BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005291
(704 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 590 bits (1522), Expect = e-167, Method: Compositional matrix adjust.
Identities = 298/650 (45%), Positives = 434/650 (66%), Gaps = 24/650 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + ++ +++ V N V+VVIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 514 SLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTKGKIGCTQPRRVAA 573
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E G RLGEEVGYAIRFED T T+IKY+TDG+LLREIL + +LS YSVI+
Sbjct: 574 MSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILIDENLSQYSVIM 633
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+L+ R L++++TSATLD EK S +F NC +PG+ +
Sbjct: 634 LDEAHERTIHTDVLFGLLKKLMKRRLD-LRLIVTSATLDAEKFSGYFFNCNIFTIPGRTF 692
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++K+ T YL++AL T + IH+ EPEGD+L+F+TGQ++I+ L ++++ L +
Sbjct: 693 PVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQEEIDSACQSLYERMKGLGK 752
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ + +ILP++ +LP EMQ R+F PPPP R+ +V+TNIAE SLT+DG+ YV+D G+ K
Sbjct: 753 -NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAK 811
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q YNP G+ SL + IS+ A QR GRAGRT PGKCYRLY + Y +E ++PEIQ
Sbjct: 812 QNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQ 871
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L + L +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 872 RINLGMTTLTMKAMGINDL--LSFDFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRK 929
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
MAE PLEP LS+ML+ + + GC + LT+ AM+ R K + +K P+
Sbjct: 930 MAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQPE 989
Query: 483 GSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLD 542
GDH+ LL +YE W ++ W +N +Q R + +D+RKQL IM K LD
Sbjct: 990 ----GDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIMDKY---KLD 1042
Query: 543 VRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELKTD 602
V + +++ K+RKA+ G+ A R GYRTL + Q V +HPSS L
Sbjct: 1043 VVT------AGKNFTKIRKAITAGFFFHGA-RKDPQEGYRTL-VENQPVYIHPSSALFQR 1094
Query: 603 EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLS 651
+ P++V+YH+L+ T++ YMR V ++ +W++ + + K+ D K+S
Sbjct: 1095 Q----PDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMS 1140
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust.
Identities = 299/652 (45%), Positives = 441/652 (67%), Gaps = 28/652 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI E ++ V ++ ++VVIGETGSGK+TQ++Q L GY G IG TQPRRVAA
Sbjct: 507 SLPIFPLREAFLQAVSEHQLLVVIGETGSGKTTQMAQYLAEAGYGTRGKIGCTQPRRVAA 566
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SV++RVA+E G +LG+EVGYAIRFED TS T+IK++TDG+LLRE L +P+LS YSVII
Sbjct: 567 MSVSKRVAEEFGCQLGQEVGYAIRFEDCTSPETIIKFMTDGILLRECLLDPNLSAYSVII 626
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ + R +LK+LITSATL+ EK SK+F N +PG+ +
Sbjct: 627 LDEAHERTISTDVLFGLLKQALQ-RRPELKVLITSATLEAEKFSKYFMNAQLFIIPGRTF 685
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++K+ YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 686 PVDIRYTKDPEADYLDASLITVMQIHLSEPPGDILLFLTGQEEIDAACQILYERMKSL-- 743
Query: 243 GSCM-DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
GS + D +ILP++ +LP EMQ ++F P PP R+ +++TNIAETSLT+DG+ YVID G+
Sbjct: 744 GSNVPDLIILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFS 803
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ +NP +GM SL V IS+ A QR GRAGRT PGKCYRLY + + +E L ++PEI
Sbjct: 804 KQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEI 863
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR++L +VL +K++ ++D+ L FDF+DPP ++L A++QLY + A+DE G +T +GR
Sbjct: 864 QRTNLGNTVLTMKAMGINDL--LNFDFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGR 921
Query: 422 TMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELP 481
MAE PL+P LS+ML+ + + GC + LTV AMLS + + K +K P
Sbjct: 922 KMAEFPLDPQLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFFQP 981
Query: 482 DGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSL 541
+ GDH+ LL +YE W + W +N +Q R + +D+RKQL IM + L
Sbjct: 982 E----GDHLTLLNVYESWKNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDRY---KL 1034
Query: 542 DVRANHIWKESRQDYRKLRKALCVG-YANQLAERMIHHNGYRTLGFKPQLVQVHPSSELK 600
D+ + + ++Y K++KA+C G +AN A + + GY+TL + Q V +HPSS L
Sbjct: 1035 DIIS------AGRNYTKIQKAICSGFFAN--ASKKDPNEGYKTL-VEGQPVYIHPSSTLF 1085
Query: 601 TDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLS 651
P++V+YHEL+ T++ YMR VC ++ +W++ + K K D NK+S
Sbjct: 1086 NRN----PDWVIYHELVMTTKEYMREVCTIDPKWLVELAPKFFKTSDPNKIS 1133
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/658 (45%), Positives = 429/658 (65%), Gaps = 30/658 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + +E +V+ V N +++VIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 647
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 648 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 707
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 708 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 766
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 767 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 826
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 827 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 885
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 886 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 945
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 946 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 1003
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSK---STEKKRKHTPLE 479
MAE PLEP L +ML+ + GC + LT+ +MLS + + K + +KK K E
Sbjct: 1004 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE 1063
Query: 480 LPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKG 539
GDH+ LL +Y W + W +N +Q R + +DIRKQ+ IM +
Sbjct: 1064 -------GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD---RH 1113
Query: 540 SLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSEL 599
LDV + + +++KA+C G+ A++ GYRTL Q+V +HPSS L
Sbjct: 1114 KLDVVS------CGKSTVRVQKAICSGFFRNAAKK-DPQEGYRTL-IDQQVVYIHPSSAL 1165
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLSGGAGQ 656
+ P +VVYHEL+ T++ YMR V ++ +W++ K+ D KLS Q
Sbjct: 1166 FNRQ----PEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQ 1219
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 575 bits (1483), Expect = e-163, Method: Compositional matrix adjust.
Identities = 298/658 (45%), Positives = 429/658 (65%), Gaps = 30/658 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + +E +V+ V N +++VIGETGSGK+TQ++Q L GYT G IG TQPRRVAA
Sbjct: 564 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGYTSRGKIGCTQPRRVAA 623
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E G LG+EVGY IRFED TS T+IKY+TDG+LLRE L +PDL+ Y++I+
Sbjct: 624 MSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLTQYAIIM 683
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K+ V R +K+++TSATLD K S++F P +PG+ Y
Sbjct: 684 LDEAHERTIHTDVLFGLLKKTVQKRQD-MKLIVTSATLDAVKFSQYFYEAPIFTIPGRTY 742
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL++KE T YL+++L T + IH+ EP GD+L+F+TGQ++I+ L ++++SL
Sbjct: 743 PVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGP 802
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++ +LP EMQ R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 803 -DVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK 861
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YN +G+ L V IS+ QA QR GRAGRT PGKCYRLY Y DE L VPEIQ
Sbjct: 862 QKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQ 921
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA +VL LK++ ++D+ L FDF+D P E+L A++QLY + A+D+ G +T +GR
Sbjct: 922 RTNLASTVLSLKAMGINDL--LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRR 979
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSK---STEKKRKHTPLE 479
MAE PLEP L +ML+ + GC + LT+ +MLS + + K + +KK K E
Sbjct: 980 MAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQTE 1039
Query: 480 LPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKG 539
GDH+ LL +Y W + W +N +Q R + +DIRKQ+ IM +
Sbjct: 1040 -------GDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD---RH 1089
Query: 540 SLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSEL 599
LDV + + +++KA+C G+ A++ GYRTL Q+V +HPSS L
Sbjct: 1090 KLDVVS------CGKSTVRVQKAICSGFFRNAAKK-DPQEGYRTL-IDQQVVYIHPSSAL 1141
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLSGGAGQ 656
+ P +VVYHEL+ T++ YMR V ++ +W++ K+ D KLS Q
Sbjct: 1142 FNRQ----PEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQ 1195
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 572 bits (1474), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/665 (43%), Positives = 426/665 (64%), Gaps = 32/665 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ V + ++++ GETGSGK+TQ+ Q L GYT+ G+ I TQPRRVA
Sbjct: 402 SLPVFPFREELLAAVANHQILIIEGETGSGKTTQIPQYLFEEGYTQKGMKIACTQPRRVA 461
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 462 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 521
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SATLD + S FF + P +PG+
Sbjct: 522 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATLDTARFSTFFDDAPVFRIPGRR 580
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 581 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 640
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 641 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 699
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 700 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 759
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 760 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 817
Query: 422 TMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRKHTPLEL 480
MAELP++P LS+M++ + ++ C + LTVAAMLS ++ + K L
Sbjct: 818 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 877
Query: 481 PDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGS 540
P GDH+ LL +Y W E Y W +N +Q R M +D+R+QL +++++ G
Sbjct: 878 PG----GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 933
Query: 541 LDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELK 600
+ DY ++RKA+ GY A + +GYRT+ + Q V +HP+S L
Sbjct: 934 SSCQG---------DYIRVRKAITAGYFYHTAR--LTRSGYRTVK-QQQTVFIHPNSSLF 981
Query: 601 TDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI------LKKLEKIDINKLSGGA 654
++ P +++YHEL+ T++ +MR V +E W++ + K+LE K+
Sbjct: 982 EEQ----PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKT 1037
Query: 655 GQMEE 659
G+ E
Sbjct: 1038 GKTRE 1042
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/665 (43%), Positives = 424/665 (63%), Gaps = 32/665 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ + + V+++ GETGSGK+TQ+ Q L GYT G+ I TQPRRVA
Sbjct: 401 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 460
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 461 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 520
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 521 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRR 579
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 580 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 639
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 640 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 698
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 699 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 758
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 759 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 816
Query: 422 TMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRKHTPLEL 480
MAELP++P LS+M++ + ++ C + LTVAAMLS ++ + K L
Sbjct: 817 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 876
Query: 481 PDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGS 540
P GDH+ LL +Y W E Y W +N +Q R M +D+R+QL +++++ G
Sbjct: 877 PG----GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 932
Query: 541 LDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELK 600
+ DY ++RKA+ GY A + +GYRT+ + Q V +HP+S L
Sbjct: 933 SSCQG---------DYIRVRKAITAGYFYHTAR--LTRSGYRTVK-QQQTVFIHPNSSLF 980
Query: 601 TDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI------LKKLEKIDINKLSGGA 654
+ P +++YHEL+ T++ +MR V +E W++ + K+LE K+
Sbjct: 981 EQQ----PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKI 1036
Query: 655 GQMEE 659
G+ E
Sbjct: 1037 GKTRE 1041
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 569 bits (1467), Expect = e-161, Method: Compositional matrix adjust.
Identities = 287/665 (43%), Positives = 424/665 (63%), Gaps = 32/665 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + E ++ + + V+++ GETGSGK+TQ+ Q L GYT G+ I TQPRRVA
Sbjct: 398 SLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVA 457
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+GV+LG EVGY+IRFED TSERT+++Y+TDG+LLRE LS PDL+ YSV+
Sbjct: 458 AMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVV 517
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GL+K + R +LK+L+ SAT+D + S FF + P +PG+
Sbjct: 518 MVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRR 576
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
+PV+I ++K YLE+ + + + IHV +P GD+L+F+TGQ++IE L+D+ R L
Sbjct: 577 FPVDIFYTKAPEADYLEACVVSVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLG 636
Query: 242 EGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYV 301
+ ++LP++ +LP +MQ R+F P PP R+ +V+TNIAETSLT++G++YV+D G+
Sbjct: 637 -SKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFC 695
Query: 302 KQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEI 361
KQ+ YNP +GM SL V SK ANQR GRAGR GKC+RLY + Y E + TVPEI
Sbjct: 696 KQKSYNPRTGMESLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEI 755
Query: 362 QRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGR 421
QR+SL VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T+ GR
Sbjct: 756 QRTSLGNVVLLLKSLGIHDL--MHFDFLDPPPYETLLLALEQLYALGALNHLGELTTSGR 813
Query: 422 TMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRKHTPLEL 480
MAELP++P LS+M++ + ++ C + LTVAAMLS ++ + K L
Sbjct: 814 KMAELPVDPMLSKMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFL 873
Query: 481 PDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGS 540
P GDH+ LL +Y W E Y W +N +Q R M +D+R+QL +++++ G
Sbjct: 874 PG----GDHLVLLNVYTQWAESGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 929
Query: 541 LDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELK 600
+ DY ++RKA+ GY A + +GYRT+ + Q V +HP+S L
Sbjct: 930 SSCQG---------DYIRVRKAITAGYFYHTAR--LTRSGYRTVK-QQQTVFIHPNSSLF 977
Query: 601 TDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI------LKKLEKIDINKLSGGA 654
+ P +++YHEL+ T++ +MR V +E W++ + K+LE K+
Sbjct: 978 EQQ----PRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKAKELEDPHAKKMPKKI 1033
Query: 655 GQMEE 659
G+ E
Sbjct: 1034 GKTRE 1038
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 567 bits (1462), Expect = e-161, Method: Compositional matrix adjust.
Identities = 294/650 (45%), Positives = 422/650 (64%), Gaps = 24/650 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI ++ ++E + N ++VV+GETGSGK+TQ++Q G + G IG TQPRRVAA
Sbjct: 539 SLPIFALKKNLMEAMIDNQILVVVGETGSGKTTQMTQYAIEAGLGRRGKIGCTQPRRVAA 598
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E G +LG +VGY IRFED TS+ T+IKY+TDG+LLRE L +PDLS YS+I+
Sbjct: 599 MSVAKRVAEEYGCKLGTDVGYTIRFEDCTSQDTIIKYMTDGMLLRECLIDPDLSGYSLIM 658
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+++TD+L GL+K R +LK++ITSATLD K S++F P +PG+ +
Sbjct: 659 LDEAHERTIHTDVLFGLLKAAARKRP-ELKLIITSATLDSVKFSEYFLEAPIFTIPGRTF 717
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEIL+++E + YLE+A T + IH+ EP GDVL+F+TGQ++I+ L ++++S+
Sbjct: 718 PVEILYTREPESDYLEAAHITVMQIHLTEPPGDVLVFLTGQEEIDTSCEVLYERMKSMGP 777
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +ILP++G+LP EMQ R+F P P R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 778 -DVPELIILPVYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVK 836
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ YNP SGM SL V IS+ A QR GRAGRT PGKCYRLY + DE L VPEIQ
Sbjct: 837 QKIYNPKSGMDSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQ 896
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA ++L LK++ ++ N++ FDF+D P +S+ AL L+ + A+D +G +T +GR
Sbjct: 897 RTNLASTLLQLKAMGIN--NLIDFDFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRR 954
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
MAE PLEPSLS++L+ + + GC + LT+ AML+ + + K +K P+
Sbjct: 955 MAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAMLNVQNIFYRPKEKQDHADQKKAKFHQPE 1014
Query: 483 GSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLD 542
GDH+ LL +Y W + W +N +QVR M +DIRKQL IM
Sbjct: 1015 ----GDHLTLLAVYNSWKNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMD-------- 1062
Query: 543 VRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELKTD 602
R + +D +++KA+C G+ A+R GYRTL Q V +HPSS
Sbjct: 1063 -RHKLLMVSCGRDVSRVQKAICSGFFRNAAKR-DPQEGYRTLT-DGQNVYIHPSSACFQQ 1119
Query: 603 EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLS 651
+ P +VVYHEL+ T++ YMR V A++ +W++ KI D KLS
Sbjct: 1120 Q----PEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSFFKIGDSTKLS 1165
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 556 bits (1434), Expect = e-157, Method: Compositional matrix adjust.
Identities = 288/650 (44%), Positives = 419/650 (64%), Gaps = 24/650 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTK-SGIIGVTQPRRVAA 62
LP+ + + +E V +N ++V++GETGSGK+TQ++Q L GYT S +IG TQPRRVAA
Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAA 569
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+G R+GEEVGY IRFED+TS T IKY+TDG+L RE L +P LS YSVII
Sbjct: 570 MSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVII 629
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER++ TD+L GL+K V L+ LK+++TSATLD E+ S +F CP +PG+ Y
Sbjct: 630 LDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSY 688
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI+++K+ YL++AL T + IH+ E GD+L+F+TGQ++I+ L ++ + L +
Sbjct: 689 PVEIMYTKQPEADYLDAALMTVMQIHLSEGPGDILVFLTGQEEIDTSCEILYERSKMLGD 748
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
S + VILP++ +LP E+Q R+F P PP R+ +++TNIAETSLT+DG+ YV+D G+VK
Sbjct: 749 -SIPELVILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVK 807
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q ++P GM SL V IS+ QA QR GRAGRT PGKCYRLY + Y +E L +PEIQ
Sbjct: 808 QSCFDPKLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQ 867
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R +L+ ++L LK++ ++D+ L FDF+DPP ++++ AL+ LY + A+D+ G +T +GR
Sbjct: 868 RQNLSHTILMLKAMGINDL--LNFDFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRK 925
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
MA+ P+EP LS++L+ + E GC + L++ AMLS R K E R+ P+
Sbjct: 926 MADFPMEPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQFANPE 985
Query: 483 GSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLD 542
DH+ LL +Y W NW ++ +Q RGM +D+RKQL ++M
Sbjct: 986 ----SDHLTLLNVYTTWKMNRCSDNWCYEHYIQARGMRRAEDVRKQLIRLMD-------- 1033
Query: 543 VRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELKTD 602
R H + + +ALC GY +A+R H Y+T+ + V +HPS L
Sbjct: 1034 -RYRHPVVSCGRKRELILRALCSGYFTNVAKRDSHEGCYKTI-VENAPVYMHPSGVLF-- 1089
Query: 603 EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKI-DINKLS 651
G +V+YHELI TS+ YM V V +W++ + K + N++S
Sbjct: 1090 --GKAAEWVIYHELIQTSKEYMHTVSTVNPKWLVEVAPTFFKFANANQVS 1137
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 556 bits (1432), Expect = e-157, Method: Compositional matrix adjust.
Identities = 290/664 (43%), Positives = 417/664 (62%), Gaps = 39/664 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP+ + ++ + +N VV+++GETGSGK+TQL+Q L G+ SG+IG TQPRRVAA+
Sbjct: 441 LPVFACRQKMMNVIRENNVVIIVGETGSGKTTQLAQYLLEDGFGDSGLIGCTQPRRVAAM 500
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVARRVA E+GV LG++VGYAIRFED TSE+T+IKY+TDG+LLRE L + L YS II+
Sbjct: 501 SVARRVADEMGVDLGQDVGYAIRFEDCTSEKTIIKYMTDGILLRECLGDGSLDQYSAIIM 560
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFF-SNCPTLNVPGKLY 182
DEAHERSLNTD+L GL++ ++ RA LK+++TSAT+D +K + FF NCPT +PG+ +
Sbjct: 561 DEAHERSLNTDVLFGLLREVIAKRAD-LKLIVTSATMDADKFADFFGGNCPTFTIPGRTF 619
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVE+ H++ Y+++A+K A+ IH+ +GD+LIFM GQ+DIE +++K+ LDE
Sbjct: 620 PVELFHARTPVEDYVDAAVKQAVTIHLGGMDGDILIFMPGQEDIECTCEMIKEKLGELDE 679
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID G+ K
Sbjct: 680 APPL--AVLPIYSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCK 737
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+ YNP GM +L + +S+ ANQR GRAGRT PG+CYRLY + DE L TVPEIQ
Sbjct: 738 MKVYNPRIGMDALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQ 797
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++LA VL LKSL + D+ LKF F+D P +++ +++ QL+ + A+D G +T +GR
Sbjct: 798 RTNLANVVLLLKSLGVDDL--LKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRK 855
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
M E PL+P+LS+ML+ + E GC + LT+ +MLS + + E K ++P+
Sbjct: 856 MVEFPLDPTLSKMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKKEKFQVPE 915
Query: 483 GSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLD 542
DH+ L +Y W Y W DN L V+ + V+++R QL +IMQ D
Sbjct: 916 ----SDHLTFLNVYIQWRTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQ-------D 964
Query: 543 VRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQV--------H 594
++ I S D +RK +C Y HN R G + V V H
Sbjct: 965 LKLPLISNGSEWDI--VRKCICSAY---------FHNAARLKGIG-EYVNVRTGIPCFLH 1012
Query: 595 PSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKLSGGA 654
P+S L G +P+YVVYHELI T++ YM+ V AV+ W+ + I +K S
Sbjct: 1013 PTSALFG--MGFMPDYVVYHELIMTAKEYMQCVTAVDAIWLAELGPMFYSIKESKQSRKE 1070
Query: 655 GQME 658
+ME
Sbjct: 1071 LKME 1074
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 548 bits (1411), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/636 (44%), Positives = 409/636 (64%), Gaps = 30/636 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI ++ ++ + N +V+V+GETGSGK+TQL+Q LH GYT G+IG TQPRRVAA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSENTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFAAFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
Query: 424 AELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483
E PL+P+LS+ML+ + + GC S+ L + +MLS + + E + +P+
Sbjct: 947 VEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE- 1005
Query: 484 SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIM--QKIAKGSL 541
DH+ L +Y W +Y W D+ + + M V+++R QL IM Q+++ S
Sbjct: 1006 ---SDHLTYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASC 1062
Query: 542 DVRANHIWKESRQDYRKLRKALCVGYANQLA--ERMIHHNGYRTLGFKPQLVQVHPSSEL 599
D+ +RK +C Y +Q A + + + RT G L HP+S L
Sbjct: 1063 GT-----------DWDIVRKCICAAYFHQAAKLKGIGEYVNIRT-GMPCHL---HPTSSL 1107
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
G P+Y+VYHEL+ T++ YM+ V AV+ +W+
Sbjct: 1108 FG--MGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL 1141
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 546 bits (1408), Expect = e-154, Method: Compositional matrix adjust.
Identities = 280/636 (44%), Positives = 409/636 (64%), Gaps = 30/636 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI ++ ++ + N +V+V+GETGSGK+TQL+Q LH GYT G+IG TQPRRVAA+
Sbjct: 532 LPIFAVQQELLTIIRDNSIVIVVGETGSGKTTQLTQYLHEDGYTDYGMIGCTQPRRVAAM 591
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+G LGEEVGYAIRFED TSE TLIKY+TDG+LLRE L DL YS II+
Sbjct: 592 SVAKRVSEEMGGNLGEEVGYAIRFEDCTSESTLIKYMTDGILLRESLREADLDHYSAIIM 651
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTD+L GL++ +V R S LK+++TSAT+D EK + FF N P ++PG+ +P
Sbjct: 652 DEAHERSLNTDVLFGLLREVV-ARRSDLKLIVTSATMDAEKFASFFGNVPIFHIPGRTFP 710
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+IL SK Y+E+A+K ++ +H+ GD+LIFM GQ+DIE ++ + + L+
Sbjct: 711 VDILFSKTPQEDYVEAAVKQSLQVHLSGAPGDILIFMPGQEDIEVTSDQIVEHLEELENA 770
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ +LP++ LP ++Q ++F P R+ IV+TNIAETSLTVDG+++VID GY K
Sbjct: 771 PAL--AVLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKL 828
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ +NP GM +L + IS+ ANQR GRAGRT PG+C+RLY + Y +E L TVPEIQR
Sbjct: 829 KVFNPRIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQR 888
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++LA VL LKSL + D+ L+F F+DPP +++ +++ QL+++ A+D G +TS GR M
Sbjct: 889 TNLANVVLLLKSLGVQDL--LQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLM 946
Query: 424 AELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483
E PL+P+LS+ML+ + + GC S+ L + +MLS + + E + +P+
Sbjct: 947 VEFPLDPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPE- 1005
Query: 484 SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIM--QKIAKGSL 541
DH+ L +Y W +Y W D+ + + M V+++R QL IM Q+++ S
Sbjct: 1006 ---SDHLSYLNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIMVQQRMSLASC 1062
Query: 542 DVRANHIWKESRQDYRKLRKALCVGYANQLA--ERMIHHNGYRTLGFKPQLVQVHPSSEL 599
D+ +RK +C Y +Q A + + + RT G L HP+S L
Sbjct: 1063 GT-----------DWDIVRKCICAAYFHQAAKLKGIGEYVNIRT-GMPCHL---HPTSSL 1107
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
G P+Y+VYHEL+ T++ YM+ V AV+ +W+
Sbjct: 1108 FG--MGYTPDYIVYHELVMTTKEYMQCVTAVDGEWL 1141
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 545 bits (1404), Expect = e-154, Method: Compositional matrix adjust.
Identities = 274/639 (42%), Positives = 417/639 (65%), Gaps = 25/639 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ QY++ +++ + + V++++ ETGSGK+TQL Q LH GYTK I TQPRRVA
Sbjct: 417 SLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVA 476
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA+E+ VRLG+EVGY+IRFE+ TSE+T+IKYLTDG+LLRE L+ PDL+ YSVI
Sbjct: 477 AMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVI 536
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DEAHER+L+TDIL GLVK + R LK+LI+SAT+D EK S +F P VPG+
Sbjct: 537 IIDEAHERTLHTDILFGLVKDIARFRPD-LKVLISSATIDAEKFSAYFDEAPVFYVPGRR 595
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLD 241
YPV+I ++ + +Y+++A+ T + IH +P GD+L+F+TGQD+IE + +++ R L
Sbjct: 596 YPVDIYYTPQPEANYIQAAITTILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRIL- 654
Query: 242 EGSCMDAVIL-PLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
G + +IL P++ +LP E+Q ++F P PP R+ +++TNIAETS+T+DGV +VID G+
Sbjct: 655 -GKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGF 713
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
VKQ YNP +GM SL V S+ A+QR GRAGR PGKC+RLY Y++E VT PE
Sbjct: 714 VKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPE 773
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
IQR++L VL LKSL ++ N+L FDF+D P E+L +L+ LY + A++ G +T +G
Sbjct: 774 IQRTNLTNIVLLLKSLGIN--NLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLG 831
Query: 421 RTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRKHTPLE 479
R MAE P +P LS+ L+ ++++GC+ + L++ +ML ++L + K E +
Sbjct: 832 RQMAEFPTDPMLSKSLIASSKYGCVEEVLSIVSMLGEASSLFYRPKDKIMEADKARANFT 891
Query: 480 LPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKG 539
P GDH+ LL I+ W + D+ NW ++N LQ + + +D+R QL + +++
Sbjct: 892 QPG----GDHLTLLHIWNEWVDTDFSYNWARENFLQYKSLCRARDVRDQLANLCERV--- 944
Query: 540 SLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSEL 599
+++ N S + ++KA+ GY + A + YRT+ Q V +HPSS +
Sbjct: 945 EIELVTN-----SSESLDPIKKAITAGYFSNAARLDRSGDSYRTVKSN-QTVYIHPSSSV 998
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
+ P ++Y EL+ T++ Y R + ++ +W++ I
Sbjct: 999 AEKK----PKVIIYFELVLTTKEYCRQITEIQPEWLLEI 1033
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 541 bits (1394), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/637 (41%), Positives = 416/637 (65%), Gaps = 24/637 (3%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LP+ Y E +++ V + V++++GETGSGK+TQ+ Q LH G++K+G IG TQPRRVAA
Sbjct: 466 SLPVYPYREQLIDAVREYQVLIIVGETGSGKTTQIPQYLHEAGFSKTGKIGCTQPRRVAA 525
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA RVA+E+G +LG EVGY+IRFED TS++T+++Y+TDG+L+RE L+ PDL+ YSV+I
Sbjct: 526 MSVAARVAEEVGCKLGNEVGYSIRFEDCTSQKTVLQYMTDGMLVREFLTAPDLASYSVLI 585
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHER+L+TDIL GL+K + R LK+LI+SAT+D E+ S +F PT N+PG+ Y
Sbjct: 586 IDEAHERTLHTDILFGLLKDITRFRPD-LKLLISSATMDAERFSDYFDGAPTFNIPGRKY 644
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
V +++ YL++A+ T + IH+ EP GD+L+F+TGQ+++++ L+ + R L
Sbjct: 645 EVTTHYTQAPEADYLDAAVVTVLQIHITEPLGDILVFLTGQEEVDQAAEMLQTRTRGLG- 703
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ +I ++ +LP ++Q ++F P PPN R+ +++TNIAETSLT+DG++YVID G+ K
Sbjct: 704 TKIKELIITRIYSTLPTDLQAKIFEPTPPNARKVVLATNIAETSLTIDGIIYVIDPGFCK 763
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
Q+ +NP +GM SL + +S+ ANQR GRAGR PGKC+RL+ + + +E + T+PEIQ
Sbjct: 764 QKMFNPRTGMESLVITPVSRASANQRKGRAGRVAPGKCFRLFTAWAFDNELEENTIPEIQ 823
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R++L VL LKS+ ++D+ + FDF+DPP +++L AL+QLY + A+++ G +T +GR
Sbjct: 824 RTNLGNVVLLLKSMGINDL--MNFDFMDPPPAQTLIAALEQLYALGALNDRGQLTKLGRK 881
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
MAE P++P LS+M++ + ++ C + LT+ AMLS T+ L
Sbjct: 882 MAEFPVDPQLSKMIIASEKYKCSEEILTICAMLSVGNTIFYRPKDKAFAADAARKLFF-- 939
Query: 483 GSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLD 542
GDH+ L+ ++ W E Y V W +N +Q R M +D+R QL +++++ +
Sbjct: 940 -HPQGDHLTLMNVFNQWRESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERV---EIP 995
Query: 543 VRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNG-YRTLGFKPQLVQVHPSSELKT 601
+ +N D +RK + G+ A+ + +G +RT Q VQ+HPSS L
Sbjct: 996 LVSN------VDDTDSIRKCIASGFFYNSAK--LEKSGLFRTTKHN-QSVQIHPSSCLFQ 1046
Query: 602 DEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
P +VVYHEL+ T++ +MR + ++ W+ I
Sbjct: 1047 SP----PKWVVYHELVLTTKEFMRQIVEIQSSWLHEI 1079
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 540 bits (1391), Expect = e-152, Method: Compositional matrix adjust.
Identities = 280/694 (40%), Positives = 431/694 (62%), Gaps = 32/694 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP+ +++ V N +V++GETGSGK+TQ++Q L G++ G+IG TQPRRVAAV
Sbjct: 483 LPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAV 542
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RVA+E+G ++G +VGY IRFED T T IKY+TDG+L RE L +P++S YSVI+L
Sbjct: 543 SVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIML 602
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHER++ TD+L L+K+ ++ +LK+++TSATL+ K S++F NCP +N+PGK +P
Sbjct: 603 DEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFP 661
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
VE+L+S+ Y+E+AL IDIH+ E GD+L+F+TGQ++I+ L D++++L +
Sbjct: 662 VEVLYSQTPQMDYIEAALDCVIDIHINEGPGDILVFLTGQEEIDSCCEILYDRVKTLGD- 720
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
S + +ILP++ +LP E+Q ++F P P R+ + +TNIAETS+T+DG+ YV+D G+ K
Sbjct: 721 SIGELLILPVYSALPSEIQSKIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKI 780
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
YN +G+ L V IS+ QANQR GRAGRT PGKCYRLY + +++E L+ TVPEIQR
Sbjct: 781 NIYNARAGIEQLIVSPISQAQANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQR 840
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
+L+ ++L LK++ ++D+ LKFDF+DPP + +AL +LY + ++D+ G +T++G+ M
Sbjct: 841 QNLSHTILMLKAMGINDL--LKFDFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEM 898
Query: 424 AELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483
+ P++P+LSR L+ + + C + +T+ +MLS + + + E K P
Sbjct: 899 SLFPMDPTLSRSLLSSVDNQCSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKFHHP-- 956
Query: 484 SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLDV 543
+GDH+ LL +Y W + +Y + K N L R + +D++ Q+ I +KI L +
Sbjct: 957 --YGDHLTLLNVYTRWQQANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIG---LKL 1011
Query: 544 RANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELKTDE 603
+ H D +RK G+ A+R GY+T+ + V +HPSS L E
Sbjct: 1012 ISCH------SDPDLIRKTFVSGFFMNAAKRD-SQVGYKTINGGTE-VGIHPSSSLYGKE 1063
Query: 604 EGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKLSGGAGQMEEASEK 663
YV+YH ++ TSR YM V ++E QW++ + K AG E S K
Sbjct: 1064 Y----EYVMYHSIVLTSREYMSQVTSIEPQWLLEVAPHFYK---------AGDAESQSRK 1110
Query: 664 KLTDMPETEVNAAVVANDHKSRIQAARERFLARK 697
K +P A + S I+ +RER L K
Sbjct: 1111 KAKIIPLHNKFAKDQNSWRLSSIRQSRERALGIK 1144
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 526 bits (1356), Expect = e-148, Method: Compositional matrix adjust.
Identities = 277/670 (41%), Positives = 426/670 (63%), Gaps = 44/670 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI-IGVTQPRRVA 61
+LP+ + + +E V+++ V+++ GETGSGK+TQL Q L+ G+ + G IG TQPRRVA
Sbjct: 363 SLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVA 422
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA RVA E+G +LG +VGY+IRFED TSE+T++KY+TDG+LLRE L+ PDL+ YSV+
Sbjct: 423 AMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVM 482
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER+L+TDIL GLVK + R LK+LI+SATLD EK S FF + P +PG+
Sbjct: 483 MIDEAHERTLHTDILFGLVKDIARFRKD-LKLLISSATLDAEKFSSFFDDAPIFRIPGRR 541
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
+PV+I +++ Y+++A+ T + IH+ +P GD+L+F+TGQ++IE + L ++ ++L
Sbjct: 542 FPVDIYYTQAPEADYVDAAIVTIMQIHLTQPLPGDILVFLTGQEEIETVQEALMERSKAL 601
Query: 241 DEGSCMDAVI-LPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
GS + +I LP++ +LP ++Q ++F P P + R+ +++TNIAETS+T+DG+ YVID G
Sbjct: 602 --GSKIKELIPLPVYANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPG 659
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
+ KQ ++ SG+ L VV ISK ANQR GRAGRT PGKC+RLY + Y E + +P
Sbjct: 660 FSKQNSFDARSGVEHLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIP 719
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EIQR++L VL LKSL + D+ + FDFLDPP E+L AL+QLY + A++ G +T +
Sbjct: 720 EIQRTNLGNVVLMLKSLGIHDL--VHFDFLDPPPQETLVIALEQLYALGALNHRGELTKL 777
Query: 420 GRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKS----TEKKRKH 475
GR MAE P +P +S+M++ + ++ C + +T+AAMLS + R K+ + RK
Sbjct: 778 GRRMAEFPCDPCMSKMIIASEKYECSEEIVTIAAMLSCNAAVF-YRPKAQVIHADSARKG 836
Query: 476 TPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQK 535
S GDHI L+ +Y W E + W +N +Q R M +D+R QL ++++
Sbjct: 837 F------WSPAGDHITLMNVYNKWQESSFSQRWCVENYVQHRTMKRARDVRDQLVGLLER 890
Query: 536 IAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHP 595
+ I +S D K+RKA+ GY ++ ++ + Y+T+ K HP
Sbjct: 891 V----------EIETKSSTDTIKIRKAITAGYFYNVS-KLDNTGHYKTVKHK-HTTHPHP 938
Query: 596 SSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKLSGGAG 655
+S L + P +VVY EL+ TS+ +MR + +E W++ + K
Sbjct: 939 NSCLFEE----TPRWVVYFELVFTSKEFMREMSEIESGWLLEVAPHYYK---------GR 985
Query: 656 QMEEASEKKL 665
++E+A+ KK+
Sbjct: 986 ELEDATNKKM 995
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 522 bits (1345), Expect = e-147, Method: Compositional matrix adjust.
Identities = 266/633 (42%), Positives = 401/633 (63%), Gaps = 25/633 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LP E ++ + N V++V+GETGSGK+TQL+Q L+ GY ++G+IG TQPRRVAA+
Sbjct: 492 LPAFAVREQLLSVIRDNQVLIVVGETGSGKTTQLAQFLYEDGYHRNGMIGCTQPRRVAAM 551
Query: 64 SVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVIIL 123
SVA+RV++E+GVRLG VGY+IRFED T T+IKY+TDGVLLRE L +L YSVII+
Sbjct: 552 SVAKRVSEEMGVRLGSTVGYSIRFEDVTGPDTVIKYMTDGVLLRESLMQNNLEKYSVIIM 611
Query: 124 DEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLYP 183
DEAHERSLNTDIL+GL+K++++ R +K+L+TSAT++ +K S FF P +PG+ YP
Sbjct: 612 DEAHERSLNTDILMGLLKKVLS-RRRDIKLLVTSATMNSQKFSDFFGGAPQFTIPGRTYP 670
Query: 184 VEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDEG 243
V+I+ +K + Y+E+A++ + IH+ +P GD+L+FMTGQ+DIE + D++ L +
Sbjct: 671 VDIMFAKAPCSDYVEAAVRQVLQIHLSQPAGDILVFMTGQEDIEATCEIIADRLNQLHDA 730
Query: 244 SCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQ 303
+ ILP++ +P ++Q ++F P R+ +V+TNIAETSLTV G+ YV+D GY K
Sbjct: 731 PRLS--ILPIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKL 788
Query: 304 RQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQR 363
+ YN G+ +L V IS+ ANQR GRAGRT PG YRLY Y E + T+PEIQR
Sbjct: 789 KMYNSKLGIDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQR 848
Query: 364 SSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTM 423
++L+ +VL LKSL + +I+ FDF+D P +++L +L +L+ + A+D G +T++G+ M
Sbjct: 849 TNLSNTVLILKSLGVEEIS--DFDFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKM 906
Query: 424 AELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDG 483
+ P++PSLS++++ A ++ C + +T+ +MLS + + ++ E +P+
Sbjct: 907 SLFPMDPSLSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAREKFNVPE- 965
Query: 484 SGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLDV 543
DH+ LL IY+ W Y +W + L + + +DIR+QL +IM K
Sbjct: 966 ---SDHLMLLNIYQHWQRNGYSNSWCSKHFLHSKTLKRARDIRQQLVEIMSK-------- 1014
Query: 544 RANHIWKESRQDYRKLRKALCVGYANQLA-ERMIHHNGYRTLGFKPQLVQVHPSSELKTD 602
I ES D+ +R+ LC Y +Q A + I + G L H +S L
Sbjct: 1015 --QKISLESVSDWDIVRRVLCSAYFHQAACAKGIGEYVHLRSGMPCHL---HVTSSLYG- 1068
Query: 603 EEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
G LP+YV+YHEL+ TS+ YM V +V+ W+
Sbjct: 1069 -LGYLPDYVIYHELVLTSKEYMNIVTSVDPYWL 1100
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 511 bits (1317), Expect = e-144, Method: Compositional matrix adjust.
Identities = 271/650 (41%), Positives = 409/650 (62%), Gaps = 35/650 (5%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQIL------HRHGYTKSGIIGVTQ 56
+LP+ ++ + T+ N ++++GETGSGK+TQ+ Q + + ++G TQ
Sbjct: 64 DLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQ 123
Query: 57 PRRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLS 116
PRRVAA+SV+RRVA E+ V +GEEVGY+IRFED TS RT++KYLTDG+LLRE +++P L
Sbjct: 124 PRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLE 183
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
Y VIILDEAHER+L TD+L GL+K ++ R LK+++ SATL+ EK ++FS P +
Sbjct: 184 RYKVIILDEAHERTLATDVLFGLLKEVLRNRPD-LKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 177 VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
VPG+L+PVEI +++E YLE+A++T + IH+ EP GD+L+F+TG+++IE K+ +
Sbjct: 243 VPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACRKINKE 302
Query: 237 IRSLDEGSCMDAV-ILPLHGSLPPEMQVRVFSPPP-------PNCRRFIVSTNIAETSLT 288
+ +L G + V ++PL+ +LPP MQ ++F P P P R+ +VSTNIAETSLT
Sbjct: 303 VSNL--GDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAETSLT 360
Query: 289 VDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTV 348
+DG+VYVID G+ KQ+ YNP + SL V ISK A+QR GRAGRTRPGKC+RLY
Sbjct: 361 IDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYTEKS 420
Query: 349 YHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID 408
++++ T PEI RS+LA +VL LK L + D+ + FDF+DPP+ E+L AL+ L +
Sbjct: 421 FNNDLQPQTYPEILRSNLANTVLTLKKLGIDDL--VHFDFMDPPAPETLMRALEVLNYLG 478
Query: 409 AIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKS 468
A+D+ G++T G M+E PL+P +S+ML+ + EF C ++ L+V+AMLS + R +
Sbjct: 479 ALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFV--RPRE 536
Query: 469 TEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQ 528
+K G GDH+ LL +Y + + + D NW +N + R M ++R+Q
Sbjct: 537 AQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQ 594
Query: 529 LCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKP 588
L +IM + N SR Y +RKA+ GY Q+A + G+
Sbjct: 595 LVRIMSRFNLKMCSTDFN-----SRDYYVNIRKAMLAGYFMQVAH--LERTGHYLTVKDN 647
Query: 589 QLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
Q+V +HPS+ L P +V+Y+E + T+R ++R V + +W++ +
Sbjct: 648 QVVHLHPSNCLDHK-----PEWVIYNEYVLTTRNFIRTVTDIRGEWLVDV 692
>sp|Q20875|DHX15_CAEEL Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
F56D2.6 OS=Caenorhabditis elegans GN=F56D2.6 PE=2 SV=1
Length = 739
Score = 510 bits (1313), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/669 (42%), Positives = 414/669 (61%), Gaps = 53/669 (7%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQ--------ILHRHGYTKSGIIG 53
+ LP+ +Y+E +E + N + ++GETGSGK+TQ+ Q ++ ++
Sbjct: 74 SQLPVWEYKEKFMELLRNNQCITLVGETGSGKTTQIPQWAVEFMKQQQQGQPPGQARLVA 133
Query: 54 VTQPRRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNP 113
TQPRRVAA+SVA RVA+E+ V LG+EVGY+IRFED SERT++KY TDG+LLRE +++P
Sbjct: 134 CTQPRRVAAMSVATRVAEEMDVVLGQEVGYSIRFEDCISERTVLKYCTDGMLLREAMNSP 193
Query: 114 DLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCP 173
L Y V+ILDEAHER+L TDIL+GL+K +V RA +K++I SATLD K ++F +CP
Sbjct: 194 LLDKYKVLILDEAHERTLATDILMGLIKEIVRNRAD-IKVVIMSATLDAGKFQRYFEDCP 252
Query: 174 TLNVPGKLYPVEILHSKERPTSYLESALKTAIDIH-VREPEGDVLIFMTGQDDIEKLVSK 232
L+VPG+ +PVEI + YLE+A++T I IH V E EGD+L+F+TGQ++IE+ +
Sbjct: 253 LLSVPGRTFPVEIFFTPNAEKDYLEAAIRTVIQIHMVEEVEGDILLFLTGQEEIEEACKR 312
Query: 233 LEDKIRSL--DEG--SCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNI 282
++ +I++L D G SC +PL+ +LPP Q R+F P PPN R+ ++STNI
Sbjct: 313 IDREIQALGADAGALSC-----IPLYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNI 367
Query: 283 AETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYR 342
AETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QR GRAGRT+PGKC+R
Sbjct: 368 AETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFR 427
Query: 343 LYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALK 402
LY T Y E D T PEI RS+L VL LK L D+ + FDF+DPP+ E+L AL+
Sbjct: 428 LYTETAYGSEMQDQTYPEILRSNLGSVVLQLKKLGTEDL--VHFDFMDPPAPETLMRALE 485
Query: 403 QLYLIDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSA-ETTL 461
L + AI+++G +T +G MAE PL+P L++ML+ + E C ++ L++ AMLS + +
Sbjct: 486 LLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWV 545
Query: 462 LPG--RSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGM 519
P R+++ E K + ++ GDH+ LL +Y + + D W DN + R M
Sbjct: 546 RPNEMRTEADEAKARFAHID-------GDHLTLLNVYHSFKQNQEDPQWCYDNFINYRTM 598
Query: 520 MFVKDIRKQLCQIMQK--IAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIH 577
+R QL ++M K + + S D + SR Y +RKAL G+ Q+A +
Sbjct: 599 KTADTVRTQLSRVMDKYNLRRVSTDFK-------SRDYYLNIRKALVAGFFMQVAH--LE 649
Query: 578 HNGYRTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMP 637
+G+ QLV +HPS+ L P + +Y+E + T++ ++R V V +W++
Sbjct: 650 RSGHYVTVKDNQLVNLHPSTVLDHK-----PEWALYNEFVLTTKNFIRTVTDVRPEWLLQ 704
Query: 638 ILKKLEKID 646
I + +D
Sbjct: 705 IAPQYYDLD 713
>sp|P53131|PRP43_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP43 PE=1 SV=1
Length = 767
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 277/648 (42%), Positives = 415/648 (64%), Gaps = 32/648 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQ--ILHRHGYTKSGIIGVTQPRRVA 61
LP+ + ++ + N ++V +GETGSGK+TQ+ Q + + ++ + TQPRRVA
Sbjct: 93 LPVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFVLFDEMPHLENTQVACTQPRRVA 152
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA+RVA+E+ V+LGEEVGY+IRFE++TS +T++KY+TDG+LLRE + + DLS YS I
Sbjct: 153 AMSVAQRVAEEMDVKLGEEVGYSIRFENKTSNKTILKYMTDGMLLREAMEDHDLSRYSCI 212
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+L TDIL+GL+K++V R LKI+I SATLD EK ++F++ P L VPG+
Sbjct: 213 ILDEAHERTLATDILMGLLKQVVK-RRPDLKIIIMSATLDAEKFQRYFNDAPLLAVPGRT 271
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLE-DKIRSL 240
YPVE+ ++ E YL+SA++T + IH E GD+L+F+TG+D+IE V K+ + + +
Sbjct: 272 YPVELYYTPEFQRDYLDSAIRTVLQIHATEEAGDILLFLTGEDEIEDAVRKISLEGDQLV 331
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN-----CRRFIVSTNIAETSLTVDGVVYV 295
E C + PL+GSLPP Q R+F P P + R+ ++STNIAETSLT+DG+VYV
Sbjct: 332 REEGCGPLSVYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYV 391
Query: 296 IDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLD 355
+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E ++
Sbjct: 392 VDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIE 451
Query: 356 VTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGS 415
+ PEI RS+L+ +VL LK L + D+ + FDF+DPP+ E++ AL++L + +D+ G+
Sbjct: 452 QSYPEILRSNLSSTVLELKKLGIDDL--VHFDFMDPPAPETMMRALEELNYLACLDDEGN 509
Query: 416 ITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRK 474
+T +GR ++ PL+P L+ ML+ + EF C + LT+ AMLS + P + K K
Sbjct: 510 LTPLGRLASQFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAK 569
Query: 475 HTPLELPDGSGWGDHIQLLQIYECW--DEC-DYDVN-WVKDNGLQVRGMMFVKDIRKQLC 530
+ PD GDHI LL +Y + DE +Y ++ W +D+ L R + +IR QL
Sbjct: 570 NI-FAHPD----GDHITLLNVYHAFKSDEAYEYGIHKWCRDHYLNYRSLSAADNIRSQLE 624
Query: 531 QIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQL 590
++M + ++ N ES + + +RKAL G+ Q+A++ GY T+ Q
Sbjct: 625 RLMNR-----YNLELNTTDYESPKYFDNIRKALASGFFMQVAKKRSGAKGYITVK-DNQD 678
Query: 591 VQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
V +HPS+ L D E +V+Y+E + TS+ Y+R V +V +W++ I
Sbjct: 679 VLIHPSTVLGHDAE-----WVIYNEFVLTSKNYIRTVTSVRPEWLIEI 721
>sp|Q54NJ4|DHX15_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15
OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1
Length = 727
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 273/638 (42%), Positives = 400/638 (62%), Gaps = 29/638 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVAA 62
LP+ + +E ++ +++N VV+++GETGSGK+TQ+ Q + G + G ++GVTQPRRVAA
Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAA 136
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RV++E+ LGEEVGY+IRFE+ +S RT +KYLTDG+LLRE +S+P L+ Y VII
Sbjct: 137 ISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVII 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L+TDIL GL+K ++ R LK+++ SATL+ K K+F N P + VPG+L+
Sbjct: 197 LDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLH 255
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PVEI +++E YLESA++T IDIH E GD+L+F+TG+++IE +K++ + R E
Sbjct: 256 PVEIFYTEEAAKDYLESAVRTVIDIHTNEGTGDILVFLTGEEEIEDTCAKIQRETR---E 312
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNC--RRFIVSTNIAETSLTVDGVVYVIDCGY 300
LPL+ SLP Q ++F C R+ IVSTNIAETSLT+DG+V+V+D G+
Sbjct: 313 RGLPPMKTLPLYSSLPIYQQSKIFD----TCKERKCIVSTNIAETSLTIDGIVFVVDPGF 368
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
KQ+ YNP S + SL V ISK ANQR GRAGRTRPGKC+RLY + + + T PE
Sbjct: 369 SKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTRPGKCFRLYTEKAFKELMIQQTHPE 428
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
I RS+LA VL L L L ++++ FDF+DPP ++L AL+ L+ + A+D+ G +T IG
Sbjct: 429 ILRSNLASVVLQL--LKLGVVDLVHFDFMDPPVPDTLIRALEVLHYLGALDDEGQLTEIG 486
Query: 421 RTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLEL 480
M+E PL+P LS+ML+ + E C ++ LT+AAMLSA + + E +
Sbjct: 487 SIMSEFPLDPQLSKMLIVSAERSCSNEILTIAAMLSAPNCFMRPKDNRIEADSAKKSFDH 546
Query: 481 PDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGS 540
D GDH+ +L +Y + + D W DN L R + +R QL +I+ +
Sbjct: 547 FD----GDHLTMLNVYHSFKKNGEDPTWCYDNFLNHRAIKQADSVRSQLARILTRFKLPL 602
Query: 541 LDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHPSSELK 600
+ N S+ Y ++K + G+ Q+A + N Y TLG Q V HPS+ L
Sbjct: 603 VSGDVN-----SKFYYENIKKCIAAGFFMQVA-KCEKKNIYFTLG-DEQSVIFHPSTGLT 655
Query: 601 TDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
P + +Y+E + TS Y+R + V+ W++ +
Sbjct: 656 RR-----PEFCIYNEFVLTSENYIRTITDVKFDWLLEL 688
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 508 bits (1308), Expect = e-143, Method: Compositional matrix adjust.
Identities = 277/667 (41%), Positives = 412/667 (61%), Gaps = 35/667 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQIL--HRHGYTKSGIIGVTQPRRVA 61
LP+ Q E ++ +N ++V +GETGSGK+TQ+ Q + + + I TQPRRVA
Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNTQIACTQPRRVA 134
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+SVA+RVA E+ V LGEEVGY IRFED + TL+KY+TDG+LLRE +++ LS YS I
Sbjct: 135 AMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCI 194
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
ILDEAHER+L TDIL+GL+KRL R LKI++ SATLD +K K+F + P L VPG+
Sbjct: 195 ILDEAHERTLATDILMGLMKRLAT-RRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRT 253
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL----EDKI 237
YPVEI +++E YLE+AL+T + IHV E GD+L+F+TG+++IE K+ +D +
Sbjct: 254 YPVEIYYTQEPERDYLEAALRTVLQIHVEEGPGDILVFLTGEEEIEDACRKITLEADDLV 313
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNC-----RRFIVSTNIAETSLTVDGV 292
R EG+ + PL+GSLPP Q R+F P P + R+ ++STNIAETSLT+DG+
Sbjct: 314 R---EGAAGPLKVYPLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGI 370
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
VYV+D G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY + E
Sbjct: 371 VYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKE 430
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
++ T PEI RS+L+ +VL LK L + D+ + FD++DPP+ E++ AL++L ++ +D+
Sbjct: 431 LIEQTYPEILRSNLSSTVLELKKLGIDDL--VHFDYMDPPAPETMMRALEELNYLNCLDD 488
Query: 413 NGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKK 472
NG +T +GR +E PL+P+L+ ML+ + EF C ++ L++ A+LS + S
Sbjct: 489 NGDLTPLGRKASEFPLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARKLAD 548
Query: 473 RKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQI 532
PD GDH+ LL +Y + + +W ++ L R ++ ++RKQL +
Sbjct: 549 EMRQQFTHPD----GDHLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRT 604
Query: 533 MQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQ 592
M++ +V + + Y +R+AL G+ Q+A++ + Y T+ Q+V
Sbjct: 605 MER-----QEVELISTPFDDKNYYVNIRRALVSGFFMQVAKKSANGKNYVTMK-DNQVVS 658
Query: 593 VHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVM---PILKKLEKIDINK 649
+HPS L + P +VVY+E + T++ ++RNV A+ +W++ P L+ D NK
Sbjct: 659 LHPSCGL-----SVTPEWVVYNEFVLTTKSFIRNVTAIRPEWLIELAPNYYDLDDFDNNK 713
Query: 650 LSGGAGQ 656
A Q
Sbjct: 714 EVKSALQ 720
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/645 (42%), Positives = 408/645 (63%), Gaps = 30/645 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRRV 60
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRRV
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 AAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
AA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKR 473
G +T +G MAE PL+P L++M++ + ++ C ++ L++ AMLS + + TE K+
Sbjct: 553 GDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFV----RPTEAKK 608
Query: 474 KHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIM 533
++ GDH+ LL +Y + + V W DN + R +M ++R+QL +IM
Sbjct: 609 AADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 534 QKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQV 593
+ +L R+ SR Y +RKAL GY Q+A + G+ Q+VQ+
Sbjct: 669 DRF---NLPRRSTDF--TSRDYYINIRKALVTGYFMQVAH--LERTGHYLTVKDNQVVQL 721
Query: 594 HPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
HPS+ L P +V+Y+E + T++ Y+R ++ +W++ I
Sbjct: 722 HPSTVLDHK-----PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI 761
>sp|O43143|DHX15_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Homo sapiens GN=DHX15 PE=1 SV=2
Length = 795
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/645 (42%), Positives = 408/645 (63%), Gaps = 30/645 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRRV 60
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRRV
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 AAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
AA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKR 473
G +T +G MAE PL+P L++M++ + ++ C ++ L++ AMLS + + TE K+
Sbjct: 553 GDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFV----RPTEAKK 608
Query: 474 KHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIM 533
++ GDH+ LL +Y + + V W DN + R +M ++R+QL +IM
Sbjct: 609 AADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 534 QKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQV 593
+ +L R+ SR Y +RKAL GY Q+A + G+ Q+VQ+
Sbjct: 669 DRF---NLPRRSTDF--TSRDYYINIRKALVTGYFMQVAH--LERTGHYLTVKDNQVVQL 721
Query: 594 HPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
HPS+ L P +V+Y+E + T++ Y+R ++ +W++ I
Sbjct: 722 HPSTVLDHK-----PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI 761
>sp|O35286|DHX15_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Mus musculus GN=Dhx15 PE=2 SV=2
Length = 795
Score = 507 bits (1306), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/645 (42%), Positives = 408/645 (63%), Gaps = 30/645 (4%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI---IGVTQPRRV 60
LP+ +Y++ + + ++ V++GETGSGK+TQ+ Q + + G + TQPRRV
Sbjct: 137 LPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRV 196
Query: 61 AAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSV 120
AA+SVA+RVA E+ V LG+EVGY+IRFED +S +T++KY+TDG+LLRE +++P L Y V
Sbjct: 197 AAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGV 256
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
IILDEAHER+L TDIL+G++K +V R S LK+++ SATLD K +F NCP L +PG+
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQR-SDLKVIVMSATLDAGKFQIYFDNCPLLTIPGR 315
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHV-REPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
+PVEI ++ E YLE+A++T I IH+ E EGD+L+F+TGQ++I++ +++ ++
Sbjct: 316 THPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDD 375
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN------CRRFIVSTNIAETSLTVDGVV 293
L D I+PL+ +LPP+ Q R+F PPPP R+ +VSTNIAETSLT+DGVV
Sbjct: 376 LGP-EVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVV 434
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
+VID G+ KQ+ YNP + SL V ISK A QR GRAGRTRPGKC+RLY Y E
Sbjct: 435 FVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEM 494
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDEN 413
D T PEI RS+L VL LK L + D+ + FDF+DPP+ E+L AL+ L + A++++
Sbjct: 495 QDNTYPEILRSNLGSVVLQLKKLGIDDL--VHFDFMDPPAPETLMRALELLNYLAALNDD 552
Query: 414 GSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKR 473
G +T +G MAE PL+P L++M++ + ++ C ++ L++ AMLS + + TE K+
Sbjct: 553 GDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFV----RPTEAKK 608
Query: 474 KHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIM 533
++ GDH+ LL +Y + + V W DN + R +M ++R+QL +IM
Sbjct: 609 AADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIM 668
Query: 534 QKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQV 593
+ +L R+ SR Y +RKAL GY Q+A + G+ Q+VQ+
Sbjct: 669 DRF---NLPRRSTDF--TSRDYYINIRKALVTGYFMQVAH--LERTGHYLTVKDNQVVQL 721
Query: 594 HPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
HPS+ L P +V+Y+E + T++ Y+R ++ +W++ I
Sbjct: 722 HPSTVLDHK-----PEWVLYNEFVLTTKNYIRTCTDIKPEWLVKI 761
>sp|Q6PE54|DHX40_MOUSE Probable ATP-dependent RNA helicase DHX40 OS=Mus musculus GN=Dhx40
PE=2 SV=1
Length = 779
Score = 501 bits (1289), Expect = e-140, Method: Compositional matrix adjust.
Identities = 285/730 (39%), Positives = 433/730 (59%), Gaps = 44/730 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
PI + + +++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+LS +SVII
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLSKFSVII 171
Query: 123 LDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 179 GKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 233 LEDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
L S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LT+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
+ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 412 EFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQ 469
Query: 407 IDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL---- 462
DAID +G +T +G +M E PL P L+ ++ A C L +AAMLS E +
Sbjct: 470 CDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVD 529
Query: 463 PGRSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFV 522
P K E+ +H L G G+ D L I+E +W + + + R +
Sbjct: 530 PEYQKEAEQ--RHRELAAKAG-GFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSA 586
Query: 523 KDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYR 582
+ QL ++++K+ + S R + LR+ LC GY +A R + +
Sbjct: 587 FRVEAQLRELIRKLKQQSDFPRETF----EGPKHEVLRRCLCAGYFKNVARRSVGRT-FC 641
Query: 583 TLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKL 642
T+ + V +HPSS L E L ++++HE++ T++ Y R VC + +WV +L KL
Sbjct: 642 TMDGRGSPVHIHPSSALHEQETKL--EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKL 699
Query: 643 EKIDINKLSGGA-GQMEEASEKKLTDMPETE-----VNAAVVA-----NDHKSRIQAARE 691
+++ + LS A +M E + +K T+ + ++ V+ ND KS I AR
Sbjct: 700 HELNAHDLSSVARREMREDARRKWTNKENVKQLKDGISKEVLKKMQRRNDDKS-ISDARA 758
Query: 692 RFLARKPNKL 701
RFL RK ++
Sbjct: 759 RFLERKQQRI 768
>sp|Q5XI69|DHX40_RAT Probable ATP-dependent RNA helicase DHX40 OS=Rattus norvegicus
GN=Dhx40 PE=2 SV=1
Length = 779
Score = 500 bits (1287), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/730 (38%), Positives = 434/730 (59%), Gaps = 44/730 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
PI + + +++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA
Sbjct: 52 TFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVII
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVII 171
Query: 123 LDEAHERSLNTDILLGLVKRLVN----LRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 179 GKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 233 LEDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
L S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LT+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQ 469
Query: 407 IDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL---- 462
DAID +G +T +G +M E PL P L+ ++ A C L +AAMLS E +
Sbjct: 470 CDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVD 529
Query: 463 PGRSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFV 522
P K E+ KH L G G+ D L I+E +W + + + R +
Sbjct: 530 PEYQKEAEQ--KHRELAAKAG-GFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSA 586
Query: 523 KDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYR 582
+ QL ++++K+ + S R + LR+ LC GY +A R + +
Sbjct: 587 FRVEAQLRELIRKLKQQSDFPRETF----EGPKHEVLRRCLCAGYFKNVARRSVGRT-FC 641
Query: 583 TLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKL 642
T+ + V +HPSS L E L ++++HE++ T++ Y R VC + +WV +L KL
Sbjct: 642 TMDGRGSPVHIHPSSALHEQETKL--EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKL 699
Query: 643 EKIDINKLSGGA-GQMEEASEKKLTDMPETE-----VNAAVVA-----NDHKSRIQAARE 691
+++ + LS A +M + + +K T+ + ++ V+ ND KS I AR
Sbjct: 700 HELNAHDLSSVARREMRDDARRKWTNKENVKQLKDGISKEVLKKMQRRNDDKS-ISDARA 758
Query: 692 RFLARKPNKL 701
RFL RK ++
Sbjct: 759 RFLERKQQRI 768
>sp|Q8IX18|DHX40_HUMAN Probable ATP-dependent RNA helicase DHX40 OS=Homo sapiens GN=DHX40
PE=1 SV=2
Length = 779
Score = 498 bits (1283), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/731 (38%), Positives = 436/731 (59%), Gaps = 48/731 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
PI + + I++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVII
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 123 LDEAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 179 GKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 233 LEDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
L S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LT+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSK 411
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQ 469
Query: 407 IDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL---- 462
DAID +G +T +G +M E PL P L+ +++A C L +AAMLS E +
Sbjct: 470 CDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVD 529
Query: 463 PGRSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFV 522
P K E+ +H L G G+ D L I+E +W + + + R +
Sbjct: 530 PEYQKEAEQ--RHRELAAKAG-GFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSA 586
Query: 523 KDIRKQLCQIMQKIAKGSLDVRANHIWKESRQ--DYRKLRKALCVGYANQLAERMIHHNG 580
+ QL ++++K+ + S KE+ + + LR+ LC GY +A R +
Sbjct: 587 FRVEAQLRELIRKLKQQS------DFPKETFEGPKHEVLRRCLCAGYFKNVARRSVGRT- 639
Query: 581 YRTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILK 640
+ T+ + V +HPSS L E L ++++HE++ T++ Y R VC + +WV +L
Sbjct: 640 FCTMDGRGSPVHIHPSSALHEQETKL--EWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP 697
Query: 641 KLEKIDINKLSGGA-GQMEEASEKKLTDMPETE-----VNAAVVA-----NDHKSRIQAA 689
KL + + + LS A ++ E + ++ T+ + ++ V+ ND KS I A
Sbjct: 698 KLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGISKDVLKKMQRRNDDKS-ISDA 756
Query: 690 RERFLARKPNK 700
R RFL RK +
Sbjct: 757 RARFLERKQQR 767
>sp|Q5R864|DHX40_PONAB Probable ATP-dependent RNA helicase DHX40 OS=Pongo abelii GN=DHX40
PE=2 SV=1
Length = 779
Score = 498 bits (1282), Expect = e-140, Method: Compositional matrix adjust.
Identities = 284/729 (38%), Positives = 433/729 (59%), Gaps = 44/729 (6%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
PI + + I++ V N ++V G TGSGK+TQL + L+ G+++ G+IGVTQPR+VAA
Sbjct: 52 TFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAA 111
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+SVA+RVA+E+ LG +VGY +RF+D +S+ T IKY+TDG LL+ IL +P+L+ +SVII
Sbjct: 112 ISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLTKFSVII 171
Query: 123 LDEAHERSLNTDILLGLVKRLVNL----RASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+L TDIL GL+K+L R LK+++ SAT++ K+S FF NCP ++P
Sbjct: 172 LDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIP 231
Query: 179 GKLYPVE-----ILHSKERP-TSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
G+LYPV ++ ++R T+Y+++ +K +DIH+ E GD+L+F+TGQ +IEK
Sbjct: 232 GRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCEL 291
Query: 233 LEDKIRSLD-----EGSCMDA-VILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETS 286
L S+D + + +D +ILP +GS+ + Q R+F PPPP R+ ++STNI+ TS
Sbjct: 292 LFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATS 351
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
LT+DG+ YV+D G+VKQ +NP G+ L+VV ISK +A QR GRAGRT GKC+R+Y
Sbjct: 352 LTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSK 411
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
++ D +PEI+R+SL VL LK L + D V++F +LDPP+ + +ALKQLY
Sbjct: 412 DFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHD--VIRFPYLDPPNERLILEALKQLYQ 469
Query: 407 IDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL---- 462
DAID +G +T +G +M E PL P L+ +++A C L +AAMLS E +
Sbjct: 470 CDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCEDLLLPIAAMLSVENVFIRPVD 529
Query: 463 PGRSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFV 522
P K E+ +H L G G+ D L I+E +W + + + R +
Sbjct: 530 PEYQKEAEQ--RHRELAAKAG-GFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSA 586
Query: 523 KDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYR 582
+ QL ++++K+ + S R + LR+ LC GY +A R + +
Sbjct: 587 FRVEAQLRELIRKLKQQSDFPRETF----EGPKHEVLRRCLCAGYFKNVARRSVGRT-FC 641
Query: 583 TLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKL 642
T+ + V +HPSS L E L ++V+HE++ T++ Y R VC + +WV +L KL
Sbjct: 642 TMDGRGSPVHIHPSSALHEQETKL--EWIVFHEVLVTTKVYARIVCPIRYEWVRDLLPKL 699
Query: 643 EKIDINKLSGGA-GQMEEASEKKLTDMPETE-----VNAAVVA-----NDHKSRIQAARE 691
+ + + LS A ++ E + ++ T+ + ++ V+ ND KS I AR
Sbjct: 700 HEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGISKDVLKKMQRRNDDKS-ISDARA 758
Query: 692 RFLARKPNK 700
RFL RK +
Sbjct: 759 RFLERKQQR 767
>sp|P20095|PRP2_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
PRP2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PRP2 PE=1 SV=1
Length = 876
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 261/667 (39%), Positives = 414/667 (62%), Gaps = 51/667 (7%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGI--IGVTQPRRVA 61
LP+ QY++ +++ +++N V++++GETGSGK+TQL Q L G+T G I +TQPRRVA
Sbjct: 223 LPVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQGKLQIAITQPRRVA 282
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTS-ERTLIKYLTDGVLLREILSNPDLSPYSV 120
A SVA RVA E+ V LG+EVGY IRFED+T+ +T++KY+TDG+LLRE L++ LS YS
Sbjct: 283 ATSVAARVADEMNVVLGKEVGYQIRFEDKTTPNKTVLKYMTDGMLLREFLTDSKLSKYSC 342
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
I++DEAHER+L TDIL+GL+K ++ R + LK+LI+SAT++ +K S+FF NCP NVPG+
Sbjct: 343 IMIDEAHERTLATDILIGLLKDILPQRPT-LKLLISSATMNAKKFSEFFDNCPIFNVPGR 401
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREP-EGDVLIFMTGQDDIEKLVSKLEDKIRS 239
YPV+I ++ + +Y+ +A+ T IH + GD+L+F+TGQ++IE+ +KLE+ +
Sbjct: 402 RYPVDIHYTLQPEANYIHAAITTIFQIHTTQSLPGDILVFLTGQEEIERTKTKLEEIMSK 461
Query: 240 LDEGS-CMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDC 298
L GS +I P++ +LP E Q+++F P P NCR+ +++TNIAETSLT+DG+ YVID
Sbjct: 462 L--GSRTKQMIITPIYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDP 519
Query: 299 GYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTV 358
G+VK+ Y PS+GM L V S+ +QR GRAGR PGKC+R++ Y E +
Sbjct: 520 GFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPK 579
Query: 359 PEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITS 418
PEI R++L+ +VL L SL ++D+ +KF +D PS +L +L+ LY++ A++ G+IT
Sbjct: 580 PEITRTNLSNTVLLLLSLGVTDL--IKFPLMDKPSIPTLRKSLENLYILGALNSKGTITR 637
Query: 419 IGRTMAELPLEPSLSRMLMEANEF----GCLSQALTVAAMLSAETTLLPGRSKSTEKKRK 474
+G+ M E P EP +++L A G L + LT+ +ML +L G +KR
Sbjct: 638 LGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLTIVSMLHETPSLFIG------QKRD 691
Query: 475 HTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQ 534
L + DHI L+I+ W + +W +D+ +Q + M+ V++IR QL + +
Sbjct: 692 AAASVLSEVE--SDHILYLEIFNQWRNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSE 749
Query: 535 KIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAER-----------MIHHNGYRT 583
K+ G ++ + D +++ GY N R + GY+T
Sbjct: 750 KV--GLVE----------KNDQARMKIGNIAGYINARITRCFISGFPMNIVQLGPTGYQT 797
Query: 584 LGFKPQ--LVQVHPSSELKTD--EEGLLPN-YVVYHELIATSRPYMRNVCAV-EMQWVMP 637
+G V VHP+S L + E+ P+ YV+Y +L+ TS+ ++R+ + + +W++
Sbjct: 798 MGRSSGGLNVSVHPTSILFVNHKEKAQRPSKYVLYQQLMLTSKEFIRDCLVIPKEEWLID 857
Query: 638 ILKKLEK 644
++ ++ K
Sbjct: 858 MVPQIFK 864
>sp|P15938|PRP16_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP16 PE=1 SV=2
Length = 1071
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/648 (42%), Positives = 398/648 (61%), Gaps = 36/648 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT--KSGIIGVTQPRRVA 61
LP+ + ++ + +N VVV+IGETGSGK+TQL+Q L+ GY + I VTQPRRVA
Sbjct: 350 LPVFRCRSQLLSLIRENQVVVIIGETGSGKTTQLAQYLYEEGYANDRGKSIVVTQPRRVA 409
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRT-SERTLIKYLTDGVLLREILSNPDLSPYSV 120
A+SVA+RVA E+ V LG+EVGY+IRFED T SE T +K++TDG+LLRE L + L YS
Sbjct: 410 AISVAKRVAMEMQVPLGKEVGYSIRFEDVTDSECTKLKFVTDGILLRETLLDDTLDKYSC 469
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGK 180
+I+DEAHERSLNTDILLG K L+ R LK++ITSAT++ +K S FF N P +PG+
Sbjct: 470 VIIDEAHERSLNTDILLGFFKILL-ARRRDLKLIITSATMNAKKFSAFFGNAPQFTIPGR 528
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVRE--PEGDVLIFMTGQDDIEKLVSKLEDK-- 236
+PV+ +++ Y+E+A+ A+ IH+ GD+LIFMTGQ+DIE L++K
Sbjct: 529 TFPVQTIYTSNPVQDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFL 588
Query: 237 -IRSLDEGSCM-----DAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
+ S G+ D ILP++ +LP ++Q ++F R+ I++TNIAETSLT+
Sbjct: 589 QVYSKKFGTANFEEINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIK 648
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+ YVIDCGY K + YNP G+ SL + ISK A+QR GRAGRT PG YRLY +
Sbjct: 649 GIRYVIDCGYSKLKVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFK 708
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
++ T+PEIQR++L+ ++L LKSLD++D + KF F+D P ++ +L +L+ I AI
Sbjct: 709 EDMYLQTIPEIQRTNLSNTLLLLKSLDVTD-ELSKFPFIDKPPLQTFLSSLYELWFIGAI 767
Query: 411 DENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTE 470
D +G +T +G MA+ PL+PSLS++L+ A GC + LT+ +MLS + + E
Sbjct: 768 DTSGQLTPLGLQMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKE 827
Query: 471 KKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLC 530
+ DH+ LL ++E W ++ +W + +Q + ++ +DIR QL
Sbjct: 828 ADIARNKFFI----AKSDHLTLLNVFEQWRANNFSSHWCNKHFVQYKSLVRARDIRDQLL 883
Query: 531 QIM--QKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKP 588
I+ QKI S S +D+ ++K +C G+A+Q A ++ Y L
Sbjct: 884 TILKSQKIPVIS-----------SGKDWDIIKKCICSGFAHQ-AAKITGLRNYVHLKTGV 931
Query: 589 QLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVM 636
VQ+HP+S L G LP YVVYHEL+ TS+ Y+ V +V+ W+M
Sbjct: 932 S-VQLHPTSALHG--LGDLPPYVVYHELLMTSKEYICCVTSVDPFWLM 976
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 466 bits (1198), Expect = e-130, Method: Compositional matrix adjust.
Identities = 259/649 (39%), Positives = 399/649 (61%), Gaps = 38/649 (5%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVA 61
LP+ + I+ +E VV++GETG GKSTQ+ Q L G+T G ++GVTQPRRVA
Sbjct: 53 KLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVA 112
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSV 120
AV+VA RVA+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSV
Sbjct: 113 AVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSV 172
Query: 121 IILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS---------- 170
I+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 173 IMLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARD 231
Query: 171 NCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLV 230
C L V G+ +PV+I + + Y++S ++T + IH E +GDVL F+TGQ+++E +V
Sbjct: 232 TCVILTVEGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVV 291
Query: 231 SKLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
S L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 292 SMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITI 351
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 352 SGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF 411
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY +
Sbjct: 412 -DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGG 468
Query: 410 IDENGSITS-IGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKS 468
+D++ +T +G +AE PL P ++ML+E+ FGC + L++AAM+ + + ++
Sbjct: 469 LDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQK 528
Query: 469 TEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQ 528
+ R H + + GDH+ +L IYE + + + D W +++ L +G++ +R+Q
Sbjct: 529 SHAIRVHRKFAVEE----GDHLTMLNIYEAFIKHNKDSKWCQEHFLNYKGLVRAATVREQ 584
Query: 529 LCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVG-YANQLAERMIHHNGYRTLGFK 587
L +++ K K S D + + + G +AN A R YRT+
Sbjct: 585 LKKLLVKFQVPR---------KSSEGDPDLVLRCIVSGFFAN--AARFHSTGAYRTIRDD 633
Query: 588 PQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVM 636
+L +HP+S L ++ P +V+Y+E+I TS+ YMR+V A+E W++
Sbjct: 634 HEL-HIHPASVLYAEKP---PRWVIYNEVIQTSKYYMRDVTAIESAWLL 678
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/648 (39%), Positives = 400/648 (61%), Gaps = 38/648 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVAA 62
LP+ + I+ +E VV++GETG GKSTQ+ Q L G+T G ++GVTQPRRVAA
Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAA 113
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSE-RTLIKYLTDGVLLREILSNPDLSPYSVI 121
V+VA RVA+E G LG EVGY IRF+D T + T IK+LTDG+L+RE++ +P L+ YSVI
Sbjct: 114 VTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVI 173
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFS----------N 171
+LDEAHER+L TDI +GL+K++ R L++++ SATLD +K FF+
Sbjct: 174 MLDEAHERTLYTDIAIGLLKKIQKKRGD-LRLIVASATLDADKFRDFFNQNETSDPARDT 232
Query: 172 CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVS 231
C L V G+ +PV+I + + Y++S ++T + IH E +GD+L F+TGQ+++E +VS
Sbjct: 233 CVILTVGGRTFPVDIFYLQSPVPDYIKSTVETVVKIHQTEGDGDILAFLTGQEEVETVVS 292
Query: 232 KLEDKIRSLDE-GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVD 290
L ++ R+L G +LP++ LP Q++VF + R+ IV+TN+AETS+T+
Sbjct: 293 MLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITIS 352
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
G+VYVIDCG+VK R YNP + + L VV +S+ ANQR GR GR+R GKCYRLY +
Sbjct: 353 GIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAF- 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
D+ TVPE+QRS+LA +L LK+L + NVL+F F+ PP ++S+ AL+ LY + +
Sbjct: 412 DKLPQSTVPEMQRSNLAPVILQLKALGID--NVLRFHFMSPPPAQSMVQALELLYALGGL 469
Query: 411 DENGSITS-IGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKST 469
D++ +T +G +AE PL P ++ML+E+ FGC + L++AAM+ + + ++ +
Sbjct: 470 DKDCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKS 529
Query: 470 EKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQL 529
+ R H + + GDH+ +L +YE + + + + W +++ L +G++ +R+QL
Sbjct: 530 QAIRVHRKFAVEE----GDHLTMLNVYEAFIKHNKNSQWCQEHFLNYKGLVRAATVREQL 585
Query: 530 CQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVG-YANQLAERMIHHNGYRTLGFKP 588
+++ K K S D + + + G +AN A R YRT+
Sbjct: 586 KKLLVKFQVPK---------KSSEGDPDPVLRCIVSGFFAN--AARFHSTGAYRTIRDDH 634
Query: 589 QLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVM 636
+L +HP+S L ++ P +V+Y+E+I TS+ YMR+V A+E W++
Sbjct: 635 EL-HIHPASVLYAEKP---PRWVIYNEVIQTSKYYMRDVTAIESAWLL 678
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/643 (39%), Positives = 385/643 (59%), Gaps = 35/643 (5%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI + ++ + V+IGETGSGK+TQ+ Q L+ G ++ GII VTQPRRVAA
Sbjct: 64 SLPIFRARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 123
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+S+A RV+ E LG+ VGY +RFED TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 124 ISLATRVSDEKRTELGKLVGYTVRFEDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 183
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 184 LDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNRAPVLYLE 243
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P++I ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 244 GRQHPIQIFYTKQPQQDYLHAALVSVFQIHQEAPASQDILVFLTGQEEIEAMSKTCRDIA 303
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
R L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 304 RHLPDG-CPSMLVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 362
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 363 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFEKMT 421
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + +E A+ QL L+ A+ D+
Sbjct: 422 VPEIQRCNLASVILQLLAMKVP--NVLTFDFMSKPSPDHIEAAIAQLDLLGALEHKDDQL 479
Query: 415 SITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL--PGRSKSTEKK 472
++T IGR MA PLEP ++ ++ +++F C + LT+ ++LS ++ L P R +
Sbjct: 480 TLTPIGRKMAAFPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSV 539
Query: 473 RKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQI 532
RK S GDHI LL IY + + +W K+N + + M+ V ++R QL +I
Sbjct: 540 RKKF------ISSEGDHITLLNIYRTFKNIGGNKDWCKENFVNSKNMLLVAEVRAQLREI 593
Query: 533 MQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQ 592
K++ + SR D +R+ C+ ++ + + +G Q V
Sbjct: 594 CLKMSMPIMS---------SRGDMESVRR--CMAHSLFMNTAELQTDGTYATTDTHQPVA 642
Query: 593 VHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
+HPSS L + P VVY L+ T++ YMR++C V+ +W+
Sbjct: 643 IHPSSVLFHCK----PACVVYTSLLYTNKCYMRDLCVVDAEWL 681
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 451 bits (1159), Expect = e-125, Method: Compositional matrix adjust.
Identities = 256/639 (40%), Positives = 385/639 (60%), Gaps = 27/639 (4%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
NLPI + +T+ + ++ N V+VV+GETGSGKSTQ+ Q L+ Y + G + +TQPRRVAA
Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAA 154
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
V++A+RVA E G RLGE+VGY+IRF+D TS++T IKYLTDG+LLRE++++P LS Y +I
Sbjct: 155 VNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLI 214
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
LDEAHER+L TD+LLG VK+++ R + L+++I SATL+ E+ S+FF + G+ Y
Sbjct: 215 LDEAHERTLMTDMLLGFVKKIIKKRPA-LRVIIMSATLNAERFSEFFDGAEICYISGRQY 273
Query: 183 PVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSLDE 242
PV+I ++ YL++ L+T +H + P GD+L+F+TGQD+IE L + ++ + L
Sbjct: 274 PVQIHYTYTPEPDYLDACLRTIFQLHTKLPPGDILVFLTGQDEIEALEALIKSYSKQL-P 332
Query: 243 GSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVK 302
+ PL SLP E Q++VF P N R+ ++STNIAETS+T+ G+ YVID G K
Sbjct: 333 SNLPQIQACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAK 392
Query: 303 QRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQ 362
+Q+N G+ SL V IS+ A QR GRAGR G+CYR+Y + D+ T+PEI+
Sbjct: 393 IKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADF-DKLPKETIPEIK 451
Query: 363 RSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRT 422
R L+ +VL LK+ +D V+ F ++DPPS E L AL+ LY I A+D+NG I +G
Sbjct: 452 RIDLSQAVLTLKARGQND--VINFHYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQ 509
Query: 423 MAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPD 482
M+ +PL PSL+R ++ A E CLS+ + V + LS ++ L + EK+ + L
Sbjct: 510 MSLIPLLPSLARAVLAAREHNCLSEVIDVVSCLSTDSMFLFPQ----EKRDEAIEARLKF 565
Query: 483 GSGWGDHIQLLQIYECWDECDYDV--NWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGS 540
GD + L + E +D W N + R + + DIRKQL + K
Sbjct: 566 LHSEGDLLTCLNALRQYLESSHDSRKQWCSQNFINRRALKTILDIRKQL---REHCLKDG 622
Query: 541 LDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNG-YRTLGFKPQLVQVHPSSEL 599
++ ++ + L + GY A ++H +G YRT+ Q + +HPSS L
Sbjct: 623 WELNSS-----PEVNSENLLLSFLSGYITNTA--LLHPDGSYRTI-IGNQTISIHPSSSL 674
Query: 600 KTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPI 638
G ++YHEL+ T++ Y+R V ++ W+ +
Sbjct: 675 F----GKKVEAIMYHELVFTTKSYVRGVSSIRSNWLNAV 709
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 446 bits (1146), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/643 (39%), Positives = 387/643 (60%), Gaps = 35/643 (5%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LPI Q ++ + V+IGETGSGK+TQ+ Q L+ G ++ GII VTQPRRVAA
Sbjct: 73 SLPIFQARGQLLAQLRNLDNAVLIGETGSGKTTQIPQYLYEGGISRQGIIAVTQPRRVAA 132
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+S+A RV+ E LG+ VGY +RF+D TSE T IK+LTDG+LLRE +S+ L YS +I
Sbjct: 133 ISLATRVSDEKRTELGKLVGYTVRFDDVTSEDTRIKFLTDGMLLREAISDSLLRKYSCVI 192
Query: 123 LDEAHERSLNTDILLGLVK----RLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
LDEAHER+++TD+L G+VK R L LK+++ SAT+D + S++F+ P L +
Sbjct: 193 LDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQYFNGAPVLYLE 252
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEG-DVLIFMTGQDDIEKLVSKLEDKI 237
G+ +P+++ ++K+ YL +AL + IH P D+L+F+TGQ++IE + D
Sbjct: 253 GRQHPIQVFYTKQPQNDYLHAALVSVFQIHQEAPSSQDILVFLTGQEEIEAMSKTCRDIA 312
Query: 238 RSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVID 297
+ L +G C ++LPL+ SLP Q+RVF P R+ I+STNIAETS+T+ G+ YV+D
Sbjct: 313 KHLPDG-CPAMLVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVD 371
Query: 298 CGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVT 357
G VK ++YNP SG+ L V ++SK QA QR GRAGR G CYRLY + ++F +T
Sbjct: 372 TGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEF-EKFDKMT 430
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI---DENG 414
VPEIQR +LA +L L ++ + NVL FDF+ PS + ++ A+ QL L+ A+ D+
Sbjct: 431 VPEIQRCNLASVMLQLLAMKVP--NVLTFDFMSKPSPDHIQAAIAQLDLLGALEHKDDQL 488
Query: 415 SITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL--PGRSKSTEKK 472
++T +GR MA PLEP ++ ++ + +F C + LT+ ++LS ++ L P R + +
Sbjct: 489 TLTPMGRKMAAFPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGV 548
Query: 473 RKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQI 532
RK S GDH+ LL IY + + +W K+N + + M V ++R QL I
Sbjct: 549 RKKF------ISSEGDHMTLLNIYRTFKNLGGNKDWCKENFVNSKNMTLVAEVRAQLRDI 602
Query: 533 MQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQ 592
K+ S+ + + SR D +R+ C+ ++ ++ + +G Q V
Sbjct: 603 CLKM---SMPIAS------SRGDVESVRR--CLAHSLFMSTAELQPDGTYATTDTHQPVA 651
Query: 593 VHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
+HPSS L + P VVY EL+ T++ YMR++C ++ QW+
Sbjct: 652 IHPSSVLFHCK----PACVVYTELLYTNKCYMRDLCVIDAQWL 690
>sp|Q9BKQ8|DHX35_CAEEL Probable ATP-dependent RNA helicase DHX35 homolog OS=Caenorhabditis
elegans GN=Y67D2.6 PE=3 SV=1
Length = 732
Score = 427 bits (1098), Expect = e-118, Method: Compositional matrix adjust.
Identities = 242/652 (37%), Positives = 387/652 (59%), Gaps = 51/652 (7%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-IIGVTQPRRVAA 62
LPI + I+ E+ ++++GETG GKSTQ+ Q L G+ G I +TQPRRVA
Sbjct: 77 LPIFKNRGHILYMCERYRTIIIVGETGCGKSTQVPQFLLEAGWAADGRQIVITQPRRVAV 136
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
V++A RVA+E LG +VGY +RF+D + + T +K++TDG+LLREIL++P LS YS+I+
Sbjct: 137 VTLATRVAEEKDCILGHDVGYTVRFDDVSDKDTKVKFMTDGLLLREILADPLLSKYSIIM 196
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN------ 176
+DEAHERS NTDILLGL+++++ +R + L+I+++SATLD E FF T N
Sbjct: 197 IDEAHERSCNTDILLGLLRKIIQIR-NDLRIIVSSATLDAELFKDFFEMNETGNSDKDTA 255
Query: 177 ----VPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSK 232
V G+ +PV + H+K Y +SA+ T I+IH E GD+L+F+TGQD++E + K
Sbjct: 256 GIISVEGRTHPVAVHHTKTSVPDYCQSAVDTVINIHKHENPGDILVFLTGQDEVEDVCEK 315
Query: 233 LEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGV 292
L + +L +C ++P +G+LP Q++ F P R+ +V+TNIAE S+T+ G+
Sbjct: 316 LRELAGNLK--NCDRLWVVPCYGALPAREQMKAFDSTPHGTRKVVVATNIAEASITIPGI 373
Query: 293 VYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDE 352
YVID GYVK R + ++G+ +L V +SK A QR GRAGR RPGKCYRLYP + + +
Sbjct: 374 CYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGRIRPGKCYRLYPESEF-ER 432
Query: 353 FLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDE 412
F + TVPEIQR +A ++L LK+L + NV +F +L PP S ++ + L+ LY + AIDE
Sbjct: 433 FAEGTVPEIQRCQMASTILQLKALGVQ--NVHRFHYLSPPPSWAMINGLELLYALGAIDE 490
Query: 413 NGSITS-IGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSK-ST 469
+TS +G MAE PL P S+ L+++ EFGC ++ +T+ AM+ + + P R +
Sbjct: 491 TSQLTSPLGLQMAEFPLPPMHSKCLLKSAEFGCSTEMVTIVAMMQIQDVFITPYRQRHQA 550
Query: 470 EKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQL 529
+ RK +E GDH+ +L ++ + E W D+ + RG+M ++R QL
Sbjct: 551 DVIRKKFAVE------EGDHMTMLNVFTKFVENGRSKKWCSDHFVNYRGLMRADNVRSQL 604
Query: 530 CQIMQKI------AKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRT 583
+++++ ++G ++ N +R+ L G+ +Q A+ H+ G
Sbjct: 605 VRLLKRFEIEKVSSRGLINCSEN------------IRQCLVTGFFSQAAQ--YHYTGKYM 650
Query: 584 LGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWV 635
+ ++ S + ++ P +V++ E++ S +R+V +E +W+
Sbjct: 651 TVKESFPFNMYKGSSIMFKKD--YPKWVIFTEVMQDS---IRDVTVIEPEWL 697
>sp|P36009|DHR2_YEAST Probable ATP-dependent RNA helicase DHR2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DHR2 PE=1
SV=1
Length = 735
Score = 392 bits (1008), Expect = e-108, Method: Compositional matrix adjust.
Identities = 245/661 (37%), Positives = 378/661 (57%), Gaps = 22/661 (3%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGY--TKSGIIGVTQPRRVA 61
LP+ Q++ I+ +E NPV V+IGETGSGKSTQ+ Q + Y K G I VTQPRRVA
Sbjct: 81 LPVYQHKREIMSYIESNPVTVLIGETGSGKSTQIPQFVLEKLYDTKKHGSIAVTQPRRVA 140
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
A+++A RVAQE G +LGE+VGY++RF++ T+ RT +KYLTDG+LLRE++ N DL YSVI
Sbjct: 141 AINLATRVAQEHGCKLGEQVGYSVRFDNTTTTRTRLKYLTDGMLLRELMMNSDLREYSVI 200
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
++DEAHER++ TD++LG +K L+ L+I++ SATL EK S+FF+N P L V G+
Sbjct: 201 VIDEAHERTVLTDLILGFLKSLIQGPRPDLRIIVMSATLQAEKFSEFFNNAPILFVEGRK 260
Query: 182 YPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL- 240
+ V+ + K +++ ++ I I+ E GD+L F+ GQ++I+K V+ +E + +
Sbjct: 261 FDVKQYYLKAPTDDIVDAVIRCCIQINQGEELGDILCFLPGQEEIDKAVTIMEKIAKYVS 320
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
DE V PL+ +LP Q VF+P R+ + STNIAETS+T+ GV +V+D G
Sbjct: 321 DEAPVPLIVPYPLYAALPAVQQSLVFAPIKGFKRKVVFSTNIAETSVTISGVKFVVDSGL 380
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPE 360
K + + G+ +L V IS+ A QR GRAGR GK +RLY + Y + + PE
Sbjct: 381 RKVKVWRHQLGLATLLTVPISQASAMQRSGRAGRESEGKSFRLYCESDYV-KLPKQSEPE 439
Query: 361 IQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIG 420
I RS + VL LK + D+ L + + + P E++ L++LY + A+D G IT G
Sbjct: 440 IARSDVTSPVLMLKRYGVDDL--LNWTWFENPGKEAIVMGLQELYELGALDTRGKITKRG 497
Query: 421 RTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL-PGRSKSTEKKRKHTPLE 479
+ MA LPL+P LS +L++A+E GCLSQ + + + LS E LL P + E + L
Sbjct: 498 QQMALLPLQPHLSSVLIKASEVGCLSQVIDIVSCLSVENLLLNPSPEERDEVNERRLSL- 556
Query: 480 LPDGSGWGDHIQLLQIYECW--------DECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQ 531
G +GD I L ++++ + D +W K + +RG V +R QL
Sbjct: 557 CNAGKRYGDLIMLKELFDIYFYELGKSQDASSERNDWCKGLCISIRGFKNVIRVRDQLRV 616
Query: 532 IMQKI-AKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQL 590
+++ + S + + E + K+ K G+ A M + YRT+ +
Sbjct: 617 YCKRLFSSISEEDEESKKIGEDGELISKILKCFLTGFIKNTAIGMPDRS-YRTVS-TGEP 674
Query: 591 VQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKKLEKIDINKL 650
+ +HPSS L ++ P ++Y E + T++ Y RNV +E+ W+ ++ + K+
Sbjct: 675 ISIHPSSMLFMNKS--CPG-IMYTEYVFTTKGYARNVSRIELSWLQEVVTNAAAVAKQKV 731
Query: 651 S 651
S
Sbjct: 732 S 732
>sp|Q9HE06|YK99_SCHPO Putative pre-mRNA-splicing factor ATP-dependent RNA helicase
C20H4.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=SPAC20H4.09 PE=3 SV=1
Length = 647
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 235/641 (36%), Positives = 377/641 (58%), Gaps = 35/641 (5%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGY-TKSGIIGVTQPRRVAA 62
LPI +Y ++ VEQN + +V+G TG GK+TQ+ Q L+ G+ +++GIIG TQPRR+ A
Sbjct: 25 LPITKYRNQLLYAVEQNQITIVLGHTGCGKTTQIPQFLYEAGWASQNGIIGCTQPRRLVA 84
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
SV+ RV+ EL G GY+I+F+ SE+T IKY+TDG+LL EI +P L YS++I
Sbjct: 85 KSVSERVSLELNSPPGSLCGYSIQFDHNVSEKTKIKYMTDGILLNEIFFDPLLERYSIVI 144
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSN--CPTLNVPGK 180
LDE HER+L+TD+LLG++KR++ R + +++++SA++D K+S+FF T+++ GK
Sbjct: 145 LDEVHERTLSTDLLLGVLKRILEKR-NDFRLVLSSASVDANKLSQFFGQDKVCTMSIEGK 203
Query: 181 LYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRSL 240
L+PVE L ++ +Y++SA++T I+I+ P GD+L+F++G+ +IE + K+ED +
Sbjct: 204 LFPVETLFLQKPTENYVDSAIETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHA 263
Query: 241 DEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGY 300
E C V LPLH L + Q+RVF+ + R+ I STNIAETS+T+DG+VYV+D G+
Sbjct: 264 SE-DCQTLVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGF 322
Query: 301 VKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY---HDEFLDVT 357
KQR YNP + L V ISK A QR GRAGRT GK +RLY Y +EF
Sbjct: 323 NKQRIYNPYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEF---- 378
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSIT 417
+I ++ VL+LK L L N+L+F F P + L AL+ LYL+ +DE+G++T
Sbjct: 379 EADILNCDMSPLVLFLKGLGLK--NILQFPFFVRPPTVHLMAALEDLYLLGVLDESGNLT 436
Query: 418 S-IGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSA-ETTLLPGRSKSTEKKRKH 475
+G ++ L+ ++S+ L+ +N+FGC + L++A++L+A E P S + H
Sbjct: 437 DPLGIQISNSFLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKNDAFVAH 496
Query: 476 TPLELPDGSGWGDHIQLLQIYECWDECDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQK 535
+ + GD I L ++E + D+ W + N L + + DIR L + + K
Sbjct: 497 SSF----FANEGDIITALNVFESFVGNKKDLQWCRKNYLNYQTLRQALDIRTHLVRFLNK 552
Query: 536 IAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFKPQLVQVHP 595
+ + + D K+ K L G+ +A + + Y+T+G K V +
Sbjct: 553 FSIPTAQ-------RLPSSDCSKILKCLLDGFVRNVA-HLQNDGSYKTIGGKQ--VWLDS 602
Query: 596 SSELKTDEEGLLPNYVVYHELIAT-SRPYMRNVCAVEMQWV 635
SS L E P +++Y + + ++ +++N+ +E W+
Sbjct: 603 SSVL---HEKKTP-WIMYSSAVESETQIFVKNISKIESFWL 639
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 381 bits (979), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/451 (44%), Positives = 291/451 (64%), Gaps = 21/451 (4%)
Query: 97 IKYLTDGVLLREILSNPDLSPYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILIT 156
IKY+TDG+LLRE +++P L Y VI+LDEAHER++ TDIL+GL+K + R S LK+++
Sbjct: 1 IKYMTDGMLLREGMTDPLLERYGVILLDEAHERTVATDILMGLLKEVEKQR-SDLKLVVM 59
Query: 157 SATLDGEKVSKFFSNCPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHV-REPEGD 215
SATLD K +F N P + VPG+ +PVEI ++ E YLE+A++T + IH+ E EGD
Sbjct: 60 SATLDAGKFQHYFDNAPLMTVPGRTHPVEIFYTPEPERDYLEAAIRTVVQIHMCEEVEGD 119
Query: 216 VLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPN--- 272
VL+F+TGQ++IE+ +++ ++ +L D +PL+ +LPP MQ R+F PPN
Sbjct: 120 VLLFLTGQEEIEEACKRIKREVDNLGP-EVGDLKTIPLYSTLPPAMQQRIFEHAPPNKAN 178
Query: 273 ---CRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRV 329
R+ +VSTNIAETSLT+DGVV+VID G+ KQ+ YNP + SL V ISK A QRV
Sbjct: 179 GAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRV 238
Query: 330 GRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFL 389
GRAGRTRPGKC+RLY Y E D T PEI RS+L VL LK L + D+ + FDF+
Sbjct: 239 GRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKKLGIDDL--VHFDFM 296
Query: 390 DPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQAL 449
DPP+ E+L AL+ L + A+D++G +T +G MAE PL+P L++M++ + ++ C ++ L
Sbjct: 297 DPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIASTDYSCSNEIL 356
Query: 450 TVAAMLSAETTLL-PGRSK--STEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDV 506
+V AMLS L P +K + E K + ++ GDH+ LL +Y + + + D
Sbjct: 357 SVTAMLSVPQCFLRPNEAKKLADEAKMRFAHID-------GDHLTLLNVYHAFKQNNEDP 409
Query: 507 NWVKDNGLQVRGMMFVKDIRKQLCQIMQKIA 537
W DN +Q R + +R+QL +IM + A
Sbjct: 410 QWCYDNFIQYRSLKSADSVRQQLARIMDRFA 440
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECM16 PE=1
SV=1
Length = 1267
Score = 347 bits (891), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 210/551 (38%), Positives = 295/551 (53%), Gaps = 104/551 (18%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKS------GIIGVTQP 57
LP+ E I+E + N VV++ GETGSGK+TQ+ Q L+ G+ G++G+TQP
Sbjct: 391 LPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQP 450
Query: 58 RRVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSP 117
RRVAAVS+A RVA ELG G +VGY IRF+ E T +K++TDGVLLRE++ + L+
Sbjct: 451 RRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTK 509
Query: 118 YSVIILDEAHERSLNTDILLGLVKRLVNLRAS----------KLKILITSATLDGEKVSK 167
YS II+DEAHER++NTDIL+G++ R V LRA KLK++I SATL +VS
Sbjct: 510 YSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATL---RVSD 566
Query: 168 FFSN-------CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFM 220
F N P L V + +PV I ++ +Y + A + IH + P G +L+F+
Sbjct: 567 FSENKTLFPIAPPVLQVDARQFPVSIHFNRRTAFNYTDEAFRKTCKIHQKLPPGAILVFL 626
Query: 221 TGQD-----------------------DIEKLVSKL----------------------ED 235
TGQ D+E VSK+ +D
Sbjct: 627 TGQQEITHMVKRLRKEFPFKKNSKYNKDLETPVSKMGINSKTTDLEAEDIDFSVQVIDQD 686
Query: 236 KIRSL-----DEGSCMDAV-------------------------ILPLHGSLPPEMQVRV 265
K +S DEG+ + +LPL+ LP + Q+RV
Sbjct: 687 KFKSAIRYEEDEGNSGNGEDEEDEEEEGFEEVLTEGQTANDPLYVLPLYSLLPTKEQMRV 746
Query: 266 FSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQA 325
F PP R IV+TN+AETSLT+ GV YV+D G K+R+YN S+G+ S +V +SK A
Sbjct: 747 FQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASA 806
Query: 326 NQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLK 385
NQR GRAGRT PG CYRLY S V+ +F + PEI R + VL +KS+ + N++
Sbjct: 807 NQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVESIVLQMKSMAIH--NIIN 864
Query: 386 FDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCL 445
F F PP +L A++ L + A+D IT G+ M+ PL P S+ML+ ++E CL
Sbjct: 865 FPFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPLSPRFSKMLLVSDEKACL 924
Query: 446 SQALTVAAMLS 456
+ + + LS
Sbjct: 925 PYIVAIVSALS 935
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 339 bits (870), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 212/583 (36%), Positives = 327/583 (56%), Gaps = 42/583 (7%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVA 61
A LPI QY I++T++++ VVVV G+TG GKSTQ+ Q L G++ + TQPRR+A
Sbjct: 160 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 216
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+S+A+RV E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 217 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVL 276
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FSN P + VPG+L
Sbjct: 277 IVDEVHERHLHNDFLLGVLQRLLPTRPD-LKVILMSATINISLFSSYFSNAPVVQVPGRL 335
Query: 182 YPVEILHSKER--PTSYLESALKT--------AIDIHVREPE--GDVLIFMTGQDDIEKL 229
+P+ +++ + PT+ L +ID H PE GD+L+F++G +I +
Sbjct: 336 FPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESID-HKYPPEERGDLLVFLSGMAEISAV 394
Query: 230 VSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
+ + V+LPLH +L Q +VF PP R+ I+STNIAETS+T+
Sbjct: 395 LEAAQTYA-----SHTQRWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTI 449
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG C+RLY + Y
Sbjct: 450 DGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLYAESDY 509
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLID- 408
D F VPEI+R +L VL +KS+ + D F F++PP SLE A+ LYL D
Sbjct: 510 -DAFAPYPVPEIRRVALDSLVLQMKSMSVGDPRT--FPFIEPPPPASLETAI--LYLRDQ 564
Query: 409 -AIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSK 467
A+D + ++T IG +A+LP++ + +ML+ + F + LT+AA LS ++
Sbjct: 565 GALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQS 624
Query: 468 STEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVN-----WVKDNGLQVRGMMFV 522
S E PLE S GD L ++ W + + + W + G++ + +
Sbjct: 625 SPECAAARRPLE----SDQGDPFTLFNVFNAWVQVKSERSRNSRKWCRRRGIEEHRLYEM 680
Query: 523 KDIRKQLCQIMQK--IAKGSLDVRANHIWKESRQDYRKLRKAL 563
++R+Q ++++ + G+ + + SR R+ R+AL
Sbjct: 681 ANLRRQFKELLEDHGLLAGAQAAQVGDSY--SRLQQRRERRAL 721
>sp|P45018|HRPA_HAEIN ATP-dependent RNA helicase HrpA homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=hrpA PE=3
SV=2
Length = 1304
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 228/663 (34%), Positives = 354/663 (53%), Gaps = 58/663 (8%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
+LP+ Q + I + + ++ V+VV GETGSGK+TQL ++ G+ G+IG TQPRR+AA
Sbjct: 82 SLPVSQRKVEIQKLISEHQVIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAA 141
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
SVA R+A+EL LG VGY +RF D+ S+ T IK +TDG+LL EI ++ L+ YS +I
Sbjct: 142 RSVAARIAEELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCLI 201
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D +LG +K+L+ R LK++ITSAT+D E+ SK F+N P + V G+ Y
Sbjct: 202 IDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNNAPIIEVSGRTY 261
Query: 183 PVEILHS---KERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
PVE+ + +E L+ L A+D E GD+LIFM G+ +I D +
Sbjct: 262 PVEVRYRPVVEEDDQDQLQGIL-NAVDELQAEGRGDILIFMNGEREIR-------DTAEA 313
Query: 240 LDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
L + + ILPL L + Q ++F P N R +++TN+AETSLTV + YVID G
Sbjct: 314 LQKQNLKHTEILPLFARLSAQEQNKIFHPSGLN--RIVLATNVAETSLTVPSIKYVIDPG 371
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHD--EFLDVT 357
+ +Y+ + + L + IS+ ANQR GR GR G C RLY ++ EF D
Sbjct: 372 TARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSEEDFNSRPEFTD-- 429
Query: 358 VPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAID------ 411
PEI R++LA +L + +L L DI F F+D P ++D +K L + A +
Sbjct: 430 -PEILRTNLASVILQMTALGLDDIEA--FPFVDAPDERHIQDGVKLLEELGAFETVQTKS 486
Query: 412 -ENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTE 470
E +T +GR +A+LP++P L++M++ A FGC+ + + + + LS + + K
Sbjct: 487 GEKRLLTRVGRQLAQLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQA 546
Query: 471 KKRKHTPLELPDGSGWGDHIQLLQIYECWDE-------CDYDVNWVKD--NGLQVRGMMF 521
KH D + L ++ E + KD N L++R
Sbjct: 547 SDEKHRRF----ADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREW-- 600
Query: 522 VKDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGY 581
+DI QI + + SL + + + +Y+++ AL G + + + Y
Sbjct: 601 -QDI---YHQIRLTVREMSLPINS------EKAEYQQIHTALLSGLLSHIGLKEAEKQQY 650
Query: 582 RTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPILKK 641
LG + + P+S L + P +V+ EL+ TS+ + R V +E +W+ P+ +
Sbjct: 651 --LGARNAHFAIFPNSVLFKKQ----PKWVMAAELVETSKLWGRMVAEIEPEWIEPLAEH 704
Query: 642 LEK 644
L K
Sbjct: 705 LIK 707
>sp|Q9HDY4|YK16_SCHPO Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAPB1A10.06c PE=3
SV=1
Length = 1183
Score = 338 bits (867), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 234/708 (33%), Positives = 352/708 (49%), Gaps = 106/708 (14%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYT-----KSGIIGVTQPR 58
LPI+ E+ I+E + N VV++ G TGSGK+TQL Q L G++ G+I +TQPR
Sbjct: 398 LPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPR 457
Query: 59 RVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
RVAAVS+A+RV++EL +V Y IRF+ + T IK++TDG+LLRE+ S+ L+ Y
Sbjct: 458 RVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAY 516
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLR---------ASKLKILITSATLDGEKVSKFF 169
S +I+DEAHERS+NTDILLGL+ R+V LR LK++I SATL +V+ F
Sbjct: 517 SAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATL---RVTDFS 573
Query: 170 SN-------CPTLNVPGKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTG 222
N P + + + YPV I ++ YL+ A IH R P G +L+F+TG
Sbjct: 574 ENKLLFSVPPPIIKIDARQYPVSIHFNRTTKPDYLQDAFDKVCLIHKRLPAGSILVFLTG 633
Query: 223 QDDIEKLVSKLEDK-IRSL------------------------DEGSCMDAV-------- 249
Q ++E+L L + +RS E +D V
Sbjct: 634 QQEVEQLCQMLRKRFVRSFRPLKSRARIVVSRKTMSVENEDLQSETEDIDQVPTSSSSSV 693
Query: 250 ----------ILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDCG 299
+LPL+ L E Q++VF P R IV+TN+AETS+T+ + YV+DCG
Sbjct: 694 TYDDESEPMYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCG 753
Query: 300 YVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFLDVTVP 359
K+R YN + + +V ISK A+QR GRAGRT PG CYRLY S V+ F ++P
Sbjct: 754 KAKERVYNEKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLP 813
Query: 360 EIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSI 419
EI R+ + VL +K++++ N+ F F P LE +LK L + AID G +T +
Sbjct: 814 EILRTPVESIVLQMKNMNID--NIANFPFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKL 871
Query: 420 GRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRS---KSTEKKRKHT 476
G M+ PL P S+ML+ + GCL + + + LS + +S + +K +
Sbjct: 872 GEQMSLFPLSPRFSKMLIIGQQHGCLPYVIALVSALSINQLFVSKQSLLYDAHDKNSRSE 931
Query: 477 PLELPDGS-------------GWGDHIQLLQIYE--------CWDECDYDV-----NWVK 510
+L D G+ + I Q + C YD + K
Sbjct: 932 ETDLIDDDEIKQKEEYKNRMRGYFNAISRFQAIDPDAPALSLLSAVCAYDYASDKRKFCK 991
Query: 511 DNGLQVRGMMFVKDIRKQLCQIMQK-IAKGSLDVRANHIWKESRQDYRKLRKALCVGYAN 569
+N L+ + + V ++RKQ+ ++++ + + + + + + LR+ + Y +
Sbjct: 992 ENYLREKALEEVTNLRKQIIGLLKRYMVRVEKEFFKLQLKPPTSVQIKALRQFIASAYID 1051
Query: 570 QLAERMIHHNGYRTL-GFKPQLVQVHPSSELKTDEEGLLPNYVVYHEL 616
Q+A GY TL ++VQ P D E YVVY L
Sbjct: 1052 QVALYDKEKRGYVTLFPSGSEVVQFVPDRTYNIDSE-----YVVYLSL 1094
>sp|P43329|HRPA_ECOLI ATP-dependent RNA helicase HrpA OS=Escherichia coli (strain K12)
GN=hrpA PE=3 SV=3
Length = 1300
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 237/665 (35%), Positives = 361/665 (54%), Gaps = 62/665 (9%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAA 62
NLP+ Q ++ I+E + + VV+V GETGSGK+TQL +I G G+IG TQPRR+AA
Sbjct: 76 NLPVSQKKQDILEAIRDHQVVIVAGETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAA 135
Query: 63 VSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
+VA R+A+EL G +GY +RF D S+ T++K +TDG+LL EI + L Y II
Sbjct: 136 RTVANRIAEELKTEPGGCIGYKVRFSDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTII 195
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLN D LLG +K L+ R LKI+ITSAT+D E+ S+ F+N P + V G+ Y
Sbjct: 196 IDEAHERSLNIDFLLGYLKELLPRRPD-LKIIITSATIDPERFSRHFNNAPIIEVSGRTY 254
Query: 183 PVEILH------SKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDK 236
PVE+ + + + L+ A+ A+D +E GD+LIFM+G+ +I D
Sbjct: 255 PVEVRYRPIVEEADDTERDQLQ-AIFDAVDELSQESHGDILIFMSGEREIR-------DT 306
Query: 237 IRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVVYVI 296
+L++ + ILPL+ L Q RVF + RR +++TN+AETSLTV G+ YVI
Sbjct: 307 ADALNKLNLRHTEILPLYARLSNSEQNRVFQSH--SGRRIVLATNVAETSLTVPGIKYVI 364
Query: 297 DCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEFL-- 354
D G + +Y+ + + L + IS+ ANQR GR GR G C RLY D+FL
Sbjct: 365 DPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGICIRLYSE----DDFLSR 420
Query: 355 -DVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI--D 411
+ T PEI R++LA +L + +L L DI F F++ P +++D ++ L + AI D
Sbjct: 421 PEFTDPEILRTNLASVILQMTALGLGDIAA--FPFVEAPDKRNIQDGVRLLEELGAITTD 478
Query: 412 ENGS---ITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTL---LPGR 465
E S +T +GR +++LP++P L+RM++EA + GC+ +A+ + + LS + + +
Sbjct: 479 EQASAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQ 538
Query: 466 SKSTEKKRKHTPLE---LPDGSGW---GDHIQLLQIYECWDECDYDVNWVKDNGLQVRGM 519
S EK R+ E L + W G+ + L C D N L+VR
Sbjct: 539 QASDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNAFRRLCRTDYL----NYLRVREW 594
Query: 520 MFVKDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHN 579
+DI QL Q++++ L + N +YR++ AL G + + +
Sbjct: 595 ---QDIYTQLRQVVKE-----LGIPVN----SEPAEYREIHIALLTGLLSHIGMKDADKQ 642
Query: 580 GYRTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPIL 639
Y G + + P S L P +V+ EL+ TSR + R ++ +WV P+
Sbjct: 643 EY--TGARNARFSIFPGSGLFKKP----PKWVMVAELVETSRLWGRIAARIDPEWVEPVA 696
Query: 640 KKLEK 644
+ L K
Sbjct: 697 QHLIK 701
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 328 bits (840), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 204/581 (35%), Positives = 323/581 (55%), Gaps = 38/581 (6%)
Query: 2 ANLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVA 61
A LPI QY I++T++++ VVVV G+TG GKSTQ+ Q L G++ + TQPRR+A
Sbjct: 162 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIA 218
Query: 62 AVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVI 121
+S+A+RV E + G +VGY IRFE S T I +LT G+LLR+I P L Y V+
Sbjct: 219 CISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVL 278
Query: 122 ILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKL 181
I+DE HER L+ D LLG+++RL+ R LK+++ SAT++ S +FS+ P + VPG+L
Sbjct: 279 IVDEVHERHLHNDFLLGVLQRLLPQRPD-LKVILMSATINISLFSSYFSHAPVVQVPGRL 337
Query: 182 YPVEILHSKER------------PTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKL 229
+P+ +++ + P +L L+ + + E GD+L+F++G +I +
Sbjct: 338 FPITVVYQPQEADQTASKSEKLDPRPFLR-VLEAIDNKYPPEERGDLLVFLSGMAEITTV 396
Query: 230 VSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTV 289
+ + SL + V+LPLH +L Q +VF P R+ I+STNIAETS+T+
Sbjct: 397 LDAAQ-AYASLTQ----RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTI 451
Query: 290 DGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVY 349
DG+ +V+D G VK+ Y+P + + L IS+ A QR GRAGRT PG CYRLY + Y
Sbjct: 452 DGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDY 511
Query: 350 HDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA 409
D F VPEI+R +L VL +KS+ + D F F++PP S+E A+ L A
Sbjct: 512 -DAFAPYPVPEIRRVALDALVLQMKSMSVGDPRT--FPFIEPPPPASVETAILYLQEQGA 568
Query: 410 IDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKST 469
+D + ++T IG +A+LP++ + +ML+ + F LT+AA LS ++ +
Sbjct: 569 LDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNL 628
Query: 470 EKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVN-----WVKDNGLQVRGMMFVKD 524
+ PLE S GD L ++ W + + + W + G++ + + +
Sbjct: 629 DCATARRPLE----SDQGDPFTLFNVFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMAN 684
Query: 525 IRKQLCQIMQK--IAKGSLDVRANHIWKESRQDYRKLRKAL 563
+R+Q ++++ + G+ V + SR R+ R+AL
Sbjct: 685 LRRQFKELLEDHGLLSGAQVVAPGDSY--SRLQQRRERRAL 723
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 312 bits (799), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 222/649 (34%), Positives = 346/649 (53%), Gaps = 41/649 (6%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSGIIGVTQPRRVAAV 63
LPI Y I++ + ++V+IGETGSGKSTQL Q L G S I TQPR++AA+
Sbjct: 303 LPIYAYRRQILKKIHCEQIMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAAM 362
Query: 64 SVARRVAQEL-GVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYSVII 122
++ RV +E G V F + + Y+TD LL+ + + LS S +I
Sbjct: 363 TLTDRVREESSGCYEENTVSCTPTFSSTEEISSKVVYMTDNCLLQHYMKDRSLSGISCVI 422
Query: 123 LDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPGKLY 182
+DEAHERSLNTD+LL L+++L++ R L+++I SAT D ++S++ +C L+V G+ +
Sbjct: 423 IDEAHERSLNTDLLLALLRKLLSRRID-LRLVIMSATADANQLSQYLFDCGILHVNGRNF 481
Query: 183 PVEILHSKE---------RPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKL 233
PVEI++S R SY +K A++IH E EG +L F+T Q ++E +
Sbjct: 482 PVEIVYSPSGTEENSVVGRIASYAGDVVKMAVEIHKTEKEGTILAFLTSQAEVEWACERF 541
Query: 234 EDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCRRFIVSTNIAETSLTVDGVV 293
A+ LPLHG L E Q VF P R+ I +TNIAETSLT+ GV
Sbjct: 542 VAP----------SAIALPLHGKLSFEEQFMVFQNYPGR-RKVIFATNIAETSLTIPGVK 590
Query: 294 YVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYHDEF 353
YVID G VK+ +Y P +GM L V Q+S+ A QR GRAGRT PG+CYRLY T +
Sbjct: 591 YVIDSGMVKESKYEPRTGMSILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSKTDFDSMN 650
Query: 354 LDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDA-IDE 412
L+ PEI+R L ++L + +L + N+ F+F+D P E++ A++ L + A +++
Sbjct: 651 LNQE-PEIRRVHLGVALLRMLALGID--NIAAFEFVDAPVPEAIAMAIQNLVQLGAVVEK 707
Query: 413 NG--SITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLLPGRSKSTE 470
NG +T G + +L LEP L ++++ + + +AA+++ +++ R + +
Sbjct: 708 NGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIF-CRVGNFD 766
Query: 471 KKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDV--NWVKDNGLQVRGMMFVKDIRKQ 528
K K L++ + GD LL +Y+ W D W +N L + M +D K+
Sbjct: 767 DKMKADRLKVQFCNDNGDLFTLLSVYKEWASLPRDRRNKWCWENSLNAKSMRRCEDTVKE 826
Query: 529 LCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHNGYRTLGFK- 587
L +++ L + + W + + K K L + LAE + + GY LG++
Sbjct: 827 LEICIER----ELTLVSPSYWVWNPNEGTKHDKYLKMVILASLAENVAMYTGYDQLGYEV 882
Query: 588 ---PQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQ 633
Q VQ+HPS L G P++VV+ EL++ Y+ V A + +
Sbjct: 883 ALTSQQVQLHPSCSLLA--FGQKPSWVVFGELLSIVDQYLVCVTAFDFE 929
>sp|Q8BZS9|DHX32_MOUSE Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Mus musculus GN=Dhx32 PE=2 SV=2
Length = 744
Score = 278 bits (711), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 205/662 (30%), Positives = 349/662 (52%), Gaps = 51/662 (7%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHG----YTKSGIIGVTQPRR 59
LPI + + + +E++ QN VVVV G++ GKS+Q+ Q + Y G+I TQ +
Sbjct: 62 LPIWKEKYSFMESLLQNQVVVVSGDSKCGKSSQVPQWCAEYCLSIHYQHGGVI-CTQAHK 120
Query: 60 VAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPYS 119
AV +A RVA E+ V +G EVGY I FE+ + T+++Y TD +L RE++SNP L Y
Sbjct: 121 QTAVQLALRVADEMDVNIGHEVGYVIPFENCCTTETILRYCTDDMLQREMMSNPFLGSYG 180
Query: 120 VIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVPG 179
VIILD+ HERSL TD+LLGL+K ++ R +LK+++ + L K+S ++ + P + V
Sbjct: 181 VIILDDVHERSLATDVLLGLLKDVLLARP-ELKLIVNCSPLLTSKLSSYYGDVPVIEVRN 239
Query: 180 KLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIRS 239
K +PVE+++ ES ++ +IH +GDV++F+ + DIEK + + +
Sbjct: 240 K-HPVEVVYLSGAQKDSFESVIRLIFEIHRSGEKGDVVVFLACEQDIEKTYELVCQEGSN 298
Query: 240 L--DEGSCMDAVILPLHGSLPPEMQVRVFSP---PPPNC----RRFIVSTNIAETSLTVD 290
L D G D V++PL+ P+ + +F P C RR +++T+ E+ +
Sbjct: 299 LNPDVG---DLVVIPLY----PKEKCSLFRPVDETEKRCQVYQRRVVLTTSCGESLIWSH 351
Query: 291 GVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPSTVYH 350
V +VID G +++ YNP SL + IS+ QA R G + GK + LY
Sbjct: 352 TVKFVIDVGLERRQVYNPRIRANSLVLQPISQSQAEIRKQLLGSSPSGKLFCLYTEEFAS 411
Query: 351 DEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYLIDAI 410
+ + E+Q ++L VL++K +D++ + + DF++ P+ ESL AL+ L + A+
Sbjct: 412 KDMRPLKPAEMQEANLTSMVLFMKRVDIAGLG--RCDFMNRPAPESLMQALEDLDYLAAL 469
Query: 411 DENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTLL--PGRSKS 468
D +G+++ G M+E PL+P LS+ ++ + EF C+ + LT+AAM++A + L P ++
Sbjct: 470 DNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEMLTIAAMVTAPSCFLHVPHGAEE 529
Query: 469 TEKKRKHTPLELPDGSGWGDHIQLLQIYECWDECDYDVN---------WVKDNGLQVRGM 519
T L P+ GDH L+ +Y + D +N W D L +
Sbjct: 530 AAVTCWKTFLH-PE----GDHFTLINVYNAYQ--DTVLNSANEHCVEMWCHDCFLSCSAL 582
Query: 520 MFVKDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIHHN 579
IR +L +I+++I + S+++ ++KAL GY Q+A +
Sbjct: 583 RMADVIRAELLEIIKRIELPYAEPAFG-----SKENGLNIKKALLSGYFMQIARDVDGSG 637
Query: 580 GYRTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMRNVCAVEMQWVMPIL 639
Y L K Q+ Q+HP S ++ +P +V++H+ + Y+R AV + M ++
Sbjct: 638 NYLMLTHK-QVAQLHPLSSYSITKK--MPEWVLFHQFSISENNYIRVASAVSPELFMQLV 694
Query: 640 KK 641
+
Sbjct: 695 PQ 696
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 276 bits (705), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 206/695 (29%), Positives = 337/695 (48%), Gaps = 92/695 (13%)
Query: 4 LPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHGYTKSG-----IIGVTQPR 58
LP + I++ ++ + VVV+ GETGSGKSTQ+ Q + H Y SG + TQPR
Sbjct: 577 LPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDH-YLSSGEKDLQTVVCTQPR 635
Query: 59 RVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNP--DLS 116
R++A+S+A RVA E +G+EVGY++ E S+ TL+++ T G+LLR I + LS
Sbjct: 636 RISAISLAERVAFERDTTVGKEVGYSVHGEKSISKETLLEFCTTGLLLRRIQQHGLGFLS 695
Query: 117 PYSVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLN 176
S +++DE HERS+ DILL L+K LV R LK+++ SAT++ + +F N L+
Sbjct: 696 TLSCVVVDEVHERSIENDILLTLLK-LVISRIPNLKVILMSATVNSDTFKYYFGNAGHLH 754
Query: 177 VPGKLYPVEILH---------------------SKERPTSY-LESALKTAIDIHVREPEG 214
+ G+ +P++ + KE Y L S L ++ID + G
Sbjct: 755 IHGRTFPIKDYYIEDFAPKLNEDDDEEDVPRRKKKEYEIDYHLISRLVSSIDAELGSSSG 814
Query: 215 DVLIFMTGQDDIEKLVSKLEDKIRSLDEGSCMDAVILPLHGSLPPEMQVRVFSPPPPNCR 274
+L+F+ G +I + + +++ K +GS + +LPLH SL Q R F R
Sbjct: 815 SILVFLPGVSNIARCIREIKSK-----DGSKFE--VLPLHASLNTSEQRRCFKTYTK--R 865
Query: 275 RFIVSTNIAETSLTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGR 334
+ I +TNIAETS+T+D VV VID G VKQ Y+ + + S+ QR GRAGR
Sbjct: 866 KIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGR 925
Query: 335 TRPGKCYRLYPSTVYHDEFLDVTVPEIQRSSLAGSVLYL-----------KSLDLSDINV 383
+ G CY+LY L T PE+ R++L+ L + S++ I
Sbjct: 926 VKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKK 985
Query: 384 LKFDFLDPPSSESLEDALKQLYLIDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFG 443
+DPP+ +++ ALK+L + A+ + +T +G + LP++ L ++L+ + FG
Sbjct: 986 FMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFG 1045
Query: 444 CLSQALTVAAMLSAETTLLPGRSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDE-- 501
L ALT+ A+LS ++ L G ++ E + K + GWGD + ++Y W E
Sbjct: 1046 YLEPALTITAILSTKSPFL-GDDEAREIRSKQS-------QGWGDVLADARVYHNWLEIL 1097
Query: 502 ----CDYDVNWVKDNGLQVRGMMFVKDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYR 557
V W ++ L + ++ R +L + Q + + + N W S ++
Sbjct: 1098 ETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAAQLLELTTKKLTGNFDWY-STENLT 1156
Query: 558 KLRKAL----------CV----GYANQLAERMIHHNGYRTLGFKPQLVQ---VHPSSELK 600
L + CV + + + R F Q Q +HPSS +
Sbjct: 1157 VLSTLIAAALSPNVVKCVYPDKKFVASFSGSLEMEQEARLTKFYDQNNQRLFIHPSSTMF 1216
Query: 601 TDEEGLLPN-----YVVYHELIATSRPYMRNVCAV 630
+ PN +V Y + + T++P++RN +
Sbjct: 1217 VNS----PNASRCTFVAYEQKVETTKPFLRNCTPI 1247
>sp|Q7L7V1|DHX32_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
OS=Homo sapiens GN=DHX32 PE=1 SV=1
Length = 743
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 198/648 (30%), Positives = 342/648 (52%), Gaps = 54/648 (8%)
Query: 3 NLPILQYEETIVETVEQNPVVVVIGETGSGKSTQLSQILHRHG----YTKSGIIGVTQPR 58
+LPI + + + +E + QN +V+V G+ GKS Q+ Q + Y G+I TQ
Sbjct: 61 DLPIWKEKYSFMENLLQNQIVIVSGDAKCGKSAQVPQWCAEYCLSIHYQHGGVI-CTQVH 119
Query: 59 RVAAVSVARRVAQELGVRLGEEVGYAIRFEDRTSERTLIKYLTDGVLLREILSNPDLSPY 118
+ V +A RVA E+ V +G EVGY I FE+ + T+++Y TD +L RE++SNP L Y
Sbjct: 120 KQTVVQLALRVADEMDVNIGHEVGYVIPFENCCTNETILRYCTDDMLQREMMSNPFLGSY 179
Query: 119 SVIILDEAHERSLNTDILLGLVKRLVNLRASKLKILITSATLDGEKVSKFFSNCPTLNVP 178
VIILD+ HERS+ TD+LLGL+K ++ R +LK++I S+ K++ ++ N P + V
Sbjct: 180 GVIILDDIHERSIATDVLLGLLKDVLLARP-ELKLIINSSPHLISKLNSYYGNVPVIEVK 238
Query: 179 GKLYPVEILHSKERPTSYLESALKTAIDIHVREPEGDVLIFMTGQDDIEKLVSKLEDKIR 238
K +PVE+++ E ES L+ +IH +GD+++F+ + DIEK+
Sbjct: 239 NK-HPVEVVYLSEAQKDSFESILRLIFEIHHSGEKGDIVVFLACEQDIEKVC-------E 290
Query: 239 SLDEGSCMDA-----VILPLHGSLPPEMQVRVFSP---PPPNC----RRFIVSTNIAETS 286
++ +GS ++ V++PL+ P+ + +F P C RR +++T+ E
Sbjct: 291 TVYQGSNLNPDLGELVVVPLY----PKEKCSLFKPLDETEKRCQVYQRRVVLTTSSGEFL 346
Query: 287 LTVDGVVYVIDCGYVKQRQYNPSSGMYSLDVVQISKVQANQRVGRAGRTRPGKCYRLYPS 346
+ + V +VID G +++ YNP SL + IS+ QA R G + GK + LY
Sbjct: 347 IWSNSVRFVIDVGVERRKVYNPRIRANSLVMQPISQSQAEIRKQILGSSSSGKFFCLYTE 406
Query: 347 TVYHDEFLDVTVPEIQRSSLAGSVLYLKSLDLSDINVLKFDFLDPPSSESLEDALKQLYL 406
+ + E+Q ++L VL++K +D++ + DF++ P+ ESL AL+ L
Sbjct: 407 EFASKDMTPLKPAEMQEANLTSMVLFMKRIDIAGLG--HCDFMNRPAPESLMQALEDLDY 464
Query: 407 IDAIDENGSITSIGRTMAELPLEPSLSRMLMEANEFGCLSQALTVAAMLSAETTL--LPG 464
+ A+D +G+++ G M+E PL+P LS+ ++ + EF C+ + LT+AAM++A +P
Sbjct: 465 LAALDNDGNLSEFGIIMSEFPLDPQLSKSILASCEFDCVDEVLTIAAMVTAPNCFSHVPH 524
Query: 465 RSKSTEKKRKHTPLELPDGSGWGDHIQLLQIYECWDEC------DYDV-NWVKDNGLQVR 517
++ T L P+ GDH L+ IY+ + + +Y V W +D L
Sbjct: 525 GAEEAALTCWKTFLH-PE----GDHFTLISIYKAYQDTTLNSSSEYCVEKWCRDYFLNCS 579
Query: 518 GMMFVKDIRKQLCQIMQKIAKGSLDVRANHIWKESRQDYRKLRKALCVGYANQLAERMIH 577
+ IR +L +I+++I + S+++ ++KAL GY Q+A +
Sbjct: 580 ALRMADVIRAELLEIIKRIELPYAEPAFG-----SKENTLNIKKALLSGYFMQIARDVDG 634
Query: 578 HNGYRTLGFKPQLVQVHPSSELKTDEEGLLPNYVVYHELIATSRPYMR 625
Y L K Q+ Q+HP S ++ +P +V++H+ + Y+R
Sbjct: 635 SGNYLMLTHK-QVAQLHPLSGYSITKK--MPEWVLFHKFSISENNYIR 679
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 256,355,455
Number of Sequences: 539616
Number of extensions: 10773769
Number of successful extensions: 42918
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 160
Number of HSP's that attempted gapping in prelim test: 41934
Number of HSP's gapped (non-prelim): 426
length of query: 704
length of database: 191,569,459
effective HSP length: 125
effective length of query: 579
effective length of database: 124,117,459
effective search space: 71864008761
effective search space used: 71864008761
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)