR02432 RefSeq:YP_359085.1 ProteinModelPortal:Q3AFJ9
STRING:Q3AFJ9 GeneID:3726297 KEGG:chy:CHY_0213 PATRIC:21273607
OMA:RILRYEA BioCyc:CHYD246194:GJCN-214-MONOMER Uniprot:Q3AFJ9
Length = 449
Score = 155 (59.6 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLR-EESK 137
+ P ++ +GVSGGPDSMAL ++ E +F L + V+HGLR ES
Sbjct: 18 INPGEKVVVGVSGGPDSMALLFCLLKYR--------EEVDF--SLEVVHVNHGLRGRESD 67
Query: 138 EEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLI 197
+ +V GI + + D D + + +LQ AR RY F +V + + +
Sbjct: 68 LDEELVLDFTRKYGINFHVKKLD--DLKDLRENLQAVARQKRYEFFYEVLEKTGADKIAL 125
Query: 198 AHHADDQAELFILRLSRNSGVLGLAGM 224
AH A D AE ++ + R +G GL G+
Sbjct: 126 AHTASDVAETVMMNILRGAGTEGLCGI 152
Score = 68 (29.0 bits), Expect = 3.8e-10, Sum P(2) = 3.8e-10
Identities = 23/114 (20%), Positives = 51/114 (44%)
Query: 249 LVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFKSELQAVI 308
++RPL + ++ + N + D +N P ++RN++R+ L + F ++++ +
Sbjct: 159 IIRPLYTVFRREVMSFVERKNIPYRVDSSNLVPKYLRNKVRLKLFPFINEEFATDIEERL 218
Query: 309 SACRRTRSYVEHVCSNLIN---EAVTVMDQGYAVIDLEILNPSKIE-DIFLSKF 358
+ V N +N + V + Y + + + N S+ E + L KF
Sbjct: 219 FNLALIKQEENQVLDNYLNKLWQEAFVKEGQYLKVPV-LQNLSRAEAGLLLRKF 271
Score = 39 (18.8 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 362 VLQFICQRQRPVRGSTSKLLLHYIR 386
V+ F+ ++ P R +S L+ Y+R
Sbjct: 171 VMSFVERKNIPYRVDSSNLVPKYLR 195
>TIGR_CMR|DET_1421 [details] [associations]
symbol:DET_1421 "tRNA(Ile)-lysidine synthetase"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:CP000027
GenomeReviews:CP000027_GR GO:GO:0006400 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 HOGENOM:HOG000236506 KO:K04075
OMA:NDISYPL PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02433
TIGRFAMs:TIGR02432 RefSeq:YP_182129.1 ProteinModelPortal:Q3Z6M0
STRING:Q3Z6M0 GeneID:3229258 KEGG:det:DET1421 PATRIC:21609869
ProtClustDB:CLSK836894 BioCyc:DETH243164:GJNF-1422-MONOMER
Uniprot:Q3Z6M0
Length = 470
Score = 176 (67.0 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 78/292 (26%), Positives = 131/292 (44%)
Query: 68 EAFSRRMAMAGL-KPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAI 126
E SR + G+ I L VSGGPDS+ C+L K + E G F L
Sbjct: 3 ERVSRYIKQQGMVSDGDEILLAVSGGPDSV--CMLYIMHKL-----SCEMG-F--SLRLA 52
Query: 127 TVDHGLR-EESKEEANIVSHRVSDMGIR-CEIVRCDWLDGRPKQGHL--QEAARDMRYRL 182
++H LR EES+ +A V+ + +G+ C+ + + + HL +EAAR+MRY
Sbjct: 53 HLNHSLRGEESERDAAYVAELAAALGVPLCQ-QKVS-VKAYQAEHHLSTEEAAREMRYAF 110
Query: 183 FQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYA-YSCHDD 241
+ ++ + + H DD E +L L R SG GL G+ + + A C
Sbjct: 111 LCRTAAEYGSAAVAVGHTTDDNIETVMLHLVRGSGTRGLQGLR--PVLNRTVAGEGC--- 165
Query: 242 LKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLS---SC 298
+ ++RPLL S+ + C V+D TN+S +RNRIR+ + + +
Sbjct: 166 -----LRVIRPLLGLSRAETQNYCCEAGLSPVQDVTNQSTDLLRNRIRLEVLPMLRGINP 220
Query: 299 SFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAV--IDLEILNPS 348
+F+ + + ++ V S + E V D + I+++ L+P+
Sbjct: 221 AFEETILRTAFIAGEEMALLDEVTSQMKAELVIRQDNVLMIEKIEMQRLHPA 272
>TIGR_CMR|CBU_1509 [details] [associations]
symbol:CBU_1509 "tRNA(Ile)-lysidine synthetase"
species:227377 "Coxiella burnetii RSA 493" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 RefSeq:NP_820492.1
ProteinModelPortal:Q83BJ9 PRIDE:Q83BJ9 GeneID:1209419
KEGG:cbu:CBU_1509 PATRIC:17931783 HOGENOM:HOG000236507 OMA:SNQDDAY
ProtClustDB:CLSK914831 BioCyc:CBUR227377:GJ7S-1494-MONOMER
Uniprot:Q83BJ9
Length = 449
Score = 167 (63.8 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 61/182 (33%), Positives = 92/182 (50%)
Query: 171 LQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQI 230
++ AR RY +FQ+ +++ LL AH +DQAE F+L+L R +GV GL+ M ++
Sbjct: 104 IEAVARKARYAIFQQALSENE--TLLTAHTENDQAETFLLQLLRGAGVKGLSAMPAKRKL 161
Query: 231 FSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRM 290
LVRPLL ++DD+ K + N WVED TN F RN +R
Sbjct: 162 GKGE--------------LVRPLLAITRDDLKKYAEKNNLRWVEDDTNLELRFNRNYLRH 207
Query: 291 SLGDLSSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNP-SK 349
+ + + E+ AVIS RS H C+ EA ++DQ A DL+++ S+
Sbjct: 208 EVLPILRRRWP-EVFAVIS-----RS-ANH-CA----EAALLLDQ-LAESDLQLIQKDSE 254
Query: 350 IE 351
+E
Sbjct: 255 LE 256
Score = 120 (47.3 bits), Expect = 0.00063, P = 0.00063
Identities = 33/102 (32%), Positives = 55/102 (53%)
Query: 123 LLAITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRL 182
L A+ ++HGL ++ + N + + I + R L +P ++ AR RY +
Sbjct: 58 LRALHINHGLNPKANDWENHCQQICNRLKIPFQSERVT-LSLQPGDS-IEAVARKARYAI 115
Query: 183 FQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGM 224
FQ+ +++ LL AH +DQAE F+L+L R +GV GL+ M
Sbjct: 116 FQQALSENE--TLLTAHTENDQAETFLLQLLRGAGVKGLSAM 155
>UNIPROTKB|Q48F76 [details] [associations]
symbol:tilS "tRNA(Ile)-lysidine synthase" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 GO:GO:0006400
EMBL:CP000058 GenomeReviews:CP000058_GR Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 HOGENOM:HOG000236507
ProtClustDB:CLSK868125 RefSeq:YP_275961.1 ProteinModelPortal:Q48F76
STRING:Q48F76 GeneID:3556878 KEGG:psp:PSPPH_3823 PATRIC:19977085
OMA:WRLESGE Uniprot:Q48F76
Length = 445
Score = 165 (63.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 66/203 (32%), Positives = 88/203 (43%)
Query: 87 LGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHR 146
+G SGG DS L L A K E + L AI V HGL+ +
Sbjct: 30 IGFSGGLDSTVLLHLLA--KLAKC-------ESLPVLHAIHVHHGLQAAANAWPEHCRQV 80
Query: 147 VSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAE 206
+G+ E+VR + G +++AAR RY F + VLL H DDQAE
Sbjct: 81 CQALGVAFELVRVNVDPG----ASIEQAARQARYTAFTDRLAEGD--VLLTGQHRDDQAE 134
Query: 207 LFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQ 266
+ RL R +GV GLA M +I + H LVRPLL S+ ++
Sbjct: 135 TLLFRLLRGAGVRGLAAMP-GQRILG----------RGH---LVRPLLAVSRVELEGYAH 180
Query: 267 GGNRDWVEDPTNRSPLFVRNRIR 289
+WVEDP+N F RN +R
Sbjct: 181 QHGLNWVEDPSNDDSRFSRNFLR 203
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 638 GRLSAKRAILSLKSIPVAARRSLPVLVSSHGQLLSIPSI 676
G KR +L+ +++PV R LP+L + LL++ ++
Sbjct: 384 GSRDLKR-LLNEQAVPVFLRGRLPLLYCDN-DLLAVANL 420
>UNIPROTKB|P67151 [details] [associations]
symbol:tilS "tRNA(Ile)-lysidine synthase" species:1773
"Mycobacterium tuberculosis" [GO:0040007 "growth" evidence=IMP]
HAMAP:MF_01161 InterPro:IPR012094 InterPro:IPR012795
InterPro:IPR015262 Pfam:PF09179 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR EMBL:BX842583 GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 HOGENOM:HOG000236508 KO:K04075
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02432 PIR:B70561
RefSeq:NP_218142.1 RefSeq:NP_338274.1 RefSeq:YP_006517114.1
ProteinModelPortal:P67151 SMR:P67151 PRIDE:P67151
EnsemblBacteria:EBMYCT00000000819 EnsemblBacteria:EBMYCT00000072485
GeneID:13317233 GeneID:885409 GeneID:922761 KEGG:mtc:MT3727
KEGG:mtu:Rv3625c KEGG:mtv:RVBD_3625c PATRIC:18129949
TubercuList:Rv3625c OMA:QDPHNSD ProtClustDB:CLSK792603
Uniprot:P67151
Length = 323
Score = 121 (47.7 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 35/100 (35%), Positives = 49/100 (49%)
Query: 125 AITVDHGLREESKEEANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQ 184
A+ VDHGL+ S A R+ + + C R + G + AAR RY +
Sbjct: 53 ALIVDHGLQPGSATVAETA--RIQAISLGCVDARVLCVQVGAAGGR-EAAARSARYSALE 109
Query: 185 KVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGM 224
+H+ G +L+AH DDQAE +L L R SG +AGM
Sbjct: 110 ----EHRDGPVLLAHTLDDQAETVLLGLGRGSGARSIAGM 145
Score = 65 (27.9 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 16/40 (40%), Positives = 23/40 (57%)
Query: 69 AFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAG-WKT 107
A + + A L R ++G+SGGPDS+AL + A W T
Sbjct: 12 AAAEQFARVHLDACDRWSVGLSGGPDSLALTAVAARLWPT 51
Score = 57 (25.1 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 21/91 (23%), Positives = 34/91 (37%)
Query: 251 RPLLDFSKDDMYKICQG-GNRDWVEDPTNRSPLFVRNRIRMS----LGDLSSCSFKSELQ 305
RPLL + + C+ G W +DP N F R R+R L D+ L
Sbjct: 154 RPLLGVRRSVTHAACRELGLTAW-QDPHNTDRRFTRTRLRTEVLPLLEDVLGGGVAEALA 212
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQG 336
+A R ++ + + + A +G
Sbjct: 213 RTATALREDTDLIDTIAAQALPGAAVAGSRG 243
>UNIPROTKB|Q4KHF9 [details] [associations]
symbol:tilS "tRNA(Ile)-lysidine synthase" species:220664
"Pseudomonas protegens Pf-5" [GO:0006400 "tRNA modification"
evidence=ISS] [GO:0016879 "ligase activity, forming carbon-nitrogen
bonds" evidence=ISS] HAMAP:MF_01161 InterPro:IPR012094
InterPro:IPR012795 InterPro:IPR012796 InterPro:IPR015262
Pfam:PF09179 Pfam:PF11734 SMART:SM00977 Pfam:PF01171 GO:GO:0005524
GO:GO:0005737 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006400
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075
PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432
HOGENOM:HOG000236507 ProtClustDB:CLSK868125 OMA:WRLESGE
RefSeq:YP_258324.1 ProteinModelPortal:Q4KHF9 STRING:Q4KHF9
GeneID:3477215 KEGG:pfl:PFL_1193 PATRIC:19871593
BioCyc:PFLU220664:GIX8-1198-MONOMER Uniprot:Q4KHF9
Length = 438
Score = 162 (62.1 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 59/200 (29%), Positives = 86/200 (43%)
Query: 90 SGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHRVSD 149
SGG DS L L AG Q+ + L A+ + HGL+ +
Sbjct: 26 SGGLDSTVLLHLLAG-----LAQHHR----LPPLSAVHIHHGLQAAADAWPEHCQAFCDA 76
Query: 150 MGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFI 209
+G+ +++R P L+ AAR+ RY F ++ + VLL A H DDQAE +
Sbjct: 77 LGVPLQVLRVQV----PAGASLERAAREARYGAFARLTASGE--VLLTAQHRDDQAETLL 130
Query: 210 LRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQGGN 269
RL R +GV GL+ M + L+RPLLD S+ ++
Sbjct: 131 FRLLRGAGVRGLSAMPSERPLGDGQ--------------LLRPLLDVSRAELQCYAAEHQ 176
Query: 270 RDWVEDPTNRSPLFVRNRIR 289
WVEDP+N + RN +R
Sbjct: 177 LSWVEDPSNADHQYSRNYLR 196
>TIGR_CMR|GSU_1810 [details] [associations]
symbol:GSU_1810 "tRNA(Ile)-lysidine synthetase"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
Pfam:PF11734 SMART:SM00977 Pfam:PF01171 GO:GO:0005524 GO:GO:0005737
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0008033
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037
InterPro:IPR011063 InterPro:IPR020825 SUPFAM:SSF56037
HOGENOM:HOG000236506 KO:K04075 OMA:NDISYPL PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 RefSeq:NP_952860.1
ProteinModelPortal:Q74C65 GeneID:2686327 KEGG:gsu:GSU1810
PATRIC:22026475 ProtClustDB:CLSK828574
BioCyc:GSUL243231:GH27-1861-MONOMER Uniprot:Q74C65
Length = 471
Score = 155 (59.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 81/312 (25%), Positives = 128/312 (41%)
Query: 63 MTKYREAFSRRMAMAGLKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDG 122
+ K R AF+ M +P R+ + VSGG DS+AL + N+ +D
Sbjct: 11 LKKVR-AFNAEHGM--FRPGDRVVVAVSGGADSVALVDILVS-----LNELR-----LD- 56
Query: 123 LLAITVDHGLR-EESKEEANIVSHRVSDMGI----RCEIVRC--DWLDGRPKQGHLQEAA 175
L+ ++H LR S E+ V + R E V+ +W ++ L++A
Sbjct: 57 LVVAHLNHKLRGAASDEDERFVEQCAQTYALPFVSRGEQVKALAEW-----ERLSLEDAG 111
Query: 176 RDMRYRLFQKVCIQHQIGVLLIAHHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYA 235
R RY F V + +AHHADDQAE ++RL R +G LGL+ M + +
Sbjct: 112 RRARYAFFDDVAAACGARTVALAHHADDQAETLLMRLVRGAGGLGLSAM---QPVGAGGK 168
Query: 236 YSCHDDLKNHSILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL--- 292
Y VRPLL + ++ + +D +N F+RNRIR L
Sbjct: 169 Y-------------VRPLLALGRQEIEAYLDARGLAFRQDQSNTDVAFLRNRIRHELVPY 215
Query: 293 -GDLSSCSFKSELQAVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILN--PSK 349
G L+ + S L + + + + V V +QG A+ ++ L P
Sbjct: 216 LGRLNPGA-ASRLARTAELLADDEALLSRLVEEALRRHVMVTEQGGAICSVDTLRREPRG 274
Query: 350 IEDIFLSKFLAL 361
+ K +AL
Sbjct: 275 LRRRLYRKAIAL 286
>UNIPROTKB|Q886M6 [details] [associations]
symbol:tilS "tRNA(Ile)-lysidine synthase" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 GO:GO:0006400
EMBL:AE016853 GenomeReviews:AE016853_GR Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 HOGENOM:HOG000236507
RefSeq:NP_791376.1 ProteinModelPortal:Q886M6 GeneID:1183188
KEGG:pst:PSPTO_1551 PATRIC:19994354 OMA:NERWLAN
ProtClustDB:CLSK868125 BioCyc:PSYR223283:GJIX-1579-MONOMER
Uniprot:Q886M6
Length = 445
Score = 148 (57.2 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 63/203 (31%), Positives = 85/203 (41%)
Query: 87 LGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIVSHR 146
+G SGG DS L L A N + L AI V HGL+ +
Sbjct: 30 VGFSGGLDSTVLLHLLAELAK---RAN------LPALHAIHVHHGLQAIADAWPEHCRQV 80
Query: 147 VSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIAHHADDQAE 206
+G+ E VR G +++AAR RY F + + VLL H DDQAE
Sbjct: 81 CQALGVAFESVRVKVEPG----ASVEQAARQARYAAFTERLGEGD--VLLTGQHRDDQAE 134
Query: 207 LFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMYKICQ 266
+ RL R +GV GLA M ++ + H L RPLL S+ ++ +
Sbjct: 135 TLLFRLLRGAGVRGLAAMPEQRRLG-----------RGH---LARPLLGVSRVELESYAR 180
Query: 267 GGNRDWVEDPTNRSPLFVRNRIR 289
WVEDP+N F RN +R
Sbjct: 181 RQGLRWVEDPSNDDQQFSRNFLR 203
>TIGR_CMR|SO_1645 [details] [associations]
symbol:SO_1645 "tRNA(Ile)-lysidine synthetase"
species:211586 "Shewanella oneidensis MR-1" [GO:0006400 "tRNA
modification" evidence=ISS] [GO:0016879 "ligase activity, forming
carbon-nitrogen bonds" evidence=ISS] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008033 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
InterPro:IPR020825 SUPFAM:SSF56037 KO:K04075 PANTHER:PTHR11807:SF2
TIGRFAMs:TIGR02433 TIGRFAMs:TIGR02432 HOGENOM:HOG000236507
RefSeq:NP_717256.1 ProteinModelPortal:Q8EGF9 GeneID:1169439
KEGG:son:SO_1645 PATRIC:23522924 OMA:KSAVGFF ProtClustDB:CLSK906358
Uniprot:Q8EGF9
Length = 464
Score = 144 (55.7 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 63/214 (29%), Positives = 92/214 (42%)
Query: 79 LKPHHRIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKE 138
L+ ++ L SGG DS L G ++ + + L I V HGL +
Sbjct: 19 LQAGSKLVLAYSGGVDSEVLAY--------GLSEYAKQRPDLRYQL-IYVHHGLSPNADN 69
Query: 139 EANIVSHRVSDMGIRCEIVRCDWLDGRPKQGHLQEAARDMRYRLFQKVCIQHQIGVLLIA 198
A R + G+ + R + G P+ ++ AR RY+ + Q +LL A
Sbjct: 70 WAKHCQARAAIYGLPVTVERVQLILG-PRVS-VEAEARKARYQAILPH-LNPQ-DILLTA 125
Query: 199 HHADDQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSK 258
HH DDQ E +L L R G GLA M QI S D S L VRPLLD S+
Sbjct: 126 HHEDDQLETILLALKRGQGPKGLAAMG---QI---QPLSLAD---KGSCLQVRPLLDISR 176
Query: 259 DDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSL 292
+ + Q +ED +N+ + RN +R+ +
Sbjct: 177 EMIETFAQTRQLVHIEDESNQDDKYDRNFLRLEI 210
>UNIPROTKB|Q2GJ10 [details] [associations]
symbol:APH_1056 "Putative cell cycle protein MesJ"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012094 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0008033 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 RefSeq:YP_505613.1 RefSeq:YP_505641.1
ProteinModelPortal:Q2GJ10 STRING:Q2GJ10 GeneID:3930220
GeneID:3930582 KEGG:aph:APH_1056 KEGG:aph:APH_1093 PATRIC:20950866
ProtClustDB:CLSK748349 BioCyc:APHA212042:GHPM-1062-MONOMER
BioCyc:APHA212042:GHPM-1099-MONOMER Uniprot:Q2GJ10
Length = 269
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/173 (24%), Positives = 74/173 (42%)
Query: 247 ILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFK-SELQ 305
+ ++RPLLDF++ ++ + + W+EDP+N P + R R + + S L
Sbjct: 21 VTIIRPLLDFTRREIQEYAIQHQQPWIEDPSNSDPKYRRTFYRNFINNCKHPEILISRLS 80
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQF 365
+ +R+ S + H N ++ + GY VI ++ ++D S+ L++
Sbjct: 81 STALHMQRSLSCILHYVQNALDSCLEFTPFGYVVIKHDVFR--NLQDEIASRLFLLLIMT 138
Query: 366 ICQRQRPVRGSTSKLLLHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSI 418
I + R S L +R+ S T GC + T S A SSI
Sbjct: 139 IGNKPLKPRFSKFSSALSKVRSTAGFASFTLHGCMILKTCDSNIIVAREVSSI 191
>TIGR_CMR|APH_1056 [details] [associations]
symbol:APH_1056 "putative cell cycle protein MesJ"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012094 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0008033 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 RefSeq:YP_505613.1 RefSeq:YP_505641.1
ProteinModelPortal:Q2GJ10 STRING:Q2GJ10 GeneID:3930220
GeneID:3930582 KEGG:aph:APH_1056 KEGG:aph:APH_1093 PATRIC:20950866
ProtClustDB:CLSK748349 BioCyc:APHA212042:GHPM-1062-MONOMER
BioCyc:APHA212042:GHPM-1099-MONOMER Uniprot:Q2GJ10
Length = 269
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/173 (24%), Positives = 74/173 (42%)
Query: 247 ILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFK-SELQ 305
+ ++RPLLDF++ ++ + + W+EDP+N P + R R + + S L
Sbjct: 21 VTIIRPLLDFTRREIQEYAIQHQQPWIEDPSNSDPKYRRTFYRNFINNCKHPEILISRLS 80
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQF 365
+ +R+ S + H N ++ + GY VI ++ ++D S+ L++
Sbjct: 81 STALHMQRSLSCILHYVQNALDSCLEFTPFGYVVIKHDVFR--NLQDEIASRLFLLLIMT 138
Query: 366 ICQRQRPVRGSTSKLLLHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSI 418
I + R S L +R+ S T GC + T S A SSI
Sbjct: 139 IGNKPLKPRFSKFSSALSKVRSTAGFASFTLHGCMILKTCDSNIIVAREVSSI 191
>TIGR_CMR|APH_1093 [details] [associations]
symbol:APH_1093 "putative cell cycle protein MesJ"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR012094 Pfam:PF01171
GO:GO:0005524 GO:GO:0005737 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0008033 GO:GO:0016879 eggNOG:COG0037 InterPro:IPR011063
PANTHER:PTHR11807:SF2 RefSeq:YP_505613.1 RefSeq:YP_505641.1
ProteinModelPortal:Q2GJ10 STRING:Q2GJ10 GeneID:3930220
GeneID:3930582 KEGG:aph:APH_1056 KEGG:aph:APH_1093 PATRIC:20950866
ProtClustDB:CLSK748349 BioCyc:APHA212042:GHPM-1062-MONOMER
BioCyc:APHA212042:GHPM-1099-MONOMER Uniprot:Q2GJ10
Length = 269
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/173 (24%), Positives = 74/173 (42%)
Query: 247 ILLVRPLLDFSKDDMYKICQGGNRDWVEDPTNRSPLFVRNRIRMSLGDLSSCSFK-SELQ 305
+ ++RPLLDF++ ++ + + W+EDP+N P + R R + + S L
Sbjct: 21 VTIIRPLLDFTRREIQEYAIQHQQPWIEDPSNSDPKYRRTFYRNFINNCKHPEILISRLS 80
Query: 306 AVISACRRTRSYVEHVCSNLINEAVTVMDQGYAVIDLEILNPSKIEDIFLSKFLALVLQF 365
+ +R+ S + H N ++ + GY VI ++ ++D S+ L++
Sbjct: 81 STALHMQRSLSCILHYVQNALDSCLEFTPFGYVVIKHDVFR--NLQDEIASRLFLLLIMT 138
Query: 366 ICQRQRPVRGSTSKLLLHYIRTFPCKTSLTAAGCYLCPTPGSRGTKALVCSSI 418
I + R S L +R+ S T GC + T S A SSI
Sbjct: 139 IGNKPLKPRFSKFSSALSKVRSTAGFASFTLHGCMILKTCDSNIIVAREVSSI 191
>UNIPROTKB|P52097 [details] [associations]
symbol:tilS species:83333 "Escherichia coli K-12"
[GO:0006400 "tRNA modification" evidence=IDA] [GO:0032267
"tRNA(Ile)-lysidine synthase activity" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0002136 "wobble base lysidine
biosynthesis" evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] HAMAP:MF_01161
InterPro:IPR012094 InterPro:IPR012795 InterPro:IPR012796
InterPro:IPR015262 Pfam:PF09179 Pfam:PF11734 SMART:SM00977
Pfam:PF01171 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR EMBL:D49445
EMBL:U70214 Gene3D:3.40.50.620 InterPro:IPR014729 eggNOG:COG0037
InterPro:IPR011063 EMBL:Z50870 InterPro:IPR020825 SUPFAM:SSF56037
KO:K04075 PANTHER:PTHR11807:SF2 TIGRFAMs:TIGR02433
TIGRFAMs:TIGR02432 HOGENOM:HOG000236507 OMA:SNQDDAY EMBL:BR000032
PIR:D64743 RefSeq:NP_414730.1 RefSeq:YP_488490.1 PDB:1NI5
PDBsum:1NI5 ProteinModelPortal:P52097 SMR:P52097 DIP:DIP-10190N
IntAct:P52097 MINT:MINT-1261006 PRIDE:P52097
EnsemblBacteria:EBESCT00000004816 EnsemblBacteria:EBESCT00000015119
GeneID:12932691 GeneID:944889 KEGG:ecj:Y75_p0184 KEGG:eco:b0188
PATRIC:32115487 EchoBASE:EB3011 EcoGene:EG13220
ProtClustDB:PRK10660 BioCyc:EcoCyc:G6096-MONOMER
BioCyc:ECOL316407:JW0183-MONOMER BioCyc:MetaCyc:G6096-MONOMER
EvolutionaryTrace:P52097 Genevestigator:P52097 GO:GO:0032267
GO:GO:0002136 Uniprot:P52097
Length = 432
Score = 142 (55.0 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 57/208 (27%), Positives = 92/208 (44%)
Query: 84 RIALGVSGGPDSMALCVLTAGWKTGGFNQNGEAGEFIDGLLAITVDHGLREESKEEANIV 143
+I + SGG DS L W+T G A L AI V HGL +
Sbjct: 14 QILVAFSGGLDSTVLLHQLVQWRT---ENPGVA------LRAIHVHHGLSANADAWVTHC 64
Query: 144 SHRVSDMGIRCEIVRCDWLDGRPKQG-HLQEAARDMRYRLFQKVCIQHQIGVLLIAHHAD 202
+ + + R ++G ++ AR RY+ F + + + VL+ A H D
Sbjct: 65 ENVCQQWQVPLVVERVQLA----QEGLGIEAQARQARYQAFARTLLPGE--VLVTAQHLD 118
Query: 203 DQAELFILRLSRNSGVLGLAGMAFSSQIFSSYAYSCHDDLKNHSILLVRPLLDFSKDDMY 262
DQ E F+L L R SG GL+ MA ++ S +A L+RPLL ++ ++
Sbjct: 119 DQCETFLLALKRGSGPAGLSAMA---EV-SEFA----------GTRLIRPLLARTRGELV 164
Query: 263 KICQGGNRDWVEDPTNRSPLFVRNRIRM 290
+ + + W+ED +N+ + RN +R+
Sbjct: 165 QWARQYDLRWIEDESNQDDSYDRNFLRL 192
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.137 0.413 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 704 681 0.00079 121 3 11 22 0.49 33
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 623 (66 KB)
Total size of DFA: 373 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 63.50u 0.11s 63.61t Elapsed: 00:00:03
Total cpu time: 63.51u 0.11s 63.62t Elapsed: 00:00:03
Start: Tue May 21 08:49:55 2013 End: Tue May 21 08:49:58 2013