Your job contains 1 sequence.
>005296
MITFMDSKEKLKEVEKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSC
RRIPPYILCRVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA
SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRG
TPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGPEVTSGWNGN
CVTPYGGFSAFLREDDNKLMRNGIGNVNGPSSNNGNNLMAKGKVRPESVIEAATLAANRQ
PFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQV
SDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPPRKKSRLPQ
PPDFPLDGQLPMPSFSGSLLGPNSPFGCLPDNTPAGMQGARHAHYGLSLSDLHLNKLQSG
LSPAGFPPFDRAAKPTRASNSPILQKPSMSENISCLLTMSHSTQPSKKADDLKTPQLVLF
GKPILTEQQMSHSCSGDTVSPVRTGNSSSEGNLDKLTNFSDGSGSALQQQGLPDRSFCEV
FQWYKDNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENAETL
SHLLYRDVTGAVKHIGDEPFSDFMKTARRLTILMDSGSDNVGV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005296
(703 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2057517 - symbol:ARF10 "auxin response factor ... 1563 6.1e-194 2
TAIR|locus:2126460 - symbol:ARF16 "auxin response factor ... 1582 1.7e-162 1
TAIR|locus:2029436 - symbol:ARF17 "auxin response factor ... 886 9.6e-89 1
TAIR|locus:2204237 - symbol:ARF6 "auxin response factor 6... 501 3.8e-80 4
TAIR|locus:2152642 - symbol:ARF8 "auxin response factor 8... 519 6.2e-80 3
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 509 1.0e-79 3
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 474 8.8e-74 3
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 460 8.2e-73 3
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 478 4.7e-72 3
TAIR|locus:2025991 - symbol:ARF1 "auxin response factor 1... 452 2.7e-70 3
TAIR|locus:2057609 - symbol:ETT "ETTIN" species:3702 "Ara... 514 4.2e-69 2
TAIR|locus:2175098 - symbol:ARF4 "auxin response factor 4... 465 4.3e-67 4
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 470 5.3e-67 3
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 460 1.8e-61 2
TAIR|locus:2026145 - symbol:ARF12 "auxin response factor ... 395 9.3e-54 3
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 379 3.7e-53 3
TAIR|locus:2036288 - symbol:ARF22 "auxin response factor ... 388 6.0e-53 3
TAIR|locus:2014731 - symbol:ARF14 "auxin response factor ... 397 3.9e-52 3
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 363 1.1e-51 3
TAIR|locus:2008991 - symbol:ARF13 "AUXIN RESPONSE FACTOR ... 358 1.8e-45 3
TAIR|locus:2037169 - symbol:ARF23 "auxin response factor ... 329 6.9e-29 1
TAIR|locus:2039165 - symbol:ABS2 "ABNORMAL SHOOT 2" speci... 164 8.8e-10 1
TAIR|locus:2041404 - symbol:NGA1 "NGATHA1" species:3702 "... 166 2.1e-09 1
TAIR|locus:2085969 - symbol:EDF3 "ethylene response DNA b... 161 1.0e-08 1
TAIR|locus:2205319 - symbol:RAV1 "related to ABI3/VP1 1" ... 161 1.1e-08 1
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 131 1.4e-07 1
TAIR|locus:2200950 - symbol:NGA3 "NGATHA3" species:3702 "... 151 1.6e-07 1
TAIR|locus:2117007 - symbol:NGA4 "NGATHA4" species:3702 "... 153 1.7e-07 2
TAIR|locus:2012438 - symbol:RAV2 "related to ABI3/VP1 2" ... 146 5.5e-07 1
TAIR|locus:2079537 - symbol:NGA2 "NGATHA2" species:3702 "... 143 1.3e-06 2
TAIR|locus:2031185 - symbol:TEM1 "TEMPRANILLO 1" species:... 139 3.4e-06 1
TAIR|locus:2080782 - symbol:AT3G11580 species:3702 "Arabi... 134 5.9e-06 1
TAIR|locus:2164215 - symbol:DPA4 "DEVELOPMENT-RELATED PcG... 134 6.9e-06 1
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 123 1.7e-05 1
TAIR|locus:2064417 - symbol:HSI2 "high-level expression o... 125 0.00039 1
>TAIR|locus:2057517 [details] [associations]
symbol:ARF10 "auxin response factor 10" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0048829 "root cap
development" evidence=IGI;IMP] [GO:0051301 "cell division"
evidence=IGI] [GO:0009734 "auxin mediated signaling pathway"
evidence=IMP] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=IMP] [GO:0009743 "response to carbohydrate
stimulus" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048441 "petal development" evidence=IMP] [GO:0048442 "sepal
development" evidence=IMP] [GO:0048589 "developmental growth"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009738
GO:GO:0009734 GO:GO:0051301 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0048589 GO:GO:0009743
GO:GO:0048441 GO:GO:0048442 GO:GO:0010154 GO:GO:0035198
GO:GO:0048366 GO:GO:0007389 EMBL:AF099735 EMBL:AC006283
EMBL:AF325073 EMBL:AF336919 EMBL:EU550097 EMBL:EU550098
EMBL:EU550099 EMBL:EU550100 EMBL:EU550101 EMBL:EU550102
EMBL:EU550103 EMBL:EU550104 EMBL:EU550105 EMBL:EU550106
EMBL:EU550107 EMBL:EU550108 EMBL:EU550109 EMBL:EU550110
EMBL:EU550111 EMBL:EU550112 EMBL:EU550113 EMBL:EU550114
EMBL:EU550115 EMBL:EU550116 EMBL:EU550117 EMBL:EU550118
EMBL:EU550119 EMBL:AK228534 IPI:IPI00530405 PIR:G84683
RefSeq:NP_180402.1 UniGene:At.13730 ProteinModelPortal:Q9SKN5
SMR:Q9SKN5 IntAct:Q9SKN5 STRING:Q9SKN5 PRIDE:Q9SKN5
EnsemblPlants:AT2G28350.1 GeneID:817382 KEGG:ath:AT2G28350
GeneFarm:3383 TAIR:At2g28350 eggNOG:NOG315592 InParanoid:Q9SKN5
OMA:ERESGRC PhylomeDB:Q9SKN5 ProtClustDB:CLSN2913131
ArrayExpress:Q9SKN5 Genevestigator:Q9SKN5 GermOnline:AT2G28350
GO:GO:0031540 Uniprot:Q9SKN5
Length = 693
Score = 1563 (555.3 bits), Expect = 6.1e-194, Sum P(2) = 6.1e-194
Identities = 335/560 (59%), Positives = 389/560 (69%)
Query: 13 EVEKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPYILCRVS 72
E EK LD QLWHACAG MVQ+P +NS VFYF QGH EHA P DF + R+PP ILCRV
Sbjct: 2 EQEKSLDPQLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHA-PRVPPLILCRVV 60
Query: 73 PIKFMADPETDEVYAKIKLVPVSTNDPDFDNDD--GIAGIHSNET---QDKPASFAKTLT 127
+KF+AD ETDEV+AKI L+P+ ND D +ND G+ S+ ++KPASFAKTLT
Sbjct: 61 SVKFLADAETDEVFAKITLLPLPGNDLDLENDAVLGLTPPSSDGNGNGKEKPASFAKTLT 120
Query: 128 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 187
QSDANNGGGFSVPRYCAETIFPRLDYSA+PPVQT++AKD+HGETWKFRHIYRGTPRRHLL
Sbjct: 121 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLL 180
Query: 188 TTGWSTFVNHKKLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXPEVTSGWNGNCVTPYGG 247
TTGWSTFVN KKL+AGDSIVFLR+E+GDLCV G N PY G
Sbjct: 181 TTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRAKRGGL-------GSNAGSDNPYPG 233
Query: 248 FSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESVIEAATLAANRQPFEVVYY 307
FS FLR DD A G+VR E+V EA AA Q FEVVYY
Sbjct: 234 FSGFLR-DDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYY 292
Query: 308 PRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVSDPLYWP 367
PRASTPEFCVKA+ V++A++IRWCSGMRFKMAFETEDSSRISWFMGT+S+VQV+DP+ WP
Sbjct: 293 PRASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWP 352
Query: 368 DSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPPRKKSRLPQPPDFPLD 427
+SPWRLLQV WDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP RKK R+PQP +FP
Sbjct: 353 NSPWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSP-RKKIRIPQPFEFPFH 411
Query: 428 G-QLPM--PSFSGSLLGPNSPFGCLPDNT-PAGMQGARHAH--YGLS----LSDLHLNKL 477
G + P+ P F+ + G + + +N PAG+QGAR A +G LSDL+L+
Sbjct: 412 GTKFPIFSPGFANNGGGESMCYLSNDNNNAPAGIQGARQAQQLFGSPSPSLLSDLNLSSY 471
Query: 478 QSGL---SPAGF-PPFDRAAKPTRASNSPILQKPSMSENISCLLTMSHST--QPSKKA-D 530
SPA F F+ +A +S S NISC LTM + Q KK+
Sbjct: 472 TGNNKLHSPAMFLSSFNPRHHHYQARDS------ENSNNISCSLTMGNPAMVQDKKKSVG 525
Query: 531 DLKTPQLVLFGKPILTEQQM 550
+KT Q VLFG+PILTEQQ+
Sbjct: 526 SVKTHQFVLFGQPILTEQQV 545
Score = 338 (124.0 bits), Expect = 6.1e-194, Sum P(2) = 6.1e-194
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 615 LETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIEN-AETLSHLLYRDVTGAVK 673
LETGHCKVFMESEDVGRTLDLS++GSY ELY+KLAEMF IE ++ L+H++YRD G +K
Sbjct: 578 LETGHCKVFMESEDVGRTLDLSVIGSYQELYRKLAEMFHIEERSDLLTHVVYRDANGVIK 637
Query: 674 HIGDEPFSDFMKTARRLTILMDSGSDNV 701
IGDEPFSDFMK +RLTI MD G DNV
Sbjct: 638 RIGDEPFSDFMKATKRLTIKMDIGGDNV 665
>TAIR|locus:2126460 [details] [associations]
symbol:ARF16 "auxin response factor 16" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0035198 "miRNA binding" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=IDA] [GO:0009733 "response to auxin
stimulus" evidence=IEP] [GO:0048829 "root cap development"
evidence=IGI;IMP] [GO:0051301 "cell division" evidence=IGI]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0051301 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL161576 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0048829 GO:GO:0035198 GO:GO:0007389
HOGENOM:HOG000241141 eggNOG:NOG315592 EMBL:AL078464 EMBL:AY059792
EMBL:AY091198 EMBL:EU550120 EMBL:EU550121 EMBL:EU550122
EMBL:EU550123 EMBL:EU550124 EMBL:EU550125 EMBL:EU550126
EMBL:EU550127 EMBL:EU550128 EMBL:EU550129 EMBL:EU550130
EMBL:EU550131 EMBL:EU550132 EMBL:EU550133 EMBL:EU550134
EMBL:EU550135 EMBL:EU550136 EMBL:EU550137 EMBL:EU550138
EMBL:EU550139 EMBL:EU550140 EMBL:EU550141 EMBL:EU550142
EMBL:EU550143 IPI:IPI00528149 PIR:T08984 RefSeq:NP_567841.1
UniGene:At.3365 ProteinModelPortal:Q93YR9 SMR:Q93YR9 IntAct:Q93YR9
STRING:Q93YR9 EnsemblPlants:AT4G30080.1 GeneID:829131
KEGG:ath:AT4G30080 GeneFarm:3406 TAIR:At4g30080 InParanoid:Q93YR9
OMA:GHAENAY PhylomeDB:Q93YR9 ProtClustDB:CLSN2917636
Genevestigator:Q93YR9 GermOnline:AT4G30080 Uniprot:Q93YR9
Length = 670
Score = 1582 (562.0 bits), Expect = 1.7e-162, P = 1.7e-162
Identities = 347/606 (57%), Positives = 410/606 (67%)
Query: 15 EKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPYILCRVSPI 74
EK LD QLWHACAGGMV+MPP+NS+VFYFPQGHAE+A VDF + IPP +LCRV I
Sbjct: 13 EKGLDPQLWHACAGGMVRMPPMNSKVFYFPQGHAENAYDCVDFGNLP-IPPMVLCRVLAI 71
Query: 75 KFMADPETDEVYAKIKLVPVSTND-PDFDNDDG--IAGIHSNETQDKPASFAKTLTQSDA 131
K+MAD E+DEV+AK++L+P+ ++ D + DG G SN +K SFAKTLTQSDA
Sbjct: 72 KYMADAESDEVFAKLRLIPLKDDEYVDHEYGDGEDSNGFESNS--EKTPSFAKTLTQSDA 129
Query: 132 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 191
NNGGGFSVPRYCAETIFPRLDY+A+PPVQTILAKDVHG+ WKFRHIYRGTPRRHLLTTGW
Sbjct: 130 NNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGW 189
Query: 192 STFVNHKKLVAGDSIVFLRAENGDLCVXXXXXXXXXXXX-PEVTSGWN---GNCVTPYGG 247
S FVN KKLVAGDSIVF+RAENGDLCV PE ++GWN G+C G
Sbjct: 190 SNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNGPEYSAGWNPIGGSC-----G 244
Query: 248 FSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESVIEAATLAANRQPFEVVYY 307
+S+ LRED++ +R KGKV ESVIEAATLA + +PFEVVYY
Sbjct: 245 YSSLLREDESNSLRRSNCSLADR----------KGKVTAESVIEAATLAISGRPFEVVYY 294
Query: 308 PRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVSDPLYWP 367
PRAST EFCVKA +AA++I WCSGMRFKMAFETEDSSRISWFMGT+S+V VSDP+ WP
Sbjct: 295 PRASTSEFCVKALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWP 354
Query: 368 DSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPPRKKSRLPQPPDFP-L 426
+SPWRLLQV WDEPDLLQNVKRV+PWLVELVSN+ I L+ FSPPRKK RLPQ PD+ L
Sbjct: 355 NSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQHPDYNNL 414
Query: 427 DGQLPMPSFSGSLLGPNSPFGCLPDNTPAGMQGARH-AH--YGLSLSDLHLNKLQSGLSP 483
+P+PSF + L +SP + DN P G+QGARH AH YGLS SDLH L P
Sbjct: 415 INSIPVPSFPSNPLIRSSPLSSVLDNVPVGLQGARHNAHQYYGLSSSDLHHYYLNRPPPP 474
Query: 484 AGFPPFDRAAKPTRASNSPILQKPSMSENISCLLTMSHSTQPSKKADDLKTPQLVLFGKP 543
PP P+ + I K +E C LTM T P K+ +VLFGK
Sbjct: 475 P--PPSSLQLSPSLGLRN-IDTK---NEKGFCFLTMG--TTPCNDTKSKKS-HIVLFGKL 525
Query: 544 ILTEQQMSHSCSGDTVSPVRTGNSSSEGNLDKLTN--FSDGS-GSALQQQ-----GLPDR 595
IL E+Q+S S DT + +T SS N + + FS GS ++ GL +
Sbjct: 526 ILPEEQLSEKGSTDTANIEKTQISSGGSNQNGVAGREFSSSDEGSPCSKKVHDASGL-ET 584
Query: 596 SFCEVF 601
C+VF
Sbjct: 585 GHCKVF 590
Score = 383 (139.9 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 95/211 (45%), Positives = 132/211 (62%)
Query: 495 PTRASNSPILQKPSM-SENISCLLTMSHSTQPSKKADDLKTPQLVLFGKPILTEQQMSHS 553
P+ SP L ++ ++N ++ T P K+ +VLFGK IL E+Q+S
Sbjct: 477 PSSLQLSPSLGLRNIDTKNEKGFCFLTMGTTPCNDTKSKKS-HIVLFGKLILPEEQLSEK 535
Query: 554 CSGDTVSPVRTGNSSSEGNLDKLTNFSDGSGSALQQQGLPDRSFCEVFQWYKDNRQETEP 613
S DT N++K T S G GS Q G+ R F + +++ +
Sbjct: 536 GSTDTA------------NIEK-TQISSG-GS--NQNGVAGREFSSSDEGSPCSKKVHDA 579
Query: 614 S-LETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENAETLSHLLYRDVTGAV 672
S LETGHCKVFMES+DVGRTLDLS+LGSY+EL +KL++MFGI+ +E LS +LYRD +GA+
Sbjct: 580 SGLETGHCKVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIKKSEMLSSVLYRDASGAI 639
Query: 673 KHIGDEPFSDFMKTARRLTILMDSGSDNVGV 703
K+ G+EPFS+F+KTARRLTIL + GS++V V
Sbjct: 640 KYAGNEPFSEFLKTARRLTILTEQGSESVVV 670
>TAIR|locus:2029436 [details] [associations]
symbol:ARF17 "auxin response factor 17" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=IMP] [GO:0009734 "auxin mediated signaling pathway"
evidence=TAS] [GO:0048830 "adventitious root development"
evidence=IMP] [GO:0009555 "pollen development" evidence=IMP]
InterPro:IPR003340 InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0009555
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0048830 GO:GO:0009653
EMBL:AC009243 EMBL:AC012193 EMBL:AY056184 EMBL:BT002749
EMBL:EU550144 EMBL:EU550145 EMBL:EU550146 EMBL:EU550147
EMBL:EU550148 EMBL:EU550149 EMBL:EU550150 EMBL:EU550151
EMBL:EU550152 EMBL:EU550153 EMBL:EU550154 EMBL:EU550155
EMBL:EU550156 EMBL:EU550157 EMBL:EU550158 EMBL:EU550159
EMBL:EU550160 EMBL:EU550161 EMBL:EU550162 EMBL:EU550163
EMBL:EU550164 EMBL:EU550165 EMBL:EU550166 EMBL:EU550167
IPI:IPI00522722 PIR:D96808 RefSeq:NP_565161.1 UniGene:At.26363
ProteinModelPortal:Q84WU6 SMR:Q84WU6 IntAct:Q84WU6 STRING:Q84WU6
PRIDE:Q84WU6 EnsemblPlants:AT1G77850.1 GeneID:844120
KEGG:ath:AT1G77850 GeneFarm:3413 TAIR:At1g77850 eggNOG:NOG325741
OMA:IWRACAG PhylomeDB:Q84WU6 ProtClustDB:CLSN2689276
Genevestigator:Q84WU6 GermOnline:AT1G77850 Uniprot:Q84WU6
Length = 585
Score = 886 (316.9 bits), Expect = 9.6e-89, P = 9.6e-89
Identities = 225/581 (38%), Positives = 306/581 (52%)
Query: 18 LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPYILCRVSPIKFM 77
+D +W ACAG VQ+P ++SRV+YFPQGH EH C + P + C ++ I+ +
Sbjct: 16 VDPTIWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP--VPCIITSIQLL 73
Query: 78 ADPETDEVYAKIKLVPVS------TNDPDFDNDDGIAGIHSNETQDKPASFAKTLTQSDA 131
ADP TDEV+A + L P++ TN F DG + N +K +FAK LT SDA
Sbjct: 74 ADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDG--DVDDN---NKVTTFAKILTPSDA 128
Query: 132 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 191
NNGGGFSVPR+CA+++FP L++ DPPVQ + D+HG W FRHIYRGTPRRHLLTTGW
Sbjct: 129 NNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGW 188
Query: 192 STFVNHKKLVAGDSIVFLRAENGDLCVXXXXXXXXXXXXPEVTSGWNGNCVTPYGGFSAF 251
S FVN KKL+AGDS+VF+R ++ + +S + G+ Y S+
Sbjct: 189 SKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGG--SSYYGGDEYNGYYSQSSV 246
Query: 252 LREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESVIEAATLAANRQPFEVVYYPRAS 311
+EDD + GK+ E+V +A A+ PFEVV+YP A
Sbjct: 247 AKEDDGSPKKTFRRS-------------GNGKLTAEAVTDAINRASQGLPFEVVFYPAAG 293
Query: 312 TPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSV-QVSDPLYWPDSP 370
EF V+A V++++ + W G R KMA ETEDSSRI+WF G +SS Q + P W SP
Sbjct: 294 WSEFVVRAEDVESSMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGP--WRGSP 351
Query: 371 WRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPPRKKSRLPQPPDFPLD-GQ 429
W+ LQ+TWDEP++LQNVKRV+PW VE+ ++ +H R K P D G+
Sbjct: 352 WKQLQITWDEPEILQNVKRVNPWQVEIAAHATQLHTPFPPAKRLKYPQPGGGFLSGDDGE 411
Query: 430 LPMPSFSG--SLLGPN-SPFGCLPDNTPAGMQGARHAHYGLSLSDLHL---NKLQ----S 479
+ P SG S P+ SP PAGMQGAR +G S + N Q +
Sbjct: 412 ILYPQ-SGLSSAAAPDPSPSMFSYSTFPAGMQGARQYDFG-SFNPTGFIGGNPPQLFTNN 469
Query: 480 GLSPAGFPPFDRAAKPTRASNSPILQKPSMSENISCLLTMSHSTQPSKKADDLKTPQLVL 539
LSP P + + SP S + N + L + + ++ K + L
Sbjct: 470 FLSP--LPDLGKVSTEMMNFGSPPSDNLSPNSNTTNL-SSGNDLVGNRGPLSKKVNSIQL 526
Query: 540 FGKPILTEQQMSHSCSGDTVSPVRTGNSSSEGNLDKLTNFS 580
FGK I E+ HS SG S + + S E + D T S
Sbjct: 527 FGKIITVEE---HSESGPAESGLCEEDGSKESS-DNETQLS 563
>TAIR|locus:2204237 [details] [associations]
symbol:ARF6 "auxin response factor 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0009908 "flower development"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009855 "determination of bilateral symmetry" evidence=RCA]
[GO:0009886 "post-embryonic morphogenesis" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010014
"meristem initiation" evidence=RCA] [GO:0010051 "xylem and phloem
pattern formation" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC025295
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 HOGENOM:HOG000241141 EMBL:AF013467 EMBL:AY669788
EMBL:EU550049 EMBL:EU550050 EMBL:EU550051 EMBL:EU550052
EMBL:EU550053 EMBL:EU550054 EMBL:EU550055 EMBL:EU550056
EMBL:EU550057 EMBL:EU550058 EMBL:EU550059 EMBL:EU550060
EMBL:EU550061 EMBL:EU550062 EMBL:EU550063 EMBL:EU550064
EMBL:EU550065 EMBL:EU550066 EMBL:EU550067 EMBL:EU550068
EMBL:EU550069 EMBL:EU550070 EMBL:EU550071 EMBL:EU550072
IPI:IPI00533211 IPI:IPI00656643 PIR:F86427 RefSeq:NP_001031115.1
RefSeq:NP_174323.1 UniGene:At.21939 ProteinModelPortal:Q9ZTX8
SMR:Q9ZTX8 IntAct:Q9ZTX8 STRING:Q9ZTX8 PaxDb:Q9ZTX8 PRIDE:Q9ZTX8
EnsemblPlants:AT1G30330.2 GeneID:839913 KEGG:ath:AT1G30330
GeneFarm:3369 TAIR:At1g30330 eggNOG:NOG288258 InParanoid:Q9ZTX8
OMA:ANSHWRS PhylomeDB:Q9ZTX8 ProtClustDB:CLSN2686713
Genevestigator:Q9ZTX8 GermOnline:AT1G30330 Uniprot:Q9ZTX8
Length = 935
Score = 501 (181.4 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 97/208 (46%), Positives = 132/208 (63%)
Query: 15 EKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIP------PYIL 68
++ L+S+LWHACAG +V +PPV SRV YFPQGH+E + IP P ++
Sbjct: 19 KRVLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLI 78
Query: 69 CRVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPASFAKTLTQ 128
C++ + AD ETDEVYA++ L P++ + G+ S + + F KTLT
Sbjct: 79 CQLHNVTMHADVETDEVYAQMTLQPLNAQEQKDPYLPAELGVPSRQPTNY---FCKTLTA 135
Query: 129 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 188
SD + GGFSVPR AE +FP LDYS PP Q ++A+D+H WKFRHI+RG P+RHLLT
Sbjct: 136 SDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLT 195
Query: 189 TGWSTFVNHKKLVAGDSIVFLRAENGDL 216
TGWS FV+ K+LVAGDS++F+ + L
Sbjct: 196 TGWSVFVSAKRLVAGDSVLFIWNDKNQL 223
Score = 236 (88.1 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 58/135 (42%), Positives = 75/135 (55%)
Query: 292 AATLAANRQPFEVVYYPRASTPEFCVK-ASMVKAALQIRWCSGMRFKMAFETEDSSRISW 350
AA AA F + Y PRAS EF + A VKA R GMRF+M FETE+SS +
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESS-VRR 313
Query: 351 FMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFS 410
+MGTI+ + DP W +S WR ++V WDE + RVS W +E ++ P ++ SPF
Sbjct: 314 YMGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSPF- 371
Query: 411 PPRKKSRLPQPPDFP 425
P R K P PP P
Sbjct: 372 PLRLKR--PWPPGLP 384
Score = 101 (40.6 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 31/102 (30%), Positives = 49/102 (48%)
Query: 606 DNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIEN-----AETL 660
+N P T KV+ +S GR+LD+S SY EL +LA MFG+E +
Sbjct: 786 ENLGSENPQSNT-FVKVY-KSGSFGRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSG 843
Query: 661 SHLLYRDVTGAVKHIGDEPFSDFMKTARRLTILMDSGSDNVG 702
L++ D V +GD+P+ +F+ + + IL +G
Sbjct: 844 WQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQMG 885
Score = 41 (19.5 bits), Expect = 3.8e-80, Sum P(4) = 3.8e-80
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 548 QQMSHSCSGDTVSPVRTGNSSSEGNLDKLTNFSDGSGSAL 587
Q M+ C + S GN+ L+NFS S L
Sbjct: 598 QSMTSLCHQQSFSDTNGGNNPISPLHTLLSNFSQDESSQL 637
>TAIR|locus:2152642 [details] [associations]
symbol:ARF8 "auxin response factor 8" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS;TAS]
[GO:0009733 "response to auxin stimulus" evidence=IMP] [GO:0009908
"flower development" evidence=IGI] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009886 "post-embryonic
morphogenesis" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0009909 "regulation of flower development"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009908 HOGENOM:HOG000241141
ProtClustDB:CLSN2686713 EMBL:AF042196 EMBL:AY669790 EMBL:AB024026
IPI:IPI00525703 IPI:IPI00846789 RefSeq:NP_001078672.1
RefSeq:NP_198518.1 UniGene:At.23446 ProteinModelPortal:Q9FGV1
SMR:Q9FGV1 IntAct:Q9FGV1 STRING:Q9FGV1 PaxDb:Q9FGV1 PRIDE:Q9FGV1
EnsemblPlants:AT5G37020.1 GeneID:833672 KEGG:ath:AT5G37020
GeneFarm:3372 TAIR:At5g37020 eggNOG:NOG292968 InParanoid:Q9FGV1
OMA:NDAYLPA PhylomeDB:Q9FGV1 Genevestigator:Q9FGV1
GermOnline:AT5G37020 Uniprot:Q9FGV1
Length = 811
Score = 519 (187.8 bits), Expect = 6.2e-80, Sum P(3) = 6.2e-80
Identities = 102/211 (48%), Positives = 138/211 (65%)
Query: 13 EVEKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGP----VD--FRSCRRIPPY 66
E EKCL+S+LWHACAG +V +P SRV YFPQGH+E VD + +PP
Sbjct: 14 EGEKCLNSELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQ 73
Query: 67 ILCRVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPAS-FAKT 125
++C++ + AD ETDEVYA++ L P++ P+ + + I +P++ F KT
Sbjct: 74 LICQLHNVTMHADVETDEVYAQMTLQPLT---PE-EQKETFVPIELGIPSKQPSNYFCKT 129
Query: 126 LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRH 185
LT SD + GGFSVPR AE +FP LDY+ PP Q ++A+D+H WKFRHI+RG P+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRH 189
Query: 186 LLTTGWSTFVNHKKLVAGDSIVFLRAENGDL 216
LLTTGWS FV+ K+LVAGDS++F+R E L
Sbjct: 190 LLTTGWSVFVSAKRLVAGDSVIFIRNEKNQL 220
Score = 231 (86.4 bits), Expect = 6.2e-80, Sum P(3) = 6.2e-80
Identities = 105/400 (26%), Positives = 171/400 (42%)
Query: 233 VTSGWNG--NCVTPYGGFSA-FLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GW+ + G S F+R + N+L +++ + +
Sbjct: 191 LTTGWSVFVSAKRLVAGDSVIFIRNEKNQLF-LGIRHATRPQTIVPSSVLSSDSMHIGLL 249
Query: 290 IEAATLAANRQPFEVVYYPRASTPEFCVKASM-VKAALQIRWCSGMRFKMAFETEDSSRI 348
AA +A F V ++PRAS EF ++ S +KA R GMRF+M FETE+SS +
Sbjct: 250 AAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESS-V 308
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSP 408
+MGTI+ + D + WP+S WR ++V WDE + RVS W +E ++ P ++ S
Sbjct: 309 RRYMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-MYPSL 367
Query: 409 FSPPRKKSRLPQPPDFPLDGQLPMPSFSGSLLGPNSPF-GCLPDNTPA-GM-----QGAR 461
F K+ P DG+ + S L G G LP N P+ G+ Q
Sbjct: 368 FPLRLKRPWHAGTSSLP-DGRGDLGSGLTWLRGGGGEQQGLLPLNYPSVGLFPWMQQRLD 426
Query: 462 HAHYGLSLSDLHLNKLQSGLSP-AGFPPFDRAAKPTRASNSPILQKPSMSENISCLLTMS 520
+ G + + L +GL G P + + + LQ+ S S N +L
Sbjct: 427 LSQMGTDNNQQYQAMLAAGLQNIGGGDPLRQQFVQLQEPHHQYLQQ-SASHNSDLMLQQQ 485
Query: 521 HSTQPSKKADDLKTPQLVLFGKPILT-EQQMSHSCSGDTVSPVRTGNSSSEGNLDKLTNF 579
Q S+ +T Q++ P Q++S+ +G ++ + ++ N K+ N
Sbjct: 486 QQQQASRHLMHAQT-QIMSENLPQQNMRQEVSNQPAGQQ-QQLQQPDQNAYLNAFKMQN- 542
Query: 580 SDGSGSALQQQG-LPDRSFCEVFQWYKDNRQETEPSLETG 618
G QQQ +P SF + N+ T S +G
Sbjct: 543 --GHLQQWQQQSEMPSPSFMKSDFTDSSNKFATTASPASG 580
Score = 99 (39.9 bits), Expect = 6.2e-80, Sum P(3) = 6.2e-80
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 621 KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA--ETLS---HLLYRDVTGAVKHI 675
KV+ +S VGR+LD+S SY EL ++L +MF IE + L L++ D + +
Sbjct: 709 KVY-KSGSVGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLL 767
Query: 676 GDEPFSDFMKTARRLTILMDSGSDNVG 702
GD+P+ F+ + IL +G
Sbjct: 768 GDDPWESFVNNVWYIKILSPEDVHQMG 794
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 509 (184.2 bits), Expect = 1.0e-79, Sum P(3) = 1.0e-79
Identities = 103/208 (49%), Positives = 134/208 (64%)
Query: 15 EKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPV----DF-RSCRRIPPYILC 69
+K ++SQLWHACAG +V +PPV S V YFPQGH+E + DF + +P ++C
Sbjct: 17 KKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLIC 76
Query: 70 RVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPASF-AKTLTQ 128
+ + AD ETDEVYA++ L PV+ +D + +A + +P F KTLT
Sbjct: 77 LLHSVTLHADTETDEVYAQMTLQPVNK----YDREALLASDMGLKLNRQPTEFFCKTLTA 132
Query: 129 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 188
SD + GGFSVPR AE IFP LD+S PP Q I+AKD+H TW FRHIYRG P+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLT 192
Query: 189 TGWSTFVNHKKLVAGDSIVFLRAENGDL 216
TGWS FV+ K+L AGDS++F+R E L
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFVRDEKSQL 220
Score = 247 (92.0 bits), Expect = 1.0e-79, Sum P(3) = 1.0e-79
Identities = 87/292 (29%), Positives = 133/292 (45%)
Query: 233 VTSGWNGNCVTP--YGGFSA-FLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GW+ T + G S F+R++ ++LM +++ + +
Sbjct: 191 LTTGWSVFVSTKRLFAGDSVLFVRDEKSQLM-LGIRRANRQTPTLSSSVISSDSMHIGIL 249
Query: 290 IEAATLAANRQPFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRIS 349
AA AN PF + + PRAS EF V + AL + GMRF+M FETED +
Sbjct: 250 AAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCG-VR 308
Query: 350 WFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPF 409
+MGT++ + DP+ W S WR LQV WDE RVS W +E V + ++ P
Sbjct: 309 RYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPV--ITPFYICP- 365
Query: 410 SPPRKKSRLPQPPDFPLDGQLPMPS-FSGSLLGPNSPFGCLPDNTPAGMQGARHAHY-GL 467
PP + + P+ P P D +L M + F ++ FG M+ A+ + + GL
Sbjct: 366 -PPFFRPKYPRQPGMP-DDELDMENAFKRAMPWMGEDFG---------MKDAQSSMFPGL 414
Query: 468 SLSDLHLNKLQSGLSPAGFPPFDRAAK----PTR-ASNSP--IL--QKPSMS 510
SL + + LS + P A P ASN P +L Q P++S
Sbjct: 415 SLVQWMSMQQNNPLSGSATPQLPSALSSFNLPNNFASNDPSKLLNFQSPNLS 466
Score = 107 (42.7 bits), Expect = 1.0e-79, Sum P(3) = 1.0e-79
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 629 VGRTLDLSLLGSYDELYKKLAEMFGIENA--ETLSH---LLYRDVTGAVKHIGDEPFSDF 683
VGR++D++ YDEL LA MFGIE + L+ L+Y D + +GD+P+ +F
Sbjct: 969 VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEF 1028
Query: 684 MKTARRLTIL 693
+ + + IL
Sbjct: 1029 VNCVQNIKIL 1038
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 474 (171.9 bits), Expect = 8.8e-74, Sum P(3) = 8.8e-74
Identities = 100/208 (48%), Positives = 126/208 (60%)
Query: 18 LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEH---ACGPVDFRSCRRI---PPYILCRV 71
L +LW CAG +V +P RV+YFPQGH E + VD + + + PP ILC V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 72 SPIKFMADPETDEVYAKIKLVPVSTN-DPDFDNDDGIAGIHSNETQDKPASFAKTLTQSD 130
+ A+ +TDEVYA+I L+PV T D D + + K SF+K LT SD
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIPVGTEVDEPMSPDPSPPELQ----RPKVHSFSKVLTASD 124
Query: 131 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 190
+ GGFSV R A P LD + P Q ++A+DVHG WKF+HI+RG PRRHLLTTG
Sbjct: 125 TSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHIFRGQPRRHLLTTG 184
Query: 191 WSTFVNHKKLVAGDSIVFLRAENGDLCV 218
WSTFV K+LVAGD+ VFLR ENG+L V
Sbjct: 185 WSTFVTSKRLVAGDTFVFLRGENGELRV 212
Score = 200 (75.5 bits), Expect = 8.8e-74, Sum P(3) = 8.8e-74
Identities = 101/378 (26%), Positives = 152/378 (40%)
Query: 233 VTSGWNGNCVTPY----GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPES 288
+T+GW+ VT G FLR ++ +L R +++ +
Sbjct: 181 LTTGWS-TFVTSKRLVAGDTFVFLRGENGEL-RVGVRRANLQQSSMPSSVISSHSMHL-G 237
Query: 289 VIEAATLAANRQPFEVVYY-PRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSR 347
V+ A A + +VYY PR S +F + + A+ ++ GMRFKM FE EDS
Sbjct: 238 VLATARHATQTKTMFIVYYKPRTS--QFIISLNKYLEAMSNKFSVGMRFKMRFEGEDSPE 295
Query: 348 ISWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLS 407
+ GT+ V+ P +W DS WR L+V WDEP + +VSPW +E N +
Sbjct: 296 RR-YSGTVIGVKDCSP-HWKDSKWRCLEVHWDEPASISRPNKVSPWEIEPFVNSENV--- 350
Query: 408 PFSPPRKKSRLPQPPDFP-LDGQLPMPSFSGSLLGPNSPFG--CLPDNTPAGMQGARHAH 464
P S K R Q + LD + + S+L F C+ + Q R A+
Sbjct: 351 PKSVMLKNKRPRQVSEVSALDVGITASNLWSSVLTQPHEFAQSCITSQWSSPQQCHRDAN 410
Query: 465 YGLSLSDLHLNKLQSGLSPAGFPPFDRAAKPTRASNSPILQK-PSMSENISCL---LTMS 520
SD LN S + A D S P+ QK P + N L S
Sbjct: 411 EDAKKSDW-LNNSYSVSNVAK----DSTLNDQMVS--PVEQKKPETTANYRLFGIDLMSS 463
Query: 521 HSTQPSKKADDLKTPQLVLFGKPILTEQQMSHSCSGDTVSPVRTGNSS--SEGN---LDK 575
P +K ++ P + KP + SHS +S V +EG+ +
Sbjct: 464 SLAVPEEKTAPMR-P--INISKPTMD----SHSDPKSEISKVSEEKKQEPAEGSPKEVQS 516
Query: 576 LTNFSDGSGSALQQQGLP 593
+ S S + +Q QG+P
Sbjct: 517 KQSSSTRSRTKVQMQGVP 534
Score = 102 (41.0 bits), Expect = 8.8e-74, Sum P(3) = 8.8e-74
Identities = 24/87 (27%), Positives = 44/87 (50%)
Query: 609 QETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIEN---AETLSHLLY 665
Q + S KV M+ VGR +DL+ L Y+EL + ++F I+ + +++
Sbjct: 515 QSKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQWEIVF 574
Query: 666 RDVTGAVKHIGDEPFSDFMKTARRLTI 692
D G + +GD+P+ +F +R+ I
Sbjct: 575 TDDEGDMMLVGDDPWPEFCNMVKRIFI 601
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 460 (167.0 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 99/207 (47%), Positives = 123/207 (59%)
Query: 18 LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVD--FRSCR----RIPPYILCRV 71
L ++LW CAG +V++P RVFYFPQGH E + S +PP ILCRV
Sbjct: 22 LYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVFDLPPKILCRV 81
Query: 72 SPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPASFAKTLTQSDA 131
+ A+ ETDEVYA+I L P D I G T+ + SF K LT SD
Sbjct: 82 LDVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPIVG----PTKQEFHSFVKILTASDT 137
Query: 132 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 191
+ GGFSV R A P LD + P Q ++ +D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 138 STHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRFKHIFRGQPRRHLLTTGW 197
Query: 192 STFVNHKKLVAGDSIVFLRAENGDLCV 218
STFV+ K+LVAGD+ VFLR ENGDL V
Sbjct: 198 STFVSSKRLVAGDAFVFLRGENGDLRV 224
Score = 185 (70.2 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 57/155 (36%), Positives = 79/155 (50%)
Query: 289 VIEAATLAANRQPFEVVYY-PRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDS-S 346
V+ A+ A VV+Y PR S +F V + A++ + G RF+M FE E+S
Sbjct: 250 VLATASHAVRTTTIFVVFYKPRIS--QFIVGVNKYMEAIKHGFSLGTRFRMRFEGEESPE 307
Query: 347 RISWFMGTI-SSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPTI 404
RI F GTI S +S WP S WR LQV WDEP +Q +VSPW +E ++ P
Sbjct: 308 RI--FTGTIVGSGDLSSQ--WPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 363
Query: 405 HLSPFSPPRKKSRLPQPPDFPLDGQLPMPSFSGSL 439
+P P+ K + +P + + P PSF SL
Sbjct: 364 --TPAQQPQSKCKRSRPIEPSVKTPAP-PSFLYSL 395
Score = 127 (49.8 bits), Expect = 8.2e-73, Sum P(3) = 8.2e-73
Identities = 44/133 (33%), Positives = 68/133 (51%)
Query: 564 TGNSSSEGNLDKLTNFSDGSGSALQQQGLPDRSFCEVFQWYKDNRQETEPSLETGHCKVF 623
T NS + DK D G+A Q+ + S E +Q+T S KV
Sbjct: 448 TSNSPAPIPQDKQP--MDTCGAAKCQEPITPTSMSE------QKKQQTSRS----RTKVQ 495
Query: 624 MESEDVGRTLDLSLLGSYDELYKKLAEMFGIENAETLSH----LLYRDVTGAVKHIGDEP 679
M+ VGR +DL+LL SYDEL +L EMF I+ + L+ +++ D G + GD+P
Sbjct: 496 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQG-QLLARDKWIVVFTDDEGDMMLAGDDP 554
Query: 680 FSDFMKTARRLTI 692
+++F K A+++ I
Sbjct: 555 WNEFCKMAKKIFI 567
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 478 (173.3 bits), Expect = 4.7e-72, Sum P(3) = 4.7e-72
Identities = 96/208 (46%), Positives = 130/208 (62%)
Query: 18 LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPY------ILCRV 71
++S+LWHACAG +V +P V S V+YF QGH+E + ++P Y ++C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 72 SPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDD-GIAGIHSNETQDKPASFAKTLTQSD 130
+ AD ++DE+YA++ L PV + F D G+ + T+ F KTLT SD
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHSERDVFPVPDFGMLRGSKHPTE----FFCKTLTASD 166
Query: 131 ANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTG 190
+ GGFSVPR AE +FP LDYSA PP Q ++ +D+H TW FRHIYRG P+RHLLTTG
Sbjct: 167 TSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTG 226
Query: 191 WSTFVNHKKLVAGDSIVFLRAENGDLCV 218
WS FV K+L AGDS++F+R E L V
Sbjct: 227 WSLFVGSKRLRAGDSVLFIRDEKSQLMV 254
Score = 240 (89.5 bits), Expect = 4.7e-72, Sum P(3) = 4.7e-72
Identities = 63/168 (37%), Positives = 81/168 (48%)
Query: 233 VTSGWN---GNCVTPYGGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GW+ G+ G F+R++ ++LM L A + +
Sbjct: 223 LTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADS-MHIGVL 281
Query: 290 IEAATLAANRQPFEVVYYPRASTPEFCVK-ASMVKAALQIRWCSGMRFKMAFETEDSSRI 348
AA ANR PF + Y PRA EF + A KA + GMRF M FETEDS +
Sbjct: 282 AAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGKR 341
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 396
+MGTI + DPL WP S WR LQV WDEP RVSPW +E
Sbjct: 342 R-YMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIE 388
Score = 107 (42.7 bits), Expect = 4.7e-72, Sum P(3) = 4.7e-72
Identities = 40/148 (27%), Positives = 66/148 (44%)
Query: 553 SCSGDTVSPVRTGNSSSEGNLDKLTNFSDGSGSALQQQGLPDRSFCEVFQWYKDNRQE-- 610
S + D S + T S ++ +F D SG D C + Q K + +
Sbjct: 729 SFAQDVQSQI-TSASFADSQAFSRQDFPDNSGGTGTSSSNVDFDDCSLRQNSKGSSWQKI 787
Query: 611 TEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENAETLSH-----LLY 665
P + T + KV ++ VGR++D++ Y+EL + MFG+E T L+Y
Sbjct: 788 ATPRVRT-YTKV-QKTGSVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVY 845
Query: 666 RDVTGAVKHIGDEPFSDFMKTARRLTIL 693
D V +GD+P+ +F+ R + IL
Sbjct: 846 VDYESDVLLVGDDPWEEFVGCVRCIRIL 873
>TAIR|locus:2025991 [details] [associations]
symbol:ARF1 "auxin response factor 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;IDA;IPI] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0010150 "leaf
senescence" evidence=IGI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0009616 "virus
induced gene silencing" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016246
"RNA interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=IEP] InterPro:IPR003311
InterPro:IPR003340 InterPro:IPR010525 InterPro:IPR011525
Pfam:PF02309 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0010150 EMBL:AC007258 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:U83245 EMBL:AY133723 EMBL:BT002748
IPI:IPI00518211 IPI:IPI00520405 PIR:D96621 RefSeq:NP_001031208.1
RefSeq:NP_176184.1 RefSeq:NP_849830.1 UniGene:At.74832
ProteinModelPortal:Q8L7G0 SMR:Q8L7G0 IntAct:Q8L7G0 STRING:Q8L7G0
EnsemblPlants:AT1G59750.1 EnsemblPlants:AT1G59750.3 GeneID:842268
KEGG:ath:AT1G59750 GeneFarm:3363 TAIR:At1g59750 eggNOG:NOG257828
HOGENOM:HOG000241141 InParanoid:Q8L7G0 KO:K14486 OMA:QMPSFNL
PhylomeDB:Q8L7G0 ProtClustDB:CLSN2679699 Genevestigator:Q8L7G0
GermOnline:AT1G59750 Uniprot:Q8L7G0
Length = 665
Score = 452 (164.2 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 98/204 (48%), Positives = 129/204 (63%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPY-----ILCRVSPIK 75
+LWHACAG +V +P RV+YFP+GH E + +++P + ILC+V I+
Sbjct: 22 ELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKILCKVINIQ 81
Query: 76 FMADPETDEVYAKIKLVP-VSTNDPDFDNDDGIAGIHSNETQDKPASFAKTLTQSDANNG 134
A+PETDEVYA+I L+P + ++P + D A + E + SF KTLT SD +
Sbjct: 82 RRAEPETDEVYAQITLLPELDQSEPT--SPD--APVQEPE-KCTVHSFCKTLTASDTSTH 136
Query: 135 GGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTF 194
GGFSV R A+ P LD S PP Q ++A D+H W FRHI+RG PRRHLLTTGWS F
Sbjct: 137 GGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQPRRHLLTTGWSVF 196
Query: 195 VNHKKLVAGDSIVFLRAENGDLCV 218
V+ KKLVAGD+ +FLR EN +L V
Sbjct: 197 VSSKKLVAGDAFIFLRGENEELRV 220
Score = 229 (85.7 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 64/159 (40%), Positives = 82/159 (51%)
Query: 302 FEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVS 361
F V Y PR S EF V + A + GMRFKM FE E++ F GTI VQ +
Sbjct: 260 FSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEAPE-KRFSGTIVGVQEN 318
Query: 362 DPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE-LVSNMPTIHLSPFSPPRKKSRLPQ 420
W DS WR L+V WDEP + +RVSPW +E LV+N T P PP++ R P+
Sbjct: 319 KSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANS-TPSSQP-QPPQRNKR-PR 375
Query: 421 PPDFPLDGQLPMPSFSGSLLGPNSPFGCL--PDNTPAGM 457
PP LP P+ S GP +P G P +TP+ +
Sbjct: 376 PPG------LPSPATGPS--GPVTPDGVWKSPADTPSSV 406
Score = 118 (46.6 bits), Expect = 2.7e-70, Sum P(3) = 2.7e-70
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 609 QETEPSLETGHC-KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGI--ENAETLS--HL 663
QE++ S + C KV M+ VGR +DL+ Y++L+KKL EMF I E E+ +
Sbjct: 534 QESQ-SRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQV 592
Query: 664 LYRDVTGAVKHIGDEPFSDFMKTARRLTI 692
+Y D + +GD+P+++F R++ I
Sbjct: 593 VYTDDEDDMMMVGDDPWNEFCGMVRKIFI 621
Score = 63 (27.2 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 541 GKP--ILTE---QQMSHSCSGDTVSPVRTGNSS---SEGNLDKL-TNFSDGSGSALQQQG 591
GKP +L++ +++ H+C+G V+ R G EG++++L + G +
Sbjct: 9 GKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFN 68
Query: 592 LPDRSFCEVFQWYKDNRQETE 612
LP + C+V + ET+
Sbjct: 69 LPSKILCKVINIQRRAEPETD 89
>TAIR|locus:2057609 [details] [associations]
symbol:ETT "ETTIN" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0009850 "auxin
metabolic process" evidence=TAS] [GO:0010158 "abaxial cell fate
specification" evidence=IGI] [GO:0010050 "vegetative phase change"
evidence=IGI;RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0010051 "xylem and phloem pattern formation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0009733
"response to auxin stimulus" evidence=ISS] InterPro:IPR003340
InterPro:IPR010525 Pfam:PF02362 Pfam:PF06507 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0009733 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0009850 GO:GO:0010050 HOGENOM:HOG000241141
KO:K14486 EMBL:U89296 EMBL:AF007788 EMBL:U78721 EMBL:AF336917
EMBL:AF360313 EMBL:AY056365 EMBL:AB199791 IPI:IPI00527337
PIR:E84750 PIR:T03278 RefSeq:NP_180942.1 UniGene:At.10360
ProteinModelPortal:O23661 SMR:O23661 IntAct:O23661 STRING:O23661
EnsemblPlants:AT2G33860.1 GeneID:817956 KEGG:ath:AT2G33860
GeneFarm:3366 TAIR:At2g33860 eggNOG:NOG315820 InParanoid:O23661
OMA:HESNNES PhylomeDB:O23661 ProtClustDB:CLSN2913114
Genevestigator:O23661 GermOnline:AT2G33860 GO:GO:0010158
Uniprot:O23661
Length = 608
Score = 514 (186.0 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 105/208 (50%), Positives = 134/208 (64%)
Query: 17 CLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSC-RRIPPYILCRVSPIK 75
CL+ LWHACAG ++ +P S V YFPQGH E A P DF + +PP++ CR+ +K
Sbjct: 52 CLE--LWHACAGPLISLPKRGSLVLYFPQGHLEQA--P-DFSAAIYGLPPHVFCRILDVK 106
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQ-------DKPASFAKTLTQ 128
A+ TDEVYA++ L+P S D + +GI + E + P F KTLT
Sbjct: 107 LHAETTTDEVYAQVSLLPES-EDIERKVREGIIDVDGGEEDYEVLKRSNTPHMFCKTLTA 165
Query: 129 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 188
SD + GGFSVPR AE FP LDYS P Q +LA+D+HG W+FRHIYRG PRRHLLT
Sbjct: 166 SDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRRHLLT 225
Query: 189 TGWSTFVNHKKLVAGDSIVFLRAENGDL 216
TGWS FVN KKLV+GD+++FLR ++G L
Sbjct: 226 TGWSAFVNKKKLVSGDAVLFLRGDDGKL 253
Score = 205 (77.2 bits), Expect = 4.2e-69, Sum P(2) = 4.2e-69
Identities = 66/216 (30%), Positives = 93/216 (43%)
Query: 233 VTSGWNG--NCVTPYGGFSA-FLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GW+ N G + FLR DD KL R + +
Sbjct: 224 LTTGWSAFVNKKKLVSGDAVLFLRGDDGKL-RLGVRRASQIEGTAALSAQYNQNMNHNNF 282
Query: 290 IEAATLAANRQPFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSS-RI 348
E A + F + Y P+AS F + A + +C GMRFK E+ED+S R
Sbjct: 283 SEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDASERR 342
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQN--VKRVSPWLVELVSNMPTIHL 406
S G IS + DP+ WP S WR L V WD D++ N +RVSPW +E ++
Sbjct: 343 S--PGIISGISDLDPIRWPGSKWRCLLVRWD--DIVANGHQQRVSPWEIEPSGSISNSGS 398
Query: 407 SPFSPPRKKSRL---PQPPDFPLDGQLPMPSFSGSL 439
+ P K+SR+ PD P+ + F SL
Sbjct: 399 FVTTGP-KRSRIGFSSGKPDIPVSEGIRATDFEESL 433
>TAIR|locus:2175098 [details] [associations]
symbol:ARF4 "auxin response factor 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;ISS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0010158 "abaxial
cell fate specification" evidence=IGI] [GO:0010050 "vegetative
phase change" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AB011483 GO:GO:0010050
HOGENOM:HOG000241141 GO:GO:0010158 EMBL:AF013466 EMBL:AF344313
EMBL:AY080832 EMBL:AY113977 IPI:IPI00525857 RefSeq:NP_200853.1
UniGene:At.6797 ProteinModelPortal:Q9ZTX9 SMR:Q9ZTX9 IntAct:Q9ZTX9
STRING:Q9ZTX9 PaxDb:Q9ZTX9 PRIDE:Q9ZTX9 EnsemblPlants:AT5G60450.1
GeneID:836166 KEGG:ath:AT5G60450 GeneFarm:3367 TAIR:At5g60450
eggNOG:NOG277773 InParanoid:Q9ZTX9 OMA:RILYTDS PhylomeDB:Q9ZTX9
ProtClustDB:CLSN2686689 Genevestigator:Q9ZTX9 GermOnline:AT5G60450
Uniprot:Q9ZTX9
Length = 788
Score = 465 (168.7 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 99/211 (46%), Positives = 129/211 (61%)
Query: 20 SQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIP-----PYILCRVSPI 74
S+LWHACAG + +P + V YFPQGH E V + S IP P I+CRV +
Sbjct: 64 SELWHACAGPLTCLPKKGNVVVYFPQGHLEQDA-MVSYSSPLEIPKFDLNPQIVCRVVNV 122
Query: 75 KFMADPETDEVYAKIKLVPVSTNDPDFDNDDG-----IAGIH----SNETQDKPASFAKT 125
+ +A+ +TDEVY ++ L+P+ + N +G + G S+ + P F KT
Sbjct: 123 QLLANKDTDEVYTQVTLLPLQ--EFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKT 180
Query: 126 LTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRH 185
LT SD + GGFSVPR AE F LDY P Q ++AKD+HG WKFRHIYRG PRRH
Sbjct: 181 LTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRH 240
Query: 186 LLTTGWSTFVNHKKLVAGDSIVFLRAENGDL 216
LLTTGWS FV+ K LV+GD+++FLR E G+L
Sbjct: 241 LLTTGWSIFVSQKNLVSGDAVLFLRDEGGEL 271
Score = 198 (74.8 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 57/189 (30%), Positives = 88/189 (46%)
Query: 233 VTSGWN-----GNCVTPYGGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPE 287
+T+GW+ N V+ G FLR++ +L R ++ K
Sbjct: 242 LTTGWSIFVSQKNLVS--GDAVLFLRDEGGEL-RLGIRRAARPRNGLPDSIIEKNSC--S 296
Query: 288 SVIE-AATLAANRQPFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSS 346
+++ A + + F V Y PRA+ EF + +++ C G RF+M FE +DS
Sbjct: 297 NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSP 356
Query: 347 RISWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHL 406
G ++ V DP WP+S WR L V WDE + + +RVSPW ++ ++P HL
Sbjct: 357 ERRC-AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLP--HL 413
Query: 407 SPFSPPRKK 415
S S PR K
Sbjct: 414 SIQSSPRPK 422
Score = 106 (42.4 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 25/84 (29%), Positives = 41/84 (48%)
Query: 621 KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIE----NAETLSHLLYRDVTGAVKHIG 676
KV + VGR +DLS L YD+L +L +F +E + E +LY D + +G
Sbjct: 669 KVHKQGSQVGRAIDLSRLNGYDDLLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVG 728
Query: 677 DEPFSDFMKTARRLTILMDSGSDN 700
D+P+ DF ++ + +N
Sbjct: 729 DDPWHDFCNVVWKIHLYTKEEVEN 752
Score = 43 (20.2 bits), Expect = 5.8e-50, Sum P(3) = 5.8e-50
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 491 RAAKPTRASNSPILQKPSMSENISCLLTMSHSTQ 524
RAA+P I++K S S NI L+ + ST+
Sbjct: 277 RAARPRNGLPDSIIEKNSCS-NILSLVANAVSTK 309
Score = 39 (18.8 bits), Expect = 4.3e-67, Sum P(4) = 4.3e-67
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 426 LDGQLPMPSFS-GSLLGPNSPFGCLPDNTPAG 456
+D + +P S S P P+ L D TP G
Sbjct: 404 IDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPG 435
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 470 (170.5 bits), Expect = 5.3e-67, Sum P(3) = 5.3e-67
Identities = 98/215 (45%), Positives = 134/215 (62%)
Query: 9 EKLKEVEKCLDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHACGPVDFRSCRRIPPY-- 66
E+ + E L +LWHACAG +V +P + RVFYFPQGH E + + +++P Y
Sbjct: 49 ERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDL 108
Query: 67 ---ILCRVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPASFA 123
+LCRV + A+ +TDEVYA+I L+P + D + + A + + + SF
Sbjct: 109 PSKLLCRVINVDLKAEADTDEVYAQITLLPEANQDENAIEKE--APLPP-PPRFQVHSFC 165
Query: 124 KTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPR 183
KTLT SD + GGFSV R A+ P LD S PP Q ++AKD+H W+FRHI+RG PR
Sbjct: 166 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPR 225
Query: 184 RHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCV 218
RHLL +GWS FV+ K+LVAGD+ +FLR ENG+L V
Sbjct: 226 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRV 260
Score = 220 (82.5 bits), Expect = 5.3e-67, Sum P(3) = 5.3e-67
Identities = 50/124 (40%), Positives = 63/124 (50%)
Query: 302 FEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVS 361
F V Y PR S EF V +++ + GMRFKM FE E++ F GTI ++ S
Sbjct: 300 FTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE-QRFTGTIVGIEES 358
Query: 362 DPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFS-PPRKKSRL-P 419
DP WP S WR L+V WDE + RVSPW VE P + P P R +S + P
Sbjct: 359 DPTRWPKSKWRSLKVRWDETSSIPRPDRVSPWKVEPALAPPALSPVPMPRPKRPRSNIAP 418
Query: 420 QPPD 423
PD
Sbjct: 419 SSPD 422
Score = 89 (36.4 bits), Expect = 5.3e-67, Sum P(3) = 5.3e-67
Identities = 40/163 (24%), Positives = 72/163 (44%)
Query: 539 LFGKPILTEQQMSHSCSG--DTVSPVRTGNSSSEGNLDKLTNFSDGSGSAL--QQQGLPD 594
LFG P+ + S + ++ + + L++ S GS S ++QG P
Sbjct: 656 LFGIPLTNNMNGTDSTMSQRNNLNDAAGLTQIASPKVQDLSDQSKGSKSTNDHREQGRP- 714
Query: 595 RSFCEVFQWYKDNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGI 654
F KD + +T S KV + +GR++DLS +Y+EL +L +F
Sbjct: 715 --FQTNNPHPKDAQTKTNSSRSC--TKVHKQGIALGRSVDLSKFQNYEELVAELDRLFEF 770
Query: 655 ENAETLSH-----LLYRDVTGAVKHIGDEPFSDFMKTARRLTI 692
N E ++ ++Y D + +GD+P+ +F R++ I
Sbjct: 771 -NGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 812
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 460 (167.0 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 101/207 (48%), Positives = 123/207 (59%)
Query: 18 LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAEHAC-----GPVDFR-SCRRIPPYILCRV 71
L ++LW ACAG +V++P RVFYFPQGH E G VD +PP ILCRV
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 72 SPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPASFAKTLTQSDA 131
+ A+ ETDEVYA+I L P D + + T D SF K LT SD
Sbjct: 99 LSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE-PAKPTVD---SFVKILTASDT 154
Query: 132 NNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGW 191
+ GGFSV R A P LD + P Q ++A+D+HG W+F+HI+RG PRRHLLTTGW
Sbjct: 155 STHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPRRHLLTTGW 214
Query: 192 STFVNHKKLVAGDSIVFLRAENGDLCV 218
STFV K+LVAGD+ VFLR E GDL V
Sbjct: 215 STFVTSKRLVAGDAFVFLRGETGDLRV 241
Score = 190 (71.9 bits), Expect = 1.8e-61, Sum P(2) = 1.8e-61
Identities = 89/312 (28%), Positives = 136/312 (43%)
Query: 233 VTSGWNGNCVTPY----GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPES 288
+T+GW+ VT G FLR + L R +++ +R
Sbjct: 210 LTTGWS-TFVTSKRLVAGDAFVFLRGETGDL-RVGVRRLAKQQSTMPASVISSQSMRL-G 266
Query: 289 VIEAATLAANRQPFEVVYY-PRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDS-S 346
V+ A+ A VV+Y PR S +F + + A++ + GMR++M FE E+S
Sbjct: 267 VLATASHAVTTTTIFVVFYKPRIS--QFIISVNKYMMAMKNGFSLGMRYRMRFEGEESPE 324
Query: 347 RISWFMGTI-SSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIH 405
RI F GTI S +S WP S WR LQ+ WDEP +Q +VSPW +E S P+
Sbjct: 325 RI--FTGTIIGSGDLSSQ--WPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFS--PSA- 377
Query: 406 LSPFSPPRKKSRLPQP-PDFPLDGQLPMPSF--SGSLLGPNSPFGCLPDNTPAGMQGARH 462
L+P +P +++S+ + P + G SF S S ++P L PA R+
Sbjct: 378 LTP-TPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHESNPSVKLLFQDPAT---ERN 433
Query: 463 AHYGLSLSDLHLNKLQSGL-SPAGFPPFDRAAKPTRASNSPILQKPSMSENISCLLTMSH 521
++ + S L ++ + S FD +KP A+ Q S+ NIS T
Sbjct: 434 SNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQ 493
Query: 522 STQPSKKADDLK 533
S + K
Sbjct: 494 DPNSSNSPKEQK 505
Score = 142 (55.0 bits), Expect = 2.0e-56, Sum P(2) = 2.0e-56
Identities = 79/284 (27%), Positives = 124/284 (43%)
Query: 431 PMPSFSGSLLGPNSPFGCLPDNTPAGMQGARHAHYGLSLSDLHLNKLQ----SGLSPAGF 486
P F+G+++G G L PA + + S NK+ SP+
Sbjct: 323 PERIFTGTIIGS----GDLSSQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSAL 378
Query: 487 -P-PFDRAAKPTRASN-SPILQKPSMSENISCLLTMSHSTQPSKKA--DDLKTPQ---LV 538
P P + +K R+ S I P S +S + SH + PS K D T +
Sbjct: 379 TPTPTQQQSKSKRSRPISEITGSPVASSFLSSF-SQSHESNPSVKLLFQDPATERNSNKS 437
Query: 539 LFGKPI---LTEQQMSHSCS--G-DTVSPVRTGNSSSEGNLDKL-TNFSDGSGSALQQQG 591
+F + +TE ++ SC G D S + + L + +N SD S + Q
Sbjct: 438 VFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISD-STTKCQD-- 494
Query: 592 LPDRSFCEVFQWYKDNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEM 651
P+ S K+ +Q+T KV M+ VGR +DL+LL SYDEL K+L +M
Sbjct: 495 -PNSSNSP-----KEQKQQTSTR---SRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKM 545
Query: 652 FGIENAETLSH---LLYRDVTGAVKHIGDEPFSDFMKTARRLTI 692
F IE + +++ D G +GD+P+++F K A++L I
Sbjct: 546 FEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFI 589
>TAIR|locus:2026145 [details] [associations]
symbol:ARF12 "auxin response factor 12" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 EMBL:AY669792 EMBL:AC007454
IPI:IPI00544760 PIR:C86467 RefSeq:NP_174691.2 UniGene:At.51185
ProteinModelPortal:Q9XID4 SMR:Q9XID4 IntAct:Q9XID4
EnsemblPlants:AT1G34310.1 GeneID:840331 KEGG:ath:AT1G34310
GeneFarm:3390 TAIR:At1g34310 eggNOG:NOG264447 PhylomeDB:Q9XID4
ProtClustDB:CLSN2681760 ArrayExpress:Q9XID4 Genevestigator:Q9XID4
GermOnline:AT1G34310 Uniprot:Q9XID4
Length = 593
Score = 395 (144.1 bits), Expect = 9.3e-54, Sum P(3) = 9.3e-54
Identities = 89/205 (43%), Positives = 113/205 (55%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRRI---PPYILCRVSPIK 75
QLW CAG + +P + +V+YFPQGH E + + I P + CRV I
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCRVIAIH 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE YA+I L+P +T + NE Q +P SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQ---------VVIPTQNENQFRPLVNSFTKVLTASDTSA 137
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
GGF VP+ A P LD S P Q +LA D+HG W+F H YRGTP+RHLLTTGW+
Sbjct: 138 HGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNA 197
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F KKLVAGD IVF+R E G+L V
Sbjct: 198 FTTSKKLVAGDVIVFVRGETGELRV 222
Score = 161 (61.7 bits), Expect = 9.3e-54, Sum P(3) = 9.3e-54
Identities = 59/189 (31%), Positives = 83/189 (43%)
Query: 233 VTSGWNGNCVTPY---GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GWN + G F+R + +L R +++ +R V
Sbjct: 191 LTTGWNAFTTSKKLVAGDVIVFVRGETGEL-RVGIRRARHQQGNIPSSIVSIDCMRHGVV 249
Query: 290 IEAATLAANRQPFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRIS 349
A N+ F VVY PR+S +F V A+ ++ G RF M E +D S
Sbjct: 250 ASAKHAFDNQCMFTVVYKPRSS--KFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSERR 307
Query: 350 WFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPF 409
F GTI V P +W S WR L+V WDE K+VSPW +E + MP I++ P
Sbjct: 308 CF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEHL--MPAINV-PR 362
Query: 410 SPPRKKSRL 418
S K RL
Sbjct: 363 SFLLKNKRL 371
Score = 96 (38.9 bits), Expect = 9.3e-54, Sum P(3) = 9.3e-54
Identities = 22/75 (29%), Positives = 42/75 (56%)
Query: 621 KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA-ETLSH--LLYRDVTGAVKHIGD 677
KV M+ +GR +DLS+L YD+L +L ++F I+ +T + + + D +GD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWEIAFTDSDEDKMLVGD 574
Query: 678 EPFSDFMKTARRLTI 692
+P+ +F +++ I
Sbjct: 575 DPWPEFCNMVKKIFI 589
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 379 (138.5 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 87/205 (42%), Positives = 114/205 (55%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRRI---PPYILCRVSPIK 75
QLW CAG + +P + V+YFPQG+ E A + + I P + CRV I
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE+YA+I L+P +T + +E + +P SF K LT SD +
Sbjct: 87 LKVENNSDEIYAEITLMPDTTQ---------VVIPTQSENRFRPLVNSFTKVLTASDTSA 137
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
GGFSVP+ A P LD S P Q ILA D+H W+FRH YRGTP+RH LTTGW+
Sbjct: 138 YGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNE 197
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F+ KKLV GD IVF+R E G+L V
Sbjct: 198 FITSKKLVKGDVIVFVRGETGELRV 222
Score = 165 (63.1 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 60/196 (30%), Positives = 90/196 (45%)
Query: 233 VTSGWNGNCVTPY---GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GWN + G F+R + +L R +++ +R V
Sbjct: 191 LTTGWNEFITSKKLVKGDVIVFVRGETGEL-RVGIRRARHQQGNIPSSIVSIDCMR-HGV 248
Query: 290 IEAATLAANRQP-FEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRI 348
I +A A + Q F VVY PR+S +F V A+ ++ G RF M FE +D S
Sbjct: 249 IASAKHAFDNQCIFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSER 306
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSP 408
+F GTI V P +W S WR L+V WDE +VSPW +E + +P +++ P
Sbjct: 307 RYF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--VPALNV-P 361
Query: 409 FSPPRKKSRLPQPPDF 424
S K RL + +F
Sbjct: 362 RSSLLKNKRLREVNEF 377
Score = 110 (43.8 bits), Expect = 3.7e-53, Sum P(3) = 3.7e-53
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 621 KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA-ETLSH--LLYRDVTGAVKHIGD 677
KV M+ +GR +DLS+L YD+L +L ++F I+ +T + + + D G +GD
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQWKIAFTDSDGYEMLVGD 574
Query: 678 EPFSDFMKTARRLTI 692
+P+ +F K +++ I
Sbjct: 575 DPWPEFCKMVKKILI 589
>TAIR|locus:2036288 [details] [associations]
symbol:ARF22 "auxin response factor 22" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 ProtClustDB:CLSN2681760
EMBL:AC023913 EMBL:AY669796 IPI:IPI00545778 PIR:C86468
RefSeq:NP_174699.2 UniGene:At.51186 ProteinModelPortal:Q9C8N7
SMR:Q9C8N7 IntAct:Q9C8N7 EnsemblPlants:AT1G34390.1 GeneID:840341
KEGG:ath:AT1G34390 GeneFarm:3426 TAIR:At1g34390 OMA:NITTNAN
PhylomeDB:Q9C8N7 Genevestigator:Q9C8N7 Uniprot:Q9C8N7
Length = 598
Score = 388 (141.6 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 88/205 (42%), Positives = 115/205 (56%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRRI---PPYILCRVSPIK 75
QLW CAG + +P + +++YFPQG+ E A + + I P + CRV I+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCRVIAIQ 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE YA+I L+P +T + NE Q +P SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQ---------VVIPTQNENQFRPLVNSFTKVLTASDTS- 136
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
GGF VP+ A P LD S P Q +LA D+HG W+F H YRGTP+RHLLTTGW+
Sbjct: 137 -GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNA 195
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F KKLVAGD IVF+R E G+L V
Sbjct: 196 FTTSKKLVAGDVIVFVRGETGELRV 220
Score = 164 (62.8 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 59/190 (31%), Positives = 86/190 (45%)
Query: 233 VTSGWNGNCVTPY---GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GWN + G F+R + +L R +++ +R V
Sbjct: 189 LTTGWNAFTTSKKLVAGDVIVFVRGETGEL-RVGIRRAGHQQGNIPSSIISIESMR-HGV 246
Query: 290 IEAATLAANRQ-PFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRI 348
I +A A + Q F VVY PR+S +F V A+ ++ G RF M FE +D S
Sbjct: 247 IASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSER 304
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSP 408
+F GTI V P +W S WR L+V WDE +VSPW +E + MP +++ P
Sbjct: 305 RYF-GTIIGVSDFSP-HWKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHL--MPALNV-P 359
Query: 409 FSPPRKKSRL 418
K RL
Sbjct: 360 RPSLLKNKRL 369
Score = 96 (38.9 bits), Expect = 6.0e-53, Sum P(3) = 6.0e-53
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 617 TGHC-KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA-ETLSH--LLYRDVTGAV 672
T C KV M+ + R +DLS+L YD+L +L E+F ++ +T + + + D
Sbjct: 508 TRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFDLKGQLQTRNQWEIAFTDSDDDK 567
Query: 673 KHIGDEPFSDFMKTARRLTILMDSG 697
+GD+P+ +F +++ I G
Sbjct: 568 MLVGDDPWPEFCNMVKKILIFKRGG 592
>TAIR|locus:2014731 [details] [associations]
symbol:ARF14 "auxin response factor 14" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC007887 IPI:IPI00548517 PIR:G86476
RefSeq:NP_174786.1 UniGene:At.39556 ProteinModelPortal:Q9LQE8
SMR:Q9LQE8 IntAct:Q9LQE8 PRIDE:Q9LQE8 EnsemblPlants:AT1G35540.1
GeneID:840450 KEGG:ath:AT1G35540 GeneFarm:3394 TAIR:At1g35540
OMA:DITEDAM PhylomeDB:Q9LQE8 Genevestigator:Q9LQE8 Uniprot:Q9LQE8
Length = 605
Score = 397 (144.8 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 90/205 (43%), Positives = 115/205 (56%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRRI---PPYILCRVSPIK 75
QLW CAG + +P + +V+YFPQGH E A + + I P + CRV I+
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCRVIAIQ 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE YA+I L+P +T + N+ Q +P SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQ---------VVIPTQNQNQFRPLVNSFTKVLTASDTSV 137
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
GGFSVP+ A P LD S P Q ILA D+HG W+FRHIYRGT +RHLLT GW+
Sbjct: 138 HGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNA 197
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F KKLV GD IVF+R E G+L V
Sbjct: 198 FTTSKKLVEGDVIVFVRGETGELRV 222
Score = 152 (58.6 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 56/189 (29%), Positives = 82/189 (43%)
Query: 233 VTSGWNGNCVTPY---GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T GWN + G F+R + +L R +++ +R +
Sbjct: 191 LTIGWNAFTTSKKLVEGDVIVFVRGETGEL-RVGIRRAGHQQGNIPSSIVSIESMR-HGI 248
Query: 290 IEAATLAANRQ-PFEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRI 348
I +A A + Q F VVY PR+S +F V + ++ G RF M FE +D S
Sbjct: 249 IASAKHAFDNQCMFIVVYKPRSS--QFIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSER 306
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSP 408
F GTI V P +W S WR L+V WDE +VSPW +E ++ + S
Sbjct: 307 RSF-GTIIGVSDFSP-HWKCSEWRSLEVQWDEFASFPRPNQVSPWDIEHLTPWSNVSRSS 364
Query: 409 FSPPRKKSR 417
F K+SR
Sbjct: 365 FLK-NKRSR 372
Score = 89 (36.4 bits), Expect = 3.9e-52, Sum P(3) = 3.9e-52
Identities = 39/177 (22%), Positives = 79/177 (44%)
Query: 530 DDLKTPQLVLFGKPILTEQQMSHSCSGDTVSPVRTGNSSSEGNLDKLTNFSDGSGSAL-- 587
+D TP +L P+ Q M+ + V+P+ +++ +L S + S +
Sbjct: 415 EDAMTPSRLLMSYPV---QPMAKLNYNNVVTPIEENITTNAVASFRLFGVSLATPSVIKD 471
Query: 588 --QQQGLPDRSFCEVFQWYKDN--RQETEPSLE----TGHC-KVFMESEDVGRTLDLSLL 638
+Q GL + ++ + R TE + T C KV M+ +GR +DLS+L
Sbjct: 472 PVEQIGLEISRLTQEKKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVL 531
Query: 639 GSYDELYKKLAEMFGIEN---AETLSHLLYRDVTGAVKHIGDEPFSDFMKTARRLTI 692
YD+L +L ++F ++ A + + + +G++P+ +F +++ I
Sbjct: 532 NGYDQLILELEKLFDLKGQLQARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFI 588
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 363 (132.8 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 86/205 (41%), Positives = 111/205 (54%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRRI---PPYILCRVSPIK 75
QLW CAG + +P + V+YFPQG+ E A + + I P + CRV I
Sbjct: 27 QLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCRVIAIH 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE YA+I L+P +T + +E Q +P SF K LT SD +
Sbjct: 87 LKVENNSDETYAEITLMPDTTQ---------VVIPTQSENQFRPLVNSFTKVLTASDTSA 137
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
GGF VP+ A P L P Q +LAKD+HG W+FRH YRGTP+RH LTTGW+
Sbjct: 138 YGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNE 193
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F KKLV GD IVF+R E G+L V
Sbjct: 194 FTTSKKLVKGDVIVFVRGETGELRV 218
Score = 170 (64.9 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 62/207 (29%), Positives = 93/207 (44%)
Query: 233 VTSGWNGNCVTPY---GGFSAFLREDDNKLMRXXXXXXXXXXXXXXXXLMAKGKVRPESV 289
+T+GWN + G F+R + +L R +++ +R V
Sbjct: 187 LTTGWNEFTTSKKLVKGDVIVFVRGETGEL-RVGIRRARHQQGNIPSSIVSIDCMR-HGV 244
Query: 290 IEAATLAANRQP-FEVVYYPRASTPEFCVKASMVKAALQIRWCSGMRFKMAFETEDSSRI 348
I +A A + Q F VVY P + +F V A+ ++ G RF M FE +D S
Sbjct: 245 IASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSER 304
Query: 349 SWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPTIHLSP 408
+F GTI V P +W S WR L+V WDE +VSPW +E + M +++ P
Sbjct: 305 RYF-GTIIGVNDFSP-HWKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHL--MSALNV-P 359
Query: 409 FSPPRKKSRLPQPPDFPLD-GQLPMPS 434
S K RL + +F + GQL + S
Sbjct: 360 RSSLLKNKRLREVNEFGQEIGQLSVAS 386
Score = 109 (43.4 bits), Expect = 1.1e-51, Sum P(3) = 1.1e-51
Identities = 25/80 (31%), Positives = 46/80 (57%)
Query: 617 TGHC-KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA-ETLSH--LLYRDVTGAV 672
T C KV M+ +GR +DLS+L YD+L +L ++F ++ +T + + + D G
Sbjct: 494 TRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQWKIAFTDSDGYE 553
Query: 673 KHIGDEPFSDFMKTARRLTI 692
+GD+P+ +F K +++ I
Sbjct: 554 MLVGDDPWPEFCKMVKKILI 573
>TAIR|locus:2008991 [details] [associations]
symbol:ARF13 "AUXIN RESPONSE FACTOR 13" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006863 "purine nucleobase transport" evidence=RCA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GO:GO:0005634 GO:GO:0009734 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 IPI:IPI00938986 RefSeq:NP_001154393.1
UniGene:At.51184 ProteinModelPortal:F4HT52 SMR:F4HT52 PRIDE:F4HT52
EnsemblPlants:AT1G34170.3 GeneID:840316 KEGG:ath:AT1G34170
OMA:PEFCNMA ArrayExpress:F4HT52 Uniprot:F4HT52
Length = 546
Score = 358 (131.1 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 85/225 (37%), Positives = 123/225 (54%)
Query: 5 MDSKEKLK-EVEKC-LDSQLWHACAGGMVQMPPVNSRVFYFPQGHAE----HACGPVD-F 57
M+++ +L ++ K + +LW+ CAG + +P +V+YFPQGH E +D
Sbjct: 7 MNAQPELSVDITKTYMYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHI 66
Query: 58 RSCRRIPPYILCRVSPIKFMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQD 117
R +P + CRV I D TDEVYA+I L+P +T H N T D
Sbjct: 67 RPIFDLPSKLRCRVVAIDRKVDKNTDEVYAQISLMPDTTE----------VMTH-NTTMD 115
Query: 118 --KPAS--FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWK 173
+P F+K LT SD + GG +P+ A FP LD S Q ++AKD++G+ W
Sbjct: 116 TRRPIVYFFSKILTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWS 175
Query: 174 FRHIYRGTPRRHLLTTG--WSTFVNHKKLVAGDSIVFLRAENGDL 216
F+H++RGTP+RH+ T+G WS F K+L+ GD V LR ENG+L
Sbjct: 176 FKHVFRGTPQRHMFTSGGGWSVFATTKRLIVGDIFVLLRGENGEL 220
Score = 117 (46.2 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 30/79 (37%), Positives = 42/79 (53%)
Query: 337 KMAFETEDSSRISWFMGTISSVQVSDPLYWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVE 396
+M FE +D S + GTI V P +W DS WR L+V WDE +VSPW +E
Sbjct: 269 RMQFEGKDFSE-KRYDGTIIGVNDMSP-HWKDSEWRSLKVQWDELSPFLRPNQVSPWDIE 326
Query: 397 LVSNMPTIHLSPFSPPRKK 415
+ +P+ +S S +KK
Sbjct: 327 HL--IPSSDISQSSLKKKK 343
Score = 102 (41.0 bits), Expect = 1.8e-45, Sum P(3) = 1.8e-45
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 621 KVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENA-ETLSH--LLYRDVTGAVKHIGD 677
KV M+ + R +DL+ + Y++L +KL E+F +++ T + +++ + GA +GD
Sbjct: 437 KVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQWEIVFTNNEGAEMLVGD 496
Query: 678 EPFSDFMKTARRLTI 692
+P+ +F A+R+ I
Sbjct: 497 DPWPEFCNMAKRIFI 511
Score = 39 (18.8 bits), Expect = 2.4e-37, Sum P(3) = 2.4e-37
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 557 DTVSPVRTGNSSSEGNLDKLTNFSDGSGSALQQQ 590
D +SP N S +++ L SD S S+L+++
Sbjct: 309 DELSPFLRPNQVSPWDIEHLIPSSDISQSSLKKK 342
>TAIR|locus:2037169 [details] [associations]
symbol:ARF23 "auxin response factor 23" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0009734 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
HOGENOM:HOG000241141 EMBL:AC022314 IPI:IPI00526589 PIR:E96503
RefSeq:NP_175062.1 UniGene:At.52022 ProteinModelPortal:Q9LP07
SMR:Q9LP07 EnsemblPlants:AT1G43950.1 GeneID:840994
KEGG:ath:AT1G43950 GeneFarm:3427 TAIR:At1g43950 OMA:PTENENQ
PhylomeDB:Q9LP07 Genevestigator:Q9LP07 GermOnline:AT1G43950
Uniprot:Q9LP07
Length = 222
Score = 329 (120.9 bits), Expect = 6.9e-29, P = 6.9e-29
Identities = 81/205 (39%), Positives = 105/205 (51%)
Query: 21 QLWHACAGGMVQMPPVNSRVFYFPQGHAE--HACGPVDFRSCRR---IPPYILCRVSPIK 75
QLW CAG + +P + +V+YFPQGH E A + + +P + CRV I
Sbjct: 27 QLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVIAIH 86
Query: 76 FMADPETDEVYAKIKLVPVSTNDPDFDNDDGIAGIHSNETQDKPA--SFAKTLTQSDANN 133
+ +DE Y +I L+P +T + NE Q +P SF K LT SD +
Sbjct: 87 LKVENNSDETYVEITLMPDTTQ---------VVIPTENENQFRPIVNSFTKVLTASDTSA 137
Query: 134 GGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWST 193
G FSVP A P LD S P Q ++A D+HG W+F+H YR PR TTGW+
Sbjct: 138 QGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPRGD--TTGWNA 194
Query: 194 FVNHKKLVAGDSIVFLRAENGDLCV 218
F KKLV GD IVF R E G+L V
Sbjct: 195 FTTSKKLVVGDVIVFARGETGELRV 219
>TAIR|locus:2039165 [details] [associations]
symbol:ABS2 "ABNORMAL SHOOT 2" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0080167 "response to karrikin" evidence=IEP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0080167 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC007017 EMBL:AC007135
HSSP:Q9ZWM9 HOGENOM:HOG000239355 EMBL:AK117587 EMBL:AJ441075
IPI:IPI00522172 IPI:IPI00531123 PIR:F84776 RefSeq:NP_181152.2
RefSeq:NP_850260.1 UniGene:At.23308 ProteinModelPortal:Q8GYJ2
SMR:Q8GYJ2 PaxDb:Q8GYJ2 EnsemblPlants:AT2G36080.1 GeneID:818181
KEGG:ath:AT2G36080 TAIR:At2g36080 eggNOG:NOG253490
InParanoid:Q8GYJ2 OMA:AQAVESQ PhylomeDB:Q8GYJ2
ProtClustDB:CLSN2680069 Genevestigator:Q8GYJ2 Uniprot:Q8GYJ2
Length = 244
Score = 164 (62.8 bits), Expect = 8.8e-10, P = 8.8e-10
Identities = 37/103 (35%), Positives = 56/103 (54%)
Query: 111 HSNET-QDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILA--KDV 167
H N+ ++K A F K LT SD +P+ AE FP +AD + +L +D
Sbjct: 26 HQNDVVEEKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDE 85
Query: 168 HGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLR 210
G+ W+FR+ Y + + ++LT GWS +V K L AGD ++F R
Sbjct: 86 EGKPWRFRYSYWNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHR 128
>TAIR|locus:2041404 [details] [associations]
symbol:NGA1 "NGATHA1" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC004411
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
GO:GO:0009908 GO:GO:0048366 EMBL:AC005310 HSSP:Q9ZWM9 EMBL:AK118045
EMBL:BT008534 IPI:IPI00537675 PIR:T02200 RefSeq:NP_566089.1
UniGene:At.36441 ProteinModelPortal:O82799 SMR:O82799 IntAct:O82799
STRING:O82799 EnsemblPlants:AT2G46870.1 GeneID:819300
KEGG:ath:AT2G46870 TAIR:At2g46870 eggNOG:NOG237610
HOGENOM:HOG000239355 InParanoid:O82799 OMA:MECGESG PhylomeDB:O82799
ProtClustDB:CLSN2682823 Genevestigator:O82799 Uniprot:O82799
Length = 310
Score = 166 (63.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 41/121 (33%), Positives = 63/121 (52%)
Query: 96 TNDPDFDNDDGIAGIH-SNETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYS 154
T D D + +A + E D+ F K +T SD +P+ AE FP LD S
Sbjct: 8 TRDEDEEEAKPLAEEEGAREVADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSS 66
Query: 155 ADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENG 214
++ + +D+ G++W+FR+ Y + + +++T GWS FV KKL AGD + F R G
Sbjct: 67 SNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCV-G 125
Query: 215 D 215
D
Sbjct: 126 D 126
>TAIR|locus:2085969 [details] [associations]
symbol:EDF3 "ethylene response DNA binding factor 3"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009691 "cytokinin biosynthetic
process" evidence=RCA] InterPro:IPR001471 InterPro:IPR003340
InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863
PROSITE:PS51032 SMART:SM00380 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009873 EMBL:AB028607
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 Gene3D:3.30.730.10
SUPFAM:SSF54171 HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484
KO:K09287 ProtClustDB:CLSN2682511 EMBL:AJ441073 EMBL:AK229415
EMBL:AY087951 IPI:IPI00523797 RefSeq:NP_189201.1 UniGene:At.37331
ProteinModelPortal:Q9LS06 SMR:Q9LS06 EnsemblPlants:AT3G25730.1
GeneID:822164 KEGG:ath:AT3G25730 TAIR:At3g25730 InParanoid:Q9LS06
OMA:NAHSKSE Genevestigator:Q9LS06 Uniprot:Q9LS06
Length = 333
Score = 161 (61.7 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 36/96 (37%), Positives = 56/96 (58%)
Query: 122 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILA--KDVHGETWKFRHIYR 179
F KT+T SD +P++ AE FP + + V+ +L +DV+G+ W+FR+ Y
Sbjct: 183 FEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYW 242
Query: 180 GTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGD 215
+ + ++LT GWS FV K+L AGD I F R+ + D
Sbjct: 243 NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQD 278
>TAIR|locus:2205319 [details] [associations]
symbol:RAV1 "related to ABI3/VP1 1" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=IEP] [GO:0009910 "negative
regulation of flower development" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0048527 "lateral root development"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001471 InterPro:IPR003340 InterPro:IPR016177
Pfam:PF00847 Pfam:PF02362 PROSITE:PS50863 PROSITE:PS51032
SMART:SM00380 SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0045892 EMBL:AC011810 GO:GO:0009873
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048527
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0009910 GO:GO:0048366
GO:GO:0009741 EMBL:AB013886 EMBL:AY063855 EMBL:AY091291
IPI:IPI00544013 PIR:T51329 RefSeq:NP_172784.1 UniGene:At.20558
PDB:1WID PDBsum:1WID ProteinModelPortal:Q9ZWM9 SMR:Q9ZWM9
STRING:Q9ZWM9 EnsemblPlants:AT1G13260.1 GeneID:837886
KEGG:ath:AT1G13260 TAIR:At1g13260 eggNOG:NOG266118
HOGENOM:HOG000237484 InParanoid:Q9ZWM9 KO:K09287 OMA:ICETPAI
PhylomeDB:Q9ZWM9 ProtClustDB:CLSN2682511 EvolutionaryTrace:Q9ZWM9
Genevestigator:Q9ZWM9 GermOnline:AT1G13260 Uniprot:Q9ZWM9
Length = 344
Score = 161 (61.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 38/109 (34%), Positives = 60/109 (55%)
Query: 109 GIHSNETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILA--KD 166
G+ + + A F K +T SD +P++ AE FP L S++ V+ +L +D
Sbjct: 175 GVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFP-LP-SSNVSVKGVLLNFED 232
Query: 167 VHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGD 215
V+G+ W+FR+ Y + + ++LT GWS FV K L AGD + F R+ D
Sbjct: 233 VNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQD 281
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 48/154 (31%), Positives = 74/154 (48%)
Query: 549 QMSHSCSGDTVSPV-RTGNSSSEGNLD---KLTNFSDGSGSALQQQGLPDRS-FCEVFQW 603
++S+SCS + S V T S SE +++ LT S +Q P +S + +
Sbjct: 2 EVSNSCSSFSSSSVDSTKPSPSESSVNLSLSLTFPSTSPQREARQDWPPIKSRLRDTLKG 61
Query: 604 YKDNRQETEPSLETGHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIE----NAET 659
+ R+ + SL KV+ME +GR LDL + Y+ L + L+ MF N +
Sbjct: 62 RRLLRRGDDTSL---FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRDR 118
Query: 660 LSHLL-YRDVTGAVKHIGDEPFSDFMKTARRLTI 692
H+L Y D G +GD P+ F++T RRL I
Sbjct: 119 KHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKI 152
>TAIR|locus:2200950 [details] [associations]
symbol:NGA3 "NGATHA3" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
HSSP:Q9ZWM9 EMBL:AC007323 eggNOG:NOG237610 HOGENOM:HOG000239355
EMBL:BX814729 IPI:IPI00536920 PIR:B86141 RefSeq:NP_171611.1
UniGene:At.49492 ProteinModelPortal:Q9MAN1 SMR:Q9MAN1 STRING:Q9MAN1
PRIDE:Q9MAN1 EnsemblPlants:AT1G01030.1 GeneID:839321
KEGG:ath:AT1G01030 TAIR:At1g01030 InParanoid:Q9MAN1 OMA:RNIVGSE
PhylomeDB:Q9MAN1 ProtClustDB:CLSN2912766 Genevestigator:Q9MAN1
Uniprot:Q9MAN1
Length = 358
Score = 151 (58.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 34/94 (36%), Positives = 51/94 (54%)
Query: 117 DKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRH 176
+K F K +T SD +P+ AE FP LD S + + +D +G+ W+FR+
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWRFRY 109
Query: 177 IYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLR 210
Y + + +++T GWS FV KKL AGD + F R
Sbjct: 110 SYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQR 143
>TAIR|locus:2117007 [details] [associations]
symbol:NGA4 "NGATHA4" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AF096370 EMBL:AL161492 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:FJ873734 EMBL:BT029520 EMBL:AB493670 IPI:IPI00543194
PIR:T01944 RefSeq:NP_192059.4 UniGene:At.34418
ProteinModelPortal:O82595 SMR:O82595 STRING:O82595 PRIDE:O82595
EnsemblPlants:AT4G01500.1 GeneID:826750 KEGG:ath:AT4G01500
TAIR:At4g01500 eggNOG:NOG287578 InParanoid:O82595 OMA:YSSERRE
Genevestigator:O82595 Uniprot:O82595
Length = 333
Score = 153 (58.9 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 37/101 (36%), Positives = 57/101 (56%)
Query: 111 HSNETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILA-KDVHG 169
+S+E ++ F K LT SD +P+ AE FP L+ D T+L +D +G
Sbjct: 27 YSSERREH--MFDKVLTPSDVGKLNRLVIPKQHAENFFP-LE---DNQNGTVLDFQDKNG 80
Query: 170 ETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLR 210
+ W+FR+ Y + + +++T GWS FV KKL AGD++ F R
Sbjct: 81 KMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLFAGDTVSFYR 121
Score = 39 (18.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 386 NVKRVSPWLVELVSNMPTIHLSPFSPPR----KKSRL 418
N+ R P + + V P + P +PP+ KK RL
Sbjct: 227 NLGRSEPLVYDSVPVFPAGRVPPSAPPQPSTTKKLRL 263
>TAIR|locus:2012438 [details] [associations]
symbol:RAV2 "related to ABI3/VP1 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0015706 "nitrate transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 EMBL:AC011914 EMBL:AC011665
HSSP:Q9ZWM9 eggNOG:NOG266118 HOGENOM:HOG000237484 KO:K09287
ProtClustDB:CLSN2682511 EMBL:AB013887 EMBL:AF360312 EMBL:AY056361
EMBL:AY085908 EMBL:AF003101 IPI:IPI00548727 PIR:T51330
RefSeq:NP_001185352.1 RefSeq:NP_564947.1 UniGene:At.25344
ProteinModelPortal:P82280 SMR:P82280 DIP:DIP-59694N STRING:P82280
PaxDb:P82280 PRIDE:P82280 EnsemblPlants:AT1G68840.1
EnsemblPlants:AT1G68840.2 GeneID:843216 KEGG:ath:AT1G68840
TAIR:At1g68840 InParanoid:P82280 OMA:MDSSCID PhylomeDB:P82280
Genevestigator:P82280 Uniprot:P82280
Length = 352
Score = 146 (56.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 36/93 (38%), Positives = 52/93 (55%)
Query: 122 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPV-QTILA--KDVHGETWKFRHIY 178
F K +T SD +P+ AE FP L S P V + +L +DV+G+ W+FR+ Y
Sbjct: 188 FEKAVTPSDVGKLNRLVIPKQHAEKHFP-LP-SPSPAVTKGVLINFEDVNGKVWRFRYSY 245
Query: 179 RGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRA 211
+ + ++LT GWS FV K L AGD + F R+
Sbjct: 246 WNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>TAIR|locus:2079537 [details] [associations]
symbol:NGA2 "NGATHA2" species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009908
"flower development" evidence=IMP] [GO:0048366 "leaf development"
evidence=IMP] InterPro:IPR003340 Pfam:PF02362 PROSITE:PS50863
SMART:SM01019 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009908 GO:GO:0048366
EMBL:AL138642 HSSP:Q9ZWM9 HOGENOM:HOG000239355
ProtClustDB:CLSN2682823 EMBL:AK117646 EMBL:BT025866 EMBL:AY085197
IPI:IPI00523321 PIR:T47989 RefSeq:NP_191756.1 UniGene:At.34201
ProteinModelPortal:Q9M268 SMR:Q9M268 EnsemblPlants:AT3G61970.1
GeneID:825370 KEGG:ath:AT3G61970 TAIR:At3g61970 eggNOG:NOG273145
InParanoid:Q9M268 OMA:SSSMERE PhylomeDB:Q9M268
Genevestigator:Q9M268 Uniprot:Q9M268
Length = 299
Score = 143 (55.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 35/102 (34%), Positives = 54/102 (52%)
Query: 112 SNETQDKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSA--DPPVQTILA-KDVH 168
++ + ++ F K +T SD +P+ AE FP LD S D +L +D
Sbjct: 13 ASSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRS 71
Query: 169 GETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLR 210
G +W+FR+ Y + + +++T GWS FV KKL AGD + F R
Sbjct: 72 GNSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQR 113
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 556 GDTVSPVRTGNSSSEGNLDKLTNFSDGSGSALQ 588
G +V+ +SSS G++ + G+GS LQ
Sbjct: 228 GGSVNSTEEESSSSGGSIPRGRVSMVGAGSLLQ 260
>TAIR|locus:2031185 [details] [associations]
symbol:TEM1 "TEMPRANILLO 1" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0009873 "ethylene mediated signaling pathway" evidence=NAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001471
InterPro:IPR003340 InterPro:IPR016177 Pfam:PF00847 Pfam:PF02362
PROSITE:PS50863 PROSITE:PS51032 SMART:SM00380 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 EMBL:AC079281
GO:GO:0009873 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936
Gene3D:3.30.730.10 SUPFAM:SSF54171 GO:GO:0048573 HSSP:Q9ZWM9
HOGENOM:HOG000237484 KO:K09287 ProtClustDB:CLSN2682511
EMBL:AY091069 EMBL:AY122941 IPI:IPI00518546 PIR:A86386
RefSeq:NP_173927.1 UniGene:At.17318 ProteinModelPortal:Q9C6M5
SMR:Q9C6M5 DIP:DIP-59693N PaxDb:Q9C6M5 PRIDE:Q9C6M5
EnsemblPlants:AT1G25560.1 GeneID:839143 KEGG:ath:AT1G25560
TAIR:At1g25560 eggNOG:NOG250438 InParanoid:Q9C6M5 OMA:NDVAVEC
PhylomeDB:Q9C6M5 Genevestigator:Q9C6M5 Uniprot:Q9C6M5
Length = 361
Score = 139 (54.0 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 122 FAKTLTQSDANNGGGFSVPRYCAETIFP----RLDYSADP-PVQTILA--KDVHGETWKF 174
F KT+T SD +P+ AE FP +P P + +L +D G+ W+F
Sbjct: 195 FEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRF 254
Query: 175 RHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGD 215
R+ Y + + ++LT GWS FV K L AGD + F R+ D
Sbjct: 255 RYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPD 295
>TAIR|locus:2080782 [details] [associations]
symbol:AT3G11580 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009062
"fatty acid catabolic process" evidence=RCA] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC008153 HSSP:Q9ZWM9 HOGENOM:HOG000239355
EMBL:AJ441076 EMBL:AK175281 EMBL:BT029371 IPI:IPI00539345
IPI:IPI00547561 RefSeq:NP_187765.2 RefSeq:NP_850559.1
UniGene:At.39724 ProteinModelPortal:Q8RYD3 SMR:Q8RYD3
EnsemblPlants:AT3G11580.1 GeneID:820331 KEGG:ath:AT3G11580
TAIR:At3g11580 eggNOG:NOG285931 InParanoid:Q8RYD3 OMA:CHGDAVE
PhylomeDB:Q8RYD3 ProtClustDB:CLSN2918062 Genevestigator:Q8RYD3
Uniprot:Q8RYD3
Length = 267
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 39/118 (33%), Positives = 58/118 (49%)
Query: 111 HSNETQ--DKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY-----SADPPVQT-- 161
H N+ + + F K+LT SD +P+ AE FP + S D T
Sbjct: 16 HQNDVAIAQRESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNNNNNNGGSGDDVATTEK 75
Query: 162 --ILA-KDVHGETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDL 216
+L+ +D G+ WKFR+ Y + + ++LT GWS +V K L AGD +VF + DL
Sbjct: 76 GMLLSFEDESGKCWKFRYSYWNSSQSYVLTKGWSRYVKDKHLDAGD-VVFFQRHRFDL 132
>TAIR|locus:2164215 [details] [associations]
symbol:DPA4 "DEVELOPMENT-RELATED PcG TARGET IN THE APEX
4" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0009062 "fatty acid catabolic
process" evidence=RCA] [GO:0010073 "meristem maintenance"
evidence=IMP] [GO:0010358 "leaf shaping" evidence=IGI] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0048366 "leaf development" evidence=IGI] InterPro:IPR003340
Pfam:PF02362 PROSITE:PS50863 SMART:SM01019 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0045892 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010073 EMBL:AB006700 GO:GO:0010358
HSSP:Q9ZWM9 HOGENOM:HOG000239355 IPI:IPI00517655 IPI:IPI00891280
RefSeq:NP_001119177.1 RefSeq:NP_196243.2 UniGene:At.54745
ProteinModelPortal:Q9FNI3 SMR:Q9FNI3 EnsemblPlants:AT5G06250.2
GeneID:830512 KEGG:ath:AT5G06250 TAIR:At5g06250 eggNOG:NOG256843
InParanoid:Q9FNI3 OMA:LECQMDE PhylomeDB:Q9FNI3
ProtClustDB:CLSN2702250 Genevestigator:Q9FNI3 Uniprot:Q9FNI3
Length = 282
Score = 134 (52.2 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 34/107 (31%), Positives = 52/107 (48%)
Query: 118 KPASFAKTLTQSDANNGGGFSVPRYCAETIFP---------RLDYSADPPVQTILAKDVH 168
K + F K+LT SD +P+ AE FP D S+ + +D
Sbjct: 42 KESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES 101
Query: 169 GETWKFRHIYRGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGD 215
G++W+FR+ Y + + ++LT GWS FV K+L GD +VF + D
Sbjct: 102 GKSWRFRYSYWNSSQSYVLTKGWSRFVKDKQLDPGD-VVFFQRHRSD 147
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/85 (41%), Positives = 44/85 (51%)
Query: 618 GHCKVFMESEDVGRTLDLSLLGSYDELYKKLAEMFGIENAET-----LSH---LLYRDVT 669
G+ KV ME +GR LDLS+LGSY EL L MF N E H + Y D
Sbjct: 99 GYVKVKMEGLAIGRKLDLSILGSYAELLDTLHLMFPSTNQEDGHDRRRRHPYAVTYEDGE 158
Query: 670 GAVKHIGDEPFSDFMKTARRLTILM 694
G +GD P+ F K+ +RL IL+
Sbjct: 159 GDWMQVGDVPWEAFAKSVKRLKILV 183
>TAIR|locus:2064417 [details] [associations]
symbol:HSI2 "high-level expression of sugar-inducible
gene 2" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009737 "response to abscisic acid stimulus" evidence=TAS]
[GO:0009744 "response to sucrose stimulus" evidence=TAS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0010030 "positive regulation of seed germination"
evidence=IGI] [GO:2000034 "regulation of seed maturation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003340 InterPro:IPR011124 Pfam:PF02362 Pfam:PF07496
PROSITE:PS50863 PROSITE:PS51050 SMART:SM01019 GO:GO:0005739
GO:GO:0009737 GO:GO:0005634 GO:GO:0045892 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0010030
GO:GO:0009744 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:2.40.330.10 InterPro:IPR015300 SUPFAM:SSF101936 EMBL:U93215
HSSP:Q9ZWM9 EMBL:AB206553 EMBL:AY062492 IPI:IPI00532565 PIR:G84708
RefSeq:NP_850146.1 UniGene:At.27438 ProteinModelPortal:Q8W4L5
SMR:Q8W4L5 IntAct:Q8W4L5 STRING:Q8W4L5 PaxDb:Q8W4L5 PRIDE:Q8W4L5
EnsemblPlants:AT2G30470.1 GeneID:817597 KEGG:ath:AT2G30470
TAIR:At2g30470 eggNOG:NOG244543 HOGENOM:HOG000084353
InParanoid:Q8W4L5 OMA:CMNASCG PhylomeDB:Q8W4L5
ProtClustDB:CLSN2918136 Genevestigator:Q8W4L5 GO:GO:2000034
Uniprot:Q8W4L5
Length = 790
Score = 125 (49.1 bits), Expect = 0.00039, P = 0.00039
Identities = 32/95 (33%), Positives = 47/95 (49%)
Query: 122 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIY--R 179
F KTL+ SDA G +P+ CAE FP + S P++ +DV G W F+ Y
Sbjct: 295 FEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKI---QDVRGREWTFQFRYWPN 351
Query: 180 GTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENG 214
R ++L G + + L AGD++ F R + G
Sbjct: 352 NNSRMYVLE-GVTPCIQSMMLQAGDTVTFSRVDPG 385
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 703 675 0.0010 120 3 11 22 0.41 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 35
No. of states in DFA: 626 (67 KB)
Total size of DFA: 387 KB (2188 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 62.54u 0.08s 62.62t Elapsed: 00:00:03
Total cpu time: 62.54u 0.08s 62.62t Elapsed: 00:00:03
Start: Tue May 21 09:40:19 2013 End: Tue May 21 09:40:22 2013