BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005297
(703 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225442114|ref|XP_002273796.1| PREDICTED: GTP pyrophosphokinase-like [Vitis vinifera]
Length = 724
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/739 (73%), Positives = 606/739 (82%), Gaps = 54/739 (7%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCSA+H QIN+H+++DF+LNSRSS+S +++ + Q+ +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSASHPCQINSHSSHDFELNSRSSSSATASPS----QRPAMGGL 56
Query: 62 SCLFSSSS-------EMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS---PVSV 111
SCLFSS + E+GS + +ELSSSF C SSLKRD+S PVSV
Sbjct: 57 SCLFSSPAVKHAGGEELGSMWHDRGEELSSSF---------CYLGSSLKRDRSESSPVSV 107
Query: 112 FQGP---------------------------VSCSGSSGLFNGFVRNALGSCVDYDSSSF 144
FQGP VS G+SGLF+GFVR ALGS +DYDS +F
Sbjct: 108 FQGPVSCSSSVGGSSRSPPMRIARERSGGDGVSRVGTSGLFSGFVRGALGSYIDYDSPTF 167
Query: 145 RVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKA 204
+ G LN SS+ L+DELTFNMEDN + N E + K+ L AQL+HKIF EDFV+KA
Sbjct: 168 EI--GGGALNADSSSVLVDELTFNMEDNFPDSNSEPHVKDLLLGAQLRHKIFSEDFVVKA 225
Query: 205 FYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIF 264
FYEAERAHRGQMRASGDPYL HCVETA+LLA IGANSTVV +GLLHDTLDD+F+ YD IF
Sbjct: 226 FYEAERAHRGQMRASGDPYLQHCVETAVLLAKIGANSTVVVSGLLHDTLDDSFMGYDDIF 285
Query: 265 RTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRL 324
TFGAGVADLVEGVSKLSQLSKLAR+NNTASKTVEADRLHTMFLAMADARAVLIKLADRL
Sbjct: 286 GTFGAGVADLVEGVSKLSQLSKLARDNNTASKTVEADRLHTMFLAMADARAVLIKLADRL 345
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNMMTLDALPL K+QRFAKETLEIFVPLANRLGISTWK QLENLCFKHLNPDQH ELSSK
Sbjct: 346 HNMMTLDALPLGKQQRFAKETLEIFVPLANRLGISTWKEQLENLCFKHLNPDQHKELSSK 405
Query: 385 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 444
LV+ FDEAM+TSA EKLE ALKD+ IS+ VL GRHKSLYSI+CKMLKK +TMDEIHDI+G
Sbjct: 406 LVKSFDEAMITSAKEKLEPALKDEAISYHVLSGRHKSLYSIYCKMLKKNMTMDEIHDIHG 465
Query: 445 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQI 504
LRLIVENEEDCY+AL VVH+LW+EVPG+ KDYI KFNGY+SLHTVV GEG+VPLEVQI
Sbjct: 466 LRLIVENEEDCYKALGVVHRLWSEVPGRFKDYIKHSKFNGYRSLHTVVRGEGMVPLEVQI 525
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDS 564
RT+EMHLQAE+GFAAHWRYKEGDC HSSFVLQMVEWARWV+TW CE MSKD+S VG +S
Sbjct: 526 RTREMHLQAEYGFAAHWRYKEGDCTHSSFVLQMVEWARWVVTWHCETMSKDQSPVGYDNS 585
Query: 565 IKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGS 624
IKPPC FPSH+D CPFSYKP CS DGPVFVIM+ENDKMSVQE P +ST+MDLLER GRGS
Sbjct: 586 IKPPCKFPSHSDGCPFSYKPDCSQDGPVFVIMLENDKMSVQECPANSTIMDLLERTGRGS 645
Query: 625 SRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER 684
SRW+PYGFP+KEELRPRLNH+AV DP CKLKMGDVVELTPAIPDKSL YREEIQRMYER
Sbjct: 646 SRWTPYGFPIKEELRPRLNHEAVNDPTCKLKMGDVVELTPAIPDKSLIVYREEIQRMYER 705
Query: 685 GLAVSNTGPAVTSMVGSRS 703
G++VS+ A +SMVG RS
Sbjct: 706 GVSVSSKWSAASSMVGWRS 724
>gi|356558920|ref|XP_003547750.1| PREDICTED: uncharacterized protein LOC100787301 [Glycine max]
Length = 715
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/731 (74%), Positives = 603/731 (82%), Gaps = 47/731 (6%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQINAH +YDF+L SRSS+ STA +SQK +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQINAHASYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSC 60
Query: 64 LFSSS----------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQ 113
LFSS S S +E+KELSSS ++YSPSK GSS KRDQSPVSVF
Sbjct: 61 LFSSPAPAVKHAPPLSSNFSGEEDEMKELSSS--FSYSPSKFAGSS--WKRDQSPVSVFH 116
Query: 114 GPVSC------------------SGSSGLFNGFVRNALGS-CVDYDSSSFRVHNGDAVLN 154
GPVSC G+SGLF+GFVRNALGS C+DYD L+
Sbjct: 117 GPVSCSSSGRSSTGSSSRIRSFRGGTSGLFDGFVRNALGSSCLDYD------------LD 164
Query: 155 VGSSAALIDELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAH 212
G S+A+IDELTFN+EDN VEG + E YAK+ L AQ++HKIF E+FVIKAF EAE+AH
Sbjct: 165 AGDSSAMIDELTFNLEDNFVEGGFHFEPYAKKLLLGAQMRHKIFCEEFVIKAFCEAEKAH 224
Query: 213 RGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVA 272
RGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL+YDYI FGAGVA
Sbjct: 225 RGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGMFGAGVA 284
Query: 273 DLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDA 332
DLVEGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVLIKLADRLHNMMTLDA
Sbjct: 285 DLVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLIKLADRLHNMMTLDA 344
Query: 333 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA 392
LP+ KRQRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP H ELSSKLVE +D+A
Sbjct: 345 LPVAKRQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSHHEELSSKLVESYDDA 404
Query: 393 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 452
M+TSAIE+LE+ALKD+ IS+ V+ GRHKSLYS++CKMLKKKLT+D+IHDIYGLRLIV+ E
Sbjct: 405 MITSAIERLEEALKDEGISYNVISGRHKSLYSVYCKMLKKKLTIDDIHDIYGLRLIVDKE 464
Query: 453 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 512
EDCY+AL VVH+LW+EVPGK+KDYI RPKFNGYQSLHTVV GEG VPLEVQIRTK+MHLQ
Sbjct: 465 EDCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQ 524
Query: 513 AEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFP 572
AEFGFAAHWRYKE DCQHSSFVLQMVEWARWV+TWQCEAMS+D S VG DS+ PPC FP
Sbjct: 525 AEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVNPPCKFP 584
Query: 573 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGF 632
SHADDCP+SYKP C +GPVFVIMIENDKMSVQEF +STV+DLL+R+GR SSR + Y F
Sbjct: 585 SHADDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRF 644
Query: 633 PLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTG 692
PLKEELRPRLNHK V DP KLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RGL VS+ G
Sbjct: 645 PLKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMG 704
Query: 693 PAVTSMVGSRS 703
A ++MVGSRS
Sbjct: 705 TAASTMVGSRS 715
>gi|224054061|ref|XP_002298089.1| predicted protein [Populus trichocarpa]
gi|222845347|gb|EEE82894.1| predicted protein [Populus trichocarpa]
Length = 716
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/724 (74%), Positives = 603/724 (83%), Gaps = 50/724 (6%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QINAH YDF+LNSRSS++ SS+A++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINAHANYDFELNSRSSSTASSSASS--SQKPIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY-RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPV 109
S LFSS + E+G + R +ELKELSSSF Y+PSK C + SS+KRDQSPV
Sbjct: 59 SRLFSSPAVKHASFSGDREELGWHDRGDELKELSSSF--CYTPSK-CLAGSSIKRDQSPV 115
Query: 110 SVFQGPVSCS----------------------------GSSGLFNGFVRNALGSCVDYDS 141
SV QG VSCS G++GLFNGFVRNALGSCVDYDS
Sbjct: 116 SVLQGQVSCSSSPPTRIARERSGCDVGFQSSIHGSFRSGANGLFNGFVRNALGSCVDYDS 175
Query: 142 SSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFV 201
SF VHN ++ SS+ ++DELTF+MED+ V+ N E YAKE L AQ +H IF +DFV
Sbjct: 176 PSFEVHNNG--IDEDSSSVVVDELTFSMEDSCVDANYEPYAKELLFGAQSRHTIFCDDFV 233
Query: 202 IKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYD 261
IKAF+EAE+AHRGQMRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD+F+SYD
Sbjct: 234 IKAFHEAEKAHRGQMRASGDPYLQHCVETAVLLAIIGANSTVVAAGLLHDTLDDSFISYD 293
Query: 262 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLA 321
+IF+TFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLA
Sbjct: 294 HIFKTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLA 353
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNMMTLDALPL K+QRFAKET EIF PLANRLGIS+WK QLENLCFKHLNPDQH +L
Sbjct: 354 DRLHNMMTLDALPLVKQQRFAKETSEIFAPLANRLGISSWKEQLENLCFKHLNPDQHKDL 413
Query: 382 SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHD 441
S++LV+ FDEAM+ SA EKLE+AL D+ IS+ L GRHKSLYS +CKMLKKKL MD+IHD
Sbjct: 414 SARLVDSFDEAMIASAKEKLEKALTDEAISY-DLSGRHKSLYSTYCKMLKKKLNMDQIHD 472
Query: 442 IYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLE 501
I+GLRLIVEN EDCY+ALRVV +LW+EVPGK KDYI PKFNGY+SLHTVV GEG VPLE
Sbjct: 473 IHGLRLIVENNEDCYRALRVVQRLWSEVPGKFKDYINNPKFNGYRSLHTVVMGEGTVPLE 532
Query: 502 VQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGN 561
VQIRT+EMHLQAEFGFAAHWRYKEGD +HSSFVLQMVEWARWV+TWQCE MSKD S +G
Sbjct: 533 VQIRTREMHLQAEFGFAAHWRYKEGDSKHSSFVLQMVEWARWVITWQCETMSKDHSFIGC 592
Query: 562 GDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAG 621
GDSIKPPCTFPSH+D CP+SYKP C DGPVFVIMIE+DKMSVQEFP +STVMDLLERAG
Sbjct: 593 GDSIKPPCTFPSHSDGCPYSYKPHCGQDGPVFVIMIESDKMSVQEFPANSTVMDLLERAG 652
Query: 622 RGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRM 681
R SSRWSPYGFP+KEELRPRLNH+ V D CKLKMGDVVELTPAIPDKSL++YREEIQRM
Sbjct: 653 RTSSRWSPYGFPVKEELRPRLNHRPVYDVTCKLKMGDVVELTPAIPDKSLSDYREEIQRM 712
Query: 682 YERG 685
YERG
Sbjct: 713 YERG 716
>gi|356519788|ref|XP_003528551.1| PREDICTED: uncharacterized protein LOC100789399 [Glycine max]
Length = 714
Score = 1064 bits (2752), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/730 (73%), Positives = 600/730 (82%), Gaps = 46/730 (6%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPS VCS +HQIN H YDF+L SRSS+ STA +SQK +GGLSC
Sbjct: 1 MAVSTIALYASPPSGVCSTSHQINCHAGYDFELGSRSSSPAGSTAPPSTSQKPVMGGLSC 60
Query: 64 LFSSS----------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSVFQ 113
LFSS S S +E+KELSSS ++YSPSK GSS KRDQSPVSVF
Sbjct: 61 LFSSPAPPRKHAPQLSSNFSGEEDEMKELSSS--FSYSPSKFAGSS--WKRDQSPVSVFH 116
Query: 114 GPVSC-----------------SGSSGLFNGFVRNALGS-CVDYDSSSFRVHNGDAVLNV 155
GPVSC G+SGLF+GFVRNALGS C+DYD L+
Sbjct: 117 GPVSCSSSGRSSTGSTPIRSFRGGTSGLFDGFVRNALGSSCLDYD------------LDA 164
Query: 156 GSSAALIDELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHR 213
G S+A++DELTFN+EDN VEG + E YAK+ L AQ++HKIF E+FVIKAF EAE+AHR
Sbjct: 165 GDSSAMVDELTFNLEDNFVEGGFHFEPYAKKLLLGAQMRHKIFCEEFVIKAFCEAEKAHR 224
Query: 214 GQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVAD 273
GQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHD+LDDAFL+YDYI FG GVAD
Sbjct: 225 GQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLTYDYIVGVFGTGVAD 284
Query: 274 LVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDAL 333
LVEGVSKLS LSKLARENNTASK+VEADRLHTMFL MADARAVL+KLADRLHNMMTLDAL
Sbjct: 285 LVEGVSKLSHLSKLARENNTASKSVEADRLHTMFLGMADARAVLVKLADRLHNMMTLDAL 344
Query: 334 PLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM 393
P K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNP QH ELSSKLVE +D+AM
Sbjct: 345 PGAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQHEELSSKLVESYDDAM 404
Query: 394 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 453
+TSAIE+LEQALKD+ IS+ V+ GRHKSLYSI+CKMLKKKLT+D+IHDIYGLRLIV+ EE
Sbjct: 405 ITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIVDKEE 464
Query: 454 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 513
DCY+AL VVH+LW+EVPGK+KDYI RPKFNGYQSLHTVV GEG VPLEVQIRTK+MHLQA
Sbjct: 465 DCYKALTVVHRLWSEVPGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQA 524
Query: 514 EFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPS 573
+FGFAAHWRYKE DCQHSSFVLQMVEWARWV+TWQCEAMS+D S VG DS+KPPC FPS
Sbjct: 525 DFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKPPCKFPS 584
Query: 574 HADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFP 633
HA+DCP+SYKP C +GPVFVIMIENDKMSVQEF +STV+DLL+R+GR SSR + Y FP
Sbjct: 585 HAEDCPYSYKPDCGQNGPVFVIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFP 644
Query: 634 LKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGP 693
LKEELRPRLNHK V DP KLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RGL VS+ G
Sbjct: 645 LKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGT 704
Query: 694 AVTSMVGSRS 703
A ++M GSRS
Sbjct: 705 AASTMAGSRS 714
>gi|224070802|ref|XP_002303242.1| predicted protein [Populus trichocarpa]
gi|222840674|gb|EEE78221.1| predicted protein [Populus trichocarpa]
Length = 737
Score = 1055 bits (2727), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/745 (73%), Positives = 612/745 (82%), Gaps = 53/745 (7%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS+ + QINAH TYDF+LNSRSS++TSS+A++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSSPYPCQINAHATYDFELNSRSSSTTSSSASS--SQKPIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
S LFSS + E+GS R +ELKEL SSF Y+PSK + SS+KRDQS
Sbjct: 59 SRLFSSPAVKHASFSGDREELGSLWHDRGDELKELGSSF--CYTPSKYL-AGSSIKRDQS 115
Query: 108 PVSVFQGPVSCS----------------------------GSSGLFNGFVRNALGSCVDY 139
PVSV G VSCS G++GLFNGFVRNALGSCVDY
Sbjct: 116 PVSVLHGQVSCSSSPPMKTTRERSGCDVGFQSSIHGPYRGGANGLFNGFVRNALGSCVDY 175
Query: 140 DSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRED 199
DS SF V D V + GSS+ +DELTF MED+ VE N E YAK+ L AQ +HKIF +D
Sbjct: 176 DSPSFEVRR-DGV-DYGSSSVAVDELTFAMEDSFVEANYEPYAKKLLLGAQSRHKIFCDD 233
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FVIKAFYEAE+AHRGQMRASGDPYL HCVETA+LLA IGANS+VVAAGLLHD+LDD+FLS
Sbjct: 234 FVIKAFYEAEKAHRGQMRASGDPYLEHCVETAVLLAIIGANSSVVAAGLLHDSLDDSFLS 293
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIK 319
YDYIF+TFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIK
Sbjct: 294 YDYIFKTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIK 353
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM+TLDALPL K+QRFAKET++IF PLANRLGISTWK QLE LCFKHLNPDQH
Sbjct: 354 LADRLHNMITLDALPLVKQQRFAKETMQIFAPLANRLGISTWKEQLETLCFKHLNPDQHR 413
Query: 380 ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
LS++LVE FDEAM+ S EKL++AL D+ IS+ L GRHKSLYSIHCKM KKKL MD+I
Sbjct: 414 HLSARLVESFDEAMIASTKEKLDKALTDEAISY-NLHGRHKSLYSIHCKMSKKKLNMDQI 472
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HDI+GLRLIVEN+EDCY+ALRVVH LW+EVPG+ KDYIT PKFNGY+SLHTVV GEG VP
Sbjct: 473 HDIHGLRLIVENKEDCYRALRVVHCLWSEVPGQFKDYITNPKFNGYRSLHTVVMGEGTVP 532
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCV 559
LEVQIRTKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQ+VEWARWV+TWQCE MSKDR +
Sbjct: 533 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQVVEWARWVITWQCETMSKDRPSI 592
Query: 560 GNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLER 619
G DSIKPPCTFPSH+D CP+SYKP C DGP+F+IMIENDKMSVQEFP STVMDLLER
Sbjct: 593 GCDDSIKPPCTFPSHSDGCPYSYKPHCGQDGPIFIIMIENDKMSVQEFPADSTVMDLLER 652
Query: 620 AGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQ 679
AGR SSRWS YGFP+KEELRPRLNH+ V D CKLKMGDVVELTPAIPDKSL++YREEIQ
Sbjct: 653 AGRASSRWSAYGFPVKEELRPRLNHRPVHDATCKLKMGDVVELTPAIPDKSLSDYREEIQ 712
Query: 680 RMYERGLA-VSNTGPAVTSMVGSRS 703
RMYE G A VS+T PAV+ VG RS
Sbjct: 713 RMYEHGSATVSSTAPAVSGTVGRRS 737
>gi|33637487|gb|AAQ23899.1| RSH2 [Nicotiana tabacum]
Length = 718
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/729 (72%), Positives = 603/729 (82%), Gaps = 40/729 (5%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QIN+H +YDFDLN RSS+S+S+++++ K +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINSHGSYDFDLNGRSSSSSSTSSSS---GKSFVGGL 57
Query: 62 SCLFSSSSEMGSYRS--EELKELSSSFG-YAYSPSKLCGSSSSLKRDQSPVSVFQGPVSC 118
S LFSS + +Y + E+L L G S + SSSLKRDQSPVSVFQGP S
Sbjct: 58 SSLFSSPTVKANYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDQSPVSVFQGPAST 117
Query: 119 S------------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNGDAVLN 154
S G+ GLFNGFVR+ALGSCVD+D ++FRV + D+
Sbjct: 118 SSSGIGSCSRSPPRRIAGDVGSIRSGTGGLFNGFVRHALGSCVDHDPTTFRVLDVDS--- 174
Query: 155 VGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRG 214
S+ L+DELTFNME+ +E N E YAK+ L NAQ +HKIF +DFVIKAFYEAE+AHRG
Sbjct: 175 --PSSGLLDELTFNMEEGFLESNSEPYAKDLLLNAQSRHKIFCDDFVIKAFYEAEKAHRG 232
Query: 215 QMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADL 274
Q+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT GAGVADL
Sbjct: 233 QVRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADL 292
Query: 275 VEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP 334
VEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP
Sbjct: 293 VEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP 352
Query: 335 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 394
L K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+
Sbjct: 353 LAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLVKSFDEAMI 412
Query: 395 TSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEED 454
TS++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLRLIVEN+ED
Sbjct: 413 TSSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENKED 472
Query: 455 CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAE 514
CY+ALRVVHQLW+EVPG+ KDYI PKFNGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE
Sbjct: 473 CYKALRVVHQLWSEVPGRYKDYIANPKFNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAE 532
Query: 515 FGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSH 574
+GFAAHWRYKEG C+HSSFV QMVEWARWV+TWQCE M++D+S VG+ +SI+PPC FP+H
Sbjct: 533 YGFAAHWRYKEGACKHSSFVNQMVEWARWVVTWQCETMNRDQSSVGHTESIQPPCKFPAH 592
Query: 575 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 634
++DCPFS KP C DGPVF+IMI+NDKMSVQEFP +STV DLLERAGRGSSRW+PYGFPL
Sbjct: 593 SEDCPFSCKPNCGTDGPVFIIMIDNDKMSVQEFPANSTVKDLLERAGRGSSRWTPYGFPL 652
Query: 635 KEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPA 694
KEELRPRLNH+ V DP CKL+MGDV+ELTP IP KSLTEYREEIQRMY+RG++ PA
Sbjct: 653 KEELRPRLNHEPVSDPNCKLRMGDVIELTPTIPHKSLTEYREEIQRMYDRGVS---PLPA 709
Query: 695 VTSMVGSRS 703
++VG RS
Sbjct: 710 ANAVVGLRS 718
>gi|15081594|gb|AAK82651.1| RSH-like protein [Capsicum annuum]
Length = 721
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/739 (70%), Positives = 599/739 (81%), Gaps = 57/739 (7%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAVPTIALYASPPSSVCS +Q ++H +YDFDLN RS++S+SST ++ SQK +GGLS
Sbjct: 1 MAVPTIALYASPPSSVCSTPYQCHSHASYDFDLNGRSTSSSSSTTSS--SQKSIVGGLSS 58
Query: 64 LFSSSSEMGSYRS--EEL----------KELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
LFSS + +Y + E+L ELSSSF SSLKRD QSPVS
Sbjct: 59 LFSSPTVKANYSTGTEDLGLGSLWHDRGDELSSSF-----------RGSSLKRDHQSPVS 107
Query: 111 VFQGPVSCS--------------------------GSSGLFNGFVRNALGSCVDYDSSSF 144
VFQGPVSCS GS GLFNGFVR+ALGSCVD+D ++F
Sbjct: 108 VFQGPVSCSTSSSGIGSYSRSPPKRIGGDVCSIRSGSGGLFNGFVRHALGSCVDHDPATF 167
Query: 145 RVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKA 204
+V + D+ S+ L+DELTFNME+ +E N E YAK L AQ +HKIF +DFV+KA
Sbjct: 168 QVLDVDS-----GSSGLLDELTFNMEEGFLESNSEPYAKNLLLGAQARHKIFYDDFVVKA 222
Query: 205 FYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIF 264
FYEAE+AHRGQ+RA+GDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIF
Sbjct: 223 FYEAEKAHRGQVRATGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFITYDYIF 282
Query: 265 RTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRL 324
RT GAGVADLVEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAM DARAVL+KLADRL
Sbjct: 283 RTLGAGVADLVEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMTDARAVLVKLADRL 342
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNM+TLDALP K+QRFAKETLEIF PLANRLGISTWK QLEN CFKHLNPDQH ELSSK
Sbjct: 343 HNMITLDALPPMKQQRFAKETLEIFAPLANRLGISTWKEQLENQCFKHLNPDQHNELSSK 402
Query: 385 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 444
L++ FDEAM+TSA+ KLEQALKDK++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+G
Sbjct: 403 LMDSFDEAMITSAVGKLEQALKDKSLSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHG 462
Query: 445 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQI 504
LRLIVE EEDCY+AL+VVHQLW EVPG+ KDYI +PK NGYQSLHTVV GEG+VPLEVQI
Sbjct: 463 LRLIVETEEDCYKALQVVHQLWCEVPGRSKDYIAKPKCNGYQSLHTVVLGEGMVPLEVQI 522
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDS 564
RTKEMHLQAE+GFAAHWRYKE DC+HSSFVLQMVEWARWV+TWQCE MS+D+S VG+ +S
Sbjct: 523 RTKEMHLQAEYGFAAHWRYKEDDCKHSSFVLQMVEWARWVVTWQCETMSRDQSSVGHTES 582
Query: 565 IKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGS 624
I+PPC FP+H++DCPFS KP C DGPVF+IMIENDKMSVQEF +STV DLLERAGRGS
Sbjct: 583 IQPPCKFPAHSEDCPFSCKPDCGTDGPVFIIMIENDKMSVQEFAANSTVKDLLERAGRGS 642
Query: 625 SRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER 684
SRW+PYGFPLKEELRPRLNH+ V DP CKL+MGDV+ELTPAI KSLTEYREEIQRMY+R
Sbjct: 643 SRWTPYGFPLKEELRPRLNHEPVSDPNCKLRMGDVIELTPAIRHKSLTEYREEIQRMYDR 702
Query: 685 GLAVSNTGPAVTSMVGSRS 703
G++ A ++VG RS
Sbjct: 703 GVSPLPAAAAANTVVGLRS 721
>gi|37196706|dbj|BAC97801.1| RelA-SpoT like protein PsRSH1 [Pisum sativum]
Length = 729
Score = 1027 bits (2655), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/733 (72%), Positives = 585/733 (79%), Gaps = 40/733 (5%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQ-KQTIGGLS 62
MAV TI+LYASPPSSVCSA HQI+ H +YDFD SRSS+ S+ A S+ K IGGLS
Sbjct: 1 MAVSTISLYASPPSSVCSAPHQISPHASYDFDFGSRSSSPASTATATASTSAKPMIGGLS 60
Query: 63 CLFSSS---------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-----QSP 108
CLFSSS S +ELKEL SSF +YSPSK GS KRD QSP
Sbjct: 61 CLFSSSVAMKHVPLASSFSGGDEDELKELGSSF--SYSPSKFGGS---WKRDYQNQIQSP 115
Query: 109 VSVFQGPVSC-----------SGSSGLFNGFVRNALGS-CVDYDSSSFRVHNGDAVLNVG 156
VSVFQ PVSC S + G F GFVR ALGS C++YDS+ R+ G
Sbjct: 116 VSVFQCPVSCGSSMGTVRSSRSSAGGFFEGFVRRALGSSCLEYDSTGVRLRRGGGGGGEF 175
Query: 157 SSA---ALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKHKIFREDFVIKAFYEAE 209
AL+DELTFN+ED +EG E YAK+ L +AQL+HKIF E+FVIKAF EAE
Sbjct: 176 DGGSSSALVDELTFNLEDTFIEGCFGFEFEPYAKKLLMSAQLRHKIFCEEFVIKAFCEAE 235
Query: 210 RAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGA 269
+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDTLDDAFL+YDYIF FGA
Sbjct: 236 KAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTLDDAFLTYDYIFGMFGA 295
Query: 270 GVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMT 329
GVADLV GVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMT
Sbjct: 296 GVADLVGGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMT 355
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
LDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +
Sbjct: 356 LDALPVAKQQRFAKETLEIFAPLANRLGIANWKEQLENLCFKHLNPVQHMELSSKLVESY 415
Query: 390 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 449
D+AM+ SAI +LEQALKD+ IS+ V+ GRHKSLYSI+CKMLKKKLT+D+IHDIYGLRLIV
Sbjct: 416 DDAMIASAINRLEQALKDEGISYHVISGRHKSLYSIYCKMLKKKLTIDDIHDIYGLRLIV 475
Query: 450 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 509
E EEDCY+AL+VVHQLW EVPGK+KDYI PKFNGYQSLHTVV GEG +PLEVQ+RTK+M
Sbjct: 476 EKEEDCYKALKVVHQLWLEVPGKLKDYIRGPKFNGYQSLHTVVMGEGKIPLEVQVRTKDM 535
Query: 510 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPC 569
H QAEFGFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKP C
Sbjct: 536 HSQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGCVDSIKPYC 595
Query: 570 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSP 629
FPSHAD+CP+SYKP C+ DGPVFVIMIENDKMSVQEF +STV+DLLERAGR S R +
Sbjct: 596 KFPSHADNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANSTVLDLLERAGRASCRLTT 655
Query: 630 YGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVS 689
Y FPLKEELRPRLNHK V DP CKLKMGDVVELTPAIPDK LTEYREEIQRMY+RGL VS
Sbjct: 656 YRFPLKEELRPRLNHKPVSDPNCKLKMGDVVELTPAIPDKYLTEYREEIQRMYDRGLTVS 715
Query: 690 NTGPAV-TSMVGS 701
G +SMVG+
Sbjct: 716 KMGTTTASSMVGT 728
>gi|357514019|ref|XP_003627298.1| GTP pyrophosphokinase [Medicago truncatula]
gi|66947621|emb|CAJ00006.1| RelA-SpoT homolog 1 [Medicago truncatula]
gi|355521320|gb|AET01774.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 726
Score = 1008 bits (2606), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/734 (71%), Positives = 590/734 (80%), Gaps = 45/734 (6%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAASTSG--KSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGSSG----------------LFNGFVRNALGS-CVDYDSSSFRVHNGDAVLN 154
FQ PVSCS S G +GFVR+ALGS C+DYDS+ R+ G +
Sbjct: 112 FQCPVSCSSSIGAGTGTVRSGRGSTGGGFLDGFVRSALGSSCLDYDSTGVRLRGGGGEFD 171
Query: 155 VGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKHKIFREDFVIKAFYEAE 209
+ ++DELTFN++D VEG +E YAK+ L NAQL+HKIF E+FVIKAF EAE
Sbjct: 172 GVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAE 231
Query: 210 RAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGA 269
+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGA
Sbjct: 232 KAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGA 291
Query: 270 GVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMT 329
GVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMT
Sbjct: 292 GVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMT 351
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
LDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +
Sbjct: 352 LDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESY 411
Query: 390 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 449
D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKKLT+D+IHDIYGLRLIV
Sbjct: 412 DDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIV 471
Query: 450 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 509
+ EEDCY+AL+VVH+LW+EV GK+KDYI PKFNGYQSLHTVV GEG VPLEVQ+RTK+M
Sbjct: 472 DKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVMGEGKVPLEVQVRTKDM 531
Query: 510 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPC 569
HLQAEFGFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKPPC
Sbjct: 532 HLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPC 591
Query: 570 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSP 629
FPSHAD+CP+SYKP C+ DGPVFVIMIENDKMSVQEF +STV+DLLER GR S R +
Sbjct: 592 KFPSHADNCPYSYKPDCAQDGPVFVIMIENDKMSVQEFCANSTVLDLLERVGRASCRLTT 651
Query: 630 YGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVS 689
Y FPLKEELRPRLNHK V DP CKLKMGDV+ELTPAIPDK LTEYREEIQRMY+RGL VS
Sbjct: 652 YRFPLKEELRPRLNHKPVSDPNCKLKMGDVIELTPAIPDKYLTEYREEIQRMYDRGLTVS 711
Query: 690 NTGPAVT--SMVGS 701
+ G T SMVG+
Sbjct: 712 SMGSTATASSMVGT 725
>gi|449461673|ref|XP_004148566.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
gi|449528710|ref|XP_004171346.1| PREDICTED: GTP pyrophosphokinase-like [Cucumis sativus]
Length = 733
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/740 (68%), Positives = 587/740 (79%), Gaps = 60/740 (8%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIA Y SPPS++CS+ H QIN H + D + SRSS+ SSTAA+ SQK +GGL
Sbjct: 1 MAVPTIAFYTSPPSTICSSPHPCQINTHASCDLEFTSRSSSLASSTAAS--SQKPMVGGL 58
Query: 62 SCLFSSSS---------------EMGSYR---SEELKELSSSFGYAYSPSKLCGSSSSLK 103
S LFSS++ E+GS+R +ELKELSSSF YSP+K GS
Sbjct: 59 SSLFSSTAPRLSSSSASISSGGDELGSFRHDKGDELKELSSSF--RYSPNKFIGSF--FN 114
Query: 104 RDQSPVSVFQGPVSCS-----------------------------GSSGLFNGFVRNALG 134
RDQSPVSVFQGPVSC G++ LF+GFVRNALG
Sbjct: 115 RDQSPVSVFQGPVSCGSCGFGSAARTPPLWTVRERSGDGSFHGRGGTNRLFSGFVRNALG 174
Query: 135 SCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHK 194
SCVDYDS V + L+VGSSA DELTFNMEDNI EGN E+YAK+ L +AQ KHK
Sbjct: 175 SCVDYDSPRLEVSSDG--LDVGSSALFGDELTFNMEDNITEGNSESYAKDLLLSAQSKHK 232
Query: 195 IFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
IF ++FV+KAF+EAE+AHRGQ+RASGDPYL HCVETA++LA +GANSTVVAAGLLHDT+D
Sbjct: 233 IFCDEFVVKAFFEAEKAHRGQLRASGDPYLEHCVETAVMLALVGANSTVVAAGLLHDTID 292
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADAR 314
D+F+++DYI TFGA VADLVEGVSKLS LSKLARE++TA +TVEADRLHTMFLAMADAR
Sbjct: 293 DSFVTHDYILGTFGAEVADLVEGVSKLSHLSKLAREHDTAERTVEADRLHTMFLAMADAR 352
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
AVL+KLADRLHNMMTLDALP K+QRFAKET+EIFVPLANRLGI TWK QLEN+CFKHLN
Sbjct: 353 AVLVKLADRLHNMMTLDALPPIKQQRFAKETMEIFVPLANRLGIYTWKEQLENMCFKHLN 412
Query: 375 PDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+QH +LSSKL+ +DEA++ SA +KLE+ALKDK IS+ V+ GRHKS+YSIH KMLKK L
Sbjct: 413 LEQHEDLSSKLLGLYDEAIIFSATQKLERALKDKGISYHVVTGRHKSVYSIHRKMLKKNL 472
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T++EIHDI+GLRLIVENEEDCY+ALR+VHQLW VPGK+KDYI++PK NGYQS+HTVV G
Sbjct: 473 TVNEIHDIHGLRLIVENEEDCYEALRIVHQLWPNVPGKLKDYISKPKLNGYQSIHTVVRG 532
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
EG VPLEVQIRTKEMHLQAEFGFAAHWRYKEGD +HSSFVLQMVEWARWVLTW CE M+K
Sbjct: 533 EGDVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDSKHSSFVLQMVEWARWVLTWHCETMNK 592
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
DR +G S++PPC FP H+ DC +SYKP+ DGP+FVIMIEN+KMSVQEFP +T+M
Sbjct: 593 DRPSIG---SVRPPCKFPFHSSDCSYSYKPRYFQDGPLFVIMIENEKMSVQEFPADATMM 649
Query: 615 DLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEY 674
DLLERAGRGS+RW+ Y FP+KEELRPRLNH+ V DP+CKLKMGDVVELTP IPDK L EY
Sbjct: 650 DLLERAGRGSTRWAHYRFPMKEELRPRLNHEPVSDPKCKLKMGDVVELTPPIPDKLLVEY 709
Query: 675 REEIQRMYERGLAVSNTGPA 694
REEIQRMYE G V+ PA
Sbjct: 710 REEIQRMYEGGFTVATPQPA 729
>gi|157741797|gb|ABV69554.1| RelA/SpoT-like protein [Ipomoea nil]
Length = 727
Score = 988 bits (2555), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/738 (69%), Positives = 582/738 (78%), Gaps = 49/738 (6%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSV S + QIN+H ++DFD NSRSS+S S+T ++ SQK +GGL
Sbjct: 1 MAVPTIALYASPPSSVYSTPYSCQINSHASHDFDFNSRSSSSASTTTSS--SQKPAVGGL 58
Query: 62 SCLFSSSS-------EMGSYRSEELKELSSSFGY-AYSPSKLCGSSSSLKRDQ---SPVS 110
SCLFS+ S S +E+L L G S + SSSLKRDQ SP++
Sbjct: 59 SCLFSTQSVKHASSSSSFSSGTEDLGSLWHDRGEELSSSFRGSSLSSSLKRDQGHHSPMT 118
Query: 111 VFQGPV-------------------------SCSGSSGLFNGFVRNALGSCVDYDSSSFR 145
V QGP S SGS GLFNGFVR+ALGSCVDYD +
Sbjct: 119 VLQGPGSSNGSGGIGACSRSPSKRIGGDFYSSRSGSGGLFNGFVRHALGSCVDYDPVNLH 178
Query: 146 VHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAF 205
+ + D+ + L+DELTFN++D + LE YAK+ L +AQ +HKIF +D V+KAF
Sbjct: 179 LRDSDS-----APPGLLDELTFNIDDGFGDSKLEPYAKDLLLDAQARHKIFHDDLVVKAF 233
Query: 206 YEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFR 265
EAE AHRGQMRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++Y+YI
Sbjct: 234 CEAENAHRGQMRASGDPYLQHCVETAVLLATIGANSTVVAAGLLHDTLDDTFVTYNYISL 293
Query: 266 TFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLH 325
+FGAGVADLVEGVSKLS LSKLAREN+TA+K VEADRLHTMFLAMADARAVLIKLADRLH
Sbjct: 294 SFGAGVADLVEGVSKLSHLSKLARENDTANKIVEADRLHTMFLAMADARAVLIKLADRLH 353
Query: 326 NMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL 385
NMMTLD+LP+ K+QRFAKETLEIF PLANRLGISTWK QLENLCFK+LNP QH EL+SKL
Sbjct: 354 NMMTLDSLPMIKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKYLNPVQHKELTSKL 413
Query: 386 VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGL 445
V FDEAMVTSA+EKLE+ALKD++IS+ L GRHKSLYSIH KM KKKL MDEIHDI+GL
Sbjct: 414 VTSFDEAMVTSAVEKLERALKDESISYHSLSGRHKSLYSIHRKMSKKKLNMDEIHDIHGL 473
Query: 446 RLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIR 505
R+IVENEEDCY+A VVHQLW EVPGK KDYI PKFNGYQSLHTVVT EG+VPLEVQIR
Sbjct: 474 RIIVENEEDCYKAATVVHQLWPEVPGKFKDYILHPKFNGYQSLHTVVTREGMVPLEVQIR 533
Query: 506 TKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSI 565
TKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW CEAMSKD+ + + DSI
Sbjct: 534 TKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVITWHCEAMSKDQPSISHSDSI 593
Query: 566 KPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSS 625
KPPC FPSH++DCPFS P+C DGPV+VIMIENDKMSVQE STVMDLLE+AGRGSS
Sbjct: 594 KPPCKFPSHSEDCPFSCIPECGADGPVYVIMIENDKMSVQELAAHSTVMDLLEKAGRGSS 653
Query: 626 RWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG 685
RW PYGFP+KEELRPRLNH + DP CKLKMGDV+ELTPAIPDKSLTEYREEIQRMY+RG
Sbjct: 654 RWIPYGFPVKEELRPRLNHSPIIDPTCKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRG 713
Query: 686 LAVSNTGPAVTSMVGSRS 703
V+ + T+M G RS
Sbjct: 714 PNVATS----TTMAGLRS 727
>gi|145336732|ref|NP_564652.2| RELA/SPOT homolog 3 [Arabidopsis thaliana]
gi|4587556|gb|AAD25787.1|AC006577_23 Similar to gi|1653162 (p)ppGpp 3-pyrophosphohydrolase from
Synechocystis sp genome gb|D90911. EST gb|W43807 comes
from this gene [Arabidopsis thaliana]
gi|110742595|dbj|BAE99211.1| RSH3 [Arabidopsis thaliana]
gi|332194932|gb|AEE33053.1| RELA/SPOT homolog 3 [Arabidopsis thaliana]
Length = 715
Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/733 (68%), Positives = 568/733 (77%), Gaps = 66/733 (9%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSRSS+++SST++ TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSSP------TIGGLSLLFSG 59
Query: 68 ----------------SSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCS---------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNG 149
V GP+S GSS LFNGFVR A+GSCVDYD+ S
Sbjct: 119 VLHGPISSGNSPPMRISRDRNLDGGSALRVGSSRLFNGFVRKAIGSCVDYDTDS------ 172
Query: 150 DAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
L+DE L F M+D + YA++ L AQLKHKIF ++ VIKAFYEA
Sbjct: 173 ----------VLVDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIFEDESVIKAFYEA 222
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG
Sbjct: 223 EKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFG 282
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
+GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMM
Sbjct: 283 SGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 342
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TL ALP KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH E+S L +
Sbjct: 343 TLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDS 402
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLI
Sbjct: 403 FDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLI 462
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
V+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKE
Sbjct: 463 VDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKE 522
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + S +P
Sbjct: 523 MHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC---SSEPL 579
Query: 569 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 628
C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RAG GSSRWS
Sbjct: 580 CSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGSSRWS 639
Query: 629 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAV 688
Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA
Sbjct: 640 MYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAF 699
Query: 689 SNTGPAVT-SMVG 700
S A T +MVG
Sbjct: 700 SRPHRAATGTMVG 712
>gi|297847822|ref|XP_002891792.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
gi|297337634|gb|EFH68051.1| hypothetical protein ARALYDRAFT_892466 [Arabidopsis lyrata subsp.
lyrata]
Length = 715
Score = 970 bits (2508), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/733 (68%), Positives = 569/733 (77%), Gaps = 66/733 (9%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSR+S+++SST + TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHVSCDLDLNSRTSSASSSTNSP------TIGGLSLLFSG 59
Query: 68 SS----------------EMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
+S E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPTVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCS---------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNG 149
V GP+S GSS LFNGFVR A+GSCVDYD+ S
Sbjct: 119 VLHGPISSGNSPPMRISRDRNFDGGSSLRVGSSRLFNGFVRKAIGSCVDYDTDS------ 172
Query: 150 DAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
L+DE L F M+D + YA++ L AQLKHKIF ++ VIKAFYEA
Sbjct: 173 ----------VLVDEQLPFTMDDGFEGERKQPYARDLLRRAQLKHKIFEDESVIKAFYEA 222
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG
Sbjct: 223 EKAHRGQMRANGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFG 282
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
+GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMM
Sbjct: 283 SGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 342
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TL ALP K+QRFAKETLEIF PLANRLGIS+WKV+LEN+CFKHL PDQH E+S L +
Sbjct: 343 TLYALPPVKQQRFAKETLEIFAPLANRLGISSWKVELENMCFKHLYPDQHHEMSDMLEDS 402
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
F+EAM+TSAI KLEQALK + IS+ VL GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLI
Sbjct: 403 FNEAMITSAIGKLEQALKKEGISYHVLSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLI 462
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
V+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKE
Sbjct: 463 VDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKE 522
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKDRS + S +P
Sbjct: 523 MHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDRSSIC---SSEPL 579
Query: 569 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 628
C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV+DLL RAG GSSRWS
Sbjct: 580 CSFPSHAEDCPFSYKPNGNQEGPVYVIVIENEKMTVQEFPANSTVLDLLSRAGPGSSRWS 639
Query: 629 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAV 688
Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA
Sbjct: 640 MYSIPAKEELRPRLNQTPVNDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAF 699
Query: 689 SNT-GPAVTSMVG 700
S + A +MVG
Sbjct: 700 SRSHSAAAGTMVG 712
>gi|297834248|ref|XP_002885006.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
gi|297330846|gb|EFH61265.1| hypothetical protein ARALYDRAFT_897663 [Arabidopsis lyrata subsp.
lyrata]
Length = 714
Score = 969 bits (2504), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/731 (69%), Positives = 573/731 (78%), Gaps = 63/731 (8%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASPPSSVCS HQI+ D DL SRSS+++ S ++P QK +GGLS LFS
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSPSMVSSP--QKPIVGGLSSLFSG 59
Query: 68 S------------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSP 108
+ S + RS++LK+LS S + YSP+K +SS L+RD QSP
Sbjct: 60 ASVKSSASSCSYSTGVDEFSSVRYDRSDDLKDLSLSSSFCYSPAKFV-NSSYLRRDLQSP 118
Query: 109 VSVFQGPVSCS-------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNG 149
+SV GPVSCS G+SGLFNGFVR ALGSCVDY+
Sbjct: 119 ISVLHGPVSCSCSPPMRMSRDRNLDGSFRLGASGLFNGFVRKALGSCVDYE--------- 169
Query: 150 DAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAE 209
+GS + L+DELTF MED + YA++ L AQL+HKIF+++ VIKAFYEAE
Sbjct: 170 -----LGSDSVLVDELTFPMEDGFGVDTRKPYARDLLRRAQLRHKIFKDESVIKAFYEAE 224
Query: 210 RAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGA 269
+AHRGQMRASGDPYL HCVETAMLLA IGA+STVV AGLLHDT+DD+F+SYDYI R FGA
Sbjct: 225 KAHRGQMRASGDPYLQHCVETAMLLANIGASSTVVVAGLLHDTMDDSFMSYDYILRNFGA 284
Query: 270 GVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMT 329
GVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM T
Sbjct: 285 GVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKT 344
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
L AL K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + F
Sbjct: 345 LYALSPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSF 404
Query: 390 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 449
DEAM+TSAIEKLEQALK + IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLIV
Sbjct: 405 DEAMITSAIEKLEQALKKEGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLIV 464
Query: 450 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 509
+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+EM
Sbjct: 465 DNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQEM 524
Query: 510 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPC 569
HLQAEFGFAAHWRYKEGDC++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPPC
Sbjct: 525 HLQAEFGFAAHWRYKEGDCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPPC 584
Query: 570 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSP 629
FPSH++DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS
Sbjct: 585 KFPSHSEDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWSM 644
Query: 630 YGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVS 689
YG P KEELRPRLN + V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA S
Sbjct: 645 YGIPAKEELRPRLNQRPVSDLKWKLKMGDVVELTPTIPDESLTEYREEIQRMYDRGLAFS 704
Query: 690 NTGPAVTSMVG 700
G +MVG
Sbjct: 705 RPG----TMVG 711
>gi|449480518|ref|XP_004155918.1| PREDICTED: uncharacterized LOC101204461 [Cucumis sativus]
Length = 734
Score = 966 bits (2498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/743 (66%), Positives = 573/743 (77%), Gaps = 72/743 (9%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
M VPTIALYA PPSS+CS TH QINAH++ DF++ SR S+++S+ +A+ QK GGL
Sbjct: 1 MGVPTIALYAGPPSSICS-THPCQINAHSSLDFEIGSRPSSASSTASAS---QKSVAGGL 56
Query: 62 SCLFSSS---------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLK 103
SCLFS+S E+GS R EEL Y SSL
Sbjct: 57 SCLFSASPVRHVSSTTSFSGCGEELGSLWHDRGEELSSSFRYSSSKYL-------GSSLA 109
Query: 104 RDQSPVSVFQGPVSCS-------------------------------GSSGLFNGFVRNA 132
RD SPVSVFQGPVSC GS+G FNGF+RNA
Sbjct: 110 RDSSPVSVFQGPVSCCSSGVGSTAKSPPISISREKSGESNFQSSIGVGSNGFFNGFLRNA 169
Query: 133 LGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLK 192
GS +D VH L+V SSA L+DELTFN+ED E E YAK+ L AQ++
Sbjct: 170 SGSYLD-------VHRN--ALDVSSSAVLMDELTFNLEDGFGECTSEPYAKDMLLGAQIR 220
Query: 193 HKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDT 252
HKIF ++FVIKAFYEAE+AHRGQMRASGDPYL HCVETAMLLA IGANSTVVAAGLLHD
Sbjct: 221 HKIFLDEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAMLLATIGANSTVVAAGLLHDA 280
Query: 253 LDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 312
LDD+F+ YDYI + GAGVADLVE VS+LS LSKLARENNTA+KTVEADRLHTMFLAMAD
Sbjct: 281 LDDSFMCYDYILGSVGAGVADLVEEVSQLSHLSKLARENNTANKTVEADRLHTMFLAMAD 340
Query: 313 ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKH 372
RAVL+KLADRLHNMMTLDALPL KR RFAKET+EIFVPLANRLGI +WK QLENLCFKH
Sbjct: 341 TRAVLVKLADRLHNMMTLDALPLTKRLRFAKETMEIFVPLANRLGILSWKEQLENLCFKH 400
Query: 373 LNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
L+P++H ELSSKLV+ FD +TSAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML+K
Sbjct: 401 LHPEEHKELSSKLVDSFDSERITSAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKMLRK 460
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
KLTMDEIHDI+G+RLIV+NEEDC +ALR+VHQLW+EVPG+ KDYI+RPKFNGY+SLHTVV
Sbjct: 461 KLTMDEIHDIHGIRLIVKNEEDCQKALRIVHQLWSEVPGRCKDYISRPKFNGYRSLHTVV 520
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 552
GE + LEVQIRTKEMHLQAEFG AAHWRYKEGD ++S FV+QMVEWARWV+TWQC +M
Sbjct: 521 VGEDMAHLEVQIRTKEMHLQAEFGIAAHWRYKEGDSEYSPFVVQMVEWARWVVTWQCLSM 580
Query: 553 SKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQC-SHDGPVFVIMIENDKMSVQEFPTSS 611
SKD S V + DSI+PPC FPSH++ CP+SYK QC DGPVFVI IENDKMSVQEFP +S
Sbjct: 581 SKDGSSVDSADSIRPPCKFPSHSEGCPYSYKTQCDGQDGPVFVITIENDKMSVQEFPANS 640
Query: 612 TVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSL 671
T+ +L+ER GRGS+RW+ +GFP+KE+LRPR+NHK V DP CKLKMGDVVELTP IPDKSL
Sbjct: 641 TITNLMERCGRGSARWTSHGFPMKEDLRPRVNHKRVNDPTCKLKMGDVVELTPTIPDKSL 700
Query: 672 TEYREEIQRMYERGLAVSNTGPA 694
TEYREEIQRMY+RG+ VSN+GP+
Sbjct: 701 TEYREEIQRMYDRGITVSNSGPS 723
>gi|7141308|gb|AAF37283.1|AF225704_1 RSH3 [Arabidopsis thaliana]
Length = 712
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/733 (68%), Positives = 565/733 (77%), Gaps = 69/733 (9%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASP S+VCS HQINAH + D DLNSRSS+++SST++ TIGGLS LFS
Sbjct: 6 TIALYASPASTVCSTAHQINAHISCDLDLNSRSSSASSSTSSP------TIGGLSLLFSG 59
Query: 68 ----------------SSEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPVS 110
E+ S R + ++ + S + YSPSK GSS LKRD QSPVS
Sbjct: 60 ASVKSSSSSSSSHPSVGEELASIRHDRSEDRTLSGSFCYSPSKFIGSSY-LKRDHQSPVS 118
Query: 111 VFQGPVSCS---------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNG 149
V GP+S GSS LFNGFVR A+GSCVDYD+ S
Sbjct: 119 VLHGPISSGNSPPMRISRDRNLDGGSALRVGSSRLFNGFVRKAIGSCVDYDTDS------ 172
Query: 150 DAVLNVGSSAALIDE-LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
L+DE L F M+D + YA++ L AQLKHKIF ++ VIKAFYEA
Sbjct: 173 ----------VLVDEQLPFTMDDGFEGERRQPYARDLLRRAQLKHKIFEDESVIKAFYEA 222
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQMRA+GDPYL HCVETAMLLA IGANSTVV AG+LHDTLDD+F+SYDYI RTFG
Sbjct: 223 EKAHRGQMRATGDPYLQHCVETAMLLADIGANSTVVVAGILHDTLDDSFMSYDYILRTFG 282
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
+GVADLVEGVS QLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNMM
Sbjct: 283 SGVADLVEGVS---QLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 339
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TL ALP KRQRFAKETLEIF PLANRLGIS+WKV+LENLCFKHL+PDQH E+S L +
Sbjct: 340 TLYALPPVKRQRFAKETLEIFAPLANRLGISSWKVKLENLCFKHLHPDQHHEMSDMLEDS 399
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIHDI+GLRLI
Sbjct: 400 FDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIHDIHGLRLI 459
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
V+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PLEVQIRTKE
Sbjct: 460 VDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPLEVQIRTKE 519
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + S +P
Sbjct: 520 MHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC---SSEPL 576
Query: 569 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 628
C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KMSVQEFP +STV DLL RAG GSSRWS
Sbjct: 577 CSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMSVQEFPENSTVSDLLRRAGPGSSRWS 636
Query: 629 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAV 688
Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+RGLA
Sbjct: 637 MYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDRGLAF 696
Query: 689 SNTGPAVT-SMVG 700
S A T +MVG
Sbjct: 697 SRPHRAATGTMVG 709
>gi|449447898|ref|XP_004141703.1| PREDICTED: uncharacterized protein LOC101204461 [Cucumis sativus]
Length = 738
Score = 961 bits (2483), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/747 (65%), Positives = 573/747 (76%), Gaps = 76/747 (10%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
M VPTIALYA PPSS+CS TH QINAH++ DF++ SR S+++S+ +A+ QK GGL
Sbjct: 1 MGVPTIALYAGPPSSICS-THPCQINAHSSLDFEIGSRPSSASSTASAS---QKSVAGGL 56
Query: 62 SCLFSSS---------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLK 103
SCLFS+S E+GS R EEL Y SSL
Sbjct: 57 SCLFSASPVRHVSSTTSFSGCGEELGSLWHDRGEELSSSFRYSSSKYL-------GSSLA 109
Query: 104 RDQSPVSVFQGPVSCS-------------------------------GSSGLFNGFVRNA 132
RD SPVSVFQGPVSC GS+G FNGF+RNA
Sbjct: 110 RDSSPVSVFQGPVSCCSSGVGSTAKSPPISISREKSGESNFQSSIGVGSNGFFNGFLRNA 169
Query: 133 LGSCVDYDSSSFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLK 192
GS +D VH L+V SSA L+DELTFN+ED E E YAK+ L AQ++
Sbjct: 170 SGSYLD-------VHRN--ALDVSSSAVLMDELTFNLEDGFGECTSEPYAKDMLLGAQIR 220
Query: 193 HKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDT 252
HKIF ++FVIKAFYEAE+AHRGQMRASGDPYL HCVETAMLLA IGANSTVVAAGLLHD
Sbjct: 221 HKIFLDEFVIKAFYEAEKAHRGQMRASGDPYLQHCVETAMLLATIGANSTVVAAGLLHDA 280
Query: 253 LDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD 312
LDD+F+ YDYI + GAGVADLVE VS+LS LSKLARENNTA+KTVEADRLHTMFLAMAD
Sbjct: 281 LDDSFMCYDYILGSVGAGVADLVEEVSQLSHLSKLARENNTANKTVEADRLHTMFLAMAD 340
Query: 313 ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKH 372
RAVL+KLADRLHNMMTLDALPL KR RFAKET+EIFVPLANRLGI +WK QLENLCFKH
Sbjct: 341 TRAVLVKLADRLHNMMTLDALPLTKRLRFAKETMEIFVPLANRLGILSWKEQLENLCFKH 400
Query: 373 LNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
L+P++H ELSSKLV+ FD +TSAIEKL+QALK++ IS+ +L GR+KSLYSI+ KML+K
Sbjct: 401 LHPEEHKELSSKLVDSFDSERITSAIEKLDQALKNEGISYHLLSGRNKSLYSIYLKMLRK 460
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
KLTMDEIHDI+G+RLIV+NEEDC +ALR+VHQLW+EVPG+ KDYI+RPKFNGY+SLHTVV
Sbjct: 461 KLTMDEIHDIHGIRLIVKNEEDCQKALRIVHQLWSEVPGRCKDYISRPKFNGYRSLHTVV 520
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 552
GE + LEVQIRTKEMHLQAEFG AAHWRYKEGD ++S FV+QMVEWARWV+TWQC +M
Sbjct: 521 VGEDMAHLEVQIRTKEMHLQAEFGIAAHWRYKEGDSEYSPFVVQMVEWARWVVTWQCLSM 580
Query: 553 SKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQC-SHDGPVFVIMIENDKMSVQEFPTSS 611
SKD S V + DSI+PPC FPSH++ CP+SYK QC DGPVFVI IENDKMSVQEFP +S
Sbjct: 581 SKDGSSVDSADSIRPPCKFPSHSEGCPYSYKTQCDGQDGPVFVITIENDKMSVQEFPANS 640
Query: 612 TVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSL 671
T+ +L+ER GRGS+RW+ +GFP+KE+LRPR+NHK V DP CKLKMGDVVELTP IPDKSL
Sbjct: 641 TITNLMERCGRGSARWTSHGFPMKEDLRPRVNHKRVNDPTCKLKMGDVVELTPTIPDKSL 700
Query: 672 TEYREEIQ----RMYERGLAVSNTGPA 694
TEYREEIQ RMY+RG+ VSN+GP+
Sbjct: 701 TEYREEIQRMYDRMYDRGITVSNSGPS 727
>gi|15231772|ref|NP_188021.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
gi|11994378|dbj|BAB02337.1| unnamed protein product [Arabidopsis thaliana]
gi|332641938|gb|AEE75459.1| RelA-SpoT like protein RSH2 [Arabidopsis thaliana]
Length = 709
Score = 955 bits (2468), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/732 (69%), Positives = 569/732 (77%), Gaps = 70/732 (9%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASPPSSVCS HQI+ D DL SRSS+++SS A++P QK +GGLS LFSS
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSSSMASSP--QKPIVGGLSSLFSS 59
Query: 68 S-------------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QS 107
+ S + RS++LK+LS S + YSP+K +S +RD QS
Sbjct: 60 ASVKSSSSSSCSYSTGVDEFSSLRYDRSDDLKDLSFSSSFGYSPAKFV---NSFRRDHQS 116
Query: 108 PVSVFQGPVSCS-------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHN 148
P+SV GPVSCS G+SGLFNGFVR ALGSCVDY+
Sbjct: 117 PISVLHGPVSCSCSPPMRMSRDRNLDGSFRLGASGLFNGFVRKALGSCVDYE-------- 168
Query: 149 GDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
GS + L+DELTF ME + ++ YA++ L AQL+HKIF ++ VIKAFYEA
Sbjct: 169 ------FGSDSVLVDELTFPMEVDTIK----PYARDLLRRAQLRHKIFNDESVIKAFYEA 218
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQMRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FG
Sbjct: 219 EKAHRGQMRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFG 278
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
AGVADLVEGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM
Sbjct: 279 AGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMK 338
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TL AL K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L +
Sbjct: 339 TLYALSPVKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDS 398
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FDEAM+TSAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLI
Sbjct: 399 FDEAMITSAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLI 458
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
V+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+E
Sbjct: 459 VDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQE 518
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAEFGFAAHWRYKEG C++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPP
Sbjct: 519 MHLQAEFGFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPP 578
Query: 569 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 628
C FPSH++DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRWS
Sbjct: 579 CKFPSHSEDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRWS 638
Query: 629 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAV 688
YG P KEELRPRLN V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA
Sbjct: 639 MYGIPAKEELRPRLNQIPVSDLKWKLKMGDVVELTPTIPDESLTEYREEIQRMYDRGLAF 698
Query: 689 SNTGPAVTSMVG 700
S G +MVG
Sbjct: 699 SRPG----TMVG 706
>gi|28268682|dbj|BAC56909.1| RelA homolog [Suaeda japonica]
Length = 708
Score = 949 bits (2452), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/737 (66%), Positives = 573/737 (77%), Gaps = 66/737 (8%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTT-YDFDLNSRSSASTSSTAAAPSSQKQTIGG 60
MAV TIALYASPPSSVCS H IN+H+T YDFDL S S STSS +++ +SQ+ IGG
Sbjct: 1 MAVSTIALYASPPSSVCSTPHPCSINSHSTSYDFDL-SGRSPSTSSQSSSSTSQRPIIGG 59
Query: 61 LSCLFSSSSEMGSY----------RSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QSPV 109
LSCL SS + + LSSSF Y S SSSLKRD QSPV
Sbjct: 60 LSCLLKHSSSLATNDDFQKVGIDDHHHHYCNLSSSFRY----SNCSSLSSSLKRDIQSPV 115
Query: 110 SVFQGPVSC---------------------SGSSGLFNGFVRNALGSCVDYDSSSFRVHN 148
SV QGPVS + ++ L NGFVRN+LGSC+D+D
Sbjct: 116 SVLQGPVSVSSSCNSVASGSFSGSNSFRVNNTTNLLLNGFVRNSLGSCLDHD-------- 167
Query: 149 GDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
++ELTFNMED+ V G+ +E LA+AQ++HKIF + FVIKAFYEA
Sbjct: 168 -------------VEELTFNMEDHFVFGDA---VEELLASAQIRHKIFYDQFVIKAFYEA 211
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQ+RASG PYL HC+ETA+LLA+IGAN+TVVAAGLLHDT+DD+F++YDYI FG
Sbjct: 212 EKAHRGQVRASGHPYLHHCMETAVLLASIGANATVVAAGLLHDTIDDSFVTYDYILNIFG 271
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
+GVADLV GVSKLS LSKLARENNTASKT+EADRLHTMFLAMADARAVLIKLADRLHNMM
Sbjct: 272 SGVADLVNGVSKLSHLSKLARENNTASKTIEADRLHTMFLAMADARAVLIKLADRLHNMM 331
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TLDALP K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHL P+Q+ ELSSKLV+
Sbjct: 332 TLDALPSHKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLYPNQYDELSSKLVKS 391
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FD+A + SAI+KLE+ LKD+++S+ L GRHKSLYSIHCKM KKKLTMD+IHDI+GLRLI
Sbjct: 392 FDQARIQSAIDKLEEGLKDEDLSYHDLSGRHKSLYSIHCKMSKKKLTMDQIHDIHGLRLI 451
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
VENE+DC++AL+VVHQLW+EVPGK KDYI PK NGYQSLHTVV GEG+VPLEVQIRTKE
Sbjct: 452 VENEDDCFRALKVVHQLWSEVPGKFKDYIHCPKCNGYQSLHTVVVGEGMVPLEVQIRTKE 511
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAE+GFAAHWRYKEG+ +HSSFVLQMVEWARWV+ WQCE M+KDRS G DS+K P
Sbjct: 512 MHLQAEYGFAAHWRYKEGESKHSSFVLQMVEWARWVVNWQCETMNKDRSSFGYVDSLKSP 571
Query: 569 CTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWS 628
C FP+H++ CP+SY PQ +HDGPVFVI+IEN+KMSV+EFP +ST+MDLLE G GS RW+
Sbjct: 572 CKFPTHSEGCPYSYNPQPNHDGPVFVILIENEKMSVKEFPLNSTMMDLLEATGHGSPRWT 631
Query: 629 PYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAV 688
+GFP+KE+LRPRLNH V DP CKLKMGDV+ELTPA+PDKSL EYREEIQRMY RGL+V
Sbjct: 632 THGFPVKEDLRPRLNHFPVSDPTCKLKMGDVIELTPALPDKSLIEYREEIQRMYNRGLSV 691
Query: 689 SNTGPAV--TSMVGSRS 703
S PA TS+ G RS
Sbjct: 692 STPAPAATNTSVAGWRS 708
>gi|297742998|emb|CBI35865.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 934 bits (2415), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 441/535 (82%), Positives = 481/535 (89%)
Query: 169 MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 228
MEDN + N E + K+ L AQL+HKIF EDFV+KAFYEAERAHRGQMRASGDPYL HCV
Sbjct: 1 MEDNFPDSNSEPHVKDLLLGAQLRHKIFSEDFVVKAFYEAERAHRGQMRASGDPYLQHCV 60
Query: 229 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 288
ETA+LLA IGANSTVV +GLLHDTLDD+F+ YD IF TFGAGVADLVEGVSKLSQLSKLA
Sbjct: 61 ETAVLLAKIGANSTVVVSGLLHDTLDDSFMGYDDIFGTFGAGVADLVEGVSKLSQLSKLA 120
Query: 289 RENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
R+NNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL K+QRFAKETLEI
Sbjct: 121 RDNNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLGKQQRFAKETLEI 180
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDK 408
FVPLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+TSA EKLE ALKD+
Sbjct: 181 FVPLANRLGISTWKEQLENLCFKHLNPDQHKELSSKLVKSFDEAMITSAKEKLEPALKDE 240
Query: 409 NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAE 468
IS+ VL GRHKSLYSI+CKMLKK +TMDEIHDI+GLRLIVENEEDCY+AL VVH+LW+E
Sbjct: 241 AISYHVLSGRHKSLYSIYCKMLKKNMTMDEIHDIHGLRLIVENEEDCYKALGVVHRLWSE 300
Query: 469 VPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC 528
VPG+ KDYI KFNGY+SLHTVV GEG+VPLEVQIRT+EMHLQAE+GFAAHWRYKEGDC
Sbjct: 301 VPGRFKDYIKHSKFNGYRSLHTVVRGEGMVPLEVQIRTREMHLQAEYGFAAHWRYKEGDC 360
Query: 529 QHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSH 588
HSSFVLQMVEWARWV+TW CE MSKD+S VG +SIKPPC FPSH+D CPFSYKP CS
Sbjct: 361 THSSFVLQMVEWARWVVTWHCETMSKDQSPVGYDNSIKPPCKFPSHSDGCPFSYKPDCSQ 420
Query: 589 DGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVG 648
DGPVFVIM+ENDKMSVQE P +ST+MDLLER GRGSSRW+PYGFP+KEELRPRLNH+AV
Sbjct: 421 DGPVFVIMLENDKMSVQECPANSTIMDLLERTGRGSSRWTPYGFPIKEELRPRLNHEAVN 480
Query: 649 DPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSNTGPAVTSMVGSRS 703
DP CKLKMGDVVELTPAIPDKSL YREEIQRMYERG++VS+ A +SMVG RS
Sbjct: 481 DPTCKLKMGDVVELTPAIPDKSLIVYREEIQRMYERGVSVSSKWSAASSMVGWRS 535
>gi|7141306|gb|AAF37282.1|AF225703_1 RSH2 [Arabidopsis thaliana]
Length = 710
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/733 (68%), Positives = 562/733 (76%), Gaps = 71/733 (9%)
Query: 8 TIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSCLFSS 67
TIALYASPPSSVCS HQI+ D DL SRSS+++SS A++P QK +GGLS LFSS
Sbjct: 6 TIALYASPPSSVCSTPHQISC----DLDLTSRSSSTSSSMASSP--QKPIVGGLSSLFSS 59
Query: 68 S-------------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRD-QS 107
+ S + RS++LK+LS S + YSP+K +S +RD QS
Sbjct: 60 ASVKSSSSSSCSYSTAVDEFSSLRYDRSDDLKDLSFSSSFGYSPAKFV---NSFRRDHQS 116
Query: 108 PVSVFQGPVSCS-------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHN 148
P+SV GPVSCS G+S LFNGFVR ALGSCVDY+
Sbjct: 117 PISVLHGPVSCSCSPPMRMSRDRNLDGSFRLGASRLFNGFVRKALGSCVDYE-------- 168
Query: 149 GDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
+GS + L+DELTF ME + ++ YA++ L AQL+HKIF ++ VIKAFYEA
Sbjct: 169 ------LGSDSGLVDELTFPMEVDTIK----PYARDLLRRAQLRHKIFNDESVIKAFYEA 218
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQMRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FG
Sbjct: 219 EKAHRGQMRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTVDDSFMSYDYILRNFG 278
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
AGVADLVEGVSKLSQLSKLARENNTA KTVEADRLH MFLAMADARAVLIKLADRLHNM
Sbjct: 279 AGVADLVEGVSKLSQLSKLARENNTACKTVEADRLHPMFLAMADARAVLIKLADRLHNMK 338
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
TL AL K+QRFAKETLEIF PLAN LGISTWKVQLENLCFKHL P+QH E+S+ L +
Sbjct: 339 TLYALSPVKQQRFAKETLEIFAPLANCLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDS 398
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FDEAM+TSAIEKL+QALK IS+ VLCGRHKSLYSI+ KMLKKKLT+DEIHDI+GLRLI
Sbjct: 399 FDEAMITSAIEKLDQALKKAGISYHVLCGRHKSLYSIYSKMLKKKLTVDEIHDIHGLRLI 458
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
V+NE DCY+AL VVH LW+EVPGK+KDYIT PKFNGYQSLHTVV G VPLEVQIRT+E
Sbjct: 459 VDNEGDCYKALGVVHSLWSEVPGKLKDYITHPKFNGYQSLHTVVMDNGTVPLEVQIRTQE 518
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPP 568
MHLQAEFGFAAHWRYKEG C++SSFVLQMVEWARWV+TW CEAMSKDRS + + DSIKPP
Sbjct: 519 MHLQAEFGFAAHWRYKEGGCKYSSFVLQMVEWARWVVTWHCEAMSKDRSSISSSDSIKPP 578
Query: 569 C-TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 627
F +DCP SYKP S DGPV+VI+IENDKMSVQEFP SSTV DLL RAG GSSRW
Sbjct: 579 LQVFRLTLEDCPASYKPNSSQDGPVYVIVIENDKMSVQEFPASSTVSDLLSRAGPGSSRW 638
Query: 628 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLA 687
S YG P KEELRPRLN V D + KLKMGDVVELTP IPD+SLTEYREEIQRMY+RGLA
Sbjct: 639 SMYGIPAKEELRPRLNQIPVSDLKWKLKMGDVVELTPKIPDESLTEYREEIQRMYDRGLA 698
Query: 688 VSNTGPAVTSMVG 700
S G +MVG
Sbjct: 699 FSRPG----TMVG 707
>gi|347730539|gb|AEP20477.1| RelA/SpoT-like protein [Quercus suber]
Length = 506
Score = 901 bits (2328), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/509 (82%), Positives = 467/509 (91%), Gaps = 3/509 (0%)
Query: 195 IFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
IF EDFV+KAFYEAE+AHRGQMRASGDPYL HCVETA++LA IGANSTVVAAGLLHDTLD
Sbjct: 1 IFCEDFVVKAFYEAEKAHRGQMRASGDPYLQHCVETAVMLALIGANSTVVAAGLLHDTLD 60
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADAR 314
D+F++YDY+F TFGAGVADLVEGVSKLS LSKLAR+NNTA+KTVEADRLHTMFLAMADAR
Sbjct: 61 DSFMNYDYVFGTFGAGVADLVEGVSKLSHLSKLARDNNTANKTVEADRLHTMFLAMADAR 120
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
AVLIKLADRLHNMMTLDALP K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHL+
Sbjct: 121 AVLIKLADRLHNMMTLDALPPAKQQRFAKETLEIFAPLANRLGISSWKDQLENLCFKHLH 180
Query: 375 PDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
PDQH ELSSKLVE FDEAM+TSA EKL+QALK K++S+ L GRHKSLYSI+ KMLKKKL
Sbjct: 181 PDQHEELSSKLVESFDEAMITSATEKLKQALKAKSVSYQDLSGRHKSLYSIYSKMLKKKL 240
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
TMDEIHDI+GLRLIV+NEEDCY+ALRVVHQLW EVPGK+KDYI+ PKFNGY+SLHTVV
Sbjct: 241 TMDEIHDIHGLRLIVDNEEDCYKALRVVHQLWPEVPGKLKDYISHPKFNGYRSLHTVVMD 300
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
EG+VPLEVQIRT+EMHLQAEFGFAAHWRYKEGDC+H SFVLQMVEWARWV+T QCE M+
Sbjct: 301 EGMVPLEVQIRTREMHLQAEFGFAAHWRYKEGDCKHPSFVLQMVEWARWVVTCQCETMN- 359
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
S + DSI+PPCTFPSH++DCP+SYKP C DGPVFVIMIENDKMSVQEFP +ST+M
Sbjct: 360 --SSIAYADSIRPPCTFPSHSEDCPYSYKPHCGQDGPVFVIMIENDKMSVQEFPANSTIM 417
Query: 615 DLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEY 674
DLLER+GRGSSRW+PYGFPLKEELRPRLNH+ V DP CKLKMGDV+ELTPAI DKSLTEY
Sbjct: 418 DLLERSGRGSSRWTPYGFPLKEELRPRLNHQPVNDPMCKLKMGDVLELTPAISDKSLTEY 477
Query: 675 REEIQRMYERGLAVSNTGPAVTSMVGSRS 703
REEIQRMY+RGL VS++GPA +S+VG RS
Sbjct: 478 REEIQRMYDRGLTVSSSGPAASSIVGWRS 506
>gi|15822693|gb|AAL03950.1| relA/spoT-like protein RSH2 [Nicotiana tabacum]
Length = 643
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 451/634 (71%), Positives = 518/634 (81%), Gaps = 37/634 (5%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAVPTIALYASPPSSVCS + QIN+H +YDFDLN RSS+S+S+++++ K +GGL
Sbjct: 1 MAVPTIALYASPPSSVCSTPYPCQINSHGSYDFDLNGRSSSSSSTSSSS---GKSFVGGL 57
Query: 62 SCLFSSSSEMGSYRS--EELKELSSSFG-YAYSPSKLCGSSSSLKRDQSPVSVFQGPVSC 118
S LFSS + +Y + E+L L G S + SSSLKRDQSPVSVFQGP S
Sbjct: 58 SSLFSSPTVKANYSTGTEDLGSLWHDRGDELSSSFRCSSLSSSLKRDQSPVSVFQGPAST 117
Query: 119 S------------------------GSSGLFNGFVRNALGSCVDYDSSSFRVHNGDAVLN 154
S G+ GLFNGFVR+ALGSCVD+D ++FRV + D+
Sbjct: 118 SSSGIGSCSRSPPRRIAGDVGSIRSGTGGLFNGFVRHALGSCVDHDPTTFRVLDVDS--- 174
Query: 155 VGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRG 214
S+ L+DELTFNME+ +E N E YAK+ L NAQ +HKIF +DFVIKAFYEAE+AHRG
Sbjct: 175 --PSSGLLDELTFNMEEGFLESNSEPYAKDLLLNAQSRHKIFCDDFVIKAFYEAEKAHRG 232
Query: 215 QMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADL 274
Q+RASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD F++YDYIFRT GAGVADL
Sbjct: 233 QVRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDTFMTYDYIFRTLGAGVADL 292
Query: 275 VEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP 334
VEGVSKLSQLSKLAR+ NTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP
Sbjct: 293 VEGVSKLSQLSKLARDFNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALP 352
Query: 335 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMV 394
L K+QRFAKETLEIF PLANRLGISTWK QLENLCFKHLNPDQH ELSSKLV+ FDEAM+
Sbjct: 353 LAKQQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPDQHNELSSKLVKSFDEAMI 412
Query: 395 TSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEED 454
TS++ KLEQALKD ++S+ VL GRHKSLYSI+CKMLKKKL MDE+HDI+GLRLIVEN+ED
Sbjct: 413 TSSVGKLEQALKDDSVSYHVLSGRHKSLYSIYCKMLKKKLNMDEVHDIHGLRLIVENKED 472
Query: 455 CYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAE 514
CY+ALRVVHQLW+EVPG+ KDYI PKFNGYQSLHTVV GEG+VPLEVQIRTKEMHLQAE
Sbjct: 473 CYKALRVVHQLWSEVPGRYKDYIANPKFNGYQSLHTVVLGEGMVPLEVQIRTKEMHLQAE 532
Query: 515 FGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSH 574
+GFAAHWRYKEG C+HSSFV QMVEWARWV+TWQCE M++D+S VG+ +SI+PPC FP+H
Sbjct: 533 YGFAAHWRYKEGACKHSSFVNQMVEWARWVVTWQCETMNRDQSSVGHTESIQPPCKFPAH 592
Query: 575 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFP 608
++DCPFS KP C DGPVF+IMI+NDK+ P
Sbjct: 593 SEDCPFSCKPNCGTDGPVFIIMIDNDKIVCARIP 626
>gi|115476746|ref|NP_001061969.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|33354141|dbj|BAC81140.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|42408400|dbj|BAD09583.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
gi|113623938|dbj|BAF23883.1| Os08g0457600 [Oryza sativa Japonica Group]
gi|215694336|dbj|BAG89329.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704598|dbj|BAG94226.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201251|gb|EEC83678.1| hypothetical protein OsI_29472 [Oryza sativa Indica Group]
gi|222640676|gb|EEE68808.1| hypothetical protein OsJ_27564 [Oryza sativa Japonica Group]
Length = 718
Score = 872 bits (2252), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/734 (61%), Positives = 546/734 (74%), Gaps = 60/734 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTI-GGLS 62
M+VP IA+Y SPP +V +++ + S A+ + + A S + Q I GGLS
Sbjct: 1 MSVPAIAVYTSPPGAVYTSSSSSELEASSR---GSAPCATAAPPSPASSHRHQAIAGGLS 57
Query: 63 CLFSSSS----------EMGSYRSEELKELSS------SFGYAYSPSKLCGSSSSLK-RD 105
CLFSS + E+G+ + E ++ GY+Y SS K RD
Sbjct: 58 CLFSSPTAAPRAAAAQDELGALWHDRSGEATAVGGGGGGGGYSYP-----QPSSPFKWRD 112
Query: 106 ---QSPVSVFQGP-------------VSCSGSSGLFNGFVRNALGSCVDYDSSSFRVHNG 149
SPV +F P ++ LF+ FVRNALGSCVDY
Sbjct: 113 MLHHSPVPLFHSPASSPASRSPSASWLAGRERERLFSSFVRNALGSCVDYAPV------- 165
Query: 150 DAVLNVGSSAAL---IDELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFREDFVIKA 204
A L +G SAA+ EL F +++++ E + E YA++ LA AQ +H+IF ++ V+KA
Sbjct: 166 -AALPLGVSAAVGVGAGELAFELDEHLSEAEPSCEPYARDLLAGAQARHRIFHDELVVKA 224
Query: 205 FYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIF 264
F+EAERAHRGQ RASGDPYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD IF
Sbjct: 225 FFEAERAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFMDYDQIF 284
Query: 265 RTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRL 324
R FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLADRL
Sbjct: 285 RMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRL 344
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNM T++ALPL K+QRFAKET+EIFVPLANRLGI++WK QLEN+CFKHLNP++H ELSSK
Sbjct: 345 HNMKTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENICFKHLNPEEHKELSSK 404
Query: 385 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 444
LV FDEA++TS ++KL++ L+D+ IS+ L GRHKSLYSI+ KM+KK LTMD++HDI+G
Sbjct: 405 LVISFDEALLTSTLDKLDKGLRDEGISYHSLSGRHKSLYSIYSKMIKKNLTMDDVHDIHG 464
Query: 445 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQI 504
LRL+V+ E+DCYQAL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P EVQI
Sbjct: 465 LRLVVDTEQDCYQALDIVHKLWPRVAGRFKDYILHPKLNGYRSLHTVIMCEGIHPFEVQI 524
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSC-VGNGD 563
RTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAMSK+RS +G D
Sbjct: 525 RTKEMHLQAEYGFAAHWRYKEGGCKH-SFVLQMVEWARWVLTWQCEAMSKERSSGLGRSD 583
Query: 564 SIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRG 623
+I+PPC FPSH++DCP+SY QC+HDGP+FVIM+E+DKMSVQE P +STV+DL+ER G
Sbjct: 584 AIRPPCPFPSHSEDCPYSYTRQCNHDGPIFVIMLEHDKMSVQELPANSTVVDLMERVGAN 643
Query: 624 SSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYE 683
S R SPY FPLKEELRPR+NHK + DP KL MGDVVELTPA+P KSLTEYREEIQRMYE
Sbjct: 644 SPRCSPYSFPLKEELRPRVNHKPISDPNRKLCMGDVVELTPALPHKSLTEYREEIQRMYE 703
Query: 684 RG---LAVSNTGPA 694
RG LA + GPA
Sbjct: 704 RGGFALATTRDGPA 717
>gi|255560615|ref|XP_002521321.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
gi|223539399|gb|EEF40989.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, putative
[Ricinus communis]
Length = 608
Score = 871 bits (2250), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/489 (84%), Positives = 444/489 (90%), Gaps = 1/489 (0%)
Query: 216 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 275
MRASGDPYL HCVETA+LLA IGANSTVVAAGLLHDTLDD+FLSYDYIFRTFGAGVADLV
Sbjct: 120 MRASGDPYLQHCVETAVLLAMIGANSTVVAAGLLHDTLDDSFLSYDYIFRTFGAGVADLV 179
Query: 276 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 335
EGVSKLS LSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TLDALPL
Sbjct: 180 EGVSKLSHLSKLARENNTADKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLDALPL 239
Query: 336 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 395
K+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPD+H +L+S+LVE FDEA+VT
Sbjct: 240 VKQQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDKHRDLASRLVESFDEAVVT 299
Query: 396 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 455
SA EKLEQALKD +IS+ VL GRHKSLYSI+CKMLKKKL MDEIHDI+GLRLIVENEEDC
Sbjct: 300 SATEKLEQALKDDDISYHVLSGRHKSLYSIYCKMLKKKLNMDEIHDIHGLRLIVENEEDC 359
Query: 456 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 515
Y+ALRVVHQLW+EVPGK KDYI+RPKFNGYQSLHTVV EG+VPLEVQIRTKEMHLQAE
Sbjct: 360 YRALRVVHQLWSEVPGKFKDYISRPKFNGYQSLHTVVRAEGMVPLEVQIRTKEMHLQAEC 419
Query: 516 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHA 575
GFAAHWRYKEGDC+HSSFVLQMVEWARW++TWQCE MSK RS VG+ DSIK PC FP+H+
Sbjct: 420 GFAAHWRYKEGDCKHSSFVLQMVEWARWIVTWQCETMSKYRSSVGHADSIKAPCAFPTHS 479
Query: 576 DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK 635
DDCPFSYKP DGPVF+IMIENDKMSVQEFP +ST+MDLL RAGRGSSRWSPYGFP+K
Sbjct: 480 DDCPFSYKPHRGQDGPVFIIMIENDKMSVQEFPANSTMMDLLVRAGRGSSRWSPYGFPVK 539
Query: 636 EELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGL-AVSNTGPA 694
EELRPRLNH + D CKLKMGDVVELTPAIP+KSLTE REEIQRMY+RGL VS+T A
Sbjct: 540 EELRPRLNHMPLSDATCKLKMGDVVELTPAIPNKSLTECREEIQRMYDRGLNTVSSTATA 599
Query: 695 VTSMVGSRS 703
+ M G RS
Sbjct: 600 ASGMAGWRS 608
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 20/124 (16%)
Query: 4 MAVPTIALYASPPSSVCSATH--QINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGL 61
MAV TIALYASPPSSVCSA H QIN+H +YDFDLNSRSS++ SS+A++ +QK +GGL
Sbjct: 1 MAVSTIALYASPPSSVCSAPHPCQINSHGSYDFDLNSRSSSTASSSASS--TQKSIVGGL 58
Query: 62 SCLFSSSS-----------EMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
SCLFSSSS E+GS R +ELKELSSSF YSPSK G S +KRDQS
Sbjct: 59 SCLFSSSSVKHASFSGDREELGSLWHDRGDELKELSSSF--RYSPSKYLGGGSYIKRDQS 116
Query: 108 PVSV 111
P+S+
Sbjct: 117 PISM 120
>gi|357148012|ref|XP_003574588.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 711
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/730 (60%), Positives = 548/730 (75%), Gaps = 59/730 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPS---SQKQTI-- 58
M+VPT+A+Y SPP + +++ + + +SR SA + TAA PS S + +
Sbjct: 1 MSVPTMAVYTSPPGGLYASS---------ELETSSRGSAPCA-TAAPPSPASSHRHSSFS 50
Query: 59 GGLSCLFSSSSEMGSYRSEELKELSSSFGYAYSPSKLCG---------SSSSLK-RDQ-- 106
GGLSCLFSS + + RS L EL + + + G SSSLK RD
Sbjct: 51 GGLSCLFSSPT--AAPRSSALDELGALWHDRSDEPAVAGRGGGYSCPQPSSSLKWRDHLH 108
Query: 107 -SPVSVFQGP-------------VSCSGSSGLFNGFVRNALGSCVDYDSSSFRVHNGDAV 152
SPVS+F P ++ LF+ FVRNALGSCVDY +
Sbjct: 109 HSPVSLFHSPASSPASRSPSASWLASRERERLFSSFVRNALGSCVDYAPVT------SPA 162
Query: 153 LNVGSSAALID--ELTFNMEDNI--VEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEA 208
L V ++AA +D EL F +++N+ E + E YA++ LA AQ +H+IF ++ V+KAF+EA
Sbjct: 163 LGV-TAAAGVDAAELAFELDENLSGAEPSCEPYARDLLAGAQARHRIFHDELVVKAFFEA 221
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E+AHRGQ RASGDPYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD+IFR FG
Sbjct: 222 EKAHRGQTRASGDPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFMDYDHIFRMFG 281
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
AGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLADRLHNM
Sbjct: 282 AGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLADRLHNMK 341
Query: 329 TLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC 388
T++ALP K+QRFAKET+EIFVPLANRLGI++WK QLEN+CFKHLNP++H ELSSKLV
Sbjct: 342 TIEALPFVKQQRFAKETMEIFVPLANRLGIASWKEQLENICFKHLNPEEHKELSSKLVIS 401
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
FDEA++TS ++KL++ L+D+ IS+ + GRHKSLYSI+ KM+KK LTMD++HDI+GLRL+
Sbjct: 402 FDEALLTSTLDKLDKGLRDEGISYHSVSGRHKSLYSIYSKMIKKNLTMDDVHDIHGLRLV 461
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
VE E+DCY+AL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P EVQIRTKE
Sbjct: 462 VETEKDCYRALDIVHKLWPGVSGRFKDYILHPKVNGYRSLHTVILCEGVHPFEVQIRTKE 521
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKP 567
MHLQAEFGFAAHWRYKEG C+H +FVLQMVEWARWVLTWQCEAMSK+R S + + DS+K
Sbjct: 522 MHLQAEFGFAAHWRYKEGGCRH-AFVLQMVEWARWVLTWQCEAMSKERPSGLVSSDSVKS 580
Query: 568 PCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW 627
C FP H+++CP+SY QC+HDGP+FVIM+E+DKMSVQE P +ST+++L+ER S RW
Sbjct: 581 SCPFPLHSEECPYSYTRQCNHDGPIFVIMLEHDKMSVQELPANSTIVNLMERVSASSPRW 640
Query: 628 SPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG-- 685
SPY FPLKEELRPR+NH+ + DP L MGDVVELTPA+P KSLTEYREEIQRMYERG
Sbjct: 641 SPYSFPLKEELRPRVNHQPISDPNRTLCMGDVVELTPALPHKSLTEYREEIQRMYERGGF 700
Query: 686 -LAVSNTGPA 694
LA + PA
Sbjct: 701 ALATTRGAPA 710
>gi|357158631|ref|XP_003578190.1| PREDICTED: GTP pyrophosphokinase-like [Brachypodium distachyon]
Length = 708
Score = 855 bits (2210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 432/732 (59%), Positives = 537/732 (73%), Gaps = 62/732 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ----TIG 59
M++ I+LY SPP +V S+ +FD + R S+ ++ P G
Sbjct: 1 MSLSAISLYTSPPGAVYSS----------EFDPSCRGSSPCTTATPPPPGTSHRPSAVAG 50
Query: 60 GLSCLFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQS 107
GLSCLFSS E+G+ + +LS Y++S S L S
Sbjct: 51 GLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGSYSHSSSPLKRRDLHHHHHHS 110
Query: 108 PVSVFQGP-------------VSCSGSSGLFNGFVRNALGSCVDY-DSSSFRVHNGDAVL 153
PVSVFQGP ++ LF+GFVRNALGSC+DY ++S R G
Sbjct: 111 PVSVFQGPSSSPASRSPPASWLTGRERERLFSGFVRNALGSCIDYVPATSPRPELGGG-- 168
Query: 154 NVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIKAFYEAERA 211
EL F +++N+ E + E YA+E LA AQ +H+IF E+ V++AF+EAE+A
Sbjct: 169 ----------ELAFELDENLPEASPACEPYARELLAGAQARHRIFHEELVVRAFFEAEKA 218
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDP+L HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGV
Sbjct: 219 HHGQTRASGDPFLQHCVETAVLLAKIGANSTVVSAGLLHDTIDDSFVDYDHIFHMFGAGV 278
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLD 331
ADLVEGVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR+HNM TL+
Sbjct: 279 ADLVEGVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADRVHNMKTLE 338
Query: 332 ALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE 391
ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP+++TELSSKL E FDE
Sbjct: 339 ALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEYTELSSKLTETFDE 398
Query: 392 AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVEN 451
A++TSA++ L++ L++ +S+ L GRHK+LYS++ KMLKK LTMDE+HDI+GLRL+V+
Sbjct: 399 ALITSAVDTLDEGLREAGVSYRNLSGRHKNLYSVYSKMLKKNLTMDEVHDIHGLRLVVDK 458
Query: 452 EEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHL 511
EEDCYQAL VVH+LW +V G+ KDYI+RPK NGY+SLHTVV EG+ P EVQIRTKEMHL
Sbjct: 459 EEDCYQALEVVHKLWPQVTGRFKDYISRPKLNGYRSLHTVVLSEGVHPFEVQIRTKEMHL 518
Query: 512 QAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCT 570
QAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+ SC N D+I+PPC
Sbjct: 519 QAEYGFAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEAMNKEHSSCQVNSDAIRPPCP 577
Query: 571 FPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPY 630
FP H+++C +SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL++R G S RWSPY
Sbjct: 578 FPLHSEECAYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMDRVGANSPRWSPY 637
Query: 631 GFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERGLAVSN 690
P+KE+LRP++NH+ + + R L MGDVVELTPA+PDKSLTEYREEIQRMY+ G
Sbjct: 638 SVPMKEDLRPKVNHEPISNLRRPLGMGDVVELTPALPDKSLTEYREEIQRMYDCG----- 692
Query: 691 TGPAVTSMVGSR 702
G A+ + GSR
Sbjct: 693 -GFALAATRGSR 703
>gi|51535999|dbj|BAD38079.1| putative plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 708
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/727 (60%), Positives = 533/727 (73%), Gaps = 62/727 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ--TIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQ 106
SCLFSS E+G+ RS+E GY+ SP K
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKW--RDLHHHHHH 109
Query: 107 SPVSVFQGPVSCSGSSG----------------LFNGFVRNALGSCVDYDSS-SFRVHNG 149
SPVSVFQGP S +S LF GFVRNALGSCVDY + S R G
Sbjct: 110 SPVSVFQGPSSSPAASRSPPASWLAGRDRDRERLFAGFVRNALGSCVDYAPALSPRSEVG 169
Query: 150 DAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIKAFYE 207
EL F +++N+ E + E A+E LA AQ +H+IF E+ V+K F+E
Sbjct: 170 GG------------ELAFELDENLAEASPACEPCARELLAGAQARHRIFHEELVVKTFFE 217
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
AE+AHRGQ RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF F
Sbjct: 218 AEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMF 277
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM 327
GAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM
Sbjct: 278 GAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNM 337
Query: 328 MTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE 387
TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL +
Sbjct: 338 KTLEALPLGKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTK 397
Query: 388 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 447
FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL
Sbjct: 398 SFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRL 457
Query: 448 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 507
+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTK
Sbjct: 458 VFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTK 517
Query: 508 EMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIK 566
EMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R + +G+ D+I+
Sbjct: 518 EMHLQAEYGFAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERPASLGDSDAIR 576
Query: 567 PPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSR 626
PPC FP H++DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+L++R G + R
Sbjct: 577 PPCPFPMHSEDCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMNLMDRVGTNTPR 636
Query: 627 WSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER-G 685
WSPY P+KE+LRP++NH+ + D KL MGDVVELTPA+P +SL YREEIQRMY+R G
Sbjct: 637 WSPYRIPMKEDLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYREEIQRMYDRGG 696
Query: 686 LAVSNTG 692
A++ G
Sbjct: 697 FALATRG 703
>gi|357514023|ref|XP_003627300.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521322|gb|AET01776.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 682
Score = 852 bits (2202), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/633 (70%), Positives = 508/633 (80%), Gaps = 43/633 (6%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAASTSG--KSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGSSG----------------LFNGFVRNALGS-CVDYDSSSFRVHNGDAVLN 154
FQ PVSCS S G +GFVR+ALGS C+DYDS+ R+ G +
Sbjct: 112 FQCPVSCSSSIGAGTGTVRSGRGSTGGGFLDGFVRSALGSSCLDYDSTGVRLRGGGGEFD 171
Query: 155 VGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKHKIFREDFVIKAFYEAE 209
+ ++DELTFN++D VEG +E YAK+ L NAQL+HKIF E+FVIKAF EAE
Sbjct: 172 GVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAE 231
Query: 210 RAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGA 269
+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGA
Sbjct: 232 KAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGA 291
Query: 270 GVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMT 329
GVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMT
Sbjct: 292 GVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMT 351
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
LDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +
Sbjct: 352 LDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESY 411
Query: 390 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIV 449
D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LKKKLT+D+IHDIYGLRLIV
Sbjct: 412 DDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKKKLTIDDIHDIYGLRLIV 471
Query: 450 ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEM 509
+ EEDCY+AL+VVH+LW+EV GK+KDYI PKFNGYQSLHTVV GEG VPLEVQ+RTK+M
Sbjct: 472 DKEEDCYKALKVVHRLWSEVHGKLKDYIRFPKFNGYQSLHTVVMGEGKVPLEVQVRTKDM 531
Query: 510 HLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPC 569
HLQAEFGFAAHWRYKE CQ SS+VLQMVEWARWV+TWQCEAMSKD + VG DSIKPPC
Sbjct: 532 HLQAEFGFAAHWRYKEDHCQLSSYVLQMVEWARWVVTWQCEAMSKDSTSVGYVDSIKPPC 591
Query: 570 TFPSHADDCPFSYKPQCSHDGPVFVIMIENDKM 602
FPSHAD+CP+SYKP C+ DGPVFVIMIENDK+
Sbjct: 592 KFPSHADNCPYSYKPDCAQDGPVFVIMIENDKV 624
>gi|242044820|ref|XP_002460281.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
gi|241923658|gb|EER96802.1| hypothetical protein SORBIDRAFT_02g025940 [Sorghum bicolor]
Length = 712
Score = 844 bits (2180), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/728 (60%), Positives = 539/728 (74%), Gaps = 61/728 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++P I+LY SPP +V S+ +FD SR S+ +++ A P + +
Sbjct: 1 MSLPAISLYTSPPGAVYSS----------EFDPTSRGSSPSTTAAPPPPAASHRLPSGGG 50
Query: 61 ---LSCLFSSS------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSL 102
LSCLFSS ++G+ RS++L + + Y++S S L
Sbjct: 51 GGGLSCLFSSPAAAAAPPRAPAHDDLGALWHDRSDDLSVVGGGYSYSHSHSSSPLKRRDL 110
Query: 103 KRDQ-SPVSVFQGP-------------VSCSGSSGLFNGFVRNALGSCVDYDSSSFRVHN 148
+ SPVSVFQGP ++ LF GFVRNALGSCVDY S
Sbjct: 111 HHNHHSPVSVFQGPSSSSPSRSPPASWLAARDRDRLFAGFVRNALGSCVDYAPPS----- 165
Query: 149 GDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIKAFY 206
VG+ EL F +++N+ E E YA+E LA+AQ +H+IF E+ V+KAF
Sbjct: 166 -SPRPEVGAG-----ELAFELDENLAEAGPACEPYARELLASAQDRHRIFHEELVVKAFL 219
Query: 207 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 266
EAE+AHRGQ RASG+PYL HCVETA+LLA IGAN+TVV+AGLLHDT+DD+F+ YD+IF
Sbjct: 220 EAEKAHRGQTRASGEPYLQHCVETAVLLAKIGANATVVSAGLLHDTIDDSFIDYDHIFHM 279
Query: 267 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHN 326
FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTM LAMADARAVLIKLADRLHN
Sbjct: 280 FGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTMLLAMADARAVLIKLADRLHN 339
Query: 327 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 386
M TL+AL L K+QRFAKET EIFVPLANRLGI++WK QLENLCFK+LNP+++ ELSSKL
Sbjct: 340 MKTLEALSLVKQQRFAKETKEIFVPLANRLGIASWKDQLENLCFKYLNPEEYKELSSKLT 399
Query: 387 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E FDE ++TSA+ KL++ L+D +S+ L GRHKSLYSIH KMLKK LTM+EIHDI+GLR
Sbjct: 400 ESFDEELITSAVGKLDKGLRDAGVSYHNLSGRHKSLYSIHSKMLKKNLTMEEIHDIHGLR 459
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
L+V+ EDCY+AL VVH+LW V G+ KDYI+RPK NGY+SLHTVV EG+ P EVQIRT
Sbjct: 460 LVVDTVEDCYEALCVVHKLWPRVTGRFKDYISRPKLNGYRSLHTVVMSEGVHPFEVQIRT 519
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSC-VGNGDSI 565
KEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R+ +GN D++
Sbjct: 520 KEMHLQAEYGFAAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERTASLGNDDTV 578
Query: 566 KPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSS 625
+PPC FP H+++CP+SY QC+HDGP+FVI++E+DKMSVQEFP +STVMDL++R G SS
Sbjct: 579 RPPCPFPLHSEECPYSYTRQCNHDGPLFVILLEHDKMSVQEFPANSTVMDLMDRVGANSS 638
Query: 626 RWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER- 684
RWSPY P+KE+LRPR+NH+ + DP KL MGDVVELTPA+P KSL+ YREEIQRMY+R
Sbjct: 639 RWSPYSIPVKEDLRPRVNHEPICDPNRKLSMGDVVELTPALPRKSLSGYREEIQRMYDRG 698
Query: 685 GLAVSNTG 692
G A+S G
Sbjct: 699 GFALSTRG 706
>gi|414870236|tpg|DAA48793.1| TPA: hypothetical protein ZEAMMB73_708443 [Zea mays]
Length = 713
Score = 841 bits (2173), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/732 (60%), Positives = 540/732 (73%), Gaps = 63/732 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQ----TIG 59
M+VP IA+Y SPP +V + + + +SR SA ++ A+ + G
Sbjct: 1 MSVPAIAVYTSPPGAVYAPP---------ELESSSRGSAPCAAAASPSAPSSHRHAAVAG 51
Query: 60 GLSCLFSSSS---------EMGSY---RSEELKELSSSFG---YAYSPSKLCGSSSSLK- 103
GLSCLFSS S E+G+ RS+E ++ FG Y+Y S S S LK
Sbjct: 52 GLSCLFSSPSAAPRATAHEELGALWHDRSDEPPSVAGGFGGGGYSYPQS----SPSPLKL 107
Query: 104 RD---QSPVSVFQGP-------------VSCSGSSGLFNGFVRNALGSCVDYDS-SSFRV 146
RD +SPVS+F P ++ LF+ FVRNALGSC+DY +SF
Sbjct: 108 RDHLHRSPVSLFHTPASSPASRSPSVSWLAGRERERLFSSFVRNALGSCIDYAPVTSF-- 165
Query: 147 HNGDAVLNVGSSAALID--ELTFNMEDNIVEG--NLETYAKEFLANAQLKHKIFREDFVI 202
L V +A +D EL F +++N+ E + E A E LA AQ +H IFR++ V+
Sbjct: 166 -----PLGVRPAATGVDAAELAFELDENLSEAEPSCEPDAHELLAGAQARHHIFRDELVV 220
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF EAERAHRGQ RASGDPYL HCVETA+ LA IGAN+TVV+AGLLHDT+DD+F+ YD+
Sbjct: 221 KAFKEAERAHRGQKRASGDPYLQHCVETAVHLANIGANATVVSAGLLHDTIDDSFMDYDH 280
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLAD 322
IFR FGAGVADLVEGVSKLS LSKLAR+NNTAS+TVEADRLHTMFLAMADARAVLIKLAD
Sbjct: 281 IFRMFGAGVADLVEGVSKLSHLSKLARDNNTASRTVEADRLHTMFLAMADARAVLIKLAD 340
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T++ALPL K+QRFAKET+EIFVPLANRLGI++WK LEN+CFKHLNP++H ELS
Sbjct: 341 RLHNMNTIEALPLVKQQRFAKETMEIFVPLANRLGIASWKDHLENICFKHLNPEEHKELS 400
Query: 383 SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 442
SKL+ FDEA++TS + L+++L+D+ IS+ L GRHKSLYSI+ KM+KK LTMD++HDI
Sbjct: 401 SKLLMSFDEALLTSTLHNLDKSLRDEGISYHSLSGRHKSLYSIYSKMIKKNLTMDDVHDI 460
Query: 443 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 502
+GLRL+VE EEDCY+AL +VH+LW V G+ KDYI PK NGY+SLHTV+ EG+ P E+
Sbjct: 461 HGLRLVVETEEDCYRALDIVHKLWPRVTGRFKDYICHPKLNGYRSLHTVIMCEGVHPFEI 520
Query: 503 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGN 561
QIRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCE +SK+R S + +
Sbjct: 521 QIRTKEMHLQAEYGFAAHWRYKEGGCRH-SFVLQMVEWARWVLTWQCETLSKERPSSLSS 579
Query: 562 GDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAG 621
I+PPC FP H++DC +SY QC+++GP+FVIM+E+DKMSVQE P +STV+DL+ER G
Sbjct: 580 SVGIRPPCPFPLHSEDCSYSYSRQCNYEGPIFVIMLEHDKMSVQELPANSTVVDLMERVG 639
Query: 622 RGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRM 681
S RWSP FPLKEELRPR+NHK + DP KL MGDVVELTPA+PDKSL+EYREEIQRM
Sbjct: 640 ANSPRWSPCSFPLKEELRPRVNHKPISDPNRKLSMGDVVELTPALPDKSLSEYREEIQRM 699
Query: 682 YERGLAVSNTGP 693
YERG T P
Sbjct: 700 YERGGFALATTP 711
>gi|33354143|dbj|BAC81141.1| plastid (p)ppGpp synthase [Oryza sativa Japonica Group]
Length = 728
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/747 (58%), Positives = 533/747 (71%), Gaps = 82/747 (10%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQK--QTIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQ 106
SCLFSS E+G+ RS+E GY+ SP K
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKW--RDLHHHHHH 109
Query: 107 SPVSVFQGPVSCSGSSG----------------LFNGFVRNALGSCVDYDSS-SFRVHNG 149
SPVSVFQGP S +S LF GFVRNALGSCVDY + S R G
Sbjct: 110 SPVSVFQGPSSSPAASRSPPASWLAGRDRDRERLFAGFVRNALGSCVDYAPALSPRSEVG 169
Query: 150 DAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIKAFYE 207
EL F +++N+ E + E A+E LA AQ +H+IF E+ V+K F+E
Sbjct: 170 GG------------ELAFELDENLAEASPACEPCARELLAGAQARHRIFHEELVVKTFFE 217
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV--------------------VAAG 247
AE+AHRGQ RASGDPYL HCVETA+LLA IGANSTV V+AG
Sbjct: 218 AEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVLQHCVETAVLLANIGANSTVVSAG 277
Query: 248 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 307
LLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM
Sbjct: 278 LLHDTIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTML 337
Query: 308 LAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLEN 367
LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLEN
Sbjct: 338 LAMADARAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIASWKDQLEN 397
Query: 368 LCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 427
LCFKHLNP++H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH
Sbjct: 398 LCFKHLNPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHN 457
Query: 428 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQS 487
KMLKK LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY+S
Sbjct: 458 KMLKKNLTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRS 517
Query: 488 LHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTW 547
LHTVV E + P EVQIRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTW
Sbjct: 518 LHTVVMSENVHPFEVQIRTKEMHLQAEYGFAAHWRYKEGTCRH-SFVLQMVEWARWVLTW 576
Query: 548 QCEAMSKDR-SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQE 606
QCEAM+K+R + +G+ D+I+PPC FP H++DCP+SY QC HDGP+FVI++E+DKMSVQE
Sbjct: 577 QCEAMNKERPASLGDSDAIRPPCPFPMHSEDCPYSYTRQCDHDGPIFVILLEHDKMSVQE 636
Query: 607 FPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAI 666
F +STVM+L++R G + RWSPY P+KE+LRP++NH+ + D KL MGDVVELTPA+
Sbjct: 637 FQANSTVMNLMDRVGTNTPRWSPYRIPMKEDLRPKVNHEPISDLNRKLSMGDVVELTPAL 696
Query: 667 PDKSLTEYREEIQRMYER-GLAVSNTG 692
P +SL YREEIQRMY+R G A++ G
Sbjct: 697 PHESLPNYREEIQRMYDRGGFALATRG 723
>gi|125605857|gb|EAZ44893.1| hypothetical protein OsJ_29534 [Oryza sativa Japonica Group]
Length = 1130
Score = 829 bits (2142), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/574 (67%), Positives = 471/574 (82%), Gaps = 18/574 (3%)
Query: 124 LFNGFVRNALGSCVDYDSS-SFRVHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LET 180
LF GFVRNALGSCVDY + S R G EL F +++N+ E + E
Sbjct: 565 LFAGFVRNALGSCVDYAPALSPRSEVGGG------------ELAFELDENLAEASPACEP 612
Query: 181 YAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGAN 240
A+E LA AQ +H+IF E+ V+K F+EAE+AHRGQ RASGDPYL HCVETA+LLA IGAN
Sbjct: 613 CARELLAGAQARHRIFHEELVVKTFFEAEKAHRGQTRASGDPYLQHCVETAVLLANIGAN 672
Query: 241 STVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA 300
STVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVEGVSKLS LSKLAR+NNTAS+ VEA
Sbjct: 673 STVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEGVSKLSHLSKLARDNNTASRIVEA 732
Query: 301 DRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
DRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++
Sbjct: 733 DRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGKQQRFAKETMEIFVPLANRLGIAS 792
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA++KL++ L+D +S+ L GRHK
Sbjct: 793 WKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHK 852
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
SLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+AL VVH+LW +VPG+ KDYI+RP
Sbjct: 853 SLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYRALDVVHELWPQVPGRFKDYISRP 912
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 540
K NGY+SLHTVV E + P EVQIRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEW
Sbjct: 913 KLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYGFAAHWRYKEGTCRH-SFVLQMVEW 971
Query: 541 ARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIEN 599
ARWVLTWQCEAM+K+R + +G+ D+I+PPC FP H++DCP+SY QC HDGP+FVI++E+
Sbjct: 972 ARWVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHSEDCPYSYTRQCDHDGPIFVILLEH 1031
Query: 600 DKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDV 659
DKMSVQEF +STVM+L++R G + RWSPY P+KE+LRP++NH+ + D KL MGDV
Sbjct: 1032 DKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMKEDLRPKVNHEPISDLNRKLSMGDV 1091
Query: 660 VELTPAIPDKSLTEYREEIQRMYER-GLAVSNTG 692
VELTPA+P +SL YREEIQRMY+R G A++ G
Sbjct: 1092 VELTPALPHESLPNYREEIQRMYDRGGFALATRG 1125
>gi|326503772|dbj|BAJ86392.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 818 bits (2114), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/723 (58%), Positives = 525/723 (72%), Gaps = 61/723 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGP--------------VSCSGSSGLFNGFVRNALGSCVDY-DSSSFR 145
SPVSVFQGP ++ LF+GFVRNALGSC+DY ++S R
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSASWLTGRERDRLFSGFVRNALGSCIDYVPATSPR 173
Query: 146 VHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIK 203
G EL F +++N+ + E YA+E LA AQ +H+IF E+ V+K
Sbjct: 174 PEVGGG------------ELAFELDENLAGASPACEPYAQELLAGAQARHRIFHEELVVK 221
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
AF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+I
Sbjct: 222 AFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHI 281
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
F FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR
Sbjct: 282 FHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADR 341
Query: 324 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS 383
+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSS
Sbjct: 342 VHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSS 401
Query: 384 KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 443
K E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+
Sbjct: 402 KFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIH 461
Query: 444 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 503
GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY+SLHTVV +G EVQ
Sbjct: 462 GLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGYRSLHTVVMSDGDHTFEVQ 521
Query: 504 IRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG-NG 562
IRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEA++K+ S
Sbjct: 522 IRTKEMHLQAEYGFAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEALNKEHSSSQVKS 580
Query: 563 DSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 622
D+IKPPC FP H+++CP+SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL+ R G
Sbjct: 581 DAIKPPCPFPLHSEECPYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMHRVGA 640
Query: 623 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMY 682
S RWSPY P+KE+LRP++NH+ + D L MGDVVELTPA+PDKSLTEYREEIQRMY
Sbjct: 641 NSPRWSPYSIPMKEDLRPKVNHEPISDTGRALNMGDVVELTPALPDKSLTEYREEIQRMY 700
Query: 683 ERG 685
+RG
Sbjct: 701 DRG 703
>gi|326505464|dbj|BAJ95403.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 815 bits (2106), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/723 (57%), Positives = 524/723 (72%), Gaps = 61/723 (8%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGP--------------VSCSGSSGLFNGFVRNALGSCVDY-DSSSFR 145
SPVSVFQGP ++ LF+GFVRNALGSC+DY ++S R
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSASWLTGRERDRLFSGFVRNALGSCIDYVPATSPR 173
Query: 146 VHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIK 203
G EL F +++N+ + E YA+E LA AQ + +IF E+ V+K
Sbjct: 174 PEVGGG------------ELAFELDENLAGASPACEPYAQELLAGAQARRRIFHEELVVK 221
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
AF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+I
Sbjct: 222 AFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHI 281
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
F FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR
Sbjct: 282 FHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADR 341
Query: 324 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS 383
+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSS
Sbjct: 342 VHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSS 401
Query: 384 KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 443
K E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+
Sbjct: 402 KFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIH 461
Query: 444 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 503
GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY+SLHTVV +G EVQ
Sbjct: 462 GLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGYRSLHTVVMSDGDHTFEVQ 521
Query: 504 IRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG-NG 562
IRTKEMHLQAE+GFAAHWRYKEG C+H SFVLQMVEWARWVLTWQCEA++K+ S
Sbjct: 522 IRTKEMHLQAEYGFAAHWRYKEGSCRH-SFVLQMVEWARWVLTWQCEALNKEHSSSQVKS 580
Query: 563 DSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGR 622
D+IKPPC FP H+++CP+SY QC+H+GP+FVI++E+DKMSVQEFP STVMDL+ R G
Sbjct: 581 DAIKPPCPFPLHSEECPYSYTRQCNHEGPLFVILLEHDKMSVQEFPAGSTVMDLMHRVGA 640
Query: 623 GSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMY 682
S RWSPY P+KE+LRP++NH+ + D L MGDVVELTPA+PDKSLTEYREEIQRMY
Sbjct: 641 NSPRWSPYSIPMKEDLRPKVNHEPISDTGRALNMGDVVELTPALPDKSLTEYREEIQRMY 700
Query: 683 ERG 685
+RG
Sbjct: 701 DRG 703
>gi|115479395|ref|NP_001063291.1| Os09g0442600 [Oryza sativa Japonica Group]
gi|113631524|dbj|BAF25205.1| Os09g0442600, partial [Oryza sativa Japonica Group]
Length = 491
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/469 (72%), Positives = 408/469 (86%), Gaps = 2/469 (0%)
Query: 218 ASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEG 277
ASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF FGAGVADLVEG
Sbjct: 11 ASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMFGAGVADLVEG 70
Query: 278 VSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCK 337
VSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM TL+ALPL K
Sbjct: 71 VSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNMKTLEALPLGK 130
Query: 338 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 397
+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H +LSSKL + FDE ++TSA
Sbjct: 131 QQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKDLSSKLTKSFDEVLITSA 190
Query: 398 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 457
++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL+ E EEDCY+
Sbjct: 191 VDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRLVFEKEEDCYR 250
Query: 458 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 517
AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTKEMHLQAE+GF
Sbjct: 251 ALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTKEMHLQAEYGF 310
Query: 518 AAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHAD 576
AAHWRYKEG C+H SFVLQMVEWARWVLTWQCEAM+K+R + +G+ D+I+PPC FP H++
Sbjct: 311 AAHWRYKEGTCRH-SFVLQMVEWARWVLTWQCEAMNKERPASLGDSDAIRPPCPFPMHSE 369
Query: 577 DCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKE 636
DCP+SY QC HDGP+FVI++E+DKMSVQEF +STVM+L++R G + RWSPY P+KE
Sbjct: 370 DCPYSYTRQCDHDGPIFVILLEHDKMSVQEFQANSTVMNLMDRVGTNTPRWSPYRIPMKE 429
Query: 637 ELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYERG 685
+LRP++NH+ + D KL MGDVVELTPA+P +SL YREEIQRMY+RG
Sbjct: 430 DLRPKVNHEPISDLNRKLSMGDVVELTPALPHESLPNYREEIQRMYDRG 478
>gi|125563887|gb|EAZ09267.1| hypothetical protein OsI_31540 [Oryza sativa Indica Group]
Length = 533
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 328/554 (59%), Positives = 392/554 (70%), Gaps = 59/554 (10%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQK--QTIGGL 61
M++P I+LY SPP ++ +FD +SR S+ STA +S + GGL
Sbjct: 1 MSLPAISLYTSPPPGAVYSS---------EFDPSSRGSSPPCSTAPPSTSHRPPAAAGGL 51
Query: 62 SCLFSSS------------SEMGSY---RSEELKELSSSFGYAYSPSKLCGSSSSLKRDQ 106
SCLFSS E+G+ RS+E GY+ SP K
Sbjct: 52 SCLFSSPAAAASPPRAPPHDELGALWQDRSDEPAFAGGGGGYSSSPLKW--RDLHHHHHH 109
Query: 107 SPVSVFQGPVSCSGSSG----------------LFNGFVRNALGSCVDYDSS-SFRVHNG 149
SPVSVFQGP S +S LF GFVRNALGSCVDY + S R G
Sbjct: 110 SPVSVFQGPSSSPAASRSPPASWLAGRDRDRERLFAGFVRNALGSCVDYAPALSPRSEVG 169
Query: 150 DAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIKAFYE 207
EL F +++N+ E + E A+E LA AQ +H+IF E+ V+KAF+E
Sbjct: 170 GG------------ELAFELDENLAEASPACEPCARELLAGAQARHRIFLEELVVKAFFE 217
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
AE+AHRGQ RASGDPYL HCVETA+LLA IGANSTVV+AGLLHDT+DD+F+ YD+IF F
Sbjct: 218 AEKAHRGQTRASGDPYLQHCVETAVLLANIGANSTVVSAGLLHDTIDDSFIDYDHIFHMF 277
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM 327
GAGVADLVEGVSKLS LSKLAR+NNTAS+ VEADRLHTM LAMADARAVLIKLADR+HNM
Sbjct: 278 GAGVADLVEGVSKLSHLSKLARDNNTASRIVEADRLHTMLLAMADARAVLIKLADRVHNM 337
Query: 328 MTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE 387
TL+ALPL K+QRFAKET+EIFVPLANRLGIS+WK QLENLCFKHLNP++H +LSSKL +
Sbjct: 338 KTLEALPLGKQQRFAKETMEIFVPLANRLGISSWKDQLENLCFKHLNPEEHKDLSSKLTK 397
Query: 388 CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRL 447
FDE ++TSA++KL++ L+D +S+ L GRHKSLYSIH KMLKK LTMDEIHDI+GLRL
Sbjct: 398 SFDEVLITSAVDKLDRGLRDAGLSYHNLSGRHKSLYSIHNKMLKKNLTMDEIHDIHGLRL 457
Query: 448 IVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTK 507
+ E EEDCY+AL VVH+LW +VPG+ KDYI+RPK NGY+SLHTVV E + P EVQIRTK
Sbjct: 458 VFEKEEDCYRALDVVHELWPQVPGRFKDYISRPKLNGYRSLHTVVMSENVHPFEVQIRTK 517
Query: 508 EMHLQAEFGFAAHW 521
EMHLQAE+GFAAHW
Sbjct: 518 EMHLQAEYGFAAHW 531
>gi|414885657|tpg|DAA61671.1| TPA: hypothetical protein ZEAMMB73_267567 [Zea mays]
Length = 404
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 270/386 (69%), Positives = 328/386 (84%), Gaps = 7/386 (1%)
Query: 306 MFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 365
M LAMADARAVLIKLADRLHNM TL ALP K++RFAKET+EIFVPLANRLG+++WK QL
Sbjct: 1 MLLAMADARAVLIKLADRLHNMETLKALPCAKQERFAKETMEIFVPLANRLGVASWKDQL 60
Query: 366 ENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 425
ENLCFK+LNP++H ELSSKL E FDE ++TSA++KL++ L+D +S+ L GRHKSLYSI
Sbjct: 61 ENLCFKYLNPEEHEELSSKLRESFDEELITSAVDKLDKGLRDAGVSYHSLSGRHKSLYSI 120
Query: 426 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 485
HCKMLKK LTM+EIHDI+GLRL+VE+EEDCY+AL VVH+LW V G+ KDYI+RPK NGY
Sbjct: 121 HCKMLKKNLTMEEIHDIHGLRLLVESEEDCYEALCVVHRLWPRVTGRFKDYISRPKLNGY 180
Query: 486 QSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 545
+SLHTVV EG+ P EVQIRT+EMHLQAE+GFAAHWRYKEG C+H SFVL+MVEWARWVL
Sbjct: 181 RSLHTVVMSEGVHPFEVQIRTREMHLQAEYGFAAHWRYKEGTCRH-SFVLRMVEWARWVL 239
Query: 546 TWQCEAMSKDRSC-VGNGD---SIKPP--CTFPSHADDCPFSYKPQCSHDGPVFVIMIEN 599
TWQCEAM ++R+ +G+ D S++PP C FP HA+DCP+SY QC+HDGP+FVI++E+
Sbjct: 240 TWQCEAMDRERTASLGSDDGTVSVRPPPACPFPQHAEDCPYSYTRQCNHDGPLFVILLEH 299
Query: 600 DKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDV 659
KMSVQEFP + TVMDL++R G SSRWSPY P+KE+LRPR+N + + DP +L MGDV
Sbjct: 300 GKMSVQEFPANLTVMDLMDRVGANSSRWSPYSIPMKEDLRPRVNGEPICDPDRRLNMGDV 359
Query: 660 VELTPAIPDKSLTEYREEIQRMYERG 685
VELTPA+P KSL+ YREEIQRMY+RG
Sbjct: 360 VELTPALPRKSLSGYREEIQRMYDRG 385
>gi|242050856|ref|XP_002463172.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
gi|241926549|gb|EER99693.1| hypothetical protein SORBIDRAFT_02g039080 [Sorghum bicolor]
Length = 583
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 299/509 (58%), Positives = 366/509 (71%), Gaps = 15/509 (2%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
+A AQ +H IFR++ V +AF AE AHRGQ+RASGDPYL HCVETA LLA IGA VV
Sbjct: 88 LIAGAQSRHAIFRDELVRRAFAAAEAAHRGQVRASGDPYLQHCVETAALLAEIGAGPAVV 147
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
AAGLLHDT+DDA L Y +I FGAGVADLV+GVSKLS LSKLAR NNTAS+ EADRL
Sbjct: 148 AAGLLHDTVDDAGLGYGFISEHFGAGVADLVKGVSKLSHLSKLARRNNTASRIDEADRLR 207
Query: 305 TMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 364
+FLAM DARAVLIKLADRLHNM TLD+LP K+Q FAKETLEIF PLAN+LGI WK Q
Sbjct: 208 IVFLAMEDARAVLIKLADRLHNMRTLDSLPKNKQQSFAKETLEIFAPLANQLGILNWKEQ 267
Query: 365 LENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
LENLCFK+L PD+ ELS+ L E ++ M+ +A +LEQAL+ + +S+ + GRHKSLYS
Sbjct: 268 LENLCFKYLCPDKFDELSTSLTEFYNRDMIAAATRRLEQALQVRGLSYYAIYGRHKSLYS 327
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I+ KM +KKL MDEI+DI+G+R+I+EN+ DC+ AL ++H LW +PGK KDYI PK N
Sbjct: 328 IYSKMARKKLVMDEIYDIHGVRVILENKADCFAALEIIHHLWPRIPGKFKDYINSPKPNR 387
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH-SSFVLQMVEWARW 543
YQSLHTVV E +PLE+QIRT++MHLQAEFG AAHWRYKE + + V +MVEW RW
Sbjct: 388 YQSLHTVVLTEETLPLEIQIRTRDMHLQAEFGIAAHWRYKEVAARSCCTSVSEMVEWVRW 447
Query: 544 VLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKM 602
V+TW C+ ++ D S + S K T PSH+D C SY QC H GPV VI++EN+KM
Sbjct: 448 VITWHCQTLNTDHPSSLARDASSKETHTIPSHSDACLLSYSKQCDHKGPVLVILLENEKM 507
Query: 603 SVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 662
SVQE P T++DLL R S YG P LR RLN V + +LKMGDV+EL
Sbjct: 508 SVQEIPQDWTILDLLNR--------SNYGMP----LRLRLNCHVVHNWNQELKMGDVLEL 555
Query: 663 TPAIPDKSLTEYREEIQRMYERGLAVSNT 691
P+ P KS Y E+ + ++ LA+S +
Sbjct: 556 IPSTPCKS-RGYTRELHQKFDHRLAISQS 583
>gi|24059853|dbj|BAC21321.1| putative RSH, disease resistance-related protein [Oryza sativa
Japonica Group]
Length = 589
Score = 577 bits (1488), Expect = e-162, Method: Compositional matrix adjust.
Identities = 295/504 (58%), Positives = 365/504 (72%), Gaps = 15/504 (2%)
Query: 190 QLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLL 249
Q +H IFR++ V +AFY AE AHRGQMRASGDPYL HCVETA LLA +GA VVAAGLL
Sbjct: 99 QSRHAIFRDELVRRAFYAAEAAHRGQMRASGDPYLQHCVETAALLAELGAGPAVVAAGLL 158
Query: 250 HDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA 309
HDT+DDA L Y + FGAGVADLV+GVS LS LSKLAR N+TAS+ EAD+L T+FLA
Sbjct: 159 HDTVDDAGLGYGSLSVQFGAGVADLVKGVSNLSHLSKLARRNDTASRVDEADKLRTVFLA 218
Query: 310 MADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 369
M DARAVLIKLADRLHNM TLD+LP K+Q FAKETLEIF PLAN+LGI WK QLENLC
Sbjct: 219 MEDARAVLIKLADRLHNMRTLDSLPKVKQQCFAKETLEIFAPLANQLGILNWKEQLENLC 278
Query: 370 FKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 429
FK+L P+ + ELSS L+E +++ M+ +AI +LEQAL+ + + + + GR+KS+YSI+ KM
Sbjct: 279 FKYLYPELYEELSSNLLEFYNQDMIAAAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKM 338
Query: 430 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH 489
KKL MDEI+DI+G+R+I++N+ DC+ L +VH LW +PGK KDYI PK N YQSLH
Sbjct: 339 -AKKLDMDEIYDIHGVRVILDNKADCFTTLEIVHHLWPRIPGKFKDYINSPKPN-YQSLH 396
Query: 490 TVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQC 549
TVV E +PLE+QIRT++MHLQAEFG AAHWRYKE S V +MVEW RWV+TWQC
Sbjct: 397 TVVLSEETLPLEIQIRTRDMHLQAEFGIAAHWRYKEAVRNCCSSVPEMVEWVRWVVTWQC 456
Query: 550 EAMSKDR-SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFP 608
E + D S + +G + C+ S +DDCPFSY +C H GP+ VI++EN+KMSVQEFP
Sbjct: 457 ETLHIDHPSSLTHGAPPRAICSCSSQSDDCPFSYSKRCDHSGPILVILLENEKMSVQEFP 516
Query: 609 TSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTP-AIP 667
+STV+DLL+R S Y +LR RLN V + +LKMGDVVEL P A
Sbjct: 517 QNSTVLDLLKRT-------SSYDM----QLRLRLNCHVVHNLNQELKMGDVVELIPLAQC 565
Query: 668 DKSLTEYREEIQRMYERGLAVSNT 691
+ Y E +MY+ L VS +
Sbjct: 566 NPGAGGYAREFHQMYDHRLTVSQS 589
>gi|414887563|tpg|DAA63577.1| TPA: hypothetical protein ZEAMMB73_929416 [Zea mays]
Length = 614
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 292/508 (57%), Positives = 366/508 (72%), Gaps = 14/508 (2%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
+A AQ +H IFR++ V +AF AE AHRGQ+RASGDPYL HCVETA LLA +GA VV
Sbjct: 120 LIAGAQSRHAIFRDELVRRAFTAAEAAHRGQVRASGDPYLQHCVETAALLAELGAGPAVV 179
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
AAGLLHDT+DDA L Y +I FGAGVADLV+GVS LS LSKLAR N+TAS+ EADRL
Sbjct: 180 AAGLLHDTVDDAGLGYGFISEHFGAGVADLVKGVSNLSHLSKLARRNDTASRIDEADRLR 239
Query: 305 TMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 364
+FLAM DARAVLIKLADRLHNM TLD+L K+Q AKETLEIF PLAN+LGI WK Q
Sbjct: 240 IVFLAMEDARAVLIKLADRLHNMRTLDSLSKTKQQSVAKETLEIFAPLANQLGILNWKEQ 299
Query: 365 LENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
LENLCFK+L P+ ELS+KL+E ++ M+ +A +LEQAL+ + +S+ + GRHKS+YS
Sbjct: 300 LENLCFKYLYPENFDELSTKLIEIYNIDMIAAATRRLEQALQVRGLSYYAIYGRHKSMYS 359
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I+ KM +KKL MD+I+DI+G+R+I+EN+ DC+ L ++H LW +PGK KDYI PK N
Sbjct: 360 IYRKMARKKLVMDKIYDIHGVRVILENKADCFATLEIIHHLWPRIPGKFKDYINSPKPNR 419
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 544
YQSLHTVV E +PLE+QIRT++MHLQAEFG AAHWRYKEG+ + V ++VEW RWV
Sbjct: 420 YQSLHTVVLTEQTLPLEIQIRTRDMHLQAEFGIAAHWRYKEGERSCCTSVSEIVEWVRWV 479
Query: 545 LTWQCEAMSKDR-SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMS 603
TW C+ ++ S + S K T PSH+D C SY QC H GPV VI++EN+KMS
Sbjct: 480 -TWHCQTLNTGYPSSLACDASSKETHTIPSHSDACLLSYSKQCDHKGPVLVILLENEKMS 538
Query: 604 VQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELT 663
VQE P + T++DLL+R+ S YG P LR RLN AV + +LKMGDV+EL
Sbjct: 539 VQEIPQNWTILDLLKRS-------SNYGMP----LRLRLNCHAVHNWNQELKMGDVLELI 587
Query: 664 PAIPDKSLTEYREEIQRMYERGLAVSNT 691
P+ P KS R E+ + ++ LAVS +
Sbjct: 588 PSTPCKSRGHTR-ELHQKFDHRLAVSQS 614
>gi|302784096|ref|XP_002973820.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
gi|300158152|gb|EFJ24775.1| hypothetical protein SELMODRAFT_100367 [Selaginella moellendorffii]
Length = 542
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 289/519 (55%), Positives = 364/519 (70%), Gaps = 24/519 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E L +AQ +HK+F++ F+IKAF AE AHRG R SG+ YL HCVETA+LLA+ GA +TV
Sbjct: 1 EILVDAQRRHKVFKDPFIIKAFRLAEEAHRGHFRRSGELYLTHCVETAILLASAGAEATV 60
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
VAAGLLHDTLDD+ + I FG VADLV GVSK+SQLS+LAR+NN ASKT+EADRL
Sbjct: 61 VAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQLSQLARDNNIASKTLEADRL 120
Query: 304 HTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
TMFLAM D R VLIKLADRLHNM TL+AL K+ R A ETLEI VP+ANRLGI +WK
Sbjct: 121 RTMFLAMVDVRVVLIKLADRLHNMRTLEALAAEKQNRIASETLEILVPIANRLGIWSWKA 180
Query: 364 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 423
++E+LCFK+LNP ++ EL++KL+EC +V SAIE+L++AL+ I LCGR K+L+
Sbjct: 181 EMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAIEQLDKALRKSKIKIEDLCGRSKTLF 240
Query: 424 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 483
SI+ KM KK ++DEI+D+ GLRLIV++E DCY+AL VH+LW +PGK+KDYI +PK N
Sbjct: 241 SIYTKMKKKGRSIDEIYDVRGLRLIVKDEADCYKALEFVHKLWDHIPGKLKDYIKQPKAN 300
Query: 484 GYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQMVEWAR 542
GYQSLHTVV+G+ +PLEVQIRTKEMH AEFG AAHWRYKEG D +HS+F+LQ VEWAR
Sbjct: 301 GYQSLHTVVSGKDGLPLEVQIRTKEMHSHAEFGMAAHWRYKEGNDTKHSAFLLQRVEWAR 360
Query: 543 WVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDC----PFSYKPQCSHDGPVFVIMIE 598
W+LTW E M + +K C FP H DDC PFS P+ S D P+FVIM++
Sbjct: 361 WILTWHSEIMDNKLRVSPSHMDLKSSCPFPFHKDDCRHAHPFSGPPE-SEDDPLFVIMLK 419
Query: 599 NDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGD 658
++ M VQE P T DL+ G P + E+ PR+NH+ V + KL+MGD
Sbjct: 420 DETMIVQELPPGCTAADLVTERGADHFLLDP---GVLSEMTPRVNHQEVENFHQKLRMGD 476
Query: 659 VVEL---------------TPAIPDKSLTEYREEIQRMY 682
VVE+ PA ++ YRE+I+RMY
Sbjct: 477 VVEIVDKEERSKVLVTMARVPAKASNEISVYREQIRRMY 515
>gi|302803634|ref|XP_002983570.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
gi|300148813|gb|EFJ15471.1| hypothetical protein SELMODRAFT_118606 [Selaginella moellendorffii]
Length = 540
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 286/516 (55%), Positives = 362/516 (70%), Gaps = 20/516 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E L +AQ +HK+F++ F+IKAF AE AHRG R SG+ YL HCVETA+LLA+ GA +TV
Sbjct: 1 EILVDAQRRHKVFKDPFIIKAFRLAEEAHRGHFRRSGELYLTHCVETAILLASAGAEATV 60
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
VAAGLLHDTLDD+ + I FG VADLV GVSK+SQLS+LAR+NN ASKT+EA RL
Sbjct: 61 VAAGLLHDTLDDSSIDEAQIRAIFGDDVADLVVGVSKISQLSQLARDNNIASKTLEAGRL 120
Query: 304 HTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
TMFLAM D R VLIKLADRLHNM TL+AL K+ R A ETLEI VP+ANRLGI +WK
Sbjct: 121 RTMFLAMVDVRVVLIKLADRLHNMRTLEALATEKQNRIASETLEILVPIANRLGIWSWKA 180
Query: 364 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 423
++E+LCFK+LNP ++ EL++KL+EC +V SAIE+L++AL+ I LCGR K+L+
Sbjct: 181 EMEDLCFKYLNPTEYQELAAKLIECCRGGVVLSAIEQLDKALRKSKIKIEDLCGRSKTLF 240
Query: 424 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 483
SI+ KM KK ++DEI+D+ GLRLIV++E DCY+AL VH+LW +PGK+KDYI +PK N
Sbjct: 241 SIYTKMKKKGRSIDEIYDVRGLRLIVKDEADCYKALEFVHKLWDHIPGKLKDYIKQPKAN 300
Query: 484 GYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQMVEWAR 542
GYQSLHTVV+G+ +PLEVQIRTKEMH AEFG AAHWRYKEG D +HS+F+LQ VEWAR
Sbjct: 301 GYQSLHTVVSGKDGLPLEVQIRTKEMHSHAEFGMAAHWRYKEGNDTKHSAFLLQRVEWAR 360
Query: 543 WVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYK-PQCSHDGPVFVIMIENDK 601
W+LTW E M + +K C FP H DDC ++ P S D P+FVIM++++K
Sbjct: 361 WILTWHSEIMDNKLRVSPSHMDLKSSCPFPFHKDDCRHAFSGPPESEDDPLFVIMLKDEK 420
Query: 602 MSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVE 661
M VQE P T DL+ G P + E+ PR+NH+ V + KL+MGDVVE
Sbjct: 421 MIVQELPPGCTAADLVTERGEDHFLLDP---GVLSEMTPRVNHQEVENFHQKLRMGDVVE 477
Query: 662 L---------------TPAIPDKSLTEYREEIQRMY 682
+ PA ++ YRE+I+RMY
Sbjct: 478 IVEKEERSKVLVTMARVPAKASNEISVYREQIRRMY 513
>gi|224111520|ref|XP_002332921.1| predicted protein [Populus trichocarpa]
gi|222872004|gb|EEF09135.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 264/321 (82%), Positives = 291/321 (90%), Gaps = 1/321 (0%)
Query: 282 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRF 341
SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM+TLDALPL K+QRF
Sbjct: 1 SQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMITLDALPLVKQQRF 60
Query: 342 AKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKL 401
AKET++IF PLANRLGISTWK QLE LCFKHLNPDQH LS++LVE FDEAM+ SA EKL
Sbjct: 61 AKETMQIFAPLANRLGISTWKEQLETLCFKHLNPDQHRHLSARLVESFDEAMIASAKEKL 120
Query: 402 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRV 461
++AL D+ IS+ L GRHKSLYSIHCKM KKKL MD+IHDI+GLRLIVEN+EDCY+ALRV
Sbjct: 121 DKALTDEAISY-NLHGRHKSLYSIHCKMSKKKLNMDQIHDIHGLRLIVENKEDCYRALRV 179
Query: 462 VHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHW 521
VH LW+EVPG+ KDYIT PKFNGY+SLHTVV GEG VPLEVQIRTKEMHLQAEFGFAAHW
Sbjct: 180 VHCLWSEVPGQFKDYITNPKFNGYRSLHTVVMGEGTVPLEVQIRTKEMHLQAEFGFAAHW 239
Query: 522 RYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFS 581
RYKEGDC+HSSFVLQ+VEWARWV+TWQCE MSKDR +G DSIKPPCTFPSH+D CP+S
Sbjct: 240 RYKEGDCKHSSFVLQVVEWARWVITWQCETMSKDRPSIGCDDSIKPPCTFPSHSDGCPYS 299
Query: 582 YKPQCSHDGPVFVIMIENDKM 602
YKP C DGP+F+IMIENDK+
Sbjct: 300 YKPHCGQDGPIFIIMIENDKV 320
>gi|222637445|gb|EEE67577.1| hypothetical protein OsJ_25106 [Oryza sativa Japonica Group]
Length = 467
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 280/478 (58%), Positives = 347/478 (72%), Gaps = 13/478 (2%)
Query: 216 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 275
MRASGDPYL HCVETA LLA +GA VVAAGLLHDT+DDA L Y + FGAGVADLV
Sbjct: 1 MRASGDPYLQHCVETAALLAELGAGPAVVAAGLLHDTVDDAGLGYGSLSVQFGAGVADLV 60
Query: 276 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 335
+GVS LS LSKLAR N+TAS+ EAD+L T+FLAM DARAVLIKLADRLHNM TLD+LP
Sbjct: 61 KGVSNLSHLSKLARRNDTASRVDEADKLRTVFLAMEDARAVLIKLADRLHNMRTLDSLPK 120
Query: 336 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 395
K+Q FAKETLEIF PLAN+LGI WK QLENLCFK+L P+ + ELSS L+E +++ M+
Sbjct: 121 VKQQCFAKETLEIFAPLANQLGILNWKEQLENLCFKYLYPELYEELSSNLLEFYNQDMIA 180
Query: 396 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 455
+AI +LEQAL+ + + + + GR+KS+YSI+ KM +KKL MDEI+DI+G+R+I++N+ DC
Sbjct: 181 AAIRRLEQALQVRGLCYHTISGRNKSMYSIYSKMARKKLDMDEIYDIHGVRVILDNKADC 240
Query: 456 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 515
+ L +VH LW +PGK KDYI PK NGYQSLHTVV E +PLE+QIRT++MHLQAEF
Sbjct: 241 FTTLEIVHHLWPRIPGKFKDYINSPKPNGYQSLHTVVLSEETLPLEIQIRTRDMHLQAEF 300
Query: 516 GFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR-SCVGNGDSIKPPCTFPSH 574
G AAHWRYKE S V +MVEW RWV+TWQCE + D S + +G + C+ S
Sbjct: 301 GIAAHWRYKEAVRNCCSSVPEMVEWVRWVVTWQCETLHIDHPSSLTHGAPPRAICSCSSQ 360
Query: 575 ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPL 634
+DDCPFSY +C H GP+ VI++EN+KMSVQEFP +STV+DLL+R S Y
Sbjct: 361 SDDCPFSYSKRCDHSGPILVILLENEKMSVQEFPQNSTVLDLLKRT-------SSYDM-- 411
Query: 635 KEELRPRLNHKAVGDPRCKLKMGDVVELTP-AIPDKSLTEYREEIQRMYERGLAVSNT 691
+LR RLN V + +LKMGDVVEL P A + Y E +MY+ L VS +
Sbjct: 412 --QLRLRLNCHVVHNLNQELKMGDVVELIPLAQCNPGAGGYAREFHQMYDHRLTVSQS 467
>gi|357514021|ref|XP_003627299.1| GTP pyrophosphokinase [Medicago truncatula]
gi|355521321|gb|AET01775.1| GTP pyrophosphokinase [Medicago truncatula]
Length = 467
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 309/465 (66%), Positives = 354/465 (76%), Gaps = 43/465 (9%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGGLSC 63
MAV TIALYASPPSSVCS HQIN YDF+L SRSS+ S+ A+ K +GGLSC
Sbjct: 1 MAVSTIALYASPPSSVCSTPHQIN----YDFELGSRSSSPASTAASTSG--KSVMGGLSC 54
Query: 64 LFSSS------------SEMGSYRSEELKELSSSFGYAYSPSKLCGSSSSLKRDQSPVSV 111
LFSS S G +ELKELSSSF Y++SP+K GS KRD SPVSV
Sbjct: 55 LFSSPTVVKHVPFTSSFSGGGGGDEDELKELSSSFSYSFSPTKFGGS---WKRDHSPVSV 111
Query: 112 FQGPVSCSGSSG----------------LFNGFVRNALGS-CVDYDSSSFRVHNGDAVLN 154
FQ PVSCS S G +GFVR+ALGS C+DYDS+ R+ G +
Sbjct: 112 FQCPVSCSSSIGAGTGTVRSGRGSTGGGFLDGFVRSALGSSCLDYDSTGVRLRGGGGEFD 171
Query: 155 VGS-SAALIDELTFNMEDNIVEG----NLETYAKEFLANAQLKHKIFREDFVIKAFYEAE 209
+ ++DELTFN++D VEG +E YAK+ L NAQL+HKIF E+FVIKAF EAE
Sbjct: 172 GVGGDSGIVDELTFNLDDTFVEGCVGIEIEPYAKKLLMNAQLRHKIFCEEFVIKAFCEAE 231
Query: 210 RAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGA 269
+AHRGQMRASGDPYL HC+ETA+LLA IGANSTVVAAGLLHDT+DDAFL+YDYI+ FGA
Sbjct: 232 KAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDTVDDAFLTYDYIYGMFGA 291
Query: 270 GVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMT 329
GVADLVEGVSKLS LSKLAR+NNTASK+VEADRLHTMFLAMADARAVLIKLADRLHNMMT
Sbjct: 292 GVADLVEGVSKLSHLSKLARDNNTASKSVEADRLHTMFLAMADARAVLIKLADRLHNMMT 351
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
LDALP+ K+QRFAKETLEIF PLANRLGI+ WK QLENLCFKHLNP QH ELSSKLVE +
Sbjct: 352 LDALPVAKQQRFAKETLEIFAPLANRLGIANWKDQLENLCFKHLNPVQHKELSSKLVESY 411
Query: 390 DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
D+AM+ SAIE+LEQALKD+ IS+ V+ GRHKSLYS++CK+LK L
Sbjct: 412 DDAMIASAIERLEQALKDEGISYHVISGRHKSLYSVYCKILKYVL 456
>gi|168004491|ref|XP_001754945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694049|gb|EDQ80399.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 573
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 265/508 (52%), Positives = 341/508 (67%), Gaps = 8/508 (1%)
Query: 165 LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYL 224
L E+ V+ + T A + L +AQ ++K+F + V+KAF AE AHRGQ R +GD +L
Sbjct: 12 LPVTTEEAKVKTSAGTSADDLLKSAQARYKVFCDPVVVKAFRMAEEAHRGQFRRNGDTFL 71
Query: 225 LHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQL 284
HCVETA++LAA G +TVVAAGLLHD +DD+ LS + G VA LV GVSKLS+
Sbjct: 72 SHCVETALILAATGVGNTVVAAGLLHDAIDDSNLSLQLLRGALGEDVASLVSGVSKLSEF 131
Query: 285 SKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKE 344
S+LAR++NT EAD L TM LAM D R VLIK+ADRLHN+ TL ALP K+ A E
Sbjct: 132 SQLARDSNTVRDPTEADSLRTMILAMVDVRVVLIKIADRLHNLRTLGALPYLKQIGIANE 191
Query: 345 TLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQA 404
TLEIF PLANRLGI +WK +LE+LCFK L P +H +LS++L E E +V S+I L+ A
Sbjct: 192 TLEIFAPLANRLGIWSWKAELEDLCFKCLKPVEHQDLSARLSERCREGLVMSSIRDLDDA 251
Query: 405 LKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQ 464
L+++ + F+ L GR K+LYSI+ KM+KKK T +EI D+ GLRLIV +E +CY+AL++VH+
Sbjct: 252 LRNEGVQFVDLSGRPKNLYSIYKKMMKKKRTPEEILDVRGLRLIVSDENNCYEALQIVHK 311
Query: 465 LWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 524
LW +VPGK KDYI K NGY+SLHTVV G PLEVQIRT +MH QAE+G AAHWRYK
Sbjct: 312 LWKQVPGKSKDYIAHSKPNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEYGLAAHWRYK 371
Query: 525 EGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYK- 583
E + QHS+F + VEWARWVLTW E M G+ +KPPC FP H DCP++
Sbjct: 372 EDNTQHSAFSSERVEWARWVLTWHSEIMDTKLRVSPLGEDLKPPCPFPVHNKDCPYASTC 431
Query: 584 --PQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRW---SPYGFPLKEEL 638
P D PVFVI +EN+++ V E P STV DL+ + S YG ++EL
Sbjct: 432 CGPLFREDDPVFVIKMENERIVVLEMPPGSTVGDLVSMRKSDMDSFAVNSNYGH--QKEL 489
Query: 639 RPRLNHKAVGDPRCKLKMGDVVELTPAI 666
R ++NH+ V + KLKMGD VE+ +
Sbjct: 490 RVQVNHQFVENLEQKLKMGDFVEVLSTV 517
>gi|326506174|dbj|BAJ86405.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 505
Score = 513 bits (1322), Expect = e-142, Method: Compositional matrix adjust.
Identities = 281/524 (53%), Positives = 360/524 (68%), Gaps = 59/524 (11%)
Query: 4 MAVPTIALYASPPSSVCSATHQINAHTTYDFDLNSRSSASTSSTAAAPSSQKQTIGG--- 60
M++ I+LY +PP + S++ ++ +FD SR S+ S+ A P +
Sbjct: 1 MSLSAISLYTTPPGAAYSSS------SSSEFDPGSRGSSPCSTAAPPPPAASHRPAAGAG 54
Query: 61 ---LSCLFSSS------------SEMGSYRSEELKELS-----SSFGYAYSPSKLCGSSS 100
LSCLFSS E+G+ + +LS GY++SPS L
Sbjct: 55 AGGLSCLFSSPAAAAAPPRAPAHDELGALWHDGSDDLSFGGGGGGGGYSHSPSPLKWRDI 114
Query: 101 SLKRDQSPVSVFQGP--------------VSCSGSSGLFNGFVRNALGSCVDY-DSSSFR 145
SPVSVFQGP ++ LF+GFVRNALGSC+DY ++S R
Sbjct: 115 HHHH-HSPVSVFQGPSSSPASRSPSSASWLTGRERDRLFSGFVRNALGSCIDYVPATSPR 173
Query: 146 VHNGDAVLNVGSSAALIDELTFNMEDNIVEGN--LETYAKEFLANAQLKHKIFREDFVIK 203
G EL F +++N+ + E YA+E LA AQ +H+IF E+ V+K
Sbjct: 174 PEVGGG------------ELAFELDENLAGASPACEPYAQELLAGAQARHRIFHEELVVK 221
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
AF+EAE+AH GQ RASGDP+L HCVETA+LLA IGA++TVV+AGLLHDT+DD+F+ YD+I
Sbjct: 222 AFFEAEKAHHGQTRASGDPFLQHCVETAVLLAKIGASATVVSAGLLHDTIDDSFVDYDHI 281
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
F FGAGVADLVEGVSKLS LSKLAR+NNTAS+T EADRLHTM LAMADARAVLIKLADR
Sbjct: 282 FHMFGAGVADLVEGVSKLSHLSKLARDNNTASRTAEADRLHTMLLAMADARAVLIKLADR 341
Query: 324 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS 383
+HNM TL+ALPL K+QRFAKET+EIFVPLANRLGI++WK QLENLCFKHLNP++H ELSS
Sbjct: 342 VHNMRTLEALPLVKQQRFAKETMEIFVPLANRLGIASWKDQLENLCFKHLNPEEHKELSS 401
Query: 384 KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 443
K E FDEA++TSA++ L++ L++ IS+ L GR+K+LYS++ KM KK LTMDE+HDI+
Sbjct: 402 KFAETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIH 461
Query: 444 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQS 487
GLRL+V+ EEDCY+AL VVH+LW +V G+ KDYI+ PK NGY +
Sbjct: 462 GLRLVVDKEEDCYRALDVVHKLWPQVDGRFKDYISLPKLNGYAA 505
>gi|62319609|dbj|BAD95087.1| RSH3 [Arabidopsis thaliana]
Length = 321
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/321 (75%), Positives = 275/321 (85%), Gaps = 4/321 (1%)
Query: 381 LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+S L + FDEAM+TSAIEKLEQALK + IS+ V+ GRHKSLYSI+CKMLKKKLTMDEIH
Sbjct: 1 MSDMLEDSFDEAMITSAIEKLEQALKKEGISYHVVSGRHKSLYSIYCKMLKKKLTMDEIH 60
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
DI+GLRLIV+NE+DCY+AL VVH+LW+EVPGK+KDYI+ PKFNGYQSLHTVV G+G +PL
Sbjct: 61 DIHGLRLIVDNEKDCYKALGVVHKLWSEVPGKLKDYISHPKFNGYQSLHTVVMGDGTIPL 120
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG 560
EVQIRTKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S +
Sbjct: 121 EVQIRTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSIC 180
Query: 561 NGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERA 620
+ + P C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RA
Sbjct: 181 SSE---PLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRA 237
Query: 621 GRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQR 680
G GSSRWS Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQR
Sbjct: 238 GPGSSRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQR 297
Query: 681 MYERGLAVSNTGPAVT-SMVG 700
MY+RGLA S A T +MVG
Sbjct: 298 MYDRGLAFSRPHRAATGTMVG 318
>gi|168052096|ref|XP_001778487.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670085|gb|EDQ56660.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/512 (51%), Positives = 338/512 (66%), Gaps = 8/512 (1%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A E L +AQ ++K F + V+KAF AE AH+GQ R +GD +L HCVETA++LAA G +
Sbjct: 14 ADELLRSAQARYKAFYDPIVVKAFRMAEEAHKGQFRRNGDMFLAHCVETALILAATGVGN 73
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
VVAAGLLHD +DD+ LS + + + G VA LV GVSKLS+ S+LAR+ NT T+EAD
Sbjct: 74 IVVAAGLLHDAIDDSNLSLELLRCSLGENVASLVIGVSKLSEFSQLARDCNTVCDTLEAD 133
Query: 302 RLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
RL TM LAM D R VLIK+ADRLHN+ TL+ALP K+ AKETLEIF PLANRLGI +W
Sbjct: 134 RLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIGIAKETLEIFAPLANRLGIWSW 193
Query: 362 KVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKS 421
K ++E+LCFK L P H LS +L E E +V S+I L++AL+ + F+ LCGR K+
Sbjct: 194 KAEMEDLCFKCLKPVDHENLSIRLSERCREGLVMSSIRDLDEALRVGGVQFIDLCGRPKN 253
Query: 422 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 481
LYS++ KM+KKK + DEI D+ GLRLIV +EE CYQAL VVHQLW +PGK KDYI K
Sbjct: 254 LYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESCYQALEVVHQLWRCIPGKTKDYIVDSK 313
Query: 482 FNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWA 541
NGY+SLHTVV G PLEVQIRT +MH QAE+G AAHWRYKE + +HS+F + VEWA
Sbjct: 314 PNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEYGLAAHWRYKEDNSEHSAFSSERVEWA 373
Query: 542 RWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFS---YKPQCSHDGPVFVIMIE 598
RWVLTWQ E M +KPPC FP H +CP++ +P + PV+VI +E
Sbjct: 374 RWVLTWQSEIMDTKLRVSPLAADLKPPCPFPVHIKECPYAGSCCEPVMRENDPVYVIKME 433
Query: 599 NDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEE-LRPRLNHKAVGDPRCKLKMG 657
N+ + V+E P STV DL+ + + LR ++NH+ V KLKMG
Sbjct: 434 NEHILVRELPPGSTVGDLVRSKHSDMNSLVVDSRSANDNGLRVKVNHEFVDTMEQKLKMG 493
Query: 658 DVVELTPAIPDK----SLTEYREEIQRMYERG 685
D VE+ + +L RE+++R+Y G
Sbjct: 494 DFVEVMSTVKKPCGKVALEFQREQLKRLYLDG 525
>gi|168066267|ref|XP_001785062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663355|gb|EDQ50123.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 627
Score = 494 bits (1271), Expect = e-137, Method: Compositional matrix adjust.
Identities = 254/520 (48%), Positives = 342/520 (65%), Gaps = 10/520 (1%)
Query: 174 VEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAML 233
VE + T A E L AQ + +F + V+KAF AE AHRGQ+R +GD +L HCVETA+
Sbjct: 89 VETSTATTADEILKGAQDRFNVFYDPVVVKAFRMAEEAHRGQVRRNGDMFLSHCVETALT 148
Query: 234 LAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNT 293
LAAIG ++TV+AAGLLHD +DD+ + T G VA+LV GVSKLS+ S+LAR++NT
Sbjct: 149 LAAIGVSNTVIAAGLLHDAIDDSNFCLKRLRDTLGEDVANLVIGVSKLSEFSQLARDSNT 208
Query: 294 ASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 353
+EADRL TM LA+ D R VL+K+ADRLHN+ TL+ALP K+ A ETL IF PLA
Sbjct: 209 VGNPMEADRLRTMILALVDVRVVLVKIADRLHNLRTLEALPSHKQIGIATETLGIFAPLA 268
Query: 354 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
NRLGI WK +LE+LCFK+L P+ H +LS +L E E +V S+I+ L++AL+ + + F+
Sbjct: 269 NRLGIWRWKAELEDLCFKYLKPEDHQDLSMRLSERCREGLVMSSIKNLDEALRIRGVEFI 328
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
LCGR K+LYS++ KM+KKK +++EI D+ GLRLIV +E CY+AL +VHQL +PGK
Sbjct: 329 DLCGRPKNLYSVYKKMMKKKRSLEEILDVIGLRLIVSDENSCYEALEIVHQLC--MPGKS 386
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI K NGY+SLHTVV G PLEVQIRT +MH QAE+G AAHWRYKE + +HS+F
Sbjct: 387 KDYIVDSKPNGYKSLHTVVIGSDGYPLEVQIRTMKMHHQAEYGLAAHWRYKEDNSEHSAF 446
Query: 534 VLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSY---KPQCSHDG 590
+ +EWARWVLTW E M G +KPPC FP H CP+ +P +
Sbjct: 447 SFERIEWARWVLTWHSEIMDTKLRVSPLGADLKPPCPFPVHNKGCPYEAHCCEPTVKEND 506
Query: 591 PVFVIMIENDKMSVQEFPTSSTVMDLL-ERAGRGSSRWSPYGFPLKEELRPRLNHKAVGD 649
PVFV+ +E++ + V+E P ST+ DL+ A + + LR ++NH+ V +
Sbjct: 507 PVFVVKMEDEHIFVREMPPGSTIGDLVCATASHVDFLAADSTSANQNGLRVKVNHEFVNN 566
Query: 650 PRCKLKMGDVVELTPAIPDK----SLTEYREEIQRMYERG 685
KL+MGD VE+ + +L RE+++R+Y G
Sbjct: 567 LEQKLRMGDFVEVVTTVEKPCGKIALEFQREQLKRLYLDG 606
>gi|154269268|gb|ABS72194.1| RSH2, partial [Corchorus olitorius]
Length = 239
Score = 437 bits (1124), Expect = e-120, Method: Compositional matrix adjust.
Identities = 197/239 (82%), Positives = 218/239 (91%)
Query: 338 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSA 397
+QRFAKETLEIF PLANRLGIS+WK QLENLCFKHLNPDQH ELSS+LV FDEAM+TSA
Sbjct: 1 QQRFAKETLEIFAPLANRLGISSWKEQLENLCFKHLNPDQHKELSSRLVNSFDEAMITSA 60
Query: 398 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 457
IEKLE+ALKDK I + VL GRHKSLY I+ KMLKKKL MDEIHDI+GLR+IVENEEDCY+
Sbjct: 61 IEKLERALKDKEIPYHVLSGRHKSLYGIYSKMLKKKLAMDEIHDIHGLRIIVENEEDCYE 120
Query: 458 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 517
ALRVVHQLW+EVPGK+KDYI+ PKFNGYQSLHTVV GEG VPLEVQIRTKEMHLQAEFGF
Sbjct: 121 ALRVVHQLWSEVPGKLKDYISHPKFNGYQSLHTVVKGEGTVPLEVQIRTKEMHLQAEFGF 180
Query: 518 AAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHAD 576
AAHWRYKEGDC+HSSF+LQMVEWARWV+TW CE MSKDRS +G DS+KPPC FP+H++
Sbjct: 181 AAHWRYKEGDCKHSSFILQMVEWARWVVTWHCETMSKDRSSIGYNDSVKPPCAFPTHSE 239
>gi|168052100|ref|XP_001778489.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670087|gb|EDQ56662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 389
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/378 (51%), Positives = 246/378 (65%), Gaps = 4/378 (1%)
Query: 293 TASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPL 352
T T EADRL TM LAM D R VLIK+ADRLHN+ TL+ALP K+ AKETLEIF PL
Sbjct: 1 TVCDTTEADRLRTMILAMVDVRVVLIKIADRLHNLRTLEALPSHKQIGIAKETLEIFAPL 60
Query: 353 ANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISF 412
ANRLGI +WK ++E+LCFK L P H LS +L E E +V S+I L++AL+ + F
Sbjct: 61 ANRLGIWSWKAEMEDLCFKCLKPVDHENLSIRLSERCREGLVMSSIRYLDEALRVGGVQF 120
Query: 413 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 472
+ LCGR K+LYS++ KM+KKK + DEI D+ GLRLIV +EE CYQAL VVHQLW +PGK
Sbjct: 121 IDLCGRPKNLYSVYKKMMKKKRSPDEILDVRGLRLIVTDEESCYQALEVVHQLWRCIPGK 180
Query: 473 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
KDYI K NG +SLHTVV G PLEVQIRT +MH QAE+G AAHWRYKE + +HS+
Sbjct: 181 TKDYIVDSKPNGCKSLHTVVIGSDGYPLEVQIRTMKMHHQAEYGLAAHWRYKEDNSEHSA 240
Query: 533 FVLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFS---YKPQCSHD 589
F + VEWARWVLTWQ E M +KPPC FP H +CP++ +P +
Sbjct: 241 FSSERVEWARWVLTWQSEIMDTKLRVSPLAADLKPPCPFPVHNKECPYAGSCCEPVMREN 300
Query: 590 GPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEE-LRPRLNHKAVG 648
PV+VI +EN+ + V+E P STV DL+ + + LR ++NH+ V
Sbjct: 301 DPVYVIKMENEHILVRELPPGSTVGDLVRSKHSDMNSLVVDSRSANDNGLRVKVNHEFVD 360
Query: 649 DPRCKLKMGDVVELTPAI 666
KLKMGD VE+ +
Sbjct: 361 TMEPKLKMGDFVEVMSTV 378
>gi|110737342|dbj|BAF00616.1| putative GTP pyrophosphokinase [Arabidopsis thaliana]
Length = 216
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 182/216 (84%), Positives = 193/216 (89%)
Query: 216 MRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLV 275
MRAS DPYL HCVETAMLLA IGANSTVV AGLLHDT+DD+F+SYDYI R FGAGVADLV
Sbjct: 1 MRASRDPYLQHCVETAMLLANIGANSTVVVAGLLHDTIDDSFMSYDYILRNFGAGVADLV 60
Query: 276 EGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPL 335
EGVSKLSQLSKLARENNTA KTVEADRLHTMFLAMADARAVLIKLADRLHNM TL AL
Sbjct: 61 EGVSKLSQLSKLARENNTACKTVEADRLHTMFLAMADARAVLIKLADRLHNMKTLYALSP 120
Query: 336 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVT 395
K+QRFAKETLEIF PLANRLGISTWKVQLENLCFKHL P+QH E+S+ L + FDEAM+T
Sbjct: 121 VKQQRFAKETLEIFAPLANRLGISTWKVQLENLCFKHLYPNQHNEMSTMLEDSFDEAMIT 180
Query: 396 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
SAIEKLEQALK IS+ VLCGRHKSLYSI+ KMLK
Sbjct: 181 SAIEKLEQALKKAGISYHVLCGRHKSLYSIYSKMLK 216
>gi|255085290|ref|XP_002505076.1| predicted protein [Micromonas sp. RCC299]
gi|226520345|gb|ACO66334.1| predicted protein [Micromonas sp. RCC299]
Length = 736
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 204/555 (36%), Positives = 294/555 (52%), Gaps = 67/555 (12%)
Query: 172 NIVEGNLETYAKE---FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCV 228
++ G LE + L AQ +H F V+ AF A AHRGQ+R SGD L V
Sbjct: 119 GLLSGRLEALTADEEAMLLAAQARHDAFSSPAVVSAFRVAAAAHRGQLRKSGDSVLSAQV 178
Query: 229 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 288
TA+++A +G +S VVA LLHD LDD ++ + T + +V GVSKLS +S+L
Sbjct: 179 GTALIVAELGMDSKVVATALLHDVLDDTPVTERELRNTTPDSIVTMVTGVSKLSLVSQLQ 238
Query: 289 RENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
R + + E +L + +AM D R V++KLADRL + T+ AL R A+ETL I
Sbjct: 239 RSSGRSLAREERLKLRALLVAMTDVRVVIVKLADRLQCLETIHALGEDTATRIAQETLSI 298
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQAL-KD 407
+VPLA+RLGI + K +LE+ CF +L+P+ H LS++L +A V A+E + L D
Sbjct: 299 YVPLASRLGIWSLKTRLEDACFAYLHPEAHASLSAELARDEQKAAVQRAVEDITSTLVAD 358
Query: 408 KNISFL-VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 466
IS + + GR KSL+S+H KML+K + + ++HD+ +R+IV++E+DCY AL +H +
Sbjct: 359 AGISDVHDIYGRAKSLFSVHRKMLRKGIALGDVHDLRAVRVIVDSEDDCYAALEAIHGKF 418
Query: 467 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
A VPGK KDY+ K NGYQSLHTVV P+EVQIRT EMH AE G AAHWRYKE
Sbjct: 419 APVPGKTKDYVRNAKVNGYQSLHTVVVAADGAPVEVQIRTAEMHRAAESGMAAHWRYKES 478
Query: 527 DCQHSSFVLQMVEWARWVLTWQ-------CEAMS-KDRSCVGNG------DSIKP----P 568
H + +Q V WAR++L+WQ C A + + +G G ++++P
Sbjct: 479 VVNHRAIDVQ-VAWARFMLSWQGQLVDDKCRAAGVRIATAMGAGGGSVELEALQPCVPCE 537
Query: 569 CTFPSHADDCP-------FSYKPQCSH-----------------------------DGPV 592
C FP+H DDCP F C P+
Sbjct: 538 CPFPAHCDDCPNHEDAILFGACGACGGAESSVSSLVSADSASMSKQRRPASSPLEVSAPI 597
Query: 593 FVIMIENDKMSVQEFPTSSTV--MDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAV--- 647
FV+++ + M+V E + + +D G F E + +N ++V
Sbjct: 598 FVVVVVDGDMAVVELAKGARLSDVDFASVCGDEPGAVRTAEFTAVESI--AVNRESVPPG 655
Query: 648 GDPRCKLKMGDVVEL 662
+P L+MGD+VE+
Sbjct: 656 AEPAVTLRMGDLVEV 670
>gi|435854533|ref|YP_007315852.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
gi|433670944|gb|AGB41759.1| (p)ppGpp synthetase, RelA/SpoT family [Halobacteroides halobius DSM
5150]
Length = 722
Score = 316 bits (809), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 166/353 (47%), Positives = 232/353 (65%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V K +Y A+ AH+GQMR SG+P+L H + A +LA + + + A LLHD ++D +
Sbjct: 20 DLVKKGYYLAKEAHQGQMRVSGEPFLSHPLRVAQILAELELDVVSITAALLHDVVEDTEI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D I FGA + LV GV+KL+++ RE + A+ L MFLAMA D R VL
Sbjct: 80 TADEIEEEFGAEIRLLVNGVTKLNKIDFKTREEHQAAS------LRKMFLAMAEDIRVVL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ L KR+R A ETLEI+ PLA+RLG+S K +LE+L F++L PD+
Sbjct: 134 IKLADRLHNMRTLNYLSEEKRKRKANETLEIYAPLAHRLGMSRLKWELEDLSFRYLEPDK 193
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL++KL + EA + I+ LE L+D +I + GR K LYSI+ K++ K +
Sbjct: 194 YHELANKLAKNRAEREAYIEDVIDTLEGKLEDVDIQGKI-YGRPKHLYSINQKIINKNKS 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ LR+IV++ ++CYQ L ++H++W +PG++KDYI PK N YQSLHT V G
Sbjct: 253 FDEIYDLTALRVIVDSVKECYQVLGILHEIWNPMPGRIKDYIAMPKSNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHWRYK+G+ + F + + W R +L WQ
Sbjct: 313 KGEPLEIQIRTWEMHRTAEYGIAAHWRYKDGNPEDDDFE-KKISWLRQLLEWQ 364
>gi|254479350|ref|ZP_05092687.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
gi|214034716|gb|EEB75453.1| RelA/SpoT family protein [Carboxydibrachium pacificum DSM 12653]
Length = 720
Score = 310 bits (793), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 269/488 (55%), Gaps = 55/488 (11%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A +AH GQ+R SG+PY++H VE A +LA + + T +AAGLLHD ++D +
Sbjct: 22 DLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 82 TYDQLMEEFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 136 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 195
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E + + I ++Q L + I V GR K YSI+ KM + T
Sbjct: 196 YYDLVEKVAAKRKEREEFIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKT 254
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 FEEIYDLLAIRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 314
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
P EVQIRT EMH AE+G AAHWRYKEG F ++V W R +L WQ E
Sbjct: 315 KGEPFEVQIRTWEMHKTAEYGIAAHWRYKEGKTTEDEFDKKLV-WLRQLLEWQKE----- 368
Query: 556 RSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 615
+K P F F+ VFV + D +S P ST +D
Sbjct: 369 ---------LKDPKEFMETLKIDLFT--------DEVFVFTPKGDVIS---LPAGSTPID 408
Query: 616 LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDP----RCKLKMGDVVELTPAIPDKSL 671
+ + + E+ R+N V +LK GD+VE+ + P+K
Sbjct: 409 --------------FAYSIHTEIGHRMNGAKVNGRIVPINYQLKTGDIVEILVS-PNKDR 453
Query: 672 TEYREEIQ 679
R+ +Q
Sbjct: 454 GPSRDWLQ 461
>gi|20807650|ref|NP_622821.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Thermoanaerobacter tengcongensis MB4]
gi|20516195|gb|AAM24425.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Thermoanaerobacter tengcongensis MB4]
Length = 718
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 188/488 (38%), Positives = 269/488 (55%), Gaps = 55/488 (11%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A +AH GQ+R SG+PY++H VE A +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLLYKAYNFAVKAHEGQVRNSGEPYIVHPVEVAYILADLELDLTTIAAGLLHDVIEDTGV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMEEFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E + + I ++Q L + I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIIATIKQKLDEMGIPAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEEIYDLLAIRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
P EVQIRT EMH AE+G AAHWRYKEG F ++V W R +L WQ E
Sbjct: 313 KGEPFEVQIRTWEMHKTAEYGIAAHWRYKEGKTTEDEFDKKLV-WLRQLLEWQKE----- 366
Query: 556 RSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 615
+K P F F+ VFV + D +S P ST +D
Sbjct: 367 ---------LKDPKEFMETLKIDLFT--------DEVFVFTPKGDVIS---LPAGSTPID 406
Query: 616 LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDP----RCKLKMGDVVELTPAIPDKSL 671
+ + + E+ R+N V +LK GD+VE+ + P+K
Sbjct: 407 --------------FAYSIHTEIGHRMNGAKVNGRIVPINYQLKTGDIVEILVS-PNKDR 451
Query: 672 TEYREEIQ 679
R+ +Q
Sbjct: 452 GPSRDWLQ 459
>gi|345017525|ref|YP_004819878.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032868|gb|AEM78594.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 719
Score = 308 bits (788), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|167037441|ref|YP_001665019.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|320115854|ref|YP_004186013.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856275|gb|ABY94683.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|319928945|gb|ADV79630.1| RelA/SpoT family protein [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 719
Score = 308 bits (788), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAFILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|326390128|ref|ZP_08211689.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
gi|325993776|gb|EGD52207.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus JW
200]
Length = 719
Score = 307 bits (787), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|392941128|ref|ZP_10306772.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
gi|392292878|gb|EIW01322.1| LOW QUALITY PROTEIN: (p)ppGpp synthetase, RelA/SpoT family
[Thermoanaerobacter siderophilus SR4]
Length = 719
Score = 307 bits (786), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 226/359 (62%), Gaps = 19/359 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A AH GQMR SG+PY++H +E A +LA + + T +AAGLLHD ++D +
Sbjct: 20 ELIYKAYDFAVNAHEGQMRNSGEPYIVHPIEVAYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYDQLMENFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P++
Sbjct: 134 IKLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEE 193
Query: 378 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L K+ E F + ++T+ EKL++ + GR K YSI+ KM
Sbjct: 194 YYDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEVD-----GRPKHFYSIYKKMKT 248
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+ T ++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT
Sbjct: 249 QNKTFEQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTT 308
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
V G P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 309 VIGPKGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|159902750|ref|YP_001550094.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9211]
gi|159887926|gb|ABX08140.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9211]
Length = 776
Score = 306 bits (784), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 220/361 (60%), Gaps = 11/361 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF A R H+GQ RASGDPY++H V A LL IGA TV+AAGLLHD ++D
Sbjct: 66 EALIANAFDLAFRLHKGQFRASGDPYIVHPVAVADLLQEIGAGPTVIAAGLLHDAIEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
L+ + + FG VA LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 126 LTLEQLQSFFGNEVAGLVEGVTKLGGI------HVTNRTEAQAENLRKMFLAMASDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TLD+L K+QR A ET EI+ PLANRLGI +K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTLDSLQSDKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPD 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ ++V E + IE L L ++ + GR K L+ I KM +++
Sbjct: 240 SYREIQQEVVTKRSEREKRLDKTIELLRTKLLAAGLTEYEINGRPKHLFGIWGKMERQQK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+DI LR+IV N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 EFHEIYDIAALRIIVPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT EMH AEFG AAHW+YKEG S + W R ++ WQ E +
Sbjct: 360 RHR-PIEVQIRTPEMHQVAEFGIAAHWKYKEGGSPASGNT-ERFNWLRQLVEWQQEGGND 417
Query: 555 D 555
D
Sbjct: 418 D 418
>gi|123965455|ref|YP_001010536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
gi|123199821|gb|ABM71429.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9515]
Length = 769
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 166/363 (45%), Positives = 227/363 (62%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D ++KAF A +AH GQ+RASG+PY++H + A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QDLIVKAFKLAYQAHNGQLRASGEPYIIHPIAVADLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IALSEIEINFGLEVKVLVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ L +++R A+ET EI+ PLANRLGI+ +K +LE+L FK L PD
Sbjct: 174 LVKLADRLHNMRTIQWLNEERKERIARETREIYAPLANRLGINRFKWELEDLAFKFLEPD 233
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ L ++V E + + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYKNLKDQIVVKRSDREKRLDNTLNLMKENLVSSGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV N + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 QFSEIYDVAALRIIVSNLDSCYKALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
+ P+EVQIRT MH AEFG AAHW+YKEG SS + W R ++ WQ E K
Sbjct: 354 KHR-PIEVQIRTTSMHQIAEFGIAAHWQYKEGGSPASSNA-ERFNWLRQLVEWQQEGNEK 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|428208449|ref|YP_007092802.1| (p)ppGpp synthetase I SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
gi|428010370|gb|AFY88933.1| (p)ppGpp synthetase I, SpoT/RelA [Chroococcidiopsis thermalis PCC
7203]
Length = 763
Score = 305 bits (782), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 165/355 (46%), Positives = 226/355 (63%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H+GQ R SG+PY+ H V A LL +G S ++AAG LHD ++D ++
Sbjct: 44 LICRAFNFAYQLHQGQYRKSGEPYICHPVAVAGLLRDLGGGSAMIAAGFLHDVVEDTDVT 103
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FGA V LVEGV+KLS+ S E ++ +A+ MFLAMA D R +++
Sbjct: 104 LEDIEQQFGAEVKHLVEGVTKLSKFS----ETFSSKTERQAENFRRMFLAMAQDIRVIVV 159
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI T+K +LE+L FK+L P+ +
Sbjct: 160 KLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGTFKWELEDLTFKYLEPEAY 219
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ + E EA +T IE L+Q + +I + + GR K LY I+ KM +++
Sbjct: 220 RQIQDLVAEKRTDREARLTRVIEVLQQGMAQSHIQCIDISGRPKHLYGIYQKMQRQQKEF 279
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 280 HEIYDLAAIRIIVKTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVGFT 339
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSF--VLQMVEWARWVLTWQ 548
PLEVQIRT +MH AE+G AAHW+YKE G H+ F V + W R +L WQ
Sbjct: 340 GRPLEVQIRTIDMHHIAEYGIAAHWKYKETGGSSHTKFTPVDEKFTWLRQLLEWQ 394
>gi|206901091|ref|YP_002250691.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
gi|206740194|gb|ACI19252.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Dictyoglomus
thermophilum H-6-12]
Length = 727
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 162/351 (46%), Positives = 223/351 (63%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF AE AH+GQMR SG+PY+ H VE A +L +G TV+ AGLLHD L+D + +
Sbjct: 26 KAFIFAENAHKGQMRKSGEPYITHPVEVAKILMDLGMEETVIIAGLLHDVLEDTKVPKEE 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG V LVE ++KL +LS E A L MF+AMA D R ++IKLA
Sbjct: 86 IEKEFGKDVLSLVEAITKLEKLSFYPTE------AYRAQNLRKMFIAMAKDIRVIIIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ +
Sbjct: 140 DRLHNMQTLQYHDEEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYV 199
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ K+ E E + AIE +++ LK I+ V GR K LYSI+ KML++ + ++E+
Sbjct: 200 AKKVAETRKEREKFIEKAIEIIKEELKKTGINAEV-TGRAKHLYSIYQKMLRRGIEIEEM 258
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R+IV +E++CY+ L ++H LW VPG+ KDYI K N YQSLHT V P
Sbjct: 259 YDLLGVRVIVNSEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDGKP 318
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
LEVQIRT EMH AE+G AAHW YKE + + + + + W R +L WQ E
Sbjct: 319 LEVQIRTWEMHRVAEYGIAAHWLYKE-EIKKPDYFEEKLSWLRQLLEWQKE 368
>gi|145341928|ref|XP_001416051.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576275|gb|ABO94343.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 557
Score = 305 bits (781), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 191/511 (37%), Positives = 279/511 (54%), Gaps = 44/511 (8%)
Query: 194 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 253
+IF E V +AF ++H G P+ CV+TA+ LA +G ++ VA GLLHDTL
Sbjct: 29 EIFAEPTVREAFDFTAKSHAG---PGLGPHFDRCVDTAITLAKLGMDAKTVAVGLLHDTL 85
Query: 254 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 313
D + + + + F V LVE V+++ ++SKL R + E + M LAM DA
Sbjct: 86 DVTSSTKEDLRKRFSDEVVALVEDVTRVHRVSKLHRASGRVLDFNERAQFRAMLLAMTDA 145
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R V++KLA RL M L + P ++Q FA ETL I+ PLA RLGI + K +LE+L FK +
Sbjct: 146 RVVIVKLAARLIKMRNLASAPQSQQQAFADETLTIYAPLAARLGIFSVKNELEDLTFKWM 205
Query: 374 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
NP + ELS L + + +A+ KL++ L + + LCGR KS+YS++ KML K
Sbjct: 206 NPQAYAELSQTLDQ---RESIVAALNKLDEELSSRRAQVVDLCGRQKSVYSVYKKMLSKN 262
Query: 434 LTMDEIHDIYGLRLIV-------ENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQ 486
+++I D+ +R+IV E+E+ C + L + + V G+ KDYI PK NGYQ
Sbjct: 263 QKLEDIMDLRAIRIIVADGDNDAESEQTCRETLEIALSTFQSVEGRSKDYIANPKANGYQ 322
Query: 487 SLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVL 545
SLH VV E E+QIR+ MH AEFG AAHWRYKE + S+ V Q ++WAR++L
Sbjct: 323 SLHAVVRDENETTFEIQIRSASMHRTAEFGVAAHWRYKEHEKSATSAKVDQQIQWARFML 382
Query: 546 TWQCEAMSKDR-------SCVGNGDSIKPPCTFPSHADDCPFSYKP------QCSHDGPV 592
TWQ E + + V G +++ PC FP+H+ DC +S + + D P
Sbjct: 383 TWQNELDDQQKIRPARVAHAVDCGAALR-PCMFPTHSADCAYSREEGFCQSCEVEDDSPN 441
Query: 593 FVIMIENDKMSVQEFPTSSTVMDL-LERAGRGSSRWSPYGFPLKEELR---PRLNHKAVG 648
++I + + ++V+E +ST+ DL LE A P G E R R+N K++
Sbjct: 442 YIITVVDGAVAVREIAQNSTLADLKLEDAH------VPGGARSSEFYRVSSVRVNKKSIA 495
Query: 649 DPRCK---LKMGDVVELTPA---IPDKSLTE 673
LKMGDV+E+ P+KS E
Sbjct: 496 TANASSTTLKMGDVIEVNRTRILSPNKSWDE 526
>gi|297544507|ref|YP_003676809.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842282|gb|ADH60798.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 719
Score = 304 bits (779), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + K++ A AH GQMR SG+PY++H +E + +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYEQLLEKFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E ++ + I +++ LK+ I V GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVAAKRKEREELIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKS 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FDQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDKFD-QKLSWLRQLLEWQKE 366
>gi|397906545|ref|ZP_10507345.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
gi|397160502|emb|CCJ34682.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Caloramator
australicus RC3]
Length = 722
Score = 304 bits (779), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 164/360 (45%), Positives = 226/360 (62%), Gaps = 18/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ AE+AH GQ+R SGDPY+LH VE A++L +G ++ + A LLHD ++D L
Sbjct: 19 EMIKKAYNVAEKAHEGQLRESGDPYILHPVEVAIILVEMGLDTDAICAALLHDVVEDTHL 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ + R F +ADLV+GV+KL ++ ++E +A+ + + +AMA D R +L
Sbjct: 79 SYEDVKREFNESIADLVDGVTKLGKIEYKSKEEQ------QAENIRKVLIAMAKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A+ETL+I+ PLA+RLGIS K +LE+L ++L+PD+
Sbjct: 133 IKLADRLHNMRTLKYLPPEKQKAKAEETLDIYAPLAHRLGISKIKWELEDLSLRYLHPDE 192
Query: 378 HTELSSKL----VECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ EL SK+ E E I EKLEQA +I GR K YSI+ KM
Sbjct: 193 YYELVSKVQKKRAEREKEINEIKNILQEKLEQAGIKADID-----GRPKHFYSIYRKMHY 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K T D+I D+ +R+IV+ +DCY AL +VH LW +PG+ KDYI PK N YQSLH+
Sbjct: 248 KNKTFDQIFDLLAVRVIVDTVKDCYAALGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHST 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
V G P E+QIRT EMH AE+G AAHW+YKEG + + + W R +L Q EA
Sbjct: 308 VIGPNGQPFEIQIRTWEMHRTAEYGIAAHWKYKEGINNKELDIDEKLHWLRQILELQKEA 367
>gi|110739789|dbj|BAF01801.1| RSH3 [Arabidopsis thaliana]
Length = 197
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/197 (74%), Positives = 163/197 (82%), Gaps = 4/197 (2%)
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGNGDS 564
RTKEMHLQAEFGFAAHWRYKEGDC+HSSFVLQMVEWARWV+TW E MSKD S + + +
Sbjct: 1 RTKEMHLQAEFGFAAHWRYKEGDCKHSSFVLQMVEWARWVVTWHFETMSKDGSSICSSE- 59
Query: 565 IKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERAGRGS 624
P C+FPSHA+DCPFSYKP + +GPV+VI+IEN+KM+VQEFP +STV DLL RAG GS
Sbjct: 60 --PLCSFPSHAEDCPFSYKPSGNQEGPVYVIVIENEKMTVQEFPENSTVSDLLRRAGPGS 117
Query: 625 SRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEIQRMYER 684
SRWS Y P KEELRPRLN V D +CKLKMGDVVELTPAIPDKSLTEYREEIQRMY+R
Sbjct: 118 SRWSMYSIPAKEELRPRLNQTPVSDLKCKLKMGDVVELTPAIPDKSLTEYREEIQRMYDR 177
Query: 685 GLAVSNTGPAVT-SMVG 700
GLA S A T +MVG
Sbjct: 178 GLAFSRPHRAATGTMVG 194
>gi|300914191|ref|ZP_07131507.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307724574|ref|YP_003904325.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter sp. X513]
gi|300889126|gb|EFK84272.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X561]
gi|307581635|gb|ADN55034.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter sp. X513]
Length = 719
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 223/354 (62%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH GQ+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++
Sbjct: 21 LIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVT 80
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +LI
Sbjct: 81 YGQLLEYFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILI 134
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD++
Sbjct: 135 KLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDEY 194
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 195 YDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTF 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 EQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPK 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 314 GEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTSEDEFD-QKLSWLRQLLEWQKE 366
>gi|217967359|ref|YP_002352865.1| (p)ppGpp synthetase I SpoT/RelA [Dictyoglomus turgidum DSM 6724]
gi|217336458|gb|ACK42251.1| (p)ppGpp synthetase I, SpoT/RelA [Dictyoglomus turgidum DSM 6724]
Length = 727
Score = 304 bits (778), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/351 (46%), Positives = 224/351 (63%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF AE AH+GQ+R SG+PY+ H VE A +L +G TVV AGLLHD L+D ++ +
Sbjct: 26 RAFIFAENAHKGQVRKSGEPYITHPVEVAKILMNLGMEETVVIAGLLHDVLEDTNVTKEE 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG V LVE ++KL +LS E A L MF+AMA D R ++IKLA
Sbjct: 86 IEKEFGKDVLSLVEAITKLEKLSFYPTE------AYRAQNLRKMFIAMAKDIRVIIIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL K++R AKETLEI+ PLA+RLG+ K +LE+L F++L P+++ +
Sbjct: 140 DRLHNMQTLQYHEEEKQKRIAKETLEIYAPLAHRLGVWDIKWRLEDLAFRYLEPEKYHYV 199
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ K+ E E + AIE +++ LK I+ V GR K LYSI+ KML++ + ++E+
Sbjct: 200 AKKVAETRKEREKFIEKAIEIIKEELKKAGINAEV-TGRAKHLYSIYQKMLRRGIEIEEM 258
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R+IV +E++CY+ L ++H LW VPG+ KDYI K N YQSLHT V P
Sbjct: 259 YDLLGVRVIVNSEKECYEVLGIIHNLWKPVPGRFKDYIANKKSNNYQSLHTTVIAMDGKP 318
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
LEVQIRT EMH AE+G AAHW YKE + SF + + W R +L WQ E
Sbjct: 319 LEVQIRTWEMHRIAEYGIAAHWLYKEEIKKPDSFE-EKLSWLRQLLEWQKE 368
>gi|28211806|ref|NP_782750.1| GTP pyrophosphokinase [Clostridium tetani E88]
gi|28204248|gb|AAO36687.1| putative GTP pyrophosphokinase [Clostridium tetani E88]
Length = 731
Score = 303 bits (777), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/360 (43%), Positives = 229/360 (63%), Gaps = 19/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A AH+ Q R SG+PY++H VE A +LA +G ++ + AGLLHD ++D
Sbjct: 19 ELVKKAYEIANGAHKQQKRESGEPYIVHPVEVACILADMGMDADTIVAGLLHDVIEDTEY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + R F VADLVEGV+KL ++ ++E +AD + M LAMA D R +L
Sbjct: 79 TYEDVEREFNKQVADLVEGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAQDVRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ AKET +I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGISKIKWELEDLAFRYINPNE 192
Query: 378 H----TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ E++ + VE + E +V + LE + +I GR K YSI+ KM+
Sbjct: 193 YYSFVKEIAERRVERIAYIELIVNELTKSLEGSGIKSDIE-----GRPKHFYSIYRKMIN 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K T+D+I D+ +R++V+ +DCY AL +VH ++ +PG+ KDYI PK N YQSLH+
Sbjct: 248 KNKTLDQIFDLTAIRILVDTVKDCYAALGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHST 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
V G P E+QIRT EMH AE+G AAHW+YKEG + ++ L++ W R +L WQ E
Sbjct: 308 VIGPQGKPFEIQIRTFEMHKTAEYGIAAHWKYKEGITEENNMELKLT-WLREILEWQRET 366
>gi|33860751|ref|NP_892312.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
gi|33633693|emb|CAE18650.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus subsp. pastoris str. CCMP1986]
Length = 769
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 237/388 (61%), Gaps = 13/388 (3%)
Query: 175 EGNLETYAKEFLANAQLKHKIFR--EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 232
E N+ + E + N ++ +K +D ++KAF A AH GQ+RASG+PY++H + A
Sbjct: 35 EINIPNWLLEIIQNYEVSNKKNNSNQDLIVKAFKLAYEAHNGQLRASGEPYIIHPLAVAD 94
Query: 233 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 292
LL IGA+S+VVAAGLLHD ++D ++ I FG V LVEGV+KL + NN
Sbjct: 95 LLKEIGASSSVVAAGLLHDVVEDTGIALSEIEVNFGLEVKVLVEGVTKLGGI----HFNN 150
Query: 293 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 351
+A+ L MFLAMA D R VL+KLADRLHNM T+ L +++R A+ET EI+ P
Sbjct: 151 RTE--AQAENLRKMFLAMASDIRVVLVKLADRLHNMRTIQWLNEERKERIARETREIYAP 208
Query: 352 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKN 409
LANRLGI+ +K +LE+L FK L P+++ L ++ V+ D E + + +++ L
Sbjct: 209 LANRLGINRFKWELEDLAFKFLEPEEYKNLKDQIAVKRSDREKRLNVTLNLMKENLVSSG 268
Query: 410 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 469
+ + GR K LY I KM +++ EI+D+ LR+IV N + CY+AL VVH + +
Sbjct: 269 LVNFEITGRPKHLYGIWSKMERQQKQFGEIYDVAALRIIVSNTDSCYKALAVVHDTFRPI 328
Query: 470 PGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
PG+ KDYI PK NGYQSLHT V G P+EVQIRT MH AEFG AAHW+YKEG
Sbjct: 329 PGRFKDYIGLPKPNGYQSLHTSVIGRHR-PIEVQIRTSSMHQIAEFGIAAHWQYKEGGSP 387
Query: 530 HSSFVLQMVEWARWVLTWQCEAMSKDRS 557
SS + W R ++ WQ E KD +
Sbjct: 388 ASSNA-ERFNWLRQLVEWQQEGNEKDHN 414
>gi|289578226|ref|YP_003476853.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacter italicus Ab9]
gi|289527939|gb|ADD02291.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter italicus Ab9]
Length = 719
Score = 302 bits (774), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + K++ A AH GQMR SG+PY++H +E + +LA + + T +AAGLLHD ++D +
Sbjct: 20 DLIYKSYDFAVNAHDGQMRNSGEPYIVHPIEVSYILADLELDITTIAAGLLHDVIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +L
Sbjct: 80 TYEQLLEKFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKYLPPDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPDE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ E ++ + I +++ LK+ I V GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVAAKRKEREELIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKS 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I+D+ +R+IV ++CY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FDQIYDLLAVRIIVNTVKECYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDKFD-QKLSWLRQLLEWQKE 366
>gi|393200222|ref|YP_006462064.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|406667432|ref|ZP_11075190.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
gi|327439553|dbj|BAK15918.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Solibacillus silvestris StLB046]
gi|405384800|gb|EKB44241.1| GTP pyrophosphokinase [Bacillus isronensis B3W22]
Length = 731
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 232/357 (64%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV+KA+ A+ AH+ Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D ++
Sbjct: 27 FVVKAYEVAKEAHKEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTEVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LV+GV+KL ++ +++E +A+ MF+AMA D R +LI
Sbjct: 87 REDLVNEFSEEVAKLVDGVTKLGKIKYMSKEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R ++ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISQETLEIFAPLAHRLGISKVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ S + + DE A + + ++++ LK+ I + GR K LYSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMDEINSQLKEVEIEADIF-GRPKHLYSIYRKMVLQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V++ +DCY + ++H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVDSIKDCYAVIGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPY 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AEFG AAHW YKEG Q++ + Q + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTKEMHKIAEFGIAAHWAYKEGKTVEQNAETIDQKLTWFREILEFQNES 376
>gi|254424339|ref|ZP_05038057.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
gi|196191828|gb|EDX86792.1| RelA/SpoT family protein [Synechococcus sp. PCC 7335]
Length = 771
Score = 302 bits (773), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/356 (46%), Positives = 226/356 (63%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V +AF A + H+GQMRASG+PY+ H V A LL ++G +S ++AAG LHD ++D ++
Sbjct: 61 LVCQAFEYAYQLHKGQMRASGEPYIAHPVAVAGLLRSLGGDSAMIAAGFLHDVVEDTEVT 120
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA V LVEGV+KLS+ E ++ ++ +A+ MFLAMA D R +++
Sbjct: 121 ADEIGAIFGAEVRHLVEGVTKLSKF-----EFDSKTEQ-QAENFRRMFLAMAKDIRVIVV 174
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R A+ETLEIF PLANRLGI +K +LE+LCFK+L P+ +
Sbjct: 175 KLADRLHNMRTLQHLRPDKQVRIARETLEIFAPLANRLGIGRFKWELEDLCFKYLEPEAY 234
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL+ +V+ EA + L++ + I + R K LYSI+ KM +++
Sbjct: 235 KELTQLIVDKRTDREARLQQVSHVLKEGISKLGIKCKDVSSRPKHLYSIYKKMQRQQKEF 294
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+DI +RL+V +++CY+AL V H L+ +PG+ KDYI PK N YQSLHTVV G
Sbjct: 295 QEIYDIAAIRLLVNTKDECYRALAVAHDLYRPIPGRFKDYIGLPKPNRYQSLHTVVMGPH 354
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE H++ + W R +L WQ E
Sbjct: 355 GRPIEVQIRTVEMHHIAEYGIAAHWKYKESGNSHTTITQDDEKFTWLRQLLDWQNE 410
>gi|402837012|ref|ZP_10885543.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
gi|402270028|gb|EJU19297.1| putative GTP diphosphokinase [Mogibacterium sp. CM50]
Length = 732
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 159/375 (42%), Positives = 233/375 (62%), Gaps = 13/375 (3%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
+EF+A + + + V+KAF A R H GQ+R SG+PY++H + + +LA G ++
Sbjct: 10 TEEFIAQLKSINPKYDLPLVVKAFEIANRLHSGQLRKSGEPYIIHPIAVSFILATFGMDT 69
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AGL+HD ++D + + + FG +A LV+GV+KL + ++E ++A+
Sbjct: 70 ETIIAGLMHDVVEDTPYTREQLVEDFGEEIALLVDGVTKLGNIKYDSKEE------LQAE 123
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MFLAM+ D R ++IKLADRLHNM TL+ +P KR+ A ETLEI+ PLA RLGI +
Sbjct: 124 NFRKMFLAMSKDIRVLIIKLADRLHNMRTLEYMPTTKREEKALETLEIYAPLAGRLGIYS 183
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+L +L+P ++ ELS+K+ + EA+V I +++ L NI + V GR
Sbjct: 184 IKFELEDLALMYLHPTEYRELSNKVNKRRQSREAVVQQLITEIKAGLDKANIEYEV-TGR 242
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K LYSI+ KM+ +K +DEI D+ +R+IV+N +DCY L +VH W +PG+ KDYI
Sbjct: 243 SKHLYSIYKKMVIQKKQLDEIFDLTAIRVIVDNIKDCYATLGLVHTRWTPIPGRFKDYIA 302
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQ 536
PK N YQS+HT V + P E+QIRTKEMH AE+G AAHW+YKEG D + + +
Sbjct: 303 MPKPNMYQSIHTTVLDDEGNPFEIQIRTKEMHRIAEYGIAAHWKYKEGKSDSKQNEDEKK 362
Query: 537 MVEWARWVLTWQCEA 551
+ W R L WQ E
Sbjct: 363 LA-WLRQALEWQKET 376
>gi|256752957|ref|ZP_05493784.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748165|gb|EEU61242.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 493
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 156/354 (44%), Positives = 223/354 (62%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH GQ+R SG+PY++H +E A +LA + + T +AAGLLHD ++D ++
Sbjct: 21 LIYKAYDFAVNAHDGQIRNSGEPYIIHPIEVAYILAELELDITTIAAGLLHDVIEDTDVT 80
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y + FG +ADLV+GV+KL ++ ++ +A+ + M +AMA D R +LI
Sbjct: 81 YGQLLEYFGKEIADLVDGVTKLGKIEYKSKVEQ------QAENMRKMLIAMAKDIRVILI 134
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LPL K++ A+ETLEI+ P+A+RLGIS K +LE+LC ++L+P+++
Sbjct: 135 KLADRLHNMRTLKYLPLDKQKEKAEETLEIYAPIAHRLGISKIKWELEDLCLRYLHPEEY 194
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K+ E + + I +++ LK+ I V GR K YSI+ KM + T
Sbjct: 195 YDLVEKVAAKRKEREEFIQNIITTIKEKLKEMGIQAEV-DGRPKHFYSIYKKMKTQNKTF 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
++I+D+ +R+IV +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 EQIYDLLAVRIIVNTVKDCYGVLGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPK 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG F Q + W R +L WQ E
Sbjct: 314 GEPFEIQIRTWEMHKTAEYGIAAHWKYKEGKTTEDEFD-QKLSWLRQLLEWQKE 366
>gi|312143973|ref|YP_003995419.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium hydrogeniformans]
gi|311904624|gb|ADQ15065.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium hydrogeniformans]
Length = 715
Score = 300 bits (768), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 233/353 (66%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D VIKA+ A++AH GQ R SG+P++ H + AM+LA + + + A ++HD ++D +
Sbjct: 20 DLVIKAYNYAKKAHEGQYRVSGEPFVDHPLGVAMILADLELDIISIVASMMHDVVEDTEI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG VA +VEGV+KL+++ +E+ +A+ L MF+AMA D R VL
Sbjct: 80 TSEDIRKEFGDEVAHIVEGVTKLTRMQFKTKEDQ------QAESLRKMFVAMAEDIRVVL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ L KR+ ++ETLEI+ PLA+RLG+S K +LE+LCF++L PD
Sbjct: 134 IKLADRLHNMRTLNYLKKEKRKEKSRETLEIYAPLAHRLGMSKLKWELEDLCFRYLKPDM 193
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+S K+ + E + AIEKL++ L+ +I + GR K L+SI+ KM +K++
Sbjct: 194 YYEVSHKVQTNREQREKSIQEAIEKLKETLEKHDIESEIY-GRPKHLFSIYNKMKRKEVE 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R++VEN ++CY+ L ++H++W +PG+ KDYI PK N YQSLHT V
Sbjct: 253 FDEIYDLTAVRVLVENVKECYEVLGIIHEIWKPMPGRFKDYIAMPKSNMYQSLHTTVIAP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT +MH AE+G AAHWRYKEG F + + W R +L WQ
Sbjct: 313 SGDPLEVQIRTYDMHKTAEYGIAAHWRYKEGKVGDEKFE-EKLSWLRRLLEWQ 364
>gi|411116988|ref|ZP_11389475.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
gi|410713091|gb|EKQ70592.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoriales
cyanobacterium JSC-12]
Length = 751
Score = 300 bits (767), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/360 (45%), Positives = 228/360 (63%), Gaps = 17/360 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ RASG+PY++H V A LL +G S ++AAG LHD ++D +
Sbjct: 42 DLICRAFDFAYQLHQGQYRASGEPYIIHPVAVAGLLRDLGGGSVMIAAGFLHDVVEDTDV 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ D + FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 102 TADELETLFGKEVRTLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 154
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ LP KR++ A ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 155 VVKLADRLHNMRTLEHLPDAKRRQIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPD 214
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ + + E EA +++ + L + L I + GR K LY I+ KM +++
Sbjct: 215 AYRNVQELVAEKRTDREARLSNIVSALRERLTQVGIRVFDISGRPKHLYGIYQKMQRQQK 274
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+IV++ E+CY++L +VH ++ +PG+ KDYI PK N YQSLHTVV G
Sbjct: 275 GYEEIYDVAAVRIIVDSNEECYRSLAIVHDMFRPIPGRFKDYIGLPKPNRYQSLHTVVIG 334
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE +SS L ++ W R +L WQ +
Sbjct: 335 NTGRPLEVQIRTLEMHHVAEYGIAAHWKYKE--TGNSSTPLTGMDEKFTWLRQLLDWQSD 392
>gi|169829352|ref|YP_001699510.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
gi|168993840|gb|ACA41380.1| GTP pyrophosphokinase [Lysinibacillus sphaericus C3-41]
Length = 731
Score = 299 bits (766), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 230/358 (64%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ S + + DE A + + + +++ L + I V GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPY 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTKEMHKIAEYGIAAHWAYKEGKKADHQKQN-VDQKLTWFREILEFQNES 376
>gi|126653971|ref|ZP_01725808.1| GTP pyrophosphokinase [Bacillus sp. B14905]
gi|126589528|gb|EAZ83670.1| GTP pyrophosphokinase [Bacillus sp. B14905]
Length = 731
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 166/358 (46%), Positives = 230/358 (64%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ S + + DE A + + + +++ L + I V GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLDNVMAEMKSQLNEVEIDADVY-GRPKHIYSIYRKMVLQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPY 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTKEMHKIAEYGIAAHWAYKEGRKVDHQKQN-VDQKLTWFREILEFQNES 376
>gi|153955745|ref|YP_001396510.1| RelA protein [Clostridium kluyveri DSM 555]
gi|146348603|gb|EDK35139.1| RelA [Clostridium kluyveri DSM 555]
Length = 726
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 227/359 (63%), Gaps = 15/359 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E V KA+Y A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D
Sbjct: 18 EKMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTE 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 316
S + + R F VA+LVEGV+KL ++ +E +AD + M LAM+D R +
Sbjct: 78 FSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL LP+ K++ AKET +I+ PLA RLG+S K +LE+L F+++N +
Sbjct: 132 LIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQN 191
Query: 377 QH----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
++ ++S K VE E + I+KL + ++ I+ + GR K YSI+ KM+KK
Sbjct: 192 EYYFIVRKISEKRVE--REKYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKK 248
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T+D+I D+ +R++V +DCY AL + H ++ VPG+ KDYI PK N YQSLHT V
Sbjct: 249 NKTIDQIFDLTAVRILVSTMKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTV 308
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG + + + + W R +L WQ E
Sbjct: 309 IGPQGKPFEIQIRTFEMHKTAEYGIAAHWKYKEG-ADTAEDIDKKLTWLREMLEWQRET 366
>gi|219856114|ref|YP_002473236.1| hypothetical protein CKR_2771 [Clostridium kluyveri NBRC 12016]
gi|219569838|dbj|BAH07822.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 733
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 227/359 (63%), Gaps = 15/359 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E V KA+Y A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D
Sbjct: 25 EKMVKKAYYFADEAHKKQKRESGEPYIMHPVEVACILAEMGMDTSTIVAGLLHDIVEDTE 84
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 316
S + + R F VA+LVEGV+KL ++ +E +AD + M LAM+D R +
Sbjct: 85 FSREDVSREFSVEVANLVEGVTKLGKIEYKTKEEQ------QADNVRKMLLAMSDDIRVI 138
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL LP+ K++ AKET +I+ PLA RLG+S K +LE+L F+++N +
Sbjct: 139 LIKLADRLHNMRTLKFLPVKKQKEKAKETFDIYAPLAYRLGMSKIKWELEDLAFRYINQN 198
Query: 377 QH----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
++ ++S K VE E + I+KL + ++ I+ + GR K YSI+ KM+KK
Sbjct: 199 EYYFIVRKISEKRVE--REKYIEQIIKKLRENMQKAGIN-TDIEGRPKHFYSIYRKMVKK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T+D+I D+ +R++V +DCY AL + H ++ VPG+ KDYI PK N YQSLHT V
Sbjct: 256 NKTIDQIFDLTAVRILVSTMKDCYAALGIAHTIYKPVPGRFKDYIAMPKANMYQSLHTTV 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG + + + + W R +L WQ E
Sbjct: 316 IGPQGKPFEIQIRTFEMHKTAEYGIAAHWKYKEG-ADTAEDIDKKLTWLREMLEWQRET 373
>gi|313672627|ref|YP_004050738.1| (p)ppGpp synthetase I SpoT/RelA [Calditerrivibrio nitroreducens DSM
19672]
gi|312939383|gb|ADR18575.1| (p)ppGpp synthetase I, SpoT/RelA [Calditerrivibrio nitroreducens
DSM 19672]
Length = 710
Score = 299 bits (765), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 163/361 (45%), Positives = 226/361 (62%), Gaps = 19/361 (5%)
Query: 192 KHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHD 251
K+ I + + KA+ A + HRGQ+R SG+PYL H + A++LA + + V AG+LHD
Sbjct: 18 KNNITNIEKIHKAYVYAAQKHRGQLRKSGEPYLSHPLNVALILANMNMDLDTVTAGILHD 77
Query: 252 TLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA 311
TL+D +Y+ + FG VA LV+GVSK+ ++S + E A + M ++M+
Sbjct: 78 TLEDTDATYEELAELFGEDVAFLVDGVSKIGKISFKSSEEKMA------ENFRKMLISMS 131
Query: 312 -DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCF 370
D R ++IKLADRLHNM TLD L K+QR AKET+EI+ PLA+RLGI+ K +LE+L F
Sbjct: 132 KDVRVIVIKLADRLHNMRTLDYLSEEKKQRIAKETMEIYAPLAHRLGIAWIKWELEDLSF 191
Query: 371 KHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 428
+ LNPD++ E+ + KL EA + I L+ LK+ NI V GR K YSI+ K
Sbjct: 192 RILNPDKYYEIYNLVKLKRSEREAYLNQVINLLDAHLKNVNIQAEV-TGRPKHFYSIYSK 250
Query: 429 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 488
M+KKK + DEI+D+ +R+IV+ DCY L ++H LW +PG+ KDYI PK N YQSL
Sbjct: 251 MIKKKTSFDEIYDLLAVRVIVKTVSDCYATLGIIHNLWKPIPGRFKDYIAMPKANMYQSL 310
Query: 489 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC----QHSSFVLQMVEWARWV 544
HT V G + +E+QIRT+EMH AE G AAHW+YKEG ++FV W R +
Sbjct: 311 HTTVVGPNGLNVEIQIRTEEMHRIAEEGIAAHWKYKEGKVFNPKDDTTFV-----WLRQL 365
Query: 545 L 545
L
Sbjct: 366 L 366
>gi|385799597|ref|YP_005836001.1| (p)ppGpp synthetase I SpoT/RelA [Halanaerobium praevalens DSM 2228]
gi|309388961|gb|ADO76841.1| (p)ppGpp synthetase I, SpoT/RelA [Halanaerobium praevalens DSM
2228]
Length = 715
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 227/353 (64%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ AE+AH+ Q R SG+P++ H + +++LA + + + + LLHD ++D +
Sbjct: 20 DLVKKAYSYAEKAHKEQYRVSGEPFVEHPLGVSIILAELELDIVSIVSSLLHDVVEDTSV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S I + FGA VA +V+GV+KL+++ + + +A+ L MF+AMA D R VL
Sbjct: 80 SSQEIEKEFGAEVAHIVDGVTKLTRMQFKTKADQ------QAESLRKMFVAMAEDIRVVL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ L KR+ ++ET+EI+ PLA+RLG+S K +LE+L F++L PD
Sbjct: 134 IKLADRLHNMRTLNYLKKAKRKEKSRETIEIYAPLAHRLGMSKIKWELEDLSFRYLKPDM 193
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+S K+ E + AIEKL L+ +I + GR K LYSI+ KM +K++
Sbjct: 194 YYEISHKVQANRKQREKDIKEAIEKLNLTLESHSIEADI-YGRPKHLYSIYNKMKRKEVE 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R++VEN ++CY+ L V+H++W +PG+ KDYI PK N YQSLHT V
Sbjct: 253 FDEIYDLTAVRVLVENVKECYEVLGVLHEIWKPMPGRFKDYIAMPKSNMYQSLHTTVIAP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHWRYKEG F + + W R +L WQ
Sbjct: 313 NGDPLEVQIRTYEMHKTAEYGIAAHWRYKEGKVGDEKFE-EKLSWLRRLLEWQ 364
>gi|299535673|ref|ZP_07048994.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|424739057|ref|ZP_18167479.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
gi|298728873|gb|EFI69427.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZC1]
gi|422946922|gb|EKU41324.1| GTP pyrophosphokinase [Lysinibacillus fusiformis ZB2]
Length = 731
Score = 298 bits (764), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 165/358 (46%), Positives = 230/358 (64%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A AH Q R+SG+PY++H V+ A +LA + + VAAG LHD ++D +
Sbjct: 27 FVKKAYELARDAHIEQFRSSGEPYIIHPVQVAGILAELQMDPETVAAGFLHDVVEDTDFT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R FG VA LV+GV+KL ++ L++E +A+ MF+AMA D R +LI
Sbjct: 87 RDDLVREFGEEVAVLVDGVTKLGKIKYLSKEAQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R +KETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISKETLEIFAPLAHRLGISTVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ S + + DE A + + + +++ L + I + GR K +YSI+ KM+ +K
Sbjct: 201 YRIVSLMKKKRDEREAYLENVMAEMKSQLNEVEIDADIY-GRPKHIYSIYRKMVLQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPY 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---DCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AE+G AAHW YKEG D Q + V Q + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTKEMHKIAEYGIAAHWAYKEGKNVDHQKQN-VDQKLTWFREILEFQNES 376
>gi|257055543|ref|YP_003133375.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
gi|256585415|gb|ACU96548.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora viridis
DSM 43017]
Length = 812
Score = 298 bits (763), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 225/354 (63%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 112 RAYDTAEELHRGQHRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 171
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 172 LTEDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 223
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG+ST K +LE+L F L P ++ E+
Sbjct: 224 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMSTVKWELEDLAFAILQPKKYDEI 283
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L + L++ I+ V GR K YSIH KM+ + +D+I
Sbjct: 284 VRLVADRAPSRDTYLRWVIGELTRQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 342
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G P
Sbjct: 343 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRYGVYQSLHTTVIGPDGKP 402
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H +++ E W R +L WQ EA
Sbjct: 403 LEVQIRTHEMHRTAEYGIAAHWRYKETKGTHKGNAVEIDEMAWMRQLLDWQREA 456
>gi|331269250|ref|YP_004395742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium botulinum BKT015925]
gi|329125800|gb|AEB75745.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium botulinum BKT015925]
Length = 730
Score = 298 bits (763), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 228/358 (63%), Gaps = 11/358 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D +IKA+ AE AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAENAHKEQKRVSGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+Y+ + R F + VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLNPN 191
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L K+ E E + I +L + L+D I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELSEKLEDAGIKSEI-AGRPKHFYSIYRKMVIKNK 250
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIG 310
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
P E+QIRT +MH +E+G AAHW+YKEG ++S + + W R VL WQ E
Sbjct: 311 PQGKPFEIQIRTYDMHNTSEYGIAAHWKYKEGFSKNSDNDFEAKLAWLREVLEWQRET 368
>gi|78044718|ref|YP_361036.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
gi|77996833|gb|ABB15732.1| GTP pyrophosphokinase [Carboxydothermus hydrogenoformans Z-2901]
Length = 716
Score = 297 bits (760), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E+ + KA+ A AH GQ RASG+ Y+ H + A +LA + + +AAGLLHD ++D
Sbjct: 20 EELIKKAYNFAAEAHAGQKRASGEDYITHPLAVAFILAGLQMDDETIAAGLLHDVVEDTA 79
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ + I R FG VA+LV+GV+KLS++ +E + + L MFLAMA D R +
Sbjct: 80 YTIEDIAREFGEEVANLVDGVTKLSRIEFKNKEEQ------QVENLRKMFLAMAKDIRVI 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL K++ A+ETLEIF PLA+RLGI K +LE+L F++L+PD
Sbjct: 134 LIKLADRLHNMRTLKYHNPEKQKEIARETLEIFAPLAHRLGIYRIKWELEDLAFRYLDPD 193
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ K+ + E + I LE+ LK NI + GR K LYSI KM +++
Sbjct: 194 NYYDIVEKIAKTRAKREQYIQQVISILEEKLKSYNIKAKI-EGRPKHLYSIFQKMREQQK 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
E++D+ +R+IVE+ DCY L ++H +W VPG+ KDYI PK N YQSLHT V G
Sbjct: 253 DFSEVYDVMAVRVIVESVRDCYTVLGIIHTMWIPVPGRFKDYIAMPKSNMYQSLHTTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT EMH AE+G AAHWRYKEG F + + W R +L WQ E
Sbjct: 313 PFGEPLEIQIRTFEMHRTAEYGIAAHWRYKEGGKGDKKFD-EKLSWLRQILEWQRE 367
>gi|221633684|ref|YP_002522910.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
gi|221157017|gb|ACM06144.1| GTP pyrophosphokinase [Thermomicrobium roseum DSM 5159]
Length = 720
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 172/385 (44%), Positives = 234/385 (60%), Gaps = 25/385 (6%)
Query: 182 AKEFLA---NAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
A EFL NA L + + AF A AH G R SG+PYL H + A++LA +
Sbjct: 2 APEFLKRLPNADL-------ELIHHAFELARSAHAGMRRRSGEPYLSHPLAVALILADLQ 54
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS--- 295
+ +AA LLHD L+D ++ + + FG VA LV+GV+KL ++ +L+ EN S
Sbjct: 55 LDQETIAAALLHDVLEDTDVTIEQLRERFGPRVARLVDGVTKLGKI-RLSPENEPVSLER 113
Query: 296 -KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 353
K +A+ L M LAMA D VLIKLADRLHNM TLD LP K++R A+ET+EI+ PLA
Sbjct: 114 EKIRQAESLRKMLLAMAEDVGVVLIKLADRLHNMRTLDHLPPEKQRRIARETMEIYAPLA 173
Query: 354 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNI 410
NRLGI K +LE+L FK+L P Q E ++ +E E + IE++++AL D I
Sbjct: 174 NRLGIGQLKAELEDLAFKYLEP-QTYETIARALESRGHDREQYLQEVIEQVKRALADAGI 232
Query: 411 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 470
+V GR K + SI KM +K+ DEI+D+ G+R+IV+ + DCY AL ++H +W +P
Sbjct: 233 RAVV-TGREKHIASIARKMREKQRNFDEIYDVLGIRVIVDEQRDCYAALAIIHGMWHPIP 291
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---D 527
G+ DYI PK N Y+SLHT V G +PLEVQIRT EMH +AE+G AAHWRYKE D
Sbjct: 292 GQFDDYIANPKENLYRSLHTAVIGPRGIPLEVQIRTHEMHREAEYGIAAHWRYKEQLKPD 351
Query: 528 CQHSSFVLQMVEWARWVLTWQCEAM 552
S + + W R +L W+ E +
Sbjct: 352 SGDRSIEAK-IAWFRQILEWRDELL 375
>gi|168187498|ref|ZP_02622133.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
gi|169294579|gb|EDS76712.1| guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolase [Clostridium
botulinum C str. Eklund]
Length = 729
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 225/357 (63%), Gaps = 10/357 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D +IKA+ A+ AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAKNAHKKQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+Y+ + R F + VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVERDFNSEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L K+ E E + I +L++ L + I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVIKNK 250
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIG 310
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRT EMH +E+G AAHW+YKEG+ + W R VL WQ E
Sbjct: 311 PQGKPFEIQIRTYEMHYTSEYGIAAHWKYKEGEKNSDKDFEAKLAWLREVLEWQRET 367
>gi|428223952|ref|YP_007108049.1| (p)ppGpp synthetase I SpoT/RelA [Geitlerinema sp. PCC 7407]
gi|427983853|gb|AFY64997.1| (p)ppGpp synthetase I, SpoT/RelA [Geitlerinema sp. PCC 7407]
Length = 763
Score = 297 bits (760), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 164/355 (46%), Positives = 215/355 (60%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ RASG+PY+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 49 LICRAFCFAYELHEGQFRASGEPYIAHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 108
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
D I FG V +VEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 109 ADEIEERFGPEVRQMVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 161
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI K +LE+L FK+L PD
Sbjct: 162 VKLADRLHNMRTLEHLPDVKRRRIAMETREIFAPLANRLGIGRVKWELEDLAFKYLEPDA 221
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ S + E E + + L + I + + GR K LYSI+ KM ++
Sbjct: 222 YRQMQSLVSEKRGSREDRIAQVTDVLRDRMAQSGIRCVDISGRPKHLYSIYQKMQRQHKE 281
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI DI +R+IVE+ E+CY+AL +VH + +PG+ KDYI PK N YQSLHTVV G
Sbjct: 282 FHEIFDIAAIRIIVESNEECYRALAIVHDAFKPIPGRFKDYIGLPKPNRYQSLHTVVVGN 341
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW+YKE S F + W R +L WQ
Sbjct: 342 MGRPLEVQIRTLEMHQIAEYGIAAHWKYKESGHSSSKFTASDEKFTWLRQLLEWQ 396
>gi|300856534|ref|YP_003781518.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
gi|300436649|gb|ADK16416.1| GTP pyrophosphokinase [Clostridium ljungdahlii DSM 13528]
Length = 725
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 223/354 (62%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+Y A+ AH+ Q R SG+PY+ H VE A +L +G +++ + AGLLHD ++D S
Sbjct: 20 IVEKAYYFADEAHKKQKRESGEPYISHPVEVAYILVEMGLDTSTIVAGLLHDVIEDTQFS 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLI 318
Y+ I R F VA+LVEGV+KL ++ +E +AD + M LAMAD R +LI
Sbjct: 80 YEDIKREFSVEVANLVEGVTKLGKIECKTKEEQ------QADNVRKMLLAMADDIRVILI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++N +++
Sbjct: 134 KLADRLHNMRTLKYMPVKKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINQNEY 193
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ K+ E E + I +L+ LK I + GR K YSI+ KM+KK T+
Sbjct: 194 YFIVRKIAEKRVEREKYIDEIISQLKDNLKKSGIDSDI-EGRPKHFYSIYRKMVKKNKTI 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I D+ +R++V +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 253 DQIFDLTAVRILVNTVKDCYAALGIAHTIYKPMPGRFKDYIAMPKPNMYQSLHSTVIGPQ 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG ++ + + + W R +L WQ E
Sbjct: 313 GKPFEIQIRTFEMHKTAEYGIAAHWKYKEG-VDTANDIDKKLTWLREILEWQRE 365
>gi|253682203|ref|ZP_04863000.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
gi|253561915|gb|EES91367.1| GTP pyrophosphokinase [Clostridium botulinum D str. 1873]
Length = 730
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 156/364 (42%), Positives = 228/364 (62%), Gaps = 19/364 (5%)
Query: 196 FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 255
+D +IKA+ AE AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 16 INKDIIIKAYNYAENAHKEQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIED 75
Query: 256 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DAR 314
+Y+ + + F VA+LVEGV+KL ++ +E +++ + M LAM D R
Sbjct: 76 TDYTYEDVEKDFNIEVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIR 129
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LN
Sbjct: 130 VILIKLADRLHNMRTLKYMSVEKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLN 189
Query: 375 PDQHTELSSKLVEC------FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 428
P+++ +L K+ E + E ++ EKLE+A I GR K YSI+ K
Sbjct: 190 PNEYYDLVRKVAEKRKEREEYIERIIHELSEKLEEAGIKSEIE-----GRPKHFYSIYRK 244
Query: 429 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 488
M+ K T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N YQSL
Sbjct: 245 MVIKNKTIDQIFDLTAIRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSL 304
Query: 489 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTW 547
H+ V G P E+QIRT EMH +E+G AAHW+YKEG+ ++S + + W R VL W
Sbjct: 305 HSTVIGPQGKPFEIQIRTYEMHNTSEYGIAAHWKYKEGNLKNSDKDFEAKLAWLREVLEW 364
Query: 548 QCEA 551
Q E
Sbjct: 365 QRET 368
>gi|428305760|ref|YP_007142585.1| (p)ppGpp synthetase I SpoT/RelA [Crinalium epipsammum PCC 9333]
gi|428247295|gb|AFZ13075.1| (p)ppGpp synthetase I, SpoT/RelA [Crinalium epipsammum PCC 9333]
Length = 761
Score = 296 bits (759), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/358 (45%), Positives = 221/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF H GQ RASG+PY+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 52 DLICRAFEFGYNLHDGQRRASGEPYICHPVAVAGLLRDLGGSGAMIAAGFLHDIVEDTDV 111
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + + FG V LVEGV+KLS+L N ++ K +A+ MF+AMA D R ++
Sbjct: 112 TSDDLEKMFGKEVRQLVEGVTKLSKL------NFSSKKERQAENFRRMFIAMAHDIRVIV 165
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ LP KR+R A ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 166 VKLADRLHNMRTLEHLPDEKRRRIALETREIFAPLANRLGIGRFKWELEDLAFKYLEPEA 225
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + E EA +T+ E L+Q L I L L GR K LY I+ KM +++
Sbjct: 226 YRKIQLLVAEKRTDREARLTNVTEILQQGLTASGIECLELSGRPKHLYGIYQKMQRQQKE 285
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI D+ +R++V+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 286 FSEIFDLAAIRILVKTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVSL 345
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLE+QIRT++MH AE+G AAHW+YKE + S V E W R +L WQ E
Sbjct: 346 NGRPLEIQIRTQQMHHIAEYGIAAHWKYKETGNSNRSKVTGTDEKFTWLRQLLDWQNE 403
>gi|333979510|ref|YP_004517455.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822991|gb|AEG15654.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 724
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 222/351 (63%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AE+AHR Q R SG+P++ H V A +LA + + + AGLLHD ++D ++ +
Sbjct: 32 KAYRFAEQAHRDQKRISGEPFITHPVAVAHILANLQMDLQTLVAGLLHDVVEDTGVTLEE 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KLS+L ++E + +A+ L MFLAMA D R +LIKLA
Sbjct: 92 IKTAFGDEVALLVDGVTKLSRLEYRSKEEH------QAENLRKMFLAMAQDIRVILIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ TL K++ A+ETLEI+ PLA+RLGI K +LE+L F++L P+++ EL
Sbjct: 146 DRLHNLRTLKYHTETKQKEIARETLEIYAPLAHRLGIYHLKWELEDLSFRYLEPEKYYEL 205
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ ++ E + +AI+ L + L + I F + GR K LYSI+ KM K++ + EI
Sbjct: 206 AERVSRTRRKREEYIRTAIQILRRKLAEAGI-FADIQGRPKHLYSIYTKMEKQQKDLSEI 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R+IVE+ DCY L VH LW +PG+ KDYI PK N YQSLHT V G P
Sbjct: 265 YDVMAVRVIVESIRDCYAVLGTVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVVGPQGEP 324
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
LE+QIRT+EMH AE+G AAHWRYKEG Q + W R +L WQ E
Sbjct: 325 LEIQIRTREMHRTAEYGIAAHWRYKEGGKTDRDLD-QKLAWLRQILEWQRE 374
>gi|340357216|ref|ZP_08679839.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
gi|339618078|gb|EGQ22679.1| GTP diphosphokinase [Sporosarcina newyorkensis 2681]
Length = 732
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 162/360 (45%), Positives = 228/360 (63%), Gaps = 16/360 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
DF+ KAF A+ AH GQ R+SG+PY+ H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 DFIKKAFVVAKAAHEGQFRSSGEPYINHPIQVAGILAELQMDPETVAAGFLHDVVEDTEV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + I R FG VA LV+GV+KL +L + E +A+ MF+AMA D R +L
Sbjct: 86 SREDIIREFGDEVAMLVDGVTKLDKLKFKSNEEK------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++R ++ETLEIF PLA+RLGIST K +LE++ ++ NP Q
Sbjct: 140 IKLADRLHNMRTLKHVPAAKQRRVSEETLEIFSPLAHRLGISTIKWELEDIALRYSNPQQ 199
Query: 378 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + K VE E + +E++ L + I+ + GR K LYSI+ KM+ +K
Sbjct: 200 YYRIVNLMKQKRVER--EKYLQDVMEQMRVELDNMGIAS-EMHGRPKHLYSIYQKMVIQK 256
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+EI+D+ +R++V++ +DCY AL ++H LW +PG+ KDYI PK N YQSLHT V
Sbjct: 257 KEFNEIYDLLAVRIVVKSIKDCYAALGIIHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVV 316
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 551
G PLEVQIRT+EMH +EFG AAHW YKEG + S+ + + W R +L Q E+
Sbjct: 317 GPAGDPLEVQIRTEEMHRISEFGVAAHWAYKEGKSVAKSSNDIDSKLTWFREILEIQNES 376
>gi|260892286|ref|YP_003238383.1| (p)ppGpp synthetase I SpoT/RelA [Ammonifex degensii KC4]
gi|260864427|gb|ACX51533.1| (p)ppGpp synthetase I, SpoT/RelA [Ammonifex degensii KC4]
Length = 710
Score = 296 bits (758), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 171/376 (45%), Positives = 228/376 (60%), Gaps = 12/376 (3%)
Query: 178 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 237
+E Y +E LA + + E + KAF A+ H GQ R SG+P+L H V A +LA +
Sbjct: 1 MELY-EELLAQVKAYNPGVNEALLRKAFDFAQAKHAGQRRFSGEPFLSHPVAVARILAEL 59
Query: 238 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 297
++ + AGLLHD ++D + + I FGA +A LV+GV+KLS+L ++E
Sbjct: 60 ELDTETIVAGLLHDVVEDTGTTLEEIEHEFGAEIAALVDGVTKLSRLQFRSQEEQ----- 114
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
+A+ L MF+AMA D R VLIKLADRLHN+ TL LP K++ AKETLEIF PLA+RL
Sbjct: 115 -QAENLRKMFVAMAKDVRVVLIKLADRLHNLRTLQYLPPEKQRAIAKETLEIFAPLAHRL 173
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLV 414
GI K +LE+L F++L P+++ EL++K+ + E I L++ L++ I
Sbjct: 174 GIYRLKWELEDLAFRYLEPERYRELAAKVAKTRAAREEYTRELIAILQKRLEEAGIK-AE 232
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
L GR K+LYSI+ KML+ EI+D G+R +VE DCY L VVH LW VPG+ K
Sbjct: 233 LMGRPKNLYSIYQKMLRDGKEYSEIYDRTGIRALVETVRDCYAVLGVVHTLWKPVPGRFK 292
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV 534
DYI PK N YQSLHT V G P+EVQIRT EMH AE+G AAHWRYKEG +
Sbjct: 293 DYIAMPKENMYQSLHTTVIGPQGEPVEVQIRTYEMHRTAEYGIAAHWRYKEGQTRDKQLE 352
Query: 535 LQMVEWARWVLTWQCE 550
+ W R +L W E
Sbjct: 353 AKFA-WLRELLEWVQE 367
>gi|342218775|ref|ZP_08711379.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
gi|341588903|gb|EGS32275.1| GTP diphosphokinase [Megasphaera sp. UPII 135-E]
Length = 737
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/382 (43%), Positives = 235/382 (61%), Gaps = 11/382 (2%)
Query: 171 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 230
++I EG +E + LA + ED + KAF A AH+ Q R SG+ Y++H +
Sbjct: 4 EHIPEGTVEEKFQYLLATIRKYQPDLSEDILTKAFILAADAHKTQRRVSGELYIVHPLAV 63
Query: 231 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 290
A +LA + ++T + A LLHD ++D + + I FG VA LV+GV+KL++L +E
Sbjct: 64 AQILADMKIDATTITASLLHDVVEDTKYTLEEIEERFGKEVAFLVDGVTKLNRLDYRTKE 123
Query: 291 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 349
+ + + L MFLAMA D R V+IKLADRLHNM TL + K++R ++ETLEIF
Sbjct: 124 DQ------QLNSLRKMFLAMAKDIRVVVIKLADRLHNMRTLRYMRSDKQKRISQETLEIF 177
Query: 350 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKD 407
PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V AI L++AL D
Sbjct: 178 APLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVDQMKQKRHAREEIVNDAITVLQKALAD 237
Query: 408 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 467
+ISF + GR K LYSI+ KM K + +++D+Y +R+IV+ +DCY L +VH LW
Sbjct: 238 SHISFEI-NGRPKHLYSIYKKMKKDNRDLSQVYDLYAIRIIVDTVQDCYGVLGIVHSLWK 296
Query: 468 EVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
+P + KDYI PK N YQSLHT V G P+E+QIRT EMH AE+G AAHWRYKEG
Sbjct: 297 PLPYRFKDYIAMPKPNNYQSLHTTVIGSQGQPVEIQIRTWEMHHVAEYGVAAHWRYKEGH 356
Query: 528 CQHSSFVL-QMVEWARWVLTWQ 548
+ + + W R +L WQ
Sbjct: 357 ANAGANEFDEKMGWLRNLLEWQ 378
>gi|302391503|ref|YP_003827323.1| (p)ppGpp synthetase I SpoT/RelA [Acetohalobium arabaticum DSM 5501]
gi|302203580|gb|ADL12258.1| (p)ppGpp synthetase I, SpoT/RelA [Acetohalobium arabaticum DSM
5501]
Length = 734
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 155/353 (43%), Positives = 229/353 (64%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A+ AH GQ R SG+P++ H + A+++A + + + LLHD ++D +
Sbjct: 33 ELITKAYKFAKDAHEGQYRVSGEPFVEHPLGVALIMAELELDIISITGALLHDVVEDTEV 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S+ + FG + LV GV+KLS+++ +RE +A+ L MFLAM+ D R +L
Sbjct: 93 SFAQLRNEFGEEITLLVNGVTKLSKIAFKSREEQ------QAESLRKMFLAMSKDIRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL+ L K++R A+ET+EI+ PLA+RLGIST K +LE+L FKHL P++
Sbjct: 147 IKLSDRLHNMRTLEYLSQQKQERIARETIEIYAPLAHRLGISTLKWELEDLSFKHLEPNK 206
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ELS+K+ + DE + I K+E+ L + I + GR K LYSI+ KM +K
Sbjct: 207 YYELSNKVSKNRDEREEYIDRCISKVEKRLNLEGIDAHIY-GRPKHLYSIYQKMKRKNKE 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ EI+D+ LR+IV + ++CYQ L +H++W +PG++KDYI PK N YQSLHT V G
Sbjct: 266 LSEIYDLVALRVIVNDVQECYQVLGNIHEIWNPIPGRIKDYIAMPKSNMYQSLHTTVIGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT +MH AE+G AAHWRYKEG +++ + + W R +L WQ
Sbjct: 326 KGEPLEIQIRTWDMHRTAEYGVAAHWRYKEG-KKNNEKAAKKISWLRQLLEWQ 377
>gi|296187176|ref|ZP_06855573.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
gi|296048211|gb|EFG87648.1| GTP diphosphokinase [Clostridium carboxidivorans P7]
Length = 724
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 226/354 (63%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +
Sbjct: 20 MVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYT 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ I F VA+LV+GV+KL ++ +E +AD + M LAMA D R +LI
Sbjct: 80 YEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADR+HNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++
Sbjct: 134 KLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEY 193
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ K+ E +E + I++LE L IS + GR K YSI+ KM+ K T+
Sbjct: 194 YFIVRKISEKREEREEYIGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTI 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I D+ +R++VE +DCY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 253 DQIFDLTAVRILVETVKDCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQ 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT MH AE+G AAHW+YKEG + + + + + W R +L WQ E
Sbjct: 313 GKPFEIQIRTFAMHKTAEYGIAAHWKYKEG-VETADDIDKKLTWLREILEWQRE 365
>gi|313891996|ref|ZP_07825597.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
gi|313119639|gb|EFR42830.1| GTP diphosphokinase [Dialister microaerophilus UPII 345-E]
Length = 783
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 229/382 (59%), Gaps = 19/382 (4%)
Query: 179 ETYAKEFLANA------QLKHKIFRED---FVIKAFYEAERAHRGQMRASGDPYLLHCVE 229
ETY ++ + +A ++K I +D F+ KAF A +AH GQ RA+G+PY+ H +
Sbjct: 51 ETYYEKAIEDAYEKLINRVKKYILNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLS 110
Query: 230 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 289
A +L+ + + + A LLHD +D + + I FG +A LV+GV+KLSQ +
Sbjct: 111 VAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNK 170
Query: 290 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
E+ + + MFLAMA D R V+IKLADRLHNM TL KRQR AKET+EI
Sbjct: 171 EDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEI 224
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALK 406
+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+V + L++ +
Sbjct: 225 YAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKID 284
Query: 407 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 466
+ NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+ CY L +VH LW
Sbjct: 285 ETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQCYAVLGIVHSLW 343
Query: 467 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
+P + KDYI PK N YQSLHT + G P+E+QIRT EMH +E+G AAHWRYKEG
Sbjct: 344 KPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQPVEIQIRTWEMHHVSEYGIAAHWRYKEG 403
Query: 527 DCQHSSFVLQMVEWARWVLTWQ 548
+ +S + W R +L WQ
Sbjct: 404 NSNNSQKFDSKIGWLRRILEWQ 425
>gi|126695549|ref|YP_001090435.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
gi|126542592|gb|ABO16834.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9301]
Length = 769
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 225/363 (61%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 377 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT MH AE+G AAHW+YKEG S + W R ++ WQ E +
Sbjct: 354 RHR-PIEVQIRTTSMHQIAEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNER 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|373468555|ref|ZP_09559802.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371766018|gb|EHO54298.1| putative GTP diphosphokinase [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 762
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 228/355 (64%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIT 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
YD + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YDELADMFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K Q L + F + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDDIIKKFSQHLSATGMKF-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE G + +M W R +L WQ
Sbjct: 342 GQPFEVQIRTVEMHKTAEFGIAAHWKYKESGSGSVAKGAEDAKM-NWLRQILEWQ 395
>gi|255526671|ref|ZP_05393576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
gi|255509651|gb|EET85986.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium carboxidivorans P7]
Length = 724
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 226/354 (63%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A+ AH+ Q R SG+PY++H VE A +LA +G +++ + AGLLHD ++D +
Sbjct: 20 MVEKAYNLADEAHKQQKRESGEPYIMHPVEVACILAEMGMDTSTITAGLLHDVIEDTEYT 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ I F VA+LV+GV+KL ++ +E +AD + M LAMA D R +LI
Sbjct: 80 YEDICSEFSVEVANLVDGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVILI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADR+HNM TL +P+ K++ AKET +I+ PLA+RLG+S K +LE+L F+++NP+++
Sbjct: 134 KLADRMHNMRTLKYMPVEKQKEKAKETFDIYAPLAHRLGMSKIKWELEDLAFRYINPNEY 193
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ K+ E +E + I++LE L IS + GR K YSI+ KM+ K T+
Sbjct: 194 YFIVRKISEKREEREEYIGEVIQQLENNLDRAGISSEI-DGRPKHFYSIYRKMVNKNKTI 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I D+ +R++VE +DCY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 253 DQIFDLTAVRILVETVKDCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHSTVIGPQ 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT MH AE+G AAHW+YKEG + + + + + W R +L WQ E
Sbjct: 313 GKPFEIQIRTFAMHKTAEYGIAAHWKYKEG-VETADDIDKKLTWLREILEWQRE 365
>gi|291297171|ref|YP_003508569.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus ruber DSM 1279]
gi|290472130|gb|ADD29549.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus ruber DSM 1279]
Length = 750
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 164/373 (43%), Positives = 232/373 (62%), Gaps = 24/373 (6%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A A RAH GQ R SG+PY++H V A +LA +G + + AGLLHDT++D +
Sbjct: 42 VREALEFAYRAHEGQQRKSGEPYIVHPVAVAQILAELGLDVETLLAGLLHDTIEDTEVRP 101
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLAR--ENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I FGA V +VEG +K+S+L KLA + + ++ A+ L MF+AMA D R ++
Sbjct: 102 EDIEERFGAAVRKIVEGETKVSKLYKLAHAAQEDKHAEGKHAEDLRQMFIAMAEDVRIII 161
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHN+ TL+ +P K+QR A+ETLEI+ PLA+RLGI K++LE+L F++L+P+
Sbjct: 162 VKLADRLHNLRTLEFMPPHKQQRIARETLEIYAPLAHRLGIGQVKLELEDLSFRYLDPEN 221
Query: 378 HTELSSKLV--ECFDEAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKML 430
+ L +L EA V +A EKLEQAL ++I + GR K L+SI KM
Sbjct: 222 YQALERRLKSHRAEREAAVQAAKEKLEQALARDFILKQSIKKFEVTGRTKHLFSIWKKME 281
Query: 431 KKKLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYI 477
++ T+++I+D+ LR+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 282 REGKTIEQIYDLLALRVILDPRQGPDPEENSLREKQVCYHVLGLVHALWQPIPGRVKDYI 341
Query: 478 TRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM 537
PK NGYQSLHT V +PLEVQIRT+EMH AEFG AAHW YKEG + +
Sbjct: 342 AVPKPNGYQSLHTTVIAVNGLPLEVQIRTREMHRVAEFGVAAHWLYKEG-VTDPEDLRRR 400
Query: 538 VEWARWVLTWQCE 550
V W + + WQ E
Sbjct: 401 VGWLKSIQDWQQE 413
>gi|443322004|ref|ZP_21051040.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
gi|442788304|gb|ELR98001.1| (p)ppGpp synthetase, RelA/SpoT family [Gloeocapsa sp. PCC 73106]
Length = 754
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 171/375 (45%), Positives = 227/375 (60%), Gaps = 20/375 (5%)
Query: 185 FLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
LAN H+ ED + +A+ A H+ Q R SG+PY++H V A LL +G +S
Sbjct: 24 LLANGDPNHQYHTEDNRLICQAYEFAYELHKQQTRKSGEPYIVHPVAVAGLLRDLGGDSA 83
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEAD 301
++AAG LHD ++D +S + I FG V LVEGV+KLS+ +SKT +A+
Sbjct: 84 MIAAGFLHDVVEDTEVSLEEIESRFGEQVRQLVEGVTKLSKFE-------FSSKTERQAE 136
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MFLAMA D R +++KLADRLHNM TL L L K+Q A ET EIF PLANRLGI
Sbjct: 137 NFRRMFLAMAKDIRVIVVKLADRLHNMRTLQHLSLEKQQAIALETKEIFAPLANRLGIGR 196
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDK----NISFLVLC 416
K +LE+L FK+L P+ + + + + E + + IEK+ Q LKD+ I + +
Sbjct: 197 LKWELEDLSFKYLEPEAYRTMQNHIAEKRTDR--EARIEKVTQLLKDRLQTIGIKIIEIQ 254
Query: 417 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 476
GR K LY I+ KM ++ +EI+DI GLRLIV+N+E+CY+AL +VH + +PG+ KDY
Sbjct: 255 GRPKHLYGIYQKMCLQQKQFNEIYDIAGLRLIVDNKEECYRALAIVHDTFRPIPGRFKDY 314
Query: 477 ITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ 536
I PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKE + V
Sbjct: 315 IGLPKSNRYQSLHTSVVGLNGRPLEVQIRTLEMHQVAEYGIAAHWKYKESGGSNQVQVSS 374
Query: 537 MVE---WARWVLTWQ 548
E W R +L WQ
Sbjct: 375 GDEKFTWLRQLLEWQ 389
>gi|320161070|ref|YP_004174294.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
gi|319994923|dbj|BAJ63694.1| GTP pyrophosphokinase [Anaerolinea thermophila UNI-1]
Length = 733
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 223/373 (59%), Gaps = 21/373 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ AE+AH GQ R SG+PY+ HC A +LA I T+V AGLLHDT++D +
Sbjct: 20 EMICKAYQLAEKAHEGQKRLSGEPYITHCEAVAAILADIRVPPTLVIAGLLHDTVEDTPI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS-----------------KTVEAD 301
+ + I R FG +A LV+GV+KL+ L +++R++ AS K + +
Sbjct: 80 TLEDIRREFGDEIAKLVDGVTKLTHLPRVSRDDQYASEVEEYGLALETTEDTRRKQLAQE 139
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
L FLAM D R VLIKLADRLHNM TL +P KR+R A+ETL+IF PLANRLGI
Sbjct: 140 TLRKTFLAMGEDIRVVLIKLADRLHNMRTLGYMPENKRRRIAQETLDIFAPLANRLGIWQ 199
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+L F+++NP+++ E++ L + E + I +L L+ I + GR
Sbjct: 200 IKWELEDLAFRYVNPEKYKEIAELLAQKRADREKQIQEIISRLRTILEQAGIQAEI-TGR 258
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM++K + D + D+ G+RLIV +DCY AL ++H W +P + DYI
Sbjct: 259 PKHIYSIYKKMVEKSRSFDSLMDLRGVRLIVPTTQDCYAALGIIHTHWRPIPHEFDDYIA 318
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK N YQSLHT V + PLEVQIRT EM AE+G AAHWRYKE + Q V
Sbjct: 319 APKDNNYQSLHTAVIYDDGKPLEVQIRTPEMDQNAEYGIAAHWRYKEKHGKLEEDYEQRV 378
Query: 539 EWARWVLTWQCEA 551
R ++ W+ E
Sbjct: 379 NLLRRLMDWRQEV 391
>gi|121535597|ref|ZP_01667404.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
gi|121305837|gb|EAX46772.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosinus carboxydivorans Nor1]
Length = 735
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 220/355 (61%), Gaps = 10/355 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A AHRGQ R SG+ Y+ H + A +LA + ++ ++AGLLHD ++D +
Sbjct: 26 ELVQKAYAFAGEAHRGQYRVSGEEYITHPLGVAKILADLQIDALTISAGLLHDVVEDTPV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG +A LV+GV+KLS++ ++E + + MFLAMA D R VL
Sbjct: 86 TLEEIEKQFGKEIAMLVDGVTKLSRMEYKSKEEQ------QLESYRKMFLAMAKDIRVVL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ A+ETLEIF PLANRLGI + K +LE+L F+ L P++
Sbjct: 140 IKLADRLHNMRTLKYMPPAKQKEIARETLEIFAPLANRLGIFSIKWELEDLAFRFLEPEK 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL K+ + E A++ AI+ L + L I + GR K YSI+ KM K
Sbjct: 200 YYELVEKVKQKRQEREALINEAIKILSERLTAMGIKAEI-QGRPKHFYSIYKKMQKDNKD 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ EI+D+ +R+IV+ +DCY AL +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 LSEIYDLSAVRVIVDTIKDCYAALGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGL 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT EMH +E+G AAHWRYKEG Q + W R +L W E
Sbjct: 319 QGQPLEIQIRTVEMHRTSEYGIAAHWRYKEGGKGTDRDFEQKLSWLRQLLEWHQE 373
>gi|338814984|ref|ZP_08626943.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
gi|337273028|gb|EGO61706.1| (p)ppGpp synthetase I, SpoT/RelA [Acetonema longum DSM 6540]
Length = 736
Score = 295 bits (756), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 222/353 (62%), Gaps = 10/353 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A AH+GQ+R SG+ Y++H V A +LA + ++T ++A +LHD ++D F+
Sbjct: 28 DLLRKAYAVACEAHKGQLRVSGEEYIIHPVGVAKILADLQIDATTISAAILHDVVEDTFI 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG VA LV+GV+KLS++ ++E + + M LAMA D R VL
Sbjct: 88 TLEDIEKKFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENYRKMLLAMAKDLRVVL 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++R A+ETLEI+ PLA+RLG+S K ++E+L F++L P++
Sbjct: 142 IKLADRLHNMRTLKFMPEVKQKRIARETLEIYAPLAHRLGMSNIKWEMEDLSFRYLEPER 201
Query: 378 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL K+ + E ++ AI L L D I + GR K YSI+ KM K
Sbjct: 202 YYELVEKVKQKRQERQDIIDEAIRILSDRLADMGIKAEI-QGRPKHFYSIYKKMQKDHKD 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++VE +DCY AL +VH LW +P + KDYI PK N YQSLHT V G
Sbjct: 261 INEIYDLSAVRVLVETVKDCYGALGIVHTLWKPIPLRFKDYIAMPKSNMYQSLHTTVIGT 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH +E+G AAHWRYKEG Q + W R +L WQ
Sbjct: 321 RGQPLEIQIRTWEMHRTSEYGIAAHWRYKEGTKNSGKDFDQKLSWLRQLLEWQ 373
>gi|291545648|emb|CBL18756.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus sp. SR1/5]
Length = 774
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/388 (41%), Positives = 241/388 (62%), Gaps = 22/388 (5%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E + + + H + KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 41 EVLYQELIKSVKKYHPSTDISMIEKAYKVASEAHKDQKRKSGEPYIIHPLCVAIILADLE 100
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AGLLHD ++D +++Y+ + + FG+ VA LV+GV+KL QLS + V
Sbjct: 101 LDKETIVAGLLHDAVEDTWMTYEEVEKEFGSEVALLVDGVTKLGQLS-----YSKDKVEV 155
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K+Q A+ET++I+ P+A RLG
Sbjct: 156 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLG 215
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVL 415
IS KV+L++L K+L PD + +L K L + E V S +++++Q ++D NI V
Sbjct: 216 ISKIKVELDDLSLKYLKPDVYYDLVEKVALRKSAREEFVNSIVKQVKQHMEDANIRAQV- 274
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+D+I+D++ +R+IV+ +DCY AL V+H+++ +PG+ KD
Sbjct: 275 DGRVKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVKDCYAALGVIHEMYKPIPGRFKD 334
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-------GDC 528
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G
Sbjct: 335 YIAMPKANMYQSLHTTLIGPNGQPFEIQIRTFEMHKTAEYGIAAHWKYKETSDGKKPGKS 394
Query: 529 QHSSFVLQMVEWARWVLTWQCEAMSKDR 556
+ + + W R +L WQ + MS +R
Sbjct: 395 EE-----EKLNWLRQILEWQRD-MSDNR 416
>gi|158320743|ref|YP_001513250.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus oremlandii OhILAs]
gi|158140942|gb|ABW19254.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus oremlandii OhILAs]
Length = 724
Score = 295 bits (756), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 220/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF AE+AH+GQ R SG+ Y +H VE A +L + +++ + AGLLHD ++D
Sbjct: 20 ELITKAFNYAEKAHQGQYRKSGEDYFIHPVEVARILIDLQMDASTIVAGLLHDVIEDTEY 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
YD + FG +ADLVEGV+K+++LS ++E +A+ L M LAMA D R +L
Sbjct: 80 GYDMVKEEFGVEIADLVEGVTKITRLSFNSKEER------QAENLRKMVLAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL K++ A ETLEIF P+ANRLGIS K +LE++C ++++P
Sbjct: 134 IKLADRLHNMRTLKFQNPEKQKEKATETLEIFAPIANRLGISRIKWELEDICLRYIDPQG 193
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E ++ IE L + L+D +I + GR K YSI+ KM + +
Sbjct: 194 YYDLVEKVSQKRKDRENFISDIIETLREKLEDFDIENEI-TGRPKHFYSIYRKMTYQGKS 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI D +R+IV + +DCY L VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FDEIFDFMAVRVIVNSVKDCYGVLGVVHTIWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG + M + W R +L W+ E
Sbjct: 313 QGDPFEIQIRTFEMHQIAEYGIAAHWKYKEGRTETVEQQNDMKLAWLRQMLEWEKE 368
>gi|218296101|ref|ZP_03496870.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
gi|218243478|gb|EED10007.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus aquaticus Y51MC23]
Length = 726
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 165/372 (44%), Positives = 235/372 (63%), Gaps = 27/372 (7%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++
Sbjct: 26 VHKAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDADTVAAGLLHDTMEDCGVAG 85
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V +VEG +K+S+L K A N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPAVRRIVEGETKVSKLYKFA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPEGKQKRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQ 202
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKMLKK 432
L ++L E + E MV A+E LE+ALK + + GR K LYSI KM ++
Sbjct: 203 ALLARLQETQEARERMVKRAMEVLEEALKQDALLQSQLQGFEVTGRPKHLYSIWKKMERE 262
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPSPTEEAKGLREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V
Sbjct: 323 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRIAEYGIAAHWLYKEG-LTDPEEVKRRV 380
Query: 539 EWARWVLTWQCE 550
W + + WQ E
Sbjct: 381 SWLKNIQEWQQE 392
>gi|123967746|ref|YP_001008604.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. AS9601]
gi|123197856|gb|ABM69497.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. AS9601]
Length = 769
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 225/363 (61%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDFRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 377 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKVTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT MH AE+G AAHW+YKEG S + W R ++ WQ E +
Sbjct: 354 RHR-PIEVQIRTTSMHQIAEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNER 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|333897247|ref|YP_004471121.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112512|gb|AEF17449.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 718
Score = 295 bits (755), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 224/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ ++KA+ A +AH GQ R SG+PY++H VE AM+LA + + + +A+GLLHD ++D +
Sbjct: 20 NLILKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 SYEDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + E + IEKL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L VVH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT +MH AE+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWDMHRTAEYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|114566344|ref|YP_753498.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337279|gb|ABI68127.1| GTP diphosphokinase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 734
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 225/355 (63%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KAF AE+AH+ Q R SG+PY++H E A++LA I ++ + A LLHD ++D +S
Sbjct: 21 LIEKAFRVAEQAHQEQKRISGEPYIIHPCEVALILADIEMDTPTICAALLHDVIEDTPVS 80
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y I + FG +A LV+GV+KL+++ +RE+ +A+ L MF+AMA D R ++I
Sbjct: 81 YLDILKEFGEEIALLVDGVTKLTRIDFKSRED------AQAENLRRMFIAMARDIRVIII 134
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL K++ A+ET+EIF PLA+RLGI +K +LE+L F ++ P+ +
Sbjct: 135 KLADRLHNMRTLSYHAEAKQKVIARETMEIFAPLAHRLGIFRFKWELEDLAFYYMEPEMY 194
Query: 379 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E++ +L + E V +E+++ L +I + GR K+++SI+ KM+K+ +
Sbjct: 195 YEVAKRLKQKRRERENYVNDLVEQIKVGLHQIDIDADI-KGRPKNIFSIYKKMIKQGKDV 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D +R++VE+ DCY L ++H +W +PG+ KDYI PK N YQSLHT + G G
Sbjct: 254 DEIYDKIAIRVLVEDVRDCYGVLGIIHTMWKPLPGRFKDYIATPKANMYQSLHTTLIGRG 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P EVQIRT EMH AE+G AAHWRYKEG + + W R +L WQ E
Sbjct: 314 GEPFEVQIRTAEMHRTAEYGIAAHWRYKEGYNPRERKFDEKLSWLRQILEWQQEV 368
>gi|390934796|ref|YP_006392301.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570297|gb|AFK86702.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 718
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 225/355 (63%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ ++KA+ A +AH+GQ R SG+PY++H VE AM+LA + + + +A+GLLHD ++D +
Sbjct: 20 NLILKAYDYAVKAHKGQYRNSGEPYIVHPVEVAMILADLELDVSTIASGLLHDVIEDTSI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYEDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD+
Sbjct: 134 IKLADRLHNMRTLKFLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDE 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + E + IEKL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIEKLKEKLNEIGIKADV-DGRPKHFYSIYKKMKQQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L VVH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT +MH AE+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWDMHRTAEYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|118444430|ref|YP_877917.1| GTP pyrophosphokinase [Clostridium novyi NT]
gi|118134886|gb|ABK61930.1| GTP pyrophosphokinase [Clostridium novyi NT]
Length = 729
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 224/357 (62%), Gaps = 10/357 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D +IKA+ A+ AH+ Q R SG+PY++H VE A +LA +G + +AA LLHD ++D
Sbjct: 18 KDIIIKAYNYAKDAHKAQKRISGEPYIIHPVEVACILAEMGLDENTIAASLLHDVIEDTD 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+Y+ + + F VA+LVEGV+KL ++ +E +++ + M LAM D R +
Sbjct: 78 YTYEDVEKEFNREVANLVEGVTKLGKIKFKTKEEQ------QSENVRKMLLAMTKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL + + K++ AKETL+I+ PLA+RLGIS K +LE+L ++LNP+
Sbjct: 132 LIKLADRLHNMRTLKYMTVEKQKEKAKETLDIYAPLAHRLGISKVKWELEDLALRYLNPN 191
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L K+ E E + I +L++ L + I + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVRKVAEKRKEREEYIERIIHELKEKLDEAGIKSEI-EGRPKHFYSIYRKMVVKNK 250
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I D+ +R++VE+ +DCY L +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 251 TIDQIFDLTAVRILVEDVKDCYAVLGMVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIG 310
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRT EMH +E+G AAHW+YKEG S + W R VL WQ E
Sbjct: 311 PQGKPFEIQIRTYEMHYTSEYGIAAHWKYKEGGKNSDSDFEAKLAWLREVLEWQRET 367
>gi|218246275|ref|YP_002371646.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8801]
gi|257059322|ref|YP_003137210.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 8802]
gi|218166753|gb|ACK65490.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8801]
gi|256589488|gb|ACV00375.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 8802]
Length = 743
Score = 295 bits (754), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 222/356 (62%), Gaps = 14/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 38 LICRAFNFAYQLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDKAMIAAGFLHDVVEDTDVT 97
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVL 317
+ I FG+ V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 98 VEQIEENFGSEVRQLVEGVTKLSKF-------NFSSKTEHQAENFRRMFLAMAKDIRVIV 150
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 151 VKLADRLHNMRTLEHLKPEKQERIARETKEIFAPLANRLGIWRFKWELEDLSFKYLEPEA 210
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ S + E E + + E L Q L+ + + L GR K LY I+ KM +++
Sbjct: 211 YREIQSLVAEKRSDRETRLETIKEMLRQRLQKIGVQVVELQGRPKHLYGIYHKMQRQQKG 270
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+DI LR+IV+N EDCY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 271 FNQIYDIAALRIIVKNNEDCYRALAVVHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGL 330
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW+YKE G H+ + W R +L WQ
Sbjct: 331 TGRPLEVQIRTLEMHHIAEYGIAAHWKYKETGGSDHTELSEEDEKFTWLRQLLEWQ 386
>gi|329121021|ref|ZP_08249652.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
gi|327471183|gb|EGF16637.1| GTP diphosphokinase [Dialister micraerophilus DSM 19965]
Length = 783
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 229/382 (59%), Gaps = 19/382 (4%)
Query: 179 ETYAKEFLANA------QLKHKIFRED---FVIKAFYEAERAHRGQMRASGDPYLLHCVE 229
ETY ++ + +A ++K I +D F+ KAF A +AH GQ RA+G+PY+ H +
Sbjct: 51 ETYYEKAIEDAYKKLINRVKKYISNQDDINFIKKAFELANKAHSGQKRATGEPYIFHPLS 110
Query: 230 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 289
A +L+ + + + A LLHD +D + + I FG +A LV+GV+KLSQ +
Sbjct: 111 VAYILSELELDRNAIVAALLHDVAEDTDTTLEDIENQFGKEIAFLVDGVTKLSQFKYKNK 170
Query: 290 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
E+ + + MFLAMA D R V+IKLADRLHNM TL KRQR AKET+EI
Sbjct: 171 EDQ------QLENFQKMFLAMAEDVRVVIIKLADRLHNMRTLWVFRKEKRQRVAKETIEI 224
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALK 406
+ PLA+RLGI K +LE+LCF +L P+ + +L S++ E EA+V + L++ +
Sbjct: 225 YAPLAHRLGIYNIKWELEDLCFHYLYPEDYYDLVSQMREKRQVREAIVEDTMHVLKEKID 284
Query: 407 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 466
+ NI V+ GR K YSI+ KM + + +I+D+Y +R+IV+ CY L +VH LW
Sbjct: 285 ETNIK-AVITGRPKHFYSIYKKMKRDNRELSQIYDLYAVRVIVDTIPQCYAVLGIVHSLW 343
Query: 467 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
+P + KDYI PK N YQSLHT + G P+E+QIRT EMH +E+G AAHWRYKEG
Sbjct: 344 KPLPKRFKDYIAVPKPNMYQSLHTTIIGTKGQPVEIQIRTWEMHHVSEYGIAAHWRYKEG 403
Query: 527 DCQHSSFVLQMVEWARWVLTWQ 548
+ +S + W R +L WQ
Sbjct: 404 NSNNSQKFDSKIGWLRRILEWQ 425
>gi|399887294|ref|ZP_10773171.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
arbusti SL206]
Length = 736
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 161/368 (43%), Positives = 227/368 (61%), Gaps = 23/368 (6%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+DF+ KA+ A AH+ Q R SG+PY++H E A +LA +G + +AAGLLHD ++D
Sbjct: 18 KDFINKAYNFAVDAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTE 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
SY+ + R F + VADLVEGV+KL ++S +E +AD + M LAMA D R +
Sbjct: 78 YSYEDVTREFNSEVADLVEGVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKL+DRLHNM TL + + K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+
Sbjct: 132 LIKLSDRLHNMRTLRYMSVKKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYMKPN 191
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
++ EL S K VE E + + L + L++ NI + GR K YSI+ KM+ K
Sbjct: 192 EYYELVDDISEKRVE--REEYIKDIVVDLHKNLEEANI-LADIDGRPKHFYSIYRKMVNK 248
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T+D+I D+ +R++V + +CY L +VH ++ +PG+ KDYI PK N YQSLH+ V
Sbjct: 249 NKTLDQIFDLTAIRILVNDIRECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTV 308
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-----DCQHSSFVL----QMVEWARW 543
G E+QIRT EMH AE+G AAHW+YKEG D + S V + W R
Sbjct: 309 IGPQGKSFEIQIRTYEMHKTAEYGIAAHWKYKEGITEEADSKDSEPVKADFNTKLTWVRE 368
Query: 544 VLTWQCEA 551
+L WQ E
Sbjct: 369 MLDWQKET 376
>gi|452946137|gb|EME51637.1| GTP pyrophosphokinase [Amycolatopsis decaplanina DSM 44594]
Length = 776
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 223/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLES 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V +LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGEKVGELVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + S I +L L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G P
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 366
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 367 LEVQIRTYEMHRTAEYGIAAHWRYKETKGTHNGNAMDVDEMAWMRQLLDWQREA 420
>gi|126660186|ref|ZP_01731304.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
gi|126618551|gb|EAZ89302.1| (p)ppGpp 3'-pyrophosphohydrolase [Cyanothece sp. CCY0110]
Length = 744
Score = 294 bits (753), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/370 (44%), Positives = 228/370 (61%), Gaps = 15/370 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYKLHEGQARKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDV 96
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEEIEEMFGHEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 150 VVKLADRLHNMRTLEPLRPEKQRRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPE 209
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ + + E E + + L++ L D IS L L GR K LY I+ KM ++
Sbjct: 210 DYREIQNLISEKRIDRETRIETVKNTLQKRLDDMGISILELQGRPKHLYGIYFKMQRQNK 269
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRALAVVHDVFKPMPGRFKDYIGLPKPNRYQSLHTTVVG 329
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHW+YKE G H+ F + W R +L WQ +
Sbjct: 330 LNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGGSNHTHFSNEDEKFTWLRQLLDWQND- 388
Query: 552 MSKDRSCVGN 561
+ D+ V N
Sbjct: 389 LKDDQEYVDN 398
>gi|451336886|ref|ZP_21907438.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
gi|449420535|gb|EMD26011.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Amycolatopsis azurea
DSM 43854]
Length = 776
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 223/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLES 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V +LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGEKVGELVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + S I +L L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRSVITELTGNLEGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G P
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 366
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 367 LEVQIRTYEMHRTAEYGIAAHWRYKETKGTHNGNAMDVDEMAWMRQLLDWQREA 420
>gi|196250100|ref|ZP_03148794.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
gi|196210284|gb|EDY05049.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. G11MC16]
Length = 732
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 223/355 (62%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ A++AHR Q R SG+PY++H ++ A +LA + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKQAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEAT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGADVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 320 GEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTVKPNSFEEKLSWFREILDWQNDA 374
>gi|339629624|ref|YP_004721267.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|379007260|ref|YP_005256711.1| (p)ppGpp synthetase I SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
gi|339287413|gb|AEJ41524.1| GTP pyrophosphokinase [Sulfobacillus acidophilus TPY]
gi|361053522|gb|AEW05039.1| (p)ppGpp synthetase I, SpoT/RelA [Sulfobacillus acidophilus DSM
10332]
Length = 719
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 220/354 (62%), Gaps = 12/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I+A A+ AHRGQ RASG+PY+ H + A +LA + ++ + A LLHD ++D
Sbjct: 20 DQIIRAIEFADEAHRGQSRASGEPYIAHPLAVAGILADLKMDTPTIVAALLHDVVEDTAY 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I FG VA LV+GV+KL +L +E +A+ L MFLAMA D R +L
Sbjct: 80 TLADIESRFGTEVAQLVDGVTKLDRLEVRTQEEE------QAENLRKMFLAMAKDIRVIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP + R AKET+EI+ PLA+RLGI K +LE+L F++L P
Sbjct: 134 IKLADRLHNMRTLKHLPQDRVTRIAKETMEIYAPLAHRLGIFRIKWELEDLAFQYLQPAA 193
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDK-NISFLV--LCGRHKSLYSIHCKMLKKKL 434
+ E+ + + E +A++ + Q LKD+ + S +V + GR K LYSI+ KM K+
Sbjct: 194 YQEMKELVAKKRQER--EAAVDAVIQELKDRLDASGMVSEVSGRAKHLYSIYQKMHKQGK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+I+D+ +R++VE+ +DCY L +VH LW VPG+ KDYI PK N YQSLHT V G
Sbjct: 252 DFGQIYDLVAVRVLVESVKDCYAVLGLVHSLWKPVPGRFKDYIAMPKSNLYQSLHTTVIG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHWRYKEG + Q + W R +L WQ
Sbjct: 312 PHGEPLEVQIRTFEMHHTAEYGIAAHWRYKEGSSKADRDFEQKLSWLRQLLEWQ 365
>gi|87123541|ref|ZP_01079392.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
gi|86169261|gb|EAQ70517.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9917]
Length = 777
Score = 294 bits (752), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 163/347 (46%), Positives = 210/347 (60%), Gaps = 10/347 (2%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H+GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ + FGA V
Sbjct: 80 HQGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTPAQLESHFGAEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L PD E+ ++
Sbjct: 194 GALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPDAFREIQQEVATKRS 253
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 254 EREERLGVTVKLLSDRLAAVGLDSCEVSGRPKHLYGIWSKMQRQQKAFHEIYDVAALRIL 313
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT E
Sbjct: 314 TPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLE 372
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH AEFG AAHW+YKEG + + W R ++ WQ E + D
Sbjct: 373 MHQVAEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGADD 419
>gi|255280796|ref|ZP_05345351.1| GTP diphosphokinase [Bryantella formatexigens DSM 14469]
gi|255268733|gb|EET61938.1| RelA/SpoT family protein [Marvinbryantia formatexigens DSM 14469]
Length = 774
Score = 293 bits (751), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/373 (42%), Positives = 234/373 (62%), Gaps = 14/373 (3%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
+E +A+ + H + KA+ A AH+GQ R SG+PY++H + A++LA + +
Sbjct: 39 QELIASIKRYHPSADTSMIEKAYKIASEAHKGQKRKSGEPYIIHPLCVAIILADLEMDKE 98
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEAD 301
+ AGLLHD ++D ++ + I + FG V LV+GV+KL QLS +A K V+A+
Sbjct: 99 TITAGLLHDVVEDTVMTSEEIRQEFGEDVEQLVDGVTKLGQLS------YSADKIEVQAE 152
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLGIS
Sbjct: 153 NLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMSPEKQKEKARETMDIYAPIAQRLGISK 212
Query: 361 WKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
KV+L++L K+L PD + +L K L + E V ++++++ ++D I V GR
Sbjct: 213 IKVELDDLSLKYLQPDVYYDLVEKVALRKTEREKFVQGIVDEVKKHIEDAGIRAQV-DGR 271
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +SI+ KM+ + T+D+I+D++ +R+IV+ +DCY AL V+H+++ +PG+ KDYI
Sbjct: 272 VKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVKDCYAALGVIHEMYTPIPGRFKDYIA 331
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVL 535
PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G SS
Sbjct: 332 MPKPNMYQSLHTTLIGPNGTPFEIQIRTFEMHKTAEYGIAAHWKYKEQSDGKKPDSSREE 391
Query: 536 QMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 392 EKMTWLRQILEWQ 404
>gi|218441725|ref|YP_002380054.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7424]
gi|218174453|gb|ACK73186.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7424]
Length = 749
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 219/355 (61%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A HRGQ R SG+PY+ H V A LL +G +ST++AAG LHD ++D ++
Sbjct: 42 LICRAFNFAYELHRGQYRKSGEPYIAHPVAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 102 LEEIEERFGLEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 154
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K+ R A ET EIF PLANRLGI +K +LE+LCFK+L P+
Sbjct: 155 VKLADRLHNMRTLEHLAPEKQCRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEA 214
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + + E E + E L + L + L + GR K LY I+ KM ++
Sbjct: 215 YREIQTLVAEKRVDRETRIDKISETLRERLYQIGVKVLEIQGRPKHLYGIYDKMQRQHKE 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LR++VE +E+CY+AL +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 FHEIYDIAALRILVETKEECYRALAIVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVVGL 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW+YKE G + + + W R ++ WQ
Sbjct: 335 NCRPLEVQIRTLEMHHIAEYGIAAHWKYKETGGSTYNITSEDEKFTWLRQLIEWQ 389
>gi|253578285|ref|ZP_04855557.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850603|gb|EES78561.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 776
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 228/353 (64%), Gaps = 14/353 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D +++Y+
Sbjct: 66 KAYKVASEAHEGQKRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMTYEE 125
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKL 320
+ + FG+ VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R +LIKL
Sbjct: 126 VEKEFGSEVALLVDGVTKLGQLS------YSADKVEVQAENLRKMFLAMAKDIRVILIKL 179
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM TL + K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD + +
Sbjct: 180 ADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDVYYD 239
Query: 381 LSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L K L + E V + ++++++ + D NI V GR K +SI+ KM+ + T+D+
Sbjct: 240 LVHKVALRKSEREQFVGAIVKEVKKHMDDANIKAQV-DGRVKHFFSIYKKMVNQDKTIDQ 298
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 299 IYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPNGQ 358
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE G + + W R +L WQ
Sbjct: 359 PFEIQIRTYEMHRTAEYGIAAHWKYKESSDGKAPVGKSEEEKLNWLRQILEWQ 411
>gi|359412257|ref|ZP_09204722.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
gi|357171141|gb|EHI99315.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium sp. DL-VIII]
Length = 736
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/365 (42%), Positives = 227/365 (62%), Gaps = 22/365 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V +A+ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 DMVKRAYNFAEKAHKEQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SYD F A +ADLV+GV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVNLFNAEIADLVDGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ EL + E + + +V+ EKLE A +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVSDLEEKLEAAGIQSDID-----GRPKHFYSIYKKMVS 250
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 251 KNKSIEQIFDLTAIRVLVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTT 310
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVL 545
V G E+QIRT EMH AE+G AAHW+YKEGD + F ++V W R +L
Sbjct: 311 VIGPQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDTAKGEQDKQKDFEKKLV-WLRDML 369
Query: 546 TWQCE 550
WQ E
Sbjct: 370 EWQKE 374
>gi|138896146|ref|YP_001126599.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
gi|134267659|gb|ABO67854.1| ppGpp synthetase/hydrolase Rel [Geobacillus thermodenitrificans
NG80-2]
Length = 732
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 222/355 (62%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ A+ AHR Q R SG+PY++H ++ A +LA + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILADLKMDATTIAAGFLHDVVEDTEAT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGADVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 320 GEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTVKPNSFEEKLSWFREILEWQNDA 374
>gi|419718385|ref|ZP_14245704.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
gi|383305419|gb|EIC96785.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum F0468]
Length = 762
Score = 293 bits (751), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 227/354 (64%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH Q R SG+PYL+H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYLIHPICVAIILAELELDKETIAAGLLHDVIEDTVIT 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YNELADMFGIDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K Q L + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE + + + W R +L WQ
Sbjct: 342 GQPFEVQIRTYEMHKTAEFGIAAHWKYKESGSGSEAKGAEDAKMNWLRQILEWQ 395
>gi|300787167|ref|YP_003767458.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|384150512|ref|YP_005533328.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|399539049|ref|YP_006551712.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|299796681|gb|ADJ47056.1| GTP pyrophosphokinase [Amycolatopsis mediterranei U32]
gi|340528666|gb|AEK43871.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
gi|398319819|gb|AFO78766.1| GTP pyrophosphokinase [Amycolatopsis mediterranei S699]
Length = 784
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 158/354 (44%), Positives = 218/354 (61%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 84 RAYDVAEELHRNQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYAVES 143
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA+LV+GV+KL ++ + EA+ + M +AMA D R ++IKLA
Sbjct: 144 LKADFGDKVAELVDGVTKLDKVQ--------LGSSAEAETIRKMVIAMAKDPRVLVIKLA 195
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 196 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 255
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + S I L L I+ V GR K YSIH KM+ + +D+I
Sbjct: 256 VRLVADRAPSRDIYLRSVITDLTSNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 314
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G P
Sbjct: 315 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 374
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H+ + + E W R +L WQ EA
Sbjct: 375 LEVQIRTYEMHRTAEYGIAAHWRYKETKGTHTGNAVDVDEMAWMRQLLDWQREA 428
>gi|295091158|emb|CBK77265.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium cf.
saccharolyticum K10]
Length = 761
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/411 (39%), Positives = 249/411 (60%), Gaps = 18/411 (4%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E ++ +A+ Q H V KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 24 EELYQDLIASIQRYHPSDDISMVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILADLE 83
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AG+LHD ++D ++ D + R FGA VA LV+GV+KL+ +S + +
Sbjct: 84 LDKETIVAGILHDVVEDTVMTTDGLAREFGAEVALLVDGVTKLTNISW-----DKDKVEM 138
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +L+KLADRLHNM TL + K++ A+ET++I+ P+A+RLG
Sbjct: 139 QAENLRKMFLAMAKDIRVILVKLADRLHNMRTLQYMKPEKQREKARETMDIYAPIADRLG 198
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 415
IS K +L++L K+L P+ + ELS K+ D EA V +++++ + D I V
Sbjct: 199 ISRIKTELDDLALKYLEPEVYYELSEKISLRKDAREAFVKGIVDEVKSHMDDAGIECKV- 257
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+K+ T+D+I+D++ +R+IV+ +DCY AL V+H+L+ +PG+ KD
Sbjct: 258 DGRVKHFFSIYKKMVKQNKTLDQIYDLFAVRIIVDTVKDCYAALGVIHELYKPIPGRFKD 317
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF-- 533
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE ++
Sbjct: 318 YIAMPKINNYQSLHTTLIGSSGQPFEIQIRTYEMHRVAEYGIAAHWKYKESGSTKAAMDS 377
Query: 534 VLQMVEWARWVLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKP 584
+ + W R +L WQ + MS ++ + DS+K S D F + P
Sbjct: 378 AEEKLSWLRQILEWQKD-MSDNKEFL---DSLKSDLDLFS---DSVFCFTP 421
>gi|302670706|ref|YP_003830666.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
gi|302395179|gb|ADL34084.1| RelA/SpoT family protein [Butyrivibrio proteoclasticus B316]
Length = 760
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 231/357 (64%), Gaps = 10/357 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ +A AH+GQ+R SG+PY++H + A++LA + + +AAGLLHD ++D +
Sbjct: 41 LIEKAYNQAAEAHQGQLRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTICT 100
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT---VEADRLHTMFLAMA-DARA 315
+ I +FGA VA LV+GV+KL+ L +L+ +N ++ ++A L MFLAMA D R
Sbjct: 101 KEEIQESFGADVALLVDGVTKLTAL-QLSTDNTNKTQEQIDMQAQNLRKMFLAMAKDIRV 159
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+LIKLADRLHNM TL +P K+QR A+ETL+I+ P+A RLGIS KV+L++L K+L P
Sbjct: 160 ILIKLADRLHNMRTLAHMPPEKQQRIAQETLDIYSPIAGRLGISRIKVELDDLSLKYLKP 219
Query: 376 DQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
D + +L K + + E V E + A+K I V GR K +SI+ KM +
Sbjct: 220 DVYYDLVDKVSIRKSEREKYVEDICENVRDAIKTAGIEGEV-NGRVKHFFSIYKKMRNQN 278
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T+D+I+D++ +R+IV +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT +
Sbjct: 279 KTLDQIYDLFAIRIIVATVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLI 338
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHS-SFVLQMVEWARWVLTWQ 548
G+ P E+QIRT +MH AE+G AAHW+YKE D + + + + + W R +L WQ
Sbjct: 339 GQTGQPFEIQIRTYDMHKAAEYGIAAHWKYKETSDGKKAENGEEEKLTWLRQILEWQ 395
>gi|78778579|ref|YP_396691.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9312]
gi|78712078|gb|ABB49255.1| metal dependent phosphohydrolase [Prochlorococcus marinus str. MIT
9312]
Length = 769
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 224/363 (61%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ ++KAF A +AH GQ RASG+PY++H V A LL IGA+++V+AAGLLHD ++D
Sbjct: 60 QNLLVKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASTSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLSEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 377 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYKDLKDQIAVKRSDREKRLKVTLNLMKENLVSAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT MH AE+G AAHW+YKEG S + W R ++ WQ E
Sbjct: 354 RHR-PIEVQIRTTSMHQIAEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNEG 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|312110098|ref|YP_003988414.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|336234522|ref|YP_004587138.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|423719137|ref|ZP_17693319.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215199|gb|ADP73803.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y4.1MC1]
gi|335361377|gb|AEH47057.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus thermoglucosidasius
C56-YS93]
gi|383368040|gb|EID45315.1| (p)ppGpp synthetase I spoT/relA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 731
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 222/356 (62%), Gaps = 10/356 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A+RAHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D
Sbjct: 26 EFIKKAYEFADRAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + R FG+ VA LV+GV+KL ++ ++E +A+ MFLAMA D R +L
Sbjct: 86 TKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKKKRAEREQYLEEVIQEVRERLNEVSIP-CEIYGRPKHIYSIYRKMVMQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 319 KGEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|352095563|ref|ZP_08956577.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
gi|351678705|gb|EHA61850.1| (p)ppGpp synthetase I, SpoT/RelA [Synechococcus sp. WH 8016]
Length = 778
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 166/349 (47%), Positives = 213/349 (61%), Gaps = 14/349 (4%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQLESHFGPEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD----QHTELSSKLV 386
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+S+K
Sbjct: 194 GALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRS 253
Query: 387 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E D VT ++ L L + + GR K LY I KM +++ EI+D+ LR
Sbjct: 254 EREDRLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALR 311
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
++ N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT
Sbjct: 312 ILAPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRT 370
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
EMH +EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 371 WEMHQVSEFGIAAHWKYKEGGSPATGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|443325885|ref|ZP_21054559.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
gi|442794512|gb|ELS03925.1| (p)ppGpp synthetase, RelA/SpoT family [Xenococcus sp. PCC 7305]
Length = 750
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 160/374 (42%), Positives = 227/374 (60%), Gaps = 18/374 (4%)
Query: 181 YAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGAN 240
+ ++ L Q++ + + +AF A H GQ R SG+PY+ H V A LL +G +
Sbjct: 19 WLRQCLLEDQVEQSNQDRNLICRAFNFAYNLHEGQYRKSGEPYIAHPVAVAGLLRDLGGD 78
Query: 241 STVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA 300
+AAG LHD ++D ++ + I FG V LVEGV+KLS+ N +++K +A
Sbjct: 79 CVTIAAGFLHDIVEDTDITPEQIEEMFGFEVRCLVEGVTKLSKF------NFSSTKERQA 132
Query: 301 DRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIS 359
+ MFLAMA D R +++KLADRLHNM TL+ L K++R A ET EIF PLANRLGI
Sbjct: 133 ENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEHLKPEKQRRIALETREIFAPLANRLGIG 192
Query: 360 TWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCG 417
+K +LE+LCFK+L P+ + E+ S + E EA + ++ L +++ I L L G
Sbjct: 193 RFKWELEDLCFKYLEPEAYREIQSLISERRSDREARIEKVLDTLRSQMENLGIKILELKG 252
Query: 418 RHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYI 477
R K LY I+ KM +++ +EI+DI +R+IVE E CY++L VVH + +PG+ KDYI
Sbjct: 253 RPKHLYGIYQKMQRQQKKFEEIYDIAAIRIIVEANEQCYRSLAVVHDAFKPIPGRFKDYI 312
Query: 478 TRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---------GDC 528
PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKE D
Sbjct: 313 GLPKPNRYQSLHTTVVGSNGRPLEVQIRTLEMHHIAEYGIAAHWKYKETGSSEAPVNSDD 372
Query: 529 QHSSFVLQMVEWAR 542
+ +++ Q++EW +
Sbjct: 373 EKFTWLRQLLEWQK 386
>gi|385676940|ref|ZP_10050868.1| GTP pyrophosphokinase [Amycolatopsis sp. ATCC 39116]
Length = 776
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/354 (46%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHRHQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 136 LTADFGDKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 187
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQVRKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I++L AL I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDIYLRKVIDELTGALGGSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 366
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 367 LEVQIRTYEMHHTAEYGIAAHWRYKETKGTHHGTAVDIDEMAWMRQLLDWQREA 420
>gi|266623547|ref|ZP_06116482.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
gi|288864647|gb|EFC96945.1| GTP diphosphokinase [Clostridium hathewayi DSM 13479]
Length = 779
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 243/375 (64%), Gaps = 11/375 (2%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E +A+ + H + KA++ A+ H+ Q R SG+PY++H + A++LA +
Sbjct: 44 EVLYQELIASIRRYHPSDDISMIEKAYHVADNFHKEQKRKSGEPYIIHPLCVAIILADLE 103
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ +AAG+LHD ++D ++ D + + FG VA LV+GV+KL+QLS + +
Sbjct: 104 MDKETIAAGILHDVVEDTVMTLDELGKEFGEEVALLVDGVTKLTQLSW-----SMDKMEL 158
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R ++IKLADRLHNM TL + K++ A+ET+EI+ P+A+RLG
Sbjct: 159 QAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMKPEKQKEKARETMEIYAPIAHRLG 218
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 415
IS K++L++L K+L PD + +L+ K+ D E+ V S ++++++ LK+ +I V
Sbjct: 219 ISKIKIELDDLSLKYLQPDVYYDLAEKISLKKDARESFVKSIVDEVQEHLKEASIVAKV- 277
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+L+ +PG+ KD
Sbjct: 278 DGRVKHFFSIYKKMVNQNKTLDQIYDLFAVRIIVDSVKDCYAALGVIHELYKPIPGRFKD 337
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV 534
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G Q ++
Sbjct: 338 YIAMPKPNMYQSLHTTLIGSNGQPFEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAAGK 397
Query: 535 -LQMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 398 EEEKLSWLRQILEWQ 412
>gi|220907977|ref|YP_002483288.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7425]
gi|219864588|gb|ACL44927.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7425]
Length = 748
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 221/356 (62%), Gaps = 13/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +AF A R H+GQ RASG+PY+ H V A LL +G ++ +VAAG LHD ++D +
Sbjct: 38 ELVCRAFNFAYRLHQGQRRASGEPYIAHPVAVAGLLRDLGGSAAMVAAGFLHDVIEDTTV 97
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG V LVEGV+KLS++ N + +A+ MFLAMA D R +
Sbjct: 98 TPEQLEAEFGPEVRQLVEGVTKLSKI-------NFSKTERQAESFRRMFLAMAQDIRVIF 150
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ LP KR+R A+ET ++F PLANRLGI +K +LE+L FK+L P+
Sbjct: 151 VKLADRLHNMRTLEYLPEEKRRRIAQETRDVFAPLANRLGIWRFKWELEDLSFKYLEPEA 210
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + E EA + AI L Q L+ N+ L GR K LYSI+ KM +++
Sbjct: 211 YRRMQDLVAEKRGIREAQLEDAIAILRQQLQPLNLKRCDLSGRPKHLYSIYQKMERQQKE 270
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI +R+IVE +++CY+ L +VH + VP + KDYI PK N YQSLHTVV +
Sbjct: 271 FHEIYDIAAIRVIVETKDECYRVLAIVHDCFKPVPNRFKDYIGLPKPNRYQSLHTVVIDQ 330
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD---CQHSSFVLQMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE QH + + W R +L Q
Sbjct: 331 GGRPLEVQIRTMEMHRVAEYGIAAHWKYKEVGHSLGQHLTTADEKFVWLRQLLDTQ 386
>gi|150016418|ref|YP_001308672.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
gi|149902883|gb|ABR33716.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium beijerinckii NCIMB
8052]
Length = 738
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 154/361 (42%), Positives = 225/361 (62%), Gaps = 14/361 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 EMVKKAYDFAEKAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEF 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SYD F A +A+LVEGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVSLFNAEIANLVEGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPAKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL + E E + + L+Q L + I + GR K YSI+ KM+ K +
Sbjct: 196 YYELVDSIAEKRVERETYINDIVNDLKQKLGNSGIESDI-DGRPKHFYSIYKKMVSKNKS 254
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 IEQIFDLTAIRVLVHSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTTVIGP 314
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVLTWQC 549
E+QIRT EMH AE+G AAHW+YKEGD + F ++V W R +L WQ
Sbjct: 315 QGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDNAKGEQDKQKDFEKKLV-WLRDMLEWQK 373
Query: 550 E 550
E
Sbjct: 374 E 374
>gi|452995059|emb|CCQ93294.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 723
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 229/375 (61%), Gaps = 19/375 (5%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AKE++++ +L D V KA+ AE+AH GQ+RASGDPY+ H + A +LA + +
Sbjct: 10 AKEYMSDDEL-------DMVRKAYLFAEKAHEGQLRASGDPYITHPLAVAGILADLHMDH 62
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+++A LLHD ++D + D + + FG VA+LV+GV+KL ++ ++E +A+
Sbjct: 63 VILSAALLHDVVEDTHATLDQVRQEFGVEVAELVDGVTKLRRIKYKSQEEQ------QAE 116
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
M LAMA D R +LIKLADRLHNM TL ++R A ETLEIF P+A+RLGIST
Sbjct: 117 NHRKMLLAMAKDVRVILIKLADRLHNMRTLKYRSEEDQRRIANETLEIFAPIAHRLGIST 176
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE++ +++NP Q+ + K E + +E++ L+D I + GR
Sbjct: 177 IKWELEDISLRYINPQQYYRIVHLMKKKRAEREKYIEKVMEEIRVKLEDLGIKCDI-SGR 235
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM + +EI+D+ +R+IVEN DCY L VVH LW +PG+ KDYI
Sbjct: 236 PKHIYSIYRKMFLQHKEFNEIYDLLAIRIIVENVRDCYAVLGVVHTLWKPMPGRFKDYIA 295
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQ 536
PK N YQSLHT V G PLEVQIRT+EMH AE+G AAHW YKEG + + Q
Sbjct: 296 MPKANLYQSLHTTVIGPEGEPLEVQIRTQEMHRTAEYGIAAHWAYKEGKRLKGNDKYGEQ 355
Query: 537 MVEWARWVLTWQCEA 551
+ W R +L +Q E+
Sbjct: 356 RLSWFRELLEYQQES 370
>gi|257064877|ref|YP_003144549.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
gi|256792530|gb|ACV23200.1| (p)ppGpp synthetase, RelA/SpoT family [Slackia heliotrinireducens
DSM 20476]
Length = 789
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 228/359 (63%), Gaps = 13/359 (3%)
Query: 198 EDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 255
ED ++ KA+ AE AH+GQ R SG+P++ H VE A++LA + + + A LLHDT++D
Sbjct: 64 EDMLLLEKAYRFAESAHKGQKRKSGEPFIAHPVEVALILADLRMDVDTLCAALLHDTVED 123
Query: 256 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DAR 314
+++ + TF VA+LVEGV+K++Q+ + + A+ + MF+AM+ D R
Sbjct: 124 TDVTHKDLLDTFNESVANLVEGVTKITQVEVESLTDEQAAT------IRKMFVAMSHDIR 177
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
++IKLADRLHNM TL AL +R A ETLEI+ P+A+RLGI + K +LE+L F +L+
Sbjct: 178 VIVIKLADRLHNMRTLSALREDRRIFKAHETLEIYAPIAHRLGIGSIKWELEDLSFYYLD 237
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P + +++ + E EA ++ IE L + D NI + GR K LYSI+ KM+ +
Sbjct: 238 PARFKQIAQMVAESRAQREAYLSRVIETLRDDVNDLNIKAHI-AGRPKHLYSINQKMINR 296
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ EI+D+ +R+IVE+ +DCY L VH LW +PG+ KDYI PK NGYQSLHT V
Sbjct: 297 EKGFSEIYDLIAVRIIVESVKDCYSVLGSVHSLWHPMPGRFKDYIAMPKANGYQSLHTTV 356
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 550
G PLEVQIRT+EMH +E+G AAHWRYKE G+ + + + + W R ++ WQ E
Sbjct: 357 IGPAGRPLEVQIRTEEMHRLSEYGVAAHWRYKEKGNSKADAAFDKQIAWLRQMVDWQDE 415
>gi|336424063|ref|ZP_08604110.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336012840|gb|EGN42733.1| hypothetical protein HMPREF0994_00116 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 809
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 227/356 (63%), Gaps = 11/356 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH GQ+R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 88 KAYKIAYAAHEGQVRKSGEPYIIHPLCVAIILADLELDKETIEAGLLHDVVEDTIMTEAE 147
Query: 263 IFRTFGAGVADLVEGVSKLSQLS----KLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
I + FG VA LV+GV+KL Q+ K EN TA + ++A+ L MFLAMA D R +
Sbjct: 148 IEKEFGPDVALLVDGVTKLQQIDFPSDKGNGENKTADQQEMQAENLRKMFLAMAKDIRVI 207
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
+IKLADRLHNM TL P K+Q+ A+ET+EI+ P+A RLGIS KV+L++L K+L P+
Sbjct: 208 MIKLADRLHNMRTLKYQPPAKQQKIARETMEIYAPIAQRLGISKIKVELDDLSLKYLEPE 267
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ +L K+ E + ++++ + +K+ I + GR K +SI+ KM +
Sbjct: 268 VYYDLVDKIAVRRSEREEYIQQIVDEVSEHMKNAGIKSQI-DGRVKHFFSIYKKMKNQSK 326
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 327 TLDQIYDLFAVRIIVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKANMYQSLHTTVIG 386
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AEFG AAHW+YKE + ++ + + W R +L WQ
Sbjct: 387 SSGQPFEIQIRTMEMHKAAEFGIAAHWKYKEASDGKKVAAQEEEKLAWLRQILEWQ 442
>gi|157412548|ref|YP_001483414.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
gi|157387123|gb|ABV49828.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9215]
Length = 769
Score = 292 bits (748), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 224/363 (61%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ + KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIAKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLYEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 377 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+N + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 HFHEIYDVAALRIIVDNSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT MH AE+G AAHW+YKEG S + W R ++ WQ E +
Sbjct: 354 RHR-PIEVQIRTTSMHQIAEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNER 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|410724219|ref|ZP_11363418.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
gi|410602505|gb|EKQ56985.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. Maddingley
MBC34-26]
Length = 738
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 155/366 (42%), Positives = 228/366 (62%), Gaps = 22/366 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA++ AE+AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 NMVEKAYHFAEQAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SYD + F A +A+LVEGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYDETVKLFNAEIANLVEGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ EL + E + + +V EKLE + +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVKDLYEKLETSGIHSDID-----GRPKHFYSIYKKMVS 250
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 251 KNKSIEQIFDLTAIRVLVHSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTT 310
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC------QHSSFVLQMVEWARWVL 545
V G E+QIRT EMH AE+G AAHW+YKEGD + F ++V W R +L
Sbjct: 311 VIGPQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDAGKPEQDKQKDFEKKLV-WLRDML 369
Query: 546 TWQCEA 551
WQ E
Sbjct: 370 EWQKET 375
>gi|150390117|ref|YP_001320166.1| (p)ppGpp synthetase I SpoT/RelA [Alkaliphilus metalliredigens QYMF]
gi|149949979|gb|ABR48507.1| (p)ppGpp synthetase I, SpoT/RelA [Alkaliphilus metalliredigens
QYMF]
Length = 727
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 217/354 (61%), Gaps = 11/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ +I+A++ E AH+GQ R SG+ Y +H VE A +L + +S+ +AAGLLHD ++D
Sbjct: 19 ELIIRAYHYGENAHQGQYRKSGEQYFIHPVEVAKILIELKMDSSTIAAGLLHDVIEDTPY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
Y + FG VA+LVEGV+KL++LS ++E +A+ L MF+AMA D R VL
Sbjct: 79 GYGKVREEFGEEVAELVEGVTKLTRLSFESKEER------QAENLRKMFIAMAKDIRVVL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL K++ A ETLEIF P+A+RLGIS K +LE+LC +++P+
Sbjct: 133 IKLADRLHNMRTLKYQSDEKKKEKAMETLEIFAPIAHRLGISRIKWELEDLCLLYIDPEG 192
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E + I L+ + + I + GR K YSI+ KM+ + +
Sbjct: 193 YYDLVDKVAKKRRDRETFINKVISILDGKMDEFGIENEI-SGRPKHFYSIYRKMVYQNKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI D R+IV N +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 FDEIFDFIAFRVIVNNVKDCYGILGIVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 548
P E+QIRTKEMH AEFG AAHW YKEG ++ + + W R +L W+
Sbjct: 312 NGEPFEIQIRTKEMHQIAEFGIAAHWSYKEGKSINNEDDMDTKLTWLRQMLEWE 365
>gi|348027280|ref|YP_004767085.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
gi|341823334|emb|CCC74258.1| GTP diphosphokinase [Megasphaera elsdenii DSM 20460]
Length = 734
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 228/355 (64%), Gaps = 13/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ AE AH+ Q R SG+PY+LH + A +LA + ++T + A LLHD ++D
Sbjct: 27 DDVTKAYQLAEEAHKDQRRVSGEPYILHPLAVAQILADMKIDTTTITASLLHDVVEDTSY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + + FG VA LV+GV+KLS+L+ +E+ + + + MFLAMA D R V+
Sbjct: 87 TLDDLKKMFGKEVAFLVDGVTKLSRLNYRTKEDQ------QLNSMRKMFLAMAKDVRVVV 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++R A+ETLEIF PLA+RLGI K +LE+L F++L PD+
Sbjct: 141 IKLADRLHNMRTLRYMRSDKQKRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDK 200
Query: 378 HTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ + E +V AI+ L++AL + +I + GR K YSI+ KM K
Sbjct: 201 YYDLVDQMKQKRHVREEIVNEAIDVLKKALDEAHIH-CEINGRPKHFYSIYKKMKKDNRD 259
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +++D++ +R+IV++ +DCY L +VH LW +P + KDYI PK N YQSLHT V G
Sbjct: 260 LSQVYDLFAIRVIVDDVKDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGT 319
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH AE+G AAHWRYKEG+ +F +M W R +L WQ
Sbjct: 320 RGQPVEIQIRTWEMHRIAEYGVAAHWRYKEGNQTANKDAFDEKM-GWLRNLLEWQ 373
>gi|315651813|ref|ZP_07904817.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
gi|315485943|gb|EFU76321.1| GTP diphosphokinase [Lachnoanaerobaculum saburreum DSM 3986]
Length = 762
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 227/354 (64%), Gaps = 11/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 48 MITKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTVIT 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 YNELADMFGIDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K Q L + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFSQHLSATGMKY-TINGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ DCY AL H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVESVTDCYLALGTAHEIYKPIPGRFKDYIAMPKTNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE + + + W R +L WQ
Sbjct: 342 GQPFEVQIRTYEMHKTAEFGIAAHWKYKESGSGSEAKGAEDAKMNWLRQILEWQ 395
>gi|427717556|ref|YP_007065550.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 7507]
gi|427349992|gb|AFY32716.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 7507]
Length = 756
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 163/358 (45%), Positives = 221/358 (61%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A R H+GQ R SG+PY+ H V A LL +G ++ ++AAG LHD ++D ++
Sbjct: 43 LIGEAFKFAYRLHQGQYRKSGEPYICHPVAVAGLLRDLGGSAAMIAAGFLHDVVEDTDVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG V LVEGV+KLS++ N SKT +A+ MFL+MA D R ++
Sbjct: 103 IEQIGELFGPEVRQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLSMAQDIRVIV 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL +P KR+R A+ET +IF PLANRLGI +K +LE+L FK+L P+
Sbjct: 156 VKLADRLHNMRTLQVMPDDKRRRIAQETRDIFAPLANRLGIWHFKWELEDLSFKYLEPES 215
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
E+ + E E + A L++ LK I L + GR K LYSI+ KM +++
Sbjct: 216 FREIQQHVAEKRTSREEKLARATTILQERLKQAGIECLDVSGRPKHLYSIYQKMQRQQKE 275
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 FHEIYDLAALRIIVRTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 335
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLEVQIRT+EMH AE+G AAHW+YKE + S + E W R +L WQ +
Sbjct: 336 TGRPLEVQIRTQEMHHIAEYGIAAHWKYKETGGSNVSNLTTSDEKFTWLRQLLEWQSD 393
>gi|56421113|ref|YP_148431.1| GTP pyrophosphokinase [Geobacillus kaustophilus HTA426]
gi|375009672|ref|YP_004983305.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
gi|56380955|dbj|BAD76863.1| GTP pyrophosphokinase (ppGpp synthetase) [Geobacillus kaustophilus
HTA426]
gi|359288521|gb|AEV20205.1| GTP pyrophosphokinase [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 732
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 320 GEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|312135681|ref|YP_004003019.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor owensensis
OL]
gi|311775732|gb|ADQ05219.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor owensensis
OL]
Length = 726
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 228/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHEGQARSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + I R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDIEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET+EI+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIEIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 317 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRVK-STDEDEKFAWLRELLEWQKE 373
>gi|307155133|ref|YP_003890517.1| (p)ppGpp synthetase I SpoT/RelA [Cyanothece sp. PCC 7822]
gi|306985361|gb|ADN17242.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. PCC 7822]
Length = 750
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 221/355 (62%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H+GQ R SG+PY+ H + A LL +G +ST++AAG LHD ++D ++
Sbjct: 42 LICRAFNFAYELHKGQYRKSGEPYIAHPIAVAGLLRDLGGDSTMIAAGFLHDVVEDTEVT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I + FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 102 LEDIEQRFGDEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 154
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++ A ET EIF PLANRLGI +K +LE+LCFK+L P+
Sbjct: 155 VKLADRLHNMRTLEHLATEKQRSIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPEA 214
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + + E E + E + + L ++ L + GR K LY I+ KM +++
Sbjct: 215 YREIQALVAEKRIDRETRIEQITETIREGLHQIGVNVLEIQGRPKHLYGIYHKMQRQRKE 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LR+IVE +++CY+AL +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 FHEIYDIAALRIIVETKDECYRALAIVHDVFKPIPGRFKDYIGLPKSNRYQSLHTTVVGF 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW+YKE + + + W R ++ WQ
Sbjct: 335 TGRPLEVQIRTLEMHHIAEYGIAAHWKYKESGGSNYNLTSEDEKFTWLRQLIEWQ 389
>gi|384440422|ref|YP_005655146.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
gi|359291555|gb|AEV17072.1| Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase (PpGpp
synthase) [Thermus sp. CCB_US3_UF1]
Length = 726
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 163/372 (43%), Positives = 235/372 (63%), Gaps = 27/372 (7%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V A+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ VAAGLLHDT++D ++
Sbjct: 26 VKAAYLFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDAETVAAGLLHDTVEDCGVAP 85
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG GV +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPGVRRIVEGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLGI K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPPHKQRRIAQETLEIYAPLAHRLGIGQLKWELEDLSFRYLHPEAYH 202
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKK 432
L S++ E + E ++ A+ LE+AL+ + + GR K LYSI KM ++
Sbjct: 203 ALLSRIQETQEARERVIHRAMAILEEALRKDELLQAQLQGFEVTGRPKHLYSIWKKMERE 262
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPAPTEEGQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + +
Sbjct: 323 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRI 380
Query: 539 EWARWVLTWQCE 550
W R + WQ E
Sbjct: 381 SWLRSIQEWQQE 392
>gi|283795474|ref|ZP_06344627.1| GTP diphosphokinase [Clostridium sp. M62/1]
gi|291077138|gb|EFE14502.1| RelA/SpoT family protein [Clostridium sp. M62/1]
Length = 761
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/390 (40%), Positives = 241/390 (61%), Gaps = 18/390 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 45 MVEKAYRLAFEAHKDQKRKSGEPYIIHPLCVAIILADLELDKETIVAGILHDVVEDTVMT 104
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R FGA VA LV+GV+KL+ +S + ++A+ L MFLAMA D R +L+
Sbjct: 105 TDGLAREFGAEVALLVDGVTKLTNISW-----DKDKVEMQAENLRKMFLAMAKDIRVILV 159
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ +
Sbjct: 160 KLADRLHNMRTLQYMKPEKQREKARETMDIYAPIADRLGISRIKTELDDLALKYLEPEVY 219
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
ELS K+ D EA V +++++ + D I V GR K +SI+ KM+K+ T+
Sbjct: 220 YELSEKISLRKDAREAFVKGIVDEVKSHMDDAGIECKV-DGRVKHFFSIYKKMVKQNKTL 278
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IV+ +DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G
Sbjct: 279 DQIYDLFAVRIIVDTVKDCYAALGVIHELYKPIPGRFKDYIAMPKINNYQSLHTTLIGSS 338
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF--VLQMVEWARWVLTWQCEAMSK 554
P E+QIRT EMH AE+G AAHW+YKE ++ + + W R +L WQ + MS
Sbjct: 339 GQPFEIQIRTYEMHRVAEYGIAAHWKYKESGSTKAAMDSAEEKLSWLRQILEWQKD-MSD 397
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKP 584
++ + DS+K S D F + P
Sbjct: 398 NKEFL---DSLKSDLDLFS---DSVFCFTP 421
>gi|15895542|ref|NP_348891.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum ATCC 824]
gi|337737491|ref|YP_004636938.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
gi|384459001|ref|YP_005671421.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
acetobutylicum EA 2018]
gi|15025278|gb|AAK80231.1|AE007728_10 RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolases
[Clostridium acetobutylicum ATCC 824]
gi|325509690|gb|ADZ21326.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum EA 2018]
gi|336292295|gb|AEI33429.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Clostridium acetobutylicum DSM 1731]
Length = 740
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 158/368 (42%), Positives = 226/368 (61%), Gaps = 19/368 (5%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D VIKA+ A AH+ QMR SG+PY+ H ++ A +LA +G + + + AG+LHD ++D
Sbjct: 20 KDIVIKAYNFAYEAHKHQMRESGEPYISHPLDVACILAEMGMDMSTIVAGILHDVIEDTS 79
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
SYD I F VADLV GV+KL +++ +E +AD + M LAMA D R +
Sbjct: 80 YSYDDITEMFSKEVADLVSGVTKLDKITYKTKEEQ------QADNVRKMLLAMAKDIRVI 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL K++ AKETL+I+ PLA+RLG+S K +LE+L F++L P
Sbjct: 134 LIKLADRLHNMRTLKFKREQKQKEKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLKPK 193
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ EL + E E ++ +E+L+ L+ I+ + GR K YSI+ KML K
Sbjct: 194 EYYELVDLIAEKRVEREEYISKIVEELKLNLEASGITPDI-DGRPKHFYSIYRKMLNKSK 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++D+I D+ +R++V N ++CY AL +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 253 SLDQIFDLTAVRILVNNIKECYAALGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ---------MVEWARWVL 545
P E+QIRT +MH AE+G AAHW+YKEG + + V Q + W R +L
Sbjct: 313 PEGKPFEIQIRTYDMHKTAEYGIAAHWKYKEGTIESTQNVPQNKNANKDDTKLTWIREML 372
Query: 546 TWQCEAMS 553
WQ E S
Sbjct: 373 EWQRETPS 380
>gi|312898881|ref|ZP_07758269.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
gi|310620043|gb|EFQ03615.1| GTP diphosphokinase [Megasphaera micronuciformis F0359]
Length = 732
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 224/350 (64%), Gaps = 11/350 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+ Q R +GDPY+LH + A +LA + ++T + A LLHD ++D +
Sbjct: 31 KAYELADEAHKEQKRVNGDPYILHPLAVAEILADMEIDTTTITASLLHDVVEDTEYMLED 90
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 91 IERIFGKEVAFLVDGVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDIRVVVIKLA 144
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L
Sbjct: 145 DRLHNMRTLKYMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDL 204
Query: 382 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E E +V AI+ L++ L + +ISF + GR K YSI+ KM K + +I
Sbjct: 205 VDQMKEKRKVREEIVNEAIDVLKKTLTESSISFEI-NGRPKHFYSIYKKMKKDNRDLSQI 263
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N YQSLHT V G P
Sbjct: 264 YDLYAIRVIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP 323
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDC-QHSSFVLQMVEWARWVLTWQ 548
+E+QIRT +MH AE+G AAHWRYKEG Q ++ + + W R +L WQ
Sbjct: 324 VEIQIRTWDMHHIAEYGVAAHWRYKEGRASQKATGFDEKMGWLRNMLEWQ 373
>gi|261418406|ref|YP_003252088.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297529258|ref|YP_003670533.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. C56-T3]
gi|319767635|ref|YP_004133136.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. Y412MC52]
gi|448238857|ref|YP_007402915.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
gi|261374863|gb|ACX77606.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC61]
gi|297252510|gb|ADI25956.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. C56-T3]
gi|317112501|gb|ADU94993.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. Y412MC52]
gi|445207699|gb|AGE23164.1| GTP pyrophosphokinase [Geobacillus sp. GHH01]
Length = 732
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 320 GEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|354616924|ref|ZP_09034463.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
gi|353218722|gb|EHB83422.1| (p)ppGpp synthetase I, SpoT/RelA [Saccharomonospora paurometabolica
YIM 90007]
Length = 778
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 225/359 (62%), Gaps = 24/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 77 RAYDVAEERHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQ 136
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V+ LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 137 LGEDFGEKVSQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 188
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 189 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 248
Query: 382 SSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+LV + + ++ ++LE++ D + GR K YSIH KM+ ++
Sbjct: 249 V-RLVADRAPSRDTYLRWVIGELTKQLEESRVDAKVE-----GRPKHYYSIHQKMIVRER 302
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+D+IHD+ G+R++VE+ DCY A+ VVH LW +PG+ KDY+ +P+F YQSLHT V G
Sbjct: 303 ELDDIHDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYVAQPRFGVYQSLHTTVIG 362
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 363 PDGKPLEVQIRTYEMHRTAEYGIAAHWRYKETKGTHRGNAVDVDEMAWMRQLLDWQREA 421
>gi|404482346|ref|ZP_11017573.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
gi|404344507|gb|EJZ70864.1| RelA/SpoT family protein [Clostridiales bacterium OBRC5-5]
Length = 761
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 228/355 (64%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSNIFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K + L D + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ CY AL H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE G S +M W R +L WQ
Sbjct: 342 GQPFEVQIRTFEMHKTAEFGIAAHWKYKESGSGTSAQGSEDAKM-NWLRQILEWQ 395
>gi|390437740|ref|ZP_10226267.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
gi|389838856|emb|CCI30391.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis sp. T1-4]
Length = 765
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 220/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ ++ S K ++ E+ + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRQVQLLVSEKRID--RESRIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE H++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSHTTLTAADEKFAWLRNLLDWQ 396
>gi|332981509|ref|YP_004462950.1| (p)ppGpp synthetase I SpoT/RelA [Mahella australiensis 50-1 BON]
gi|332699187|gb|AEE96128.1| (p)ppGpp synthetase I, SpoT/RelA [Mahella australiensis 50-1 BON]
Length = 719
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 154/371 (41%), Positives = 227/371 (61%), Gaps = 13/371 (3%)
Query: 190 QLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 247
+LK ED ++ KA+ AE AHRGQ R SG+ Y++H V+ A++LA +G +++ + AG
Sbjct: 8 RLKQSYTSEDVEYINKAYEFAENAHRGQARVSGEAYIIHPVQVALILADLGMDASTICAG 67
Query: 248 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 307
LLHD L+D +YD + + FG +ADLVEGV+KL +L + K +A+ L MF
Sbjct: 68 LLHDVLEDTDYTYDDLAKLFGKEIADLVEGVTKLGKLE------FQSKKEAQAENLRKMF 121
Query: 308 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 366
+AMA D R ++IKLADRLHNM TL L + R A+ET+EI+ PLA+RLGI K +LE
Sbjct: 122 IAMAKDVRVIMIKLADRLHNMRTLRYLDKESQLRNAQETMEIYAPLAHRLGIFKIKWELE 181
Query: 367 NLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
+L ++L+P+ + +L K+ E + I L++ + + I V GR K YS
Sbjct: 182 DLSLRYLDPEAYYDLVDKVAAKRKQREEYINQVITALKERIAETGIEATV-DGRPKHFYS 240
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I+ KM + ++I+D+ +R+IV DCY L ++H +W +PG+ KDYI PK N
Sbjct: 241 IYKKMKYQGKAFEQIYDLMAVRVIVNTVRDCYAVLGLIHTIWKPIPGRFKDYIAVPKPNM 300
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 544
YQSLHT V G P+E+Q+RT +MH AE+G AAHW+YKEG +++ ++ W R +
Sbjct: 301 YQSLHTTVVGPQGEPVEIQVRTWDMHRTAEYGIAAHWKYKEGRLKNTDLDSKLA-WLRQI 359
Query: 545 LTWQCEAMSKD 555
L WQ + D
Sbjct: 360 LEWQSDDRDAD 370
>gi|434402920|ref|YP_007145805.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
gi|428257175|gb|AFZ23125.1| (p)ppGpp synthetase, RelA/SpoT family [Cylindrospermum stagnale PCC
7417]
Length = 756
Score = 292 bits (747), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 161/358 (44%), Positives = 222/358 (62%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H+GQ R SG+PY+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 43 LICRAFQFAYQLHQGQYRKSGEPYIGHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
D I FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 103 IDQIEERFGPEVRQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL +P KR+R A+ET +IF PLANRLGI +K +LE+L FK+L P+
Sbjct: 156 VKLADRLHNMRTLQFMPDEKRRRIAQETRDIFAPLANRLGIWQFKWELEDLAFKYLEPEA 215
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++ + + E E +T + L Q L+ + + + GR K LY I+ KM +++
Sbjct: 216 FRQIQTYVSEKRAAREEKLTKVTDILRQRLQQAGVRCVDVSGRTKHLYGIYQKMHRQQKE 275
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 FHEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVMGL 335
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLEVQIRT+EMH AE+G AAHW+YKE ++S V E W R +L WQ +
Sbjct: 336 TGRPLEVQIRTQEMHHVAEYGIAAHWKYKESGGSNNSQVTGTDEKFTWLRQLLDWQSD 393
>gi|10443847|gb|AAG17607.1|AF242653_1 ppGpp synthetase/hydrolase Rel [Geobacillus stearothermophilus ATCC
7953]
Length = 732
Score = 291 bits (746), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 156/355 (43%), Positives = 221/355 (62%), Gaps = 10/355 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ A+ AHR Q R SG+PY++H ++ A +L + ++T +AAG LHD ++D +
Sbjct: 27 FLKKAYEFAKHAHRDQFRKSGEPYIIHPIQVAGILVDLKMDATTIAAGFLHDVIEDTEAT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FGA VA LV+GV+KL ++ ++E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEVRERLNEVHIP-CEISGRPKHIYSIYRKMVMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 320 GEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|126700359|ref|YP_001089256.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|254976339|ref|ZP_05272811.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-66c26]
gi|255093724|ref|ZP_05323202.1| putative GTP pyrophosphokinase [Clostridium difficile CIP 107932]
gi|255101915|ref|ZP_05330892.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-63q42]
gi|255307784|ref|ZP_05351955.1| putative GTP pyrophosphokinase [Clostridium difficile ATCC 43255]
gi|255315476|ref|ZP_05357059.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-76w55]
gi|255518139|ref|ZP_05385815.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-97b34]
gi|255651255|ref|ZP_05398157.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-37x79]
gi|260684319|ref|YP_003215604.1| GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260687978|ref|YP_003219112.1| GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296452442|ref|ZP_06894143.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296877791|ref|ZP_06901817.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|306521098|ref|ZP_07407445.1| putative GTP pyrophosphokinase [Clostridium difficile QCD-32g58]
gi|384361963|ref|YP_006199815.1| GTP pyrophosphokinase [Clostridium difficile BI1]
gi|423081063|ref|ZP_17069675.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|423085064|ref|ZP_17073522.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|423089842|ref|ZP_17078191.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
gi|115251796|emb|CAJ69631.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium difficile 630]
gi|260210482|emb|CBA64959.1| putative GTP pyrophosphokinase [Clostridium difficile CD196]
gi|260213995|emb|CBE06110.1| putative GTP pyrophosphokinase [Clostridium difficile R20291]
gi|296258772|gb|EFH05666.1| GTP diphosphokinase [Clostridium difficile NAP08]
gi|296431242|gb|EFH17063.1| GTP diphosphokinase [Clostridium difficile NAP07]
gi|357550919|gb|EHJ32724.1| GTP diphosphokinase [Clostridium difficile 050-P50-2011]
gi|357551372|gb|EHJ33162.1| GTP diphosphokinase [Clostridium difficile 002-P50-2011]
gi|357557606|gb|EHJ39140.1| GTP diphosphokinase [Clostridium difficile 70-100-2010]
Length = 735
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 219/354 (61%), Gaps = 12/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A++AH GQ R SG+PY +H + A +L + + + AGLLHD ++D
Sbjct: 23 EMVEKAYNLAKKAHEGQYRKSGEPYFIHPLAVANILIEMELDIETITAGLLHDVVEDTEY 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I + FG VADLV+GV+KL Q+ ++E +++ L MFLAMA D R +L
Sbjct: 83 TYEDIKKEFGKEVADLVDGVTKLGQIKYRSKEE------TQSENLRKMFLAMAKDIRVIL 136
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K + AKETLEI+ +A+RLGIS K +LE+ + ++P+
Sbjct: 137 IKLADRLHNMRTLKYMPPEKAKYKAKETLEIYGGIAHRLGISKIKWELEDRALRFMDPEG 196
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKL 434
+ +L S++ + I+ + + LKDK + C GR K YSI+ KM KK
Sbjct: 197 YYDLVSRV--SMKRSQREDYIQGIVELLKDKFKDLSIPCDVYGRPKHFYSIYRKMQKKHK 254
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T +EI D+ +R++V+N +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 TFEEIFDLTAVRILVDNVKDCYAVLGIVHTLWRPIPGRFKDYIAMPKPNMYQSLHTTVVG 314
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE G AAHW+YKEG S V + ++W R ++ W+
Sbjct: 315 PDGEPLEIQIRTHEMHNIAENGIAAHWKYKEGISSKESKVEEKLQWLRQMMEWE 368
>gi|425440615|ref|ZP_18820913.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
gi|389718904|emb|CCH97199.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9717]
Length = 765
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLISRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE H++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSHTTLTAEDEKFAWLRNLLDWQ 396
>gi|383827879|ref|ZP_09982968.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
gi|383460532|gb|EID52622.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora
xinjiangensis XJ-54]
Length = 782
Score = 291 bits (745), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 161/354 (45%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTDEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L + L++ +S V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTRQLEESRLSAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 371
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 372 LEVQIRTHEMHRTAEYGIAAHWRYKETKGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|37522317|ref|NP_925694.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
gi|35213317|dbj|BAC90689.1| (p)ppGpp 3'-pyrophosphohydrolase [Gloeobacter violaceus PCC 7421]
Length = 758
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 224/355 (63%), Gaps = 12/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A R H GQ RASG+PY+LH V+ A +L +G++S +VAAG LHD ++D +
Sbjct: 59 LIARAFDFAYRLHTGQNRASGEPYILHPVQVAGMLRELGSDSAMVAAGFLHDIIEDTATT 118
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + + FG V LVEGV+KLS+ + ++E +A+ MFLAMA D R +++
Sbjct: 119 SEDLEQLFGEQVRLLVEGVTKLSKFTFDSKEER------QAENFRRMFLAMAQDIRVIVV 172
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD LP K++R A+ET++IF PLANRLGI +K +LE+L FK+L+PD +
Sbjct: 173 KLADRLHNMRTLDFLPTHKQRRIAQETMDIFAPLANRLGIWRFKWELEDLAFKYLDPDAY 232
Query: 379 TELSSKLV---ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ KLV E + ++ + + ++I + GR K L+ I+ KM +++
Sbjct: 233 RHMQ-KLVSQKRAEREQFIDQVVQTIRAEIDRQHIHGEI-TGRPKHLWGIYQKMQRQQKE 290
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ +R+IVE +E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 291 FHEIYDVSAVRIIVEQQEECYRALSIVHNKFRPIPGRFKDYIGLPKPNRYQSLHTAVVGP 350
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT +MH AE+G AAHW+YKE + + W R +L WQ +
Sbjct: 351 EGKPLEVQIRTVDMHRIAEYGIAAHWKYKEAGSVVVASQEEKFTWLRQLLDWQSD 405
>gi|302527845|ref|ZP_07280187.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
gi|302436740|gb|EFL08556.1| GTP pyrophosphokinase [Streptomyces sp. AA4]
Length = 777
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 218/355 (61%), Gaps = 15/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 76 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLEQ 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V +LV+GV+KL ++ KL + EA+ + M +AMA D R ++IKLA
Sbjct: 136 LKADFGDKVGELVDGVTKLDKV-KLG-------TSAEAETIRKMVIAMAKDPRVLVIKLA 187
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 247
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I L L I+ V GR K YSIH KM+ + +D+I
Sbjct: 248 VRLVADRAPSRDTYLRKVIADLTNNLVSSRITAKV-EGRPKHYYSIHQKMIVRGRDLDDI 306
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW VPG+ KDYI +P+F YQSLHT V G P
Sbjct: 307 HDLVGVRILVEDVRDCYAAMGVVHALWQPVPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 366
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS---FVLQMVEWARWVLTWQCEA 551
LEVQIRT +MH AE+G AAHWRYKE H+S L + W R +L WQ EA
Sbjct: 367 LEVQIRTYDMHRTAEYGIAAHWRYKETKGTHASNNAMELDEIAWMRQLLDWQREA 421
>gi|402313175|ref|ZP_10832096.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
gi|400366935|gb|EJP19955.1| putative GTP diphosphokinase [Lachnospiraceae bacterium ICM7]
Length = 761
Score = 291 bits (745), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 228/355 (64%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MISKAYELAKKAHNDQKRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSDIFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K + L D + + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKFNEHLSDTGMKYQI-SGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ CY AL H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTAHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE G S +M W R +L WQ
Sbjct: 342 GQPFEVQIRTFEMHKTAEFGIAAHWKYKESGSGTSAQGSEDAKM-NWLRQILEWQ 395
>gi|440780767|ref|ZP_20959238.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
gi|440221355|gb|ELP60560.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Clostridium
pasteurianum DSM 525]
Length = 736
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 226/369 (61%), Gaps = 21/369 (5%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++F+ KA+ A AH+ Q R SG+PY++H E A +LA +G + +AAGLLHD ++D
Sbjct: 18 KNFINKAYNFAMNAHKKQKRESGEPYIIHPEEVACILAEMGMDQNTIAAGLLHDVIEDTE 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+++ + R F VA+LVEGV+KL ++S +E +AD + M LAMA D R +
Sbjct: 78 YTHEDLTREFNGEVANLVEGVTKLGKISYKTKEEQ------QADNVRKMLLAMAKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKL+DRLHNM TL + K++ AKETL+IF PLA+RLGIS K +LE+L F+++ P+
Sbjct: 132 LIKLSDRLHNMRTLKYMSASKQKEKAKETLDIFAPLAHRLGISKIKWELEDLAFRYIKPN 191
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ EL + E E + I +L + L+D NI + GR K YSI+ KM+ K
Sbjct: 192 EYYELVDDIAEKRVEREEYIRGIISELYKNLEDANI-MADIDGRPKHFYSIYRKMVNKNK 250
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I D+ +R++V + +CY L +VH ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 251 TLDQIFDLTAIRILVNDIRECYTVLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHSTVIG 310
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWARWV 544
E+QIRT EMH AE+G AAHW+YKEG + + + F ++ W R +
Sbjct: 311 PQGKSFEIQIRTYEMHKTAEYGIAAHWKYKEGIVEGTDNKGVEIEKADFDTKLT-WVREM 369
Query: 545 LTWQCEAMS 553
L WQ E +
Sbjct: 370 LDWQKETTN 378
>gi|302387920|ref|YP_003823742.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium saccharolyticum WM1]
gi|302198548|gb|ADL06119.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium saccharolyticum WM1]
Length = 774
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 151/351 (43%), Positives = 230/351 (65%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA++ AE AH+ Q R SG+PY++H + A++LA + + +AAG+LHD ++D +S D
Sbjct: 63 KAYHIAEEAHKDQRRKSGEPYIIHPLCVAIILADLEMDKETIAAGILHDVVEDTIMSLDE 122
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL+Q+S + ++A+ L MFLAMA D R ++IKLA
Sbjct: 123 LKAEFGEEVALLVDGVTKLTQISW-----SMDKMEIQAENLRKMFLAMAKDIRVIIIKLA 177
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++ AKET+EI+ P+A+RLGIS K++L++L ++L P+ + EL
Sbjct: 178 DRLHNMRTLQYMKPEKQKEKAKETMEIYAPIAHRLGISKIKIELDDLSLRYLQPEIYYEL 237
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ K+ D E V S +++++ L+ I V GR K +SI+ KM+ + T+D+I
Sbjct: 238 AEKISLKKDARETFVKSIVDEVQDHLRSGGIEARV-DGRVKHFFSIYKKMVNQNKTLDQI 296
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 297 YDLFAVRIIVDSVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGNNGQP 356
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV-LQMVEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 357 FEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAAGKEEEKLSWLRQILEWQ 407
>gi|302872388|ref|YP_003841024.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
gi|302575247|gb|ADL43038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor obsidiansis
OB47]
Length = 722
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 227/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KAF A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 DLIKKAFEFAQKYHEGQARSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + I R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 82 SLEDIEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 132
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PL +RLGIS K +LE+L ++L+
Sbjct: 133 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLVHRLGISKIKWELEDLSLRYLD 192
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 193 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 252
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 253 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 312
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 313 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|418463632|ref|ZP_13034628.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
gi|359732115|gb|EHK81136.1| (p)ppGpp synthetase, RelA/SpoT family protein [Saccharomonospora
azurea SZMC 14600]
Length = 774
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 220/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 74 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQ 133
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 134 LTNEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 185
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 186 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 245
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L L + I+ V GR K YSIH KM+ + +D+I
Sbjct: 246 VRLVADRAPSRDTYLRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 304
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 305 HDLVGVRILVEEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 364
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 365 LEVQIRTHEMHRTAEYGIAAHWRYKETRGTHRGNAVDIDEMAWMRQLLDWQREA 418
>gi|434392415|ref|YP_007127362.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
gi|428264256|gb|AFZ30202.1| (p)ppGpp synthetase I, SpoT/RelA [Gloeocapsa sp. PCC 7428]
Length = 761
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/380 (43%), Positives = 230/380 (60%), Gaps = 14/380 (3%)
Query: 178 LETYAKEFLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 235
L + ++ L Q H+ +D + +AF A H+GQ R SG+PY+ H V A LL
Sbjct: 21 LPEWLQKCLVAPQESHQPSEQDNSLICRAFSFAYDLHQGQYRKSGEPYICHPVAVAGLLR 80
Query: 236 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 295
+G +S ++AAG LHD ++D +S + I + FG V LVEGV+KLS+ S+ +S
Sbjct: 81 DLGGSSAMIAAGFLHDVVEDTDVSIEDIEQRFGNEVRQLVEGVTKLSEFSQ-----KFSS 135
Query: 296 KT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 353
KT +A+ MFLAMA D R +++KLADRLHNM TL+ L K++R A ET EIF PLA
Sbjct: 136 KTERQAENFRRMFLAMAKDIRVIVVKLADRLHNMRTLEHLAPEKQRRIALETREIFAPLA 195
Query: 354 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNIS 411
NRLGI +K +LE+L FK+L P+ + ++ + E EA +T I+ L ++ I
Sbjct: 196 NRLGIGRFKWELEDLAFKYLEPEAYRQIQDLVAEKRVNREARLTRVIDVLTARMEQAEIK 255
Query: 412 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 471
+ + GR K LY I+ KM +++ EI+DI +R+IV +E+CY+AL VH + +PG
Sbjct: 256 CIDISGRPKHLYGIYQKMQRQQKEFHEIYDIAAIRIIVNTKEECYRALAEVHDAFKPIPG 315
Query: 472 KMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQH 530
+ KDYI PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKE G H
Sbjct: 316 RFKDYIGLPKPNRYQSLHTAVVGFTGRPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSSH 375
Query: 531 SSFVL--QMVEWARWVLTWQ 548
S + W R +L WQ
Sbjct: 376 SQLKTSEEKFTWLRQILEWQ 395
>gi|172039304|ref|YP_001805805.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Cyanothece sp.
ATCC 51142]
gi|354552428|ref|ZP_08971736.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
gi|171700758|gb|ACB53739.1| probable guanosine-3',5'-bis(diphosphate) 3'-diphosphatase,
(ppGpp)ase [Cyanothece sp. ATCC 51142]
gi|353555750|gb|EHC25138.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanothece sp. ATCC 51472]
Length = 744
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 165/370 (44%), Positives = 227/370 (61%), Gaps = 15/370 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYKLHEGQTRKSGEPYIAHPVAVAGILRDLGGDKAMIAAGFLHDVVEDTDV 96
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEEIEEMFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMARDIRVI 149
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 150 VVKLADRLHNMRTLEPLRPEKQKRIARETKEIFAPLANRLGIWRVKWELEDLSFKYLEPE 209
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ + + E E + + L++ L D I L L GR K LY I+ KM ++
Sbjct: 210 DYREIQNFVSEKRIDRETRIETVKNILQKRLDDMGIQVLELQGRPKHLYGIYFKMQRQNK 269
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRALAVVHDVFKPMPGRFKDYIGLPKPNRYQSLHTTVVG 329
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHW+YKE G H+ F + W R +L WQ +
Sbjct: 330 LNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGGSNHTHFSNEDEKFTWLRQLLDWQKD- 388
Query: 552 MSKDRSCVGN 561
+ D+ V N
Sbjct: 389 LKDDQEYVEN 398
>gi|225386906|ref|ZP_03756670.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
gi|225046918|gb|EEG57164.1| hypothetical protein CLOSTASPAR_00654 [Clostridium asparagiforme
DSM 15981]
Length = 762
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 152/352 (43%), Positives = 226/352 (64%), Gaps = 13/352 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AHR Q R SG+PY++H + A++LA + + + AGLLHD ++D +S D
Sbjct: 48 KAYRVAKEAHREQKRKSGEPYIIHPLCVAIILADLEMDKETIEAGLLHDVVEDTAMSLDE 107
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG V+ LV+GV+KL+QLS + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LAKQFGTEVSFLVDGVTKLTQLSW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K+L P+ + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKYLKPEVYYDL 222
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ D EA V +++++Q +KD I + GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVSLRKDAREAFVQEIVDEVKQHMKDAGIE-AAIGGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQP 341
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE G SS ++ W R +L WQ
Sbjct: 342 FEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAASSEEAKL-SWLRQILEWQ 392
>gi|381165523|ref|ZP_09874753.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
gi|379257428|gb|EHY91354.1| guanosine polyphosphate synthetase/pyrophosphohydrolase
[Saccharomonospora azurea NA-128]
Length = 781
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/354 (45%), Positives = 220/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHREQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSVEQ 140
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTNEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L L + I+ V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTNQLGESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 312 HDLVGVRILVEEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 371
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 372 LEVQIRTHEMHRTAEYGIAAHWRYKETRGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|384565591|ref|ZP_10012695.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
gi|384521445|gb|EIE98640.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora glauca
K62]
Length = 781
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTEDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L + L++ I+ V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTKQLEESRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G P
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRYGVYQSLHTTVIGPDGKP 371
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 372 LEVQIRTHEMHRTAEYGIAAHWRYKETKGTHRGNAVDIDEMAWMRQLLDWQREA 425
>gi|153941234|ref|YP_001392337.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|170754462|ref|YP_001782694.1| GTP pyrophosphokinase [Clostridium botulinum B1 str. Okra]
gi|384463312|ref|YP_005675907.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|429246540|ref|ZP_19209858.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
gi|152937130|gb|ABS42628.1| GTP pyrophosphokinase [Clostridium botulinum F str. Langeland]
gi|169119674|gb|ACA43510.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum B1 str.
Okra]
gi|295320329|gb|ADG00707.1| GTP pyrophosphokinase [Clostridium botulinum F str. 230613]
gi|428756456|gb|EKX79010.1| GTP pyrophosphokinase [Clostridium botulinum CFSAN001628]
Length = 723
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLAFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|312127055|ref|YP_003991929.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
hydrothermalis 108]
gi|311777074|gb|ADQ06560.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
hydrothermalis 108]
Length = 722
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 227/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ R SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 NLIKKAFDFAQKYHDGQARNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + + R FG +ADLV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 82 SLEDVEREFGKEIADLVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 132
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 133 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 192
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 193 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQ 252
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 253 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 312
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 313 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|284928658|ref|YP_003421180.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
gi|284809117|gb|ADB94822.1| (p)ppGpp synthetase, RelA/SpoT family [cyanobacterium UCYN-A]
Length = 745
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 249/444 (56%), Gaps = 29/444 (6%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D + AF A + H+GQ R SG+PY++H V A +L +G + +++AAG LHD ++D
Sbjct: 36 QDLICHAFDFAYQLHKGQYRKSGEPYIVHPVTVAGILRDLGGDKSMIAAGFLHDVVEDTD 95
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 315
++ D I FG V LVEGV+KLS+ N ++KT +A+ MFLAMA D R
Sbjct: 96 ITADNIEEMFGQEVRLLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRV 148
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TLDAL K++R A ET EIF PLANRLGI K +LE+L FK+L
Sbjct: 149 IVVKLADRLHNMRTLDALKPEKQKRIALETKEIFSPLANRLGIWRVKWELEDLSFKYLET 208
Query: 376 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + E+ + E EA + + L++ L I L L GR K LY I+ KM +
Sbjct: 209 NAYWEIQGLVAEKRIDREARIENVKNILQKRLNSIGIQVLELQGRSKHLYGIYYKMHSQN 268
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
EI+D+ LR+IV+N+E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 269 KGFHEIYDLAALRIIVQNKEECYRALAVVHDTFKPMPGRFKDYIGLPKPNRYQSLHTTVV 328
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
G PLE+QIRT EMH AE+G AAHW+YKE H + + Q E W R +L WQ +
Sbjct: 329 GFNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGVSHYTQLSQEDEKFTWLRQLLDWQKD 388
Query: 551 AMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTS 610
D++ DD + + P DG VI + +V
Sbjct: 389 LKDAQEYVDNLKDNL---------FDDDVYVFTP----DGD--VIALARGATTVDFAYRI 433
Query: 611 STVMDLLERAGRGSSRWSPYGFPL 634
T + + R + +WS +G PL
Sbjct: 434 HTEVGNHMKGARINGKWSVFGQPL 457
>gi|312792967|ref|YP_004025890.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180107|gb|ADQ40277.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 726
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 229/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ+R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 317 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|239827847|ref|YP_002950471.1| (p)ppGpp synthetase I SpoT/RelA [Geobacillus sp. WCH70]
gi|239808140|gb|ACS25205.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacillus sp. WCH70]
Length = 732
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 220/356 (61%), Gaps = 10/356 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D
Sbjct: 26 EFIKKAYEFANHAHRDQYRKSGEPYIIHPIQVAGILVDLKMDPATIAAGFLHDVVEDTEA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + R FG+ VA LV+GV+KL ++ ++E +A+ MFLAMA D R +L
Sbjct: 86 TKEDLEREFGSEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFLAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + I+++ + L + +I + GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKKKRAEREQYLEEVIQEVRERLNEVSIP-CEISGRPKHIYSIYRKMVMQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHW YKEG + + + W R +L WQ +A
Sbjct: 319 KGEPLEVQIRTFEMHQIAEFGIAAHWAYKEGKTIKPNSFEEKLSWFREILEWQNDA 374
>gi|148381010|ref|YP_001255551.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|153931540|ref|YP_001385381.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 19397]
gi|153936238|ref|YP_001388788.1| GTP pyrophosphokinase [Clostridium botulinum A str. Hall]
gi|226950488|ref|YP_002805579.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|387819316|ref|YP_005679663.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
gi|148290494|emb|CAL84622.1| GTP pyrophosphokinase [Clostridium botulinum A str. ATCC 3502]
gi|152927584|gb|ABS33084.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
ATCC 19397]
gi|152932152|gb|ABS37651.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A str.
Hall]
gi|226842731|gb|ACO85397.1| GTP pyrophosphokinase [Clostridium botulinum A2 str. Kyoto]
gi|322807360|emb|CBZ04934.1| GTP pyrophosphokinase [Clostridium botulinum H04402 065]
Length = 723
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|375100160|ref|ZP_09746423.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
gi|374660892|gb|EHR60770.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora cyanea
NA-134]
Length = 781
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/354 (45%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 81 RAYDVAEELHRDQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSVEQ 140
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 141 LTDEFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 192
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 193 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 252
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L + L++ IS V GR K YSIH KM+ + +D+I
Sbjct: 253 VRLVADRAPSRDTYLRWVIGELTRQLEESRISAKV-EGRPKHYYSIHQKMIVRGRDLDDI 311
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++V+ DCY A+ VVH LW +PG+ KDY+ +P++ YQSLHT V G P
Sbjct: 312 HDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYVAQPRYGVYQSLHTTVIGPDGKP 371
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H + + E W R +L WQ EA
Sbjct: 372 LEVQIRTHEMHRTAEYGIAAHWRYKETKGTHRGNAVDVDEMAWMRQLLDWQREA 425
>gi|16330670|ref|NP_441398.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|383322412|ref|YP_005383265.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383325581|ref|YP_005386434.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383491465|ref|YP_005409141.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384436732|ref|YP_005651456.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451814828|ref|YP_007451280.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|6647853|sp|P74007.1|SPOT_SYNY3 RecName: Full=Probable guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase; AltName: Full=Penta-phosphate
guanosine-3'-pyrophosphohydrolase; Short=(ppGpp)ase
gi|1653162|dbj|BAA18078.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|339273764|dbj|BAK50251.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|359271731|dbj|BAL29250.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359274901|dbj|BAL32419.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359278071|dbj|BAL35588.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407958589|dbj|BAM51829.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
gi|451780797|gb|AGF51766.1| (p)ppGpp 3'-pyrophosphohydrolase [Synechocystis sp. PCC 6803]
Length = 760
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 222/357 (62%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H Q R SG+PY+ H V A LL +G + ++AAG LHD ++D +S
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDIS 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG A LVEGV+KLS+ N +++ +A+ MFLAMA D R +++
Sbjct: 113 IEQIEALFGEETASLVEGVTKLSKF------NFSSTTEHQAENFRRMFLAMAKDIRVIVV 166
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLDAL K++R A+ET +IF PLANRLGI +K +LE+L FK+L PD +
Sbjct: 167 KLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSY 226
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ S +VE E+ + + + L L+D+ I L GR K LY I+ KM +
Sbjct: 227 RKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHFELQGRPKHLYGIYYKMTSQDKAF 286
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+DI LR+IVE++ +CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 287 EEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVLGLT 346
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLE+QIRT+EMH AE+G AAHW+YKE ++ + E W R +L WQ +
Sbjct: 347 SRPLEIQIRTEEMHHVAEYGIAAHWKYKESGGSENATLTSTDEKFTWLRQLLDWQSD 403
>gi|344996822|ref|YP_004799165.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor lactoaceticus
6A]
gi|343965041|gb|AEM74188.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
lactoaceticus 6A]
Length = 726
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 229/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ+R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKYHDGQVRSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 317 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|159029396|emb|CAO90772.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 789
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KAF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 72 DLICKAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 131
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 132 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 184
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 185 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 244
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 245 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 302
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 303 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 362
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 363 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 420
>gi|22298127|ref|NP_681374.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
gi|22294305|dbj|BAC08136.1| GTP pyrophosphokinase [Thermosynechococcus elongatus BP-1]
Length = 752
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 164/358 (45%), Positives = 226/358 (63%), Gaps = 14/358 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D V +AF A H+GQ RASG+PY+ H V A +L +G ++AAGLLHD ++D
Sbjct: 40 DDLVCRAFQFAYDLHQGQRRASGEPYIAHPVAVASILRDLGGGPALLAAGLLHDVIEDTA 99
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 315
++ + + FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R
Sbjct: 100 VTAEELAANFGAEVRQLVEGVTKLSKF-------NFSSKTERQAESFRRMFLAMAQDIRV 152
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TL+ LP +R+ A+ET ++F PLANRLGI K +LE+L FK+L P
Sbjct: 153 IVVKLADRLHNMRTLEYLPEDRRRAIAQETRDVFAPLANRLGIWRIKWELEDLAFKYLEP 212
Query: 376 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + + + E EA + AI+ L++ L +L + GR K LYSI+ KM++++
Sbjct: 213 EAYRRIQELVAEKRANREAQLQQAIQILQERLSGMGFGYLEISGRPKHLYSIYQKMMRQQ 272
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
EI+DI G+R++V +++CY+AL VVH + VPG+ KDYI+ PK N YQSLHTVV
Sbjct: 273 KEFHEIYDIAGIRILVATKDECYRALAVVHDCFLSVPGRFKDYISLPKPNQYQSLHTVVI 332
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD---CQHSSFVLQMVEWARWVLTWQ 548
G G PLEVQIRT MH +E+G AAHW+YKE Q S Q W R +L WQ
Sbjct: 333 GLGGRPLEVQIRTLAMHHVSEYGIAAHWKYKETGHSLPQQWSVQDQKFTWLRQLLDWQ 390
>gi|425443682|ref|ZP_18823753.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
gi|389730348|emb|CCI05359.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9443]
Length = 765
Score = 290 bits (743), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 162/379 (42%), Positives = 227/379 (59%), Gaps = 17/379 (4%)
Query: 178 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 237
L + +E L N + + D + +AF A + H GQ R SG+PY+ H + A LL +
Sbjct: 27 LPDWLQECLINYENDPQNPDSDLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDL 86
Query: 238 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 297
G + ++AAG LHD ++D ++ + I FG V +LVE V+KLS+ N +SKT
Sbjct: 87 GGDGAMIAAGFLHDVVEDTEVTPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKT 139
Query: 298 -VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 355
+A+ MFLAMA D R +++KLADRLHNM TL+ L ++QR A ET EIF PLANR
Sbjct: 140 ERQAENFRRMFLAMAQDIRVIVVKLADRLHNMQTLEHLTPQQQQRIALETREIFAPLANR 199
Query: 356 LGISTWKVQLENLCFKHLNPDQHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNIS 411
LGI +K +LE+LCFK+L PD + ++ S K ++ EA + + L + L++ I
Sbjct: 200 LGIGRFKWELEDLCFKYLEPDAYRQVQLLVSEKRID--REARIETVTNTLREKLQEIGIK 257
Query: 412 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 471
L L GR K LY I+ KM + ++I+DI +R+IVE +E+CY+ L +VH + +P
Sbjct: 258 VLDLQGRPKHLYGIYHKMHNQGKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPN 317
Query: 472 KMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS 531
+ KDYI PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKE +
Sbjct: 318 RFKDYIGLPKANRYQSLHTTVVGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQT 377
Query: 532 SFVL--QMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 378 TLTAADEKFAWLRNLLDWQ 396
>gi|168179553|ref|ZP_02614217.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
gi|182669850|gb|EDT81826.1| GTP pyrophosphokinase [Clostridium botulinum NCTC 2916]
Length = 723
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKE D ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKE-DVENSNNIDLKLTWLREMLDWQKET 366
>gi|168181749|ref|ZP_02616413.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|237796515|ref|YP_002864067.1| GTP pyrophosphokinase [Clostridium botulinum Ba4 str. 657]
gi|182675126|gb|EDT87087.1| GTP diphosphokinase [Clostridium botulinum Bf]
gi|229261873|gb|ACQ52906.1| RelA/SpoT family protein [Clostridium botulinum Ba4 str. 657]
Length = 723
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|291535022|emb|CBL08134.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
M50/1]
Length = 770
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 232/379 (61%), Gaps = 15/379 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 32 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 91
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 92 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 146
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 147 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 206
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 415
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 207 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 265
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 266 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 325
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE----GDCQHS 531
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G
Sbjct: 326 YIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTAEYGIAAHWKYKEASNNGGVSQP 385
Query: 532 SFVL--QMVEWARWVLTWQ 548
V + + W R +L WQ
Sbjct: 386 MTVTEEEKLSWLRQILEWQ 404
>gi|291539586|emb|CBL12697.1| (p)ppGpp synthetase, RelA/SpoT family [Roseburia intestinalis
XB6B4]
Length = 770
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 232/379 (61%), Gaps = 15/379 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 32 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 91
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 92 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 146
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 147 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 206
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 415
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 207 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 265
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 266 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 325
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE----GDCQHS 531
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G
Sbjct: 326 YIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTAEYGIAAHWKYKEASNNGGVSQP 385
Query: 532 SFVL--QMVEWARWVLTWQ 548
V + + W R +L WQ
Sbjct: 386 MTVTEEEKLSWLRQILEWQ 404
>gi|443659642|ref|ZP_21132391.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
gi|443332660|gb|ELS47256.1| relA/SpoT family protein [Microcystis aeruginosa DIANCHI905]
Length = 739
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KAF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 22 DLICKAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 82 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 134
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 135 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 194
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 195 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 252
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 253 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 312
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 313 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 370
>gi|269792823|ref|YP_003317727.1| (p)ppGpp synthetase I SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
gi|269100458|gb|ACZ19445.1| (p)ppGpp synthetase I, SpoT/RelA [Thermanaerovibrio acidaminovorans
DSM 6589]
Length = 756
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 160/352 (45%), Positives = 218/352 (61%), Gaps = 11/352 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A A AHR Q R SG+PY++H + A +LA +G + ++A LLHD L+D + +
Sbjct: 61 EALVFAANAHREQRRHSGEPYIVHSISVAAILADMGLDVETLSAALLHDVLEDTEVGKEE 120
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG GV +V+GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLA
Sbjct: 121 MLSRFGEGVLTMVDGVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLA 174
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL A K+ AKETLEI+ PLA+RLGI K +LE+LCFK L PD + E+
Sbjct: 175 DRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPDIYYEI 234
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + EA++ A++ L+ LK++ I L GR K YSI+ KM +K L++D++
Sbjct: 235 RRRVRKKLPEREAIIKQALDVLQGKLKEEGIEAY-LSGRPKHFYSIYEKMRRKNLSLDQL 293
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR+IV +CYQ L +VH +W +PG+ DYI PK N YQSLHT V G P
Sbjct: 294 YDLLALRVIVGTVAECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVLGPSGEP 353
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHW YKEG + + Q + W R VL Q E
Sbjct: 354 LEVQIRTWEMHWLAEYGVAAHWHYKEGK-RRVDQIDQKLSWIRQVLETQQEG 404
>gi|297616954|ref|YP_003702113.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
gi|297144791|gb|ADI01548.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophothermus lipocalidus DSM
12680]
Length = 724
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AH GQ R SG+PY+ H + A++LA + ++ + A LLHD ++D ++ +
Sbjct: 24 RAYAFAEKAHAGQTRISGEPYVCHPLAVAIILAELELDAATLIAALLHDVVEDTEVTLEE 83
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +L +++E +A+ L MFLAMA D R ++IKLA
Sbjct: 84 VKLQFGEEVALLVDGVTKLGKLEFMSKEE------AQAENLRKMFLAMAKDIRVLIIKLA 137
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL P K+ A+ETLEIFVPLA+RLGI +K +LE+L F +L PD + EL
Sbjct: 138 DRLHNMRTLVYQPERKQVEIAEETLEIFVPLAHRLGIFRFKWELEDLSFLYLEPDTYYEL 197
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ +L E V I ++ L+ I + GR K+LYSI+ KMLK+ +DEI
Sbjct: 198 ARRLKAKRKEREEYVHELIARIRAELQKIGIEADI-AGRPKNLYSIYTKMLKQGKDLDEI 256
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D +R++V+ DCY L ++H LW +PG+ KDYI PK N YQSLHT + G G P
Sbjct: 257 YDKIAIRVLVDTVRDCYGVLGIIHTLWKPLPGRFKDYIAMPKPNMYQSLHTTLIGRGGEP 316
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
EVQIRT EMH AE+G AAHWRYKEG + S ++ W R +L WQ E
Sbjct: 317 FEVQIRTWEMHRTAEYGIAAHWRYKEGKTKTSDLDEKLA-WLRQMLEWQQEV 367
>gi|170758445|ref|YP_001788379.1| GTP pyrophosphokinase [Clostridium botulinum A3 str. Loch Maree]
gi|169405434|gb|ACA53845.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum A3 str.
Loch Maree]
Length = 723
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKEG ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEG-VENSNNIDLKLTWLREMLDWQKET 366
>gi|451819384|ref|YP_007455585.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451785363|gb|AGF56331.1| GTP pyrophosphokinase RelA [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 737
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 225/364 (61%), Gaps = 21/364 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+Y AE AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 DMVKKAYYFAEDAHKEQKRQSGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTEF 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ + F + +L+EGV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SYEETVKLFNEEIGNLIEGVTKLTRLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPEKKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ EL + E + + +V KL+ A + +I GR K YSI+ KM+
Sbjct: 196 YYELVDSIAEKRVERETYIKDIVDDLYAKLQAAGIESDID-----GRPKHFYSIYKKMVN 250
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 251 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTT 310
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC-----QHSSFVLQMVEWARWVLT 546
V G E+QIRT EMH AE+G AAHW+YKEGD + F ++V W R +L
Sbjct: 311 VIGPQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDTSKGEDKQKDFEKKLV-WLRDMLE 369
Query: 547 WQCE 550
WQ E
Sbjct: 370 WQKE 373
>gi|429760116|ref|ZP_19292606.1| GTP diphosphokinase [Veillonella atypica KON]
gi|429178521|gb|EKY19799.1| GTP diphosphokinase [Veillonella atypica KON]
Length = 746
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 234/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKDMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|308801048|ref|XP_003075305.1| putative plastid (ISS) [Ostreococcus tauri]
gi|116061859|emb|CAL52577.1| putative plastid (ISS), partial [Ostreococcus tauri]
Length = 529
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 170/444 (38%), Positives = 248/444 (55%), Gaps = 28/444 (6%)
Query: 194 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 253
+IF E V AF A ++H G P+ CVETA+ LA +G ++ VA GLLHDTL
Sbjct: 69 EIFAEPTVRDAFDFAAKSHAG---PGLGPHFDRCVETAVTLAKLGMDTKTVAVGLLHDTL 125
Query: 254 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADA 313
D D + F + LV +S++ ++SKL R + + E + M LAM DA
Sbjct: 126 DVTSCEVDELRERFSDEIVSLVVDLSRVHRVSKLHRASGRRLEVEERAQFRAMLLAMTDA 185
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R V++KL RL M L + ++Q+FA+ETL I+ PLA RLGI K +LE+L FK +
Sbjct: 186 RVVIVKLTARLIKMRNLQSTSASQQQKFAEETLNIYAPLAARLGIFAVKNELEDLTFKWM 245
Query: 374 NPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
NP + E+S L + M+ SA+ KL++ L +N + LCGR KS+YS++ KM+ K
Sbjct: 246 NPAAYAEISQVLDQ---REMIVSALTKLDEGLASRNAQVVDLCGRQKSVYSVYKKMMDKG 302
Query: 434 LTMDEIHDIYG-------LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQ 486
+DEI D+ E+E C + L VH ++ V G++KDYI PK NGYQ
Sbjct: 303 HKLDEIMDLRAIRIIIADGDDDDESERTCREVLESVHSIFTPVKGRLKDYIANPKENGYQ 362
Query: 487 SLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS-FVLQMVEWARWVL 545
SLH+ V E E+QIR+ MH AE+G AAHWRYKE + +S V Q ++WAR++L
Sbjct: 363 SLHSCVRDEAGTTFEIQIRSASMHRTAEYGVAAHWRYKENEKSTTSPKVDQQIQWARFML 422
Query: 546 TWQCEAMSKDR-------SCVGNGDSIKPPCTFPSHADDCPFS----YKPQCSHD--GPV 592
+WQ E + + + V G S+ PC FP+HA DC F+ + C + P
Sbjct: 423 SWQNELDDQQKIRPLRTAAAVDCGASLM-PCMFPTHAHDCMFNTAEGFCQTCDAEDASPH 481
Query: 593 FVIMIENDKMSVQEFPTSSTVMDL 616
+VI++ + +S++E +T+ DL
Sbjct: 482 YVIVVVDGAVSIREVKPENTLADL 505
>gi|427412621|ref|ZP_18902813.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
gi|425716428|gb|EKU79412.1| RelA/SpoT family protein [Veillonella ratti ACS-216-V-Col6b]
Length = 744
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 165/392 (42%), Positives = 233/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
++D+ FN E + +L + +L A K +++AF A++AH Q RAS
Sbjct: 9 VIVDQPVFNKEVEL--AHLMEIVRSYLDEADCKE-------IMRAFEVADKAHAPQKRAS 59
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY+LH + A +LA + ++T V A LLHD ++D + I FG VA LV+GV+
Sbjct: 60 GEPYILHPLAVATILANLQIDATTVIAALLHDVVEDTEYTLPQIEELFGKEVAFLVDGVT 119
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 120 KLNQFQYHTKEDQ------QLENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 173
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAMVTS 396
+R A+ETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ E E +V
Sbjct: 174 KRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDLVEQMQEKRHVREEIVND 233
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+E+L++AL+D +I V GR K YSI+ KM K + +I+D+Y +R+IV+ DCY
Sbjct: 234 TMEQLKKALEDAHIKADV-KGRPKHFYSIYKKMKKDNRDLSQIYDLYAVRVIVDTIPDCY 292
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L +VH LW +P + KDYI PK N YQSLHT + G +E+QIRT EMH +E+G
Sbjct: 293 AVLGIVHNLWKPLPYRFKDYIAMPKSNMYQSLHTTIIGTMGHSVEIQIRTWEMHRVSEYG 352
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 353 VAAHWRYKEGNKGGDKDFDQKVGWLRQVLEWQ 384
>gi|422301714|ref|ZP_16389079.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
gi|389789226|emb|CCI14734.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9806]
Length = 765
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLTSQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ ++ S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRQVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|240143890|ref|ZP_04742491.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
gi|257204082|gb|EEV02367.1| GTP diphosphokinase [Roseburia intestinalis L1-82]
Length = 774
Score = 290 bits (741), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 232/379 (61%), Gaps = 15/379 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA +
Sbjct: 36 EKLYDELIASVRKYHPSTDISLIEKAYHVARDAHEGQARKSGEPYIIHPLCVAIILAELE 95
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AGLLHD ++D ++ + I + FG VA LV+GV+KL QLS + V
Sbjct: 96 LDKETIVAGLLHDVVEDTVMTDEQIAQEFGDEVALLVDGVTKLGQLS-----YDADKVEV 150
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 151 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 210
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 415
IS K++L++L K+L PD + +L ++ + + V +E++ Q +KD I V
Sbjct: 211 ISKIKIELDDLSLKYLEPDAYYDLVHQIAQRKSVRDEYVQKLVEEVRQHIKDAGIPAQV- 269
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 270 DGRAKHFFSIYKKMVNQHKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 329
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE----GDCQHS 531
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G
Sbjct: 330 YIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTFEMHRTAEYGIAAHWKYKEASNNGGVSQP 389
Query: 532 SFVL--QMVEWARWVLTWQ 548
V + + W R +L WQ
Sbjct: 390 MTVTEEEKLSWLRQILEWQ 408
>gi|254527119|ref|ZP_05139171.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
gi|221538543|gb|EEE40996.1| RelA/SpoT family protein [Prochlorococcus marinus str. MIT 9202]
Length = 769
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/363 (44%), Positives = 224/363 (61%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ + KAF A +AH GQ RASG+PY++H V A LL IGA+S+V+AAGLLHD ++D
Sbjct: 60 QNLIAKAFKLAYKAHDGQFRASGEPYIIHPVAVANLLKEIGASSSVIAAGLLHDVVEDTG 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG V LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 120 IDLCEIETNFGLEVKILVEGVTKLGGI----HFNNRTE--AQAENLRKMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T++ L K+ R A+ET EI+ PLANRLGI+ +K +LE+L FK L P
Sbjct: 174 LVKLADRLHNMRTIEWLNDEKKLRIARETREIYAPLANRLGINRFKWELEDLAFKFLEPK 233
Query: 377 QHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L ++ V+ D E + + +++ L + + GR K LY I KM +++
Sbjct: 234 EYLDLKDQIAVKRSDREKRLKLTLNLMKENLISAGLKNFEITGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV++ + CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 HFHEIYDVAALRIIVDDSDSCYRALAVVHDTFKPIPGRFKDYIGLPKPNGYQSLHTSVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT MH AE+G AAHW+YKEG S + W R ++ WQ E +
Sbjct: 354 RHR-PIEVQIRTTSMHQIAEYGIAAHWQYKEGGSPAKSNA-ERFNWLRQLVEWQQEGNER 411
Query: 555 DRS 557
D +
Sbjct: 412 DHN 414
>gi|433655146|ref|YP_007298854.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293335|gb|AGB19157.1| (p)ppGpp synthetase, RelA/SpoT family [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 718
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A +AH GQ R SG+PY++H VE AM+L + + + +A+GLLHD ++D +
Sbjct: 20 NLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYDDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD
Sbjct: 134 IKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDD 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + E + I+KL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT +MH AE+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWDMHRTAEYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|78213963|ref|YP_382742.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
gi|78198422|gb|ABB36187.1| metal dependent phosphohydrolase [Synechococcus sp. CC9605]
Length = 758
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 165/362 (45%), Positives = 217/362 (59%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 47 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 106
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D I FG+ V +LVEGV+KL + R +A+ L MFLAMA D R V
Sbjct: 107 VTPDQIELHFGSEVRELVEGVTKLGGIHFNDR------TEAQAENLRRMFLAMASDIRVV 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 161 LVKLADRLHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 220
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + L + L+ + + GR K L+ I KM +++
Sbjct: 221 AFREIQEEVATKRSEREQRLGVTVGLLNERLERAGLDHCEVSGRPKHLFGIWSKMQRQQK 280
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 281 EFHEIYDVAALRILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 340
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AEFG AAHW+YKEG SS + W R ++ WQ E +
Sbjct: 341 RHR-PIEVQIRTLEMHHVAEFGIAAHWKYKEGGSPASSSSDAERFNWLRQLVDWQQEGGN 399
Query: 554 KD 555
D
Sbjct: 400 DD 401
>gi|375096049|ref|ZP_09742314.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
gi|374656782|gb|EHR51615.1| (p)ppGpp synthetase, RelA/SpoT family [Saccharomonospora marina
XMU15]
Length = 783
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 161/357 (45%), Positives = 223/357 (62%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 80 RAYDVAEELHRHQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYSLER 139
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL TA+ EA+ + M +AMA D R ++IKLA
Sbjct: 140 LGSDFGEKVAQLVDGVTKLDKV-KL----GTAA---EAETIRKMVIAMARDPRVLVIKLA 191
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 192 DRLHNMRTMRFLPPEKQARKAKETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 251
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L + L+ I+ V GR K YSIH KM+ + +D+I
Sbjct: 252 VRLVADRAPSRDTYLRWVIGELTKQLESSRINAKV-EGRPKHYYSIHQKMIVRGRDLDDI 310
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 311 HDLVGVRILVEDVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 370
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH-----SSFVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHWRYKE H ++ + + W R +L WQ EA
Sbjct: 371 LEVQIRTHEMHRTAEYGIAAHWRYKESRGTHGHNPANAVDIDEMAWMRQLLDWQREA 427
>gi|304316999|ref|YP_003852144.1| (p)ppGpp synthetase I SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778501|gb|ADL69060.1| (p)ppGpp synthetase I, SpoT/RelA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 718
Score = 290 bits (741), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A +AH GQ R SG+PY++H VE AM+L + + + +A+GLLHD ++D +
Sbjct: 20 NLIFKAYDYALKAHEGQYRNSGEPYIVHPVEVAMILTNLELDVSTIASGLLHDVIEDTSI 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD I FG +ADLV+GV+KL + ++ +A+ + M +AMA D R ++
Sbjct: 80 TYDDIKNEFGQEIADLVDGVTKLGMIEYKSKVEQ------QAENMRKMLIAMAKDIRVIM 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K++ A+ETLEI+ P+A+RLG+S K +LE+L ++L+PD
Sbjct: 134 IKLADRLHNMRTLKYLSEEKQKEKAQETLEIYAPIAHRLGMSMIKWELEDLSLRYLHPDD 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + E + I+KL++ L + I V GR K YSI+ KM ++ T
Sbjct: 194 YYSLVEKVAKKRKEREESIKELIDKLKEKLNEIGIKAEV-DGRPKHFYSIYKKMKQQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY L VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FEQIYDLMAVRVIVNTVKDCYGTLGAVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT +MH AE+G AAHW+YKEG F ++ W R +L WQ E
Sbjct: 313 KGEPFEIQIRTWDMHRTAEYGIAAHWKYKEGKSYEDEFDAKL-SWLRQLLEWQRE 366
>gi|33239669|ref|NP_874611.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus subsp. marinus str. CCMP1375]
gi|33237194|gb|AAP99263.1| GTP pyrophosphokinase [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 776
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 164/357 (45%), Positives = 216/357 (60%), Gaps = 11/357 (3%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
AF A R H+GQ R SGDPY+ H + A LL IGA+ TV+AAG LHD ++D ++ +
Sbjct: 72 AFDLAFRLHKGQFRVSGDPYISHPIAVADLLRDIGASPTVIAAGFLHDVVEDTSITLPEL 131
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG+ V LVEGV+KL + + T +A+ L MFLAMA D R VL+KLAD
Sbjct: 132 EAYFGSEVRGLVEGVTKLGGI------HFTNRTEAQAENLRKMFLAMARDIRVVLVKLAD 185
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T++ L K+QR A ET EI+ PLANRLGI +K +LE+L FK L P+ + ++
Sbjct: 186 RLHNMRTIEVLQPAKQQRIALETREIYAPLANRLGIGRFKWELEDLAFKLLEPESYKKIQ 245
Query: 383 SKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
++ E + IE L+ L + ++ + GR K L+ I KM K+ EI+
Sbjct: 246 QEVATKRSEREKRLHLTIELLKNRLINAGLNDCNIDGRPKHLFGIWSKMEKQDKEFHEIY 305
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ LR+IV N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+
Sbjct: 306 DVAALRIIVPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PI 364
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 557
EVQIRT+EMH AEFG AAHW+YKEG S + W R ++ WQ E S D +
Sbjct: 365 EVQIRTQEMHQVAEFGIAAHWKYKEGGSPASGNT-ERFNWLRQLVDWQQEEGSSDHN 420
>gi|331002004|ref|ZP_08325524.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330411800|gb|EGG91205.1| hypothetical protein HMPREF0491_00386 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 762
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/356 (43%), Positives = 228/356 (64%), Gaps = 15/356 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ AH Q R SG+PY++H + A++LA + + +AAGLLHD ++D +S
Sbjct: 48 MITKAYELAKTAHNDQRRKSGEPYIIHPICVAIILAELELDKETIAAGLLHDVIEDTAIS 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
++ + FG VA+LV+GV+KL+QLS +N+ ++A+ L MFLAMA D R +LI
Sbjct: 108 FEELSDMFGVDVANLVDGVTKLTQLS---LKNDKIE--MQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A RLGIS KV+L++L K+L+PD +
Sbjct: 163 KLADRLHNMRTLQYMKPEKQKEKARETMDIYSPIAQRLGISKIKVELDDLSLKYLHPDVY 222
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS KL + + V I+K+ + L I + + GR K L+SI+ KM+ + T+
Sbjct: 223 YDLSEKLAFRKEQRQQFVDEIIKKINEHLSVTGIKYQI-NGRVKHLFSIYKKMVNQNKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ CY AL VH+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 282 DQIYDVFAIRIIVEDVAACYLALGTVHEIYKPIPGRFKDYIAMPKQNMYQSLHTTLISDT 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE----GDCQHSSFVLQMVEWARWVLTWQ 548
P EVQIRT EMH AEFG AAHW+YKE + Q S + W R +L WQ
Sbjct: 342 GQPFEVQIRTYEMHKTAEFGIAAHWKYKETGSSSEAQGSEDA--KMNWLRQILEWQ 395
>gi|113953676|ref|YP_731890.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
gi|113881027|gb|ABI45985.1| RelA/SpoT family protein [Synechococcus sp. CC9311]
Length = 778
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 163/349 (46%), Positives = 213/349 (61%), Gaps = 14/349 (4%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ D I FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPDQIESHFGPEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM T+
Sbjct: 140 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTI 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD----QHTELSSKLV 386
AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+S+K
Sbjct: 194 GALKEEKQQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVSTKRS 253
Query: 387 ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E D VT ++ L L + + GR K LY I KM +++ EI+D+ LR
Sbjct: 254 EREDRLSVT--VQLLCDRLAAVGLDSCEVSGRPKHLYGIWTKMQRQQKEFHEIYDVAALR 311
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
++ N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT
Sbjct: 312 ILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRT 370
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+MH +EFG AAHW+YKEG + + W R ++ WQ E + D
Sbjct: 371 WDMHQVSEFGIAAHWKYKEGGSPATGGDTERFNWLRQLVDWQQEGAADD 419
>gi|421836333|ref|ZP_16270846.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
gi|409741806|gb|EKN41461.1| GTP pyrophosphokinase, partial [Clostridium botulinum CFSAN001627]
Length = 465
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 224/365 (61%), Gaps = 11/365 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + I L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIISNLQQNLKRSGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
G P E+QIRT EMH AE+G AAHW+YKE D ++S+ + + W R +L WQ E +
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKE-DVENSNNIDLKLTWLREMLDWQKETTDPE 370
Query: 556 RSCVG 560
G
Sbjct: 371 EFMQG 375
>gi|381210458|ref|ZP_09917529.1| GTP pyrophosphokinase [Lentibacillus sp. Grbi]
Length = 733
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 221/357 (61%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ AE AH+ Q R SG+PY++H V+ A +L + + +A G LHD ++D ++
Sbjct: 27 FLHRAYEFAEDAHKDQFRKSGEPYIVHPVQVAGILVDLEMDPVTIAGGFLHDVVEDTEVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + +F VA LV+GV+KL ++ ++E ++A+ MF+AMA D R +LI
Sbjct: 87 LEQLEDSFNEEVAMLVDGVTKLGKIKYKSKE------ALQAENHRKMFVAMARDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPPNKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + +E + I++LE+ L D NI + GR K LYSI+ KM K+
Sbjct: 201 YRIVQLMKQKREERETYIDEVIDELEKQLDDVNIEADI-SGRPKHLYSIYRKMAKQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVHSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AE+G AAHW YKEG + S + W R +L WQ E
Sbjct: 320 GDPLEVQIRTKEMHEIAEYGIAAHWAYKEGKQLAKGSKSFEDRLTWFREILDWQSET 376
>gi|425470826|ref|ZP_18849686.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
gi|389883416|emb|CCI36194.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9701]
Length = 765
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 218/358 (60%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|365840434|ref|ZP_09381623.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
gi|364561473|gb|EHM39373.1| GTP diphosphokinase [Anaeroglobus geminatus F0357]
Length = 734
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 157/351 (44%), Positives = 222/351 (63%), Gaps = 13/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH+ Q R SG+PY+LH + A +LA + ++T + A L+HD ++D + +
Sbjct: 31 KAYELANDAHKEQKRVSGEPYILHPLAVAQILADMEIDTTTITASLMHDVVEDTTYTLED 90
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 91 MERLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QVNSMRKMFLAMAKDVRVVVIKLA 144
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++R A+ETLEI+ PLA+RLGI K +LE+L F+++ PD++ +L
Sbjct: 145 DRLHNMRTLKFMRSEKQKRIAQETLEIYAPLAHRLGIFNIKWELEDLSFRYMEPDKYYDL 204
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E E +V AI+ L++ L + ISF + GR K YSI+ KM K + +I
Sbjct: 205 VDQMKEKRQVREEIVNEAIDVLKETLSESGISFEI-NGRPKHFYSIYKKMKKDNRDLSQI 263
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV +DCY L +VH LW +P + KDYI PK N YQSLHT V G P
Sbjct: 264 YDLYAIRVIVNTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP 323
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 548
+E+QIRT EMH AE+G AAHWRYKEG + S F +M W R +L WQ
Sbjct: 324 VEIQIRTWEMHHIAEYGVAAHWRYKEGHAAGRTSEFDEKM-GWLRNLLEWQ 373
>gi|320449341|ref|YP_004201437.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
gi|320149510|gb|ADW20888.1| GTP pyrophosphokinase [Thermus scotoductus SA-01]
Length = 667
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 159/371 (42%), Positives = 232/371 (62%), Gaps = 25/371 (6%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE AHRGQ+R SG+PY+ H V A +LA++ ++ V AGLLHDTL+D ++
Sbjct: 26 VREAYRFAEEAHRGQLRKSGEPYITHPVAVAEILASLRMDADTVMAGLLHDTLEDCGVAP 85
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V LVEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 86 EELERRFGPAVRRLVEGETKVSKLYKLA---NLEGEEKRAEDLRQMFIAMAEDVRIIIVK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ +
Sbjct: 143 LADRLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAYH 202
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKK 432
L S++ E + E ++ A+ LE+AL+ + L + GR K LYSI KM ++
Sbjct: 203 ALLSRIQETQEAREQIIRKAMVALEEALRRDELLQAQLQGLEVTGRPKHLYSIWKKMERE 262
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 263 GKALEQIYDLLAVRVILDPKPAPTEEGRALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 322
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE 539
PK NGYQSLHT V +PLEVQIRT+EMH AE+G AAHW YKEG + V
Sbjct: 323 PKPNGYQSLHTTVIALEGLPLEVQIRTREMHRIAEYGIAAHWLYKEGLTDPEELK-RRVS 381
Query: 540 WARWVLTWQCE 550
W + + WQ E
Sbjct: 382 WLKSIQEWQQE 392
>gi|168208638|ref|ZP_02634263.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
gi|170712986|gb|EDT25168.1| GTP pyrophosphokinase [Clostridium perfringens B str. ATCC 3626]
Length = 726
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|429766249|ref|ZP_19298523.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
gi|429185229|gb|EKY26218.1| GTP diphosphokinase [Clostridium celatum DSM 1785]
Length = 727
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/362 (41%), Positives = 228/362 (62%), Gaps = 22/362 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A AH+ Q R SG+PY++H +E A +LA +G +++ + AGLLHD ++D
Sbjct: 19 NIVKKAYNLAFEAHKEQKRESGEPYIIHPIEVATILAELGMDTSTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F +A+LV GV+K++++ ++E +AD M LAMA D R ++
Sbjct: 79 TYEDIKNIFSEEIANLVSGVTKITKMEYKSKEEQ------QADNFRKMLLAMANDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ AKETL+I+ PLA+RLGIS K +LE+LCF++L+ ++
Sbjct: 133 IKLADRLHNMRTLKYMSKEKQKKTAKETLDIYAPLAHRLGISKVKWELEDLCFRYLHEEE 192
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L ++ E + + EKL++A D +I GR K YSI+ KM+
Sbjct: 193 YYDLVKQIAEKRVERETYIAKTIKDLYEKLDEAGIDSDID-----GRPKHFYSIYRKMVT 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY+ L VVH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYEVLGVVHTIYKPIPGRFKDYIAMPKPNMYQSLHTT 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC---QHSSFVLQMVEWARWVLTWQ 548
V G E+QIRT EMH AE+G AAHW+YKEGD + SF ++V W R +L WQ
Sbjct: 308 VIGPQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDSGDNKEKSFENKLV-WLRDMLEWQ 366
Query: 549 CE 550
E
Sbjct: 367 KE 368
>gi|305681298|ref|ZP_07404105.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
gi|305659503|gb|EFM49003.1| GTP diphosphokinase [Corynebacterium matruchotii ATCC 14266]
Length = 763
Score = 289 bits (740), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 240/400 (60%), Gaps = 22/400 (5%)
Query: 158 SAALIDELTFN-MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQM 216
SA L LT N ++ N V L + +EF A + + + +A+ AER H G
Sbjct: 21 SARLARSLTGNRVKVNPVLEPLLSIHREFHPKADV-------ELLSRAYDTAERLHEGVF 73
Query: 217 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 276
R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + FG VA LV+
Sbjct: 74 RKSGDPYITHPLAVATIAAEIGMDTTTIIASLLHDTVEDTEYSLDDLTNDFGEEVARLVD 133
Query: 277 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 335
GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 134 GVTKLDKVALGA--------AAEAETIRKMVMAMAQDPRVLVIKVADRLHNMRTMRFLPP 185
Query: 336 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 393
K+ + A++TL++ PLA+RLG+S+ K +LE+L F L P ++ E+ + + +
Sbjct: 186 EKQAKKARQTLDVIAPLAHRLGMSSVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDRY 245
Query: 394 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 453
+ I L+Q LK+ NI V GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 246 LQEIISILQQGLKENNIDAEV-KGRPKHYWSIYQKMVMRGKDFDEIFDLVGIRILVDNLN 304
Query: 454 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 513
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH+ A
Sbjct: 305 NCYAAIGVVHSLFAAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHVNA 364
Query: 514 EFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 551
E+G AAHWRYKE HS + + W R +L WQ EA
Sbjct: 365 EYGIAAHWRYKETKGSHSGEQAEIDQMAWMRQLLDWQKEA 404
>gi|354565208|ref|ZP_08984383.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
gi|353549167|gb|EHC18609.1| (p)ppGpp synthetase I, SpoT/RelA [Fischerella sp. JSC-11]
Length = 758
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/363 (44%), Positives = 222/363 (61%), Gaps = 13/363 (3%)
Query: 194 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 253
K + + +AF A + H+GQ R SG+PY+ H + A +L +G ++ ++AAG LHD +
Sbjct: 38 KYYDTSLICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVV 97
Query: 254 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA- 311
+D ++ + I + FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA
Sbjct: 98 EDTDVTIEEIEQRFGSEVRCLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQ 150
Query: 312 DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFK 371
D R +++KLADRLHNM TL+ +P KR+R A ET EIF PLANRLGI +K +LE+L FK
Sbjct: 151 DIRVIVVKLADRLHNMRTLEYMPEEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFK 210
Query: 372 HLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 429
+L P+ ++ + E E + E L L + I L + GR K LYSI+ KM
Sbjct: 211 YLEPEAFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKM 270
Query: 430 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH 489
++ EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N YQSLH
Sbjct: 271 QRQNKEFHEIYDLAALRIIVQTNEECYRALAVVHDVFRPIPGRFKDYIGLPKPNRYQSLH 330
Query: 490 TVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTW 547
T V G PLEVQIRT EMH AE+G AAHW+YKE H+ + W R +L W
Sbjct: 331 TGVIGPWGRPLEVQIRTMEMHHVAEYGIAAHWKYKETGGSHTGLTASDEKFTWLRQLLEW 390
Query: 548 QCE 550
Q +
Sbjct: 391 QSD 393
>gi|303229459|ref|ZP_07316249.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
gi|302515995|gb|EFL57947.1| GTP diphosphokinase [Veillonella atypica ACS-134-V-Col7a]
Length = 746
Score = 289 bits (740), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 234/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A LLHD ++D + + I + FGA VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGAEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|110798612|ref|YP_696617.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
gi|110673259|gb|ABG82246.1| GTP pyrophosphokinase [Clostridium perfringens ATCC 13124]
Length = 726
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|182624408|ref|ZP_02952192.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
gi|177910411|gb|EDT72788.1| GTP pyrophosphokinase [Clostridium perfringens D str. JGS1721]
Length = 726
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|425452480|ref|ZP_18832297.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
gi|389765685|emb|CCI08474.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 7941]
Length = 765
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|440755832|ref|ZP_20935033.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
gi|440173054|gb|ELP52512.1| relA/SpoT family protein [Microcystis aeruginosa TAIHU98]
Length = 765
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|168214142|ref|ZP_02639767.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|168215563|ref|ZP_02641188.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
gi|170714350|gb|EDT26532.1| GTP pyrophosphokinase [Clostridium perfringens CPE str. F4969]
gi|182382330|gb|EDT79809.1| GTP pyrophosphokinase [Clostridium perfringens NCTC 8239]
Length = 726
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|425460758|ref|ZP_18840239.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
gi|389826500|emb|CCI22900.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9808]
Length = 765
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 219/358 (61%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ E+ + + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--RESRIETVVNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L VVH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAVVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|433444159|ref|ZP_20409169.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
gi|432001807|gb|ELK22676.1| GTP pyrophosphokinase [Anoxybacillus flavithermus TNO-09.006]
Length = 732
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 218/354 (61%), Gaps = 10/354 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ A+ AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FG VA LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ L++ I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEMRARLQEVGIQAEI-SGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVVGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AEFG AAHW YKEG + + + W R ++ WQ E
Sbjct: 320 GEPLEVQIRTFEMHHIAEFGIAAHWAYKEGKTIRPNTFEEKLAWFREIVEWQNE 373
>gi|168204879|ref|ZP_02630884.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|422346604|ref|ZP_16427518.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|422874854|ref|ZP_16921339.1| GTP pyrophosphokinase [Clostridium perfringens F262]
gi|170663656|gb|EDT16339.1| GTP pyrophosphokinase [Clostridium perfringens E str. JGS1987]
gi|373226149|gb|EHP48476.1| RelA/SpoT family protein [Clostridium perfringens WAL-14572]
gi|380304188|gb|EIA16478.1| GTP pyrophosphokinase [Clostridium perfringens F262]
Length = 726
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 228/361 (63%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY++H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYIIHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ IE+L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIEELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGVTGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|358066224|ref|ZP_09152755.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
gi|356695553|gb|EHI57181.1| hypothetical protein HMPREF9473_04818 [Clostridium hathewayi
WAL-18680]
Length = 762
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 153/356 (42%), Positives = 232/356 (65%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 48 MVEKAYRIAYDAHKEQKRKSGEPYIIHPLCVAIILADLELDKESIVAGILHDVVEDTVMT 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + + FG+ VA LV+GV+KL+QLS + + ++A+ L MFLAMA D R +LI
Sbjct: 108 LDEVAKEFGSEVALLVDGVTKLTQLSW-----SMDKQEIQAENLRKMFLAMAKDIRVILI 162
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A+RLGIS K++L++L K+L PD +
Sbjct: 163 KLADRLHNMRTLQYMTPEKQKEKARETMDIYSPIAHRLGISKIKIELDDLSLKYLEPDVY 222
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L+ K+ D EA V +E+++ + + I V GR K +SI+ KM+ + T+
Sbjct: 223 YDLAEKISLRKDAREAFVQGIVEEVKSHMVEAGIDARV-EGRVKHFFSIYKKMVNQDKTL 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE+ +DCY AL V+H+L+ +PG+ KDYI PK N YQSLHT + G
Sbjct: 282 DQIYDLFAVRIIVESVKDCYAALGVIHELYKPIPGRFKDYIAMPKPNMYQSLHTTLIGSN 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQCE 550
P E+QIRT EMH AEFG AAHW+YKE G Q ++ + + W R +L WQ +
Sbjct: 342 GQPFEIQIRTFEMHRTAEFGIAAHWKYKESGSGQIAAGSEEAKLSWLRQILEWQTD 397
>gi|81300186|ref|YP_400394.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
gi|81169067|gb|ABB57407.1| metal dependent phosphohydrolase [Synechococcus elongatus PCC 7942]
Length = 779
Score = 289 bits (739), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 216/355 (60%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++
Sbjct: 59 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVT 118
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +L
Sbjct: 119 PEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVIL 171
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q
Sbjct: 172 VKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQ 231
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + E EA + +++ L L I + + GR K LYSI+ KM ++
Sbjct: 232 YRSIQGHVAEKRADREARLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKE 291
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI D+ LR+IV + ++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 292 FHEIFDVAALRIIVNSNDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVIGL 351
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW+YKE F + W R +L WQ
Sbjct: 352 SGRPLEIQIRTLEMHRIAEYGIAAHWKYKESGGSAGKFSTEDEKFTWLRQLLEWQ 406
>gi|326201899|ref|ZP_08191769.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
gi|325987694|gb|EGD48520.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium papyrosolvens DSM
2782]
Length = 726
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 219/349 (62%), Gaps = 10/349 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ ++ AH GQ R SG+PY++H VE A++LA I + T + A LLHDT++D +YD
Sbjct: 26 KAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEIELDCTALVAALLHDTIEDTTCTYDQ 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL+ + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLNYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ EA +T I+ L + + I + GR K YSI+ KM+K+ T+D+I
Sbjct: 200 VEKINTKRKQREAYITIIIDTLREKTNELRIENAQIDGRPKHFYSIYRKMVKQNKTLDQI 259
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ R+IV + +DCY L +VH+L+ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTLIGPEGQP 319
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
EVQIRT +MH AE G AAHW+YKEG ++ W R +L WQ
Sbjct: 320 FEVQIRTWDMHRVAEVGIAAHWKYKEG-INNAKDSDNKFAWLRQLLEWQ 367
>gi|428221859|ref|YP_007106029.1| RelA/SpoT family (p)ppGpp synthetase [Synechococcus sp. PCC 7502]
gi|427995199|gb|AFY73894.1| (p)ppGpp synthetase, RelA/SpoT family [Synechococcus sp. PCC 7502]
Length = 752
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 157/339 (46%), Positives = 215/339 (63%), Gaps = 11/339 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
ED V +AF A + H+GQ RASG+PY+LH ++ A LL +G S ++AAG LHD ++D
Sbjct: 45 EDIVCQAFKLAYKLHQGQTRASGEPYILHPIQVANLLRDLGGGSAMIAAGFLHDVVEDTS 104
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARA 315
++ I FGA V LVEGV+KLS++ N SKT +A+ MFL MA D R
Sbjct: 105 VTLAEIEAQFGAEVRQLVEGVTKLSKI-------NFNSKTERQAENFRRMFLYMAEDIRV 157
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TL+ L K+ A+ET +IF PLANRLGI +K +LE+L FK+L
Sbjct: 158 IVVKLADRLHNMRTLEHLAPHKQVLIARETRDIFAPLANRLGIGQFKWELEDLAFKYLEA 217
Query: 376 DQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+Q+ E+ + + E EA +T A+E L ++ I+ + GR K LY I+ KM +++
Sbjct: 218 EQYREMKALVAETRSDREARITEAVEILRSRIQKIGITGFEVTGRPKHLYGIYEKMHRQQ 277
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
EI+DI +R+IV N ++CY+ L + H + VPG+ KDYI PK NGYQSLHT V
Sbjct: 278 KPYGEIYDIAAVRVIVNNTDECYRILAIAHDCFRPVPGRFKDYIALPKPNGYQSLHTAVI 337
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
PLEVQIRT EMH AE+G AAHW+YKE + +S
Sbjct: 338 SPDGQPLEVQIRTWEMHHVAEYGIAAHWKYKESNSNPNS 376
>gi|225593179|gb|ACN96096.1| (p)ppGpp synthetase I [Fischerella sp. MV11]
Length = 758
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/363 (44%), Positives = 222/363 (61%), Gaps = 13/363 (3%)
Query: 194 KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL 253
K + + +AF A + H+GQ R SG+PY+ H + A +L +G ++ ++AAG LHD +
Sbjct: 37 KYYDTSLICRAFEFAYQLHQGQYRKSGEPYICHPIAVAGMLRDLGGSAAMIAAGFLHDVV 96
Query: 254 DDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA- 311
+D ++ + I + FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA
Sbjct: 97 EDTDVTIEEIEQRFGSEVRCLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQ 149
Query: 312 DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFK 371
D R +++KLADRLHNM TL+ +P KR+R A ET EIF PLANRLGI +K +LE+L FK
Sbjct: 150 DIRVIVVKLADRLHNMRTLEYMPDEKRRRTATETREIFAPLANRLGIWRFKWELEDLAFK 209
Query: 372 HLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKM 429
+L P+ ++ + E E + E L L + I L + GR K LYSI+ KM
Sbjct: 210 YLEPEAFRQIQQLVSEKRTDREERLKKISETLRTRLAEAGIRCLDISGRPKHLYSIYQKM 269
Query: 430 LKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH 489
++ EI+D+ LR+IV+ E+CY+AL VVH ++ +PG+ KDYI PK N YQSLH
Sbjct: 270 QRQNKEFHEIYDLAALRIIVQTNEECYRALAVVHDVFRPIPGRFKDYIGLPKPNRYQSLH 329
Query: 490 TVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTW 547
T V G PLEVQIRT EMH AE+G AAHW+YKE H+ + W R +L W
Sbjct: 330 TGVIGPWGRPLEVQIRTMEMHHVAEYGIAAHWKYKETGGSHTGLTASDEKFTWLRQLLEW 389
Query: 548 QCE 550
Q +
Sbjct: 390 QSD 392
>gi|78185706|ref|YP_378140.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
gi|78170000|gb|ABB27097.1| metal dependent phosphohydrolase [Synechococcus sp. CC9902]
Length = 776
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 217/362 (59%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+S D I FG+ V +LVEGV+KL + R +A+ L MF+AMA D R V
Sbjct: 126 VSLDEIQEHFGSEVRELVEGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADR+HNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRVHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + L + L+ + + GR K LY I KM +++
Sbjct: 240 AFREIQQEVATKRSEREQRLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+I + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 AFHEIYDVAALRIITPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AEFG AAHW+YKEG S S + W R ++ WQ + +
Sbjct: 360 RHR-PIEVQIRTLEMHQVAEFGIAAHWKYKEGGSPASCSSDAERFNWLRQLVDWQQKGGN 418
Query: 554 KD 555
D
Sbjct: 419 DD 420
>gi|56750188|ref|YP_170889.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
gi|56685147|dbj|BAD78369.1| GTP pyrophosphokinase [Synechococcus elongatus PCC 6301]
Length = 764
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 160/355 (45%), Positives = 216/355 (60%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ RASG+PY+ H V A LL +G ++ V+ AG LHD ++D ++
Sbjct: 44 LIARAFRFAYSLHEGQYRASGEPYIAHPVAVAGLLRDLGGSAAVICAGFLHDVVEDTEVT 103
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +L
Sbjct: 104 PEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTEQQAENFRRMFLAMAQDIRVIL 156
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++R AKET++IF PLANRLGI K +LE+L FK+L+ +Q
Sbjct: 157 VKLADRLHNMRTLEHLASTKQKRIAKETMDIFAPLANRLGIGRVKWELEDLSFKYLDAEQ 216
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + E EA + +++ L L I + + GR K LYSI+ KM ++
Sbjct: 217 YRSIQGHVAEKRADREARLEQSVQILRDRLSQIGIEPVDVSGRPKHLYSIYRKMQMQQKE 276
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI D+ LR+IV + ++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 FHEIFDVAALRIIVNSNDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVIGL 336
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW+YKE F + W R +L WQ
Sbjct: 337 SGRPLEIQIRTLEMHRIAEYGIAAHWKYKESGGSAGKFSTEDEKFTWLRQLLEWQ 391
>gi|302389921|ref|YP_003825742.1| (p)ppGpp synthetase I SpoT/RelA [Thermosediminibacter oceani DSM
16646]
gi|302200549|gb|ADL08119.1| (p)ppGpp synthetase I, SpoT/RelA [Thermosediminibacter oceani DSM
16646]
Length = 721
Score = 288 bits (738), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 159/353 (45%), Positives = 219/353 (62%), Gaps = 12/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A+ AH GQ R SG+ ++ H +E AM+LA + ++ +AA LLHD ++D
Sbjct: 21 ELVRRAYEFAKNAHDGQHRVSGELFIFHPLEVAMILADLELDTITIAASLLHDVVEDTNY 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + I + FG+ +A LV+GV+KLS+L +E +A+ L MFLAMA D R +L
Sbjct: 81 SLEDIAKNFGSEIALLVDGVTKLSKLEYKTKEEQ------QAENLRKMFLAMAKDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++ A ETLEIF PLA+RLGIS K +LE+L F++L P+
Sbjct: 135 IKLADRLHNMRTLKYLPEKKQKEIAVETLEIFAPLAHRLGISKIKWELEDLAFRYLEPNH 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL K+ + E + + I L + L I + GR K YSI+ KM ++ +
Sbjct: 195 YYELVDKVAKKRREREEHINNMIALLRERLTAAGIKAEI-QGRPKHFYSIYKKMKEQNKS 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I D+ +R+IV+ DCY AL VVH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 254 FEQIFDLTAVRVIVDTVRDCYAALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDS 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHWRYKEG+ + + + W R +L WQ
Sbjct: 314 SGEPLEIQIRTYEMHKTAEYGIAAHWRYKEGNKEDD--FDKKLSWLREILDWQ 364
>gi|392412123|ref|YP_006448730.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
gi|390625259|gb|AFM26466.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfomonile tiedjei DSM
6799]
Length = 737
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 148/376 (39%), Positives = 227/376 (60%), Gaps = 18/376 (4%)
Query: 176 GNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 235
G ++ K + +A L D + A+ + + H GQ R SG+PYL+H V +M+LA
Sbjct: 27 GEIQDLVKSYYPDADL-------DLIRAAYVYSAQVHLGQTRRSGEPYLVHPVAVSMILA 79
Query: 236 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 295
+ + VA GLLHDT++D + + I R FG +A LV+GV+K+S++ ++E
Sbjct: 80 QMKLDEASVATGLLHDTVEDTLATLEEIERFFGKEIAALVDGVTKISKIEFQSKEER--- 136
Query: 296 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 354
+A+ M LAM+ D R +++KLADRLHNM TL +P + R A+ETL+I+ PLA
Sbjct: 137 ---QAENFRKMILAMSRDIRVLMVKLADRLHNMRTLGPMPPDAQVRIARETLDIYAPLAA 193
Query: 355 RLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISF 412
RLGI + +LE+L F+++NP++++ ++ +L E E + + + + ++ NI
Sbjct: 194 RLGIYWMRTELEDLAFRYVNPERYSTIARRLEESLKQREEYANNVLRIITEKIEQYNIKG 253
Query: 413 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 472
+ GR+K ++SIH KM+ + L D+IHD+ R+I+ N +CY L ++H LW VPG+
Sbjct: 254 -TIKGRNKEIFSIHQKMITQHLDFDQIHDLTAFRIILNNVSECYAVLGLIHSLWRPVPGR 312
Query: 473 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
KDYI PK NGYQSLHT V G + +E+QIR+ EM L AE G AAHW YKEG +
Sbjct: 313 FKDYIAMPKSNGYQSLHTTVIGPEGLRIEIQIRSTEMDLIAEEGIAAHWSYKEGRIPEAE 372
Query: 533 FVLQMVEWARWVLTWQ 548
++V W R ++ WQ
Sbjct: 373 DA-KVVNWLRQMMEWQ 387
>gi|87300813|ref|ZP_01083655.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
gi|87284684|gb|EAQ76636.1| metal dependent phosphohydrolase [Synechococcus sp. WH 5701]
Length = 779
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/363 (44%), Positives = 219/363 (60%), Gaps = 10/363 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF A + H GQ+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 68 EALLASAFDFAFQLHDGQVRATGEPYIIHPVAVADLLRDIGASAGVIAAGFLHDVVEDTD 127
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ + + FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 128 VTPEELEVHFGAEVRALVEGVTKLGGI------HFTNHTEAQAENLRRMFLAMASDIRVV 181
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 182 LVKLADRLHNMRTLGALKPEKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKILEPE 241
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ ++ E + + + L Q L+ + + GR K LY I KM ++
Sbjct: 242 AYGEIKQQVASKRSDREERLAATVALLMQRLQGAGLHDCEVTGRPKHLYGIWSKMQMQQK 301
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 302 AFHEIFDVAALRILTPNLEGCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 361
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT EMH AE+G AAHW+YKEG S+ + W R ++ WQ + +
Sbjct: 362 RHR-PIEVQIRTTEMHQVAEYGIAAHWKYKEGGSPASAGAAERFNWLRQLVDWQQDDGGE 420
Query: 555 DRS 557
D S
Sbjct: 421 DSS 423
>gi|401679361|ref|ZP_10811292.1| GTP diphosphokinase [Veillonella sp. ACP1]
gi|400219582|gb|EJO50446.1| GTP diphosphokinase [Veillonella sp. ACP1]
Length = 746
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 234/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|225021310|ref|ZP_03710502.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
ATCC 33806]
gi|224946043|gb|EEG27252.1| hypothetical protein CORMATOL_01329 [Corynebacterium matruchotii
ATCC 33806]
Length = 744
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 168/400 (42%), Positives = 240/400 (60%), Gaps = 22/400 (5%)
Query: 158 SAALIDELTFN-MEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQM 216
SA L LT N ++ N V L + +EF A + + + +A+ AER H G
Sbjct: 2 SARLARSLTGNRVKVNPVLEPLLSIHREFHPKADV-------ELLSRAYDTAERLHEGVF 54
Query: 217 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 276
R SGDPY+ H + A + A IG ++T + A LLHDT++D S D + FG VA LV+
Sbjct: 55 RKSGDPYITHPLAVATIAAEIGMDTTTIIASLLHDTVEDTEYSLDDLTNDFGEEVARLVD 114
Query: 277 GVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL 335
GV+KL +++ A EA+ + M +AMA D R ++IK+ADRLHNM T+ LP
Sbjct: 115 GVTKLDKVALGA--------AAEAETIRKMVMAMAQDPRVLVIKVADRLHNMRTMRFLPP 166
Query: 336 CKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAM 393
K+ + A++TL++ PLA+RLG+S+ K +LE+L F L P ++ E+ + + +
Sbjct: 167 EKQAKKARQTLDVIAPLAHRLGMSSVKWELEDLSFAILYPKKYDEVVRLVADRAPSRDRY 226
Query: 394 VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEE 453
+ I L+Q LK+ NI V GR K +SI+ KM+ + DEI D+ G+R++V+N
Sbjct: 227 LQEIISILQQGLKENNIDAEV-KGRPKHYWSIYQKMVMRGKDFDEIFDLVGIRILVDNLN 285
Query: 454 DCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQA 513
+CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+G PLEVQ+RT EMH+ A
Sbjct: 286 NCYAAIGVVHSLFAAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKPLEVQVRTHEMHVNA 345
Query: 514 EFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 551
E+G AAHWRYKE HS + + W R +L WQ EA
Sbjct: 346 EYGIAAHWRYKETKGSHSGEQAEIDQMAWMRQLLDWQKEA 385
>gi|381191174|ref|ZP_09898685.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
gi|380450963|gb|EIA38576.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
sp. RL]
Length = 727
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 249/417 (59%), Gaps = 42/417 (10%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 380 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 432
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V
Sbjct: 324 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRV 381
Query: 539 EWARWVLTWQ---------CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
W + + WQ EA++KD +G + P P A F+Y
Sbjct: 382 SWLKSIQEWQKEFSSSREFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|345023332|ref|ZP_08786945.1| GTP pyrophosphokinase [Ornithinibacillus scapharcae TW25]
Length = 732
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 159/387 (41%), Positives = 233/387 (60%), Gaps = 21/387 (5%)
Query: 171 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 230
+NI NL A+ +L+ + F+I+A+ AE+AH GQ R SG+ Y++H ++
Sbjct: 5 ENITIDNLIEKARSYLSEEDIH-------FIIRAYQYAEKAHEGQFRKSGEAYIIHPIQV 57
Query: 231 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 290
A +L + + +A G LHD ++D ++ + I F VA LV+GV+KL ++ ++E
Sbjct: 58 AGILVDLKMDPETIAGGFLHDVVEDTDITLEMIEEEFNKEVAMLVDGVTKLGKIKYKSKE 117
Query: 291 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 349
+A+ MF+AMA D R +LIKLADRLHNM TL LP K++ A ETLEIF
Sbjct: 118 AQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLPPEKQRIKANETLEIF 171
Query: 350 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKD 407
PLA+RLGIST K +LE+ ++LNP Q+ + + + D+ + + I+++ L++
Sbjct: 172 APLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKRDQRVSYIDEVIQEVSDQLEE 231
Query: 408 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 467
NI + GR K LYSI+ KM+K+ +EI+D+ +R++V + +DCY L ++H W
Sbjct: 232 LNIEAEI-SGRPKHLYSIYQKMVKQNKQFNEIYDLLAVRVLVNSIKDCYAVLGIIHTCWK 290
Query: 468 EVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG- 526
+PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH AE+G AAHW YKEG
Sbjct: 291 PMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEYGIAAHWAYKEGK 350
Query: 527 --DCQHSSFVLQMVEWARWVLTWQCEA 551
+ +F + + W R +L WQ E
Sbjct: 351 QINNDKKTFE-EKLSWFREILEWQNET 376
>gi|238018954|ref|ZP_04599380.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
gi|237864438|gb|EEP65728.1| hypothetical protein VEIDISOL_00814 [Veillonella dispar ATCC 17748]
Length = 746
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 235/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ TFN E + E Y +L + + V+KAF A++AH GQ+RAS
Sbjct: 10 ALVEQGTFNKEKALAE--FMEYIHTYLTDDECNQ-------VLKAFELADKAHEGQLRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A L+HD ++D S + + + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLMAALMHDVVEDTSYSKEDLEKMFGSEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKLADRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLADRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQAREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+ +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMSQLTKALGEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTIPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKNGDKDFDQKVAWLRQVLEWQ 385
>gi|222529929|ref|YP_002573811.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
gi|222456776|gb|ACM61038.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor bescii DSM
6725]
Length = 726
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 227/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ R SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHDGQSRNSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + + R FG +A+LV+GV+KL +L SKL R+ A+ M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------AENYRKMLIAMAKDIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKKIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 317 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|260434691|ref|ZP_05788661.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
gi|260412565|gb|EEX05861.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)
[Synechococcus sp. WH 8109]
Length = 777
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 164/362 (45%), Positives = 217/362 (59%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFGFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D I FG+ V +LVEGV+KL + R +A+ L MFLAMA + R V
Sbjct: 126 VTPDQIELHFGSEVRELVEGVTKLGGIHFNDR------TEAQAENLRRMFLAMASNIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRLHNMRTLGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + L + L+ + + GR K L+ I KM +++
Sbjct: 240 AFREIQEEVATKRSEREQRLGVTVGLLNERLERAGLEHCEVSGRPKHLFGIWSKMQRQQK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR++ N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 EFHEIYDVAALRILTPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AEFG AAHW+YKEG SS + W R ++ WQ E +
Sbjct: 360 RHR-PIEVQIRTLEMHHVAEFGIAAHWKYKEGGSPASSGSDAERFNWLRQLVDWQQEGGN 418
Query: 554 KD 555
D
Sbjct: 419 DD 420
>gi|386359779|ref|YP_006058024.1| RelA/SpoT family (p)ppGpp synthetase [Thermus thermophilus JL-18]
gi|383508806|gb|AFH38238.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus thermophilus JL-18]
Length = 724
Score = 288 bits (737), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 249/417 (59%), Gaps = 42/417 (10%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 24 VQEAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 83
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 84 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 140
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 141 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 200
Query: 380 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 432
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 201 SLSARIQATQEARERLIQKAIHLLQETLTRDELLQSQLQGFEVTGRPKHLYSIWKKMERE 260
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 261 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 320
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V
Sbjct: 321 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRV 378
Query: 539 EWARWVLTWQ---------CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
W + + WQ EA++KD +G + P P A F+Y
Sbjct: 379 SWLKSIQEWQKEFSSSREFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 433
>gi|359461025|ref|ZP_09249588.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris sp. CCMEE 5410]
Length = 732
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 15/370 (4%)
Query: 189 AQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 248
A+ K I + + +AF + H GQ RASG+PY+ H V A LL +G ++ ++AAG
Sbjct: 7 AEDKDGIAEQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGF 66
Query: 249 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMF 307
LHD ++D ++ + I FG V LVEGV+KLS+ N ++KT EA+ MF
Sbjct: 67 LHDVVEDTDVTPETIEAEFGLEVRQLVEGVTKLSKF-------NFSTKTEREAENFRRMF 119
Query: 308 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 366
LAMA D R +++KLADRLHNM TL+ LP K++R A+ET ++F PLANRLGI +K +LE
Sbjct: 120 LAMAQDIRVIVVKLADRLHNMRTLEHLPPAKQRRIAQETRDVFAPLANRLGIWRFKWELE 179
Query: 367 NLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
+L FK+L PD + ++ + + E + AI L L+ + L + GR K L+S
Sbjct: 180 DLAFKYLEPDTYRKMQQLVADKRTDREEHIEQAITILHDRLEPICSNHLEISGRPKHLFS 239
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I KM +++ EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N
Sbjct: 240 ISQKMERQQKEFHEIYDVAAVRVIVKTNEECYRALAVVHDCFRPIPGRFKDYIGLPKSNR 299
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL----QMVEW 540
YQSLHTVV G G PLEVQIRT+ MH AE+G AAHW+YKE Q + W
Sbjct: 300 YQSLHTVVIGLGGRPLEVQIRTEAMHHIAEYGIAAHWKYKESSNQPGKTAWSPDDEKFTW 359
Query: 541 ARWVLTWQCE 550
R +L WQ +
Sbjct: 360 LRQLLEWQSD 369
>gi|443474532|ref|ZP_21064506.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
gi|443020698|gb|ELS34625.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena biceps PCC 7429]
Length = 761
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 161/382 (42%), Positives = 229/382 (59%), Gaps = 18/382 (4%)
Query: 173 IVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 232
+V+ ++ + + +Q + ED V +A A R H GQ RASG+PY+LH + A
Sbjct: 34 VVDASIPDWLRSGWEKSQRGEILENEDVVCRALDFAYRLHDGQCRASGEPYILHPISVAA 93
Query: 233 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 292
+L +G ++ ++AAG LHD ++D +S D I FG + LVEGV+KLS KL+ E+
Sbjct: 94 ILKDLGGSNAMIAAGFLHDVVEDTDVSCDQIEEKFGKEIRQLVEGVTKLS---KLSFESK 150
Query: 293 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 351
T S +A+ MFLAMA D R +++KLADRLHNM TL L K+ ++ET EIF P
Sbjct: 151 TES---QAENFRRMFLAMAQDIRVIIVKLADRLHNMRTLQHLRSEKQVLISRETREIFAP 207
Query: 352 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKN 409
LANRLG+ K +LE++ FK++ P+Q+ + S + E + + +T + L L
Sbjct: 208 LANRLGLGQIKWELEDIAFKYIEPEQYQMMESLVAETHESRQEQLTEVTKVLGDRLASMG 267
Query: 410 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 469
I + GR K LY I KM ++K +EI+DI +R+IV +E+CY+ L VVH + +
Sbjct: 268 IDDFEISGRPKHLYGIFRKMERQKKQYNEIYDIQAVRVIVNTKEECYRVLAVVHDHFCPI 327
Query: 470 PGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---- 525
PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH A++G AAHW+YKE
Sbjct: 328 PGRFKDYIGLPKPNRYQSLHTAVIGPKGQPVEVQIRTWEMHHIADYGIAAHWKYKESNSV 387
Query: 526 -----GDCQHSSFVLQMVEWAR 542
GD Q +++ Q+VEW R
Sbjct: 388 SKPLKGDDQKFTWLRQLVEWQR 409
>gi|438002543|ref|YP_007272286.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
gi|432179337|emb|CCP26310.1| GTP pyrophosphokinase [Tepidanaerobacter acetatoxydans Re1]
Length = 716
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A+ AH GQ R SG+ ++ H + AM+LA + + +AAGLLHD ++D
Sbjct: 15 DLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDY 74
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG+ +A LV+GV+KL +L +E +A+ L MF AMA D R +L
Sbjct: 75 TIEDIEKIFGSEIAILVDGVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIIL 128
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL ++P K++ A ET++IF PLA+RLGIS K +LE+L F++L P+
Sbjct: 129 IKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEH 188
Query: 378 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E + I+ L + L I+ + GR K YSI+ KM + T
Sbjct: 189 YYDLVEKVAKKRQERENHINKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKT 247
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY AL VVH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 248 FEQIYDLTAVRVIVNTVKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDS 307
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT EMH AE+G AAHWRYKEGD + F Q + W R +L WQ E
Sbjct: 308 SGDPLEIQIRTYEMHKTAEYGIAAHWRYKEGDKNSNEFE-QKLSWLREILDWQRE 361
>gi|257792451|ref|YP_003183057.1| (p)ppGpp synthetase I SpoT/RelA [Eggerthella lenta DSM 2243]
gi|317490319|ref|ZP_07948805.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325833401|ref|ZP_08165850.1| GTP diphosphokinase [Eggerthella sp. HGA1]
gi|257476348|gb|ACV56668.1| (p)ppGpp synthetase I, SpoT/RelA [Eggerthella lenta DSM 2243]
gi|316910609|gb|EFV32232.1| RelA/SpoT family protein [Eggerthella sp. 1_3_56FAA]
gi|325485325|gb|EGC87794.1| GTP diphosphokinase [Eggerthella sp. HGA1]
Length = 802
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 221/357 (61%), Gaps = 10/357 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + KAF A AH GQ R SG+P++ H VE A++LA + + + A LLHDT++D
Sbjct: 72 EAMLAKAFRFASEAHEGQCRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTS 131
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D + F VA LVEGV+K++++ + + A+ + MF+AM+ D R +
Sbjct: 132 VTRDQVEAEFNPQVAQLVEGVTKITRIEVESLTDEQAAT------IRKMFVAMSKDIRVI 185
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
+IKLADRLHNM TL AL +R A+ETLEI+ P+A+RLGI+ K +LE+L F +L P+
Sbjct: 186 VIKLADRLHNMRTLGALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPN 245
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++S + E E + I L ++ NI ++ GR K LYSI+ KM KK
Sbjct: 246 KFKQISRMVTESRSEREGYLDQIISILHDEMEKVNIQAQIM-GRPKHLYSIYQKMTKKGK 304
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ +DCY AL VH LW +PG+ KDYI PKFN YQSLHT V G
Sbjct: 305 GFSEIYDLIAVRVIVKSVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIG 364
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT++MH Q+E+G AAHWRYKE + + Q + W R ++ WQ E+
Sbjct: 365 PAGRPLEVQIRTEDMHRQSEYGVAAHWRYKEKGGKSGDALDQQLAWLRQMVDWQDES 421
>gi|303230780|ref|ZP_07317527.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
gi|302514540|gb|EFL56535.1| GTP diphosphokinase [Veillonella atypica ACS-049-V-Sch6]
Length = 746
Score = 288 bits (736), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 162/392 (41%), Positives = 234/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ FN E+ + E Y +L + + D ++KAF A++AH GQ RAS
Sbjct: 10 ALVEQKGFNKEEALKE--FMDYVHSYLGDDEC-------DQIMKAFTLADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A LLHD ++D + + I + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVAEILAHLQIDHITLIAALLHDVVEDTEYTKEDIEKLFGSEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L PD++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPDKYYDLVDQMKQKRQAREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+E+L +AL + I + GR K YSI+ KM K + +I+D+ +R+IV+ DCY
Sbjct: 235 TMEQLTKALGEAGIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDTVPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H +W +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSIWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKGADKEFDQKVAWLRQVLEWQ 385
>gi|46199657|ref|YP_005324.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|384431896|ref|YP_005641256.1| (p)ppGpp synthetase I SpoT/RelA [Thermus thermophilus SG0.5JP17-16]
gi|46197283|gb|AAS81697.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB27]
gi|333967364|gb|AEG34129.1| (p)ppGpp synthetase I, SpoT/RelA [Thermus thermophilus
SG0.5JP17-16]
Length = 727
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 249/417 (59%), Gaps = 42/417 (10%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 380 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 432
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQKAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V
Sbjct: 324 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRV 381
Query: 539 EWARWVLTWQ---------CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
W + + WQ EA++KD +G + P P A F+Y
Sbjct: 382 SWLKSIQEWQKEFSSSREFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|55981686|ref|YP_144983.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [Thermus
thermophilus HB8]
gi|55773099|dbj|BAD71540.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (ppGpp
synthase) [Thermus thermophilus HB8]
Length = 727
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 171/417 (41%), Positives = 249/417 (59%), Gaps = 42/417 (10%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE AHRGQ+R SG+PY+ H V A +LA + ++ VAAGLLHDTL+D ++
Sbjct: 27 VREAYRFAEEAHRGQLRRSGEPYITHPVAVAEILAGLQMDADTVAAGLLHDTLEDCGVAP 86
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + R FG V +VEG +K+S+L KLA N + A+ L MF+AMA D R +++K
Sbjct: 87 EELERRFGPTVRRIVEGETKVSKLYKLA---NLEGEERRAEDLRQMFIAMAEDVRIIIVK 143
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+
Sbjct: 144 LADRLHNLRTLEHMPPEKQKRIAQETLEIYAPLAHRLGMGQLKWELEDLSFRYLHPEAFA 203
Query: 380 ELSSKL--VECFDEAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKK 432
LS+++ + E ++ AI L++ L +D+ + + GR K LYSI KM ++
Sbjct: 204 SLSARIQATQEARERLIQRAIHLLQETLARDELLQSQLQGFEVTGRPKHLYSIWKKMERE 263
Query: 433 KLTMDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITR 479
T+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI
Sbjct: 264 GKTLEQIYDLLAVRVILDPKPAPTRESQALREKQVCYHVLGLVHALWQPIPGRVKDYIAV 323
Query: 480 PKFNGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMV 538
PK NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V
Sbjct: 324 PKPNGYQSLHTTVIALEGL-PLEVQIRTREMHRVAEYGIAAHWLYKEG-LTDPEEVKRRV 381
Query: 539 EWARWVLTWQ---------CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
W + + WQ EA++KD +G + P P A F+Y
Sbjct: 382 SWLKSIQEWQKEFSSSREFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 436
>gi|332799394|ref|YP_004460893.1| (p)ppGpp synthetase I SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697129|gb|AEE91586.1| (p)ppGpp synthetase I, SpoT/RelA [Tepidanaerobacter acetatoxydans
Re1]
Length = 721
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A+ AH GQ R SG+ ++ H + AM+LA + + +AAGLLHD ++D
Sbjct: 20 DLIRKAYMFAKEAHSGQHRVSGELFISHPLGVAMILADLELDIPTIAAGLLHDVVEDTDY 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG+ +A LV+GV+KL +L +E +A+ L MF AMA D R +L
Sbjct: 80 TIEDIEKIFGSEIAILVDGVTKLGKLEFKTKEEQ------QAENLRKMFFAMAKDIRIIL 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL ++P K++ A ET++IF PLA+RLGIS K +LE+L F++L P+
Sbjct: 134 IKLADRLHNMRTLKSMPEEKQREKAMETIDIFAPLAHRLGISKIKWELEDLAFRYLEPEH 193
Query: 378 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E + I+ L + L I+ + GR K YSI+ KM + T
Sbjct: 194 YYDLVEKVAKKRQERENHINKMIDILNERLLATGINAEI-QGRPKHFYSIYKKMKDQNKT 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++I+D+ +R+IV +DCY AL VVH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 253 FEQIYDLTAVRVIVNTVKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNMYQSLHTTVIDS 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT EMH AE+G AAHWRYKEGD + F Q + W R +L WQ E
Sbjct: 313 SGDPLEIQIRTYEMHKTAEYGIAAHWRYKEGDKNSNEFE-QKLSWLREILDWQRE 366
>gi|188588536|ref|YP_001920360.1| GTP pyrophosphokinase [Clostridium botulinum E3 str. Alaska E43]
gi|188498817|gb|ACD51953.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E3 str.
Alaska E43]
Length = 728
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 227/364 (62%), Gaps = 23/364 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+Y AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYQLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTT 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH----SSFVLQMVEWARWVLTW 547
V G E+QIRT EMH AE+G AAHW+YKEGD F ++V W R +L W
Sbjct: 308 VIGNQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDKNEEDKAKDFEKKLV-WLRDMLEW 366
Query: 548 QCEA 551
Q E
Sbjct: 367 QKET 370
>gi|238854672|ref|ZP_04645002.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260664385|ref|ZP_05865237.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
gi|238832462|gb|EEQ24769.1| GTP pyrophosphokinase [Lactobacillus jensenii 269-3]
gi|260561450|gb|EEX27422.1| ppGpp synthetase [Lactobacillus jensenii SJ-7A-US]
Length = 745
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 212/335 (63%), Gaps = 14/335 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE+AH GQ RASG PY++H + A +A +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEYAEKAHSGQKRASGQPYIIHPTQVAGTVANLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 87 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 141 KLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 200
Query: 379 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 201 YNIVNQMNSKRSER--EGYIDTAITYLKDTLDGLHIKYDIY-GRPKHIYSIYKKMVNKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 258 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G PLE+QIRT++MH AE+G AAHW YK+GD Q
Sbjct: 318 PGGKPLEIQIRTQQMHEVAEYGVAAHWAYKKGDTQ 352
>gi|227499575|ref|ZP_03929682.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
gi|227218334|gb|EEI83588.1| GTP diphosphokinase [Anaerococcus tetradius ATCC 35098]
Length = 726
Score = 288 bits (736), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ AE HRGQ R SG+ Y +H + A L+ + + + AGL+HD L+D +
Sbjct: 26 NLIKKAYDFAELHHRGQKRNSGEDYFIHPIAVARKLSEMKLDDETICAGLMHDVLEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG + LV+GV+KL L+ +RE +A+ + M +AM+ D R VL
Sbjct: 86 SREQMAEVFGEEITFLVDGVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL+ + K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P++
Sbjct: 140 IKLSDRLHNMKTLEYMTRKKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEK 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL+ + EA + I+ L ++L NI+F + GR KSLYSI+ KM + +
Sbjct: 200 YYELAEMVNVKRREREAYINEIIDTLSKSLSGTNINFEI-SGRPKSLYSINKKMERNGIA 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R+IV+ +CY L VH LW +P ++KDYI +PK NGY+SLHT V GE
Sbjct: 259 FDEIYDLTAIRVIVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGE 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P EVQIRT++MH + E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 319 DSRPFEVQIRTRKMHKECEYGVAAHWRYKENNNTKSDFDDAM-SFLRRIVEWQQEG 373
>gi|425464751|ref|ZP_18844061.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
gi|389833148|emb|CCI22581.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9809]
Length = 765
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 217/358 (60%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ EA + + L + L + I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|212638570|ref|YP_002315090.1| GTP pyrophosphokinase [Anoxybacillus flavithermus WK1]
gi|212560050|gb|ACJ33105.1| GTP pyrophosphokinase (ppGpp synthetase) [Anoxybacillus
flavithermus WK1]
Length = 732
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 217/354 (61%), Gaps = 10/354 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ A+ AHR Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FIERAYEFAKEAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAAGFLHDVVEDTHVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FG VA LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 KEDLEREFGKEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPIEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ L + I + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYLEEVIQEMRARLLEVGIQAEI-SGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVVGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AEFG AAHW YKEG + + + W R ++ WQ E
Sbjct: 320 GEPLEVQIRTFEMHHIAEFGIAAHWAYKEGKTIRPNTFEEKLSWFREIVEWQNE 373
>gi|166368056|ref|YP_001660329.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
gi|166090429|dbj|BAG05137.1| GTP pyrophosphokinase [Microcystis aeruginosa NIES-843]
Length = 765
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 217/358 (60%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAHKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEARFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR A ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRIALETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ EA + + L + L + I L L GR K LY I+ KM +
Sbjct: 221 AYRAVQLLVSEKRID--REARIETVTNTLREKLPEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAADEKFAWLRNLLDWQ 396
>gi|187778360|ref|ZP_02994833.1| hypothetical protein CLOSPO_01952 [Clostridium sporogenes ATCC
15579]
gi|187771985|gb|EDU35787.1| RelA/SpoT family protein [Clostridium sporogenes ATCC 15579]
Length = 723
Score = 288 bits (736), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 221/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + + L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKE ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEA-VENSNNIDLKLTWLREMLDWQKET 366
>gi|424826931|ref|ZP_18251766.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
gi|365980468|gb|EHN16498.1| GTP pyrophosphokinase [Clostridium sporogenes PA 3679]
Length = 723
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 221/356 (62%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ KA+ A AH+ Q R SG+PY+ H E A++L +G + + AGL+HD ++D
Sbjct: 19 EFIKKAYNFACNAHKEQKRISGEPYITHPEEVAIILFEMGMDVNTMIAGLMHDVVEDTQY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + + FG VADLV GV+KL ++ +E +AD + M LAM D R +L
Sbjct: 79 TYEDVAKEFGNEVADLVNGVTKLGKIEYKTKEEQ------QADNVRKMLLAMTKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P+ K++ A+ETL+I+ PLA+RLGIS K +LE+L F+++NP++
Sbjct: 133 IKLADRLHNMRTLRFMPVEKQKEKAQETLDIYAPLAHRLGISKIKWELEDLSFRYINPNE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ E E + + L+Q LK I + GR K YSI+ KM K
Sbjct: 193 YYFLVRKIAEKRAEREEHIKEIVSNLQQNLKKAGIESEI-DGRPKHFYSIYKKMHNKNKN 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I D+ +R++V+ +DCY AL + H ++ +PG+ KDYI PK N YQSLH+ V G
Sbjct: 252 LDQIFDLTAVRILVDTVKDCYAALGIAHTVYKPIPGRFKDYIAMPKPNMYQSLHSTVMGV 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRT EMH AE+G AAHW+YKE ++S+ + + W R +L WQ E
Sbjct: 312 GGRPFEIQIRTYEMHKTAEYGIAAHWKYKEA-VENSNNIDLKLTWLREMLDWQKET 366
>gi|269926113|ref|YP_003322736.1| (p)ppGpp synthetase I SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
gi|269789773|gb|ACZ41914.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobaculum terrenum ATCC
BAA-798]
Length = 721
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 230/358 (64%), Gaps = 8/358 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D + +A+ A++AH G+ R SG+P++ H V A++LA + ++ +A+ LLHDT++D
Sbjct: 19 KDLIRRAYEVADKAHEGEYRKSGEPFISHPVNVALILADLKQDAQAIASALLHDTVEDTN 78
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLA--RENNTASKTVEADRLHTMFLAMA-DAR 314
L+ D I FG V+ LV+G++KL+++ +L+ E + + +A+ L MFLAM D R
Sbjct: 79 LTLDDIETIFGPEVSRLVDGLTKLNKI-RLSPDDEKDPKEQQAQAENLRKMFLAMVEDPR 137
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
VLIKLADRLHNM T++ LP K+ A+ETLEI+ PLA RLGI ++ +LE+L FK L
Sbjct: 138 VVLIKLADRLHNMRTIEHLPRDKQLSKARETLEIYAPLAGRLGIFKFRSELEDLSFKVLY 197
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
PD++ E+++++ + AI+ L++AL + I + GR K LYSI+ KM +K
Sbjct: 198 PDKYREIAAQVERSGVTRGKYIEQAIDVLKKALDAEGIPAEI-TGRRKHLYSIYRKMEQK 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ + D+I D+ GLR+I + CY AL V+H +W +PG+ DYI PK + YQSLHT V
Sbjct: 257 QRSFDQIFDVLGLRVITDEVMQCYAALGVIHSIWRPIPGEFDDYIAMPKESMYQSLHTAV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G PLE+QIRT++MH AE+G AAHWRYKEG + + + W R +L W+ E
Sbjct: 317 VGLDGKPLEIQIRTRDMHEVAEYGIAAHWRYKEGKKANEA-AEHRITWLRQLLEWRDE 373
>gi|30264477|ref|NP_846854.1| GTP pyrophosphokinase [Bacillus anthracis str. Ames]
gi|30259135|gb|AAP28340.1| GTP diphosphokinase [Bacillus anthracis str. Ames]
Length = 727
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 257/473 (54%), Gaps = 56/473 (11%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPT 609
EA S+A++ S K D VFV + D V E P
Sbjct: 374 EA---------------------SNAEEFMESLKIDLFSDM-VFVFTPKGD---VMELPL 408
Query: 610 SSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 662
S +D R +S G + + ++N K V KLK GD++E+
Sbjct: 409 GSVPIDFAYRV------YSEIG---NKTIGAKVNGKMVT-LDYKLKTGDIIEI 451
>gi|225548080|ref|ZP_03769365.1| hypothetical protein RUMHYD_00059 [Blautia hydrogenotrophica DSM
10507]
gi|225040756|gb|EEG51002.1| RelA/SpoT family protein [Blautia hydrogenotrophica DSM 10507]
Length = 769
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 233/377 (61%), Gaps = 14/377 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E LA + H + KA+ A+ AH GQ R SG+PY++H + A++LA +
Sbjct: 33 EVLYEELLACVRKYHPSADLSMIEKAYRIAKNAHEGQFRKSGEPYIIHPLCVAIILADLE 92
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 297
+ + AGLLHD ++D ++ + I + FGA VA LV+GV+KL QLS +A K
Sbjct: 93 LDKETIVAGLLHDAVEDTIMTTEEIQQEFGAEVALLVDGVTKLGQLS------YSADKVE 146
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
++A+ L MFLAMA D R +LIKLADRLHNM TL + K+Q A+ET++I+ P+A RL
Sbjct: 147 LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQQEKARETMDIYAPIAMRL 206
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLV 414
GIS KV+L++L K+L PD + +L K L + E V + ++++ ++D I V
Sbjct: 207 GISKVKVELDDLALKYLKPDVYYDLVEKINLKKSEREDYVNQVVGQVKRHMEDAGIKAQV 266
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
GR K +SI+ KM+ + T+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ K
Sbjct: 267 -DGRIKHFFSIYRKMVNQDKTIDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFK 325
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV 534
DYI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE
Sbjct: 326 DYIAMPKPNMYQSLHTTLIGPKGQPFEIQIRTFEMHKTAEYGIAAHWKYKESSDGKKPIG 385
Query: 535 LQMVE---WARWVLTWQ 548
++ E W R +L WQ
Sbjct: 386 IREEEKLNWLRQILEWQ 402
>gi|428770116|ref|YP_007161906.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium aponinum PCC 10605]
gi|428684395|gb|AFZ53862.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium aponinum PCC
10605]
Length = 751
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/445 (38%), Positives = 255/445 (57%), Gaps = 31/445 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + +AF A H GQMR SG+PY+ H + A LL +G +S ++AAG LHD ++D
Sbjct: 38 NLICRAFQFAYSLHEGQMRKSGEPYIAHPIAVAELLRDLGGDSEMIAAGFLHDVVEDTPT 97
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V LVE V+KLS+ N +SKT +A+ MF+AMA D R +
Sbjct: 98 TPEDIEVMFGKNVRQLVEAVTKLSKF-------NFSSKTERQAENFRRMFIAMAQDIRVI 150
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TLD LP K++ A+ET EIF PLANRLGI +K +LE+L FK+L+P+
Sbjct: 151 VVKLADRLHNMRTLDFLPPEKQRLIAEETKEIFAPLANRLGIWHFKWELEDLSFKYLHPE 210
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ + + E EA + + I+ + Q L++ I + + GR K LY I+ KM+++K
Sbjct: 211 AYNKIKNLIAERRTDREARIENVIDTINQRLENLGIHPVEVKGRPKHLYGIYHKMMRQKK 270
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++I+DI +R+IV ++CY+ L VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 271 EFEQIYDIAAVRIIVNTNDECYRTLAVVHDAFRPIPGRFKDYIGLPKPNLYQSLHTTVVN 330
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHW+YKE + +H S + W R +L WQ +
Sbjct: 331 SNGRPLEIQIRTLEMHYVAEYGIAAHWKYKETGHSNHRHLSSDDEKFTWLRQLLDWQKDL 390
Query: 552 MSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQ-EFPTS 610
D++K + DD +++ P VI + +V +
Sbjct: 391 KDAQEYV----DNLK-----ENLFDDDVYAFTPNGD------VIALARGATAVDFAYRIH 435
Query: 611 STVMDLLERAGRGSSRWSPYGFPLK 635
S V + + + R + +WSP PL+
Sbjct: 436 SEVGNHM-KGARINDKWSPLDQPLQ 459
>gi|428212424|ref|YP_007085568.1| RelA/SpoT family (p)ppGpp synthetase [Oscillatoria acuminata PCC
6304]
gi|428000805|gb|AFY81648.1| (p)ppGpp synthetase, RelA/SpoT family [Oscillatoria acuminata PCC
6304]
Length = 754
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 217/357 (60%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H Q R SG+PY++H + A LL +G +S ++AAG LHD ++D ++
Sbjct: 45 LICRAFEFAYQLHECQRRKSGEPYIIHPIAVAGLLRELGGSSAMIAAGFLHDVVEDTEVT 104
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
D I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 105 PDEIQERFGEEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 157
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL++L KRQR A ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 158 VKLADRLHNMRTLESLADVKRQRIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPDS 217
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + E E + E L L++ I + GR K LY I+ KM ++
Sbjct: 218 YRQMQDLVAEKRIDRENRLNKVTETLRLRLEELGIGCTEVSGRPKHLYGIYQKMQRQNKK 277
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V+ E+CY+AL + H + +PG+ KDYI PK N YQSLHTVV G
Sbjct: 278 FEEIYDVAAVRILVQKSEECYRALAIAHDAFRPLPGRFKDYIGLPKPNRYQSLHTVVLGP 337
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE +S + W R +L WQ +
Sbjct: 338 TGRPIEVQIRTVEMHHVAEYGIAAHWKYKEAGSSYSKLNNDDEKFTWLRQLLEWQSD 394
>gi|116074036|ref|ZP_01471298.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
gi|116069341|gb|EAU75093.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. RS9916]
Length = 778
Score = 287 bits (735), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 209/347 (60%), Gaps = 10/347 (2%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D L+ D + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTDLTADQLEEHFGPEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RALVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
+L K++R A+ET EI+ PLANRLGI +K +LE+L FK L P+ E++ ++
Sbjct: 194 GSLKREKQERIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREITEEVATKRS 253
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + ++ L L + + GR K LY I KM +++ EI+D+ +R+I
Sbjct: 254 EREERLGVTLKLLGDRLAAVGLESCEVNGRPKHLYGIWSKMQRQQKAFHEIYDVAAVRII 313
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT E
Sbjct: 314 TPNLETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTAE 372
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH +EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 373 MHQVSEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|310829081|ref|YP_003961438.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
gi|308740815|gb|ADO38475.1| (p)ppGpp synthetase I [Eubacterium limosum KIST612]
Length = 725
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/384 (39%), Positives = 228/384 (59%), Gaps = 26/384 (6%)
Query: 186 LANAQLKHKI-------------FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 232
+AN ++HKI + ++KA++ A+ AH+ Q R SG+ Y++H V A
Sbjct: 1 MANEAIEHKIDSLIELVKKNNPDADTELILKAYHLADGAHKDQKRLSGEAYIIHPVSVAY 60
Query: 233 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 292
+LA ++ + A +LHD ++D +YD I F VADLVEGV+K+ ++ ++E +
Sbjct: 61 ILAEYKMDTETIVAAILHDVIEDTSYTYDDIKEMFNEQVADLVEGVTKIGKIEYQSKEES 120
Query: 293 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 351
+A+ L M LAM+ D R +LIKL DRLHNM TL+ + K+ ++ETL+I+ P
Sbjct: 121 ------QAENLRKMVLAMSKDIRVILIKLVDRLHNMRTLEYMKESKQIEKSRETLDIYAP 174
Query: 352 LANRLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKN 409
+ANRLGI T K +LE+L K+L+PD + +L K + + E + I+ LE+ + +
Sbjct: 175 IANRLGIQTIKAELEDLALKYLDPDGYYDLVKKVKMKKQSREEYINKVIKILEKKIDEVG 234
Query: 410 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 469
I + GR K YSI+ KM + DEI+D+ +R+IV++ +DCY L +VH W +
Sbjct: 235 IEAKIY-GRSKHFYSIYRKMKAQNRNFDEIYDLIAVRVIVDSVKDCYGVLGIVHTQWKPI 293
Query: 470 PGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
PG+ KDYI PK N YQS+HT V G P E+QIRTKEMH AE+G AAHW+YKEG
Sbjct: 294 PGRFKDYIAMPKPNMYQSIHTTVIGPNGDPFEIQIRTKEMHETAEYGIAAHWKYKEGITD 353
Query: 530 HSSFVLQM---VEWARWVLTWQCE 550
++ L+ + W R +L WQ E
Sbjct: 354 SNNKELRYENKMSWLRQILEWQKE 377
>gi|301055915|ref|YP_003794126.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
gi|300378084|gb|ADK06988.1| GTP diphosphokinase [Bacillus cereus biovar anthracis str. CI]
Length = 727
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 184/473 (38%), Positives = 256/473 (54%), Gaps = 56/473 (11%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPT 609
EA S+A++ S K D VFV + D V E P
Sbjct: 374 EA---------------------SNAEEFMESLKIDLFSDM-VFVFTPKGD---VMELPL 408
Query: 610 SSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 662
S +D R S G + + ++N K V KLK GD++E+
Sbjct: 409 GSVPIDFAYRVH------SEIG---NKTIGAKVNEKMVT-LDYKLKTGDIIEI 451
>gi|312621838|ref|YP_004023451.1| (p)ppgpp synthetase i, spot/rela [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202305|gb|ADQ45632.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
kronotskyensis 2002]
Length = 726
Score = 287 bits (734), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 154/358 (43%), Positives = 226/358 (63%), Gaps = 16/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KAF A++ H GQ R SG+PY+LH +E A++LA + + + AGLLHD ++D
Sbjct: 26 NLIKKAFEFAQKHHDGQSRNSGEPYILHPLEVALILADLELDIPSIVAGLLHDVVEDTSA 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DAR 314
S + + R FG +A+LV+GV+KL +L SKL R+ + M +AMA D R
Sbjct: 86 SLEDVEREFGKEIAELVDGVTKLGKLEFTSKLERQ---------VENYRKMLIAMAKDIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+LIKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+
Sbjct: 137 VILIKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLSLRYLD 196
Query: 375 PDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P+ + +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++
Sbjct: 197 PEGYYDLVEKIAKKRVEREEYIKRIISLISEKLKEANIEVGQIDGRPKHFYSIYRKMKEQ 256
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V
Sbjct: 257 GKTLEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTV 316
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 317 IGPEGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 373
>gi|443315184|ref|ZP_21044689.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
gi|442785224|gb|ELR95059.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 6406]
Length = 762
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/359 (44%), Positives = 222/359 (61%), Gaps = 14/359 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +AF A H+GQMRASG+PY+ H + A LL +G +S ++AAG LHD ++D +
Sbjct: 45 ELVCRAFEFAYALHQGQMRASGEPYICHPIAVASLLRDLGGDSAMIAAGFLHDIVEDTDV 104
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V LVEGV+KLS+ N SKT +A+ MFLAMA DAR +
Sbjct: 105 TPEEIEAQFGGEVRRLVEGVTKLSKF-------NFQSKTERQAENFRRMFLAMAQDARVI 157
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L K++R A+ET EIF PLANRLGI +K +LE+L FK+L PD
Sbjct: 158 VVKLADRLHNMRTLEHLKPEKQRRIAQETSEIFAPLANRLGIGRFKWELEDLSFKYLEPD 217
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ + + E E+ + L + L++ + + + GR K LY I+ KM +++
Sbjct: 218 AYRHMQDCVSEKRTDRESRLQLVAATLRERLEEAGVKVVEVSGRPKHLYGIYRKMERQQK 277
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ +R+IV N+++CY+ L +VH + +PG+ KDYI PK N YQSLHTVV G
Sbjct: 278 AFHEIFDVAAVRVIVHNKDECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTVVLG 337
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL---QMVEWARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE ++ V + W R +L WQ +
Sbjct: 338 NHGRPIEVQIRTLEMHHVAEYGIAAHWKYKESGGSSNTQVTTDDEKFTWLRQLLEWQSD 396
>gi|113476259|ref|YP_722320.1| (p)ppGpp synthetase I SpoT/RelA [Trichodesmium erythraeum IMS101]
gi|110167307|gb|ABG51847.1| (p)ppGpp synthetase I, SpoT/RelA [Trichodesmium erythraeum IMS101]
Length = 750
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 164/365 (44%), Positives = 220/365 (60%), Gaps = 16/365 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H GQ R SG+PY+ H V A LL +G +ST++AAGLLHD ++D +
Sbjct: 42 LICRAFEFAYKLHEGQYRKSGEPYICHPVAVAGLLKYLGGDSTMIAAGLLHDIVEDTDVK 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG+ V LVEGV+KLS+ N ++KT ++A+ MFLAMA D R ++
Sbjct: 102 IEEIEEKFGSEVTLLVEGVTKLSKF-------NFSNKTELQAENFRRMFLAMAKDIRVIV 154
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL LP K+ A ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 155 VKLADRLHNMRTLQHLPSHKQLSKALETREIFAPLANRLGIGRIKWELEDLSFKYLEPNA 214
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + + EA + E L Q L I + GR K LY I+ KM K+
Sbjct: 215 YREIQELVADKRVDREARLLKMTENLRQKLDRLGIECYDISGRPKHLYGIYRKMYLKQKE 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
E++DI GLR+IVE EDCY+ L +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 FHEVYDISGLRIIVEKREDCYRTLAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGI 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQCEA 551
P+EVQIRT EMH AE+G AAHW+YKE +++ + + W R +L WQ +
Sbjct: 335 TGRPVEVQIRTVEMHHVAEYGIAAHWKYKETGYSNTNVNITTEDEKFTWLRQLLEWQSD- 393
Query: 552 MSKDR 556
+ DR
Sbjct: 394 LKDDR 398
>gi|256545119|ref|ZP_05472485.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
gi|256399160|gb|EEU12771.1| GTP diphosphokinase [Anaerococcus vaginalis ATCC 51170]
Length = 725
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 227/358 (63%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 NLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG + LV+GV+KL +L+ +E +A+ + M LAM+ D R +L
Sbjct: 86 TEEQMKENFGEEITFLVDGVTKLKKLNYKTKEEK------QAENIRKMVLAMSNDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 378 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ EL+ +K E EA + IE L++AL NI++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--REAYINQIIETLDKALSSSNINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVF 316
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
GE P EVQIRT++MH + E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 317 GEDSKPFEVQIRTRQMHYECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|23099479|ref|NP_692945.1| GTP pyrophosphokinase [Oceanobacillus iheyensis HTE831]
gi|22777708|dbj|BAC13980.1| GTP pyrophosphokinase (stringent response) [Oceanobacillus
iheyensis HTE831]
Length = 734
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 223/357 (62%), Gaps = 14/357 (3%)
Query: 201 VIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+I+ YE A AH+ Q R SG+PY++H V+ A +LA + +S ++AG LHD ++D ++
Sbjct: 27 LIEQAYEFASDAHKDQFRKSGEPYIIHPVQVAGILADLQMDSETISAGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F +A LV+GV+KL ++ +E +A+ MF+AMA D R ++I
Sbjct: 87 VEQLEEAFNHEIAMLVDGVTKLGKIRYETKEAQ------QAENHRKMFVAMAKDIRVIMI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLAPEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + +E + + I++L L NI + GR K LYSI+ KM+K+K
Sbjct: 201 YRIVQLMKQKREERESYIQEVIDELALELDTVNIE-AEMSGRPKHLYSIYQKMVKQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++VEN +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVENIKDCYAVLGIIHTNWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTKEMH AE+G AAHW YKEG + SSF + + W R +L WQ E
Sbjct: 320 GDPLEVQIRTKEMHDIAEYGIAAHWAYKEGKTSREKSSFE-EKLSWFREILEWQSET 375
>gi|423612609|ref|ZP_17588470.1| GTP pyrophosphokinase [Bacillus cereus VD107]
gi|401245334|gb|EJR51690.1| GTP pyrophosphokinase [Bacillus cereus VD107]
Length = 727
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 226/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 STVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|310658609|ref|YP_003936330.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
gi|308825387|emb|CBH21425.1| GTP pyrophosphokinase [[Clostridium] sticklandii]
Length = 729
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 225/354 (63%), Gaps = 11/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D VIKA+ A AH GQ R SG+ Y++H +E A +LA + + +AAGL+HD ++D +
Sbjct: 19 DIVIKAYNYAYNAHEGQYRKSGEKYIIHPLEVAKILAELELDVFTIAAGLMHDVVEDTEV 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S+ I R FG VA+LV+GV+KL ++ ++E +A+ L MF+AM D R +L
Sbjct: 79 SFSDIERLFGTEVAELVDGVTKLGKIEYKSKEE------TQAENLRKMFMAMGKDIRVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K + A ET+EI+ P+A+RLGIS K ++E++ ++L+P+
Sbjct: 133 IKLADRLHNMRTLKYMSEEKAKEKATETIEIYAPIAHRLGISRVKWEMEDIALRYLDPEG 192
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E A + I+ L+ L++ NI + GR K YSI+ KM + +
Sbjct: 193 YYDLIEKVSKKRREREAYIQGVIDLLKNKLEEANIEGDI-KGRAKHFYSIYRKMKYQSKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V++ +DCY + +VH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 FEEIYDLMAVRILVDSLKDCYGVVGIVHTIWKPMPGRFKDYIAMPKPNMYQSLHTTVLGP 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQ 548
PLE+QIRTKEMH AEFG AAHW+YKEG + S + + + W R ++ WQ
Sbjct: 312 DGEPLEIQIRTKEMHRTAEFGIAAHWKYKEGKIDPNESDMDKKLSWLRQMMEWQ 365
>gi|148240678|ref|YP_001226065.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
gi|147849217|emb|CAK24768.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. WH 7803]
Length = 797
Score = 287 bits (734), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 210/347 (60%), Gaps = 10/347 (2%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V
Sbjct: 100 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEV 159
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 160 RELVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 213
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 214 GALREEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRS 273
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 274 EREERLGVTVQLLSDRLAAAGLENCEVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRIL 333
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
+ E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT E
Sbjct: 334 TPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLE 392
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH +EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 393 MHQVSEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 439
>gi|229163355|ref|ZP_04291307.1| GTP pyrophosphokinase [Bacillus cereus R309803]
gi|228620136|gb|EEK77010.1| GTP pyrophosphokinase [Bacillus cereus R309803]
Length = 727
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LAN + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLANEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEVTLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGI+T
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKAAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|425454881|ref|ZP_18834606.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
gi|389804320|emb|CCI16779.1| putative guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Microcystis aeruginosa PCC 9807]
Length = 765
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 157/358 (43%), Positives = 218/358 (60%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D +
Sbjct: 48 DLICRAFNFAYKLHEGQYRKSGEPYIAHPIAVAGLLRDLGGDGAMIAAGFLHDVVEDTEV 107
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V +LVE V+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 108 TPEEIEDRFGVEVRNLVEAVTKLSKF-------NFSSKTERQAENFRRMFLAMAQDIRVI 160
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L ++QR + ET EIF PLANRLGI +K +LE+LCFK+L PD
Sbjct: 161 VVKLADRLHNMQTLEHLNPQQQQRISLETREIFAPLANRLGIGRFKWELEDLCFKYLEPD 220
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + S K ++ EA + + L + L++ I L L GR K LY I+ KM +
Sbjct: 221 AYRTVQLLVSEKRID--REARIETVTNTLREKLQEIGIKVLDLQGRPKHLYGIYHKMHNQ 278
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+DI +R+IVE +E+CY+ L +VH + +P + KDYI PK N YQSLHT V
Sbjct: 279 GKEFEQIYDIAAVRIIVETKEECYRCLAIVHDQFTPIPNRFKDYIGLPKANRYQSLHTTV 338
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQ 548
G PLEVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ
Sbjct: 339 VGLNARPLEVQIRTLEMHHVAEYGIAAHWKYKETGSSQTTLTAEDEKFAWLRNLLDWQ 396
>gi|30022482|ref|NP_834113.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218232359|ref|YP_002369216.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218899576|ref|YP_002447987.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228902935|ref|ZP_04067076.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|228910243|ref|ZP_04074061.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228941575|ref|ZP_04104123.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228960680|ref|ZP_04122324.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228967483|ref|ZP_04128511.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228974504|ref|ZP_04135071.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228981098|ref|ZP_04141399.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|229048116|ref|ZP_04193687.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|229111879|ref|ZP_04241425.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|229129687|ref|ZP_04258655.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|229146978|ref|ZP_04275340.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|229152610|ref|ZP_04280799.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|296504899|ref|YP_003666599.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|384188479|ref|YP_005574375.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|402564115|ref|YP_006606839.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|410676793|ref|YP_006929164.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|423358556|ref|ZP_17336059.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|423385906|ref|ZP_17363162.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|423527737|ref|ZP_17504182.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|423561125|ref|ZP_17537401.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|423585115|ref|ZP_17561202.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|423631131|ref|ZP_17606878.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|423640514|ref|ZP_17616132.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|423650270|ref|ZP_17625840.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|423657360|ref|ZP_17632659.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|434377574|ref|YP_006612218.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|452200870|ref|YP_007480951.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|29898040|gb|AAP11314.1| GTP pyrophosphokinase [Bacillus cereus ATCC 14579]
gi|218160316|gb|ACK60308.1| GTP diphosphokinase [Bacillus cereus B4264]
gi|218543265|gb|ACK95659.1| GTP diphosphokinase [Bacillus cereus G9842]
gi|228630871|gb|EEK87511.1| GTP pyrophosphokinase [Bacillus cereus m1550]
gi|228636475|gb|EEK92943.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST24]
gi|228653804|gb|EEL09674.1| GTP pyrophosphokinase [Bacillus cereus BDRD-Cer4]
gi|228671635|gb|EEL26933.1| GTP pyrophosphokinase [Bacillus cereus Rock1-15]
gi|228723219|gb|EEL74593.1| GTP pyrophosphokinase [Bacillus cereus AH676]
gi|228778639|gb|EEM26905.1| GTP pyrophosphokinase [Bacillus thuringiensis Bt407]
gi|228785221|gb|EEM33233.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228792198|gb|EEM39772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228798986|gb|EEM45959.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228818082|gb|EEM64159.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228849407|gb|EEM94243.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 200]
gi|228856719|gb|EEN01238.1| GTP pyrophosphokinase [Bacillus thuringiensis IBL 4222]
gi|296325951|gb|ADH08879.1| GTP pyrophosphokinase [Bacillus thuringiensis BMB171]
gi|326942188|gb|AEA18084.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar chinensis
CT-43]
gi|401084428|gb|EJP92674.1| GTP pyrophosphokinase [Bacillus cereus VD022]
gi|401202179|gb|EJR09041.1| GTP pyrophosphokinase [Bacillus cereus MSX-A1]
gi|401233758|gb|EJR40244.1| GTP pyrophosphokinase [Bacillus cereus VD045]
gi|401264498|gb|EJR70610.1| GTP pyrophosphokinase [Bacillus cereus VD154]
gi|401279575|gb|EJR85497.1| GTP pyrophosphokinase [Bacillus cereus VD166]
gi|401282688|gb|EJR88587.1| GTP pyrophosphokinase [Bacillus cereus VD169]
gi|401290103|gb|EJR95807.1| GTP pyrophosphokinase [Bacillus cereus VD200]
gi|401635962|gb|EJS53717.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-2]
gi|401792767|gb|AFQ18806.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-771]
gi|401876131|gb|AFQ28298.1| GTP pyrophosphokinase [Bacillus thuringiensis HD-789]
gi|402451400|gb|EJV83219.1| GTP pyrophosphokinase [Bacillus cereus HuB1-1]
gi|409175922|gb|AFV20227.1| GTP pyrophosphokinase RelA [Bacillus thuringiensis Bt407]
gi|452106263|gb|AGG03203.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 727
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|297206072|ref|ZP_06923467.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
gi|297149198|gb|EFH29496.1| GTP diphosphokinase [Lactobacillus jensenii JV-V16]
Length = 744
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 153/335 (45%), Positives = 211/335 (62%), Gaps = 14/335 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 87 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K +R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 141 KLADRLHNMHTLDHLRPDKHRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 200
Query: 379 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 201 YNIVNQMNSKRSER--EGYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 258 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G PLE+QIRT++MH AE+G AAHW YK+GD Q
Sbjct: 318 PGGKPLEIQIRTQQMHEVAEYGVAAHWAYKKGDTQ 352
>gi|229175081|ref|ZP_04302598.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|423457346|ref|ZP_17434143.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
gi|228608377|gb|EEK65682.1| GTP pyrophosphokinase [Bacillus cereus MM3]
gi|401147730|gb|EJQ55223.1| GTP pyrophosphokinase [Bacillus cereus BAG5X2-1]
Length = 727
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|379012030|ref|YP_005269842.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
gi|375302819|gb|AFA48953.1| GTP pyrophosphokinase RelA [Acetobacterium woodii DSM 1030]
Length = 723
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 222/355 (62%), Gaps = 13/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A+ AH+ Q R SG+ Y++H V A +LA + ++ + A +LHD ++D
Sbjct: 27 EMIYKAYNLAKEAHKDQKRLSGEDYVIHPVSVAYILAEMQMDTETIVAAILHDVIEDTIY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SYDYI F +A+LVEGV+K+ ++ ++E + +A+ L M LAM+ D R +L
Sbjct: 87 SYDYIKEEFNETIANLVEGVTKIGRIGFQSKEES------QAENLRKMILAMSKDIRVIL 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL DRLHNM TL+ + K+ AKETL+I+ PLANRLGIST K +LE+L K+L+PD
Sbjct: 141 IKLVDRLHNMRTLEYMRETKQIEKAKETLDIYAPLANRLGISTIKWELEDLALKYLDPDG 200
Query: 378 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + EA + I L + + +K + + GR K YSI+ KM + +
Sbjct: 201 YYDLVHKIKVKKSAREAYIADVIAVLAKEI-EKVGTHAEIYGRSKHFYSIYRKMKSQNRS 259
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R+IV++ +DCY L +VH W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 FDEIYDLIAVRVIVDSLKDCYGVLGIVHSQWTPIPGRFKDYIAMPKPNLYQSIHTTVMGP 319
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT+EMH AE+G AAHW+YKEG D + + + +QM W R +L Q
Sbjct: 320 KGEPFEIQIRTREMHETAEYGIAAHWKYKEGRMDAKDNKYEVQM-SWLRQMLELQ 373
>gi|239908231|ref|YP_002954972.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
gi|239798097|dbj|BAH77086.1| GTP pyrophosphokinase [Desulfovibrio magneticus RS-1]
Length = 740
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 165/421 (39%), Positives = 239/421 (56%), Gaps = 36/421 (8%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKAT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VAD+V+GV+K+S + +E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGEEVADIVDGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPHKQALIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIY 195
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L + DE + I L + L NI ++ GR K L+S+H KM + LT+
Sbjct: 196 AQLVEGVATHHTVDETFIERVIGHLNELLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTI 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++HD+ R+IVE +CY L +VH LW VPG+ KDYI+ PK N YQSLHT V G G
Sbjct: 255 DQVHDLVAFRVIVETIRECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPG 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+E+QIRT+EMH AE G AAHW+YKE + + + ++ +W R ++ WQ E +
Sbjct: 315 GERIEIQIRTEEMHRLAEEGVAAHWKYKERERGKFNPKDVERFQWLRQIMDWQRE-LKDS 373
Query: 556 RSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 615
R V N F D+ + + P K V+E P +T +D
Sbjct: 374 REFVTN-------LRFDLFQDEV-YVFTP----------------KGDVKELPEGATAVD 409
Query: 616 L 616
L
Sbjct: 410 L 410
>gi|228923159|ref|ZP_04086450.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423582615|ref|ZP_17558726.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|423634768|ref|ZP_17610421.1| GTP pyrophosphokinase [Bacillus cereus VD156]
gi|228836538|gb|EEM81888.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401213494|gb|EJR20235.1| GTP pyrophosphokinase [Bacillus cereus VD014]
gi|401278754|gb|EJR84684.1| GTP pyrophosphokinase [Bacillus cereus VD156]
Length = 727
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 159/378 (42%), Positives = 226/378 (59%), Gaps = 26/378 (6%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLV 414
K +LE+ ++LNP Q+ + + + E + E ++T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLEEVMTGIREKLDEVAIQPEIS--- 239
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+ K
Sbjct: 240 --GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFK 297
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV 534
DYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 298 DYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGT 357
Query: 535 LQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 358 LEKKLTWFRQILEWQNEA 375
>gi|408409949|ref|ZP_11181214.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
gi|407875894|emb|CCK83020.1| GTP pyrophosphokinase [Lactobacillus sp. 66c]
Length = 753
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/331 (45%), Positives = 208/331 (62%), Gaps = 10/331 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEY 200
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ S + E + AI+ L+ L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREGYIKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPG 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
PLE+QIRTKEMH AE+G AAHW YK G+
Sbjct: 320 GKPLEIQIRTKEMHEVAEYGVAAHWAYKRGN 350
>gi|49481489|ref|YP_038457.1| GTP diphosphokinase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|228987658|ref|ZP_04147772.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|49333045|gb|AAT63691.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus thuringiensis
serovar konkukian str. 97-27]
gi|228772118|gb|EEM20570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 727
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|47566596|ref|ZP_00237418.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118479564|ref|YP_896715.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|196034529|ref|ZP_03101938.1| GTP diphosphokinase [Bacillus cereus W]
gi|196039332|ref|ZP_03106638.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|196044908|ref|ZP_03112142.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|206975952|ref|ZP_03236862.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217961898|ref|YP_002340468.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218905602|ref|YP_002453436.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|222097852|ref|YP_002531909.1| gtp diphosphokinase (gtp pyrophosphokinase) [Bacillus cereus Q1]
gi|225866388|ref|YP_002751766.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228917043|ref|ZP_04080603.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228929452|ref|ZP_04092473.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228935727|ref|ZP_04098540.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228948121|ref|ZP_04110405.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229093478|ref|ZP_04224581.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|229123948|ref|ZP_04253140.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|229141146|ref|ZP_04269687.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|229158022|ref|ZP_04286093.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|229198534|ref|ZP_04325238.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|254724667|ref|ZP_05186450.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus anthracis
str. A1055]
gi|375286411|ref|YP_005106850.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|376268304|ref|YP_005121016.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|423354899|ref|ZP_17332524.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|423373632|ref|ZP_17350971.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|423549853|ref|ZP_17526180.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|423570646|ref|ZP_17546891.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|423573914|ref|ZP_17550033.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|423603933|ref|ZP_17579826.1| GTP pyrophosphokinase [Bacillus cereus VD102]
gi|47556626|gb|EAL14958.1| GTP pyrophosphokinase [Bacillus cereus G9241]
gi|118418789|gb|ABK87208.1| GTP diphosphokinase [Bacillus thuringiensis str. Al Hakam]
gi|195993071|gb|EDX57030.1| GTP diphosphokinase [Bacillus cereus W]
gi|196024396|gb|EDX63069.1| GTP diphosphokinase [Bacillus cereus 03BB108]
gi|196029959|gb|EDX68560.1| GTP diphosphokinase [Bacillus cereus NVH0597-99]
gi|206745704|gb|EDZ57101.1| GTP diphosphokinase [Bacillus cereus H3081.97]
gi|217066579|gb|ACJ80829.1| GTP diphosphokinase [Bacillus cereus AH187]
gi|218537532|gb|ACK89930.1| GTP diphosphokinase [Bacillus cereus AH820]
gi|221241910|gb|ACM14620.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus Q1]
gi|225788454|gb|ACO28671.1| GTP diphosphokinase [Bacillus cereus 03BB102]
gi|228585037|gb|EEK43151.1| GTP pyrophosphokinase [Bacillus cereus m1293]
gi|228625475|gb|EEK82231.1| GTP pyrophosphokinase [Bacillus cereus ATCC 4342]
gi|228642309|gb|EEK98599.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST26]
gi|228659250|gb|EEL14898.1| GTP pyrophosphokinase [Bacillus cereus 95/8201]
gi|228689949|gb|EEL43753.1| GTP pyrophosphokinase [Bacillus cereus Rock3-42]
gi|228811479|gb|EEM57816.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228823965|gb|EEM69784.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228830240|gb|EEM75856.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228842650|gb|EEM87738.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|358354938|dbj|BAL20110.1| GTP pyrophosphokinase [Bacillus cereus NC7401]
gi|364514104|gb|AEW57503.1| GTP pyrophosphokinase [Bacillus cereus F837/76]
gi|401085783|gb|EJP94019.1| GTP pyrophosphokinase [Bacillus cereus IS075]
gi|401095836|gb|EJQ03889.1| GTP pyrophosphokinase [Bacillus cereus AND1407]
gi|401189469|gb|EJQ96519.1| GTP pyrophosphokinase [Bacillus cereus ISP3191]
gi|401203557|gb|EJR10394.1| GTP pyrophosphokinase [Bacillus cereus MSX-A12]
gi|401212483|gb|EJR19226.1| GTP pyrophosphokinase [Bacillus cereus MSX-D12]
gi|401245619|gb|EJR51972.1| GTP pyrophosphokinase [Bacillus cereus VD102]
Length = 727
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|409351741|ref|ZP_11234324.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
gi|407876538|emb|CCK86382.1| GTP pyrophosphokinase [Lactobacillus equicursoris CIP 110162]
Length = 753
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/331 (45%), Positives = 208/331 (62%), Gaps = 10/331 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NPD++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYINPDEY 200
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ S + E + AI+ L+ L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREGYIKDAIDYLKGTLDSLGIDYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPG 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
PLE+QIRTKEMH AE+G AAHW YK G+
Sbjct: 320 GKPLEIQIRTKEMHEVAEYGVAAHWAYKRGN 350
>gi|229186646|ref|ZP_04313807.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
gi|228596905|gb|EEK54564.1| GTP pyrophosphokinase [Bacillus cereus BGSC 6E1]
Length = 727
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + + + E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|323142303|ref|ZP_08077135.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
gi|322413187|gb|EFY04074.1| GTP diphosphokinase [Phascolarctobacterium succinatutens YIT 12067]
Length = 754
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 155/375 (41%), Positives = 226/375 (60%), Gaps = 29/375 (7%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
+E+LA Q+ FV KA+ A +AH Q R SG+PY++H + +L + +
Sbjct: 26 EEYLAPEQVA-------FVRKAYELAAKAHAAQTRKSGEPYIIHPIGVVSILVGLQMDDK 78
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+AA LHD ++D DYI FG VA+LV+GV+KL ++ +++E+ + +
Sbjct: 79 TLAAAFLHDVVEDTDYKLDYIKEQFGTVVANLVDGVTKLGKIEYISKEDR------QIEN 132
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
MFLAMA D R VLIKLADRLHNM T+ +P+ K+Q ++ETLEI+ PLA+RLGI T
Sbjct: 133 YRKMFLAMARDIRVVLIKLADRLHNMRTMKYMPVHKQQSISRETLEIYAPLAHRLGIYTI 192
Query: 362 KVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 419
K +LE+L F+++ PD + +L K+ E M+ A+ L+ A++ I + GR
Sbjct: 193 KWELEDLAFRYMEPDIYYDLVEQVKIKRREREDMINEAMTTLKDAVEKAGIR-CEIQGRP 251
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K+ YSIH KML+ + EI+D+ +R++V+ +DCY L +VH +W +PG+ KDY+
Sbjct: 252 KNFYSIHKKMLRDHKQLSEIYDLLAIRVLVDTVKDCYGTLGIVHSMWRPIPGRFKDYVAV 311
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---------GDCQH 530
PK N YQSLHT V G PLE+QIRT EMH +E+G AAHWRYKE GD
Sbjct: 312 PKSNMYQSLHTTVLSNGGQPLEIQIRTFEMHRISEYGIAAHWRYKESGGSKPAAGGDKGF 371
Query: 531 S---SFVLQMVEWAR 542
S++ Q++EW +
Sbjct: 372 DAKLSWLRQLLEWHK 386
>gi|357054508|ref|ZP_09115592.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
gi|355384480|gb|EHG31545.1| hypothetical protein HMPREF9467_02564 [Clostridium clostridioforme
2_1_49FAA]
Length = 761
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 227/351 (64%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ +
Sbjct: 48 KAYRIADEAHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQ 107
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDL 222
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ D EA V +++++ ++D I V GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVALRKDTREAFVQEIVDEVKSHMEDAGIEATV-GGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQP 341
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 342 FEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAAGSAEAKLSWLRQILEWQ 392
>gi|52141100|ref|YP_085730.1| GTP diphosphokinase [Bacillus cereus E33L]
gi|51974569|gb|AAU16119.1| GTP diphosphokinase (GTP pyrophosphokinase) [Bacillus cereus E33L]
Length = 727
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|423512518|ref|ZP_17489049.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
gi|402449489|gb|EJV81326.1| GTP pyrophosphokinase [Bacillus cereus HuA2-1]
Length = 727
Score = 286 bits (732), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADGDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|442804848|ref|YP_007372997.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740698|gb|AGC68387.1| GTP pyrophosphokinase RelA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 759
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 229/360 (63%), Gaps = 13/360 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH GQ R+SG+P+++H ++ A +LA + ++ V AG+LHDT++D+ +
Sbjct: 55 LIEKAYKFACIAHEGQKRSSGEPFVIHPLQVAYILAEMEMDTATVVAGMLHDTVEDSSFT 114
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + FG +A+LV+GV+KL+++ T + ++A+ L MFLAM+ D R ++I
Sbjct: 115 YENTLKNFGEEIANLVDGVTKLAKIP------YTNKQEIQAENLRKMFLAMSKDIRVIII 168
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL P K+ A+ETL+I+ PLA+RLGI K +LE+L F++L+ ++
Sbjct: 169 KLADRLHNMRTLKYKPREKQIEIAQETLDIYAPLAHRLGIYKVKWELEDLSFRYLHEKEY 228
Query: 379 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLT 435
+L+ K+ + E IE + + + +K + + + GR K LYSI+ KM ++
Sbjct: 229 YDLAEKIAKKRKER--EEYIENIMKTVAEKAMEMGIEAHIDGRPKHLYSIYMKMKRQHKE 286
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R+IV +DCY L +VH+L+ +PG+ KDYI+ PK N YQSLHT V G
Sbjct: 287 LDQIYDLFAIRVIVNTVKDCYAVLGLVHELYKPMPGRFKDYISMPKPNMYQSLHTTVIGP 346
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+P EVQIRT EMH AE G AAHW+YKEG Q+ ++ W R +L WQ E D
Sbjct: 347 EGIPFEVQIRTWEMHRIAEVGIAAHWKYKEGGRQNDDLSEKLA-WLRQLLDWQKETTDPD 405
>gi|423478548|ref|ZP_17455263.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
gi|402427544|gb|EJV59650.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-1]
Length = 726
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|423400750|ref|ZP_17377923.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
gi|401653740|gb|EJS71283.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-2]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|237667442|ref|ZP_04527426.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237655790|gb|EEP53346.1| RelA/SpoT family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 737
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 153/365 (41%), Positives = 225/365 (61%), Gaps = 21/365 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A+ AH+ Q R SG+PY++H + A +LA +G ++ + AGLLHD ++D
Sbjct: 19 ELVKKAYNFAKEAHKDQKRESGEPYIIHPIAVAEILAELGMDTNTIVAGLLHDVIEDTDC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S++ R F VA+LV+GV+KL++L ++ + +AD + M LAMA D R ++
Sbjct: 79 SFEDASRMFNPEVANLVDGVTKLTKLGEMEYKTKEEQ---QADNVRKMLLAMAKDIRVII 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+LCF++L+ +
Sbjct: 136 IKLADRLHNMRTLKFMPANKQKNKAKETLDIYAPLAHRLGMSKIKWELEDLCFRYLHEKE 195
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L + E + + +V +KLE A D +I GR K YSI+ KM+
Sbjct: 196 YYDLVKDIAEKRVERESYIQDIVNDLYKKLEGAGIDSDID-----GRPKHFYSIYKKMVN 250
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K +++EI D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 251 KNKSIEEIFDLTAIRVLVNSVKDCYGVLGIVHTIYRPIPGRFKDYIAMPKPNMYQSLHTT 310
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE------WARWVL 545
V G E+QIRT EMH AE+G AAHW+YKEGD + V + E W R +L
Sbjct: 311 VIGPQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDTAGGTEVDKQKEFEKKLAWLRDML 370
Query: 546 TWQCE 550
WQ E
Sbjct: 371 EWQKE 375
>gi|423521737|ref|ZP_17498210.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
gi|401176399|gb|EJQ83594.1| GTP pyrophosphokinase [Bacillus cereus HuA4-10]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|423483983|ref|ZP_17460673.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
gi|401141534|gb|EJQ49089.1| GTP pyrophosphokinase [Bacillus cereus BAG6X1-2]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + + + E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKAAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|158335664|ref|YP_001516836.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
gi|158305905|gb|ABW27522.1| ppGpp 3'-pyrophosphohydrolase [Acaryochloris marina MBIC11017]
Length = 753
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 223/370 (60%), Gaps = 15/370 (4%)
Query: 189 AQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 248
A+ K I + + +AF + H GQ RASG+PY+ H V A LL +G ++ ++AAG
Sbjct: 28 AEDKDGIPEQTLICRAFNFGYQLHEGQRRASGEPYIAHPVSVAELLRDLGGSAAMIAAGF 87
Query: 249 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMF 307
LHD ++D ++ + I FG V LVEGV+KLS+ N ++KT EA+ MF
Sbjct: 88 LHDVVEDTDVTPETIEAEFGLEVRQLVEGVTKLSKF-------NFSTKTEREAENFRRMF 140
Query: 308 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 366
LAMA D R +++KLADRLHNM TL+ LP K++R A+ET ++F PLANRLGI +K +LE
Sbjct: 141 LAMAQDIRVIVVKLADRLHNMRTLEHLPPVKQRRIAQETRDVFAPLANRLGIWRFKWELE 200
Query: 367 NLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
+L FK+L PD + + + + E + AI L L+ L + GR K L+S
Sbjct: 201 DLAFKYLEPDTYRRMQQLVADKRTDREDHIEQAITILHDRLEPICSKHLEISGRPKHLFS 260
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I KM +++ EI+D+ +R+IV+ E+CY+AL VVH + +PG+ KDYI PK N
Sbjct: 261 ISQKMERQQKEFHEIYDVAAVRVIVKTNEECYRALAVVHDCFRPIPGRFKDYIGLPKSNR 320
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL----QMVEW 540
YQSLHTVV G G PLEVQIRT+ MH AE+G AAHW+YKE Q + W
Sbjct: 321 YQSLHTVVIGLGGRPLEVQIRTEAMHHIAEYGIAAHWKYKESSNQPGKAAWSPDDEKFTW 380
Query: 541 ARWVLTWQCE 550
R +L WQ +
Sbjct: 381 LRQLLEWQSD 390
>gi|163942157|ref|YP_001647041.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus weihenstephanensis KBAB4]
gi|229135230|ref|ZP_04264029.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|229169150|ref|ZP_04296865.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|423368453|ref|ZP_17345885.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|423489585|ref|ZP_17466267.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
gi|423495308|ref|ZP_17471952.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|423497898|ref|ZP_17474515.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|423519105|ref|ZP_17495586.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|423591601|ref|ZP_17567632.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|163864354|gb|ABY45413.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus weihenstephanensis
KBAB4]
gi|228614378|gb|EEK71488.1| GTP pyrophosphokinase [Bacillus cereus AH621]
gi|228648272|gb|EEL04308.1| GTP pyrophosphokinase [Bacillus cereus BDRD-ST196]
gi|401080780|gb|EJP89064.1| GTP pyrophosphokinase [Bacillus cereus VD142]
gi|401151401|gb|EJQ58853.1| GTP pyrophosphokinase [Bacillus cereus CER057]
gi|401160160|gb|EJQ67539.1| GTP pyrophosphokinase [Bacillus cereus HuA2-4]
gi|401161185|gb|EJQ68552.1| GTP pyrophosphokinase [Bacillus cereus CER074]
gi|401231734|gb|EJR38236.1| GTP pyrophosphokinase [Bacillus cereus VD048]
gi|402431821|gb|EJV63885.1| GTP pyrophosphokinase [Bacillus cereus BtB2-4]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADGDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKAAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|147677380|ref|YP_001211595.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
gi|146273477|dbj|BAF59226.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Pelotomaculum thermopropionicum SI]
Length = 765
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/351 (44%), Positives = 214/351 (60%), Gaps = 11/351 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V+ A+ A AHR Q R SG+P+++H +E A +LA + + + AGLLHD ++D ++
Sbjct: 59 VVAAYEFAANAHREQKRFSGEPFIVHPLEVAKILAELELDQETLVAGLLHDVVEDTGVTL 118
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I FG A LV+G +KLS++ ++E ++A+ L MFLAMA D R +LIK
Sbjct: 119 QDIREQFGVETALLVDGTTKLSRIEYKSKEE------LQAENLRKMFLAMAKDIRVILIK 172
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL P K+ A ETLEIF PLA+RLGI K +LE+L F+ PD++
Sbjct: 173 LADRLHNLRTLKYHPEPKQVEIANETLEIFAPLAHRLGIYRIKWELEDLSFRFKEPDRYF 232
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
EL +K+ D E + S I L L++ I + GR K YSI+ KM++++ ++
Sbjct: 233 ELVNKIASTRDKREEYIRSVISILAGKLEEVGIEAEI-QGRPKHFYSIYAKMIEQQKDLN 291
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI D+ +R +VE DCY L +VH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 292 EIFDVMAVRCLVETVRDCYATLGIVHTMWTPIPGRFKDYIAMPKSNMYQSLHTTVIGPQG 351
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT+EMH AE+G AAHWRYKEG F ++ W R +L WQ
Sbjct: 352 EPLEIQIRTREMHRTAEYGIAAHWRYKEGGRSDREFDKKLA-WLRQLLEWQ 401
>gi|18310920|ref|NP_562854.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
gi|18145602|dbj|BAB81644.1| GTP pyrophosphokinase [Clostridium perfringens str. 13]
Length = 726
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|434400053|ref|YP_007134057.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
gi|428271150|gb|AFZ37091.1| (p)ppGpp synthetase I, SpoT/RelA [Stanieria cyanosphaera PCC 7437]
Length = 745
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 162/380 (42%), Positives = 224/380 (58%), Gaps = 13/380 (3%)
Query: 175 EGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLL 234
E L + K+ L Q + + + + +AF A + H GQ R SG+PY+ H V A LL
Sbjct: 13 ELELPHWLKDCLIENQSQKSDEQTNLICRAFNFAYQLHEGQYRKSGEPYIAHPVAVAGLL 72
Query: 235 AAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTA 294
+G +S +AAG LHD ++D ++ + I FG V LVEGV+KLS+ N +
Sbjct: 73 RDLGGDSVTIAAGFLHDVVEDTEVTPEEIEERFGTDVRQLVEGVTKLSKF-------NFS 125
Query: 295 SKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPL 352
SKT +A+ MFL+MA D R +++KLADRLHNM TL+ L K+QR A ET EIF PL
Sbjct: 126 SKTERQAENFRRMFLSMAKDIRVIVVKLADRLHNMRTLEHLKPEKQQRIALETREIFAPL 185
Query: 353 ANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNI 410
ANRLGI +K +LE+L FK+L P+ + E+ + + E E + E + L+ +
Sbjct: 186 ANRLGIGRFKWELEDLSFKYLEPEAYREIQALVAERRTDRETRIDKVTEIIRSRLQKLGV 245
Query: 411 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 470
+ L GR K LY I+ KM +++ EI DI +R+IVE E+CY++L VVH + +P
Sbjct: 246 NVFELKGRPKHLYGIYQKMQRQQKEFHEIFDIAAVRIIVETNEECYRSLAVVHDAFKPIP 305
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH 530
G+ KDYI PK N YQSLHT V G PLE+QIRT EMH AE+G AAHW+YKE +
Sbjct: 306 GRFKDYIGLPKPNRYQSLHTTVVGLNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGSSN 365
Query: 531 SSFVL--QMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 366 TRLNSDDEKFTWLRQLLEWQ 385
>gi|407706935|ref|YP_006830520.1| hypothetical protein MC28_3699 [Bacillus thuringiensis MC28]
gi|423615251|ref|ZP_17591085.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|401260930|gb|EJR67097.1| GTP pyrophosphokinase [Bacillus cereus VD115]
gi|407384620|gb|AFU15121.1| GTP pyrophosphokinase [Bacillus thuringiensis MC28]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|229032057|ref|ZP_04188039.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
gi|228729249|gb|EEL80244.1| GTP pyrophosphokinase [Bacillus cereus AH1271]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|206969775|ref|ZP_03230729.1| GTP diphosphokinase [Bacillus cereus AH1134]
gi|206735463|gb|EDZ52631.1| GTP diphosphokinase [Bacillus cereus AH1134]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|403384230|ref|ZP_10926287.1| GTP pyrophosphokinase [Kurthia sp. JC30]
Length = 730
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 12/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
DFV +A+ A AH+ Q R+SG+PY++H V+ A +LA + + V+AG LHD ++D +
Sbjct: 26 DFVRRAYELAREAHKEQFRSSGEPYIVHPVQVAGILADLQMDPETVSAGFLHDVVEDTEV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA LV+GV+KL ++ ++ K +A+ MF+AMA D R +L
Sbjct: 86 TRDDLVEQFGEEVAMLVDGVTKLGKIKYKSK------KEQQAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + + ++++ L D +I L GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKRKRTEREAYLKNVMDEIHGQLGDVDIQ-AELSGRPKHIYSIYKKMQSQHKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAIRVLVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQC 549
PLEVQIRT EMH AE+G AAHW YKEG S + + W R +L +Q
Sbjct: 319 YGDPLEVQIRTNEMHNIAEYGVAAHWAYKEGKNAATEKSDIDSKLTWFREILEFQS 374
>gi|228954691|ref|ZP_04116714.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|229071915|ref|ZP_04205126.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|229081671|ref|ZP_04214166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|229180683|ref|ZP_04308023.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|365158800|ref|ZP_09354991.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|423411798|ref|ZP_17388918.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|423426539|ref|ZP_17403570.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|423432416|ref|ZP_17409420.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|423437851|ref|ZP_17414832.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|423502906|ref|ZP_17479498.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449091374|ref|YP_007423815.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228602828|gb|EEK60309.1| GTP pyrophosphokinase [Bacillus cereus 172560W]
gi|228701675|gb|EEL54166.1| GTP pyrophosphokinase [Bacillus cereus Rock4-2]
gi|228711211|gb|EEL63175.1| GTP pyrophosphokinase [Bacillus cereus F65185]
gi|228805018|gb|EEM51614.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|363626294|gb|EHL77285.1| GTP pyrophosphokinase [Bacillus sp. 7_6_55CFAA_CT2]
gi|401103866|gb|EJQ11843.1| GTP pyrophosphokinase [Bacillus cereus BAG3O-2]
gi|401111286|gb|EJQ19185.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-2]
gi|401117172|gb|EJQ25010.1| GTP pyrophosphokinase [Bacillus cereus BAG4O-1]
gi|401121006|gb|EJQ28802.1| GTP pyrophosphokinase [Bacillus cereus BAG4X12-1]
gi|402459127|gb|EJV90864.1| GTP pyrophosphokinase [Bacillus cereus HD73]
gi|449025131|gb|AGE80294.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|403668327|ref|ZP_10933602.1| GTP pyrophosphokinase [Kurthia sp. JC8E]
Length = 730
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 225/357 (63%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ A AH+ Q R+SG+PY++H ++ A +LA + + V+AG LHD ++D ++
Sbjct: 27 FVQRAYELARDAHKEQFRSSGEPYIVHPIQVAGILAELQMDPETVSAGFLHDVVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG VA LV+GV+KL ++ ++ K +A+ MF+AMA D R +LI
Sbjct: 87 REDLVEQFGEEVAMLVDGVTKLGKIKYKSK------KEQQAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R +KETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRISKETLEIFAPLAHRLGISAIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K EA + + ++++ + L D +I L GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKRKRTEREAYLQNVMDEITEQLDDVSIP-ADLSGRPKHIYSIYNKMQSQHKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRVIVDSIKDCYAVLGIVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPY 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRTK MH AEFG AAHW YKEG ++ + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTKSMHNIAEFGVAAHWAYKEGKSAVTENTDIDSKLTWFREILEFQNES 376
>gi|160936541|ref|ZP_02083908.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
gi|158440332|gb|EDP18077.1| hypothetical protein CLOBOL_01431 [Clostridium bolteae ATCC
BAA-613]
Length = 761
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 227/351 (64%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ +
Sbjct: 48 KAYRIADEAHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMTLEQ 107
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 108 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 162
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 163 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLQPDVYYDL 222
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ D EA V +++++ ++D I V GR K +SI+ KM+ + T+D+I
Sbjct: 223 VEKVALRKDTREAFVQEIVDEVKSHMEDAGIESTV-GGRVKHFFSIYKKMVNQNKTLDQI 281
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 282 YDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQP 341
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 342 FEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAAGSAEAKLSWLRQILEWQ 392
>gi|423395299|ref|ZP_17372500.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|423406174|ref|ZP_17383323.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
gi|401654710|gb|EJS72249.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-1]
gi|401660168|gb|EJS77650.1| GTP pyrophosphokinase [Bacillus cereus BAG2X1-3]
Length = 727
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|47529935|ref|YP_021284.1| GTP pyrophosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187297|ref|YP_030549.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|65321773|ref|ZP_00394732.1| COG0317: Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Bacillus anthracis str. A2012]
gi|165871974|ref|ZP_02216615.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167636486|ref|ZP_02394783.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|167640729|ref|ZP_02398989.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|170688669|ref|ZP_02879874.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|170709262|ref|ZP_02899682.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|177653959|ref|ZP_02936000.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190567043|ref|ZP_03019959.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227817185|ref|YP_002817194.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229602848|ref|YP_002868693.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|254684162|ref|ZP_05148022.1| GTP diphosphokinase [Bacillus anthracis str. CNEVA-9066]
gi|254736509|ref|ZP_05194215.1| GTP diphosphokinase [Bacillus anthracis str. Western North America
USA6153]
gi|254741547|ref|ZP_05199234.1| GTP diphosphokinase [Bacillus anthracis str. Kruger B]
gi|254751354|ref|ZP_05203391.1| GTP diphosphokinase [Bacillus anthracis str. Vollum]
gi|254757686|ref|ZP_05209713.1| GTP diphosphokinase [Bacillus anthracis str. Australia 94]
gi|386738296|ref|YP_006211477.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|421506659|ref|ZP_15953582.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|421638475|ref|ZP_16079071.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
gi|47505083|gb|AAT33759.1| GTP diphosphokinase [Bacillus anthracis str. 'Ames Ancestor']
gi|49181224|gb|AAT56600.1| GTP pyrophosphokinase [Bacillus anthracis str. Sterne]
gi|164712264|gb|EDR17800.1| GTP diphosphokinase [Bacillus anthracis str. A0488]
gi|167511301|gb|EDR86687.1| GTP diphosphokinase [Bacillus anthracis str. A0193]
gi|167528079|gb|EDR90876.1| GTP diphosphokinase [Bacillus anthracis str. A0442]
gi|170125838|gb|EDS94745.1| GTP diphosphokinase [Bacillus anthracis str. A0389]
gi|170667355|gb|EDT18113.1| GTP diphosphokinase [Bacillus anthracis str. A0465]
gi|172081014|gb|EDT66092.1| GTP diphosphokinase [Bacillus anthracis str. A0174]
gi|190562034|gb|EDV16003.1| GTP diphosphokinase [Bacillus anthracis str. Tsiankovskii-I]
gi|227006997|gb|ACP16740.1| GTP diphosphokinase [Bacillus anthracis str. CDC 684]
gi|229267256|gb|ACQ48893.1| GTP diphosphokinase [Bacillus anthracis str. A0248]
gi|384388148|gb|AFH85809.1| GTP pyrophosphokinase [Bacillus anthracis str. H9401]
gi|401823652|gb|EJT22799.1| GTP pyrophosphokinase [Bacillus anthracis str. UR-1]
gi|403394901|gb|EJY92141.1| GTP pyrophosphokinase [Bacillus anthracis str. BF1]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGVLVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|348174215|ref|ZP_08881109.1| GTP pyrophosphokinase [Saccharopolyspora spinosa NRRL 18395]
Length = 772
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 217/358 (60%), Gaps = 19/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + AGLLHDT++D S +
Sbjct: 68 RAYDVAEEKHSSQRRKSGDPYITHPLAVATILAELGMDTTTLVAGLLHDTVEDTDYSLEK 127
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V LV+GV+KL ++ A EA+ + M +AMA D R ++IKLA
Sbjct: 128 LGAEFGEEVGHLVDGVTKLDKVKLGA--------AAEAETIRKMIIAMARDPRVLVIKLA 179
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 180 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATIKWELEDLAFAILQPKKYDEI 239
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + + I +L L ++ V GR K YSIH KM+ + D+
Sbjct: 240 V-RLVANRAPSRDTYLRTVIHELSHQLDTARLAAKV-EGRPKHYYSIHQKMIVRGRDFDD 297
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G
Sbjct: 298 IHDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPEGK 357
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHWRYKE ++ S V VE W R +L WQ EA
Sbjct: 358 PLEVQIRTHEMHRTAEYGIAAHWRYKETKGRNGSGVQSAVEVDEMAWMRQLLDWQREA 415
>gi|153810165|ref|ZP_01962833.1| hypothetical protein RUMOBE_00546 [Ruminococcus obeum ATCC 29174]
gi|149833344|gb|EDM88425.1| RelA/SpoT family protein [Ruminococcus obeum ATCC 29174]
Length = 776
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/385 (40%), Positives = 240/385 (62%), Gaps = 15/385 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E +A+ + H + KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 42 EVLYEELIASVKKYHPSTDISMIQKAYEVAREAHKDQKRKSGEPYIIHPLCVAIILADLE 101
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 297
+ + AGLLHD ++D +++ + + + F A VA LV+GV+KL QLS +A K
Sbjct: 102 LDKETIVAGLLHDAVEDTWMTIEEVEKEFSAEVALLVDGVTKLGQLS------YSADKVE 155
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
++A+ L MFLAMA D R +LIKLADRLHNM TL + K+Q A+ET++I+ P+A RL
Sbjct: 156 LQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRL 215
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLV 414
GIS KV+L++L K+L PD + +L K L + + V + +++++Q + + +I V
Sbjct: 216 GISKIKVELDDLSLKYLKPDVYYDLVDKVALRKSERQEFVNNIVKQVKQHMDEASIKAQV 275
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
GR K +SI+ KM+ + T+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ K
Sbjct: 276 -DGRIKHFFSIYKKMVNQDKTIDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFK 334
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHS 531
DYI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE G
Sbjct: 335 DYIAMPKPNMYQSLHTTLIGPNGQPFEIQIRTFEMHKTAEYGIAAHWKYKESSDGKVPVD 394
Query: 532 SFVLQMVEWARWVLTWQCEAMSKDR 556
+ + W R +L WQ + MS +R
Sbjct: 395 KREEEKLNWLRQILEWQKD-MSDNR 418
>gi|152976825|ref|YP_001376342.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
gi|152025577|gb|ABS23347.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cytotoxicus NVH 391-98]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 219/361 (60%), Gaps = 20/361 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFSKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M TS EKL + +IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TSIQEKLNEVSIHPDIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
V G PLEVQIRTKEMH AE+G AAHW YKEG + + + + W R +L WQ E
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEYGIAAHWAYKEGKAAATGTLEKKLTWFRQILEWQNE 373
Query: 551 A 551
A
Sbjct: 374 A 374
>gi|33864375|ref|NP_895935.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [Prochlorococcus
marinus str. MIT 9313]
gi|33641155|emb|CAE22285.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9313]
Length = 776
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 212/347 (61%), Gaps = 11/347 (3%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RELVEGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
+L K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 194 GSLQADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRS 253
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + + +E L + L + + GR K LY I KM +++ EI D+ LR+I
Sbjct: 254 ERENRLANTVELLTERLASAGLDTCEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRII 313
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
+ E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G+ P+EVQIRT
Sbjct: 314 APSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGKHR-PIEVQIRTPG 372
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH +EFG AAHW YKEG ++ + W R ++ WQ E + D
Sbjct: 373 MHRVSEFGIAAHWEYKEGGSPAAANK-ERFNWLRQLVEWQQEGGNDD 418
>gi|148243334|ref|YP_001228491.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
gi|147851644|emb|CAK29138.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. RCC307]
Length = 773
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 160/361 (44%), Positives = 215/361 (59%), Gaps = 10/361 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF A + HR Q+RA+G+PY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 65 EGLLASAFDFAYQLHRQQVRATGEPYIIHPVAVADLLRDIGASAAVIAAGFLHDVVEDTD 124
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+S + I FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 125 VSLEEIEGHFGAEVRQLVEGVTKLGGI------HFTNRTEAQAENLRKMFLAMASDIRVV 178
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL K+QR A ET +I+ PLANRLGI +K +LE+L FK L PD
Sbjct: 179 LVKLADRLHNMRTLGALRPEKQQRIATETRDIYAPLANRLGIGRFKWELEDLAFKVLEPD 238
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+S ++ E + ++ L L++ + + GR K LY I KM +++
Sbjct: 239 DFRSISQQVASKRSDREERLGVTVQLLRDRLENSGVHECEVVGRPKHLYGIWSKMQRQEK 298
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ +R++ + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 299 EFHEIFDVAAVRIVAPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 358
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT EMH AE+G AAHW+YKEG + W R ++ WQ E +
Sbjct: 359 RHR-PIEVQIRTGEMHEVAEYGIAAHWKYKEGGSPADGDEMARFNWLRQLVDWQKEEGGQ 417
Query: 555 D 555
D
Sbjct: 418 D 418
>gi|42783537|ref|NP_980784.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|384182226|ref|YP_005567988.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|402555460|ref|YP_006596731.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
gi|42739466|gb|AAS43392.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10987]
gi|324328310|gb|ADY23570.1| GTP pyrophosphokinase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|401796670|gb|AFQ10529.1| GTP pyrophosphokinase [Bacillus cereus FRI-35]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 156/361 (43%), Positives = 219/361 (60%), Gaps = 19/361 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ + + + E + E ++T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLEEVMTGIREKLDEVAIQPEIS-----GRPKHIYSIYRKMAL 254
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 255 QNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHTT 314
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCE 550
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ E
Sbjct: 315 VIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETAGTLEKKLTWFRQILEWQNE 374
Query: 551 A 551
A
Sbjct: 375 A 375
>gi|374313164|ref|YP_005059594.1| (p)ppGpp synthetase I SpoT/RelA [Granulicella mallensis MP5ACTX8]
gi|358755174|gb|AEU38564.1| (p)ppGpp synthetase I, SpoT/RelA [Granulicella mallensis MP5ACTX8]
Length = 832
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/342 (43%), Positives = 222/342 (64%), Gaps = 11/342 (3%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H Q RASG+PY++H +E A +LA + +ST +AAGLLHD ++D ++ + I + FG V
Sbjct: 128 HATQKRASGEPYVIHPLEVAQVLAELKMDSTAIAAGLLHDAVEDTDVTPEEIAKRFGEQV 187
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
A +VEGV+KL ++ RE++ +A+ + M LAM D R V+IKLADRLHNM TL
Sbjct: 188 AHIVEGVTKLDKIKFANREDH------QAENIRKMLLAMVTDVRVVIIKLADRLHNMRTL 241
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VEC 388
+ L K+QR A+ETLEI+ PLA+RLG+ + +LE+L F++ +P Q+T+L++++ +
Sbjct: 242 EHLKPEKQQRIARETLEIYAPLAHRLGMGKLRGELEDLAFRYTDPFQYTQLTTEVDSLRG 301
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
EA + + LE L++ NI+ V R K LYSI K+ ++ +D+++D++ +R+I
Sbjct: 302 EGEAFLHRIVSTLEAKLREANINARVES-RIKRLYSIQQKLTAHQIPVDQVYDLFAIRVI 360
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
+ E+DCY AL ++H W VPG+ KD+I P+ N YQSLHT + EG EVQIRT++
Sbjct: 361 TQTEQDCYAALGLLHSTWRPVPGRFKDFIAMPRPNMYQSLHTTLIAEGAHQFEVQIRTED 420
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
MH AE G AAHW+YK D S+ Q + W R ++ WQ E
Sbjct: 421 MHQVAEEGIAAHWKYKASD-NVSAADEQRLAWVRQLMEWQRE 461
>gi|229013624|ref|ZP_04170755.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|423598283|ref|ZP_17574283.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|423660754|ref|ZP_17635923.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|423669987|ref|ZP_17645016.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|423673809|ref|ZP_17648748.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
gi|228747683|gb|EEL97555.1| GTP pyrophosphokinase [Bacillus mycoides DSM 2048]
gi|401236553|gb|EJR43010.1| GTP pyrophosphokinase [Bacillus cereus VD078]
gi|401299114|gb|EJS04714.1| GTP pyrophosphokinase [Bacillus cereus VDM034]
gi|401300795|gb|EJS06384.1| GTP pyrophosphokinase [Bacillus cereus VDM022]
gi|401310175|gb|EJS15500.1| GTP pyrophosphokinase [Bacillus cereus VDM062]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKAAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|336437345|ref|ZP_08617051.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336005471|gb|EGN35516.1| hypothetical protein HMPREF0988_02636 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 767
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 231/364 (63%), Gaps = 16/364 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH GQ+R SG+PY++H + ++LA + + + AG+LHD ++D ++
Sbjct: 53 LIEKAYKTANEAHNGQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMT 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R FG VA LV+GV+KL QLS + ++A+ L MFLAMA D R ++I
Sbjct: 113 LDDVSREFGEEVALLVDGVTKLGQLS-----YSQDKLEIQAENLRKMFLAMAKDIRVIII 167
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ + K++ AKET++I+ P+A RLGIS K++L++L K+ P+ +
Sbjct: 168 KLADRLHNMRTLEFMRPEKQKEKAKETMDIYAPIAQRLGISKIKIELDDLSLKYSQPEVY 227
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L L E E V + ++ +K+ +I V GR K +SI+ KM+ + T+
Sbjct: 228 QQLVHDLNERKTKREEFVQQIVSEVSTHMKNAHIQAKVY-GRVKHFFSIYKKMVNQNKTL 286
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 287 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPS 346
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQCEAM 552
P E+QIRT+EMH AE+G AAHW+YKEG ++ V+Q E W R +L WQ + M
Sbjct: 347 GQPFEIQIRTEEMHKTAEYGIAAHWKYKEGG--DAAKVVQAQEEKLNWLRQILEWQRD-M 403
Query: 553 SKDR 556
S +R
Sbjct: 404 SDNR 407
>gi|187932883|ref|YP_001885230.1| GTP pyrophosphokinase [Clostridium botulinum B str. Eklund 17B]
gi|187721036|gb|ACD22257.1| RelA/SpoT family protein [Clostridium botulinum B str. Eklund 17B]
Length = 728
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 150/363 (41%), Positives = 226/363 (62%), Gaps = 21/363 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA++ AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYFFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMPKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYKLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTT 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL---QMVEWARWVLTWQ 548
V G E+QIRT EMH AE+G AAHW+YKEGD V + + W R +L WQ
Sbjct: 308 VIGNQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDKNEEDKVKDFEKKLVWLRDMLEWQ 367
Query: 549 CEA 551
E
Sbjct: 368 KET 370
>gi|239624473|ref|ZP_04667504.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47_FAA]
gi|239520859|gb|EEQ60725.1| (p)ppGpp synthetase I [Clostridiales bacterium 1_7_47FAA]
Length = 765
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 148/351 (42%), Positives = 227/351 (64%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++ D
Sbjct: 52 KAYRIANEAHKEQKRKSGEPYIIHPLCVAIVLADLEMDKETIAAGLLHDVVEDTIMTLDQ 111
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++IKLA
Sbjct: 112 LTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIIIKLA 166
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L PD + +L
Sbjct: 167 DRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPDVYYDL 226
Query: 382 SSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K L + EA V +++++ +K+ + V GR K +SI+ KM+ + T+D+I
Sbjct: 227 VEKVDLRKDAREAFVQEIVDEVKNHMKEAGVDATV-GGRVKHFFSIYKKMVNQNKTLDQI 285
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R++V+N +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 286 YDLFAVRIMVDNVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSNGQP 345
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM-VEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 346 FEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVAAGSEEAKLSWLRQILEWQ 396
>gi|229062102|ref|ZP_04199427.1| GTP pyrophosphokinase [Bacillus cereus AH603]
gi|228717254|gb|EEL68929.1| GTP pyrophosphokinase [Bacillus cereus AH603]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADGDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + + + E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|229076038|ref|ZP_04209009.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|229098881|ref|ZP_04229817.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|229105045|ref|ZP_04235697.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|229117906|ref|ZP_04247268.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|423377736|ref|ZP_17355020.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|423440844|ref|ZP_17417750.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|423448988|ref|ZP_17425867.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|423463908|ref|ZP_17440676.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|423533272|ref|ZP_17509690.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
gi|423541473|ref|ZP_17517864.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|423547709|ref|ZP_17524067.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|423622506|ref|ZP_17598284.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|228665563|gb|EEL21043.1| GTP pyrophosphokinase [Bacillus cereus Rock1-3]
gi|228678355|gb|EEL32580.1| GTP pyrophosphokinase [Bacillus cereus Rock3-28]
gi|228684554|gb|EEL38496.1| GTP pyrophosphokinase [Bacillus cereus Rock3-29]
gi|228707072|gb|EEL59274.1| GTP pyrophosphokinase [Bacillus cereus Rock4-18]
gi|401129582|gb|EJQ37265.1| GTP pyrophosphokinase [Bacillus cereus BAG5O-1]
gi|401172661|gb|EJQ79882.1| GTP pyrophosphokinase [Bacillus cereus HuB4-10]
gi|401179430|gb|EJQ86603.1| GTP pyrophosphokinase [Bacillus cereus HuB5-5]
gi|401260626|gb|EJR66794.1| GTP pyrophosphokinase [Bacillus cereus VD148]
gi|401636002|gb|EJS53756.1| GTP pyrophosphokinase [Bacillus cereus BAG1O-2]
gi|402417505|gb|EJV49805.1| GTP pyrophosphokinase [Bacillus cereus BAG4X2-1]
gi|402420175|gb|EJV52446.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-1]
gi|402463491|gb|EJV95191.1| GTP pyrophosphokinase [Bacillus cereus HuB2-9]
Length = 727
Score = 286 bits (731), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 218/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|427418396|ref|ZP_18908579.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
gi|425761109|gb|EKV01962.1| (p)ppGpp synthetase, RelA/SpoT family [Leptolyngbya sp. PCC 7375]
Length = 763
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/356 (44%), Positives = 222/356 (62%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V +AF A + H+GQMRASG+PY+ H V A +L ++G +S ++AAG LHD ++D +S
Sbjct: 48 LVCRAFEFAYQLHKGQMRASGEPYIAHPVAVANILRSLGGDSAMIAAGFLHDVVEDTDVS 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA V +VEGV+KLS+ + N+ ++ +A+ MFLAMA D R +++
Sbjct: 108 ADEIEAHFGAEVRQMVEGVTKLSKF-----QFNSKTER-QAENFRRMFLAMAQDIRVIVV 161
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K+ + A ET+EIF PLANRLGI K +LE+L FK+L +
Sbjct: 162 KLADRLHNMRTLQHLPPEKQVQKACETIEIFAPLANRLGIGRMKWELEDLSFKYLEESSY 221
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + E EA + E LE L + I+ + + R K LYSI+ KM ++K
Sbjct: 222 QEIKNLISEKRVDREARLKQVAELLETHLTNDGINCVEISSRPKHLYSIYRKMQRQKKDF 281
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+DI +R+IV + +CY+AL VVH + +PG+ KDYI PK N YQSLHT V GE
Sbjct: 282 HQIYDIAAVRIIVSTKVECYRALAVVHDQFKPIPGRFKDYIGLPKANRYQSLHTAVIGEQ 341
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE ++ + W R +L WQ +
Sbjct: 342 GRPIEVQIRTMEMHHVAEYGIAAHWKYKETGNSNTKVNAEDEKFTWLRQLLEWQSD 397
>gi|296132724|ref|YP_003639971.1| (p)ppGpp synthetase I SpoT/RelA [Thermincola potens JR]
gi|296031302|gb|ADG82070.1| (p)ppGpp synthetase I, SpoT/RelA [Thermincola potens JR]
Length = 722
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/358 (44%), Positives = 217/358 (60%), Gaps = 18/358 (5%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E F+ + + AE+AH GQ R SG+PY++H + A +LA + + +AAGLLHD ++D
Sbjct: 19 EKFIEETYRFAEKAHEGQTRISGEPYIIHPLSVAHILADLELDVVTIAAGLLHDVVEDTD 78
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ I FG +A LV+GV+KLS++S N + VE L MFLAMA D R +
Sbjct: 79 SPLETIEEKFGVEIALLVDGVTKLSRISY----KNKMEQQVE--NLRKMFLAMAKDIRVI 132
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL L K++ ++ETLEIF PLA+RLGI K +LE+L ++L P
Sbjct: 133 LIKLADRLHNMRTLKHLAEPKQKEISEETLEIFAPLAHRLGIFKIKWELEDLALRYLEPK 192
Query: 377 QHTELSSKLVECFDE-----AMVTSAI-EKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
++ EL + + E A VT + EKLE +I GR K YSI+ KML
Sbjct: 193 KYYELVDGIAQKRAEREEYIARVTQILAEKLENVGIKADIQ-----GRPKHFYSIYKKML 247
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+++ + EI+D+ +R+IV+ +DCY AL ++H LW +PG+ KDYI PK N YQSLHT
Sbjct: 248 EQQKELAEIYDLLAVRVIVDTVKDCYGALGIIHTLWKPIPGRFKDYIAMPKSNMYQSLHT 307
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
V G P E+QIRT EMH AE+G AAHWRYKEG + + W R +L WQ
Sbjct: 308 TVIGPNGEPFEIQIRTWEMHRTAEYGIAAHWRYKEGGGRGDEEFENKLAWLRQLLEWQ 365
>gi|220929370|ref|YP_002506279.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulolyticum H10]
gi|219999698|gb|ACL76299.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulolyticum H10]
Length = 726
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 219/349 (62%), Gaps = 10/349 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ ++ AH GQ R SG+PY++H +E A++LA + + T + A LLHDT++D +YD
Sbjct: 26 KAYVVSKTAHMGQQRISGEPYIIHPLEVAVILAEMELDCTALIAALLHDTIEDTTCTYDE 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMSEGKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ EA +T IE L + + I + GR K YSI+ KM+K+ T+++I
Sbjct: 200 VEKINTKRKQREAYITKIIETLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQI 259
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ R+IV + +DCY L +VH+L+ + G+ KDYI PK N YQSLHT + G G P
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMSGRFKDYIAMPKPNMYQSLHTTLIGPGGQP 319
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
EVQIRT +MH AE G AAHW+YKEG ++ + W R +L WQ
Sbjct: 320 FEVQIRTWDMHRVAEVGIAAHWKYKEG-INNTKDSDKKFAWLRQLLEWQ 367
>gi|110802270|ref|YP_699214.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
gi|110682771|gb|ABG86141.1| GTP pyrophosphokinase [Clostridium perfringens SM101]
Length = 726
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|169343681|ref|ZP_02864680.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
gi|169298241|gb|EDS80331.1| GTP pyrophosphokinase [Clostridium perfringens C str. JGS1495]
Length = 726
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 227/361 (62%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY+ H + AM+LA +G ++ + AGLLHD ++D
Sbjct: 19 DLVKKAYDLAFEAHKEQKRESGEPYITHPISVAMILADMGMDTNTIVAGLLHDVIEDTDY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F VA+LV+GV+KL ++ ++E +AD + M LAMA D R ++
Sbjct: 79 TYEDISNIFNVEVANLVDGVTKLGKIKYKSKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+++ A+ETL+IF PLA+RLGIS K +LE+LC ++++P++
Sbjct: 133 IKLADRLHNMRTLKYMKPEKQKKKAQETLDIFAPLAHRLGISKIKWELEDLCLRYIHPEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E E ++ I++L++ L NI + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVNMIAEKRVEREKFISRIIKELKENLDKANIDSDI-EGRPKHFYSIYRKMVNKHKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYAVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGS 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YK G D + +F ++ W R +L WQ EA
Sbjct: 312 EGKTFEIQIRTFEMHRTAEYGIAAHWKYKSGINGTDSKDMTFENKLT-WLRDILEWQKEA 370
Query: 552 M 552
+
Sbjct: 371 V 371
>gi|148265188|ref|YP_001231894.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter uraniireducens Rf4]
gi|146398688|gb|ABQ27321.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter uraniireducens Rf4]
Length = 716
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 221/355 (62%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGILADLKLDVPTVVTGLLHDTVEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TLEELEGMFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQI 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+SK+ + E + V ++ +++ L D I+ V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVTKKKKERESYVDEVMQIIKEKLADHGITGEV-SGRSKHLYSIYRKMQSRSVD 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ +R++VE+ +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 IDEIYDLVAIRVMVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 YGERMEVQIRTGEMHRVAEAGIAAHWKYKEGKGYDEKEVKRFT-WLRQLLEWQQE 367
>gi|331697364|ref|YP_004333603.1| (p)ppGpp synthetase I SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
gi|326952053|gb|AEA25750.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia dioxanivorans
CB1190]
Length = 821
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 223/357 (62%), Gaps = 18/357 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 114 RAYDVAEAKHAHQKRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLER 173
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E TA+ EA+ + M +AMA D R ++IKL+
Sbjct: 174 LRTDFGDEVAHLVDGVTKLDKV-----EFGTAA---EAETIRKMVVAMARDPRVLVIKLS 225
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 226 DRLHNMRTMRFLPPEKQAKKARETLEVMAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 285
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + I+++ Q L+ I+ V GR K YSI+ KM+ K D+
Sbjct: 286 V-RLVATRAPSRDTYLKQVIDEVMQQLEGARITATV-EGRPKHYYSIYRKMIVKGRDFDD 343
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++V+ DCY A+ +VH LW +PG+ KDYI +P+F YQSLHT V G
Sbjct: 344 IHDLVGVRVLVDEVRDCYAAMGMVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGK 403
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV----LQMVEWARWVLTWQCEA 551
PLEVQIRT+EMH AEFG AAHWRYKE H++ + + W R +L WQ EA
Sbjct: 404 PLEVQIRTREMHRTAEFGIAAHWRYKESRGSHAATAGTVEIDEMSWMRQLLDWQREA 460
>gi|289523398|ref|ZP_06440252.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503090|gb|EFD24254.1| GTP diphosphokinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 764
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 215/355 (60%), Gaps = 17/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A H+ Q RA+G+PY++H + A +L+ + + + A LLHD ++D +++
Sbjct: 75 EAFVYAANKHKNQKRATGEPYVVHVLSVAGILSDVNIDVETLVAALLHDVIEDTDSTFEE 134
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARAVLI 318
+ FG VA LV+GV+KL N KTVE A+ L MFL MA D R VLI
Sbjct: 135 VKAKFGTNVAVLVDGVTKLG---------NIDFKTVEDYQAENLRKMFLVMAKDIRVVLI 185
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T+ L K+ R A+ETLEI+ PLA+RLGI K +LE+L FK L PD +
Sbjct: 186 KLADRLHNMRTIQVLRREKQLRIARETLEIYAPLAHRLGIYHMKRELEDLAFKVLEPDMY 245
Query: 379 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ ++ + EA++ AI+ L + L + I + GR K YSI+ KM +K LT+
Sbjct: 246 YEIRRRVRKKLPEREAIIKEAIDALSKKLDEGGIRAFI-TGRAKHFYSIYEKMKRKNLTI 304
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
++++D+ LR+I + DCYQ L +VH +W +PG+ DYI PK N YQSLHT V G
Sbjct: 305 EQMYDLLALRVITNSVVDCYQVLGIVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVVGPS 364
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHWRYKEG + ++ W R VL Q ++
Sbjct: 365 GEPLEVQIRTWDMHWIAEYGIAAHWRYKEGQIKPDDLDTKLT-WIRQVLETQLDS 418
>gi|229025869|ref|ZP_04182265.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|423389281|ref|ZP_17366507.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
gi|423417674|ref|ZP_17394763.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|228735421|gb|EEL86020.1| GTP pyrophosphokinase [Bacillus cereus AH1272]
gi|401106845|gb|EJQ14802.1| GTP pyrophosphokinase [Bacillus cereus BAG3X2-1]
gi|401641372|gb|EJS59089.1| GTP pyrophosphokinase [Bacillus cereus BAG1X1-3]
Length = 727
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|260589630|ref|ZP_05855543.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
gi|260539870|gb|EEX20439.1| GTP diphosphokinase [Blautia hansenii DSM 20583]
Length = 769
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/382 (40%), Positives = 229/382 (59%), Gaps = 23/382 (6%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E + + + H + KAF A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 34 EVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILADLE 93
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 297
+ + AGLLHD ++D ++ + I F A V LV+GV+KL QL N +A K
Sbjct: 94 LDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLVDGVTKLGQL------NYSADKVE 147
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
V+A+ L MFLAMA D R +LIKLADRLHNM TL +P K++ A+ET++I+ P+A RL
Sbjct: 148 VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIAQRL 207
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSKL------VECFDEAMVTSAIEKLEQALKDKNI 410
GIS K++L++L K+L P+ + +L K+ + F + +V +E+A + I
Sbjct: 208 GISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQAFIDQIVGDVRAHIEKASINAQI 267
Query: 411 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 470
GR K +SI+ KM+ + T+D+I+D++ +R+IV+ DCY AL ++H+++ +P
Sbjct: 268 D-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVRDCYAALGIIHEMYKPIP 322
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH 530
G+ KDYI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE
Sbjct: 323 GRFKDYIAMPKPNMYQSLHTTLIGPSGQPFEIQIRTFEMHRTAEYGIAAHWKYKEVSNNG 382
Query: 531 SSFVLQMVE----WARWVLTWQ 548
V Q E W R +L WQ
Sbjct: 383 KVSVTQSEEEKMSWLRQILEWQ 404
>gi|88809826|ref|ZP_01125332.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
gi|88786210|gb|EAR17371.1| metal dependent phosphohydrolase [Synechococcus sp. WH 7805]
Length = 777
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/347 (45%), Positives = 209/347 (60%), Gaps = 10/347 (2%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D ++ + + FG V
Sbjct: 80 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDVTPEQLESHFGPEV 139
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
LVEGV+KL L + T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 140 RGLVEGVTKLGGL------HFTNRTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 193
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 194 GALREEKRQRIARETREIYAPLANRLGIGRFKWELEDLSFKLLEPEAFREMQQEVATKRS 253
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + ++ L L + + GR K LY I KM +++ EI+D+ LR++
Sbjct: 254 EREERLGVTVQLLRDRLAAAGLENCDVNGRPKHLYGIWTKMQRQQKAFHEIYDVAALRIL 313
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
+ E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G P+EVQIRT E
Sbjct: 314 TPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIGRHR-PIEVQIRTLE 372
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH +EFG AAHW+YKEG + + W R ++ WQ E S D
Sbjct: 373 MHQVSEFGIAAHWKYKEGGSPAAGGDTERFNWLRQLVDWQQEGGSDD 419
>gi|254432294|ref|ZP_05045997.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
gi|197626747|gb|EDY39306.1| RelA/SpoT family protein [Cyanobium sp. PCC 7001]
Length = 826
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 160/362 (44%), Positives = 220/362 (60%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF A + H GQ RASG+PY++H V A LL IGA+++V+AAG LHD ++D
Sbjct: 110 EALLASAFDFAYQLHEGQYRASGEPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTE 169
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D + + FGA V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 170 VTPDELEQHFGAEVRALVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVV 223
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL K+ R A+ET EI+ PLANRLGI K +LE+L FK L P+
Sbjct: 224 LVKLADRLHNMRTLAALKPEKQLRIARETREIYAPLANRLGIGRLKWELEDLAFKILEPE 283
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ ++ C E + ++ L + L +S + GR K LY I KM +++
Sbjct: 284 AYRDVQQQVATKRCEREERLGVTVQLLRERLAAVGLSACEVSGRPKHLYGIWSKMQRQQK 343
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+I + + CY++L VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 344 AFHEIYDVAALRIICPSLDGCYRSLAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 403
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AE+G AAHW+YKEG + + W R ++ WQ + S
Sbjct: 404 RHR-PIEVQIRTPEMHQVAEYGIAAHWKYKEGGSPAAVGNDAERFNWLRQLVDWQKDGGS 462
Query: 554 KD 555
+D
Sbjct: 463 QD 464
>gi|331083062|ref|ZP_08332179.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330405064|gb|EGG84601.1| hypothetical protein HMPREF0992_01103 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 769
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 155/382 (40%), Positives = 229/382 (59%), Gaps = 23/382 (6%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E + + + H + KAF A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 34 EVLYQELITSVRKYHPSTDISMIDKAFQIANNAHKGQVRKSGEPYIIHPLCVAIILADLE 93
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT- 297
+ + AGLLHD ++D ++ + I F A V LV+GV+KL QL N +A K
Sbjct: 94 LDKETIVAGLLHDVVEDTVMTSEEIREEFNAEVELLVDGVTKLGQL------NYSADKVE 147
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
V+A+ L MFLAMA D R +LIKLADRLHNM TL +P K++ A+ET++I+ P+A RL
Sbjct: 148 VQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMPPHKQKEKARETMDIYAPIAQRL 207
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSKL------VECFDEAMVTSAIEKLEQALKDKNI 410
GIS K++L++L K+L P+ + +L K+ + F + +V +E+A + I
Sbjct: 208 GISKVKIELDDLSLKYLKPEVYYDLVEKINLKKSERQAFIDQIVGDVRAHIEKASINAQI 267
Query: 411 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 470
GR K +SI+ KM+ + T+D+I+D++ +R+IV+ DCY AL ++H+++ +P
Sbjct: 268 D-----GRIKHFFSIYKKMVNQDKTIDQIYDLFAVRIIVDTVRDCYAALGIIHEMYKPIP 322
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH 530
G+ KDYI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE
Sbjct: 323 GRFKDYIAMPKPNMYQSLHTTLIGPSGQPFEIQIRTFEMHRTAEYGIAAHWKYKEVSNNG 382
Query: 531 SSFVLQMVE----WARWVLTWQ 548
V Q E W R +L WQ
Sbjct: 383 KVSVTQSEEEKMSWLRQILEWQ 404
>gi|423452296|ref|ZP_17429149.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|423470622|ref|ZP_17447366.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
gi|401139934|gb|EJQ47491.1| GTP pyrophosphokinase [Bacillus cereus BAG5X1-1]
gi|402436288|gb|EJV68320.1| GTP pyrophosphokinase [Bacillus cereus BAG6O-2]
Length = 727
Score = 285 bits (730), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + + + E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKAAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|282899912|ref|ZP_06307873.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
gi|281195182|gb|EFA70118.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Cylindrospermopsis raciborskii CS-505]
Length = 756
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 216/357 (60%), Gaps = 11/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + A A H GQ R SG+PY+ H + A LL +G ++T++AAG LHD ++D +
Sbjct: 41 NLICSALKFAYELHEGQYRKSGEPYIAHPIAVADLLRDLGCSATMIAAGFLHDVVEDTEV 100
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FG V LVEGV+KLS++ N T+ +A+ MFL+MA D R ++
Sbjct: 101 TIEDIEQKFGHEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIV 154
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 155 VKLADRLHNMRTLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDA 214
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + E E + A E L + ++ I L + GR K LYSI+ KM +++
Sbjct: 215 YREIQEHVAEKRTAREEKLNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKE 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 FHEIYDLAALRIIVETNEECYRALAVVHDAFCPIPGRFKDYIGLPKPNRYQSLHTCVIGL 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE G + + W R +L WQ +
Sbjct: 335 TGRPLEVQIRTMEMHHVAEYGIAAHWKYKETGGSTAQVTGTDEKFAWLRQLLDWQSD 391
>gi|374307479|ref|YP_005053910.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
gi|291166507|gb|EFE28553.1| GTP diphosphokinase [Filifactor alocis ATCC 35896]
Length = 733
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 220/358 (61%), Gaps = 13/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A H+ Q R SG+ Y++H VE A +LA + + +AAGLLHD L+D ++
Sbjct: 20 IVEKAYLHAYEGHKNQYRKSGEKYIIHPVEVAKILAELEMDMDTIAAGLLHDVLEDTDMT 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + FG +ADLV+GV+KL Q+ +++ ++A+ MF AM D R VLI
Sbjct: 80 YEEMASEFGTTIADLVDGVTKLGQIKYQSKQE------MQAENFRKMFFAMGKDIRVVLI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T+ +P K +KET EI+ P+ANRLGI K ++E+L ++L+PD +
Sbjct: 134 KLADRLHNMRTMKYMPKEKAIEKSKETAEIYAPIANRLGIFRIKWEMEDLALRYLDPDGY 193
Query: 379 TELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL+ K L E + S IE++E L++ +I+ + GR K YSI+ KM + T
Sbjct: 194 RELTEKVSLKRQEREKYIESVIEQIEVKLEENDIT-CDIKGRAKHFYSIYKKMKYQDKTF 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV+N +DCY A+ +VH +W +P + KDYI PK N YQSLHT V G
Sbjct: 253 EEIYDLMAVRIIVDNIKDCYGAVGLVHTIWKPIPTRFKDYIAMPKPNMYQSLHTTVVGPD 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 551
PLE+QIRT +M+ AEFG AAHW+YKE + + + + W R ++ WQ E
Sbjct: 313 GEPLEIQIRTWDMNRIAEFGIAAHWKYKERFSANGNSDGEMEKKLSWIRQMMEWQKEV 370
>gi|403744544|ref|ZP_10953770.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403122078|gb|EJY56326.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 725
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 219/354 (61%), Gaps = 11/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V +A+ A RAH GQ+R SG+PY+ H + A +LA + ++T V A LLHD ++D +
Sbjct: 27 DEVRQAYEFASRAHAGQVRMSGEPYITHPLAVAYILADLQLDATAVVAALLHDVVEDTSV 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++
Sbjct: 87 TDSNIVQTFGAEVASLVDGVTKLKRIRFDSREEQ------QAENLRKMFMAMARDIRVLI 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE++ ++LNP Q
Sbjct: 141 IKLADRLHNMRTLRYQTPATQMRKARETLEIFAPLAHRLGINTIKWELEDISLRYLNPQQ 200
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + E + ++ L Q L + N+ V GR K +YSI+ KM +
Sbjct: 201 YYRIVNLMARKRQEREQFIEGVMDVLRQKLGELNLKAEV-SGRAKHIYSIYRKMTTQHKE 259
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D++ +R+ VE+ +DCY L VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 FNEIYDLFAIRVTVESIKDCYGVLGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGP 319
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 320 NGEPLEIQIRTWEMHQTAEYGIAAHWVYKESGSRRVEDDFAKKLAWFREVLEWQ 373
>gi|258512062|ref|YP_003185496.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478788|gb|ACV59107.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 725
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH+GQMR SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQMRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I + FGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 SAIVQAFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNG 321
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 322 EPLEIQIRTWEMHQTAEYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|226227361|ref|YP_002761467.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
gi|226090552|dbj|BAH38997.1| GTP pyrophosphokinase [Gemmatimonas aurantiaca T-27]
Length = 717
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 230/357 (64%), Gaps = 12/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +++A+ ++ AH GQ+R SG+PY+ HC+E A +LA + ++ V +GLLHD ++D +
Sbjct: 19 DLLVRAYKYSDAAHAGQVRHSGEPYVSHCIEVARILADLQLDTATVTSGLLHDIVEDTDI 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R FG+ +A +V+G++K++ L +RE + + + L++A DAR +L
Sbjct: 79 TVEDIEREFGSEIAQIVDGLTKIANLPMSSREER------QVENYRKLLLSIAKDARVIL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TLD L KR+R A+ET +++ PLA+R G++ + +LE+L FKHL PD
Sbjct: 133 IKLADRLHNMRTLDWLAPEKRRRIAQETRDLYAPLAHRFGMAKVRWELEDLAFKHLEPDA 192
Query: 378 HTELSSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ L+ +LV EA++ E LE+ L D I+ + + GR K L+SI+ KM ++
Sbjct: 193 YKTLA-RLVAAKRGEREALIAQMREPLEKRLTDAGIADVEVTGRPKHLWSIYKKMQQRDR 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++I+D+ +R+IV N +CY AL V+H W V ++KDYI +PK NGYQSLHT V G
Sbjct: 252 PYEDIYDLLAIRVIVPNVLECYHALGVIHDGWTPVQERIKDYIAQPKSNGYQSLHTTVFG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G E+QIRT++MH A+FG AAHW YKE + ++S + + + W R VL Q +A
Sbjct: 312 PGRQLFEIQIRTRDMHRTADFGIAAHWLYKE-NTKNSDELDRHLAWFRQVLELQLDA 367
>gi|325662331|ref|ZP_08150940.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|331086134|ref|ZP_08335216.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|325471333|gb|EGC74556.1| hypothetical protein HMPREF0490_01679 [Lachnospiraceae bacterium
4_1_37FAA]
gi|330406293|gb|EGG85807.1| hypothetical protein HMPREF0987_01519 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 767
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 221/352 (62%), Gaps = 10/352 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A++AH GQ R SG+PY++H + ++LA + + + AG+LHD ++D ++ D
Sbjct: 54 KAYRIAKQAHEGQKRKSGEPYIIHPLWVGIILAELEMDKETIVAGILHDAVEDTIMTRDD 113
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FGA VA LVEGV+KL QLS + ++A+ L MFLAM+ D R +++KLA
Sbjct: 114 IEREFGAEVALLVEGVTKLGQLS---YSKDVDKMELQAENLRKMFLAMSKDIRVIIVKLA 170
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T P K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 171 DRLHNMRTAQFWPPHKQKEKARETMDIYAPIAQRLGISKIKKELDDLALKYYQPEVFYDL 230
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E V ++++ +K+ +I V GR K +SI+ KM+ + T+D++
Sbjct: 231 VKQINDRKTEREEFVQQIVDEVASHMKNADIQAEVY-GRVKHFFSIYKKMVNQDKTVDQV 289
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 290 YDLFAVRIIVDTVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQP 349
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 548
E+QIRTKEMH AE+G AAHW+YKE + +Q E W R +L WQ
Sbjct: 350 FEIQIRTKEMHKTAEYGIAAHWKYKESGDGKKNIAMQEEEKLSWLRQILEWQ 401
>gi|384135926|ref|YP_005518640.1| (p)ppGpp synthetase I SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339290011|gb|AEJ44121.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 725
Score = 285 bits (730), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH+GQ R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 STIVQTFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNG 321
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 322 EPLEIQIRTWEMHQTAEYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|134098602|ref|YP_001104263.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|291008201|ref|ZP_06566174.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
gi|133911225|emb|CAM01338.1| GTP pyrophosphokinase [Saccharopolyspora erythraea NRRL 2338]
Length = 771
Score = 285 bits (729), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 219/358 (61%), Gaps = 19/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + + +LA +G ++T + A LLHDT++D S +
Sbjct: 68 RAYDVAEDKHRDQRRKSGDPYITHPLAVSTILAELGMDTTTLVAALLHDTVEDTDYSLER 127
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V+ LV+GV+KL ++ A EA+ + M +AMA D R ++IKLA
Sbjct: 128 LSGDFGEEVSHLVDGVTKLDKVKLGA--------AAEAETIRKMIIAMARDPRVLVIKLA 179
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 180 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 239
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + + I++L L ++ V GR K YSIH KM+ + D+
Sbjct: 240 V-RLVANRAPSRDTYLRTVIDELSGQLDTARLAARV-EGRPKHYYSIHQKMIVRGRDFDD 297
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++V+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G
Sbjct: 298 IHDLVGVRILVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPEGK 357
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHWRYKE G H++ + + W R +L WQ EA
Sbjct: 358 PLEVQIRTHEMHRTAEYGIAAHWRYKETKGRNGGSGHTAVEVDEMAWMRQLLDWQREA 415
>gi|354558097|ref|ZP_08977353.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548822|gb|EHC18266.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium
metallireducens DSM 15288]
Length = 726
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 225/376 (59%), Gaps = 15/376 (3%)
Query: 184 EFLANAQLKHKIFRED-FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
EFL QLKH +E KA+Y AE+AHRGQ+R SG+ Y+ H +E A +L + +
Sbjct: 5 EFLD--QLKHVFPQESGLAEKAYYFAEKAHRGQLRNSGEDYIQHPLEVAKILLELEMDEA 62
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+AA LLHD ++D + + I + FG VA +V+GV+KL ++ + + +
Sbjct: 63 TIAAALLHDVVEDTPYTIEDIEKEFGPQVALMVDGVTKLGRIPYKTKVEQ------QVEN 116
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
L MFLAMA D R +LIKLADRLHNM TL K++ A+ET+EIF PLANRLGI
Sbjct: 117 LRKMFLAMAKDIRVILIKLADRLHNMRTLKYHSHEKQKEIAQETIEIFAPLANRLGIFRI 176
Query: 362 KVQLENLCFKHLNPDQHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 419
K +LE+L F++L P ++ +LS + E + IE+L L + I + GR
Sbjct: 177 KWELEDLSFRYLKPQEYYDLSEGIAFKRREREDQINEVIEQLRHRLGEVGIHAEI-AGRP 235
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K YSI+ KM+ + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI
Sbjct: 236 KHFYSIYRKMVTQNKELSEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAM 295
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE 539
PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKEG S Q +
Sbjct: 296 PKPNMYQSLHTTLVGAHGEPFEIQIRTWEMHRTAEYGIAAHWKYKEGSKSISGSFDQKLS 355
Query: 540 WARWVLTWQCEAMSKD 555
W R +L WQ + SKD
Sbjct: 356 WIRQLLEWQHD--SKD 369
>gi|423558014|ref|ZP_17534316.1| GTP pyrophosphokinase [Bacillus cereus MC67]
gi|401191282|gb|EJQ98304.1| GTP pyrophosphokinase [Bacillus cereus MC67]
Length = 727
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 161/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTELSSKLV-------ECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + + + E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVSIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQ-MVEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKKLTWFRQILEWQNEA 375
>gi|282897317|ref|ZP_06305319.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
gi|281197969|gb|EFA72863.1| GTP pyrophosphokinase [Raphidiopsis brookii D9]
Length = 756
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 158/356 (44%), Positives = 214/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V A A H GQ R SG+PY+ H V A LL +G N+ ++AAG LHD ++D ++
Sbjct: 42 LVCNALKFAYELHEGQHRKSGEPYIAHPVAVADLLKDLGGNAPMIAAGFLHDVVEDTEVT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG V LVEGV+KLS++ N T+ +A+ MFL+MA D R +++
Sbjct: 102 IEEIEQKFGHEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLSMAQDIRVIVV 155
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD +
Sbjct: 156 KLADRLHNMRTLQYMSETSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPDAY 215
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E E + A E L + ++ I L + GR K LYSI+ KM +++
Sbjct: 216 REIQEHVAEKRTAREEKLNKAKEVLRERIEQAGIKCLDISGRPKHLYSIYQKMQRQQKEF 275
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 HEIYDLAALRIIVETNEECYRALAVVHDAFCPIPGRFKDYIGLPKPNRYQSLHTGVIGLT 335
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE G ++ + W +L WQ +
Sbjct: 336 GRPLEVQIRTMEMHQVAEYGIAAHWKYKETGGSTAQATGTDEKFAWLGQLLDWQSD 391
>gi|75760574|ref|ZP_00740607.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491943|gb|EAO55126.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate)
3'-pyrophosphohydrolase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 727
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 225/379 (59%), Gaps = 28/379 (7%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A ++LA+ + + V +A+ A AH Q R SG+PY++H ++ A +L + +
Sbjct: 16 ASQYLADEDI-------ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
V+AG LHD ++D ++ + I R F +A LV+GV+KL ++ + E +A+
Sbjct: 69 ATVSAGFLHDVVEDTEITLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST
Sbjct: 123 NHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGIST 182
Query: 361 WKVQLENLCFKHLNPDQHTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
K +LE+ ++LNP Q+ + ++ E DE M T EKL++ IS
Sbjct: 183 IKWELEDTSLRYLNPQQYYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-- 239
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
GR K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+
Sbjct: 240 ---GRPKHIYSIYRKMALQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRF 296
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLH+ V G PLEVQIRTKEMH AEFG AAHW YKEG ++
Sbjct: 297 KDYIAMPKANLYQSLHSTVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTG 356
Query: 534 VLQM-VEWARWVLTWQCEA 551
L+ + W R +L WQ EA
Sbjct: 357 TLEKELTWFRQILEWQNEA 375
>gi|83590516|ref|YP_430525.1| (p)ppGpp synthetase SpoT/RelA [Moorella thermoacetica ATCC 39073]
gi|83573430|gb|ABC19982.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Moorella
thermoacetica ATCC 39073]
Length = 717
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 162/376 (43%), Positives = 219/376 (58%), Gaps = 17/376 (4%)
Query: 178 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 237
LE + + +A LK V A+ A AHRGQ R SG+ Y+ H ++ A +LA +
Sbjct: 6 LEQQIRNYQPDADLK-------LVRDAYTLAATAHRGQKRRSGEDYITHPLQVAAILAEL 58
Query: 238 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 297
+ +AA LLHD ++D +S D I FG VA LV+GV+KLS+L +E
Sbjct: 59 QLDVVTIAAALLHDVVEDTPVSLDTIKELFGEEVALLVDGVTKLSRLEYKTKEEQ----- 113
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
+A+ L MFL MA D R +LIKLADRLHNM TL P K+Q A+ETLEIF PLA+RL
Sbjct: 114 -QAETLRKMFLTMAQDIRVILIKLADRLHNMRTLKYHPPEKQQEIARETLEIFAPLAHRL 172
Query: 357 GISTWKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLV 414
GI K +LE+ ++L P+++ EL S + E + ++ L Q L + I +
Sbjct: 173 GIFRLKWELEDQSLRYLEPERYYELVNSINMKRREREEYIRQVVDILRQKLDEAGIKADI 232
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
GR K YSI+ KM+K+ + EI+D+ +R+IV+ ++CY L VVH +W +PG+ K
Sbjct: 233 -QGRPKHFYSIYNKMVKQGKELSEIYDLIAVRVIVDTVKECYAVLGVVHAIWKPIPGRFK 291
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV 534
DY+ PK N YQSLHT V G P E+QIRT EMH AE+G AAHWRYKEG
Sbjct: 292 DYVAMPKPNMYQSLHTTVIGPNGDPFEIQIRTWEMHRTAEYGIAAHWRYKEGGGTSDREF 351
Query: 535 LQMVEWARWVLTWQCE 550
Q + W R +L WQ E
Sbjct: 352 EQKLTWLRQLLDWQRE 367
>gi|452994812|emb|CCQ93581.1| GTP pyrophosphokinase (RelA/SpoT) [Clostridium ultunense Esp]
Length = 721
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 233/355 (65%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+IKA+ AE +H+GQ+R SG+ Y +H AM+LA + + T + AGLLHD L+D +S
Sbjct: 20 MIIKAYNFAEYSHQGQLRNSGEIYFVHPFNVAMILADLNMDGTTIVAGLLHDVLEDTSVS 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + + FG VA+LV+GV+KL +L ++ + +A+ L M +AMA D R ++I
Sbjct: 80 YETLVKEFGEEVANLVDGVTKLKKLKYKTKQES------QAENLRKMVMAMAKDIRVIII 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ + K++ A ETLEI+ PLA+RLGIS K +LE+L ++L+P+ +
Sbjct: 134 KLADRLHNMRTLEYMSEEKKKEKALETLEIYAPLAHRLGISKIKWELEDLSLRYLDPEGY 193
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K+ + E A + I+++++ L++ NI F + GR KS YSI+ KM+ + +
Sbjct: 194 YDLVDKVSKRRKEREAYIQRIIDEIDEKLEEMNI-FRDISGRPKSFYSIYKKMVYQNKSF 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-E 495
++I D+ +R+IV+ +DCY L +VH +W +PG+ KDYI PK N YQSLHT V G E
Sbjct: 253 EQIFDLTAIRVIVDTIKDCYGVLGIVHTMWKPIPGRFKDYIAMPKPNMYQSLHTTVIGPE 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G + EVQIRT +MH AE+G AAHW+YKEG+ + +F ++ W R +L WQ E
Sbjct: 313 GEI-FEVQIRTWDMHRTAEYGIAAHWKYKEGNVKTDNFDEKLT-WLRQLLEWQKE 365
>gi|225376526|ref|ZP_03753747.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
gi|225211625|gb|EEG93979.1| hypothetical protein ROSEINA2194_02168 [Roseburia inulinivorans DSM
16841]
Length = 768
Score = 285 bits (729), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 151/379 (39%), Positives = 233/379 (61%), Gaps = 15/379 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E +A+ + H + KA+ A AH+GQ+R SG+PY++H + A++LA +
Sbjct: 30 EKLYQELIASVRKYHPSTDISLIEKAYNIAYEAHKGQVRKSGEPYIIHPLCVAIILAELE 89
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AGLLHD ++D ++ + I + FGA VA LV+GV+KL QLS + V
Sbjct: 90 LDKETIVAGLLHDVVEDTVMTDEEIKQEFGAEVALLVDGVTKLGQLS-----YDADKVEV 144
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A RLG
Sbjct: 145 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMDIYAPIAQRLG 204
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVL 415
IS K++L++L K+L P+ + +L ++ + + V S +E++++ + + I +
Sbjct: 205 ISKIKIELDDLSLKYLEPEAYYDLVHQIAQRKSVRDDYVQSLVEEVKKHIHEAGIPAQI- 263
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+ KD
Sbjct: 264 DGRAKHFFSIYKKMKNQDKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRFKD 323
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL 535
YI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE +
Sbjct: 324 YIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTYEMHRTAEYGIAAHWKYKEASNNGGAAAP 383
Query: 536 QMV------EWARWVLTWQ 548
V W R +L WQ
Sbjct: 384 MTVTEEEKLSWLRQILEWQ 402
>gi|218288848|ref|ZP_03493099.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240937|gb|EED08114.1| (p)ppGpp synthetase I, SpoT/RelA [Alicyclobacillus acidocaldarius
LAA1]
Length = 725
Score = 285 bits (729), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 220/352 (62%), Gaps = 11/352 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH+GQ R SG+PY+ H + A +LA + ++ + AGLLHD ++D +S
Sbjct: 29 VRRAYEFAAKAHQGQTRLSGEPYISHPLAVAYILADLRLDAAAIMAGLLHDVVEDTSVSD 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I +TFGA VA LV+GV+KL ++ +RE +A+ L MF+AMA D R ++IK
Sbjct: 89 SAIVQTFGAEVATLVDGVTKLKRIKFDSREEQ------QAENLRKMFMAMARDIRVLIIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + R A+ETLEIF PLA+RLGI+T K +LE+L ++LNP Q+
Sbjct: 143 LADRLHNMRTLKYQSPETQVRKARETLEIFAPLAHRLGINTIKWELEDLSLRYLNPQQYY 202
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ + + E + I L + L + N+ V GR K +YSI+ KM+ + +
Sbjct: 203 RIVNLMARKRQEREQYIEGVIAVLREKLAELNLKADV-SGRAKHIYSIYRKMVTQHKEFN 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D++ +R+IVE+ +DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 262 EIYDLFAIRIIVESIKDCYGALGVVHTMWKPMPGRFKDYIAMPKANMYQSLHTTVIGPNG 321
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW YKE G + + + W R VL WQ
Sbjct: 322 EPLEIQIRTWEMHQTAEYGIAAHWVYKESGSKRVEDDFAKKLAWFREVLEWQ 373
>gi|428219731|ref|YP_007104196.1| (p)ppGpp synthetase I SpoT/RelA [Pseudanabaena sp. PCC 7367]
gi|427991513|gb|AFY71768.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudanabaena sp. PCC 7367]
Length = 746
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 219/359 (61%), Gaps = 21/359 (5%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS-TVVAAGLLHDTLDDA 256
E + +A A H GQ RASG+PY+LH +E A +L +G S ++ AG LHD ++D
Sbjct: 40 EAIICRALKFACELHEGQYRASGEPYILHPIEVATILRDLGGGSKAMIVAGFLHDVVEDT 99
Query: 257 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEA-DRLHTMFLAMA-DAR 314
++ I FGA +A LVEGV+KLS+ N SKT A + MFLAMA D R
Sbjct: 100 EVTVADIEAEFGAEIAALVEGVTKLSKF-------NFESKTERAAENFRRMFLAMAQDIR 152
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+++KLADRLHNM TL+ LP K+ A+ET+EIF PLANRLGI K +LE+L FK+++
Sbjct: 153 VIVVKLADRLHNMRTLEHLPAPKQANIARETMEIFAPLANRLGIGQIKWELEDLSFKYID 212
Query: 375 PDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
D + ++ S +VE E + + L ++ ++ + GR K LY I+ KM +
Sbjct: 213 KDAYQQMRSLVVENRRNREERLARVRDILRSRIEQLGLTNFEISGRPKHLYGIYQKMQVR 272
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ +EI+D+ +R+IVEN+E CY+ L VVH + +PG+ KDYI PK N YQSLHTVV
Sbjct: 273 QKKYEEIYDVSAIRIIVENKEACYRVLAVVHDCFRPIPGRFKDYIGLPKPNRYQSLHTVV 332
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS---------SFVLQMVEWAR 542
G PLEVQIRT EMH AE+G AAHW+YKE + H +++ Q+VEW R
Sbjct: 333 IGPNGRPLEVQIRTWEMHHIAEYGIAAHWKYKETNSSHQATSQEDEKFTWLRQLVEWQR 391
>gi|347542568|ref|YP_004857205.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346985604|dbj|BAK81279.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 719
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 ELIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y I TFG VA LVEGVSKL +++ +E +AD + M +AM D R +L
Sbjct: 78 TYSDISATFGEEVAILVEGVSKLDKINYKTKEE------AQADNIRKMLMAMTKDIRVIL 131
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEYKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + E D E + I++ ++ L +++ V+ GR K LYSI+ K+++K T
Sbjct: 192 YYRIAKLVSEKRDDREKLTNEIIKEFKEVLNQSDVN-AVIEGRPKHLYSIYKKLIQKNKT 250
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI D+ +R+IV++ +DCY AL + H+ + + K KDYI PK N YQSLHT V +
Sbjct: 251 IDEIFDLIAIRVIVDSIKDCYVALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTK 310
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P E+QIRTK+MH AE G AAH++YKE F + V W R V+ W E
Sbjct: 311 GGKPFEIQIRTKKMHKVAELGIAAHFKYKEQTDTKDRFDEKFV-WIREVVEWLTET 365
>gi|418036575|ref|ZP_12674991.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354687625|gb|EHE87705.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 753
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 207/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A +LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|295695639|ref|YP_003588877.1| (p)ppGpp synthetase I SpoT/RelA [Kyrpidia tusciae DSM 2912]
gi|295411241|gb|ADG05733.1| (p)ppGpp synthetase I, SpoT/RelA [Kyrpidia tusciae DSM 2912]
Length = 739
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 153/349 (43%), Positives = 214/349 (61%), Gaps = 10/349 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ AH GQ R+SG+ Y+LH + +LA + + T + A LLHD ++D ++ +
Sbjct: 46 EAYTLAKAAHAGQKRSSGEDYILHPIAVTEILADLHLDGTTLTAALLHDVVEDTPVTLEE 105
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG V LV+GV+KL ++ RE +A+ L M LAMA D R +LIKLA
Sbjct: 106 IGKRFGPEVVALVDGVTKLRRIQYATREEQ------QAENLRKMLLAMAKDIRVILIKLA 159
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL +P K+ R AKETLEIF PLA+RLGIS + +LE+L ++LNP Q+ +
Sbjct: 160 DRLHNMRTLRHVPEQKQMRIAKETLEIFAPLAHRLGISRIQWELEDLALRYLNPQQYYRI 219
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + + E A + I+ L + + NI + GR K +YS++ KM+ + EI
Sbjct: 220 ANLMTKKRREREAYIQKVIDTLREKFVELNIKADI-SGRPKHIYSVYRKMVNQNKQFGEI 278
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R+IV+N +DCY L VVH LW +PG+ KDYI PK N YQSLHT V G P
Sbjct: 279 YDLLAVRVIVDNIKDCYAILGVVHTLWRPLPGRFKDYIAMPKPNMYQSLHTTVIGPQGEP 338
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
LE+QIRT EMH AE+G AAHW YK+G Q + W R +L WQ
Sbjct: 339 LEIQIRTWEMHRTAEYGIAAHWLYKQGGRTSDPSFQQKLAWFREILEWQ 387
>gi|376261555|ref|YP_005148275.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium sp. BNL1100]
gi|373945549|gb|AEY66470.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium sp. BNL1100]
Length = 726
Score = 285 bits (728), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 151/349 (43%), Positives = 218/349 (62%), Gaps = 10/349 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ ++ AH GQ R SG+PY++H VE A++LA + + T + A LLHDT++D +YD
Sbjct: 26 KAYSVSKAAHMGQQRISGEPYIIHPVEVAIILAEMELDCTALVAALLHDTIEDTTCTYDQ 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA+LV+GV+KL ++ +E + + L MFLAMA D R ++IKLA
Sbjct: 86 LKAQFGQEVAELVDGVTKLGKIPFTTKEEQ------QVENLRKMFLAMAKDIRVIMIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K+ A+ETLEI+ PLA+RLGIS K +LE++C ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMTQDKQLEKARETLEIYAPLAHRLGISKIKWELEDICLRYLDPKGYYDL 199
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K+ EA +T I+ L + + I + GR K YSI+ KM+K+ T+++I
Sbjct: 200 VEKINTKRKQREAYITIIIDTLREKTNELGIENAQIDGRPKHFYSIYRKMVKQNKTLEQI 259
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ R+IV + +DCY L +VH+L+ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 260 YDLFAFRIIVNSVKDCYAVLGLVHELYKPMPGRFKDYIAMPKPNMYQSLHTTLIGPEGQP 319
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
EVQIRT +MH AE G AAHW+YKEG ++ W R +L WQ
Sbjct: 320 FEVQIRTWDMHRVAEVGIAAHWKYKEG-INNAKDSDNKFAWLRQLLEWQ 367
>gi|433604288|ref|YP_007036657.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
gi|407882141|emb|CCH29784.1| putative GTP pyrophosphokinase [Saccharothrix espanaensis DSM
44229]
Length = 766
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 215/353 (60%), Gaps = 14/353 (3%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D +
Sbjct: 67 AYDVAEEKHRPQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLDQL 126
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG VA LV+GV+KL ++ A EA+ + M +AMA D R ++IKLAD
Sbjct: 127 RVDFGNEVALLVDGVTKLDKVKLGA--------AAEAETIRKMVIAMAKDPRVLVIKLAD 178
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 179 RLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEIV 238
Query: 383 SKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + ++ I +L L+ I+ V GR K YSIH KM+ + D+IH
Sbjct: 239 RLVANRAPSRDTYLSGVINELSSQLEGARITAKV-EGRPKHYYSIHQKMIVRGRDFDDIH 297
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ G+R+ V+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G PL
Sbjct: 298 DLVGVRIQVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKPL 357
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
EVQIRT +MH AE+G AAHWRYKE H+ +++ E W R +L WQ EA
Sbjct: 358 EVQIRTYDMHRTAEYGIAAHWRYKETRGTHTGKGVEVDEMAWMRQLLDWQREA 410
>gi|229192618|ref|ZP_04319579.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
gi|228590925|gb|EEK48783.1| GTP pyrophosphokinase [Bacillus cereus ATCC 10876]
Length = 727
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 157/361 (43%), Positives = 217/361 (60%), Gaps = 21/361 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPATVSAGFLHDVVEDTEI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGIST K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGISTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T EKL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIREKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AEFG AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEFGIAAHWAYKEGKTAETTGTLEKKLTWFRQILEWQN 373
Query: 550 E 550
E
Sbjct: 374 E 374
>gi|104773939|ref|YP_618919.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
gi|103423020|emb|CAI97706.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ATCC 11842]
Length = 753
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 207/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A +LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGILANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|410464128|ref|ZP_11317593.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|409982755|gb|EKO39179.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 740
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 164/421 (38%), Positives = 238/421 (56%), Gaps = 36/421 (8%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ +A+GLLHDT++D +
Sbjct: 22 LITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASIASGLLHDTVEDTKAT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VAD+V+GV+K+S + +E +A+ + M LAMA D R VL+
Sbjct: 82 VDELEELFGEEVADIVDGVTKISLIPFETKEE------AQAENIRKMILAMAEDIRVVLV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ K+ A+ET++I+ PLANRLG+ K +LE+ F++L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPHKQAIIAQETMDIYAPLANRLGLHRIKTELEDWSFRYLKPDIY 195
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L + DE + I L L NI ++ GR K L+S+H KM + LT+
Sbjct: 196 AQLVEGVATHHTVDETFIERVIGHLNDLLGPNNIKARIV-GRRKHLWSVHNKMRVQGLTI 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++HD+ R+IVE +CY L +VH LW VPG+ KDYI+ PK N YQSLHT V G G
Sbjct: 255 DQVHDLVAFRVIVETIRECYHVLGLVHSLWKPVPGRFKDYISMPKANMYQSLHTTVVGPG 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+E+QIRT+EMH AE G AAHW+YKE + + + ++ +W R ++ WQ E +
Sbjct: 315 GERIEIQIRTEEMHRLAEEGVAAHWKYKEREKGKFNPKDVERFQWLRQIMDWQRE-LKDS 373
Query: 556 RSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 615
R V N F D+ + + P K V+E P +T +D
Sbjct: 374 REFVAN-------LRFDLFQDEV-YVFTP----------------KGDVKELPEGATAVD 409
Query: 616 L 616
L
Sbjct: 410 L 410
>gi|417965159|ref|ZP_12606749.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|418372784|ref|ZP_12964876.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|380338744|gb|EIA27606.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-4]
gi|380342453|gb|EIA30898.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 721
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N YQSLHT V +
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTK 310
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRTK+MH AE G AAH++YKE SF + V W R V+ W E
Sbjct: 311 SGKPFEIQIRTKQMHKVAELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|357634035|ref|ZP_09131913.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
gi|357582589|gb|EHJ47922.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio sp. FW1012B]
Length = 738
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 242/423 (57%), Gaps = 40/423 (9%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKAT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGDEVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+++ + + DE+ + I ++ Q + + NI ++ GR K L+S+ KM + LT+
Sbjct: 196 SQIKAGVDRHHTLDESYIERVIGQIRQMVGENNIKARII-GRRKHLWSVFNKMRVQGLTI 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++HD+ R++VE +CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 255 DQVHDLVAFRVLVETIRECYSVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPD 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMS 553
+E+QIRT EM+ AE G AAHW+YKE + F + VE W R ++ WQ E +
Sbjct: 315 GERIEIQIRTVEMNRLAEEGVAAHWKYKE--REKGKFNPKDVERFTWLRQIMDWQRE-LK 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
R V N F D+ + + P K V+E P +T
Sbjct: 372 DSREFVAN-------LRFDLFQDEV-YVFTP----------------KGEVKELPEGATA 407
Query: 614 MDL 616
+DL
Sbjct: 408 VDL 410
>gi|385815572|ref|YP_005851963.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|325125609|gb|ADY84939.1| ppGpp synthetase [Lactobacillus delbrueckii subsp. bulgaricus 2038]
Length = 738
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 207/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H ++ A LA +G + VAAG LHDT++D ++
Sbjct: 12 FVESAYQFAARAHEGQTRASGQPYIVHPIQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 71
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 72 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 125
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 126 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 182
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 183 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 240
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 241 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 300
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 301 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 337
>gi|342732530|ref|YP_004771369.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|384455923|ref|YP_005668518.1| (p)ppGpp synthetase/pyrophosphohydrolase RelA/SpoT [Candidatus
Arthromitus sp. SFB-mouse-Yit]
gi|418016067|ref|ZP_12655632.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|342329985|dbj|BAK56627.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-mouse-Japan]
gi|345506402|gb|EGX28696.1| GTP diphosphokinase [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|346984266|dbj|BAK79942.1| RelA/SpoT protein, (p)ppGpp synthetase/pyrophosphohydrolase
[Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 721
Score = 285 bits (728), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N YQSLHT V +
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTK 310
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRTK+MH AE G AAH++YKE SF + V W R V+ W E
Sbjct: 311 SGKPFEIQIRTKQMHKVAELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|378549163|ref|ZP_09824379.1| hypothetical protein CCH26_03720 [Citricoccus sp. CH26A]
Length = 803
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 220/368 (59%), Gaps = 13/368 (3%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
+ +++H D +I+AF A++AH GQ R SGDPY+ H V A +LA +G T +
Sbjct: 84 LIRTLKVRHPKEDLDLIIRAFEVADKAHAGQRRKSGDPYITHPVAVATILAELGMTGTTL 143
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
A LLHDT++D S + + R FG VA LV+GV+KL ++ +A+ +
Sbjct: 144 AGALLHDTVEDTSYSLEQLRRDFGDEVAHLVDGVTKLDKVK--------FGDAAQAETVR 195
Query: 305 TMFLAMAD-ARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
M LAMAD R ++IKLADRLHN T + R AKETLEI+ PLA+RLG++T K
Sbjct: 196 KMVLAMADDVRVLVIKLADRLHNARTWRYVAPESSARKAKETLEIYAPLAHRLGMNTIKW 255
Query: 364 QLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKS 421
+LE+L F L P + E+ + E E + + ++E+ LK+ I V+ GR K
Sbjct: 256 ELEDLSFAALYPKVYAEIVRLVGERTPEREKNLAALRGQIERDLKEARIR-AVVTGRPKH 314
Query: 422 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 481
YSI+ KM+ + DEIHD+ G+R++V++ DCY AL V+H W+ +PG+ KDYI PK
Sbjct: 315 FYSIYQKMIVRGKDFDEIHDLMGVRVLVDSVRDCYGALGVLHSKWSPLPGRFKDYIAMPK 374
Query: 482 FNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEW 540
N YQSLHT V G G P+E+Q+RT EMH +AE+G AAHW+YK+ S+ Q W
Sbjct: 375 LNMYQSLHTTVIGPGGKPVEIQLRTHEMHRRAEYGVAAHWKYKDQASTPSAATGDQTPGW 434
Query: 541 ARWVLTWQ 548
R V+ WQ
Sbjct: 435 LRSVMDWQ 442
>gi|417962567|ref|ZP_12604748.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
gi|380336322|gb|EIA26345.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-3]
Length = 721
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N YQSLHT V +
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTK 310
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRTK+MH AE G AAH++YKE SF + V W R V+ W E
Sbjct: 311 SGKPFEIQIRTKQMHKVAELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|366164520|ref|ZP_09464275.1| (p)ppGpp synthetase I SpoT/RelA [Acetivibrio cellulolyticus CD2]
Length = 725
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 223/358 (62%), Gaps = 16/358 (4%)
Query: 199 DFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 256
DF + KA+ + AH GQ R SG+P+++H +E A +LA + + T + AG+LHDT++D
Sbjct: 20 DFTLLEKAYLISREAHDGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDT 79
Query: 257 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 315
+Y+ + FG VA LV+GV+KL ++ +E +A+ L MFLAM+ D R
Sbjct: 80 TYTYEQLKDKFGEEVALLVDGVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRV 133
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+LIKLADRLHNM TL + K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P
Sbjct: 134 ILIKLADRLHNMRTLKYMAPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDP 193
Query: 376 DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKK 432
+ +L K+ + E + IE++ LK++ + L GR K YSI+ KM ++
Sbjct: 194 KGYYDLVDKIAKKRRER--EAYIEQIVLTLKERIAELGIEVRLDGRPKHFYSIYRKMEQQ 251
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T+D+I+D++ R+IV + +DCY L +VH+++ +PG+ KDYI PK N YQSLHT V
Sbjct: 252 TKTLDQIYDLFAFRIIVSSVKDCYAVLGLVHEIYKPMPGRFKDYIAMPKPNMYQSLHTTV 311
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G VP E+QIRT +MH AE G AAHW+YKEG S + W R +L WQ E
Sbjct: 312 IGPEGVPFEIQIRTWDMHRVAEVGIAAHWKYKEGSKGDSDD--NKLAWLRQLLDWQKE 367
>gi|251780257|ref|ZP_04823177.1| putative GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-pyrophosphohydrolase [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084572|gb|EES50462.1| RelA/SpoT family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 728
Score = 285 bits (728), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 151/364 (41%), Positives = 226/364 (62%), Gaps = 23/364 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+Y AE AH+ Q R SG+PY++H ++ A +LA +G +++ +AAGLLHD ++D
Sbjct: 19 EMIKKAYYFAEDAHKEQKRESGEPYIIHPIDVAEILAELGMDTSTIAAGLLHDVIEDTTC 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
SY+ + F +A+LV GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 SYESMKTIFNEEIANLVNGVTKLGKIQYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ AKETL+I+ PLA+RLG+S K +LE+L F++L+ D+
Sbjct: 133 IKLADRLHNMRTLKFMTKGKQKLKAKETLDIYAPLAHRLGMSKIKWELEDLSFRYLHEDE 192
Query: 378 HTELSSKLVE------CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L ++ E + +V EKL+++ D +I GR K YSI+ KM+
Sbjct: 193 YYQLVEQIAEKRVERETYINEVVCYLKEKLDESGIDSDIE-----GRPKHFYSIYKKMIN 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K ++++I D+ +R++V + +DCY L +VH ++ +PG+ KDYI PK N YQSLHT
Sbjct: 248 KNKSIEQIFDLTAIRILVNSVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTT 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH----SSFVLQMVEWARWVLTW 547
V G E+QIRT EMH AE+G AAHW+YKEGD F ++V W R +L W
Sbjct: 308 VIGNQGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDKNEEDKAKDFEKKLV-WLRDMLEW 366
Query: 548 QCEA 551
Q E
Sbjct: 367 QKET 370
>gi|281418020|ref|ZP_06249040.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
gi|281409422|gb|EFB39680.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum JW20]
Length = 724
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 222/344 (64%), Gaps = 14/344 (4%)
Query: 211 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 270
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 271 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 329
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPTEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 390 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
+IV +DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRT 325
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
EMH AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 326 WEMHRVAEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|303248713|ref|ZP_07334966.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
gi|302489878|gb|EFL49806.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio fructosovorans JJ]
Length = 750
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/368 (42%), Positives = 227/368 (61%), Gaps = 16/368 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E A LLA + ++ +AAGLLHDT++D +
Sbjct: 29 LLTKAYVFSAAAHAGQVRLSGEPYLSHPLEVAGLLADMRLDAASIAAGLLHDTVEDTKAT 88
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 89 VDEVEELFGDDVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ K+ R A+ET++I+ PLANRLG+ K +LE++ FK+L PD +
Sbjct: 143 KLADRLHNMRTLEFQKPYKQARIAQETMDIYAPLANRLGLHRIKTELEDISFKYLKPDVY 202
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ + + DE+ + I ++++ L+ +I + GR K L+S+ KM + LT+
Sbjct: 203 NQIKTGVDRHRTLDESYIERVISQVKELLRPNHIRARIF-GRRKHLWSVFNKMRVQGLTL 261
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++HD+ R+IVEN +CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 262 DQVHDLVAFRVIVENIRECYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPD 321
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMS 553
+E+QIRT EM+ AE G AAHW+YKE + F + VE W R ++ WQ E +
Sbjct: 322 GERIEIQIRTVEMNRLAEEGVAAHWKYKE--REKGKFNPKDVERFAWLRQIMDWQRE-LK 378
Query: 554 KDRSCVGN 561
R V N
Sbjct: 379 DSREFVAN 386
>gi|297564854|ref|YP_003683826.1| (p)ppGpp synthetase I SpoT/RelA [Meiothermus silvanus DSM 9946]
gi|296849303|gb|ADH62318.1| (p)ppGpp synthetase I, SpoT/RelA [Meiothermus silvanus DSM 9946]
Length = 738
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/365 (43%), Positives = 224/365 (61%), Gaps = 27/365 (7%)
Query: 211 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 270
AH+GQ+R SG+PY++H V A +LA +G ++ + AGLLHDT++D + + I FG
Sbjct: 41 AHQGQLRKSGEPYIVHPVAVAEILAELGLDAETLMAGLLHDTVEDTEVKPEDIEERFGTA 100
Query: 271 VADLVEGVSKLSQLSKLARENNTASKTVEADR---LHTMFLAMA-DARAVLIKLADRLHN 326
V +VEG +K+S+L KLA + ++E R L MF+AMA D R +++KLADRLHN
Sbjct: 101 VRRIVEGETKVSKLYKLAHQVAEERPSLEEQRAEDLRQMFIAMAEDVRIIIVKLADRLHN 160
Query: 327 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 386
+ TL+ +P K+ R A+ETLEI+ PLA+RLGI K +LE+L F++L P+ + +L +L
Sbjct: 161 LRTLEFMPPHKQTRIARETLEIYAPLAHRLGIGQIKWELEDLSFRYLEPEAYADLLGRLK 220
Query: 387 --ECFDEAMVTSAIEKLEQALK-----DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
EA V E LE L+ +I + GR K LYSI KM ++ +++I
Sbjct: 221 SHRAEREAAVERGKEALEAVLQRDSVLGASIQGYEVTGRTKHLYSIWKKMQREGRALEQI 280
Query: 440 HDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQ 486
+D+ LR+I+E ++ CY L +VH LW +PG++KDYI PK NGYQ
Sbjct: 281 YDLLALRVILEPRPTPNLEEKAMREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKPNGYQ 340
Query: 487 SLH-TVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 545
SLH TV+ G GL PLEVQIRT+EMH AE+G AAHW YK+G + + V+W R +
Sbjct: 341 SLHTTVIAGSGL-PLEVQIRTREMHQIAEYGIAAHWLYKQG-LTDPEEIKRRVDWLRSIQ 398
Query: 546 TWQCE 550
WQ E
Sbjct: 399 EWQAE 403
>gi|186685647|ref|YP_001868843.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc punctiforme PCC 73102]
gi|186468099|gb|ACC83900.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc punctiforme PCC 73102]
Length = 757
Score = 284 bits (727), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 159/358 (44%), Positives = 218/358 (60%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H+GQ R SG+PY+ H + A LL +G ++ ++AAG LHD ++D ++
Sbjct: 43 LIGRAFEFAYQLHQGQYRKSGEPYIAHPIAVADLLHDLGGSAAMIAAGFLHDVVEDTEVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 SQEIEERFGAEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD-- 376
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 157 KLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEAF 216
Query: 377 -QHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
Q EL S+ +E + A L++ L+ I F + GR K LYSI+ KM +++
Sbjct: 217 RQMQELVSEKRTAREEKL-ARATNMLQERLQQAGIRFQDISGRPKHLYSIYQKMHRQQKE 275
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV++ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 FHEIYDLAALRIIVQSNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 335
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE H + W R +L WQ +
Sbjct: 336 TGRPLEVQIRTIEMHHIAEYGIAAHWKYKETGGSSISHLTGTDDKFTWLRQLLEWQTD 393
>gi|386394260|ref|ZP_10079041.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
gi|385735138|gb|EIG55336.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfovibrio sp. U5L]
Length = 737
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 166/423 (39%), Positives = 242/423 (57%), Gaps = 40/423 (9%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E A +LA + ++ VAAGLLHDT++D +
Sbjct: 22 IITKAYVFSAAAHAGQVRLSGEPYLSHPLEAAGILADMRLDAASVAAGLLHDTVEDTKAT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VAD+V+GV+K+S + ++E +A+ + M LAMA D R VL+
Sbjct: 82 VDEIEELFGDEVADIVDGVTKISLIPFESKEE------AQAENIRKMILAMANDIRVVLV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ KR A+ET++I+ PLANRLG+ K +LE+L FK+L PD +
Sbjct: 136 KLADRLHNMRTLEFQKPVKRALIAQETMDIYAPLANRLGLHRIKTELEDLSFKYLKPDVY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+++ + + DE+ + I ++ Q + + NI ++ GR K L+S+ KM + LT+
Sbjct: 196 SQIKAGVDRHHTLDESYIERVIGQIRQMVGENNIRARII-GRRKHLWSVFNKMRVQGLTI 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++HD+ R++VE +CY L +VH +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 255 DQVHDLVAFRVLVETIRECYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVVGPD 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMS 553
+E+QIRT EM+ AE G AAHW+YKE + F + VE W R ++ WQ E +
Sbjct: 315 GERIEIQIRTVEMNRLAEEGVAAHWKYKE--REKGKFNPKDVERFTWLRQIMDWQRE-LK 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
R V N F D+ + + P K V+E P +T
Sbjct: 372 DSREFVAN-------LRFDLFQDEV-YVFTP----------------KGEVKELPEGATA 407
Query: 614 MDL 616
+DL
Sbjct: 408 VDL 410
>gi|427704011|ref|YP_007047233.1| RelA/SpoT family (p)ppGpp synthetase [Cyanobium gracile PCC 6307]
gi|427347179|gb|AFY29892.1| (p)ppGpp synthetase, RelA/SpoT family [Cyanobium gracile PCC 6307]
Length = 773
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 159/363 (43%), Positives = 218/363 (60%), Gaps = 11/363 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E V AF A + H GQ RASG+PY++H + A LL IGA++ V+AAG LHD ++D
Sbjct: 64 EALVATAFDFAYQLHDGQFRASGEPYIVHPIAVAGLLRDIGASAAVIAAGFLHDVVEDTQ 123
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D I FG V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 124 VTPDEIEARFGEEVRALVEGVTKLGGI------HFTNRTEAQAENLRRMFLAMASDIRVV 177
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL K+QR A+ET +I+ PLANRLGI +K +LE+L FK L P+
Sbjct: 178 LVKLADRLHNMRTLGALKPEKQQRIARETRDIYAPLANRLGIGRFKWELEDLAFKVLEPE 237
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ ++ E + + ++ L L + + GR K LY I KM +++
Sbjct: 238 SYRDVQQQVATKRSEREERLGATVQLLRDRLVAAGLQDCEVSGRPKHLYGIWSKMQRQQK 297
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR++ + E CY+AL VVH ++ +PG+ KDYI PK NGYQSLHT V G
Sbjct: 298 AFHEIYDVAALRILCPSVESCYRALAVVHDIFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 357
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
P+EVQIRT EMH AE+G AAHW+YKEG + + W R ++ WQ + +
Sbjct: 358 RHR-PIEVQIRTTEMHQVAEYGIAAHWKYKEGGSPAAGDT-ERFNWLRQLVDWQKDDGGE 415
Query: 555 DRS 557
D S
Sbjct: 416 DSS 418
>gi|318040683|ref|ZP_07972639.1| metal dependent phosphohydrolase [Synechococcus sp. CB0101]
Length = 776
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 219/362 (60%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF+ A + H GQ+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D
Sbjct: 60 EGLLASAFHFAFQLHDGQVRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTD 119
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ + I + FG V LVEGV+KL + + T +A+ L MFLAMA D R V
Sbjct: 120 VTPEEIEQHFGLEVRGLVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMASDIRVV 173
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 174 LVKLADRLHNMRTLGALKPEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPE 233
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ ++ E + ++ L L ++ + GR K LY I KM +++
Sbjct: 234 AYRDVQQQVASKRSDREERLGVTVQLLRDRLAGVGLADCEVSGRPKHLYGIWSKMERQQK 293
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+I N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 294 AFHEIYDVAALRIICPNLESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 353
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AEFG AAHW+YKEG ++ + W R ++ WQ + +
Sbjct: 354 RHR-PIEVQIRTAEMHRVAEFGIAAHWKYKEGGSPAATGSDAERFNWLRQLVDWQKDGVG 412
Query: 554 KD 555
D
Sbjct: 413 DD 414
>gi|335048883|ref|ZP_08541895.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
gi|333764666|gb|EGL42052.1| GTP diphosphokinase [Megasphaera sp. UPII 199-6]
Length = 733
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 155/350 (44%), Positives = 218/350 (62%), Gaps = 11/350 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A AH+ Q R SG+ Y++H + A +LA + ++T + A LLHD ++D D
Sbjct: 32 KAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDD 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 92 IEKLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L
Sbjct: 146 DRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDL 205
Query: 382 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E +V AIE L +AL +I F + GR K YSI+ KM K + ++
Sbjct: 206 VDQMKQKRHVREEIVNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQV 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N YQSLHT V G P
Sbjct: 265 YDLYAIRIIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP 324
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 548
+E+QIRT EMH AE+G AAHWRYKEG + + + W R +L WQ
Sbjct: 325 VEIQIRTWEMHRVAEYGVAAHWRYKEGRANAGANEFDEKMGWLRNLLEWQ 374
>gi|258645309|ref|ZP_05732778.1| GTP diphosphokinase [Dialister invisus DSM 15470]
gi|260402658|gb|EEW96205.1| GTP diphosphokinase [Dialister invisus DSM 15470]
Length = 792
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/389 (40%), Positives = 229/389 (58%), Gaps = 20/389 (5%)
Query: 170 EDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVE 229
E N + L+TY E + ++H AF A++AH GQ+RA+G+PY++H +
Sbjct: 67 EYNKLMEKLKTYIHETQSMETIRH----------AFEIAQKAHEGQIRATGEPYIIHPLA 116
Query: 230 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 289
A +LA + ++ + A LLHD ++D + + I R FG VA +V+G++KLSQ +
Sbjct: 117 VAYILAELEIDAQGIIAALLHDVVEDTAYTLEDIRRIFGDEVAFIVDGITKLSQFHYKDK 176
Query: 290 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
E+ + + MFLAMA D R V+IKLADRLHNM TL K+ R AKET+EI
Sbjct: 177 EDQ------QTENFRKMFLAMAQDIRVVVIKLADRLHNMRTLGIFRREKQIRIAKETMEI 230
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALK 406
+ PLA+RLGI K +LE+LCF +L+ +++ +L ++ + E +V +E L Q++
Sbjct: 231 YAPLAHRLGIYNIKWELEDLCFHYLHTEEYYDLVRQMRQKRKAREEIVNDTMEVLHQSIN 290
Query: 407 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 466
D I + GR K YSI+ KM + + +I+D+Y +R+IV CY L + H LW
Sbjct: 291 DAGIK-ATITGRPKHFYSIYKKMKRDNKDLSQIYDLYAVRVIVNTIPQCYAVLGIAHSLW 349
Query: 467 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
+P + KDYI PK N YQSLHT V G P+E+QIRT EMH +E+G AAHWRYKEG
Sbjct: 350 KPLPNRFKDYIAVPKPNMYQSLHTTVIGTKGQPVEIQIRTWEMHHISEYGVAAHWRYKEG 409
Query: 527 DCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+ + Q + W R +L WQ + SK+
Sbjct: 410 NKAGTKDFDQKISWLRRLLEWQDTSNSKE 438
>gi|256004313|ref|ZP_05429295.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|385778263|ref|YP_005687428.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum DSM 1313]
gi|419722157|ref|ZP_14249305.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
gi|419724255|ref|ZP_14251323.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|255991747|gb|EEU01847.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
2360]
gi|316939943|gb|ADU73977.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum DSM
1313]
gi|380772261|gb|EIC06113.1| RelA/SpoT family protein [Clostridium thermocellum YS]
gi|380781728|gb|EIC11378.1| RelA/SpoT family protein [Clostridium thermocellum AD2]
Length = 724
Score = 284 bits (727), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 222/344 (64%), Gaps = 14/344 (4%)
Query: 211 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 270
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 271 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 329
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 390 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
+IV +DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRT 325
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
EMH AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 326 WEMHRVAEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|429221371|ref|YP_007183015.1| RelA/SpoT family (p)ppGpp synthetase [Deinococcus peraridilitoris
DSM 19664]
gi|429132234|gb|AFZ69249.1| (p)ppGpp synthetase, RelA/SpoT family [Deinococcus peraridilitoris
DSM 19664]
Length = 746
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 225/356 (63%), Gaps = 31/356 (8%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+D V +A++ AERAH G +R SG+PY+ H V A +LA +G ++ V AGLLHDT++D
Sbjct: 12 QDRVARAYHFAERAHDGVLRKSGEPYITHPVTVAQILADLGMDTDGVIAGLLHDTVEDTD 71
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAV 316
++++ + + FG V +VEG +K+S+L+K++ +N + +++ L M +AM D R +
Sbjct: 72 VTFEQVEQDFGVVVRRIVEGETKVSKLTKMS--SNLHDE--QSENLRQMLIAMTGDIRVI 127
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL ++P K+QR A+ETLEIF PLA+RLGI K +LE+L FK+L+PD
Sbjct: 128 IVKLADRLHNMRTLASMPAHKQQRIARETLEIFAPLAHRLGIGQIKWELEDLSFKYLDPD 187
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKD-----KNISFLVLCGRHKSLYSIHCKM 429
+ L +L + E + A+E+L L++ + ++ + GR K LYSIH KM
Sbjct: 188 AYESLERRLRTRQSERERHIVGALEQLRATLEEDVELPEWVASTDITGRGKHLYSIHNKM 247
Query: 430 LKKKLTMDEIHDIYGLRLIV-------------ENEED------CYQALRVVHQLWAEVP 470
K+ ++++I D+ +R+I+ E ED CY AL +VH +W +P
Sbjct: 248 RKEGKSLEQIFDLLAVRVILRPKPVEAPPGKAKERAEDAREKRVCYHALGLVHSMWTPIP 307
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G+ KDYI PK NGYQSLHT V P+EVQIR++ MH AEFG AAHW YK+G
Sbjct: 308 GRFKDYIAVPKPNGYQSLHTTVISTAGQPIEVQIRSQRMHEVAEFGIAAHWMYKQG 363
>gi|164687521|ref|ZP_02211549.1| hypothetical protein CLOBAR_01162 [Clostridium bartlettii DSM
16795]
gi|164603295|gb|EDQ96760.1| RelA/SpoT family protein [Clostridium bartlettii DSM 16795]
Length = 736
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 157/353 (44%), Positives = 223/353 (63%), Gaps = 13/353 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
VIKA+ A+ AH G R SG+PY++H + A +LA + + V+AAGLLHD ++D +Y
Sbjct: 25 VIKAYELAKSAHAGVFRKSGEPYIIHPIAVANILADLELDMEVIAAGLLHDVVEDTPYTY 84
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I FG +ADLV+GV+KL ++ +E + +A+ L MFLAMA D R +LIK
Sbjct: 85 EDIKELFGKDIADLVDGVTKLGKIKYQTKEES------QAENLRKMFLAMAKDIRVILIK 138
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL +P K + AKETLEI+ +A+R+GIS K +LE+L K+++P+ +
Sbjct: 139 LADRLHNMRTLKYMPEEKAKYKAKETLEIYGGIAHRIGISKIKWELEDLALKYIDPEGYR 198
Query: 380 ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKLTM 436
EL+ K+ + I+K+ + L+DK + C GR K YSI+ KM KK T
Sbjct: 199 ELAEKI--TMKRSQRQEYIDKIVRLLQDKFKEVDIDCEVSGRPKHFYSIYKKMKKKHKTF 256
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV +DCY L +VH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 257 EEIYDLTAVRIIVNTIKDCYAVLGMVHTMWIPMPGRFKDYIAMPKPNLYQSLHTTVIGPD 316
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH AE G AAHW+YKEG H + + Q ++W R ++ W+
Sbjct: 317 GEPVEIQIRTHEMHEIAENGIAAHWKYKEGITGSHDAKMEQKLKWLRQMMEWE 369
>gi|125973859|ref|YP_001037769.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium thermocellum ATCC
27405]
gi|125714084|gb|ABN52576.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium thermocellum ATCC
27405]
Length = 724
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/344 (43%), Positives = 222/344 (64%), Gaps = 14/344 (4%)
Query: 211 AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAG 270
AH+GQ R SGDP+++H +E A +LA + + T + AG+LHD ++D + + I FG
Sbjct: 34 AHKGQQRESGDPFIVHPMEVANILADLELDCTAIVAGILHDIVEDTSYTIEQIRENFGDE 93
Query: 271 VADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMT 329
VA+LV+GV+KL ++ +E ++A+ L MFLAMA D R +LIKLADRLHNM T
Sbjct: 94 VANLVDGVTKLGKIPYTTKEE------LQAENLRKMFLAMAKDIRVILIKLADRLHNMRT 147
Query: 330 LDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF 389
L +P K+ AKETLEI+ PLA+RLGIS K +LE+LC ++L+P + +L +K+ +
Sbjct: 148 LKYMPPEKQIEKAKETLEIYAPLAHRLGISKIKWELEDLCLRYLDPKGYYDLVNKIAKKR 207
Query: 390 DEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLR 446
E + I ++ + +++K + + + GR K YSI+ KM+++ T+++I+D++ +R
Sbjct: 208 RER--EAYISEIIKTIQEKTVEIGIDAHIEGRPKHFYSIYRKMVQQNKTIEQIYDLFAVR 265
Query: 447 LIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRT 506
+IV +DCY L +VH+++ +PG+ KDYI PK N YQSLHT + G VP EVQIRT
Sbjct: 266 VIVTTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTLIGHEGVPFEVQIRT 325
Query: 507 KEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
EMH AE G AAHW+YKEG + + + W R +L WQ E
Sbjct: 326 WEMHRVAEVGIAAHWKYKEG--KSADDYDNKLAWLRQLLEWQKE 367
>gi|410696071|gb|AFV75139.1| (p)ppGpp synthetase, RelA/SpoT family [Thermus oshimai JL-2]
Length = 732
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 247/414 (59%), Gaps = 42/414 (10%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ AE AH GQ R SG+PY+ H V A +LA++ ++ V AGLLHD ++D ++ + +
Sbjct: 35 AYRFAEAAHAGQRRRSGEPYITHPVAVAEILASLRMDAETVMAGLLHDVVEDCGVAPEEL 94
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
R FGAGV +VEG +K+S+L K+A N + A+ L MF+AMA D R +++KLAD
Sbjct: 95 ERRFGAGVRRIVEGETKVSKLYKMA---NLEGEERRAEDLRQMFIAMAEDVRIIIVKLAD 151
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHN+ TL+ +P K++R A+ETLEI+ PLA+RLG+ K +LE+L F++L+P+ + L
Sbjct: 152 RLHNLRTLEHMPPEKQRRIAQETLEIYAPLAHRLGMGQIKWELEDLSFRYLHPEAYQSLL 211
Query: 383 SKLVECFD--EAMVTSAIEKLEQAL-KDK----NISFLVLCGRHKSLYSIHCKMLKKKLT 435
+L E + E +V A+ +L++AL KD+ I + GR K LYSI KM ++
Sbjct: 212 ERLKEGQEAREKLVERAMARLKEALEKDELLQAQIQGFEVTGRPKHLYSIWKKMEREGKA 271
Query: 436 MDEIHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKF 482
+++I+D+ +R+I++ ++ CY L +VH LW +PG++KDYI PK
Sbjct: 272 LEQIYDLLAVRVILDPKPSATEEARSLREKQVCYHVLGLVHALWQPIPGRVKDYIAVPKP 331
Query: 483 NGYQSLHTVVTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWA 541
NGYQSLHT V EGL PLEVQIRT+EMH AE+G AAHW YKEG V + V W
Sbjct: 332 NGYQSLHTTVIALEGL-PLEVQIRTREMHKVAEYGIAAHWLYKEG-LTDPEEVKRRVSWL 389
Query: 542 RWVLTWQ---------CEAMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
+ + WQ EA++KD +G + P P A F+Y
Sbjct: 390 KSIQEWQQEFSSSREFVEAVTKD--LLGGRVFVFTPKGRIINLPKGATPVDFAY 441
>gi|291561450|emb|CBL40249.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SS3/4]
Length = 761
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 160/398 (40%), Positives = 247/398 (62%), Gaps = 25/398 (6%)
Query: 169 MEDN---IVEGNLETYA---------KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQM 216
ME+N +EG+LE A ++ +A+ + H + KA+ A+ AH+ Q
Sbjct: 1 MEENKLKTIEGDLEAPADFTSPDVLYRDLVASIRKYHPSDDLSMIEKAYQLADNAHKDQK 60
Query: 217 RASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVE 276
R SG+PY++H + A++LA + + +AAGLLHD ++D + + + FG VA LV+
Sbjct: 61 RKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTVYTEEQLAELFGKEVALLVD 120
Query: 277 GVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALP 334
GV+KL+QLS +A K ++A+ L MFLAMA D R ++IKLADRLHNM TL +
Sbjct: 121 GVTKLTQLSW------SADKVEMQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQYMR 174
Query: 335 LCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EA 392
K++ A+ET+EI+ PLA+RLGIS K++L++L ++L P+ + EL K+ + +
Sbjct: 175 PEKQKEKARETIEIYSPLADRLGISKIKIELDDLALRYLEPNVYKELEEKIALTSEARQK 234
Query: 393 MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENE 452
+ I +++ +++ I V GR K +SI+ KML + T+D+I+DI+ +R+IV++
Sbjct: 235 FIDDIISEIKTHMENAEIRCEV-NGRVKHFFSIYKKMLNQHKTLDQIYDIFAVRIIVDSV 293
Query: 453 EDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQ 512
+DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+QIRT EMH
Sbjct: 294 KDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGTNGQPFEIQIRTFEMHRT 353
Query: 513 AEFGFAAHWRYKE-GDCQHSSF-VLQMVEWARWVLTWQ 548
AE+G AAHW+YKE G Q ++ + + W R +L WQ
Sbjct: 354 AEYGIAAHWKYKESGSGQVAAGDEAKKLSWLRQILEWQ 391
>gi|417961047|ref|ZP_12603537.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
gi|380334505|gb|EIA24897.1| GTP pyrophosphokinase [Candidatus Arthromitus sp. SFB-2]
Length = 638
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 219/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I AF A AH Q R G+PY++H +E A +L+ + + + GLLHD ++D
Sbjct: 18 DSIITAFNFAFNAHINQKRIDGEPYIVHPLEVAYILSEMNLDVNTIIGGLLHDVIEDTEF 77
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y I TFG VA LVEGVSKL +++ +E +A + M +AM D R +L
Sbjct: 78 TYSDIATTFGEEVAILVEGVSKLDKINYKTKEE------AQAGNIRKMLMAMTKDIRVIL 131
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L K+Q +KETL IFVPLA+RLGIS K +LE+L F++LNPD+
Sbjct: 132 IKLADRLHNMRTLKYLSEHKQQEKSKETLNIFVPLAHRLGISKIKWELEDLSFRYLNPDE 191
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +++ + E D E + I + ++ L + N++ ++ GR K LYSI+ K+++K T
Sbjct: 192 YYKIAKLVSEKRDDREKLTNKIITEFKEVLSESNVN-AIIEGRPKHLYSIYKKLIQKNKT 250
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI D+ +R+IV+N ++CY AL + H+ + + K KDYI PK N YQSLHT V +
Sbjct: 251 IDEIFDLIAIRVIVDNIKNCYIALGLAHEKYNPISNKFKDYIAMPKSNNYQSLHTTVLTK 310
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P E+QIRTK+MH AE G AAH++YKE SF + V W R V+ W E
Sbjct: 311 SGKPFEIQIRTKQMHKVAELGIAAHFKYKEQTDTKDSFDEKFV-WIREVVEWLTET 365
>gi|256851206|ref|ZP_05556595.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260660630|ref|ZP_05861545.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
gi|256616268|gb|EEU21456.1| ppGpp synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260548352|gb|EEX24327.1| ppGpp synthetase [Lactobacillus jensenii 115-3-CHN]
Length = 747
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 152/335 (45%), Positives = 211/335 (62%), Gaps = 14/335 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 30 FVERAYEYADKAHSGQKRASGQPYIIHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 89
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I R FG VA +V+GV+KL++ + E A+ M +AMA D R +++
Sbjct: 90 NDDIKREFGEDVAFIVDGVTKLNKYEYKSHEE------FLAENHRKMLIAMAKDLRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP+ +
Sbjct: 144 KLADRLHNMHTLDHLRPDKQRRIASETLDIYAPLADRLGIGTIKWELEDMSLHYLNPEAY 203
Query: 379 ----TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+++SK E E + +AI L+ L +I + + GR K +YSI+ KM+ K
Sbjct: 204 YNIVNQMNSKRSER--EGYIETAIAYLKDTLDSLHIKYDIY-GRPKHIYSIYKKMVNKHK 260
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 261 DFSEIFDLLAVRVIVQNVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKANGYQSLHTTIIG 320
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G LE+QIRT++MH AE+G AAHW YK+GD Q
Sbjct: 321 PGGKTLEIQIRTQQMHEVAEYGVAAHWAYKKGDTQ 355
>gi|363892830|ref|ZP_09319981.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
gi|361962457|gb|EHL15582.1| RelA/SpoT family protein [Eubacteriaceae bacterium CM2]
Length = 733
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 243/423 (57%), Gaps = 37/423 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +IKA+ AE H GQ+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGVEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K + +KET+EIF P+A RLGIS K ++E++ ++L P+
Sbjct: 133 IKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEF 192
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N YQS+HT + G
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMS 553
P+E+QIRT+EMH AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 312 PDGEPVEIQIRTEEMHKTAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKE--- 368
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
+ P F F+ VFV + D V E PT ST
Sbjct: 369 -----------VSDPTEFMESLKIDLFA--------NQVFVFTPKGD---VIELPTDSTP 406
Query: 614 MDL 616
+DL
Sbjct: 407 IDL 409
>gi|218132940|ref|ZP_03461744.1| hypothetical protein BACPEC_00801 [[Bacteroides] pectinophilus ATCC
43243]
gi|217991813|gb|EEC57817.1| RelA/SpoT family protein [[Bacteroides] pectinophilus ATCC 43243]
Length = 776
Score = 284 bits (726), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 226/351 (64%), Gaps = 11/351 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A +AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D ++ D
Sbjct: 67 KAYKIATKAHEGQFRKSGEPYIIHPICVAIILAELELDKESIIAGLLHDVVEDTVMTTDD 126
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FGA VA LV+GV+KL+QL+ E++ ++A+ L MFLAMA D R ++IKLA
Sbjct: 127 ITREFGAEVALLVDGVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVIMIKLA 181
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ K+ ++ET+EI+ P+A+RLGIS KV+L++L ++L PD + +L
Sbjct: 182 DRLHNMRTMQYQSPAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMQYLMPDVYNDL 241
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + EA + S I++++ +++ I + GR K +SI+ KM+ + T+D+I
Sbjct: 242 VKQINMNKENREAFIKSIIKEVKMHIENAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQI 300
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+ VE +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P
Sbjct: 301 YDLFAVRIKVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKENMYQSLHTTLIASNGRP 360
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKEG + + + W R +L WQ
Sbjct: 361 FEIQIRTYEMHRTAEYGIAAHWKYKEGKTGETGNQNEEAKLSWLRQILEWQ 411
>gi|317968168|ref|ZP_07969558.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Synechococcus sp. CB0205]
Length = 786
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/364 (45%), Positives = 220/364 (60%), Gaps = 15/364 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + AF A + H GQ+RASG+PY+ H V A LL IGA++ V+AAG LHD ++D
Sbjct: 69 EALLASAFDFAFQLHDGQVRASGEPYICHPVAVADLLRDIGASAGVIAAGFLHDVVEDTE 128
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAV 316
++ + I + FG+ V LVEGV+KL + + T +A+ L MFLAM +D R V
Sbjct: 129 VTPEEIEQHFGSEVRGLVEGVTKLGGI------HFTNKTEAQAENLRRMFLAMVSDIRVV 182
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP- 375
L+KLADRLHNM TL AL K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P
Sbjct: 183 LVKLADRLHNMRTLGALKPEKQQRIARETREIYGPLANRLGIGRFKWELEDLAFKILEPE 242
Query: 376 ---DQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
D ++SSK + + VT+ I L L + + GR K LY I KM +
Sbjct: 243 AFRDVQQQVSSKRSDREERLGVTADI--LSGKLSSVGLGECEVSGRPKHLYGIWNKMQTQ 300
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ EI+D+ LR+I N E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V
Sbjct: 301 RKAFHEIYDVAALRIICPNVESCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAV 360
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEA 551
G P+EVQIRT EMH AEFG AAHW+YKEG ++ + W R ++ WQ +
Sbjct: 361 IGRHR-PIEVQIRTAEMHRVAEFGIAAHWKYKEGGSPAATGSDAERFNWLRQLVDWQKDG 419
Query: 552 MSKD 555
+ +D
Sbjct: 420 VGED 423
>gi|300812618|ref|ZP_07093031.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496399|gb|EFK31508.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 753
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 206/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|116072003|ref|ZP_01469271.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
gi|116065626|gb|EAU71384.1| metal dependent phosphohydrolase [Synechococcus sp. BL107]
Length = 776
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 216/362 (59%), Gaps = 11/362 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF + + H GQ RASGDPY++H V A LL IGA++ V+AAG LHD ++D
Sbjct: 66 EALLVSAFDFSFQLHEGQFRASGDPYIVHPVAVADLLRDIGASAPVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+S + I FG+ V +LVEGV+KL + R +A+ L MF+AMA D R V
Sbjct: 126 VSLEEIQAHFGSEVRELVEGVTKLGGIHFNDRTE------AQAENLRRMFMAMASDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADR+HNM T+ AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRVHNMRTIGALKEEKRQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + L + L+ + + GR K LY I KM +++
Sbjct: 240 AFREIQQEVATKRSEREQRLGVTVGLLNERLQRAGLEGCEVSGRPKHLYGIWSKMERQQK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+ + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 AFHEIYDVAALRITTPSVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS-SFVLQMVEWARWVLTWQCEAMS 553
P+EVQIRT EMH AEFG AAHW+YKEG S + W R ++ WQ E +
Sbjct: 360 RHR-PIEVQIRTLEMHQVAEFGIAAHWKYKEGGSPASCGSDAERFNWLRQLVDWQQEGGN 418
Query: 554 KD 555
D
Sbjct: 419 DD 420
>gi|428772185|ref|YP_007163973.1| (p)ppGpp synthetase I SpoT/RelA [Cyanobacterium stanieri PCC 7202]
gi|428686464|gb|AFZ46324.1| (p)ppGpp synthetase I, SpoT/RelA [Cyanobacterium stanieri PCC 7202]
Length = 747
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 223/357 (62%), Gaps = 15/357 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTL-DDAFL 258
+ KAF A + H GQ R SG+ Y++H + A LL +G ++ ++AAG LHD + D+ +
Sbjct: 35 LICKAFEYAYKLHEGQYRKSGEAYIIHPIAVAELLRDLGGDAEMIAAGFLHDVVEDNEDI 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ D+I FG+ V LVE V+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 95 TPDHIEELFGSNVRQLVEAVTKLSKF-------NFSNKTERQAENFRRMFLAMAQDIRVI 147
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TLD LP K++ A ET EIF PLANRLG+ +K +LE+L FK+L+
Sbjct: 148 VVKLADRLHNMRTLDFLPSEKQKLIATETKEIFAPLANRLGMWQFKWELEDLSFKYLHSQ 207
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ + S + E EA + I+ + + L NI+ + + GR K LY I+ KM ++K
Sbjct: 208 EYGNIRSLIAERRSDREARINQVIDIITKGLHKSNINPIEVKGRPKHLYGIYEKMQRQKK 267
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
D+I DI LR+IV +++CYQAL VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 268 EFDQIFDIAALRVIVNTKQECYQALAVVHDAFRPIPGRFKDYIGLPKPNLYQSLHTTVVS 327
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQ 548
PLE+QIRT EMH AE+G AAHW+YKE G+ Q+++ Q W R +L WQ
Sbjct: 328 LNGRPLEIQIRTLEMHHIAEYGIAAHWKYKEAGNSQNANLSNDEQKFTWLRQLLDWQ 384
>gi|313123577|ref|YP_004033836.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
gi|312280140|gb|ADQ60859.1| GTP pyrophosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
ND02]
Length = 753
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/333 (45%), Positives = 208/333 (62%), Gaps = 10/333 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP+++
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNPEEY 200
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ S + E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 201 YKIVSMMDAKRSEREDYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNKHKDF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT + G G
Sbjct: 260 NEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTIIGPG 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 320 GKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|402837147|ref|ZP_10885675.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
gi|402275627|gb|EJU24772.1| GTP diphosphokinase [Eubacteriaceae bacterium OBRC8]
Length = 733
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/423 (37%), Positives = 243/423 (57%), Gaps = 37/423 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +IKA+ AE H GQ+R SG+ Y++H V+ A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIKAYEYAENKHEGQVRRSGEAYIVHPVQVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGVEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K + +KET+EIF P+A RLGIS K ++E++ ++L P+
Sbjct: 133 IKLADRLHNMRTLKFMPPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPEF 192
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N YQS+HT + G
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMS 553
P+E+QIRT+EMH AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 312 PDGEPVEIQIRTEEMHKTAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKE--- 368
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
+ P F F+ VFV + D V E PT ST
Sbjct: 369 -----------VSDPTEFMESLKIDLFA--------NQVFVFTPKGD---VIELPTDSTP 406
Query: 614 MDL 616
+DL
Sbjct: 407 IDL 409
>gi|410667595|ref|YP_006919966.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
gi|409105342|gb|AFV11467.1| GTP pyrophosphokinase RelA [Thermacetogenium phaeum DSM 12270]
Length = 726
Score = 283 bits (725), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 223/369 (60%), Gaps = 10/369 (2%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
LA + + F + V +A+ A+ AHRGQ R SG+ ++ H ++ A +LA + + T +
Sbjct: 6 LLAKIEQYYPNFDRELVERAYLFAKEAHRGQFRNSGEAFIEHPLQVACILADLQLDITSI 65
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
AGLLHD ++D S I FG V LV GV+KL ++ ++E+ A+ L
Sbjct: 66 VAGLLHDVVEDTNTSLQDIETDFGPEVRFLVAGVTKLGKIEYKSKEDR------HAENLR 119
Query: 305 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
MFLAMA D R +LIKLADRLHN+ TL A + K++ A+ETLEIF P+A+RLGI K
Sbjct: 120 KMFLAMARDIRVILIKLADRLHNLRTLGAHEVPKQREIARETLEIFAPVAHRLGIYKIKW 179
Query: 364 QLENLCFKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKS 421
++E+L F++L PD++ EL+ ++ + E + I KL + L + I + GR K+
Sbjct: 180 EMEDLAFRYLEPDKYYELADRIAKKRKEREDYINLVITKLREKLTEAGIKAEI-SGRPKN 238
Query: 422 LYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPK 481
YSI+ KM+ + + EI+D+ +R+IVE ++CY L +VH +W +PG+ KDYI PK
Sbjct: 239 FYSIYRKMVDQGKDLSEIYDLVAVRVIVETVKECYATLGIVHTMWKPIPGRFKDYIAMPK 298
Query: 482 FNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWA 541
N YQSLHT + G P E+QIRT EMH AE+G AAHWRYKEG + + + W
Sbjct: 299 QNMYQSLHTTLVGPLGEPFELQIRTFEMHRTAEYGIAAHWRYKEGGRLNDPEFEKKLSWL 358
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 359 RQILEWQHE 367
>gi|363894837|ref|ZP_09321896.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
gi|361961297|gb|EHL14508.1| hypothetical protein HMPREF9629_02165 [Eubacteriaceae bacterium
ACC19a]
Length = 733
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 225/358 (62%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I+A+ AE+ H GQ+R SG+ Y++H +E A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIRAYEYAEKKHDGQVRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGAEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K + +KET+EIF P+A RLGIS K ++E++ ++L PD
Sbjct: 133 IKLADRLHNMRTLKFMTPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDF 192
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N YQS+HT + G
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT+EMH AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 312 PDGEPVEIQIRTEEMHKTAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKEV 369
>gi|290968824|ref|ZP_06560361.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
gi|290781120|gb|EFD93711.1| GTP diphosphokinase [Megasphaera genomosp. type_1 str. 28L]
Length = 733
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/350 (44%), Positives = 217/350 (62%), Gaps = 11/350 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A AH+ Q R SG+ Y++H + A +LA + ++T + A LLHD ++D D
Sbjct: 32 KAFLLAADAHKDQRRVSGEWYIVHPLAVAQILADMKIDATTITASLLHDVVEDTAYMLDD 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KL++L +E+ + + + MFLAMA D R V+IKLA
Sbjct: 92 IENLFGKEVAFLVDGVTKLNRLDYRTKEDQ------QINSMRKMFLAMAKDVRVVVIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++R ++ETLEIF PLA+RLGI K +LE+L F++L PD++ +L
Sbjct: 146 DRLHNMRTLRFMRSDKQKRISQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPDKYYDL 205
Query: 382 SSKLVEC--FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E +V AIE L +AL +I F + GR K YSI+ KM K + ++
Sbjct: 206 VDQMKQKRHVREEIVNEAIEVLRKALTASHIQFEI-NGRPKHFYSIYKKMKKDNRDLSQV 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV+ +DCY L +VH LW +P + KDYI PK N YQSLHT V G P
Sbjct: 265 YDLYAIRIIVDTVQDCYGVLGIVHSLWKPLPYRFKDYIAMPKPNNYQSLHTTVIGTRGQP 324
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 548
+E+QIRT EMH AE+G AAHWRYKEG + + + W R +L WQ
Sbjct: 325 VEIQIRTWEMHRVAEYGVAAHWRYKEGRANAGANEFDEKMGWLRNLLEWQ 374
>gi|205374215|ref|ZP_03227014.1| GTP diphosphokinase [Bacillus coahuilensis m4-4]
Length = 708
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 224/358 (62%), Gaps = 14/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A++AH+ Q R SG+PY++H ++ A +LA + ++ VAAG LHD ++D +S
Sbjct: 3 LVQKAYEYADKAHKEQFRKSGEPYIIHPIQVAGILADLEMDAATVAAGFLHDVVEDTPIS 62
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I TF VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 63 KQDIAETFNEEVAMLVDGVTKLGKIKFKSQEEQ------QAENHRKMFVAMAQDIRVILI 116
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ET+EIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 117 KLADRLHNMRTLKHLPAEKQRRIANETIEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 176
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + + DE V I ++E +L+D +I L GR K +YSI+ KM+ +
Sbjct: 177 YRIVNLMKKKRDEREQYVDDVIHEMEDSLRDVDIH-AELSGRPKHIYSIYRKMVLQNKQF 235
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 236 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 295
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD---CQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT++MH AE+G AAHW YKE ++F ++ W R +L +Q E+
Sbjct: 296 GDPLEVQIRTRDMHRIAEYGVAAHWAYKEEKEHVASRNTFDKKL-SWFREILEFQNES 352
>gi|212696222|ref|ZP_03304350.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
gi|212676851|gb|EEB36458.1| hypothetical protein ANHYDRO_00758 [Anaerococcus hydrogenalis DSM
7454]
Length = 726
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 224/358 (62%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S D + FG + LV+GV+KL +L+ RE +A+ + M LAM+ D R +L
Sbjct: 86 SKDQMRDLFGEEITFLVDGVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 378 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ EL+ +K E E + IE L+++L I++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--RENYINEIIETLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVF 316
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P EVQIRT++MH + E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 317 GADSKPFEVQIRTRQMHYECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|72162489|ref|YP_290146.1| RelA/SpoT protein [Thermobifida fusca YX]
gi|71916221|gb|AAZ56123.1| RelA/SpoT protein [Thermobifida fusca YX]
Length = 814
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 218/359 (60%), Gaps = 20/359 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ A HR Q R SGDPY+ H + A +LA +G +AAGLLHDT++D +
Sbjct: 115 LIERAYDVAAHYHRSQKRKSGDPYITHPLAVATILAELGMQEATIAAGLLHDTVEDTEYT 174
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG +A+LV+GV+KL ++ + +A+ + M +AMA D R ++I
Sbjct: 175 LDQLRSDFGDEIAELVDGVTKLDKVK--------YGEATQAETVRKMVVAMARDIRVLVI 226
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KL DRLHNM TL LP KR++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 227 KLCDRLHNMRTLRYLPQAKREKKARETLEIYAPLAHRLGMNTIKWELEDLAFATLYPKRF 286
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E++ + E + + IE + L++ I V GR K YSI+ KM+ + +
Sbjct: 287 DEIARLVAERAPRRDVYLQEVIEIVSADLREAKIKATVR-GRPKHYYSIYQKMIARNVGF 345
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ G+R+IV++ DCY AL ++H W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 346 DEIYDLVGIRVIVDSVRDCYAALGIIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPE 405
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
P+E+QIRT+ MH +AE+G AAHW+YKE G + +S + W R ++ WQ E
Sbjct: 406 GSPVELQIRTRAMHRRAEYGIAAHWKYKEERNNGGKAKGASTDMA---WLRQLIDWQQE 461
>gi|363889992|ref|ZP_09317340.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
gi|361966090|gb|EHL19031.1| hypothetical protein HMPREF9628_01782 [Eubacteriaceae bacterium
CM5]
Length = 733
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 225/358 (62%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D +I+A+ AE+ H GQ+R SG+ Y++H +E A +LA + + +AAGL+HD ++D
Sbjct: 19 DILIRAYEYAEKKHDGQVRRSGEKYIMHPIEVAGILAELELDVATIAAGLMHDVVEDTDT 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA +A LV+GV+KL ++ ++E N + + L MF+AMA D R VL
Sbjct: 79 TNEQMINMFGAEIATLVDGVTKLGKIDYKSKEEN------QTENLRKMFMAMAKDVRVVL 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K + +KET+EIF P+A RLGIS K ++E++ ++L PD
Sbjct: 133 IKLADRLHNMRTLKFMTPRKAREKSKETIEIFAPIAGRLGISKIKWEMEDIALRYLEPDF 192
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALK-DKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ K+ + + + I KL++ ++ + NI + GR K++YSI+ KM K
Sbjct: 193 YFDMERKISRRITQRDSYINGIISKLKEKIQVEANIP-CEIYGREKNMYSIYKKMKFKNK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+ +EI+D +R++V+ +DCY + +VH +W +P + KDYI PK N YQS+HT + G
Sbjct: 252 SFEEIYDFIAVRVVVKELKDCYGVIGIVHTIWKPIPTRFKDYIAMPKVNMYQSIHTTIFG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT+EMH AE+G AAHW+YKEG + S + + + W R ++ WQ E
Sbjct: 312 PDGEPVEIQIRTEEMHKTAEYGIAAHWKYKEGRIDTNESDMDKKLAWLRQIMDWQKEV 369
>gi|228993146|ref|ZP_04153068.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
gi|228999195|ref|ZP_04158776.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|229006742|ref|ZP_04164376.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228754603|gb|EEM04014.1| GTP pyrophosphokinase [Bacillus mycoides Rock1-4]
gi|228760540|gb|EEM09505.1| GTP pyrophosphokinase [Bacillus mycoides Rock3-17]
gi|228766605|gb|EEM15246.1| GTP pyrophosphokinase [Bacillus pseudomycoides DSM 12442]
Length = 728
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/362 (42%), Positives = 220/362 (60%), Gaps = 21/362 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T +KL++ +IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIRDKLKEVAIQPDIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AE+G AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEYGIAAHWAYKEGKAAEATGTLEKKLTWFRQILEWQN 373
Query: 550 EA 551
EA
Sbjct: 374 EA 375
>gi|386714927|ref|YP_006181250.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
gi|384074483|emb|CCG45976.1| GTP pyrophosphokinase [Halobacillus halophilus DSM 2266]
Length = 734
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 217/357 (60%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ AE AH Q R SG+PY++H ++ A +L + + +A G LHD ++D +S
Sbjct: 27 FIRRAYQFAEEAHSDQFRKSGEPYIIHPIQVAGILVNLEMDPETIAGGFLHDVVEDTEVS 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + F V+ LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 IEEIEKAFNTEVSMLVDGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + +E + I+++ LKD NI L GR K LYSI+ KM+ +
Sbjct: 201 YRIVHLMKQKRNEREHYIEEVIDEIRSQLKDVNID-ADLNGRPKHLYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+ V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRITVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHW YKEG SF ++ W R +L WQ E
Sbjct: 320 GDPLEVQIRTHDMHEIAEYGIAAHWAYKEGRQSTAEQSFEEKLT-WFREILEWQSET 375
>gi|282850510|ref|ZP_06259889.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
gi|282580003|gb|EFB85407.1| GTP diphosphokinase [Veillonella parvula ATCC 17745]
Length = 746
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 233/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ TF+ + E Y +L + + D V+KAF A++AH GQ RAS
Sbjct: 10 ALVEQSTFDKSKALAE--FMEYIHTYLTDDEC-------DQVLKAFELADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+ +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++ DCY
Sbjct: 235 TMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|418702279|ref|ZP_13263190.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410758798|gb|EKR25024.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bataviae str. L1111]
Length = 674
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 171/470 (36%), Positives = 255/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D RA+LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRAILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|440680395|ref|YP_007155190.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
gi|428677514|gb|AFZ56280.1| (p)ppGpp synthetase I, SpoT/RelA [Anabaena cylindrica PCC 7122]
Length = 758
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 216/358 (60%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+ Y+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 42 DLICRAFKYAYQLHQGQYRKSGEAYIAHPVAVASLLRDLGGSPAMIAAGFLHDVVEDTEV 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R ++
Sbjct: 102 TIEQIEELFGAEVRLLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIV 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 156 VKLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPDA 215
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
E+ + E E + + L + L+ I L + GR K LYSI+ KM +++
Sbjct: 216 FREIQQHVSEKRTAREEKLLKTTDVLRERLQQAGIQCLDISGRPKHLYSIYQKMHRQQKE 275
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 FHEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 335
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLEVQIRT +MH AE+G AAHW+YKE ++ V E W R +L WQ +
Sbjct: 336 TGRPLEVQIRTVDMHHIAEYGIAAHWKYKETGSSTNNQVTNSDEKFTWLRQLLEWQSD 393
>gi|433463434|ref|ZP_20420988.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
gi|432187529|gb|ELK44809.1| GTP pyrophosphokinase [Halobacillus sp. BAB-2008]
Length = 734
Score = 283 bits (724), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 217/356 (60%), Gaps = 13/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ AE+AH Q R SG+PY++H ++ A +L + + VA G LHD ++D ++
Sbjct: 27 FIRRAYEFAEKAHSNQFRKSGEPYIIHPIQVAGILVNLEMDPETVAGGFLHDVVEDTDIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEEIGDAFNTEVAMLVDGVTKLGKIKYKSKEAQ------QAENHRKMFVAMAKDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + +E + I +++ L D NI L GR K LYSI+ KM+ +
Sbjct: 201 YRIVHLMKQKRNEREHYIEEVINEIQTQLDDVNIQ-ADLNGRPKHLYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+ VE+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRITVESIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT +MH AE+G AAHW YKEG SF ++ W R +L WQ E
Sbjct: 320 GDPLEVQIRTHDMHEIAEYGIAAHWAYKEGKQSAAEQSFEEKLT-WFREILEWQNE 374
>gi|355673973|ref|ZP_09059325.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
gi|354814096|gb|EHE98697.1| hypothetical protein HMPREF9469_02362 [Clostridium citroniae
WAL-17108]
Length = 761
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 226/355 (63%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ AH+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 45 MIQKAYKIADEAHKEQRRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTIMT 104
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + + FG+ V+ LV+GV+KL+QL+ + ++AD L MFLAMA D R ++I
Sbjct: 105 LDQLTKEFGSEVSFLVDGVTKLTQLNW-----DKDKVEIQADNLRKMFLAMAKDIRVIII 159
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T K++ A+ET+EI+ P+A+RLGIS K++L++L K L P+ +
Sbjct: 160 KLADRLHNMRTGQYWKPEKQKEKARETMEIYAPIADRLGISKIKIELDDLSLKFLKPEVY 219
Query: 379 TELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K L + E V +++++ +K+ + V GR K +SI+ KM+ + T+
Sbjct: 220 YDLVEKVDLRKDARETFVQEIVDEVKSHMKEAGVEATV-GGRVKHFFSIYKKMVNQNKTL 278
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R++VE +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 279 DQIYDLFAVRIMVETVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGGN 338
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE G Q S ++ W R +L WQ
Sbjct: 339 GQPFEIQIRTYEMHRTAEYGIAAHWKYKESGSGQVQAGSEEAKL-SWLRQILEWQ 392
>gi|269798272|ref|YP_003312172.1| (p)ppGpp synthetase I SpoT/RelA [Veillonella parvula DSM 2008]
gi|269094901|gb|ACZ24892.1| (p)ppGpp synthetase I, SpoT/RelA [Veillonella parvula DSM 2008]
Length = 746
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/392 (40%), Positives = 233/392 (59%), Gaps = 19/392 (4%)
Query: 160 ALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRAS 219
AL+++ TF+ + E Y +L + + D V+KAF A++AH GQ RAS
Sbjct: 10 ALVEQSTFDKSKALAE--FMEYIHTYLTDDEC-------DQVLKAFELADKAHEGQFRAS 60
Query: 220 GDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVS 279
G+PY++H + A +LA + + + A L+HD ++D S + + FG+ VA LV+GV+
Sbjct: 61 GEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYSKEDLEEMFGSEVAFLVDGVT 120
Query: 280 KLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
KL+Q +E+ + + M LAMA D R V+IKL DRLHNM TL + K+
Sbjct: 121 KLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIKLGDRLHNMRTLKHMRSDKQ 174
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTS 396
+R AKETLEIF PLA+RLGI K +LE+L F++L P+++ +L ++ + E +V
Sbjct: 175 KRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYYDLVDQMKQKRQVREDIVND 234
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
+ +L +AL + +I + GR K YSI+ KM K + +I+D+ +R+IV++ DCY
Sbjct: 235 TMSQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRDLSQIYDLLAVRVIVDSIPDCY 293
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
L + H LW +P + KDYI+ PK N YQSLHT V G P+E+QIRT EMH +E+G
Sbjct: 294 AVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMGQPVEIQIRTWEMHRVSEYG 353
Query: 517 FAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
AAHWRYKEG+ Q V W R VL WQ
Sbjct: 354 VAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|375291020|ref|YP_005125560.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 241]
gi|375293231|ref|YP_005127770.1| GTP pyrophosphokinase [Corynebacterium diphtheriae INCA 402]
gi|376242956|ref|YP_005133808.1| GTP pyrophosphokinase [Corynebacterium diphtheriae CDCE 8392]
gi|376245851|ref|YP_005136090.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC01]
gi|376254443|ref|YP_005142902.1| GTP pyrophosphokinase [Corynebacterium diphtheriae PW8]
gi|376290560|ref|YP_005162807.1| GTP pyrophosphokinase [Corynebacterium diphtheriae C7 (beta)]
gi|371580691|gb|AEX44358.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 241]
gi|371582902|gb|AEX46568.1| GTP pyrophosphokinase [Corynebacterium diphtheriae INCA 402]
gi|372103956|gb|AEX67553.1| GTP pyrophosphokinase [Corynebacterium diphtheriae C7 (beta)]
gi|372106198|gb|AEX72260.1| GTP pyrophosphokinase [Corynebacterium diphtheriae CDCE 8392]
gi|372108481|gb|AEX74542.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC01]
gi|372117527|gb|AEX69997.1| GTP pyrophosphokinase [Corynebacterium diphtheriae PW8]
Length = 759
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|376248640|ref|YP_005140584.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC04]
gi|372115208|gb|AEX81266.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC04]
Length = 759
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|284048851|ref|YP_003399190.1| (p)ppGpp synthetase I SpoT/RelA [Acidaminococcus fermentans DSM
20731]
gi|283953072|gb|ADB47875.1| (p)ppGpp synthetase I, SpoT/RelA [Acidaminococcus fermentans DSM
20731]
Length = 740
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 228/375 (60%), Gaps = 15/375 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A+EF A + +FV +A+ A AH Q RASG+PY++H + A +LA + +
Sbjct: 11 AEEFYARISKYLTPRQVEFVREAYNFAAEAHAKQKRASGEPYIIHPLGVASILAQLQMDD 70
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+AA LHD ++D ++ D + FG VA LV+GV+KL ++ ++RE + +
Sbjct: 71 VTLAAAFLHDVVEDTEVTLDQMEDIFGREVAMLVDGVTKLGKIEYISREEQ------QVE 124
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MFLAMA D R VLIKLADRLHNM T+ +P+ K++R + ETLEI+ PLA+RLGI
Sbjct: 125 NYRKMFLAMAKDIRVVLIKLADRLHNMRTMKFMPVNKQKRISSETLEIYAPLAHRLGIYA 184
Query: 361 WKVQLENLCFKHLNPDQHTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+L F+++ P + EL K+ EAMV A+++L + ++ I+ + GR
Sbjct: 185 IKWELEDLAFRYMEPQHYYELVEQVKVKRHEREAMVQEAMDELRKLCEESGINCQI-QGR 243
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
KS YSI+ KM + T++EI+D+ +R++V+ +DCY L +VH W +PG+ KDYI
Sbjct: 244 PKSFYSIYKKMQRDHKTINEIYDLLAVRVLVDTVKDCYGVLGIVHGKWKPIPGRFKDYIA 303
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM 537
PK NGYQSLHT V PLE+QIRT EMH +E+G AAHWRYKE G + S +
Sbjct: 304 VPKSNGYQSLHTTVVSSSGQPLEIQIRTFEMHKVSEYGVAAHWRYKESGGSKMPSSSDKN 363
Query: 538 VE----WARWVLTWQ 548
V+ W R +L W
Sbjct: 364 VDAKMAWLRQLLEWH 378
>gi|146296035|ref|YP_001179806.1| (p)ppGpp synthetase I SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409611|gb|ABP66615.1| (p)ppGpp synthetase I, SpoT/RelA [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 722
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 224/355 (63%), Gaps = 10/355 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A++ H GQ R+SG+PY++H +E A++LA + + + AGLLHD ++D
Sbjct: 22 NLIKKAYEFAKKYHDGQERSSGEPYIVHPLEVALILADLELDIASIVAGLLHDVVEDTSA 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S I + FG +A LV+GV+KL +L T+ +A+ M +AMA D R +L
Sbjct: 82 SPQEIEQEFGGEIASLVDGVTKLGKLE------FTSKLEQQAENYRKMLIAMAKDIRVIL 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K+++ A+ET++I+ PLA+RLGIS K +LE+L ++L+P+
Sbjct: 136 IKLADRLHNMRTLKYLPPEKQRQKAQETIDIYAPLAHRLGISKIKWELEDLALRYLDPEG 195
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + E + I + + LK+ NI + GR K YSI+ KM ++ T
Sbjct: 196 YYDLVEKIAKKRVEREEYIQRIINLISEKLKEANIEVGQIDGRPKHFYSIYRKMKQQGKT 255
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D++ +R+IV + +DCY L ++H L+ +PG+ KDYI PK N YQSLHT V G
Sbjct: 256 LEEIYDLFAIRIIVNSVKDCYGVLGIIHTLFKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 315
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P EVQIRT +MH AE+G AAHW+YKEG + S+ + W R +L WQ E
Sbjct: 316 EGEPFEVQIRTFDMHRTAEYGIAAHWKYKEGRIK-STDEDEKFAWLRELLEWQKE 369
>gi|451944338|ref|YP_007464974.1| hypothetical protein A605_08050 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
gi|451903725|gb|AGF72612.1| hypothetical protein A605_08050 [Corynebacterium halotolerans YIM
70093 = DSM 44683]
Length = 765
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 222/356 (62%), Gaps = 18/356 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G +R SGDPY+ H + A + A IG ++T + A LLHDT++D +
Sbjct: 57 RAYDTAERLHEGVLRKSGDPYITHPLAVATICAEIGMDTTTLVAALLHDTVEDTDYGLEQ 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AMA D R ++IK+A
Sbjct: 117 LTEEFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMAQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEI 228
Query: 382 SSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+ + D A+ ++ ALK+ NI+ V+ GR K +SI+ KM+ + DE
Sbjct: 229 VRLVADRAPSRDRAL-KEITTQVTAALKENNITAEVM-GRPKHYWSIYQKMIVRGRDFDE 286
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I D+ G+R++V+N +CY A+ VVH L+A +PG+ KDYI+ P+F YQSLHT V G
Sbjct: 287 IFDLVGIRILVDNVNNCYAAIGVVHALYAALPGRFKDYISSPRFGVYQSLHTTVMAGGGK 346
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT EMH AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 347 PLEVQVRTHEMHYNAEFGVAAHWRYKETKGNHKGDQAEVDQMA-WMRQLLDWQKEA 401
>gi|414154562|ref|ZP_11410880.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411453959|emb|CCO08784.1| GTP pyrophosphokinase [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 723
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 222/355 (62%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHRGQ R SG+ Y++H + +++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAEHAHRGQKRISGEDYIVHPLAISIILAELQLDVQTVAAGLLHDVVEDTGIT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FGA VA++V+GV+KL +L +E +A+ L MFLAMA D R +LI
Sbjct: 82 LADIENNFGAEVANMVDGVTKLGKLQYQTKEER------QAENLRKMFLAMAKDIRVILI 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL K++ A+ETL F P+A+RLGI K +LE+L F++L P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLHFFAPMAHRLGIYKIKWELEDLSFRYLEPEQY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ +++ + E + I++L + L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QRMKAQIAKSRAKREEYIQGVIKELAEKLAAVNIKAEI-QGRPKNLYSIYQKMIEQQKEL 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I D+ +R++V + +DCY AL + H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 KDIFDVQAVRVLVNSVKDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPN 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AE+G AAHWRYKEG F ++ W R +L Q EA
Sbjct: 315 GEPVEIQIRTWEMHRVAEYGIAAHWRYKEGAQGEKDFDKKLA-WIRQMLDAQHEA 368
>gi|291518572|emb|CBK73793.1| (p)ppGpp synthetase, RelA/SpoT family [Butyrivibrio fibrisolvens
16/4]
Length = 767
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/380 (40%), Positives = 230/380 (60%), Gaps = 14/380 (3%)
Query: 177 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 236
N + KE + + H + K + A AH GQ R SG+PY++H + A++LA
Sbjct: 31 NPDELYKELIERVRKYHPNTDISMIEKGYLIARNAHEGQCRKSGEPYIIHPLCVAIILAD 90
Query: 237 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 296
+ + + AGLLHD ++D + + I + F VA+LV+GV+KL QL N A K
Sbjct: 91 LELDKETIVAGLLHDVVEDTICTKEEIAQEFSEEVAELVDGVTKLGQL------NYDADK 144
Query: 297 T-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 354
++A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET+EI+ PLA
Sbjct: 145 VEIQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYMTPEKQKEKARETMEIYAPLAQ 204
Query: 355 RLGISTWKVQLENLCFKHLNPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISF 412
RLGIS K++L++L K+L PD + +L K L + + S ++ + + + I
Sbjct: 205 RLGISKVKIELDDLSLKYLEPDAYYDLVEKIALRKSQRTDYINSLVDDVRKHIDAAEIQA 264
Query: 413 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 472
V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+
Sbjct: 265 EVY-GRAKHFFSIYKKMVNQHKTIDQIYDLFAVRIIVDSIKDCYAALGVIHEMYTPIPGR 323
Query: 473 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
KDYI PK N YQSLHT V G P E+QIRT +MH +E+G AAHW+YKE + SS
Sbjct: 324 FKDYIAMPKPNMYQSLHTTVIGPNGAPFEIQIRTYDMHRTSEYGIAAHWKYKES-GEGSS 382
Query: 533 FV--LQMVEWARWVLTWQCE 550
V + + W R +L WQ E
Sbjct: 383 VVGEEEKLSWLREILEWQQE 402
>gi|419860937|ref|ZP_14383577.1| GTP pyrophosphokinase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
gi|387982621|gb|EIK56122.1| GTP pyrophosphokinase [Corynebacterium diphtheriae bv. intermedius
str. NCTC 5011]
Length = 759
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|376251442|ref|YP_005138323.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC03]
gi|376257255|ref|YP_005145146.1| GTP pyrophosphokinase [Corynebacterium diphtheriae VA01]
gi|372112946|gb|AEX79005.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC03]
gi|372119772|gb|AEX83506.1| GTP pyrophosphokinase [Corynebacterium diphtheriae VA01]
Length = 759
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|313893200|ref|ZP_07826777.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442553|gb|EFR60968.1| GTP diphosphokinase [Veillonella sp. oral taxon 158 str. F0412]
Length = 742
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 217/351 (61%), Gaps = 10/351 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V+KAF A++AH GQ RASG+PY++H + A +LA + + + A L+HD ++D +
Sbjct: 42 VLKAFELADKAHEGQFRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSYTK 101
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + + FG+ VA LV+GV+KL+Q +E+ + + M LAMA D R V+IK
Sbjct: 102 EDLEKMFGSEVAFLVDGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVVIK 155
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
L DRLHNM TL + K++R AKETLEIF PLA+RLGI K +LE+L F++L P+++
Sbjct: 156 LGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEKYY 215
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L ++ + E +V + +L +AL + NI + GR K YSI+ KM K +
Sbjct: 216 DLVDQMKQKRQVREDIVNDTMSQLTKALGEANIKADI-KGRPKHFYSIYKKMKKDNRDLS 274
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D+ +R+IV+ DCY L + H LW +P + KDYI+ PK N YQSLHT V G
Sbjct: 275 QIYDLLAVRVIVDTIPDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGTMG 334
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH +E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 335 QPVEIQIRTWEMHRVSEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|429727583|ref|ZP_19262348.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
gi|429151973|gb|EKX94811.1| putative GTP diphosphokinase [Peptostreptococcus anaerobius VPI
4330]
Length = 739
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 243/425 (57%), Gaps = 36/425 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V++A+ AE+AH GQ+R SG+PY++H + A +LA + + + G+LHD ++D
Sbjct: 23 DKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILHDVVEDTEY 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
I FG VA LV+GV+KL ++ + +E + +++ L MFLAMA D R +L
Sbjct: 83 EESDIEEMFGKDVAVLVDGVTKLGKIQYMTKEES------QSENLRKMFLAMAKDMRVIL 136
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ + K + A+ETL+I+ +A+RLGI T K +LE+L + L+P+
Sbjct: 137 IKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELEDLSLRFLDPEG 196
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + + E + + ++ L+ + I V GR K YSI+ KM KK +
Sbjct: 197 YYSLVKKVNKKREQRECYIANIVDMLKGKFQQMEIPSDVY-GRPKHFYSIYRKMKKKNKS 255
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R+IV+ +DCY L VVH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 256 FDEIYDLTAVRIIVDTVKDCYGVLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGA 315
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEAMSK 554
P+E+QIRTKEMH AE+GFAAHW+YKEG L + ++W R ++ W+ +
Sbjct: 316 DGEPVEIQIRTKEMHQVAEYGFAAHWKYKEGVTDKDVSALDEKLQWFRMMMEWEKD---- 371
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
+K P F D +Y+ V+V + + V E PT ST +
Sbjct: 372 ----------VKDPHEFLDALKDDVLTYQ--------VYVFTPQGE---VIELPTGSTTI 410
Query: 615 DLLER 619
D R
Sbjct: 411 DFAYR 415
>gi|429730616|ref|ZP_19265262.1| GTP diphosphokinase [Corynebacterium durum F0235]
gi|429147054|gb|EKX90084.1| GTP diphosphokinase [Corynebacterium durum F0235]
Length = 761
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ +AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S D
Sbjct: 57 RAYNKAERLHEGVYRKSGDPYISHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSIDD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LEHDFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPQKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEI 228
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + +T I+++ ++K+ NI V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLTEIIDQVSASMKENNIPAEVM-GRPKHYWSIYQKMIVRGRDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+ +CY A+ VH L++ +PG+ KDYI+ P+F YQSLHT V G G P
Sbjct: 288 FDLVGIRILVDTPNNCYSAIGAVHALYSAMPGRFKDYISAPRFGVYQSLHTTVMGPGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCEA 551
LEVQ+RT +MH AEFG AAHWRYKE H S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHDMHFNAEFGIAAHWRYKETKGSHKGSQAEVDQMAWMRQLLDWQKEA 401
>gi|376287865|ref|YP_005160431.1| GTP pyrophosphokinase [Corynebacterium diphtheriae BH8]
gi|371585199|gb|AEX48864.1| GTP pyrophosphokinase [Corynebacterium diphtheriae BH8]
Length = 759
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|374297070|ref|YP_005047261.1| RelA/SpoT family (p)ppGpp synthetase [Clostridium clariflavum DSM
19732]
gi|359826564|gb|AEV69337.1| (p)ppGpp synthetase, RelA/SpoT family [Clostridium clariflavum DSM
19732]
Length = 725
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 155/354 (43%), Positives = 221/354 (62%), Gaps = 16/354 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ ++ AH GQ R SG+P+++H +E A +LA + + T + AG+LHDT++D +Y+
Sbjct: 26 KAYQVSKEAHNGQQRVSGEPFIMHPMEVANILAELELDCTAIVAGILHDTIEDTTYTYEQ 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ +E +A+ L MFLAM+ D R +LIKLA
Sbjct: 86 LKEKFGEEVALLVDGVTKLGKIPYTTKEEQ------QAENLRKMFLAMSKDIRVILIKLA 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K+ AKETLEI+ P+A+RLGIS K +LE+L ++L+P + +L
Sbjct: 140 DRLHNMRTLKYMSPEKQIEKAKETLEIYAPIAHRLGISKIKWELEDLSLRYLDPKGYYDL 199
Query: 382 SSKLVECFDEAMVTSAIEKLEQALKDKNISFL----VLCGRHKSLYSIHCKMLKKKLTMD 437
K+ E + IEK+ LK+K IS L L GR K YSI+ KM ++ T+D
Sbjct: 200 VDKIANKRRER--EAYIEKILATLKEK-ISELGIQVRLDGRPKHFYSIYRKMQQQNKTLD 256
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D++ R+IV+ +DCY L +VH+++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 257 QIYDLFAFRVIVDTVKDCYAVLGLVHEIFKPMPGRFKDYIAMPKPNMYQSLHTTVIGPDG 316
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
VP E+QIRT EMH AE G AAHW+YKEG + + W R +L WQ +
Sbjct: 317 VPFEIQIRTWEMHRVAEVGIAAHWKYKEG--KSGGGYENKLAWLRQLLDWQTDT 368
>gi|418029539|ref|ZP_12668077.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689845|gb|EHE89818.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 753
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 206/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVYMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|428201543|ref|YP_007080132.1| RelA/SpoT family (p)ppGpp synthetase [Pleurocapsa sp. PCC 7327]
gi|427978975|gb|AFY76575.1| (p)ppGpp synthetase, RelA/SpoT family [Pleurocapsa sp. PCC 7327]
Length = 765
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/356 (44%), Positives = 217/356 (60%), Gaps = 14/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ R SG+PY+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 48 LICRAFNFAYELHEGQYRKSGEPYIAHPIAVASLLRDLGGDKAMIAAGFLHDVVEDTDVT 107
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 108 LEEIEERFGAEVRQLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVII 160
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++ A ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 161 VKLADRLHNMRTLEHLKPEKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYLEPEA 220
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + S + E EA + E L + L I+ + GR K LY I+ KM +++
Sbjct: 221 YRAVQSLVAEKRTDREARLEKVSEMLRERLTSLGINVREIKGRPKHLYGIYQKMQRQQKE 280
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LR+IV+++++CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 281 FHEIYDIAALRIIVDSKDECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTTVVGL 340
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 548
P+EVQIRT EMH AE+G AAHW+YKE ++ + Q E W R +L WQ
Sbjct: 341 NGRPMEVQIRTLEMHHIAEYGIAAHWKYKETGGSSTAQLSQEDEKFTWLRQLLEWQ 396
>gi|373494894|ref|ZP_09585491.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
gi|371967256|gb|EHO84728.1| hypothetical protein HMPREF0380_01129 [Eubacterium infirmum F0142]
Length = 733
Score = 283 bits (723), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 152/378 (40%), Positives = 230/378 (60%), Gaps = 14/378 (3%)
Query: 178 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 237
+ET A +FL + + + + + AF A + H GQ+R SG+PY +H + A++LA +
Sbjct: 1 METKA-QFLEELKKYNDNYNPEVIGAAFDMAHKLHEGQLRKSGEPYFIHPIAVAIILAQL 59
Query: 238 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 297
G + + GLLHD ++D + + + FG VA LV+GV+KL + +E
Sbjct: 60 GMDEATIVGGLLHDVVEDTEYTREMLVNDFGEEVAVLVDGVTKLGSIKFDTKEE------ 113
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
+A+ L MF AM+ D R ++IKLADRLHNM T + K++ ++ETL+I+ PLA+RL
Sbjct: 114 AQAENLRKMFFAMSKDIRVLIIKLADRLHNMRTAEYWSESKQKEKSRETLDIYAPLASRL 173
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLV 414
GI T K +LE+ K+L+P ++ L ++ E + E ++ S IE++ L+ N+ F +
Sbjct: 174 GIFTVKFELEDTALKYLHPQEYETLKREVSEKREQREKVINSVIERISTNLEQLNLHFDI 233
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
GR K LYSI+ KM+ + +DEI D+ +R+IV++ +DCY L +VH +W +P + K
Sbjct: 234 -SGRSKHLYSIYKKMVLQNKQLDEIFDLTAVRVIVDSVKDCYAVLGLVHTMWKPIPRRFK 292
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSS 532
DYI PK N YQSLHT V G+ P E+QIRT EMH AE+G AAHW+YKEG D + ++
Sbjct: 293 DYIAMPKPNMYQSLHTTVIGDNGEPFEIQIRTFEMHKVAEYGIAAHWKYKEGKSDSKQNN 352
Query: 533 FVLQMVEWARWVLTWQCE 550
L++ W R L WQ E
Sbjct: 353 EDLKLA-WLRQTLEWQQE 369
>gi|289423171|ref|ZP_06424986.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
gi|289156502|gb|EFD05152.1| GTP diphosphokinase [Peptostreptococcus anaerobius 653-L]
Length = 739
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/425 (38%), Positives = 243/425 (57%), Gaps = 36/425 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V++A+ AE+AH GQ+R SG+PY++H + A +LA + + + G+LHD ++D
Sbjct: 23 DKVVRAYELAEKAHDGQVRKSGEPYIIHPLAVANILADMQLDMDTICGGILHDVVEDTEY 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
I FG VA LV+GV+KL ++ + +E + +++ L MFLAMA D R +L
Sbjct: 83 EESDIEEMFGKDVAVLVDGVTKLGKIQYMTKEES------QSENLRKMFLAMAKDMRVIL 136
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ + K + A+ETL+I+ +A+RLGI T K +LE+L + L+P+
Sbjct: 137 IKLADRLHNMRTLEYMDSNKARYKARETLDIYAGIAHRLGIQTIKWELEDLSLRFLDPEG 196
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L K+ + + E + + ++ L+ + I V GR K YSI+ KM KK +
Sbjct: 197 YYSLVKKVNKKREQRECYIANIVDMLKGKFQQMEIPSDVY-GRPKHFYSIYRKMKKKNKS 255
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R+IV+ +DCY L VVH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 256 FDEIYDLTAVRIIVDTVKDCYGVLGVVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGA 315
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQCEAMSK 554
P+E+QIRTKEMH AE+GFAAHW+YKEG L + ++W R ++ W+ +
Sbjct: 316 DGEPVEIQIRTKEMHQVAEYGFAAHWKYKEGVTDKDVSALDEKLQWFRMMMEWEKD---- 371
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
+K P F D +Y+ V+V + + V E PT ST +
Sbjct: 372 ----------VKDPHEFLDALKDDVLTYQ--------VYVFTPQGE---VIELPTGSTTI 410
Query: 615 DLLER 619
D R
Sbjct: 411 DFAYR 415
>gi|204789670|gb|ACI02046.1| hypothetical protein [uncultured bacterium]
Length = 742
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 226/355 (63%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A +AH Q+R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 29 LIEKAYNIASKAHAKQLRKSGEPYIVHPLCVAIILADLQLDKESIVAGLLHDVVEDTVMT 88
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I R FG VA +V+GV+KL ++ + N +A+ L MF+AMA D R +++
Sbjct: 89 DEDIEREFGPDVALIVDGVTKLEKI-----KYNNDKLEYQAENLRRMFIAMAKDIRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL P K++ AKET++I+ PLA RLGIS KV+L++L K+L P+ +
Sbjct: 144 KLADRLHNMRTLSHQPEAKQKEIAKETMDIYAPLAQRLGISKVKVELDDLSLKYLEPEVY 203
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K+ + EA V ++++ +A+ I + GR K +SI+ KML + ++
Sbjct: 204 RDLVDKIAVRKSVREAFVQDIVDEVAEAISAAGIKAQI-DGRVKHFFSIYRKMLNQDKSL 262
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G+
Sbjct: 263 DQIYDLFAVRIIVDSIKDCYAALGIIHEIYKPIPGRFKDYIAMPKPNMYQSLHTTLVGKT 322
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT +MH AE+G AAHW+YKE G+ S +M W + +L WQ
Sbjct: 323 GTPFEIQIRTYDMHRTAEYGIAAHWKYKEASNGNIIKESEAEKM-SWLQQILDWQ 376
>gi|414079723|ref|YP_007001147.1| RelA/SpoT family protein [Anabaena sp. 90]
gi|413973002|gb|AFW97090.1| RelA/SpoT family protein [Anabaena sp. 90]
Length = 757
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 217/357 (60%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ+R SG+PY+ H V A +L +G + ++AAGLLHD ++D ++
Sbjct: 43 LICRAFQFAYELHGGQIRKSGEPYIAHPVAVAEILRELGGSPAMIAAGLLHDVVEDTEVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 SEDIEARFGAEVRLLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + RQR A+ET +IF PLANRLGI K +LE+L FK+L P+ +
Sbjct: 157 KLADRLHNMRTLQYMSEASRQRSAQETRDIFAPLANRLGIWQIKWELEDLAFKYLEPEAY 216
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E + E E + A + L + L ++ L + GR K LYSI+ KM +++
Sbjct: 217 RETQQCVAEKRTAREEKLLKATDTLRRRLLKAGVNCLEISGRPKHLYSIYQKMQRQQKEF 276
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 HEIYDLAALRIIVQTNEECYRALAVVHDSFRPIPGRFKDYIGLPKPNHYQSLHTGVIGLT 336
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE ++ V E W R +L WQ +
Sbjct: 337 GRPLEVQIRTLEMHHIAEYGIAAHWKYKETGGSENTPVTSTDEKFTWLRQLLDWQSD 393
>gi|94499848|ref|ZP_01306384.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Bermanella marisrubri]
gi|94428049|gb|EAT13023.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Oceanobacter sp. RED65]
Length = 710
Score = 282 bits (722), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 153/357 (42%), Positives = 224/357 (62%), Gaps = 15/357 (4%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+Y AE+AH GQ R SGDPY++H + A +L+ + +S + A +LHD ++D +
Sbjct: 23 VCRAYYYAEQAHEGQFRRSGDPYIVHPLAVANILSEMHMDSQSLMAAMLHDVIEDTAVPK 82
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + FG V++LV+GVSKL+ + ++E +A M +AMA D R +L+K
Sbjct: 83 DALKDQFGETVSELVDGVSKLTHIKFESQEEK------QAGNFQKMAMAMAKDIRVILVK 136
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P K++R A ETLEI+ P+ANRLGIS +++LE+LCF +P +
Sbjct: 137 LADRLHNMRTLSAMPPEKKRRIAGETLEIYAPIANRLGISNIRIELEDLCFNAKHP-MRS 195
Query: 380 ELSSKLVECFDEAMVTSAIEKLEQALK----DKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ K V+ + +EK+ QALK ++ + V+ GR K LYSI+ KM ++K +
Sbjct: 196 NMIKKAVKSA-RGNRSELVEKINQALKTRLKEEGLKTRVM-GREKHLYSIYRKMKEQKKS 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+I D+YG R+IV+N + CY+AL +VH + VPG+ KDYI PK NGYQSLHT V G
Sbjct: 254 FKQIMDVYGFRIIVDNVDSCYRALGIVHNFYKPVPGRFKDYIAIPKSNGYQSLHTTVVGV 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEA 551
G V +E+QIRT+EM A G AAHW YK+ + Q ++ + +W + +L Q A
Sbjct: 314 GGVHIEIQIRTEEMEAMAHNGIAAHWLYKDDNAQSEANGGKRARQWVQGLLELQQRA 370
>gi|317502040|ref|ZP_07960222.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
gi|316896514|gb|EFV18603.1| GTP diphosphokinase [Lachnospiraceae bacterium 8_1_57FAA]
Length = 774
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 247/416 (59%), Gaps = 26/416 (6%)
Query: 157 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 206
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 9 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 66
Query: 207 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 266
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 67 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 126
Query: 267 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 324
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 127 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 180
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 181 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 240
Query: 385 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 442
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 241 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDL 299
Query: 443 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 502
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+
Sbjct: 300 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEI 359
Query: 503 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDR 556
QIRT+EMH AE+G AAHW+YKEG S Q + W R +L WQ + MS +R
Sbjct: 360 QIRTEEMHKTAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNR 414
>gi|295108479|emb|CBL22432.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus obeum A2-162]
Length = 789
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/364 (41%), Positives = 232/364 (63%), Gaps = 15/364 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +++
Sbjct: 77 MIQKAYEVASDAHKDQKRKSGEPYIIHPLCVAIILADLELDKETIVAGLLHDAVEDTWMT 136
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ + + F A VA LV+GV+KL QLS +A K ++A+ L MFLAMA D R +L
Sbjct: 137 TEEVEKEFSAEVALLVDGVTKLGQLS------YSADKVELQAENLRKMFLAMAKDIRVIL 190
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+Q A+ET++I+ P+A RLGIS KV+L++L K+L PD
Sbjct: 191 IKLADRLHNMRTLQYMRPEKQQEKARETMDIYAPIAMRLGISKIKVELDDLSLKYLKPDV 250
Query: 378 HTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L +K L + + V + +++++Q + + I V GR K +SI+ KM+ + T
Sbjct: 251 YYDLVNKVALRKSERQEFVNNIVKQVKQHMDEAAIKAQV-DGRIKHFFSIYKKMVNQDKT 309
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 310 IDQIYDLFAVRILVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGP 369
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEAM 552
P E+QIRT EMH AE+G AAHW+YKE G + + W R +L WQ + M
Sbjct: 370 NGQPFEIQIRTFEMHKTAEYGIAAHWKYKESSDGKVPVDKREEEKLNWLRQILEWQRD-M 428
Query: 553 SKDR 556
S +R
Sbjct: 429 SDNR 432
>gi|395242383|ref|ZP_10419380.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
gi|394480115|emb|CCI85620.1| GTP diphosphokinase [Lactobacillus pasteurii CRBIP 24.76]
Length = 743
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/331 (44%), Positives = 208/331 (62%), Gaps = 10/331 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVKKAYNYANKAHEGQTRASGQPYIIHPTQVAGTLANLGLDQDTIAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDDIKKEFGEDVAFIVDGVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNPD +
Sbjct: 141 KLADRLHNMHTLNHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPDAY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ S L E+ + I L++ L I + V GR K +YSI+ KM+ K
Sbjct: 201 YRIVSLMDLKRSERESYIAETISVLKKTLDSLGIKYEVY-GRPKHIYSIYKKMVDKHKDF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V+N DCY L VH W +PG+ KDYI PK NGYQSLHT + G G
Sbjct: 260 NEIYDLLAVRVLVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPG 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 320 GKPLEIQIRTEQMHQVAEYGVAAHWAYKRGN 350
>gi|333371965|ref|ZP_08463903.1| GTP diphosphokinase [Desmospora sp. 8437]
gi|332975146|gb|EGK12048.1| GTP diphosphokinase [Desmospora sp. 8437]
Length = 737
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 234/393 (59%), Gaps = 14/393 (3%)
Query: 163 DELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDF--VIKAFYEAERAHRGQMRASG 220
D + N + ++ G + +E L A H + +ED V KA+ A AHRGQ R SG
Sbjct: 5 DNIRKNYFNYMILGEWDMPIEELLDEA--GHYLNKEDLEQVEKAYLFAAEAHRGQTRKSG 62
Query: 221 DPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSK 280
+ Y+ H V A +LA + ++T + + +LHD ++D + + + FG VA +V+G++K
Sbjct: 63 EEYIHHPVAVAGILAELQMDATTLISAILHDVVEDTGATLETVEAEFGETVAQIVDGLTK 122
Query: 281 LSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQ 339
L Q K +TA E R MF+AMA D R +LIKLADRLHNM TL LP KR+
Sbjct: 123 LKQRMKY---KSTAEHQAENHR--KMFVAMAQDIRVILIKLADRLHNMRTLKYLPEAKRR 177
Query: 340 RFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSA 397
R AKETLEIF PLA+RLGIST K +LE+ ++LNP Q+ + + K E +
Sbjct: 178 RIAKETLEIFAPLAHRLGISTIKWELEDSSLRNLNPQQYYRIVNLMKQKRAEREKYLDEV 237
Query: 398 IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQ 457
I + + L+ N+S + GR K +YSI+ KM+K +EI+D+ +R+IV++ DCY
Sbjct: 238 IATIRERLEGMNLSADI-SGRPKHIYSIYRKMVKDHKQFNEIYDLLAVRVIVDSIRDCYA 296
Query: 458 ALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGF 517
L ++H +W +PG+ KDYI PK N YQSLHT V G P+EVQIRT+EMH AE+G
Sbjct: 297 VLGIIHTIWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKGEPIEVQIRTREMHRIAEYGI 356
Query: 518 AAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
AAHW YKEG SF + +++ R +L Q E
Sbjct: 357 AAHWAYKEGAQIEGSFN-EKLKFFREILEMQQE 388
>gi|422845570|ref|ZP_16892280.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684220|gb|EGD26396.1| GTP diphosphokinase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 753
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 154/337 (45%), Positives = 206/337 (61%), Gaps = 18/337 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEEFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLRPDKQRRIAAETLDIYAPLADRLGIGTIKWELEDMSFHYMNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E K+V D E + AI+ L L I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYKIVSMMDAKRSEREDYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 352
>gi|406915627|gb|EKD54692.1| hypothetical protein ACD_60C00057G0017 [uncultured bacterium]
Length = 720
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/346 (42%), Positives = 213/346 (61%), Gaps = 9/346 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A++AH GQ R +G+PY+ H V A +LA + + + A +LHD ++D +
Sbjct: 25 EAYVLAKKAHEGQKRHTGEPYITHPVAVAQILATMRMDPPTIIAAILHDVIEDTSVEKPD 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VADLV+GV+KL+Q+ +R +A+ M +AMA D R +L+K+A
Sbjct: 85 LIEKFGKEVADLVDGVTKLTQMEFESRAQ------AQAENFRKMIMAMARDIRVILVKIA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+D LPL KR+R AKETLEIF P+ANRLG+ ++++ E+L F L P ++ L
Sbjct: 139 DRLHNMKTIDCLPLEKRRRIAKETLEIFAPIANRLGMHAFRIEFEDLGFSALYPMRYRIL 198
Query: 382 SSKLVECF-DEAMVTSAIEK-LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S + + + I+K + +LK NI L GR K +YSI+ KM +K L+ E+
Sbjct: 199 KSAVSKALGSRHEILELIDKEIRNSLKKTNIPIRFLTGREKHIYSIYKKMHEKHLSFSEV 258
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+YG R+IV+ + CY+ L V+H L+ + + KDYI PK NGYQSLHTV+ G VP
Sbjct: 259 MDVYGFRVIVDKLDTCYRVLGVLHNLYKPLTQRFKDYIAIPKANGYQSLHTVLFGPYGVP 318
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 545
+EVQIRT+EMH AE+G +AHW YK L+ EW + V+
Sbjct: 319 IEVQIRTEEMHKMAEYGISAHWLYKTEKSVFGEAQLRAKEWLKGVM 364
>gi|238925277|ref|YP_002938794.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
gi|238876953|gb|ACR76660.1| (p)ppGpp synthetase I, SpoT/RelA [Eubacterium rectale ATCC 33656]
Length = 786
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/361 (40%), Positives = 221/361 (61%), Gaps = 13/361 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH+GQ R SG+PY++H + A++LA + + +AAGLLHD L+D ++
Sbjct: 57 LVDKAYRVAYDAHKGQARKSGEPYIIHPLCVAIILAELELDKETIAAGLLHDVLEDTIMT 116
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQL-----SKLARENNTASKTVEADRLHTMFLAMA-DA 313
D + FG VA LV+GV+KL L +K ++ N ++A+ L MFLAMA D
Sbjct: 117 MDEMRAEFGDDVAHLVDGVTKLKHLHLTDSTKDPKDKNADRLEMQAENLRKMFLAMAKDI 176
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R +LIKLADRLHNM TL +QR A+ET +I+ P+A RLGIS K++LE+LC K+L
Sbjct: 177 RVILIKLADRLHNMRTLKYQSKEAQQRIARETQDIYCPIAQRLGISKIKIELEDLCMKYL 236
Query: 374 NPDQHTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
PD + +L K L + + + + +++ + D I + GR K +SI+ KM+
Sbjct: 237 YPDAYYDLVEKVALRKTERDTYIQGLVNDVKKYVSDAGIKAEIY-GRAKHFFSIYKKMVN 295
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+ T+D+I+D++ +R++V+ DCY L ++H+ + +PG+ KDYI PK N YQSLHT
Sbjct: 296 QDKTIDQIYDLFAIRILVDTIPDCYAVLGIIHEKYKPIPGRFKDYIAMPKQNMYQSLHTT 355
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM----VEWARWVLTW 547
+ G P E+QIRT EMH AE+G AAHW+YKE + +++ + W R +L W
Sbjct: 356 LIGPSGQPFEIQIRTYEMHRTAEYGIAAHWKYKETNNGNATTTTVTEEEKLSWLRQILEW 415
Query: 548 Q 548
Q
Sbjct: 416 Q 416
>gi|160878706|ref|YP_001557674.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium phytofermentans ISDg]
gi|160427372|gb|ABX40935.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium phytofermentans ISDg]
Length = 813
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 230/356 (64%), Gaps = 13/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A AH+ Q+R SG+PY++H + A++LA + + + AG+LHD ++D L
Sbjct: 98 EIVEKAYKIATFAHKDQLRKSGEPYIIHPLCVAIILAELELDKETIVAGILHDVVEDTVL 157
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + + FG VA LV+GV+KL+QL N + K ++A+ L MFLAMA D R +
Sbjct: 158 TVSELTKEFGEEVALLVDGVTKLTQL------NYSKDKVEIQAENLRKMFLAMAKDIRVI 211
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM T+ K+ ++ET++I+ P+A RLGIS K++L++L ++L P+
Sbjct: 212 LIKLADRLHNMRTMQYQTPKKQIEKSRETMDIYAPIAQRLGISMIKIELDDLSLQYLEPE 271
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ EL+ K+ +E A + S +E + + + + NIS + GR K +SI+ KM+ +
Sbjct: 272 VYKELNEKIASKKEEREAFINSIVEDVGKHIAEANISAKI-DGRVKHFFSIYKKMVNQGK 330
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+++I+D++ +R++V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 331 TLEQIYDLFAVRIVVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIG 390
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQM-VEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKEG D +++ + + W R +L WQ
Sbjct: 391 PNGQPFEIQIRTFEMHRTAEYGIAAHWKYKEGHDGKNTRDTEEAKLTWLRQILEWQ 446
>gi|294101598|ref|YP_003553456.1| (p)ppGpp synthetase I SpoT/RelA [Aminobacterium colombiense DSM
12261]
gi|293616578|gb|ADE56732.1| (p)ppGpp synthetase I, SpoT/RelA [Aminobacterium colombiense DSM
12261]
Length = 734
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 163/356 (45%), Positives = 222/356 (62%), Gaps = 18/356 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A AH Q R+SGDPY++H + A +LA + + + A LLHD L+D LS +
Sbjct: 43 EAFVMAADAHGEQKRSSGDPYVVHSINVASILADMQLDLVTLIAALLHDVLEDTALSAEK 102
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V LV+GV+KL +L + E+ +A+ L MF+ MA D R VLIKLA
Sbjct: 103 VKSAFGDDVITLVDGVTKLGKLPFKSFED------YQAENLRKMFVVMAKDIRVVLIKLA 156
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL AL K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +PD + E+
Sbjct: 157 DRLHNMRTLGALRRDKQLRIAKETLEIYAPLAHRLGIYQVKRGLEDLAFKYSDPDMYYEI 216
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + EA++ AIE L+ LK ++I F V GR K YSI+ KM +KKL ++++
Sbjct: 217 RRRVRKKLPEREAIIKKAIEILQDRLKQESIHFKV-KGRAKHFYSIYEKMNRKKLPVEQL 275
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR++V++ CY L +VH +W +PG+ DYI PK N YQSLHT V G P
Sbjct: 276 YDLLALRVVVDDVAACYTVLGIVHTIWKPIPGQFDDYIANPKTNMYQSLHTTVVGPTGEP 335
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
LEVQIR+ EM+ AE+G AAHWRYKEG VL ++ AR LTW +A+ D
Sbjct: 336 LEVQIRSAEMNRLAEYGIAAHWRYKEG-----GNVLDDLD-AR--LTWIRQALEGD 383
>gi|325846553|ref|ZP_08169468.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481311|gb|EGC84352.1| GTP diphosphokinase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 726
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 224/358 (62%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ AE HRGQ R SG+ Y +H + A ++ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFAEYHHRGQKRNSGEDYFIHPIAVATTISNMQLDDQTICAGLMHDVLEDTPV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S D + FG + LV+GV+KL +L+ RE +A+ + M LAM+ D R +L
Sbjct: 86 SKDQMRDLFGEEITFLVDGVTKLKKLNYKTREEK------QAENIRKMVLAMSNDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ K+++ A ETLEI+VPLA+RLGI T K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYKTEKKQKQTASETLEIYVPLAHRLGIYTMKWELEDLCFRYQKPEE 199
Query: 378 HTELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ EL+ +K E E + I+ L+++L I++ + GR K L+SI+ KM + K
Sbjct: 200 YYELAQMVHNKRRE--RENYINEIIDTLDKSLSSSKINYEI-SGRPKGLFSIYKKMSRNK 256
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ +EI+D+ +R++V+ DCY+ L VH +W +P ++KDYI +PK NGY+SLHT V
Sbjct: 257 IEFNEIYDLTAVRVLVDTVADCYEVLGKVHSIWRPIPNRIKDYIGQPKPNGYRSLHTTVF 316
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G P EVQIRT++MH + E+G AAHW+YKE + + F ++ + R ++ WQ E
Sbjct: 317 GADSKPFEVQIRTRQMHYECEYGIAAHWKYKENKSKSTEFDEKLT-FIRQIMEWQKEG 373
>gi|404328487|ref|ZP_10968935.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 724
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 225/356 (63%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A++AH GQ+R SG+PY+ H VE A +L + + T + +G LHD ++D +
Sbjct: 20 ELIKKAYEYAKKAHAGQLRKSGEPYITHPVEVAGILVNLKMDVTTIMSGFLHDVVEDTPV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA LV+GV+KL ++E+ +A+ MF+AMA D R V+
Sbjct: 80 TLDDVRNEFGDNVAMLVDGVTKLRHFEYSSKEDQ------QAENHRKMFVAMARDLRCVI 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + K+ + A ET+EIF PLANRLGIS K +LE++ ++LNP Q
Sbjct: 134 VKLADRLHNMRTLKYMTKEKQIQKANETMEIFAPLANRLGISAIKWELEDISLRYLNPQQ 193
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + + + +E A + +E L++ +K +I + GR K +YSI+ KM+ +
Sbjct: 194 YYKIVNLMKQKREEREAYIAQVVEDLKKYVKSVHIKAEI-SGRPKHIYSIYRKMVNQHKQ 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D++ +R+IVE+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FNEIYDLFAVRIIVESIKDCYAILGIIHTHWKPMPGRFKDYIAMPKANMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCE 550
PLEVQ+RT+EMH AE+G AAHW YKEG ++ + + + W R +L +Q E
Sbjct: 313 KGDPLEVQVRTEEMHDVAEYGIAAHWAYKEGKTKNINNKFEDKLTWFREILEYQKE 368
>gi|159037429|ref|YP_001536682.1| (p)ppGpp synthetase I SpoT/RelA [Salinispora arenicola CNS-205]
gi|157916264|gb|ABV97691.1| (p)ppGpp synthetase I, SpoT/RelA [Salinispora arenicola CNS-205]
Length = 827
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 218/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 125 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 184
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 185 MRTDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 236
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 237 DRLHNMRTLIFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEI 296
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ +K+ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 297 NRLIGEHQPQREALLRQVTKKVGTDLKAAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDI 355
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 356 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 415
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 416 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 470
>gi|331090444|ref|ZP_08339325.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336440256|ref|ZP_08619849.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
gi|330401191|gb|EGG80784.1| hypothetical protein HMPREF1025_02908 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336013722|gb|EGN43596.1| hypothetical protein HMPREF0990_02243 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 767
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 160/416 (38%), Positives = 247/416 (59%), Gaps = 26/416 (6%)
Query: 157 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 206
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 2 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 59
Query: 207 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 266
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 60 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 119
Query: 267 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 324
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 120 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 173
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 174 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 233
Query: 385 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 442
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 234 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKVY-GRVKHFFSIYKKMVNQNKTLDQVYDL 292
Query: 443 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 502
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+
Sbjct: 293 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEI 352
Query: 503 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDR 556
QIRT+EMH AE+G AAHW+YKEG S Q + W R +L WQ + MS +R
Sbjct: 353 QIRTEEMHKTAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNR 407
>gi|38233953|ref|NP_939720.1| GTP pyrophosphokinase [Corynebacterium diphtheriae NCTC 13129]
gi|376293379|ref|YP_005165053.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC02]
gi|38200214|emb|CAE49898.1| GTP pyrophosphokinase [Corynebacterium diphtheriae]
gi|372110702|gb|AEX76762.1| GTP pyrophosphokinase [Corynebacterium diphtheriae HC02]
Length = 759
Score = 282 bits (722), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHDGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|291522836|emb|CBK81129.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus catus GD/7]
Length = 770
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 222/358 (62%), Gaps = 21/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH+GQ+R SG+PY++H + A++LA + + + GLLHD ++D ++ +
Sbjct: 54 KAYNIANNAHKGQLRKSGEPYIIHPLCVALILADLELDKETIVGGLLHDVVEDTIMTEED 113
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R F A +A +V GV+KL QLS + ++A+ L MFLAMA D R +LIKLA
Sbjct: 114 ITREFSAEIALIVSGVTKLGQLSY-----SKDKVEIQAENLRKMFLAMAKDIRVILIKLA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++ A+ET++I+ P+A RLGIS K++L++L ++L P+ + +L
Sbjct: 169 DRLHNMRTLKYMTPAKQKEKARETMDIYAPIAQRLGISKIKIELDDLSLRYLEPEVYYDL 228
Query: 382 SSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + L +A V + +E++ Q + I V GR K +SI+ KM+ + T+DEI
Sbjct: 229 ARQINLKRSERQAFVDAIVEEVSQHMAQSGIKAQV-NGRVKHFFSIYKKMVNQDKTLDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV+ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 288 YDLFAVRIIVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGPNGQP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEG-------DCQHSSFVLQMVEWARWVLTWQCE 550
E+QIRT +MH AE+G AAHW+YKE D + + W R +L WQ +
Sbjct: 348 FEIQIRTFDMHRTAEYGIAAHWKYKEDPNAKNVEDSEEAKLT-----WLRQILEWQTD 400
>gi|331090638|ref|ZP_08339489.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330401078|gb|EGG80673.1| hypothetical protein HMPREF9477_00132 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 766
Score = 282 bits (721), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/371 (40%), Positives = 229/371 (61%), Gaps = 14/371 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ AH GQ+R SG+ Y++H ++LA + + +AAG+LHD ++D ++
Sbjct: 53 LIEKAYRIAKEAHEGQVRKSGEAYIIHPTWVGLILADLELDKETIAAGILHDVVEDTVMT 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVL 317
+ I FG+ VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R +L
Sbjct: 113 EEEITEEFGSEVALLVDGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIL 166
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ A+ET++I+ P+A RLGIS K +L++L K+ PD
Sbjct: 167 IKLADRLHNMRTLQFMRPEKQKEKARETMDIYAPIAQRLGISKIKTELDDLALKYSQPDV 226
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+L +++ + E V +E++ +K+ NI V GR K +SI+ KM+ + T
Sbjct: 227 FYDLVNQINARKTEREEFVQQIVEEVSTHMKNANIKAEVY-GRVKHFFSIYKKMVNQDKT 285
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R+IV++ +DCY AL +H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 286 VDQIYDLFAIRIIVDSVKDCYAALGAIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGP 345
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAM 552
P E+QIRT EMH AE+G AAHW+YKE S + E W R +L WQ +
Sbjct: 346 AGQPFEIQIRTVEMHKTAEYGIAAHWKYKESGGSEKSVATRAEEKLSWLRQILEWQQDTD 405
Query: 553 SKDRSCVGNGD 563
+++ + GD
Sbjct: 406 NREFLSLLKGD 416
>gi|417001114|ref|ZP_11941028.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
gi|333975597|gb|EGL76476.1| GTP diphosphokinase [Veillonella parvula ACS-068-V-Sch12]
Length = 746
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 10/353 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V+KAF A++AH GQ RASG+PY++H + A +LA + + + A L+HD ++D
Sbjct: 40 DQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSY 99
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG+ VA LV+GV+KL+Q +E+ + + M LAMA D R V+
Sbjct: 100 SKEDLEEMFGSEVAFLVDGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVV 153
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL DRLHNM TL + K++R AKETLEIF PLA+RLGI K +LE+L F++L P++
Sbjct: 154 IKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEK 213
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ + E +V + +L +AL + +I + GR K YSI+ KM K
Sbjct: 214 YYDLVDQMKQKRQVREDIVNDTMSQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRD 272
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +I+D+ +R+IV++ DCY L + H LW +P + KDYI+ PK N YQSLHT V G
Sbjct: 273 LSQIYDLLAVRVIVDSIPDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGT 332
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH +E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 333 MGQPVEIQIRTWEMHRVSEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 385
>gi|332711840|ref|ZP_08431770.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
gi|332349168|gb|EGJ28778.1| (p)ppGpp synthetase, RelA/SpoT family [Moorea producens 3L]
Length = 754
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 160/356 (44%), Positives = 221/356 (62%), Gaps = 14/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H+GQ R SG+PY+ H V A LL +G NST++AAG LHD ++D ++
Sbjct: 41 LIAEAFKFAYQLHQGQSRKSGEPYIAHPVAVADLLRDLGGNSTMIAAGFLHDVVEDTEIT 100
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG V +LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 101 PEEIESRFGVEVRNLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVIV 153
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K+ + A+ET +IF PLANRLGI +K +LE+L FK+L D
Sbjct: 154 VKLADRLHNMRTLEYLKPQKQGQIAQETRDIFAPLANRLGIGCFKWELEDLAFKYLERDA 213
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ S + E E + E L + ++ + + + R K LY I+ KM ++
Sbjct: 214 YREIQSLVAERRSDREQRLKEVSELLRERIQKTGVHCVDISSRPKHLYGIYQKMQRQNKG 273
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI +R+IVE +E+CY+AL VVH L+ +PG+ KDYI PK N YQSLHT V G
Sbjct: 274 FHEIYDIAAMRVIVETKEECYRALAVVHDLFRPIPGRFKDYIGLPKPNRYQSLHTGVIGF 333
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 548
P+EVQIRT EMH AE+G AAHW+YKE G + F + + W R +L WQ
Sbjct: 334 NGRPIEVQIRTLEMHHVAEWGIAAHWKYKETGGSNTTKFTADDEKLTWLRQLLEWQ 389
>gi|117928545|ref|YP_873096.1| (p)ppGpp synthetase I SpoT/RelA [Acidothermus cellulolyticus 11B]
gi|117649008|gb|ABK53110.1| (p)ppGpp synthetase I, SpoT/RelA [Acidothermus cellulolyticus 11B]
Length = 820
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 217/357 (60%), Gaps = 17/357 (4%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE HRGQ+R SGDPY+ H + A +LA +G + A LLHDT++D +
Sbjct: 105 VQRAYEVAEFYHRGQLRRSGDPYITHPLAVATILAELGMTPPTIVAALLHDTVEDTTYTL 164
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + R FG VA LV+GV+KL R + TVE R M +AMA D R +++K
Sbjct: 165 DQLRRDFGDEVASLVDGVTKLD------RVKYGDAATVETVR--KMVVAMARDPRVLVLK 216
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL LP K++R A+ETLEI+ PLA+RLG++T K +LE+L F L P ++
Sbjct: 217 LADRLHNMRTLRYLPPEKQERKARETLEIYAPLAHRLGMNTLKWELEDLSFATLYPKRYE 276
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E++ + E + + + IE++ L+ I V GR K YSI+ KM+ +
Sbjct: 277 EIARLVAERAPSRDTYLANVIEQVSAQLRAAKIKATV-TGRPKHYYSIYQKMIVRGRDFA 335
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D+ G+R++V+ DCY AL ++H +W VPG+ KD+I PKFN YQSLHT V G
Sbjct: 336 DIYDLLGVRVLVDTVRDCYAALGIIHAMWNPVPGRFKDFIAMPKFNLYQSLHTTVIGPEG 395
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT MH +AE+G AAHW+YKE G S + W R +L WQ EA
Sbjct: 396 KPVEVQIRTHAMHRRAEYGIAAHWKYKEEATGSSTKGSG--NDMAWLRQLLDWQKEA 450
>gi|294794004|ref|ZP_06759141.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
gi|294455574|gb|EFG23946.1| GTP diphosphokinase [Veillonella sp. 3_1_44]
Length = 735
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 10/353 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V+KAF A++AH GQ RASG+PY++H + A +LA + + + A L+HD ++D
Sbjct: 29 DQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSY 88
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG+ VA LV+GV+KL+Q +E+ + + M LAMA D R V+
Sbjct: 89 SKEDLEEMFGSEVAFLVDGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVV 142
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL DRLHNM TL + K++R AKETLEIF PLA+RLGI K +LE+L F++L P++
Sbjct: 143 IKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEK 202
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ + E +V + +L +AL + +I + GR K YSI+ KM K
Sbjct: 203 YYDLVDQMKQKRQVREDIVNDTMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRD 261
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +I+D+ +R+IV++ DCY L + H LW +P + KDYI+ PK N YQSLHT V G
Sbjct: 262 LSQIYDLLAVRVIVDSIPDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGT 321
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH +E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 322 MGQPVEIQIRTWEMHRVSEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 374
>gi|330466917|ref|YP_004404660.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
gi|328809888|gb|AEB44060.1| RelA/SpoT family protein [Verrucosispora maris AB-18-032]
Length = 823
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 217/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRTDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ +K++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVQTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 411
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 412 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|189425343|ref|YP_001952520.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter lovleyi SZ]
gi|189421602|gb|ACD96000.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter lovleyi SZ]
Length = 716
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 222/356 (62%), Gaps = 13/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ + H+GQ R SG+PY++H +E A LLA + + + G LHDT++D
Sbjct: 21 NLIRKAYVYCAKVHQGQTRLSGEPYIIHPLEVAGLLAGLKLDVPSIVTGFLHDTIEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG VA+LV+GV+K+S++ +E N +A+ M +AMA D R +L
Sbjct: 81 TSEELAEMFGKEVAELVDGVTKISKIHFKTKEEN------QAENFRKMLIAMANDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ ++ET++I+ P+A+RLGIS K +LE+L F++L PD
Sbjct: 135 VKLADRLHNMRTLQFQPDTKQRSISRETMDIYAPIAHRLGISWIKTELEDLSFRYLQPDV 194
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVL---CGRHKSLYSIHCKMLKKKL 434
+ +L++K+ E S I ++++A++ K + ++ GR K LYSI+ KM K+K+
Sbjct: 195 YFDLATKIQRKKQER--ESFIHEIQEAIRQKLVEHQIVGEVSGRSKHLYSIYRKMEKRKV 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ LR++V++ + CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 DFEEIYDLTALRILVDDIKSCYEVLGLIHSSWRPIPGRFKDYIAMPKGNMYQSLHTTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 313 PHGDRMEVQIRTHEMHRVAEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|427706762|ref|YP_007049139.1| (p)ppGpp synthetase I SpoT/RelA [Nostoc sp. PCC 7107]
gi|427359267|gb|AFY41989.1| (p)ppGpp synthetase I, SpoT/RelA [Nostoc sp. PCC 7107]
Length = 756
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 159/357 (44%), Positives = 216/357 (60%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H GQ R SG+PY+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 42 LICRAFTFAYQLHHGQFRKSGEPYICHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG+ V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 102 IEEIEELFGSEVRLLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 154
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 155 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWHIKWELEDLAFKYLEPEA 214
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++ + E E + A E L + L I L + GR K LYSI+ KM +++
Sbjct: 215 FRQMQQHVSEKRTAREEKLAKATEILRERLPHAGIHCLDISGRPKHLYSIYQKMQRQQKE 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 FHEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
PLE+QIRT EMH AE+G AAHW+YKE +S F + W R +L WQ +
Sbjct: 335 TGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGGSNSQFTASDEKFTWLRQLLEWQSD 391
>gi|19552864|ref|NP_600866.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Corynebacterium glutamicum ATCC 13032]
gi|145295774|ref|YP_001138595.1| hypothetical protein cgR_1699 [Corynebacterium glutamicum R]
gi|417970606|ref|ZP_12611537.1| hypothetical protein CgS9114_06250 [Corynebacterium glutamicum
S9114]
gi|418244314|ref|ZP_12870737.1| hypothetical protein KIQ_02373 [Corynebacterium glutamicum ATCC
14067]
gi|21903460|sp|O87331.2|RELA_CORGL RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|21324422|dbj|BAB99046.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases
[Corynebacterium glutamicum ATCC 13032]
gi|140845694|dbj|BAF54693.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344044902|gb|EGV40576.1| hypothetical protein CgS9114_06250 [Corynebacterium glutamicum
S9114]
gi|354511720|gb|EHE84626.1| hypothetical protein KIQ_02373 [Corynebacterium glutamicum ATCC
14067]
gi|385143771|emb|CCH24810.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Corynebacterium glutamicum K051]
Length = 760
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 223/355 (62%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G +R SGDPY+ H + A + A IG ++T + A LLHDT++D S D
Sbjct: 57 RAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEI 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I+++ L++ NI+ VL GR K +SI+ KM+ + D+I
Sbjct: 229 VRLVADRAPSRDRYLKEIIDQVTGGLRENNIAAEVL-GRPKHYWSIYQKMIVRGRDFDDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G P
Sbjct: 288 FDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 551
LEVQ RT +MH AEFG AAHWRYKE HS + V QM W R +L WQ EA
Sbjct: 348 LEVQARTHDMHYNAEFGIAAHWRYKETKGSHSGEQAEVDQMA-WMRQLLDWQKEA 401
>gi|124024494|ref|YP_001018801.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Prochlorococcus marinus str. MIT 9303]
gi|123964780|gb|ABM79536.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. MIT 9303]
Length = 753
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 158/347 (45%), Positives = 211/347 (60%), Gaps = 11/347 (3%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQ RASGDPY++H V A LL IGA+++V+AAG LHD ++D L+ + + FGA V
Sbjct: 57 HEGQFRASGDPYIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTDLTPEQLEDYFGAEV 116
Query: 272 ADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTL 330
+LVEGV+KL + N T +A+ L MFLAMA D R VL+KLADRLHNM TL
Sbjct: 117 RELVEGVTKLGGI------NFTNHTEAQAENLRKMFLAMASDIRVVLVKLADRLHNMRTL 170
Query: 331 DALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--EC 388
+L K+QR A+ET EI+ PLANRLGI +K +LE+L FK L P+ E+ ++
Sbjct: 171 GSLQADKQQRIARETREIYAPLANRLGIGRFKWELEDLAFKLLEPEAFREIQQEVATKRS 230
Query: 389 FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLI 448
E + + +E L + L + + GR K LY I KM +++ EI D+ LR+I
Sbjct: 231 ERENRLATTVELLTERLAAAGLDACEVSGRPKHLYGIWSKMQRQQKAFHEIFDVAALRII 290
Query: 449 VENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKE 508
+ E CY+AL VVH + +PG+ KDYI K NGYQSLHT V G+ P+EVQIRT
Sbjct: 291 APSVETCYRALAVVHDTFRPIPGRFKDYIGLAKPNGYQSLHTAVIGKHR-PIEVQIRTPG 349
Query: 509 MHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
MH +EFG AAHW YKEG ++ + W R ++ WQ E + D
Sbjct: 350 MHRVSEFGIAAHWEYKEGGSPAAANK-ERFNWLRQLVEWQQEGGNDD 395
>gi|421130113|ref|ZP_15590310.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
gi|410358572|gb|EKP05728.1| putative GTP diphosphokinase [Leptospira kirschneri str.
2008720114]
Length = 674
Score = 282 bits (721), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|428313851|ref|YP_007124828.1| RelA/SpoT family (p)ppGpp synthetase [Microcoleus sp. PCC 7113]
gi|428255463|gb|AFZ21422.1| (p)ppGpp synthetase, RelA/SpoT family [Microcoleus sp. PCC 7113]
Length = 751
Score = 282 bits (721), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 156/357 (43%), Positives = 221/357 (61%), Gaps = 14/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + +AF A + H GQ+RASG+PY+ H V A LL +G +S ++AAG LHD ++D +
Sbjct: 38 NLISRAFEFAYKLHEGQLRASGEPYIAHPVAVAGLLRDLGGSSVMIAAGFLHDVVEDTDV 97
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R +
Sbjct: 98 TPEEIESRFGVEVRRLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAADIRVI 150
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ L K++ ++ET EIF PLANRLGI K +LE+L FK+L P+
Sbjct: 151 VVKLADRLHNMRTLEHLNPQKQRSISQETREIFAPLANRLGIGRVKWELEDLAFKYLEPE 210
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ + E E ++ + L + L+ I L + GR K LY I+ KM +++
Sbjct: 211 SYRQMQQLVAERRTDRETRLSKVGDILRERLESTEIHCLEISGRPKHLYGIYQKMQRQQK 270
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +RLI++ +EDCY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 271 GFHEIYDLAAMRLILQTKEDCYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVMG 330
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 548
P+EVQIRT EMH AE+G AAHW+YKE ++ + E W R +L WQ
Sbjct: 331 PSGRPIEVQIRTLEMHHIAEYGIAAHWKYKESGGSSNNRISAEDEKFTWLRQLLEWQ 387
>gi|294792133|ref|ZP_06757281.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
gi|294457363|gb|EFG25725.1| GTP diphosphokinase [Veillonella sp. 6_1_27]
Length = 735
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 218/353 (61%), Gaps = 10/353 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V+KAF A++AH GQ RASG+PY++H + A +LA + + + A L+HD ++D
Sbjct: 29 DQVLKAFELADKAHEGQFRASGEPYIMHPLAVADILAHLQIDHITLMAALMHDVVEDTSY 88
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG+ VA LV+GV+KL+Q +E+ + + M LAMA D R V+
Sbjct: 89 SKEDLEEMFGSEVAFLVDGVTKLNQFQYETKEDR------QMENYRKMILAMAKDVRVVV 142
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL DRLHNM TL + K++R AKETLEIF PLA+RLGI K +LE+L F++L P++
Sbjct: 143 IKLGDRLHNMRTLKHMRSDKQKRIAKETLEIFAPLAHRLGIFNVKWELEDLSFRYLEPEK 202
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ + E +V + +L +AL + +I + GR K YSI+ KM K
Sbjct: 203 YYDLVDQMKQKRQVREDIVNDTMRQLTKALSEAHIKADI-KGRPKHFYSIYKKMKKDNRD 261
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +I+D+ +R+IV++ DCY L + H LW +P + KDYI+ PK N YQSLHT V G
Sbjct: 262 LSQIYDLLAVRVIVDSIPDCYAVLGIAHSLWKPLPYRFKDYISMPKSNMYQSLHTTVIGT 321
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT EMH +E+G AAHWRYKEG+ Q V W R VL WQ
Sbjct: 322 MGQPVEIQIRTWEMHRVSEYGVAAHWRYKEGNKNGDKEFDQKVAWLRQVLEWQ 374
>gi|398338439|ref|ZP_10523142.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
kirschneri serovar Bim str. 1051]
gi|418676031|ref|ZP_13237317.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|418688085|ref|ZP_13249242.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418695002|ref|ZP_13256028.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|418739479|ref|ZP_13295863.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421089191|ref|ZP_15550005.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|421106960|ref|ZP_15567521.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|400323796|gb|EJO71644.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|409957161|gb|EKO16076.1| putative GTP diphosphokinase [Leptospira kirschneri str. H1]
gi|410002142|gb|EKO52665.1| putative GTP diphosphokinase [Leptospira kirschneri str. 200802841]
gi|410007974|gb|EKO61652.1| putative GTP diphosphokinase [Leptospira kirschneri str. H2]
gi|410737509|gb|EKQ82250.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410753279|gb|EKR10248.1| putative GTP diphosphokinase [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 674
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|390559275|ref|ZP_10243626.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
gi|390174152|emb|CCF82919.1| GTP pyrophosphokinase [Nitrolancetus hollandicus Lb]
Length = 721
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 222/357 (62%), Gaps = 7/357 (1%)
Query: 201 VIKAFYEAER-AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V+K ++ R AH G+ R SG+PY+ H VE A++LA + + +AA LLHD ++D +
Sbjct: 16 VVKQAHDFARDAHEGKFRRSGEPYISHPVEVAIILAEMQLDQETLAAALLHDVVEDTDTT 75
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTA-SKTVEADRLHTMFLAMAD-ARAVL 317
+ + FG + LV+GV+KL ++ A ++ K +A+ L MFLAM D R VL
Sbjct: 76 MEDLRTLFGDRIVRLVDGVTKLGRIRWAAETDHAVREKERQAESLRKMFLAMVDDVRVVL 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ +P K+ R AKET+EI+ PLANRLGI K +LE+L ++++P
Sbjct: 136 IKLADRLHNMRTLEHMPRAKQLRSAKETMEIYAPLANRLGIWQIKSELEDLALRYVDPQT 195
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + L + + S I +L + L+D I + GR K + SI KM +K+ +
Sbjct: 196 YFTIERALERRGTDRDQYLESVIAELSRTLEDAGIGAEI-SGREKHITSIARKMERKERS 254
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ G+R+IV+ ++DCY AL V+H +W +PG+ DY+ PK + YQS+HTVV G
Sbjct: 255 FDEIYDVLGIRVIVDEKKDCYGALGVIHSIWHPIPGEFDDYVATPKESMYQSIHTVVLGP 314
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 552
PLE+QIRT EMH AE+G AAHWRYKEG + + V + W R V+ W+ E +
Sbjct: 315 NGHPLEIQIRTHEMHYIAEYGIAAHWRYKEG-SRPDANVEAKIAWLRQVMDWRDEVV 370
>gi|352684036|ref|YP_004896020.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
gi|350278690|gb|AEQ21880.1| GTP pyrophosphokinase [Acidaminococcus intestini RyC-MR95]
Length = 740
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 218/358 (60%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+FV +A+ A H Q RASG+PY++H + A +LA + + T +AA LHD ++D +
Sbjct: 28 EFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDV 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA LV+GV+KL ++ ++RE + + MFLAMA D R VL
Sbjct: 88 TLDQLTDIFGLEVAGLVDGVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVL 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM T+ +P K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P
Sbjct: 142 IKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQH 201
Query: 378 HTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL K+ EAMV A+++L D I + GR KS YSI+ KM K +
Sbjct: 202 YYELVEQVKVKRHEREAMVQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKS 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++V++ +DCY L +VH W +PG+ KDYI PK NGYQSLHT V
Sbjct: 261 INEIYDLLAVRVLVDSVKDCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTVVSS 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSS---FVLQMVEWARWVLTWQ 548
PLE+QIRT EMH +E+G AAHWRYKE G SS + + W R +L W
Sbjct: 321 SGQPLEIQIRTFEMHRISEYGVAAHWRYKESGGSNMPSSSDKSADEKMAWLRQLLDWH 378
>gi|322420743|ref|YP_004199966.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M18]
gi|320127130|gb|ADW14690.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M18]
Length = 716
Score = 281 bits (720), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 221/355 (62%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLKLDLPAVVTGLLHDTVEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+SK+ + E + V++ E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVAKKKQERESYVSTVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ +R+ V++ +CY+ L V+H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 IDEIYDLIAIRVSVDDIRECYEVLGVIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 YGERMEVQIRTVEMHRVAESGIAAHWKYKEGKGYDEKEVRRFT-WIRQLLEWQQE 367
>gi|220932056|ref|YP_002508964.1| (p)ppGpp synthetase I SpoT/RelA [Halothermothrix orenii H 168]
gi|219993366|gb|ACL69969.1| (p)ppGpp synthetase I, SpoT/RelA [Halothermothrix orenii H 168]
Length = 716
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 229/375 (61%), Gaps = 18/375 (4%)
Query: 177 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 236
NL KE+ N L + V +A+ A+ AH GQ R SG+P++ H + A +LA
Sbjct: 5 NLLLKIKEYTTNPDL-------ELVKRAYNFAKDAHEGQFRVSGEPFIEHPLGVACILAE 57
Query: 237 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 296
+ + ++A LLHD ++D ++ I FG +A LV+GV+KL++L ++E +
Sbjct: 58 LELDIISISAALLHDVVEDTSVTSKNIEEEFGDEIALLVDGVTKLTRLEFKSKEEH---- 113
Query: 297 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 355
+A+ L MFLAM+ D R VLIKLADRLHNM TL L K+ AKETLEI+ PLA+R
Sbjct: 114 --QAENLRKMFLAMSEDIRVVLIKLADRLHNMRTLRFLAKEKQVEKAKETLEIYAPLAHR 171
Query: 356 LGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFL 413
LG+S K +LE+L F+ ++ + E++ K+ + + + AI+ L L ++ I
Sbjct: 172 LGMSRLKWELEDLSFRFIDSKMYYEIAEKVAANRKQRIRDIKEAIKILNDKLGNQGI-LA 230
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
+ GR K LYSI+ KM +K++ +EI+D+ +R+IV + ++CY+ L +VH++W +PG+
Sbjct: 231 EIYGRPKHLYSIYQKMKRKEVDFNEIYDLTAIRIIVNSVKECYEVLGIVHEIWKPIPGRF 290
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKEG F
Sbjct: 291 KDYIAMPKSNMYQSLHTTVIGPKGDPLEVQIRTPEMHRTAEYGIAAHWKYKEGKTGKDDF 350
Query: 534 VLQMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 351 E-EKLSWLRQILEWQ 364
>gi|417002340|ref|ZP_11941729.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
gi|325479481|gb|EGC82577.1| GTP diphosphokinase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 726
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ E HRGQ R SG+ Y +H + A L+ + + + AGL+HD L+D ++
Sbjct: 27 LIKKAYDFGELHHRGQKRNSGEDYYIHPIAVAKKLSEMKLDDQTICAGLMHDVLEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG + LV+GV+KL L+ +RE +A+ + M +AM+ D R VLI
Sbjct: 87 RDQMAEVFGEEITFLVDGVTKLKNLNYTSREEK------QAENIRKMVMAMSNDVRVVLI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KL+DRLHNM TL+ + K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P+++
Sbjct: 141 KLSDRLHNMRTLEYMTRKKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEKY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL+ + EA + IE L ++L+ +I+F + GR KSLYSI+ KM + +
Sbjct: 201 YELAEMVNVKRREREAYINEIIESLSKSLEGTDINFEI-SGRPKSLYSINKKMQRNGIAF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V+ +CY L VH LW +P ++KDYI +PK NGY+SLHT V G+
Sbjct: 260 EEIYDLTAVRVLVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGDD 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P EVQIRT+ MH + E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 320 SRPFEVQIRTRTMHKECEYGVAAHWRYKENNNTQSDFDDAM-SFLRRIVEWQQEG 373
>gi|294828236|ref|NP_713265.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|417760220|ref|ZP_12408246.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|417765432|ref|ZP_12413394.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417768721|ref|ZP_12416648.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|417776288|ref|ZP_12424129.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|417785522|ref|ZP_12433226.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|418666430|ref|ZP_13227853.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418675521|ref|ZP_13236812.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|418682526|ref|ZP_13243741.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|418693250|ref|ZP_13254313.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|418705583|ref|ZP_13266447.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709158|ref|ZP_13269952.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418717424|ref|ZP_13277086.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|418723737|ref|ZP_13282571.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|418731431|ref|ZP_13289830.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|421116511|ref|ZP_15576896.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421119978|ref|ZP_15580292.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|421125931|ref|ZP_15586175.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135462|ref|ZP_15595584.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|293386086|gb|AAN50283.2| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. 56601]
gi|400325689|gb|EJO77963.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Kennewicki LC82-25]
gi|400352369|gb|EJP04565.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400356908|gb|EJP13066.1| putative GTP diphosphokinase [Leptospira interrogans str. FPW2026]
gi|409943787|gb|EKN89378.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000624]
gi|409949367|gb|EKN99344.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Pomona]
gi|409951387|gb|EKO05902.1| putative GTP diphosphokinase [Leptospira interrogans str. C10069]
gi|409962535|gb|EKO26269.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12621]
gi|410011971|gb|EKO70077.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410020359|gb|EKO87162.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410347064|gb|EKO97983.1| putative GTP diphosphokinase [Leptospira interrogans str. Brem 329]
gi|410436583|gb|EKP85695.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410573896|gb|EKQ36937.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000621]
gi|410577683|gb|EKQ45553.1| putative GTP diphosphokinase [Leptospira interrogans str.
2002000623]
gi|410757794|gb|EKR19401.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410764849|gb|EKR35552.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770494|gb|EKR45713.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410773963|gb|EKR53984.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 12758]
gi|410787021|gb|EKR80756.1| putative GTP diphosphokinase [Leptospira interrogans str. UI 08452]
gi|455665880|gb|EMF31366.1| putative GTP diphosphokinase [Leptospira interrogans serovar Pomona
str. Fox 32256]
gi|455791273|gb|EMF43089.1| putative GTP diphosphokinase [Leptospira interrogans serovar Lora
str. TE 1992]
gi|456825939|gb|EMF74313.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Canicola str. LT1962]
Length = 674
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|404371563|ref|ZP_10976867.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
gi|226912310|gb|EEH97511.1| RelA/SpoT family protein [Clostridium sp. 7_2_43FAA]
Length = 730
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 223/359 (62%), Gaps = 14/359 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ A AH+ Q R SG+PY+ H ++ A +LA +G +++ + AGLLHD ++D
Sbjct: 19 DIVKKAYDLACDAHKNQKRESGEPYITHPIDVAEILAEMGMDTSTIVAGLLHDVIEDTHY 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+YD I F VADLV+GV+KL ++ +E +AD + M LAMA D R ++
Sbjct: 79 TYDDIKNIFNEEVADLVQGVTKLGKIEYKTKEEQ------QADNVRKMLLAMAKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHN+ TL +P K+++ AKETL+I+ PLA+RLGIS K +LE+L F++L+ ++
Sbjct: 133 IKLADRLHNLRTLKFMPKEKQKQKAKETLDIYAPLAHRLGISKIKWELEDLAFRYLHEEE 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ E E + IE L L++ I + GR K YSI+ KM+ K +
Sbjct: 193 YYDLVKQIAEKRVERETYIAEIIEDLHNKLEESEIDSDI-DGRPKHFYSIYKKMINKNKS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+++I D+ +R++V +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 IEQIFDLTAIRILVNTVKDCYGVLGIVHTIYKPIPGRFKDYIAMPKPNMYQSLHTTVIGP 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ---HSSFVLQMVEWARWVLTWQCEA 551
E+QIRT EMH AE+G AAHW+YKEGD Q SF ++ W R +L WQ E
Sbjct: 312 QGKTFEIQIRTFEMHKTAEYGIAAHWKYKEGDTQEDKEKSFENKLA-WLRDMLEWQKET 369
>gi|62390535|ref|YP_225937.1| ppGpp synthetase, ppGpp pyrophosphorylase [Corynebacterium
glutamicum ATCC 13032]
gi|3599974|gb|AAC35494.1| GTP pyrophosphokinase [Corynebacterium glutamicum]
gi|41325873|emb|CAF20036.1| PPGPP SYNTHETASE, PPGPP PYROPHOSPHORYLASE [Corynebacterium
glutamicum ATCC 13032]
Length = 760
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 223/355 (62%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G +R SGDPY+ H + A + A IG ++T + A LLHDT++D S D
Sbjct: 57 RAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEI 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I+++ L++ NI+ VL GR K +SI+ KM+ + D+I
Sbjct: 229 VRLVADRAPSRDRYLKEIIDQVTGGLRENNIAAGVL-GRPKHYWSIYQKMIVRGRDFDDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G P
Sbjct: 288 FDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 551
LEVQ RT +MH AEFG AAHWRYKE HS + V QM W R +L WQ EA
Sbjct: 348 LEVQARTHDMHYNAEFGIAAHWRYKETKGSHSGEQAEVDQMA-WMRQLLDWQKEA 401
>gi|256619448|ref|ZP_05476294.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
gi|256598975|gb|EEU18151.1| RelA/SpoT protein [Enterococcus faecalis ATCC 4200]
Length = 737
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENYRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|45656898|ref|YP_000984.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|421087294|ref|ZP_15548135.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
gi|421102246|ref|ZP_15562852.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45600135|gb|AAS69621.1| guanosine polyphosphate pyrophosphohydrolases/synthetases
[Leptospira interrogans serovar Copenhageni str. Fiocruz
L1-130]
gi|410367953|gb|EKP23335.1| putative GTP diphosphokinase [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410430403|gb|EKP74773.1| putative GTP diphosphokinase [Leptospira santarosai str. HAI1594]
Length = 674
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|315503193|ref|YP_004082080.1| (p)ppGpp synthetase I SpoT/RelA [Micromonospora sp. L5]
gi|315409812|gb|ADU07929.1| (p)ppGpp synthetase I, SpoT/RelA [Micromonospora sp. L5]
Length = 823
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 216/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 411
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 412 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTPVVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|383753776|ref|YP_005432679.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
gi|381365828|dbj|BAL82656.1| putative GTP diphosphokinase [Selenomonas ruminantium subsp.
lactilytica TAM6421]
Length = 739
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 222/356 (62%), Gaps = 13/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH+GQ+R SG+ Y++H + A +L + + ++A LLHD ++D +
Sbjct: 29 LIRKAYDLAVEAHKGQVRVSGEEYIIHPLHVAEILTELHIDDVTISAALLHDVVEDTLYT 88
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG VA +V+GV+KL ++ ++E V+ + MFLAMA D R +++
Sbjct: 89 KEQIEEMFGEEVAMIVDGVTKLGRIKYKSKEE------VQLENYRKMFLAMAKDIRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++R AKET+EI+ PLANRLGIS K +LE+LC ++L P+++
Sbjct: 143 KLADRLHNMRTLKYMREDKQKRIAKETIEIYAPLANRLGISNIKWELEDLCLRYLEPEKY 202
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L + + E A + +AIE++E + + I + GR K YSI+ KML+ K +
Sbjct: 203 YDLVENVKQKRKERQAFIDTAIEQIETKIGEAGIKAEI-KGRAKHFYSIYKKMLRDKKDI 261
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R++VE+ DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G
Sbjct: 262 SEIYDLSAIRVLVESVRDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRG 321
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL-QMVEWARWVLTWQCE 550
PLE+QIRT MH +EFG AAHW+YKE G + + Q + W R +++ Q E
Sbjct: 322 Y-PLEIQIRTFHMHEVSEFGVAAHWKYKENGKGSTAGGAMDQKMNWLRQMVSLQQE 376
>gi|392394513|ref|YP_006431115.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dehalogenans ATCC 51507]
gi|390525591|gb|AFM01322.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dehalogenans ATCC 51507]
Length = 726
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 219/362 (60%), Gaps = 13/362 (3%)
Query: 193 HKIFRE--DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLH 250
HK+ E V KA+ AE AHRGQ+R SG+ Y+ H +E A +L+ + + +AA LH
Sbjct: 11 HKVSPEGIKLVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILSELEMDEATIAAAFLH 70
Query: 251 DTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM 310
D ++D + + I R FG+ VA LV+GV+KL ++ ++E ++ + L MFLAM
Sbjct: 71 DVVEDTKYTIEDIEREFGSQVAILVDGVTKLGRIEYKSKEE------LQVENLRKMFLAM 124
Query: 311 A-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLC 369
A D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K +LE+L
Sbjct: 125 AKDIRVILIKLADRLHNMRTLKFHSEKKQKEIAQETLEIFAPLANRLGIFRIKWELEDLS 184
Query: 370 FKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHC 427
F++L P ++ +LS L E + I +L + L + I + GR K YSI+
Sbjct: 185 FRYLKPQEYYDLSEGIALKRAEREVQINEVITQLSKRLTEVGIKADI-SGRPKHFYSIYR 243
Query: 428 KMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQS 487
KM+ + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI PK N YQS
Sbjct: 244 KMITQHRELSEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMYQS 303
Query: 488 LHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH-SSFVLQMVEWARWVLT 546
LHT + G P E+QIRT EMH AE+G AAHW+YKEG + Q + W R +L
Sbjct: 304 LHTTLVGAHGEPFEIQIRTWEMHRTAEYGIAAHWKYKEGAGKPVGGNFEQKLSWLRQLLE 363
Query: 547 WQ 548
WQ
Sbjct: 364 WQ 365
>gi|376284865|ref|YP_005158075.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 31A]
gi|371578380|gb|AEX42048.1| GTP pyrophosphokinase [Corynebacterium diphtheriae 31A]
Length = 759
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYATAERLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA L++GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTADFGAEVARLLDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYDEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I +L LK+ +I V+ GR K +SI+ KM+ + DEI
Sbjct: 229 VRLVADRAPSRDRYLNQVIAQLTSTLKENHIDAEVM-GRPKHYWSIYQKMIVRGKDFDEI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L++ +PG+ KDYI+ PKF YQSLHT V G+G P
Sbjct: 288 FDLVGIRVLVDNVNNCYAAIGVVHSLYSAMPGRFKDYISSPKFGVYQSLHTTVMGDGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AEFG AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHYNAEFGIAAHWRYKETKGKNSGEQAEIDQMAWMRQLLDWQKEA 401
>gi|409997388|ref|YP_006751789.1| GTP pyrophosphokinase [Lactobacillus casei W56]
gi|406358400|emb|CCK22670.1| GTP pyrophosphokinase [Lactobacillus casei W56]
Length = 787
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 72 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 131
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 132 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 185
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 186 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 245
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 246 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 302
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 303 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 362
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 363 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVEY 401
>gi|227824350|ref|ZP_03989182.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226904849|gb|EEH90767.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 725
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 218/358 (60%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+FV +A+ A H Q RASG+PY++H + A +LA + + T +AA LHD ++D +
Sbjct: 13 EFVREAYNFAAEQHASQKRASGEPYIIHPLGVASILAQLHMDDTTLAAAFLHDVVEDTDV 72
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA LV+GV+KL ++ ++RE + + MFLAMA D R VL
Sbjct: 73 TLDQLTDIFGLEVAGLVDGVTKLGKIEYISREEQ------QVENYRKMFLAMAKDIRVVL 126
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM T+ +P K++R + ETLEI+ PLA+RLGI K +LE+L F+++ P
Sbjct: 127 IKLADRLHNMRTMKYMPPNKQKRISSETLEIYAPLAHRLGIYAIKWELEDLSFRYMEPQH 186
Query: 378 HTEL--SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL K+ EAMV A+++L D I + GR KS YSI+ KM K +
Sbjct: 187 YYELVEQVKVKRHEREAMVQEAMDELSHLCSDSGIK-CEIQGRPKSFYSIYKKMQKDNKS 245
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++V++ +DCY L +VH W +PG+ KDYI PK NGYQSLHT V
Sbjct: 246 INEIYDLLAVRVLVDSVKDCYGVLGIVHGKWRPIPGRFKDYIAVPKSNGYQSLHTTVVSS 305
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSS---FVLQMVEWARWVLTWQ 548
PLE+QIRT EMH +E+G AAHWRYKE G SS + + W R +L W
Sbjct: 306 SGQPLEIQIRTFEMHRISEYGVAAHWRYKESGGSNMPSSSDKSADEKMAWLRQLLDWH 363
>gi|302866778|ref|YP_003835415.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
gi|302569637|gb|ADL45839.1| RelA/SpoT family protein [Micromonospora aurantiaca ATCC 27029]
Length = 823
Score = 281 bits (720), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 216/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 121 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 180
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 181 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 232
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 233 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 292
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 293 NRLIGEHQPQREALLRQVTQKVSTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 351
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 352 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 411
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 412 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTPVVGPPAH----IDEMTWLRQLLDWQREA 466
>gi|288574632|ref|ZP_06392989.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
gi|288570373|gb|EFC91930.1| (p)ppGpp synthetase I, SpoT/RelA [Dethiosulfovibrio peptidovorans
DSM 11002]
Length = 753
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 170/433 (39%), Positives = 239/433 (55%), Gaps = 39/433 (9%)
Query: 189 AQLKHKIFREDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAA 246
+++ H + +E+ + +A A AH Q R +G+PY++HCV A +LA + + + A
Sbjct: 43 SKVSHYLSKEELMELGEALIFAAEAHGEQKRGTGEPYIIHCVYVASILADMKMDVKTMEA 102
Query: 247 GLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTM 306
LLHD ++D ++ + + FG V LV+GV+KL +L + E+ +A+ L M
Sbjct: 103 ALLHDCIEDTVVTKEALAERFGEEVGVLVDGVTKLGKLPFKSFED------YQAENLRKM 156
Query: 307 FLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQL 365
FL MA D R VLIKLADR HNM TL AL K+QR AKETLEI+ PLA+RLGI K L
Sbjct: 157 FLVMAKDIRVVLIKLADRTHNMRTLGALRKDKQQRIAKETLEIYAPLAHRLGIYQVKRTL 216
Query: 366 ENLCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLY 423
E+L FK+ +P+ + E+ K+ + EA + AI+ LE+ L + I L+ GR K Y
Sbjct: 217 EDLAFKYYDPNMYYEIKKKVQKRLPEREATIKKAIDVLEEKLNSQGIDALI-KGRAKHFY 275
Query: 424 SIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFN 483
SI KM +K L++D+++D+ +R+IV++ CY L +VH +W +PG+ DYI PK N
Sbjct: 276 SILEKMNRKGLSVDQLYDLLAMRIIVDDITTCYTVLGIVHTIWKPIPGQFDDYIANPKNN 335
Query: 484 GYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARW 543
YQSLHT V G PLEVQIRT EMH AE+G AAHWRYKEG + ++ EW
Sbjct: 336 MYQSLHTTVVGPSGEPLEVQIRTWEMHWLAEYGVAAHWRYKEGADKMDDLDAKL-EWI-- 392
Query: 544 VLTWQCEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMS 603
R + G +P DD S VFV + D
Sbjct: 393 ------------RKAIEGGQETRPDEFMERLKDDVLTS---------DVFVFTPQGD--- 428
Query: 604 VQEFPTSSTVMDL 616
V+ P ST +D
Sbjct: 429 VKSLPRGSTPVDF 441
>gi|416384945|ref|ZP_11684705.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
gi|357264961|gb|EHJ13781.1| GTP pyrophosphokinase , (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Crocosphaera watsonii WH 0003]
Length = 744
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 15/370 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDV 96
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I + FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEDIEQRFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KL+DRLHNM TL+ L K++R A ET EIF PLANRLGI K +LE+L FK+L +
Sbjct: 150 VVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESE 209
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ + + E E + + + L + L I L GR K LY I+CKM ++
Sbjct: 210 DYRKIQNFVSEKRIDRETRIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNK 269
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+ E+CY++L VVH L+ +PG+ KDYI PK N YQSLHT V G
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLYQSLHTTVVG 329
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHW+YKE G H+ F + W R +L WQ +
Sbjct: 330 LNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGGSDHTQFSDEDEKFTWLRQLLDWQND- 388
Query: 552 MSKDRSCVGN 561
+ D+ V N
Sbjct: 389 LKDDQEYVDN 398
>gi|94967206|ref|YP_589254.1| (p)ppGpp synthetase SpoT/RelA [Candidatus Koribacter versatilis
Ellin345]
gi|94549256|gb|ABF39180.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Candidatus Koribacter versatilis Ellin345]
Length = 740
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 153/359 (42%), Positives = 229/359 (63%), Gaps = 25/359 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KAF +++ H GQ RASG+PYL+H +E ++LA + ++T +AAGLLHD+++D +
Sbjct: 35 EIVKKAFEFSQKHHAGQTRASGEPYLVHPLEVGIILADMRLDTTAIAAGLLHDSVEDTSV 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVL 317
+ + I FG VA +VEGV+K+S++ +RE +A+ + M LAM D R VL
Sbjct: 95 TIEEIQEQFGEQVAHIVEGVTKISRIDFASREE------AQAENVRKMVLAMVDDIRVVL 148
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL L ++++ A+ETLEI+ P+A+RLG+ + +LE+L F +++P
Sbjct: 149 IKLADRLHNMRTLQHLSQERQEKIARETLEIYAPIAHRLGMGRVRGELEDLAFPYVDP-- 206
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQA-------LKDKNISFLVLCGRHKSLYSIHCKML 430
+ K VE E+ E LEQ LK+ +I V R K LYSI+ K++
Sbjct: 207 ---IGYKRVEEAVESRRKKGEEFLEQVKGVITAKLKENSIDARV-DSRIKRLYSINQKLI 262
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
++++ +++++D+Y LR+I ++ DCY L ++H LW VPG++KD+I P+ N YQSLHT
Sbjct: 263 RQRIDVEQVYDMYALRIITKSVVDCYSILGIIHNLWRPVPGRIKDFIAMPRPNFYQSLHT 322
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-----DCQHSSFVLQMVEWARWV 544
V E P EVQIRT+EMH AE G AAHW+YK+G D Q +++ Q+VEW R V
Sbjct: 323 TVIAENGNPFEVQIRTEEMHKLAEEGIAAHWKYKDGPISAKDEQRLAWLRQVVEWQRDV 381
>gi|258515502|ref|YP_003191724.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
gi|257779207|gb|ACV63101.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum acetoxidans DSM
771]
Length = 727
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 217/352 (61%), Gaps = 11/352 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHR Q R SG+PY+ H + A +LA + + +A LLHD ++D ++
Sbjct: 19 FLRKAYNVAEAAHRNQWRISGEPYIFHPLAVAKILADLELDIEALAGALLHDVVEDTEIT 78
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I + FG+ VA LV+GV+KLS++ ++E + +A+ L MFLAMA D R +LI
Sbjct: 79 LQDIEKDFGSEVALLVDGVTKLSKIDFKSKEEH------QAENLRKMFLAMAKDIRVILI 132
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL A P K++ A ETLEIF PLA+RLGI K ++E+L F+ L P ++
Sbjct: 133 KLADRLHNLRTLGAQPEAKQKEIALETLEIFAPLAHRLGIYHLKWEIEDLAFRFLQPSKY 192
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL+ K+ + + E + IE L++ D I + GR K LYSI+ KM ++K
Sbjct: 193 YELADKVAKTRNKREEDINEIIEVLKKKFIDVGIKADI-QGRPKHLYSIYEKMQRQKKDF 251
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I DI +R+ V+ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 AQILDIMAVRVTVDTVKDCYGTLGIVHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPH 311
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P E+Q+RT EMH AE+G AAHW YKEG F +++ W R +L WQ
Sbjct: 312 GDPFEIQMRTWEMHRTAEYGIAAHWCYKEGGHAQKGFDGKLI-WLRQLLEWQ 362
>gi|254414928|ref|ZP_05028692.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196178417|gb|EDX73417.1| RelA/SpoT family protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 751
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 162/356 (45%), Positives = 216/356 (60%), Gaps = 14/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V++AF A + H Q RASG+PY+ H V A LL +G NST++AAGLLHD ++D ++
Sbjct: 39 LVVRAFEFAYQLHSEQYRASGEPYIAHPVAVAGLLRDLGGNSTMMAAGLLHDVVEDTDVT 98
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
D I FGA V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 99 PDEIESIFGAEVRHLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 151
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K++ A+ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 152 VKLADRLHNMRTLEHLKPQKQRAIAQETREIFAPLANRLGIGRFKWELEDLSFKYLEPNA 211
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + E E +T + L L + I + L R K LY I+ KM ++
Sbjct: 212 YRKIQELVAERRQDREERLTQVSQILRGRLDEMGIRCVDLNSRPKHLYGIYQKMQRRNKE 271
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ +R+IVE E CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 272 FHEIYDLAAMRIIVETNEGCYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGF 331
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---LQMVEWARWVLTWQ 548
P+EVQIRT EMH AE+G AAHW+YKE + + W R +L WQ
Sbjct: 332 HGRPIEVQIRTLEMHRIAEYGIAAHWKYKETGTSDPTQIGADDDKFTWLRQLLEWQ 387
>gi|392426696|ref|YP_006467690.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
gi|391356659|gb|AFM42358.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus
acidiphilus SJ4]
Length = 739
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 219/369 (59%), Gaps = 21/369 (5%)
Query: 197 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 256
R + V KA+ AE+AHR Q+R SG+ Y+LH +E A +LA + + +AA LLHD ++D
Sbjct: 18 RLEIVDKAYRFAEKAHRNQLRNSGEDYILHPLEVAQILADLEMDEATIAAALLHDVVEDT 77
Query: 257 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 315
+ I R FG +A LV+GV+KL +++ ++ + + L MFLAMA D R
Sbjct: 78 EYTIADIEREFGPEIALLVDGVTKLGRIAYKSKVEQ------QVENLRKMFLAMAKDIRV 131
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+LIKLADRLHNM TL + K++ A+ETLEIF PLANRLGI K +LE+L F++L P
Sbjct: 132 ILIKLADRLHNMRTLKYHSVEKQKEIAQETLEIFAPLANRLGIFRIKWELEDLSFRYLKP 191
Query: 376 DQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
++ +L L EA + I ++ + L + I + + GR K YSI+ KM +
Sbjct: 192 QEYYDLVEGIALKRREREAYINEVIVQMRKRLNEVEI-YADIAGRPKHFYSIYRKMTTQH 250
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ EI+D+ +R+IVE DCY AL ++H LW +PG+ KDYI PK N YQSLHT +
Sbjct: 251 KELSEIYDLMAIRVIVETVNDCYGALGIIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLI 310
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-----------QMVEWAR 542
GE P E+QIRT EMH +E+G AAHW+YKE + + Q + W R
Sbjct: 311 GEHGEPFEIQIRTCEMHRTSEYGIAAHWKYKEASSKEPAGGGGGRSAASVNFEQKLSWLR 370
Query: 543 WVLTWQCEA 551
+L WQ E+
Sbjct: 371 QLLEWQHES 379
>gi|350569311|ref|ZP_08937707.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
gi|348660129|gb|EGY76839.1| GTP diphosphokinase [Propionibacterium avidum ATCC 25577]
Length = 773
Score = 281 bits (719), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 214/353 (60%), Gaps = 22/353 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +++
Sbjct: 74 RAYRTAEHYHRGQTRKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYTHEQ 133
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ ++ +A+ + M +AM+ D R ++IKLA
Sbjct: 134 LTADFGEEVALLVDGVTKLDKVQ--------YGESAKAETIRKMVIAMSRDIRVLVIKLA 185
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP + E+
Sbjct: 186 DRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLYDEI 245
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E EA + I + Q L + I V GR K YSI+ KM+ + +I
Sbjct: 246 VHMVAEQAPQREAQLKEVIAIVRQDLDEAGIEATVY-GRPKHYYSIYQKMVVRGRDFSDI 304
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G P
Sbjct: 305 YDLIGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPGGQP 364
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 365 VELQIRTHEMHRRAEYGVAAHWKYKENPNAVGKGIQPDGTDLSWVQSLNQWSK 417
>gi|42523075|ref|NP_968455.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
gi|39575280|emb|CAE79448.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus HD100]
Length = 738
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 153/376 (40%), Positives = 224/376 (59%), Gaps = 21/376 (5%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
+ NA LK + KA+ +E+ H GQ+R SG+PY+ H + A +LA + +
Sbjct: 28 YYPNADLK-------IIEKAYSFSEKMHEGQIRRSGEPYISHPLSVAAILADFHLDLDTI 80
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
A GLLHDT++D + + I R FG +A LV+GV+K+ Q+ + N+ K + + +
Sbjct: 81 ATGLLHDTVEDTAATLEDIRREFGDVIAHLVDGVTKIGQM----KFKNSHEK--QGENIR 134
Query: 305 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
M +AM D R VL+KLADRLHNM TL+ +P K++R A ETLEI+ PLA R+GIS K+
Sbjct: 135 KMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMGISALKI 194
Query: 364 QLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLE----QALKDKNISFLVLCGRH 419
+LE+LCF++ PD + EL ++ + EA IE+++ + L + V GR
Sbjct: 195 ELEDLCFRYYRPDMYYELVQQIKKT--EAEQNRYIEEVKHLIGKELTKAGFRYEVY-GRS 251
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K L+SI+ KM + + D+++D+ R++VE+ +CY AL +VH LW +PG+ KD+I
Sbjct: 252 KHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAECYAALGLVHSLWKPIPGRFKDFIAM 311
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE 539
PK N YQSLHT V G G +E+QIRT EMHL AE G AAHW+YKE LQ
Sbjct: 312 PKANNYQSLHTTVMGPGGERIEIQIRTSEMHLVAEKGIAAHWKYKERGKMMDDGDLQQAN 371
Query: 540 WARWVLTWQCEAMSKD 555
W R +++W + D
Sbjct: 372 WLRDLVSWHQNVRNPD 387
>gi|365873417|ref|ZP_09412950.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
gi|363983504|gb|EHM09711.1| (p)ppGpp synthetase, RelA/SpoT family [Thermanaerovibrio velox DSM
12556]
Length = 760
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 156/352 (44%), Positives = 216/352 (61%), Gaps = 11/352 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A A AHR Q R SG+PY++H + A +LA + + + A LLHD L+D + +
Sbjct: 65 EALVFAANAHRDQRRHSGEPYVVHSISVAAILADMELDVDTLCAALLHDVLEDTEIGKEE 124
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V +V+GV+KL +L+ + E+ +A+ L MFL MA D R VLIKLA
Sbjct: 125 MQSRFGEDVVTMVDGVTKLGKLAFKSMED------YQAENLRKMFLVMAKDIRVVLIKLA 178
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL A K+ AKETLEI+ PLA+RLGI K +LE+LCFK L P+ + E+
Sbjct: 179 DRLHNMRTLQAHRRDKQITIAKETLEIYAPLAHRLGIYNVKRELEDLCFKILEPEIYYEI 238
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + EA++ A++ L+Q LK++ I L GR K YSI+ KM +K L+++++
Sbjct: 239 RRRVRKKLPEREAIIKQALDVLQQKLKEEGIE-ASLSGRPKHFYSIYEKMRRKNLSLEQL 297
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR++V +CYQ L +VH +W +PG+ DYI PK N YQSLHT V G P
Sbjct: 298 YDLLALRVVVGTVAECYQVLGLVHTIWKPIPGQFDDYIANPKSNMYQSLHTTVLGPSGEP 357
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH AE+G AAHW YKEG + + Q + W R VL Q E
Sbjct: 358 LEVQIRTWEMHWLAEYGIAAHWHYKEGK-RRVDQIDQKLSWIRQVLESQQEG 408
>gi|427392523|ref|ZP_18886528.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
gi|425731484|gb|EKU94302.1| RelA/SpoT family protein [Alloiococcus otitis ATCC 51267]
Length = 736
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 180/472 (38%), Positives = 254/472 (53%), Gaps = 55/472 (11%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ AE AHRGQMR S + Y+ H V+ A +LA I + VA G LHD ++D S
Sbjct: 27 FVKRAYDVAEEAHRGQMRKSQEEYITHPVQVAAILAEIKMDPVTVATGFLHDVIEDTLYS 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
YD I F VADLV+GVSKL + ++E + +A+ M LAMA D R VL+
Sbjct: 87 YDDIAEMFNPKVADLVDGVSKLGKFKFKSKEEH------QAENHRKMLLAMAKDVRVVLV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL K++ A+ETLEI+ PLA+RLGIS K +LE+ +++NP Q+
Sbjct: 141 KLADRLHNMRTLKYHRPEKQREIARETLEIYAPLADRLGISRIKWELEDTALRYINPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + E + +A E +++++ D +I + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMKSRREDRERYIENAQELIQESVDDLDIEANI-TGRPKHIYSIYRKMKNQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV + +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 GEIYDLLAIRVIVPSIKDCYAVLGAIHTRWKPMPGRFKDYIAMPKANMYQSLHTTVLGPD 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEAMSK 554
PLEVQIRT++MH AE+G AAHW YKEG Q + + W R ++ Q E+
Sbjct: 320 ATPLEVQIRTQQMHEVAEYGVAAHWAYKEGKTQKVKEDSDNKQLSWFRDIIELQTES--- 376
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
++A D S K D V+V + D V E P +S+ +
Sbjct: 377 ------------------NNASDFMDSIKEDIFQD-KVYVFSPKGD---VMELPKNSSTL 414
Query: 615 DLL----ERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 662
D G S+ G + ++ P LN+ KLK GD+VE+
Sbjct: 415 DFAYHVHTEVGNKST-----GAKVNGKIVP-LNY--------KLKNGDIVEM 452
>gi|67921546|ref|ZP_00515064.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
gi|67856658|gb|EAM51899.1| RelA/SpoT protein [Crocosphaera watsonii WH 8501]
Length = 744
Score = 281 bits (719), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 225/370 (60%), Gaps = 15/370 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H GQ R SG+PY+ H V A +L +G + ++AAG LHD ++D +
Sbjct: 37 DLICRAFNFAYQLHEGQTRKSGEPYIAHPVAVAGILRELGGDKAMIAAGFLHDVVEDTDV 96
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + I + FG VA LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 97 TVEDIEQRFGQEVALLVEGVTKLSKF-------NFSNKTEQQAENFRRMFLAMAKDIRVI 149
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KL+DRLHNM TL+ L K++R A ET EIF PLANRLGI K +LE+L FK+L +
Sbjct: 150 VVKLSDRLHNMRTLEPLRPDKQRRIALETKEIFAPLANRLGIWRVKWELEDLSFKYLESE 209
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ ++ + + E E + + + L + L I L GR K LY I+CKM ++
Sbjct: 210 DYRKIQNFVSEKRIDRETRIETVKKLLSKRLDTMGIQVEELQGRPKHLYGIYCKMQRQNK 269
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IV+ E+CY++L VVH L+ +PG+ KDYI PK N YQSLHT V G
Sbjct: 270 GFHEIYDLAALRIIVKTNEECYRSLAVVHDLFKPMPGRFKDYIGLPKPNLYQSLHTTVVG 329
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV--LQMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHW+YKE G H+ F + W R +L WQ +
Sbjct: 330 LNGRPLEIQIRTLEMHHIAEYGIAAHWKYKETGGSDHTQFSDEDEKFTWLRQLLDWQND- 388
Query: 552 MSKDRSCVGN 561
+ D+ V N
Sbjct: 389 LKDDQEYVDN 398
>gi|304436591|ref|ZP_07396560.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370287|gb|EFM23943.1| GTP diphosphokinase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 739
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 218/360 (60%), Gaps = 23/360 (6%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+I+A+ A AHRGQ R SG+PY++H + A +L + + + A LHD ++D +
Sbjct: 29 IIRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTL 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I FG V L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 89 EEIEAVFGKNVMTLIDGVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ +
Sbjct: 143 LADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYY 202
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L ++ + E + A++K+ L+ I + GR K YSI+ KM + +++
Sbjct: 203 TLVEEVKQKRRERQEFIQDAVQKIRAQLETAGIEAEI-KGRAKHFYSIYRKMKRDNKSIN 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V EG
Sbjct: 262 EIYDLSAVRVLVSTVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTEG- 320
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRTK MH +EFG AAHW+YKE GD Q + W R +++ Q E
Sbjct: 321 DPLEIQIRTKAMHQISEFGIAAHWKYKEAGRSVGAGDEND-----QKMSWLRQMVSLQKE 375
>gi|456989321|gb|EMG24130.1| putative GTP diphosphokinase, partial [Leptospira interrogans
serovar Copenhageni str. LT2050]
Length = 493
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ A+
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQDSALD 376
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
P F ++ + H+ VFV K + + P +T+
Sbjct: 377 --------------PKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|313150268|dbj|BAJ39892.1| ppGpp synthetase [Actinoplanes teichomyceticus]
Length = 821
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 217/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 119 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 178
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 179 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 230
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 231 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 290
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ +++ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 291 NRLIGEHQPQREALLRQVTNRVQLDLKSAKIKAEV-TGRPKHLYSIYQKMIVRGRDFNDI 349
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 350 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 409
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 410 VEMQIRTFAMHRTAEFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 464
>gi|317484827|ref|ZP_07943721.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345890061|ref|ZP_08841020.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
gi|316923921|gb|EFV45113.1| RelA/SpoT family protein [Bilophila wadsworthia 3_1_6]
gi|345038932|gb|EGW43306.1| hypothetical protein HMPREF0178_03794 [Bilophila sp. 4_1_30]
Length = 738
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/340 (44%), Positives = 215/340 (63%), Gaps = 10/340 (2%)
Query: 214 GQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVAD 273
GQ+R SG+PYL H + A +LA +G ++ VAAGLLHDT++D ++ + + FG VAD
Sbjct: 47 GQVRLSGEPYLSHPLAVAEVLAELGFDAHSVAAGLLHDTVEDTKVTLEEVDAEFGEQVAD 106
Query: 274 LVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDA 332
+V+GV+K+S ++ ++E +A+ + M LAM+ D R ++KLADR+HNM TLD
Sbjct: 107 IVDGVTKISMMTFDSKEEQ------QAENIRKMILAMSHDIRVPIVKLADRVHNMRTLDF 160
Query: 333 LPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV--ECFD 390
KRQR A+ET++I+VPLANRLG+ K++LE L FK+++PD + ++S L + +
Sbjct: 161 QKAHKRQRIAQETMDIYVPLANRLGLHRLKLELEGLSFKYIHPDVYAQISDWLESNQVVE 220
Query: 391 EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVE 450
++ I KLE L I V GR K +YSI+ KM ++ LT+D++HDI R+IV+
Sbjct: 221 RQLIAKIIAKLEGILSSNQIEGTV-WGRIKHIYSIYKKMTEQNLTLDDMHDILAFRVIVK 279
Query: 451 NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMH 510
+ DCY L +VH W VPG+ KDYI+ PK NGYQSLHT V G +E+QIRT+EMH
Sbjct: 280 DVRDCYAVLGLVHAQWKPVPGRFKDYISMPKANGYQSLHTTVIGPEGERIEIQIRTEEMH 339
Query: 511 LQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
AE G A+HW YKE S EW R ++ Q +
Sbjct: 340 RLAEHGVASHWLYKERHHAVSVKDAPEFEWLREIVNRQGQ 379
>gi|429735228|ref|ZP_19269197.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
gi|429159340|gb|EKY01855.1| GTP diphosphokinase [Selenomonas sp. oral taxon 138 str. F0429]
Length = 743
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 221/360 (61%), Gaps = 19/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIRKAYAYAEQAHSGQVRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCA 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TLEEMEAEFGKNIMALIDGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + KRQR AKETLE++ PLANRLGIS KV+LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRQRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEA 201
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L ++ E + +IE++ + L+ I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRKERQEFIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTH 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
G PLE+QIRTK MH +EFG AAHW+YKE G + Q + W R +++ Q E
Sbjct: 321 GY-PLEIQIRTKAMHQVSEFGVAAHWKYKEAGRSIGATDEND---QKMSWLRQMVSLQKE 376
>gi|417989775|ref|ZP_12630276.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|417993039|ref|ZP_12633390.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|417996397|ref|ZP_12636677.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|418015214|ref|ZP_12654791.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
gi|410532448|gb|EKQ07156.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
CRF28]
gi|410535519|gb|EKQ10140.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
M36]
gi|410537520|gb|EKQ12094.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
A2-362]
gi|410552038|gb|EKQ26077.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lpc-37]
Length = 742
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 212/332 (63%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALTDLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEG 349
>gi|366085882|ref|ZP_09452367.1| GTP pyrophosphokinase [Lactobacillus zeae KCTC 3804]
Length = 741
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 214/339 (63%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A + M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELA------ENHRKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 356
>gi|153004178|ref|YP_001378503.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
gi|152027751|gb|ABS25519.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. Fw109-5]
Length = 738
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 155/359 (43%), Positives = 216/359 (60%), Gaps = 21/359 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A LLA + + V GLLHDT++D
Sbjct: 35 DLIKKAYVYSAKVHQGQIRKSGEPYLIHPLEVAGLLAELKLDEASVVTGLLHDTIEDTLA 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I FG +A+LV+GV+KLSQ S NT + +A+ M +AMA D R +L
Sbjct: 95 TKEEIAELFGPEIAELVDGVTKLSQFSA----ANTQEEK-QAENFRKMVVAMAKDIRVLL 149
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + ++R A+ETL+I+ PLANRLGI K +LE+L FK+L P
Sbjct: 150 VKLADRTHNMRTLDHMKPESQERIARETLDIYAPLANRLGIQWLKSELEDLSFKYLRPQD 209
Query: 378 HTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ELS+++ E V ++ + L I+ V GR K +YSI KM + +
Sbjct: 210 YVELSTRVEAEQKEKGEFVEEVVDLIRTRLTGAGINAQV-SGRVKHVYSIWRKMRQLDVD 268
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ G R+IV++ +CY++L ++H LW VPG+ KDYI PK N YQSLHT V G
Sbjct: 269 FDQIQDVIGFRVIVDSVAECYESLGIIHSLWKPVPGRFKDYIAIPKPNLYQSLHTTVVGP 328
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE------------GDCQHSSFVLQMVEWAR 542
+EVQIRTKEMH AE G AAHW YKE D + ++ Q+VEW R
Sbjct: 329 RGERIEVQIRTKEMHRIAEEGVAAHWAYKEKGRDGKGAELSKKDAESFGWLRQLVEWQR 387
>gi|427731593|ref|YP_007077830.1| RelA/SpoT family (p)ppGpp synthetase [Nostoc sp. PCC 7524]
gi|427367512|gb|AFY50233.1| (p)ppGpp synthetase, RelA/SpoT family [Nostoc sp. PCC 7524]
Length = 797
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 216/357 (60%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H+GQ R SG+ Y+ H V A LL +G + ++AAG LHD ++D ++
Sbjct: 89 LICRAFEFAYQLHKGQYRKSGELYISHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 148
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I + FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 149 IEEIEQHFGPEVRQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 201
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 202 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKYLEPEA 261
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++ + E E + A L++ L+ I L + GR K LYSI+ KM +++
Sbjct: 262 FRQIQQHVSEKRTAREEKLVKATTILQERLQQAGIRCLDISGRPKHLYSIYQKMQRQQKE 321
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ LR+IV+ E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 322 FHEIYDLAALRIIVQGNEECYRALAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 381
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE HS + W R +L WQ +
Sbjct: 382 TGRPLEVQIRTMEMHRIAEYGIAAHWKYKETGGSHSQLTTSDEKFTWLRQLLEWQSD 438
>gi|262202238|ref|YP_003273446.1| RelA/SpoT family protein [Gordonia bronchialis DSM 43247]
gi|262085585|gb|ACY21553.1| RelA/SpoT family protein [Gordonia bronchialis DSM 43247]
Length = 790
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/358 (43%), Positives = 216/358 (60%), Gaps = 20/358 (5%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ AE HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D +
Sbjct: 86 AYDVAEERHRGQNRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLDQL 145
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
+ FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+AD
Sbjct: 146 EKDFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVAD 197
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 198 RLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIV 257
Query: 383 SKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + + + + AL IS V GR K +SI+ KM+ K D+IH
Sbjct: 258 RLVADRAPSRDTYLARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGRDFDDIH 316
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ G+R++ + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PL
Sbjct: 317 DLVGMRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPL 376
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
EVQIRT EMH AEFG AAHWRYKE G S+ + +M W R +L WQ EA
Sbjct: 377 EVQIRTHEMHRTAEFGIAAHWRYKESGYKDRKGRRTDSTEIDEMA-WMRQLLDWQREA 433
>gi|406998160|gb|EKE16104.1| hypothetical protein ACD_11C00030G0012 [uncultured bacterium]
Length = 492
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/377 (42%), Positives = 227/377 (60%), Gaps = 20/377 (5%)
Query: 197 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 256
R+ +++A+ AE AHRGQ R+SG+ Y+ H + TA LA +G +AAGLLHD +D
Sbjct: 21 RKKMIVEAYEFAEEAHRGQKRSSGEDYIQHSLATAKTLAEMGMGRNTIAAGLLHDVYEDT 80
Query: 257 FLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARA 315
+S I + FG VA +V+GVSKL ++ KL + + + L MFLAMA D R
Sbjct: 81 SVSLKDIEKKFGKEVAFMVDGVSKLGKI-KL----RGSHEEYYLENLRKMFLAMAADIRV 135
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
V+IKLADRLHNM TL P K+ R AKET+EIF P+ANRLGI + QL++L F++L P
Sbjct: 136 VIIKLADRLHNMQTLKHRPPEKQLRIAKETMEIFAPIANRLGIGEIRSQLQDLSFEYLEP 195
Query: 376 DQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + + + + E V AI +LE+ LK + I + + GR KSLYS K+ K
Sbjct: 196 ENYKFTKETITKNYQERERYVNQAIHELEKELKKEGIDVVDIHGRAKSLYSSFLKLKKYD 255
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ ++++HD+ +R+IV DCY+AL +VH+ + + G++KDYI+ PK NGYQS+HT +
Sbjct: 256 MDINKVHDLTAVRIIVSEIADCYEALGIVHKKYRPMIGRIKDYISLPKPNGYQSIHTTIF 315
Query: 494 G-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS----------SFVLQMVEWAR 542
G EG + LEVQIRT +MH +AEFG AAHW Y E + S L+ ++W
Sbjct: 316 GPEGRI-LEVQIRTLKMHNEAEFGIAAHWIYSEKAKKASWKDYIFRIKKGVALKDLQWVN 374
Query: 543 WVLTWQCEAMSKDRSCV 559
+ WQ E D V
Sbjct: 375 QLRDWQGEIGRDDEEFV 391
>gi|257416410|ref|ZP_05593404.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|422695354|ref|ZP_16753342.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
gi|257158238|gb|EEU88198.1| RelA/SpoT protein [Enterococcus faecalis ARO1/DG]
gi|315147637|gb|EFT91653.1| GTP diphosphokinase [Enterococcus faecalis TX4244]
Length = 737
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|256375833|ref|YP_003099493.1| (p)ppGpp synthetase I SpoT/RelA [Actinosynnema mirum DSM 43827]
gi|255920136|gb|ACU35647.1| (p)ppGpp synthetase I, SpoT/RelA [Actinosynnema mirum DSM 43827]
Length = 766
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 217/355 (61%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE HR Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D
Sbjct: 66 RAYDVAEEKHRPQRRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTDYSLDQ 125
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ A EA+ + M +AMA D R ++IKLA
Sbjct: 126 LRDDFGTVVALLVDGVTKLDKVKLGA--------AAEAETIRKMVIAMAKDPRVLVIKLA 177
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 178 DRLHNMRTMRFLPPEKQARKARETLEVLAPLAHRLGMATVKWELEDLAFAILQPKKYDEI 237
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + ++ I +L L+ ++ V GR K YSI+ KM+ + D+
Sbjct: 238 V-RLVANRAPSRDTYLSGVINELSGHLEGARLTAKV-EGRPKHYYSINQKMIVRGRDFDD 295
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R+ V+ DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G
Sbjct: 296 IHDLVGVRIQVDEVRDCYAAMGVVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGK 355
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHWRYKE H +++ E W R +L WQ EA
Sbjct: 356 PLEVQIRTYDMHRTAEYGIAAHWRYKETKGSHRGKSVEVDEMAWMRQLLDWQREA 410
>gi|257422238|ref|ZP_05599228.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|422705431|ref|ZP_16763233.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
gi|257164062|gb|EEU94022.1| GTP pyrophosphokinase [Enterococcus faecalis X98]
gi|315157277|gb|EFU01294.1| GTP diphosphokinase [Enterococcus faecalis TX0043]
Length = 737
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|145594359|ref|YP_001158656.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
gi|145303696|gb|ABP54278.1| RelA/SpoT family protein [Salinispora tropica CNB-440]
Length = 815
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/359 (44%), Positives = 216/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + D
Sbjct: 113 RAFDTAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYTLDQ 172
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 173 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 224
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 225 DRLHNMRTLIFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 284
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ K+ LK I V GR K LYSI+ KM+ + ++I
Sbjct: 285 NRLIGEHQPQREALLRQVTRKVGTDLKSAKIRAEV-TGRPKHLYSIYQKMIVRGRDFNDI 343
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 344 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 403
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 404 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 458
>gi|269795064|ref|YP_003314519.1| (p)ppGpp synthetase, RelA/SpoT family [Sanguibacter keddieii DSM
10542]
gi|269097249|gb|ACZ21685.1| (p)ppGpp synthetase, RelA/SpoT family [Sanguibacter keddieii DSM
10542]
Length = 775
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 212/354 (59%), Gaps = 12/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE+AHRGQMR SGDPY+ H V + +LA +G +AA LLHDT++D S
Sbjct: 66 IIERAYVTAEKAHRGQMRKSGDPYITHPVAVSTILAELGMTPPTLAAALLHDTVEDTDYS 125
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + R +G +A LV+GV+KL ++ T +A+ + M +AMA D R ++I
Sbjct: 126 LDQLRRDYGDEIAMLVDGVTKLDKV--------TYGDAAQAETVRKMVVAMARDIRVLVI 177
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN T +P QR A+ET+EI+ PLA+RLG++T K +LE+L F+ L P +
Sbjct: 178 KLADRLHNARTWKFVPSSSAQRKARETIEIYAPLAHRLGMNTIKWELEDLSFQTLYPKVY 237
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E E + E++ L+ I V GR K YSI+ KM+ +
Sbjct: 238 DEIVHLVSERAPAREEYLALVREQITADLRTSKIKATV-TGRPKHYYSIYQKMIVRGHDF 296
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ G R++V++ DCY L +H W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 297 ADIYDLVGTRVLVDSVRDCYATLGALHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 356
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P+E+QIRT EMH +AE+G AAHW+YKE + ++W R ++ WQ E
Sbjct: 357 GKPVEIQIRTHEMHRRAEYGVAAHWKYKEAAKDGADAAGNDMQWLRQLVDWQRE 410
>gi|118580813|ref|YP_902063.1| (p)ppGpp synthetase I SpoT/RelA [Pelobacter propionicus DSM 2379]
gi|118503523|gb|ABL00006.1| (p)ppGpp synthetase I, SpoT/RelA [Pelobacter propionicus DSM 2379]
Length = 717
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 166/421 (39%), Positives = 239/421 (56%), Gaps = 36/421 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ + H+GQ R SG+PY++H +E A LLA + + V G LHDT++D
Sbjct: 21 NLIRKAYVYCAKVHQGQTRLSGEPYIIHPMEVAGLLAELRLDVASVITGFLHDTIEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG VA LV+GV+K+S++ + + +A+ M LAM+ D R +L
Sbjct: 81 TAEELTSLFGDEVATLVDGVTKISKIHFKTKAES------QAENFRKMLLAMSIDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ P K++ A+ET++I+ P+ANRLGIS KV+LE+L F++LNP+
Sbjct: 135 VKLADRLHNMRTLEFQPELKQRSIAQETMDIYAPIANRLGISWIKVELEDLSFRYLNPEI 194
Query: 378 HTELSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+ K L + EA V+ A + L I V GR K LYSI+ KML + +
Sbjct: 195 YFDLARKISLKKREREAYVSEAKTVIADKLGQHGIKGEV-SGRSKHLYSIYRKMLARNVE 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ LR++V++ DCY+ L V+H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 LDEIYDLIALRILVDDVRDCYEVLGVIHSAWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
+EVQIRT EMH A+ G AAHW+YKEG V + W R +L WQ E +
Sbjct: 314 HGDRMEVQIRTHEMHNVADAGIAAHWKYKEGKGYDERDV-KRFSWLRQLLEWQQE-LQDS 371
Query: 556 RSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMD 615
R + DS+K FP + + PQ V+ FP ST +D
Sbjct: 372 REFM---DSVKVEL-FPEEV----YVFTPQG----------------DVKPFPRGSTPID 407
Query: 616 L 616
Sbjct: 408 F 408
>gi|27262490|gb|AAN87526.1| GTP pyrophosphokinase [Heliobacillus mobilis]
Length = 734
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 217/355 (61%), Gaps = 10/355 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+FV + F A+ AH GQ+R SG+PY+ H + A +LA + + +AAGLLHD ++D +
Sbjct: 23 EFVRRDFQYADVAHTGQLRKSGEPYIYHPLAVAFILADLELDMATIAAGLLHDVVEDTPI 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + + FG VA LV+GV+KLS+L +++ + + L MFLAMA D R +L
Sbjct: 83 TLEELEKEFGPEVALLVDGVTKLSRLEVRSKQEQ------QVESLRKMFLAMAKDIRVIL 136
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL K++ A+ET+E+F PLANRLGIS K +LE+L ++L P+
Sbjct: 137 IKLADRLHNMRTLRHQKPEKQREIAEETIELFAPLANRLGISRIKWELEDLSLRYLEPET 196
Query: 378 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L ++ E + I +L + L+ + + GR K YSI+ KM +K
Sbjct: 197 YYDLVQRIATKRAEREERINDIIRELSEKLEAVGVKADI-SGRPKHFYSIYRKMTNQKKD 255
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ EI+D+ +R++V++ +DCY AL ++H +W +P + KDYI PK N YQSLHT + G
Sbjct: 256 LSEIYDLIAVRVLVDSVKDCYGALGIIHTIWKPIPMRFKDYIATPKTNMYQSLHTTLVGP 315
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P EVQIRT EMH AE+G AAHW+YKEG + + + W R + WQ E
Sbjct: 316 MGEPFEVQIRTFEMHRTAEYGIAAHWKYKEGGKSQGTGFEEKLAWLRQLQEWQSE 370
>gi|153816124|ref|ZP_01968792.1| hypothetical protein RUMTOR_02372 [Ruminococcus torques ATCC 27756]
gi|145846609|gb|EDK23527.1| RelA/SpoT family protein [Ruminococcus torques ATCC 27756]
Length = 438
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 248/419 (59%), Gaps = 26/419 (6%)
Query: 157 SSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFRE----------DFVIKAFY 206
+ A +EL N+E IV+G+ +++ QL H + + KA+
Sbjct: 9 AGTAEYEELNKNLE--IVDGHAVKAPEDYQDPEQLYHVLIERVRKYHPSADITMIEKAYR 66
Query: 207 EAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRT 266
+ AHR Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D +
Sbjct: 67 IGKEAHRDQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLDDVAGE 126
Query: 267 FGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKLADRL 324
FG VA LV+GV+KL QL N + K V+A+ L MFLAMA D R ++IKLADRL
Sbjct: 127 FGEEVALLVDGVTKLGQL------NYSQDKLEVQAENLRKMFLAMAKDIRVIIIKLADRL 180
Query: 325 HNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSK 384
HNM TL+ + K+Q A+ET++I+ P+A RLGIS K +L++L K+ P+ + L
Sbjct: 181 HNMRTLEFMTPTKQQEKARETMDIYAPIAQRLGISKIKTELDDLSLKYWKPEVYYNLVRD 240
Query: 385 L--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 442
L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+++D+
Sbjct: 241 LNRRKTEREEFVQQIVAEVSKHMKNAHIEAKV-YGRVKHFFSIYKKMVNQNKTLDQVYDL 299
Query: 443 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 502
+ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P E+
Sbjct: 300 FAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMGPSGQPFEI 359
Query: 503 QIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ--MVEWARWVLTWQCEAMSKDRSCV 559
QIRT+EMH AE+G AAHW+YKEG S Q + W R +L WQ + MS +R +
Sbjct: 360 QIRTEEMHKTAEYGIAAHWKYKEGGDSAKSMESQEAKLNWLRQILEWQRD-MSDNREFL 417
>gi|116495022|ref|YP_806756.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
gi|116105172|gb|ABJ70314.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei ATCC 334]
Length = 742
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 212/332 (63%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEG 349
>gi|257090255|ref|ZP_05584616.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|312902753|ref|ZP_07761957.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|422690313|ref|ZP_16748370.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
gi|422702134|ref|ZP_16759974.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|256999067|gb|EEU85587.1| RelA/SpoT family protein [Enterococcus faecalis CH188]
gi|310633807|gb|EFQ17090.1| GTP diphosphokinase [Enterococcus faecalis TX0635]
gi|315169383|gb|EFU13400.1| GTP diphosphokinase [Enterococcus faecalis TX1342]
gi|315576684|gb|EFU88875.1| GTP diphosphokinase [Enterococcus faecalis TX0630]
Length = 737
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|29376496|ref|NP_815650.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227519316|ref|ZP_03949365.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229545443|ref|ZP_04434168.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|229549687|ref|ZP_04438412.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|255972385|ref|ZP_05422971.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255975488|ref|ZP_05426074.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256762903|ref|ZP_05503483.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256853488|ref|ZP_05558858.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256959287|ref|ZP_05563458.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256964754|ref|ZP_05568925.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|257079353|ref|ZP_05573714.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|257082207|ref|ZP_05576568.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|257084825|ref|ZP_05579186.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|257087178|ref|ZP_05581539.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257419654|ref|ZP_05596648.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294779745|ref|ZP_06745132.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|300860169|ref|ZP_07106256.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|307268139|ref|ZP_07549526.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|307272834|ref|ZP_07554081.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|307275913|ref|ZP_07557046.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|307277696|ref|ZP_07558782.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|307287881|ref|ZP_07567914.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|307295910|ref|ZP_07575742.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|312900879|ref|ZP_07760173.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|312951286|ref|ZP_07770187.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|384513600|ref|YP_005708693.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|384518976|ref|YP_005706281.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|397700204|ref|YP_006537992.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|422686386|ref|ZP_16744584.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|422692692|ref|ZP_16750707.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|422697189|ref|ZP_16755135.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|422704878|ref|ZP_16762688.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|422711426|ref|ZP_16768355.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|422713284|ref|ZP_16770037.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|422717180|ref|ZP_16773870.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|422719465|ref|ZP_16776106.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|422724016|ref|ZP_16780506.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|422725202|ref|ZP_16781670.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|422730242|ref|ZP_16786635.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|422732553|ref|ZP_16788884.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|422735767|ref|ZP_16792033.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|422741846|ref|ZP_16795868.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|424672845|ref|ZP_18109788.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|424678338|ref|ZP_18115178.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|424682195|ref|ZP_18118972.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|424685423|ref|ZP_18122121.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|424688183|ref|ZP_18124799.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|424691052|ref|ZP_18127579.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|424694635|ref|ZP_18131031.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|424695820|ref|ZP_18132193.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|424702067|ref|ZP_18138230.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|424704288|ref|ZP_18140390.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|424712754|ref|ZP_18144923.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|424716877|ref|ZP_18146176.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|424722259|ref|ZP_18151323.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|424722967|ref|ZP_18151987.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|424728350|ref|ZP_18156957.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|424740517|ref|ZP_18168899.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|424749874|ref|ZP_18177951.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|424759337|ref|ZP_18187003.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|428767377|ref|YP_007153488.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|430360791|ref|ZP_19426449.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|430367252|ref|ZP_19427815.1| RelA/SpoT family protein [Enterococcus faecalis M7]
gi|29343960|gb|AAO81720.1| GTP pyrophosphokinase [Enterococcus faecalis V583]
gi|227073245|gb|EEI11208.1| GTP pyrophosphokinase [Enterococcus faecalis TX0104]
gi|229305167|gb|EEN71163.1| GTP pyrophosphokinase [Enterococcus faecalis ATCC 29200]
gi|229309359|gb|EEN75346.1| GTP pyrophosphokinase [Enterococcus faecalis TX1322]
gi|255963403|gb|EET95879.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255968360|gb|EET98982.1| RelA/SpoT protein [Enterococcus faecalis T2]
gi|256684154|gb|EEU23849.1| RelA/SpoT protein [Enterococcus faecalis T3]
gi|256711947|gb|EEU26985.1| GTP pyrophosphokinase [Enterococcus faecalis T8]
gi|256949783|gb|EEU66415.1| RelA/SpoT protein [Enterococcus faecalis DS5]
gi|256955250|gb|EEU71882.1| RelA/SpoT protein [Enterococcus faecalis HIP11704]
gi|256987383|gb|EEU74685.1| RelA/SpoT protein [Enterococcus faecalis JH1]
gi|256990237|gb|EEU77539.1| RelA/SpoT protein [Enterococcus faecalis E1Sol]
gi|256992855|gb|EEU80157.1| RelA/SpoT protein [Enterococcus faecalis Fly1]
gi|256995208|gb|EEU82510.1| RelA/SpoT protein [Enterococcus faecalis D6]
gi|257161482|gb|EEU91442.1| RelA/SpoT family protein [Enterococcus faecalis T11]
gi|294453119|gb|EFG21534.1| GTP diphosphokinase [Enterococcus faecalis PC1.1]
gi|295113238|emb|CBL31875.1| (p)ppGpp synthetase, RelA/SpoT family [Enterococcus sp. 7L76]
gi|300849208|gb|EFK76958.1| GTP diphosphokinase [Enterococcus faecalis TUSoD Ef11]
gi|306496241|gb|EFM65820.1| GTP diphosphokinase [Enterococcus faecalis TX0411]
gi|306501026|gb|EFM70333.1| GTP diphosphokinase [Enterococcus faecalis TX0109]
gi|306505575|gb|EFM74759.1| GTP diphosphokinase [Enterococcus faecalis TX0860]
gi|306507243|gb|EFM76380.1| GTP diphosphokinase [Enterococcus faecalis TX2134]
gi|306510448|gb|EFM79471.1| GTP diphosphokinase [Enterococcus faecalis TX0855]
gi|306515529|gb|EFM84057.1| GTP diphosphokinase [Enterococcus faecalis TX4248]
gi|310630722|gb|EFQ14005.1| GTP diphosphokinase [Enterococcus faecalis TX0102]
gi|311291978|gb|EFQ70534.1| GTP diphosphokinase [Enterococcus faecalis TX0470]
gi|315025979|gb|EFT37911.1| GTP diphosphokinase [Enterococcus faecalis TX2137]
gi|315028900|gb|EFT40832.1| GTP diphosphokinase [Enterococcus faecalis TX4000]
gi|315033291|gb|EFT45223.1| GTP diphosphokinase [Enterococcus faecalis TX0017]
gi|315034529|gb|EFT46461.1| GTP diphosphokinase [Enterococcus faecalis TX0027]
gi|315143404|gb|EFT87420.1| GTP diphosphokinase [Enterococcus faecalis TX2141]
gi|315149223|gb|EFT93239.1| GTP diphosphokinase [Enterococcus faecalis TX0012]
gi|315152592|gb|EFT96608.1| GTP diphosphokinase [Enterococcus faecalis TX0031]
gi|315159888|gb|EFU03905.1| GTP diphosphokinase [Enterococcus faecalis TX0312]
gi|315161370|gb|EFU05387.1| GTP diphosphokinase [Enterococcus faecalis TX0645]
gi|315163667|gb|EFU07684.1| GTP diphosphokinase [Enterococcus faecalis TX1302]
gi|315167501|gb|EFU11518.1| GTP diphosphokinase [Enterococcus faecalis TX1341]
gi|315174315|gb|EFU18332.1| GTP diphosphokinase [Enterococcus faecalis TX1346]
gi|315574555|gb|EFU86746.1| GTP diphosphokinase [Enterococcus faecalis TX0309B]
gi|315581803|gb|EFU93994.1| GTP diphosphokinase [Enterococcus faecalis TX0309A]
gi|323481109|gb|ADX80548.1| GTP pyrophosphokinase [Enterococcus faecalis 62]
gi|327535489|gb|AEA94323.1| GTP diphosphokinase [Enterococcus faecalis OG1RF]
gi|397336843|gb|AFO44515.1| GTP pyrophosphokinase [Enterococcus faecalis D32]
gi|402349566|gb|EJU84510.1| GTP diphosphokinase [Enterococcus faecalis ERV116]
gi|402351666|gb|EJU86546.1| GTP diphosphokinase [Enterococcus faecalis ERV103]
gi|402353351|gb|EJU88183.1| GTP diphosphokinase [Enterococcus faecalis 599]
gi|402358773|gb|EJU93433.1| GTP diphosphokinase [Enterococcus faecalis ERV129]
gi|402361575|gb|EJU96125.1| GTP diphosphokinase [Enterococcus faecalis ERV25]
gi|402362896|gb|EJU97408.1| GTP diphosphokinase [Enterococcus faecalis ERV31]
gi|402370073|gb|EJV04313.1| GTP diphosphokinase [Enterococcus faecalis ERV62]
gi|402370270|gb|EJV04490.1| GTP diphosphokinase [Enterococcus faecalis ERV37]
gi|402379160|gb|EJV12977.1| GTP diphosphokinase [Enterococcus faecalis ERV41]
gi|402379631|gb|EJV13423.1| GTP diphosphokinase [Enterococcus faecalis ERV65]
gi|402382377|gb|EJV16044.1| GTP diphosphokinase [Enterococcus faecalis ERV63]
gi|402386637|gb|EJV20139.1| GTP diphosphokinase [Enterococcus faecalis ERV68]
gi|402389444|gb|EJV22840.1| GTP diphosphokinase [Enterococcus faecalis ERV72]
gi|402394029|gb|EJV27227.1| GTP diphosphokinase [Enterococcus faecalis ERV81]
gi|402400374|gb|EJV33205.1| GTP diphosphokinase [Enterococcus faecalis ERV73]
gi|402401938|gb|EJV34677.1| GTP diphosphokinase [Enterococcus faecalis ERV85]
gi|402404795|gb|EJV37408.1| GTP diphosphokinase [Enterococcus faecalis R508]
gi|402407443|gb|EJV39973.1| GTP diphosphokinase [Enterococcus faecalis ERV93]
gi|427185550|emb|CCO72774.1| GTP pyrophosphokinase [Enterococcus faecalis str. Symbioflor 1]
gi|429512728|gb|ELA02326.1| RelA/SpoT family protein [Enterococcus faecalis OG1X]
gi|429516725|gb|ELA06204.1| RelA/SpoT family protein [Enterococcus faecalis M7]
Length = 737
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|359685240|ref|ZP_09255241.1| GTP pyrophosphokinase [Leptospira santarosai str. 2000030832]
Length = 674
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V+KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VLKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|191638527|ref|YP_001987693.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|385820236|ref|YP_005856623.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|385823433|ref|YP_005859775.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|418005247|ref|ZP_12645243.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
gi|190712829|emb|CAQ66835.1| GTP pyrophosphokinase [Lactobacillus casei BL23]
gi|327382563|gb|AEA54039.1| GTP pyrophosphokinase [Lactobacillus casei LC2W]
gi|327385760|gb|AEA57234.1| GTP pyrophosphokinase [Lactobacillus casei BD-II]
gi|410547500|gb|EKQ21733.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW1]
Length = 742
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 212/332 (63%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEG 349
>gi|334562930|ref|ZP_08515921.1| GTP pyrophosphokinase [Corynebacterium bovis DSM 20582]
Length = 754
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 162/399 (40%), Positives = 236/399 (59%), Gaps = 23/399 (5%)
Query: 159 AALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRA 218
A + LT N V G L + F A L D + +A+ AE HRG +R
Sbjct: 12 ARIARSLTGRSRVNPVLGPLIAVHRTFHPRADL-------DLLDRAYSTAEHLHRGVLRK 64
Query: 219 SGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGV 278
SG+PY+ H + A + A IG ++T + A LLHDT++D S + R FGA VA LV+GV
Sbjct: 65 SGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTEYSLADLERDFGAEVARLVDGV 124
Query: 279 SKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCK 337
+KL +++ EA+ + M +AMA D R ++IK++DRLHNM T+ LP K
Sbjct: 125 TKLDKVA--------LGSAAEAETIRKMIVAMAHDPRVLVIKVSDRLHNMRTMRFLPPEK 176
Query: 338 RQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF--DEAMVT 395
+ + A+ETLE+ PLA+RLG+++ K +LE+L F L P ++ E+ + + + +
Sbjct: 177 QAKKARETLEVIAPLAHRLGMASVKWELEDLAFAILYPKKYDEIVRLVADRAPKRDQYLA 236
Query: 396 SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDC 455
I++++ A++ +I+ V+ GR K +SI+ KM+ + DEI D+ G+R++VE+ DC
Sbjct: 237 GVIDEVQAAMRSSSITAEVV-GRPKHYWSIYQKMIVRGREFDEIFDLVGIRILVEDVRDC 295
Query: 456 YQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEF 515
Y A+ VH L+ +PG+ KDYI+ P+F Y+SLHT V G PLEVQIRT EMH AEF
Sbjct: 296 YAAVGAVHSLYQPMPGRFKDYISSPRFGVYRSLHTTVIGPDAKPLEVQIRTYEMHHNAEF 355
Query: 516 GFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
G AAHWRYKE H ++ V QM W R +L WQ EA
Sbjct: 356 GIAAHWRYKETRGSHRGDNAEVDQMA-WMRQLLDWQKEA 393
>gi|313895497|ref|ZP_07829053.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320528880|ref|ZP_08029972.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|402302377|ref|ZP_10821491.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
gi|312975623|gb|EFR41082.1| GTP diphosphokinase [Selenomonas sp. oral taxon 137 str. F0430]
gi|320138510|gb|EFW30400.1| GTP diphosphokinase [Selenomonas artemidis F0399]
gi|400380596|gb|EJP33410.1| GTP diphosphokinase [Selenomonas sp. FOBRC9]
Length = 742
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 146/353 (41%), Positives = 217/353 (61%), Gaps = 13/353 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AHRGQ R SG+ Y++H + A +L + + + A LLHD ++D + +
Sbjct: 32 RAYQFAEKAHRGQARISGEAYIIHPLHVAYILTGLHMDDETICAALLHDVVEDTHATIEE 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG +A L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MEELFGKNIAVLIDGVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIMIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + KRQR A ETLE++ PLANRLGIS K++LE+LC ++L PD + L
Sbjct: 146 DRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPDAYYAL 205
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E A + +I ++ + L+D I + GR K YSI+ KM + ++ EI
Sbjct: 206 VEEVKHKRRERQAFILDSIRQIREKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEI 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V +G P
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTQG-DP 323
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 550
LE+QIRT MH +EFG AAHW+YKE Q + W R +++ Q E
Sbjct: 324 LEIQIRTHAMHRVSEFGVAAHWKYKESGKSIGAGGAADQKMSWLRQMVSLQKE 376
>gi|227534968|ref|ZP_03965017.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239631387|ref|ZP_04674418.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|301066581|ref|YP_003788604.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|417980818|ref|ZP_12621497.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|417986894|ref|ZP_12627458.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|417999269|ref|ZP_12639480.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|418002217|ref|ZP_12642339.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|418008131|ref|ZP_12648000.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|418010975|ref|ZP_12650746.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
gi|227187425|gb|EEI67492.1| GTP pyrophosphokinase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|239525852|gb|EEQ64853.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus paracasei subsp. paracasei 8700:2]
gi|300438988|gb|ADK18754.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus casei str. Zhang]
gi|410524265|gb|EKP99178.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
32G]
gi|410524329|gb|EKP99241.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
12A]
gi|410539545|gb|EKQ14073.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
T71499]
gi|410544645|gb|EKQ18966.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UCD174]
gi|410547359|gb|EKQ21594.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
UW4]
gi|410553554|gb|EKQ27557.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Lactobacillus casei
Lc-10]
Length = 742
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 212/332 (63%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPATVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AI+++E+AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIDEIEKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEG 349
>gi|317153777|ref|YP_004121825.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
gi|316944028|gb|ADU63079.1| RelA/SpoT family protein [Desulfovibrio aespoeensis Aspo-2]
Length = 726
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 224/362 (61%), Gaps = 18/362 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ + +AH G +R SG+PY+ H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLAEMQLDEATVAAGLLHDTVEDTQA 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAV 316
S D I FG+ VAD+V+GV+K+SQ+ + SK V+ A+ + + LAMA D R +
Sbjct: 81 SVDEIEEFFGSDVADIVDGVTKISQM-------DFESKAVQQAENIRKLILAMAEDIRVL 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ + K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD
Sbjct: 134 MVKLADRLHNMRTLEFMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLKPD 193
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+LS + E E + I+ + LK I V GR K L+SIH KM ++ L
Sbjct: 194 VFDQLSQAVSEHRASGEPYIDKVIDLINDMLKKNKIKGRVY-GRTKHLHSIHVKMEQQGL 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T DEI+D+ R+I+E+ +DCY L ++H +W VPG+ KDYI+ PK N YQSLH+ V G
Sbjct: 253 TFDEIYDLIAFRIILESVKDCYAVLGLIHSIWRPVPGRFKDYISIPKANMYQSLHSTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVE---WARWVLTWQ 548
+EVQIRT+EM+ AE+G AAHW+YKE G + S + E W R ++ WQ
Sbjct: 313 PDGERIEVQIRTEEMNRIAEYGVAAHWQYKEVGKGSKRARSADTRDAERYTWLRQIMDWQ 372
Query: 549 CE 550
E
Sbjct: 373 RE 374
>gi|296270031|ref|YP_003652663.1| (p)ppGpp synthetase I [Thermobispora bispora DSM 43833]
gi|296092818|gb|ADG88770.1| (p)ppGpp synthetase I, SpoT/RelA [Thermobispora bispora DSM 43833]
Length = 786
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 215/357 (60%), Gaps = 14/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ A HRGQ R SGDPY+ H + A +LA +G + + A LLHDT++D S
Sbjct: 84 LIERAYETAAYYHRGQKRKSGDPYITHPLAVATILAELGTDDETLCAALLHDTVEDTEYS 143
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ +A+ + M +AM+ D R ++I
Sbjct: 144 LEQLRADFGENIARLVDGVTKLDKVK--------YGDAAQAETVRKMIVAMSRDIRVLVI 195
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T+ +P KR++ ++ETLEIF PLA+RLG++T K +LE+L F L P ++
Sbjct: 196 KLADRLHNMRTMRYMPEEKRKQKSRETLEIFAPLAHRLGMNTIKWELEDLAFSMLYPKRY 255
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E++ + E + + IEK+ L++ I V+ GR K YSI+ KM+ K L
Sbjct: 256 DEIARMVFERAPRRDLYLQQVIEKVSADLREAKIKATVM-GRPKHYYSIYQKMIAKGLAF 314
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 315 DDIYDLVGIRVLVDTVRDCYAALGTIHARWKPVPGRFKDYIAMPKFNMYQSLHTTVIGPE 374
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
P+E+QIRT MH +AE+G AAHW+YKE + + W R +L WQ E+
Sbjct: 375 GKPIELQIRTHAMHKRAEYGVAAHWKYKEEMTASGGTKGKQADMAWLRQILDWQKES 431
>gi|229552374|ref|ZP_04441099.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
gi|229314276|gb|EEN80249.1| GTP diphosphokinase [Lactobacillus rhamnosus LMS2-1]
Length = 769
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 55 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 114
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 115 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 168
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 169 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 228
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 229 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 285
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 286 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 345
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 346 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 384
>gi|25028323|ref|NP_738377.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
gi|259507378|ref|ZP_05750278.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
gi|23493608|dbj|BAC18577.1| GTP pyrophosphokinase [Corynebacterium efficiens YS-314]
gi|259165003|gb|EEW49557.1| GTP diphosphokinase [Corynebacterium efficiens YS-314]
Length = 761
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 220/355 (61%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G +R SGDPY+ H + A + A IG ++T + A LLHDT++D S D
Sbjct: 57 RAYSTAERLHEGVVRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKYEEI 228
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I+++ L D NI VL GR K +SI+ KM+ + D+I
Sbjct: 229 VRLVADRSPSRDRYLKEIIDQVTAGLHDNNIPAEVL-GRPKHYWSIYQKMIVRGRDFDDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L+ +PG+ KDYI+ P+F Y+SLHT V G G P
Sbjct: 288 FDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYKSLHTTVMGPGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS---FVLQMVEWARWVLTWQCEA 551
LEVQ RT EMH AEFG AAHWRYKE H+ V QM W R +L WQ EA
Sbjct: 348 LEVQARTHEMHYNAEFGIAAHWRYKETKGSHTGDREEVDQMA-WMRQLLDWQKEA 401
>gi|199599338|ref|ZP_03212736.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|258508564|ref|YP_003171315.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385828226|ref|YP_005865998.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|385835394|ref|YP_005873168.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|421768716|ref|ZP_16205426.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|421771132|ref|ZP_16207793.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
gi|199589777|gb|EDY97885.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus rhamnosus HN001]
gi|257148491|emb|CAR87464.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|259649871|dbj|BAI42033.1| GTP pyrophosphokinase [Lactobacillus rhamnosus GG]
gi|355394885|gb|AER64315.1| relA/SpoT family protein [Lactobacillus rhamnosus ATCC 8530]
gi|411185565|gb|EKS52692.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP2]
gi|411186567|gb|EKS53691.1| GTP pyrophosphokinase , (p)ppGpp synthetase I [Lactobacillus
rhamnosus LRHMDP3]
Length = 741
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 356
>gi|335046678|ref|ZP_08539701.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|363896423|ref|ZP_09322974.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
gi|333760464|gb|EGL38021.1| GTP diphosphokinase [Oribacterium sp. oral taxon 108 str. F0425]
gi|361960709|gb|EHL13942.1| hypothetical protein HMPREF9624_01718 [Oribacterium sp. ACB7]
Length = 755
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 227/359 (63%), Gaps = 20/359 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ H+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 42 MITKAYEVAKEQHKEQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + + F VA LV+GV+KL++L+ N+ ++A+ L MF++MA D R ++I
Sbjct: 102 LEEVEKEFNPDVATLVDGVTKLTKLNL-----NSDKVEMQAENLRKMFVSMAKDIRVIII 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL+ KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ +
Sbjct: 157 KLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVY 216
Query: 379 TELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+L+ K+ E A+V E +E++ + NI GR K +SI+ KM+ +
Sbjct: 217 YDLADKVHFKREAREDRINAIVEEVREHIEESGIEANIK-----GRIKHFFSIYKKMVNQ 271
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
T+D+I+D++ +R+IVE+ DCY L V+H+++ +PG+ KDYI PK N YQSLHT V
Sbjct: 272 NKTIDQIYDLFAIRIIVESVRDCYAVLGVIHKMYRPIPGRFKDYIAMPKPNMYQSLHTTV 331
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
G VP E+QIRT EMH AEFG AAHW+YKE D + + + ++W +L WQ
Sbjct: 332 IGRDGVPFEIQIRTFEMHRTAEFGIAAHWKYKEQGGSDKKATETEMSKMKWLHEILEWQ 390
>gi|423078898|ref|ZP_17067574.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
gi|357548801|gb|EHJ30660.1| GTP diphosphokinase, partial [Lactobacillus rhamnosus ATCC 21052]
Length = 760
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 46 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNIT 105
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 106 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 159
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 160 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 219
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 220 YRIAHLMNSKRTE--REAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 276
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 277 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 336
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 337 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 375
>gi|256961538|ref|ZP_05565709.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|293384703|ref|ZP_06630558.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|293387403|ref|ZP_06631958.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|312908311|ref|ZP_07767275.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|312910615|ref|ZP_07769457.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
gi|256952034|gb|EEU68666.1| RelA/SpoT protein [Enterococcus faecalis Merz96]
gi|291078010|gb|EFE15374.1| GTP diphosphokinase [Enterococcus faecalis R712]
gi|291083194|gb|EFE20157.1| GTP diphosphokinase [Enterococcus faecalis S613]
gi|310625725|gb|EFQ09008.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 512]
gi|311289163|gb|EFQ67719.1| GTP diphosphokinase [Enterococcus faecalis DAPTO 516]
Length = 737
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 220/358 (61%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA AE+AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 26 ELVQKALTYAEKAHEGQVRQSGEPYIIHPIQVAGILAELHMDPHTVATGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG +A LV+GV+KL ++ + E A + M LAMA D R ++
Sbjct: 86 TLDDLKEEFGEDIAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVIM 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+ +++NP+Q
Sbjct: 140 VKLADRLHNMRTLKHLREDKQRRIAQETLEIYAPLAHRLGISRIKWELEDTALRYINPNQ 199
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + + DE A V A+E + A +D I + + GR K +YSI+ KM +K
Sbjct: 200 YYRIVNLMQSKRDEREAYVAEAVEDIRLATEDLEI-YAEIYGRPKHIYSIYRKMKDQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 259 FNEIYDLLAIRVIVDSIKDCYAVLGAIHTRWTPMPGRFKDYIAMPKANMYQSIHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+EVQIRT EMH AEFG AAHW YKEG + + + + V+W ++ Q E+
Sbjct: 319 KGNPVEVQIRTHEMHQIAEFGVAAHWAYKEGKAEKIETDELTKQVDWFHEIIELQDES 376
>gi|268319355|ref|YP_003293011.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
gi|262397730|emb|CAX66744.1| GTP pyrophosphokinase [Lactobacillus johnsonii FI9785]
Length = 749
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 207/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|410449683|ref|ZP_11303736.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|418743759|ref|ZP_13300118.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|418751581|ref|ZP_13307865.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|409968054|gb|EKO35867.1| putative GTP diphosphokinase [Leptospira santarosai str. MOR084]
gi|410016440|gb|EKO78519.1| putative GTP diphosphokinase [Leptospira sp. Fiocruz LV3954]
gi|410795154|gb|EKR93051.1| putative GTP diphosphokinase [Leptospira santarosai str. CBC379]
gi|456874475|gb|EMF89768.1| putative GTP diphosphokinase [Leptospira santarosai str. ST188]
Length = 674
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 254/470 (54%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V+KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VLKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|269836765|ref|YP_003318993.1| (p)ppGpp synthetase I SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
gi|269786028|gb|ACZ38171.1| (p)ppGpp synthetase I, SpoT/RelA [Sphaerobacter thermophilus DSM
20745]
Length = 748
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 218/357 (61%), Gaps = 6/357 (1%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A++AH G++R SGDPY+ H + A++LA + + + A LLHD ++D S
Sbjct: 49 LVRKAYEFADQAHAGKLRRSGDPYISHPLAVAIILAEMQLDQETLCAALLHDVIEDTDTS 108
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENN-TASKTVEADRLHTMFLAMAD-ARAVL 317
+ + FG +A LV+GV+KL ++ E++ T K +A+ L MFLAM D R VL
Sbjct: 109 VEELTTIFGERIARLVDGVTKLGRIRWATEEDSVTREKERQAESLRKMFLAMVDDVRVVL 168
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ +P K+ R A+ET+EI+ PLANRLGI K +LE+L ++L+P
Sbjct: 169 IKLADRLHNMRTLEHMPRAKQLRSAQETMEIYAPLANRLGIWQLKSELEDLALRYLDPQT 228
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + L E + I L +AL + I + R K + SI KM +K +
Sbjct: 229 YFSIKRALDRRGTDRERYLQRVINDLTKALAEAGIRAEI-SAREKHITSIARKMERKGRS 287
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ G+R+IV+ ++DCY AL V+H +W +PG+ DYI PK + YQS+HT V G
Sbjct: 288 FDEIYDVLGVRVIVDEKKDCYGALGVIHTMWHPIPGEFDDYIATPKESMYQSIHTAVLGP 347
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 552
PLE+QIRT EMH AE+G AAHWRYKEG + V + W R ++ W+ E +
Sbjct: 348 DGHPLEIQIRTAEMHHVAEYGIAAHWRYKEG-ARPDPNVEAKIAWLRQLMDWRDEVV 403
>gi|153854672|ref|ZP_01995922.1| hypothetical protein DORLON_01920 [Dorea longicatena DSM 13814]
gi|149752776|gb|EDM62707.1| RelA/SpoT family protein [Dorea longicatena DSM 13814]
Length = 781
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 227/360 (63%), Gaps = 13/360 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A +AH Q R SG+PY++H + A++LA + + +AAG+LHD ++D + +
Sbjct: 69 KAYKLAVKAHGDQRRKSGEPYIIHPLWVAIILADLEMDKETIAAGMLHDVVEDTKFTEED 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 129 IRREFGDEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 183
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 184 DRLHNMRTLQFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFYDL 243
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ + E V +E++ +K+ NI V GR K +SI+ KM+ + T+D+I
Sbjct: 244 VNQINARKTEREEFVEQIVEEVSTHMKNANIKAEV-NGRVKHFFSIYKKMVNQDKTVDQI 302
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IVE+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P
Sbjct: 303 YDLFAVRIIVESVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP 362
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 556
E+QIRT+EMH AE+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 363 FEIQIRTEEMHKTAEYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|418070749|ref|ZP_12708024.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
gi|357540169|gb|EHJ24186.1| GTP pyrophosphokinase [Lactobacillus rhamnosus R0011]
Length = 741
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDKNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWELEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 356
>gi|295426083|ref|ZP_06818753.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
gi|295064252|gb|EFG55190.1| GTP diphosphokinase [Lactobacillus amylolyticus DSM 11664]
Length = 749
Score = 280 bits (717), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LAA+G + +AAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIMHPTQVAGTLAALGLDPDTIAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDDIKKEFGEDVAFIVDGVTKLNKYQY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP+ +
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNPEAY 200
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + E ++ AI L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 YRIVNLVAVKRSEREKYISDAISVLKKTLDNLGIKYEIY-GRPKHIYSIYKKMVNKHKDF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G G
Sbjct: 260 DEIYDLLAVRVIVKTVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTIIGPG 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 320 GRPLEIQIRTQQMHEVAEYGVAAHWAYKRGN 350
>gi|334119644|ref|ZP_08493729.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
gi|333457806|gb|EGK86427.1| (p)ppGpp synthetase I, SpoT/RelA [Microcoleus vaginatus FGP-2]
Length = 758
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 154/365 (42%), Positives = 221/365 (60%), Gaps = 14/365 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+ + +AF A H GQ R SG+PY+ H V A +L +G N+ ++AAG LHD ++D
Sbjct: 44 DSLICRAFEFARDLHEGQYRKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTD 103
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARA 315
++ + I + FGA V LVEGV+KLS+ N +SKT A+ MFLAMA D R
Sbjct: 104 ITLEEIEQRFGAEVRQLVEGVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRV 156
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TL+ L K++ A ET +IF PLANRLGI +K +LE+L FK+L P
Sbjct: 157 IVVKLADRLHNMRTLEHLSEEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEP 216
Query: 376 DQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + E+ + E E + + L + L + I + GR K LY I+ KM +++
Sbjct: 217 EAYREIQELVAEKRADRETQLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYGKMQRRQ 276
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
++++DI +R+IVE+ +DCY+AL +VH + +PG+ KDYI PK N YQSLHT V
Sbjct: 277 KGFNQVYDIAAVRIIVESNDDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVI 336
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEA 551
G P+EVQIRT MH AE+G AAHW+YKE +++ + W R +L WQ +
Sbjct: 337 GTSGRPIEVQIRTVAMHHIAEYGIAAHWKYKETGGSNTTVTGDDEKFTWLRQLLEWQSD- 395
Query: 552 MSKDR 556
+ DR
Sbjct: 396 LKDDR 400
>gi|421074132|ref|ZP_15535173.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
gi|392527799|gb|EIW50884.1| RelA/SpoT family protein [Pelosinus fermentans JBW45]
Length = 736
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 178/469 (37%), Positives = 253/469 (53%), Gaps = 45/469 (9%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V +A+ A AH+GQ RASG+ Y+ H + A +LA + ++ ++A LLHD ++D S
Sbjct: 27 IVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILAELQIDALTISASLLHDVVEDTAFS 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + + FG VA LV+GV+KLS++ ++E + + MFLAMA D R VLI
Sbjct: 87 LEELEKLFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL +P K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++
Sbjct: 141 KLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL K+ + E ++ AI+ L L D I + GR K YSI+ KMLK +
Sbjct: 201 YELVEKVKQKRREREQLINEAIKILSTRLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDL 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R++V+ +DCY AL VVH LW +P + KDYI PK N YQSLHT V
Sbjct: 260 SEIYDLSAVRILVDTVKDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTE 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 556
PLE+QIRT +MH +E+G AAHWRYKEG + + + W R + WQ
Sbjct: 320 GQPLEIQIRTMDMHRTSEYGIAAHWRYKEGSKGANKDFDEKLTWLRQLSEWQ-------- 371
Query: 557 SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 616
++ P F FS VFV + D V + P ST +D
Sbjct: 372 ------QDLRDPHEFMETVKMDIFS--------DEVFVFTPKGD---VIDLPAGSTPIDF 414
Query: 617 LERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPA 665
R G + R+N K + KL GD+VE+ +
Sbjct: 415 AYRIHTGVGNRC---------VGARINGKMI-PLETKLTNGDIVEIVTS 453
>gi|258539745|ref|YP_003174244.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
gi|257151421|emb|CAR90393.1| GTP pyrophosphokinase [Lactobacillus rhamnosus Lc 705]
Length = 741
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/339 (44%), Positives = 213/339 (62%), Gaps = 14/339 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A H+ Q+R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVEKAYKFAAYVHKDQVRKSGEPYIIHPIQVAGILAELKMDPETVASGYLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS+++ +A ++ A M LAMA D R +++
Sbjct: 87 LGDIEEVFGHDVAVIVDGVTKLSKVTYVAHKDELAENH------RKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIST K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLQHLRPDKQRRIANETLEIYAPLADRLGISTIKWKLEDLSLRYLNPQQY 200
Query: 379 TELS----SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ SK E EA + AIE++++AL D +I + + GR K +YSI+ KM K
Sbjct: 201 YRIAHLMNSKRTER--EAYIQEAIEEIKKALADLHIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
DE++D+ +R+I E +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDELYDLLAIRVITETIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANLYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
PLEVQIRT+EMH AE+G AAHW YKEG +
Sbjct: 318 PMGKPLEVQIRTEEMHHVAEYGVAAHWAYKEGQTSKVQY 356
>gi|417837430|ref|ZP_12483668.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
gi|338760973|gb|EGP12242.1| GTP pyrophosphokinase , ppGpp synthetase I [Lactobacillus johnsonii
pf01]
Length = 749
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 207/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|282881989|ref|ZP_06290630.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
gi|281298019|gb|EFA90474.1| GTP diphosphokinase [Peptoniphilus lacrimalis 315-B]
Length = 711
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 222/355 (62%), Gaps = 20/355 (5%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
I++ YE A+ H+GQ R SG+ Y++H + AM+LA + +S + AGLLHDT++D ++Y
Sbjct: 22 IRSAYELAKVNHQGQKRNSGEDYIIHPLHVAMILADMNMDSATIIAGLLHDTIEDTSVTY 81
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I + FG +A+LV+GV+KL +L N + +A+ + M LAMA D R +++K
Sbjct: 82 EDIEKKFGKEIAELVDGVTKLKKL------NYKSKAEKQAENIRKMVLAMAKDIRVIIVK 135
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL+ + K+ A ETLEI+ P+A+RLG+S K +LE+L ++L+PD++
Sbjct: 136 LADRLHNMRTLEYMTEAKKIEKATETLEIYAPIADRLGMSRVKWELEDLSLRYLDPDEY- 194
Query: 380 ELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
KLV+ + E ++ S I+ L+ L+ I + GR K+ YSI+ KM K
Sbjct: 195 ---YKLVDMVNKRRKEREELINSIIDTLKVNLERVGIK-CEINGRPKNFYSIYKKMKVKG 250
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
DEI+D+ +R++ + +DCY AL VVH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 251 KVFDEIYDLSAVRILTNDIKDCYGALGVVHTLWKPIPGRFKDYIAMPKPNNYQSLHTTVI 310
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
EVQIRT +MH AE+G AAHW+YK G + +SF + + W R ++ WQ
Sbjct: 311 DNNGETFEVQIRTYQMHQTAEYGIAAHWKYKTGQTKTTSFD-ENLTWLRQLMEWQ 364
>gi|227890126|ref|ZP_04007931.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
gi|227849301|gb|EEJ59387.1| GTP diphosphokinase [Lactobacillus johnsonii ATCC 33200]
Length = 749
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 207/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|238926103|ref|ZP_04657863.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
gi|238885993|gb|EEQ49631.1| GTP diphosphokinase [Selenomonas flueggei ATCC 43531]
Length = 739
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 218/360 (60%), Gaps = 23/360 (6%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+++A+ A AHRGQ R SG+PY++H + A +L + + + A LHD ++D +
Sbjct: 29 IVRAYEFAANAHRGQERVSGEPYIVHPMHVAYILTTLHLDDETICAAFLHDVVEDTQTTL 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I FG V L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 89 EEIEAVFGKNVMTLIDGVTKLGRIESMSKED------VKLENYRKMFLAMAKDIRVIMIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + KRQR A+ETLE++ PLANRLGIS K +LE+LC ++L P+ +
Sbjct: 143 LADRLHNMRTLKYMREDKRQRIARETLEVYAPLANRLGISGIKAELEDLCLRYLEPEAYY 202
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L ++ + E + A++K+ L+ I + GR K YSI+ KM + +++
Sbjct: 203 TLVEEVKQKRRERQEFIQDAVQKIRAQLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSIN 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V EG
Sbjct: 262 EIYDLSAVRVLVSTVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTEG- 320
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRTK MH +EFG AAHW+YKE GD Q + W R +++ Q E
Sbjct: 321 DPLEIQIRTKAMHQISEFGIAAHWKYKEAGRSVGAGDEND-----QKMSWLRQMVSLQKE 375
>gi|403237624|ref|ZP_10916210.1| GTP pyrophosphokinase [Bacillus sp. 10403023]
Length = 729
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 223/361 (61%), Gaps = 15/361 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ +A+ AE AH+ Q R SG+PY++H V+ A +L + + + +A G LHD ++D +
Sbjct: 26 EFIKRAYKFAEEAHKEQFRKSGEPYIIHPVQVAGILVDLEMDPSTIAGGFLHDVVEDTNV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I F + VA LV+GV+KL ++ ++E +A+ MF+AMA D R +L
Sbjct: 86 TLQEISDAFSSEVAMLVDGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAHRLGISRIKWELEDTALRYLNPQQ 199
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 434
+ + + + + A +E++ + +KD+ + + GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKK--KRAEREEYLEEVIKEVKDRVDEVSIKADISGRPKHIYSIYRKMVLQNK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 258 QFNEIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQCEAM 552
PLEVQIRT EMH AE+G AAHW YKEG Q SSF ++ W R +L WQ +A
Sbjct: 318 PKGDPLEVQIRTVEMHQIAEYGIAAHWAYKEGKQVNQQSSFEEKLT-WFREILEWQNDAT 376
Query: 553 S 553
+
Sbjct: 377 N 377
>gi|295106146|emb|CBL03689.1| (p)ppGpp synthetase, RelA/SpoT family [Gordonibacter pamelaeae
7-10-1-b]
Length = 802
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/354 (42%), Positives = 219/354 (61%), Gaps = 10/354 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KAF A AH GQ R SG+P++ H VE A++LA + + + A LLHDT++D ++
Sbjct: 79 LLAKAFQFASEAHEGQCRKSGEPFVAHPVEVAIILADLRMDVETLCAALLHDTVEDTCVT 138
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LVEGV+K++++ + + A+ + MF+AM+ D R ++I
Sbjct: 139 TEQVAVEFNEQVAQLVEGVTKITRIEVESLSDEQAAT------IRKMFVAMSKDIRVIVI 192
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL AL +R A+ETLEI+ P+A+RLGI+ K +LE+L F +L P+++
Sbjct: 193 KLADRLHNMRTLGALREDRRIFKARETLEIYAPIAHRLGINNIKWELEDLSFYYLEPNKY 252
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++S + E E + I L ++ I+ ++ GR K LYSI+ KM +K
Sbjct: 253 KQVSRMVTESRAEREGYLDQIIGILHDEMEKVGITAQIM-GRPKHLYSIYQKMTQKGKGF 311
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV + +DCY AL VH LW +PG+ KDYI PK+N YQSLHT V G
Sbjct: 312 SEIYDLIAVRIIVPSVKDCYLALGAVHTLWHPMPGRFKDYIAMPKYNMYQSLHTTVIGPA 371
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT++MH Q+E+G AAHWRYKE + + Q + W R ++ WQ E
Sbjct: 372 GRPLEVQIRTEDMHRQSEYGVAAHWRYKEKGGKSGDAIDQQLAWLRQMVDWQDE 425
>gi|42519264|ref|NP_965194.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|385825782|ref|YP_005862124.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
gi|41583552|gb|AAS09160.1| GTP pyrophosphokinase [Lactobacillus johnsonii NCC 533]
gi|329667226|gb|AEB93174.1| GTP pyrophosphokinase [Lactobacillus johnsonii DPC 6026]
Length = 749
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 207/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A++AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKKAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAISTLKQTLDSLGIKYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ +DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVKDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|404258414|ref|ZP_10961733.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
gi|403402928|dbj|GAC00143.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia namibiensis NBRC
108229]
Length = 784
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 80 RAYDVAEERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 139
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 140 LERDFGQEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 191
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 192 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 251
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL IS V GR K +SI+ KM+ K D+I
Sbjct: 252 VRLVADRAPSRDTYLARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGRDFDDI 310
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G P
Sbjct: 311 HDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKP 370
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 371 LEVQIRTHEMHRTAEFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 427
>gi|427405631|ref|ZP_18895836.1| RelA/SpoT family protein [Selenomonas sp. F0473]
gi|425708472|gb|EKU71511.1| RelA/SpoT family protein [Selenomonas sp. F0473]
Length = 742
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 221/360 (61%), Gaps = 19/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AE+AHRGQ R SG+ Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIERAYRFAEKAHRGQARISGEAYIIHPLNVAYILTGLHMDDETICAALLHDVVEDTHA 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG +A L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TIEEMEELFGKNIAALIDGVTKLGRIQYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + KRQR A ETLE++ PLANRLGIS K++LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRQRIAHETLEVYAPLANRLGISNIKIELEDLCLRYLEPEA 201
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L ++ E + +I ++++ L+D I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRQERQEFILDSIRQIKEKLEDAGIEAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTH 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
G PLE+QIRT MH +EFG AAHW+YKE G S Q + W R +++ Q E
Sbjct: 321 G-DPLEIQIRTHAMHRISEFGVAAHWKYKEAGKSTGATDESD---QKMSWLRQMVSLQKE 376
>gi|424845459|ref|ZP_18270070.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
gi|363986897|gb|EHM13727.1| (p)ppGpp synthetase, RelA/SpoT family [Jonquetella anthropi DSM
22815]
Length = 762
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 233/419 (55%), Gaps = 37/419 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +AF A AH QMR G+PY++H V A +LA + + + A LLHD L+D +
Sbjct: 67 VGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTA 126
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG V LV+GV+KL +L E+ +A+ L MFL MA D R VLIK
Sbjct: 127 EQMRERFGEVVTTLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIK 180
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADR HNM +L A+ K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ +
Sbjct: 181 LADRTHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYY 240
Query: 380 ELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E+ SK+ + EA+V A+E L+ L + I + GR K YSI+ KM +KKL++D
Sbjct: 241 EIKSKVKKRLPEREAVVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSID 299
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+++D+ LR+IVE+ CY L VVH +W +PG+ DYI PK N YQSLHT V G
Sbjct: 300 QLYDLLALRVIVEDVAQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVLGPSG 359
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 557
PLEVQIRT MH +AE+G AAHWRYKEGD H + +EW R L E S++
Sbjct: 360 EPLEVQIRTWAMHWRAEYGVAAHWRYKEGDS-HVDDLDSKLEWIRRALEGSDETNSEE-- 416
Query: 558 CVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 616
F D + VFV E D V+ P STV+D
Sbjct: 417 -------------FMERLKDDVLT--------SDVFVFTPEGD---VKNLPRGSTVVDF 451
>gi|227879058|ref|ZP_03996948.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256843052|ref|ZP_05548540.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256850296|ref|ZP_05555725.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|262046025|ref|ZP_06018989.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|293381310|ref|ZP_06627313.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|312977236|ref|ZP_07788984.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|423318875|ref|ZP_17296752.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
gi|227861353|gb|EEJ68982.1| GTP diphosphokinase [Lactobacillus crispatus JV-V01]
gi|256614472|gb|EEU19673.1| ppGpp synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256712933|gb|EEU27925.1| ppGpp synthetase [Lactobacillus crispatus MV-1A-US]
gi|260573984|gb|EEX30540.1| ppGpp synthetase [Lactobacillus crispatus MV-3A-US]
gi|290922126|gb|EFD99125.1| GTP diphosphokinase [Lactobacillus crispatus 214-1]
gi|310895667|gb|EFQ44733.1| GTP diphosphokinase [Lactobacillus crispatus CTV-05]
gi|405591738|gb|EKB65207.1| RelA/SpoT family protein [Lactobacillus crispatus FB049-03]
Length = 746
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHKVAEYGVAAHWAYKRGN 350
>gi|90023337|ref|YP_529164.1| GTP diphosphokinase [Saccharophagus degradans 2-40]
gi|89952937|gb|ABD82952.1| RelA/SpoT family protein [Saccharophagus degradans 2-40]
Length = 702
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 219/353 (62%), Gaps = 12/353 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+Y AE+AH GQ R SG+PY+ H + A +LA++ + + A +LHD ++D +
Sbjct: 23 VKRAYYYAEQAHTGQYRRSGEPYITHPLAVANILASVHMDHQSLMAAMLHDVIEDTGIGK 82
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I FG+ VAD+V+GVSKL+++ E T ++ +A M LAMA D R +++K
Sbjct: 83 QAIADQFGSTVADIVDGVSKLAKI-----EYETQAEK-QAKNFQKMALAMAQDLRVIVVK 136
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
L+DRLHNM TL ALP K++R AKETLEI+ P+A+RLG++ W+++ E+ F ++P + +
Sbjct: 137 LSDRLHNMRTLGALPPEKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRAS 196
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L + L E +A+V +E L+ +NI LV+ GR K LYSI+ KM K +
Sbjct: 197 RLQASLSEVRGNRKALVEKIQSGIETRLQRENIDGLVI-GREKHLYSIYNKMRSKHKSFK 255
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI D+Y R+IVE+ + CY+AL +H L+ PG+ KDYI PK NGYQSLHT+V G
Sbjct: 256 EIMDVYAFRIIVEDIDTCYRALGAIHNLYKPKPGEFKDYIAIPKENGYQSLHTIVIGVRG 315
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQ 548
VP+EVQIRTKEM + G AAHW YK D HS + W + +L Q
Sbjct: 316 VPIEVQIRTKEMDELSSRGVAAHWLYKSNDVNSVHSGSYDRANRWIKRLLEIQ 368
>gi|253699682|ref|YP_003020871.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter sp. M21]
gi|251774532|gb|ACT17113.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter sp. M21]
Length = 716
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 219/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLDLAAVVTGLLHDTVEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+ K+ + E + V + E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLAGKVAKKKQERESYVATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ +R+ VE+ +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 IDEIYDLIAIRVSVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 YGERMEVQIRTVEMHRVAESGIAAHWKYKEGKGYDEKDVKRFT-WIRQLLEWQQE 367
>gi|423321551|ref|ZP_17299422.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
gi|405594489|gb|EKB67900.1| RelA/SpoT family protein [Lactobacillus crispatus FB077-07]
Length = 746
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLNELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHKVAEYGVAAHWAYKRGN 350
>gi|317508687|ref|ZP_07966342.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
gi|316253008|gb|EFV12423.1| RelA/SpoT family protein [Segniliparus rugosus ATCC BAA-974]
Length = 797
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 221/358 (61%), Gaps = 16/358 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ AE H+GQ R SGDPY+ H + A +LA +G ++ + A LLHDT++D S
Sbjct: 92 LLAKAYEIAEVRHKGQFRRSGDPYITHPLAVAHILAELGMDTLSLVAALLHDTVEDTGYS 151
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FG+ VA +V+GV+KL ++ T EA+ + M +AMA D R ++I
Sbjct: 152 LEELERDFGSDVAHIVDGVTKLDKV--------TWGAGAEAETIRKMVIAMARDPRVLVI 203
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ +P K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++
Sbjct: 204 KVADRLHNMRTMRFMPPEKQVRKAQETLEVIAPLAHRLGMASVKWELEDLAFAVLHPKKY 263
Query: 379 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLT 435
E+ +LV + T + +++ L+ SF V + GR K +SI+ KM+ K
Sbjct: 264 AEIV-RLVADRAPSRDTY-LARVKGELQSALSSFRVDAKVAGRPKHYWSIYQKMIVKGRD 321
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHD+ GLR++ DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G
Sbjct: 322 FDDIHDLVGLRVVCGEVRDCYAAVGVVHSLWQPLPGRFKDYIAQPRYGVYQSLHTTVIGP 381
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RTKEMH AEFG AAHWRYKE G S + + W R +L WQ EA
Sbjct: 382 EGKPLEVQLRTKEMHRVAEFGIAAHWRYKENKGKVGSDSAEVDRMAWMRQLLDWQREA 439
>gi|260655712|ref|ZP_05861185.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
gi|260629629|gb|EEX47823.1| GTP diphosphokinase [Jonquetella anthropi E3_33 E1]
Length = 762
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 175/419 (41%), Positives = 233/419 (55%), Gaps = 37/419 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +AF A AH QMR G+PY++H V A +LA + + + A LLHD L+D +
Sbjct: 67 VGEAFVFAAGAHGEQMRMGGEPYIIHPVFAASILADMKLDVATLQAALLHDVLEDTECTA 126
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG V LV+GV+KL +L E+ +A+ L MFL MA D R VLIK
Sbjct: 127 EQMRERFGEVVTTLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIK 180
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADR HNM +L A+ K+ R AKETLEI+ PLA+RLGI K LE+L FK+ +P+ +
Sbjct: 181 LADRAHNMRSLGAMRRDKQIRTAKETLEIYAPLAHRLGIYQMKRTLEDLAFKYYDPEMYY 240
Query: 380 ELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E+ SK+ + EA+V A+E L+ L + I + GR K YSI+ KM +KKL++D
Sbjct: 241 EIKSKVKKRLPEREAVVEQALEILQARLDEMGIKNSI-KGRAKHFYSIYEKMNRKKLSID 299
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+++D+ LR+IVE+ CY L VVH +W +PG+ DYI PK N YQSLHT V G
Sbjct: 300 QLYDLLALRVIVEDVAQCYSVLGVVHTIWKPIPGQFDDYIANPKNNMYQSLHTTVLGPSG 359
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 557
PLEVQIRT MH +AE+G AAHWRYKEGD H + +EW R L E S++
Sbjct: 360 EPLEVQIRTWAMHWRAEYGVAAHWRYKEGDS-HVDDLDSKLEWIRRALEGSDETNSEE-- 416
Query: 558 CVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 616
F D + VFV E D V+ P STV+D
Sbjct: 417 -------------FMERLKDDVLT--------SDVFVFTPEGD---VKNLPRGSTVVDF 451
>gi|422485252|ref|ZP_16561614.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
gi|327445780|gb|EGE92434.1| GTP diphosphokinase [Propionibacterium acnes HL043PA2]
Length = 774
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|72383394|ref|YP_292749.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL2A]
gi|72003244|gb|AAZ59046.1| metal dependent phosphohydrolase [Prochlorococcus marinus str.
NATL2A]
Length = 775
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 214/352 (60%), Gaps = 16/352 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF A + H+GQ R SG+PY+ H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDLAYQLHKGQFRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ + + FG+ V LVEGV+KL + NN +A+ L MFLAM+ D R V
Sbjct: 126 ITPEQLEGYFGSEVRYLVEGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ L K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTISYLGEEKQTRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPD 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + ++ L+ L + + GR K LY I KM ++K
Sbjct: 240 PFREIQQQIASKRSEREERLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ LR+IV + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 EFHEIFDVAALRIIVSDVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
P+EVQIRT EMH +EFG AAHW+YKEG D + +++ Q+VEW
Sbjct: 360 RHR-PIEVQIRTPEMHRVSEFGIAAHWKYKEGGSPANPDSEKFNWLRQLVEW 410
>gi|386775351|ref|ZP_10097729.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
paraconglomeratum LC44]
Length = 805
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 152/361 (42%), Positives = 221/361 (61%), Gaps = 18/361 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ V +A+ AERAHRGQ R SGDPY+ H V A +LA +G+ + VVAA LLHDT++D
Sbjct: 78 QELVRQAYTVAERAHRGQTRRSGDPYITHPVSVATILAELGSPADVVAAALLHDTVEDTD 137
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
S D + FG +A +V+GV+KL ++ T + +A+ + M +AM+ D R +
Sbjct: 138 YSLDQLRAEFGEVIAVMVDGVTKLDKV--------TYGEAAQAETVRKMIVAMSRDVRVL 189
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHN T +P +R AKETLEI+ PLA+RLG++T K +LE+ F+ L P
Sbjct: 190 LIKLADRLHNARTWKYVPAASAERKAKETLEIYAPLAHRLGLNTMKWELEDRSFQVLYPK 249
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ S + + E +++ ++++ LK I V GR K YSI+ KM+ +
Sbjct: 250 VYEEIVSLVAQHAPAREQYLSTVSSQIQEDLKKARIKAEV-TGRPKHYYSIYQKMIVRGR 308
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+I+D+ G+R++V+ DCY L +H W+ V G+ KDYI PKFN YQSLHT V G
Sbjct: 309 DFSDIYDLVGVRVLVDTVRDCYGVLGTLHARWSPVQGRFKDYIALPKFNLYQSLHTTVIG 368
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYK-----EGDCQHSSFVLQMVEWARWVLTWQC 549
P+EVQIRT+EMH +AE+G AAHW+YK +G + S+ + W R ++ WQ
Sbjct: 369 PTGKPVEVQIRTREMHRRAEYGVAAHWKYKAMAGGQGGGE-SAAITNDAAWLRQLMDWQK 427
Query: 550 E 550
E
Sbjct: 428 E 428
>gi|422558365|ref|ZP_16634105.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
gi|328753279|gb|EGF66895.1| GTP diphosphokinase [Propionibacterium acnes HL025PA2]
Length = 774
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|289427301|ref|ZP_06429016.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|354607125|ref|ZP_09025095.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|386024111|ref|YP_005942416.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|407935561|ref|YP_006851203.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|417929159|ref|ZP_12572543.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|422384764|ref|ZP_16464899.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|422388618|ref|ZP_16468721.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|422392957|ref|ZP_16473010.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|422424630|ref|ZP_16501580.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|422430858|ref|ZP_16507737.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|422449215|ref|ZP_16525940.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|422462028|ref|ZP_16538652.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|422474898|ref|ZP_16551362.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|422478227|ref|ZP_16554650.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|422480763|ref|ZP_16557166.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|422483265|ref|ZP_16559654.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|422488505|ref|ZP_16564834.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|422490606|ref|ZP_16566921.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|422498374|ref|ZP_16574646.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|422506137|ref|ZP_16582360.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|422508247|ref|ZP_16584428.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|422513517|ref|ZP_16589640.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|422518763|ref|ZP_16594831.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|422522018|ref|ZP_16598048.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|422527406|ref|ZP_16603396.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|422529839|ref|ZP_16605805.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|422534482|ref|ZP_16610406.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|422537214|ref|ZP_16613102.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|422552107|ref|ZP_16627898.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|422554043|ref|ZP_16629815.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|422560824|ref|ZP_16636511.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|422568522|ref|ZP_16644140.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|289159500|gb|EFD07689.1| GTP diphosphokinase [Propionibacterium acnes J165]
gi|313771968|gb|EFS37934.1| GTP diphosphokinase [Propionibacterium acnes HL074PA1]
gi|313807661|gb|EFS46148.1| GTP diphosphokinase [Propionibacterium acnes HL087PA2]
gi|313810168|gb|EFS47889.1| GTP diphosphokinase [Propionibacterium acnes HL083PA1]
gi|313818698|gb|EFS56412.1| GTP diphosphokinase [Propionibacterium acnes HL046PA2]
gi|313820468|gb|EFS58182.1| GTP diphosphokinase [Propionibacterium acnes HL036PA1]
gi|313822726|gb|EFS60440.1| GTP diphosphokinase [Propionibacterium acnes HL036PA2]
gi|313825340|gb|EFS63054.1| GTP diphosphokinase [Propionibacterium acnes HL063PA1]
gi|313830499|gb|EFS68213.1| GTP diphosphokinase [Propionibacterium acnes HL007PA1]
gi|313833535|gb|EFS71249.1| GTP diphosphokinase [Propionibacterium acnes HL056PA1]
gi|314925077|gb|EFS88908.1| GTP diphosphokinase [Propionibacterium acnes HL036PA3]
gi|314960386|gb|EFT04488.1| GTP diphosphokinase [Propionibacterium acnes HL002PA2]
gi|314973499|gb|EFT17595.1| GTP diphosphokinase [Propionibacterium acnes HL053PA1]
gi|314976179|gb|EFT20274.1| GTP diphosphokinase [Propionibacterium acnes HL045PA1]
gi|314978562|gb|EFT22656.1| GTP diphosphokinase [Propionibacterium acnes HL072PA2]
gi|314983799|gb|EFT27891.1| GTP diphosphokinase [Propionibacterium acnes HL005PA1]
gi|314987980|gb|EFT32071.1| GTP diphosphokinase [Propionibacterium acnes HL005PA2]
gi|314989790|gb|EFT33881.1| GTP diphosphokinase [Propionibacterium acnes HL005PA3]
gi|315080497|gb|EFT52473.1| GTP diphosphokinase [Propionibacterium acnes HL078PA1]
gi|315085511|gb|EFT57487.1| GTP diphosphokinase [Propionibacterium acnes HL002PA3]
gi|315088432|gb|EFT60408.1| GTP diphosphokinase [Propionibacterium acnes HL072PA1]
gi|315096046|gb|EFT68022.1| GTP diphosphokinase [Propionibacterium acnes HL038PA1]
gi|327326326|gb|EGE68116.1| GTP diphosphokinase [Propionibacterium acnes HL096PA2]
gi|327331799|gb|EGE73536.1| GTP diphosphokinase [Propionibacterium acnes HL096PA3]
gi|327443576|gb|EGE90230.1| GTP diphosphokinase [Propionibacterium acnes HL013PA2]
gi|327448237|gb|EGE94891.1| GTP diphosphokinase [Propionibacterium acnes HL043PA1]
gi|328753331|gb|EGF66947.1| GTP diphosphokinase [Propionibacterium acnes HL020PA1]
gi|328760712|gb|EGF74278.1| GTP diphosphokinase [Propionibacterium acnes HL099PA1]
gi|332675569|gb|AEE72385.1| GTP pyrophosphokinase [Propionibacterium acnes 266]
gi|340773282|gb|EGR95774.1| GTP diphosphokinase [Propionibacterium acnes SK182]
gi|353557240|gb|EHC26609.1| hypothetical protein HMPREF1003_01662 [Propionibacterium sp.
5_U_42AFAA]
gi|407904142|gb|AFU40972.1| GTP pyrophosphokinase [Propionibacterium acnes C1]
gi|456739915|gb|EMF64454.1| GTP pyrophosphokinase [Propionibacterium acnes FZ1/2/0]
Length = 774
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|167629913|ref|YP_001680412.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
gi|167592653|gb|ABZ84401.1| GTP pyrophosphokinase [Heliobacterium modesticaldum Ice1]
Length = 736
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 216/355 (60%), Gaps = 10/355 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+FV +AF A+ AH GQ+R SG+PY+ H + A +LA + + +AAGLLHD ++D +
Sbjct: 23 EFVRRAFEYADAAHTGQLRKSGEPYIYHPMAVAYILADLELDVATIAAGLLHDVVEDTAI 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + + FG VA +V+GV+KLS+L +++ + + L MFLAMA D R +L
Sbjct: 83 TQEQLEKDFGPEVALMVDGVTKLSRLEFHSKQEQ------QVESLRKMFLAMAKDIRVIL 136
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL K++ A ET+E+F PLANRLGIS K +LE+L ++L P+
Sbjct: 137 IKLADRLHNMRTLKHQTPEKQREIAIETIELFAPLANRLGISRIKWELEDLALRYLEPET 196
Query: 378 HTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L +++ E + I L + L I + GR K YSI+ KM +K
Sbjct: 197 YYDLVTRIATKRAEREERINEIIAILREKLAAVGIKAEI-SGRPKHFYSIYRKMTSQKKD 255
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ EI+D+ +R++V++ +DCY AL ++H +W +P + KDYI PK N YQSLHT + G
Sbjct: 256 LSEIYDLIAVRVLVDSVKDCYGALGIIHTIWKPIPMRFKDYIATPKTNMYQSLHTTLVGP 315
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P EVQIRT EMH AE+G AAHW+YKEG + + W R +L WQ +
Sbjct: 316 LGEPFEVQIRTAEMHRTAEYGIAAHWKYKEGGKTQGRSFEEKLAWLRQLLEWQSD 370
>gi|169831064|ref|YP_001717046.1| (p)ppGpp synthetase I SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
gi|169637908|gb|ACA59414.1| (p)ppGpp synthetase I, SpoT/RelA [Candidatus Desulforudis
audaxviator MP104C]
Length = 712
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 158/355 (44%), Positives = 221/355 (62%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ A+ AH Q R SG+ +++H +E A +LA + + V GLLHD ++DA +
Sbjct: 21 FIQRAYEFAQEAHHNQKRISGEDFIVHPLEVAQILAELELDLESVVGGLLHDVIEDAGIE 80
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA LV+GV+KL +L+ ++E +A+ L M LAMA D R +LI
Sbjct: 81 LCVIREEFGDEVALLVDGVTKLRRLAYRSKEEQ------QAENLRKMLLAMAKDVRVILI 134
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL + K++ A+ETLEIF PLA+RLGI K +LE++ F+ P++H
Sbjct: 135 KLADRLHNLRTLQYHTVPKQREIAQETLEIFAPLAHRLGIYRIKSELEDIAFRFREPERH 194
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL+ +L E + I+ L++ L I+ + GR K LYSI+ KML ++ +
Sbjct: 195 EELTRRLSATRSVREGYIGGVIKILQEKLGGMGITADI-QGRPKHLYSIYQKMLAQEKDL 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-E 495
+EI DI G+R++VE+ +DCY L VVH LW VPG+ KDYI PK N YQSLHT V G E
Sbjct: 254 EEIFDILGIRILVESVKDCYATLGVVHTLWKPVPGRFKDYIAMPKSNMYQSLHTSVVGPE 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G V LE+Q+RT +MH AE+G AAHWRYK G +F ++ W R +L WQ E
Sbjct: 314 GEV-LEIQVRTWDMHRTAEYGIAAHWRYKSGTRADPAFDEKLA-WLRQLLEWQHE 366
>gi|363899872|ref|ZP_09326379.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|395210307|ref|ZP_10399227.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
gi|361957535|gb|EHL10843.1| hypothetical protein HMPREF9625_01039 [Oribacterium sp. ACB1]
gi|394704597|gb|EJF12135.1| putative GTP diphosphokinase [Oribacterium sp. ACB8]
Length = 755
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/355 (40%), Positives = 225/355 (63%), Gaps = 12/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ H+ Q R SG+PY++H + A++LA + + +AAGLLHD ++D ++
Sbjct: 42 MITKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILADLEMDKETIAAGLLHDVVEDTGMT 101
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ F VA LV+GV+KL+QL+ N+ ++A+ L MF++MA D R ++I
Sbjct: 102 LKDLEAEFNPDVASLVDGVTKLTQLNL-----NSDKVEMQAENLRKMFVSMAKDIRVIII 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL+ KR+ A+E+LEI+ PLA+RLGIS K+++++L K+L P+ +
Sbjct: 157 KLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLADRLGISKIKIEMDDLSLKYLEPEVY 216
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L+ K+ E + S +E++ + +++ I + GR K +SI+ KM+ + T+
Sbjct: 217 YDLADKVHFKREAREDRINSIVEEVREHIEESGIEANI-KGRIKHFFSIYKKMVNQNKTI 275
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IVE DCY L V+H+++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 DQIYDLFAIRIIVETVRDCYAVLGVIHKMYTPIPGRFKDYIAMPKPNMYQSLHTTVIGRD 335
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQM--VEWARWVLTWQ 548
VP E+QIRT EMH AEFG AAHW+YKE G + +M ++W +L WQ
Sbjct: 336 GVPFEIQIRTYEMHRTAEFGIAAHWKYKEQGGSNEKATETEMSKMKWLHEILEWQ 390
>gi|365974032|ref|YP_004955591.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
gi|422427939|ref|ZP_16504850.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|422433331|ref|ZP_16510199.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|422435890|ref|ZP_16512747.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|422443695|ref|ZP_16520493.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|422445869|ref|ZP_16522616.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|422454300|ref|ZP_16530980.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|422510504|ref|ZP_16586650.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|422539308|ref|ZP_16615181.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|422547962|ref|ZP_16623778.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|422562921|ref|ZP_16638598.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|422570085|ref|ZP_16645692.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|422578538|ref|ZP_16654062.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|313764313|gb|EFS35677.1| GTP diphosphokinase [Propionibacterium acnes HL013PA1]
gi|313815851|gb|EFS53565.1| GTP diphosphokinase [Propionibacterium acnes HL059PA1]
gi|314915303|gb|EFS79134.1| GTP diphosphokinase [Propionibacterium acnes HL005PA4]
gi|314920223|gb|EFS84054.1| GTP diphosphokinase [Propionibacterium acnes HL050PA3]
gi|314931746|gb|EFS95577.1| GTP diphosphokinase [Propionibacterium acnes HL067PA1]
gi|314955647|gb|EFT00049.1| GTP diphosphokinase [Propionibacterium acnes HL027PA1]
gi|314958043|gb|EFT02146.1| GTP diphosphokinase [Propionibacterium acnes HL002PA1]
gi|315098675|gb|EFT70651.1| GTP diphosphokinase [Propionibacterium acnes HL059PA2]
gi|315101322|gb|EFT73298.1| GTP diphosphokinase [Propionibacterium acnes HL046PA1]
gi|327450641|gb|EGE97295.1| GTP diphosphokinase [Propionibacterium acnes HL087PA3]
gi|327454021|gb|EGF00676.1| GTP diphosphokinase [Propionibacterium acnes HL083PA2]
gi|328754059|gb|EGF67675.1| GTP diphosphokinase [Propionibacterium acnes HL087PA1]
gi|365744031|gb|AEW79228.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn33]
Length = 774
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|86606590|ref|YP_475353.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
gi|86555132|gb|ABD00090.1| RelA/SpoT family protein [Synechococcus sp. JA-3-3Ab]
Length = 760
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/355 (44%), Positives = 218/355 (61%), Gaps = 13/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A H+GQ R SGDPY+ H V A LL +G ++ VAAGLLHD ++D +
Sbjct: 50 DLLRRAFEFAYCLHKGQKRKSGDPYIAHPVAVASLLRELGGDAVTVAAGLLHDVVEDTEV 109
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + + FG V LVEGV+KLSQ N +SKT +A+ MF+AMA D R +
Sbjct: 110 TLEALEAEFGPEVRLLVEGVTKLSQF-------NFSSKTEQQAENFRRMFVAMAKDIRVI 162
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL LP K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ +
Sbjct: 163 VVKLADRLHNMRTLQYLPPHKQKQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYE 222
Query: 377 QHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ ++ +LV EA + + IE+L + L + + GR K LY I+ KM +++
Sbjct: 223 AYRQIQ-ELVNAKRSEREAEIQAFIEELRKHLIQGGLEHFEISGRPKHLYGIYRKMQQQR 281
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
EI+D+ +R+IV+ +CY+ L VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 282 KEFHEIYDLLAVRVIVQTVSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAVI 341
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
G P+EVQIRT+EMH AE+G AAHW+YKE + W R +L WQ
Sbjct: 342 GLQGRPVEVQIRTEEMHRVAEYGIAAHWKYKEAGSTPVKPEEERFTWLRQLLEWQ 396
>gi|299822818|ref|ZP_07054704.1| GTP diphosphokinase [Listeria grayi DSM 20601]
gi|299816347|gb|EFI83585.1| GTP diphosphokinase [Listeria grayi DSM 20601]
Length = 740
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH+ Q R SG+PY++H ++ A +LA + + + VA+G LHD ++D ++
Sbjct: 29 IVEKAYTFARDAHKEQFRKSGEPYIIHPIQVAGILAELRMDPSTVASGFLHDVVEDTPVT 88
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 89 LDDLKAEFGEEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 143 KLADRLHNMRTLKHLPTQKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 202
Query: 379 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + DE + I+ + L++ NI + GR K +YSI+ KM ++
Sbjct: 203 YRIVHLMRQKRDERERYLQDVIDGVNDNLEELNIQADI-TGRPKHIYSIYRKMSIQQKQF 261
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 262 NEIYDLLAVRIIVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 321
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + +SF +M W R +L +Q EA
Sbjct: 322 GEPLEVQIRTTEMHQIAEYGVAAHWAYKEGKVVNAKTSFDNKMT-WFREILEYQNEA 377
>gi|365962856|ref|YP_004944422.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965098|ref|YP_004946663.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
gi|422451696|ref|ZP_16528397.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|422501466|ref|ZP_16577720.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|422543035|ref|ZP_16618885.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|313827636|gb|EFS65350.1| GTP diphosphokinase [Propionibacterium acnes HL063PA2]
gi|314967479|gb|EFT11578.1| GTP diphosphokinase [Propionibacterium acnes HL037PA1]
gi|315108540|gb|EFT80516.1| GTP diphosphokinase [Propionibacterium acnes HL030PA2]
gi|365739537|gb|AEW83739.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn31]
gi|365741779|gb|AEW81473.1| GTP pyrophosphokinase [Propionibacterium acnes TypeIA2 P.acn17]
Length = 774
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|347753065|ref|YP_004860630.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 36D1]
gi|347585583|gb|AEP01850.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 36D1]
Length = 729
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 218/346 (63%), Gaps = 13/346 (3%)
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
A +AH GQ R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F
Sbjct: 35 ASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEF 94
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHN 326
VA LV+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHN
Sbjct: 95 NDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHN 148
Query: 327 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--K 384
M TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K
Sbjct: 149 MRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMK 208
Query: 385 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 444
E + + IE++++ L D +I + GR K +YSI+ KM+++ +EI+D+
Sbjct: 209 RKRAEREQYLQNVIEEVKERLADIHIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLA 267
Query: 445 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQI 504
+R+IV++ +DCY L V+H W +PG+ KDYI PK N YQSLHT V G PLEVQI
Sbjct: 268 VRIIVKSIKDCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQI 327
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 548
RT EMH AE+G AAHW YKEG + +SF ++ W R +L +Q
Sbjct: 328 RTFEMHRIAEYGVAAHWAYKEGKTVNEKTSFEKKL-SWFREILEFQ 372
>gi|50842646|ref|YP_055873.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289425156|ref|ZP_06426933.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|335055041|ref|ZP_08547835.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|342211740|ref|ZP_08704465.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
gi|387503540|ref|YP_005944769.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|422438217|ref|ZP_16515061.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|422457221|ref|ZP_16533883.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|422493438|ref|ZP_16569738.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|422495646|ref|ZP_16571933.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|422524246|ref|ZP_16600255.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|422532216|ref|ZP_16608162.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|50840248|gb|AAT82915.1| GTP pyrophosphokinase [Propionibacterium acnes KPA171202]
gi|289154134|gb|EFD02822.1| GTP diphosphokinase [Propionibacterium acnes SK187]
gi|313792000|gb|EFS40101.1| GTP diphosphokinase [Propionibacterium acnes HL110PA1]
gi|313812804|gb|EFS50518.1| GTP diphosphokinase [Propionibacterium acnes HL025PA1]
gi|313838871|gb|EFS76585.1| GTP diphosphokinase [Propionibacterium acnes HL086PA1]
gi|315077872|gb|EFT49923.1| GTP diphosphokinase [Propionibacterium acnes HL053PA2]
gi|315105673|gb|EFT77649.1| GTP diphosphokinase [Propionibacterium acnes HL030PA1]
gi|327453281|gb|EGE99935.1| GTP diphosphokinase [Propionibacterium acnes HL092PA1]
gi|333763083|gb|EGL40553.1| GTP diphosphokinase [Propionibacterium sp. 434-HC2]
gi|335277585|gb|AEH29490.1| GTP pyrophosphokinase [Propionibacterium acnes 6609]
gi|340767284|gb|EGR89809.1| GTP diphosphokinase [Propionibacterium sp. CC003-HC2]
Length = 774
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|431794423|ref|YP_007221328.1| RelA/SpoT family (p)ppGpp synthetase [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784649|gb|AGA69932.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 729
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 214/353 (60%), Gaps = 11/353 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ AE AHRGQ+R SG+ Y+ H +E A +L + + +AA LHD ++D S
Sbjct: 20 LVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTKYS 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG+ VA LV+GV+KL ++ ++E ++ + L MFLAMA D R +LI
Sbjct: 80 VEDIEKEFGSQVALLVDGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL K++ A+ET+EIF PLANRLGI K +LE+L F++L P ++
Sbjct: 134 KLADRLHNMRTLKFHSEKKQKEIAQETIEIFAPLANRLGIFRIKWELEDLSFRYLKPQEY 193
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS L E + I +L L + I + GR K YSI+ KM+ + +
Sbjct: 194 YDLSEGIALKRAEREVQINEVITQLRSRLSEVGIRADI-SGRPKHFYSIYRKMINQHKEL 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV++ DCY AL ++H LW +PG+ KDYI PK N YQSLHT + G
Sbjct: 253 SEIYDLTAVRVIVDSVNDCYGALGIIHTLWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAH 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL-QMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKEG + + Q + W R +L WQ
Sbjct: 313 GEPFEIQIRTWEMHRTAEYGIAAHWKYKEGAGRPAGGNFEQKLSWLRQLLEWQ 365
>gi|422516400|ref|ZP_16592509.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|422545278|ref|ZP_16621108.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
gi|313802050|gb|EFS43284.1| GTP diphosphokinase [Propionibacterium acnes HL110PA2]
gi|314962656|gb|EFT06756.1| GTP diphosphokinase [Propionibacterium acnes HL082PA1]
Length = 774
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|197119579|ref|YP_002140006.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Geobacter
bemidjiensis Bem]
gi|197088939|gb|ACH40210.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter bemidjiensis Bem]
Length = 716
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 219/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLLRKAYVFCAKVHQGQTRLSGEPYLIHPMEVAGILADLRLDLPAVVTGLLHDTVEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + FGA VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 THEELESLFGAEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMATDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRTIAKETLDIYAPIANRLGISWVKGELEDLSFRYLEPQL 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+ K+ + E + V + E +++ L++ I V GR K LYSI+ KM + +
Sbjct: 195 YYDLAGKVAKKKQERESYVATVKEIIKKQLEEHGIKGDV-SGRSKHLYSIYRKMQSRNVD 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ +R+ VE+ +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 IDEIYDLIAIRVSVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 YGERMEVQIRTVEMHRVAESGIAAHWKYKEGKGYDDKDVKRFT-WIRQLLEWQQE 367
>gi|386074939|ref|YP_005989257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
gi|353458729|gb|AER03274.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
interrogans serovar Lai str. IPAV]
Length = 674
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 253/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW PG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPAPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPEGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|419421340|ref|ZP_13961568.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
gi|422396586|ref|ZP_16476617.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|327330397|gb|EGE72146.1| GTP diphosphokinase [Propionibacterium acnes HL097PA1]
gi|379977831|gb|EIA11156.1| GTP pyrophosphokinase [Propionibacterium acnes PRP-38]
Length = 774
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|383781444|ref|YP_005466011.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
gi|381374677|dbj|BAL91495.1| putative ppGpp synthetase [Actinoplanes missouriensis 431]
Length = 830
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 215/359 (59%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 128 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 187
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 188 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 239
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 240 DRLHNMRTLTFLPRAKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 299
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ ++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 300 NRLIGEHQPQREALLRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 358
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 359 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 418
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 419 VEMQIRTFAMHRTAEFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 473
>gi|295692846|ref|YP_003601456.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
gi|295030952|emb|CBL50431.1| GTP pyrophosphokinase [Lactobacillus crispatus ST1]
Length = 746
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHKVAEYGVAAHWAYKRGN 350
>gi|401564457|ref|ZP_10805350.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
gi|400188859|gb|EJO22995.1| GTP diphosphokinase [Selenomonas sp. FOBRC6]
Length = 743
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 219/357 (61%), Gaps = 13/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D
Sbjct: 28 DKIRKAYAYAEQAHSGQVRISGDAYIIHPLNVAYILTGLHLDDETICAALLHDVVEDTCA 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++
Sbjct: 88 TLEEMEAEFGKNIMALIDGVTKLGRIEYMSKED------VQLENYRKMFLAMAKDIRVIM 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEA 201
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L ++ E + +IE++ + L+ I + GR K YSI+ KM + +
Sbjct: 202 YYTLVEEVKHKRKERQEFIRESIEQIREKLEAAGIKAEI-KGRAKHFYSIYRKMKRDNKS 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V
Sbjct: 261 VNEIYDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTH 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 550
G PLE+QIRTK MH +EFG AAHW+YKE + Q + W R +++ Q E
Sbjct: 321 GY-PLEIQIRTKAMHQVSEFGVAAHWKYKEAGRSIGATDETDQKMSWLRQMVSLQKE 376
>gi|335051392|ref|ZP_08544312.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
gi|333766726|gb|EGL44010.1| GTP diphosphokinase [Propionibacterium sp. 409-HC1]
Length = 774
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|225568638|ref|ZP_03777663.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
gi|225162566|gb|EEG75185.1| hypothetical protein CLOHYLEM_04716 [Clostridium hylemonae DSM
15053]
Length = 793
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 229/360 (63%), Gaps = 13/360 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A +AH Q R SG+PY++H + A++LA + + +AAG+LHD ++D +S +
Sbjct: 81 KAYETARKAHGDQCRKSGEPYIVHPLWVAIILANLEMDKETIAAGMLHDVVEDTSVSEEE 140
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 141 IKKNFGEEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 195
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 196 DRLHNMRTLQFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDL 255
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ + E V ++++ +K+ NI V GR K +SI+ KM+ ++ T+D+I
Sbjct: 256 VNQINSRKTEREEFVQQIVDEVSTHMKNANIKADV-NGRVKHFFSIYKKMVNQEKTVDQI 314
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P
Sbjct: 315 YDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP 374
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 556
E+QIRT+EMH AE+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 375 FEIQIRTEEMHKTAEYGIAAHWKYKESNDGKKSVQAQEEEKLSWLRQILEWQRD-MSDNR 433
>gi|441523303|ref|ZP_21004929.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sihwensis NBRC 108236]
gi|441457074|dbj|GAC62890.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sihwensis NBRC 108236]
Length = 764
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE AH GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 61 QAYAVAEEAHSGQFRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTSYSLEK 120
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 121 LEADFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 172
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 173 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEI 232
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + L AL I+ V GR K +SI+ KM+ K D+I
Sbjct: 233 VRLVADRAPSRDTYLARVRSDLNTALGASRITATV-EGRPKHYWSIYQKMIVKGKDFDDI 291
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G P
Sbjct: 292 HDLVGMRILCDEVRDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKP 351
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 352 LEVQIRTFEMHRTAEFGIAAHWRYKEGRKGKGRKATDIAEVDDMAWMRQLLDWQREA 408
>gi|443290378|ref|ZP_21029472.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
gi|385886705|emb|CCH17546.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Micromonospora
lupini str. Lupac 08]
Length = 842
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 157/359 (43%), Positives = 216/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A R H GQ R SGDPY+ H + A +L +G ++T + A LLHDT++D + D
Sbjct: 140 RAFDTAARWHSGQYRKSGDPYITHPLAVATILGNLGMDTTTLVAALLHDTIEDTEYTLDA 199
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 200 MRADFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 251
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 252 DRLHNMRTLTFLPRPKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRYEEI 311
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E E+++ +K+ LK I GR K LYSI+ KM+ + ++I
Sbjct: 312 NRLIGEHQPQRESLLRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 370
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 371 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 430
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 431 VEMQIRTYAMHRTAEFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQREA 485
>gi|238063876|ref|ZP_04608585.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
gi|237885687|gb|EEP74515.1| relA/spoT family protein [Micromonospora sp. ATCC 39149]
Length = 828
Score = 280 bits (715), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 158/362 (43%), Positives = 215/362 (59%), Gaps = 23/362 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ AF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 123 LIQTAFDTANRWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTEYT 182
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG V LV+GV+KL ++ KL +A+ + M +AMA D R ++I
Sbjct: 183 LDQMRADFGGEVTLLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVI 234
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP KR++ AKETLEI PLA+RLG++T K +LE+L F L P ++
Sbjct: 235 KLADRLHNMRTLSFLPAPKREQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRY 294
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E E+++ +K+ LK I GR K LYSI+ KM+ +
Sbjct: 295 EEILRLIGEHQPQRESLLRQVTQKVGTDLKAAKIKAET-TGRPKHLYSIYQKMIVRGRDF 353
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
++I+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 354 NDIYDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPT 413
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQC 549
P+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ
Sbjct: 414 GKPVEMQIRTYAMHRTAEFGIAAHWKYKEHKGTQIVGPPAH----IDEMTWLRQLLDWQR 469
Query: 550 EA 551
EA
Sbjct: 470 EA 471
>gi|229828401|ref|ZP_04454470.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
gi|229792995|gb|EEP29109.1| hypothetical protein GCWU000342_00462 [Shuttleworthia satelles DSM
14600]
Length = 790
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/385 (39%), Positives = 233/385 (60%), Gaps = 11/385 (2%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E +A H + KA+ A +AH+ Q R SG+PY++H + A++LA +
Sbjct: 38 EVIYRELVARINRYHPNTDISMIEKAYGIARQAHKDQKRKSGEPYIIHPLSVALILADLE 97
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + GLLHD ++D +S D + R F +A LV+GV+KL QLS + +
Sbjct: 98 LDKETIVGGLLHDVVEDTVMSLDDVRREFSDEIALLVDGVTKLGQLSY-----DADKVEI 152
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAM+ D R +LIKLADRLHNM TL + K++ A+ET+EI+ PLA RLG
Sbjct: 153 QAENLRKMFLAMSKDIRVLLIKLADRLHNMRTLKFMTPAKQKEKARETMEIYAPLAQRLG 212
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVL 415
IS KV+L++L K L PD + +L +L + E + S + + + + I +
Sbjct: 213 ISKVKVELDDLALKFLEPDAYYDLLEQLNQRESERSEYIQSLADLVTRQIDAAGIKAKIY 272
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K L+SI+ KM+ + T+D+I+D++ +R+IV++ +DCY +L ++H+ + +PG+ KD
Sbjct: 273 -GRAKHLFSIYKKMVNQHKTLDQIYDLFAVRIIVDDLKDCYASLGIIHEHYTPIPGRFKD 331
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFV 534
YI PK N YQSLHT V G P E+QIRT EMH +E+G AAHW+YKE G+ ++
Sbjct: 332 YIAMPKPNMYQSLHTTVIGPKGQPFEIQIRTWEMHRISEYGIAAHWKYKESGEGATTNQE 391
Query: 535 LQMVEWARWVLTWQCEAMSKDRSCV 559
Q + W R +L WQ + M+ ++ V
Sbjct: 392 EQKLSWLRQILEWQ-QDMTDNKEFV 415
>gi|336054243|ref|YP_004562530.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
gi|333957620|gb|AEG40428.1| PpGpp synthetase [Lactobacillus kefiranofaciens ZW3]
Length = 746
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A++AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFADKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRAIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|386851465|ref|YP_006269478.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
gi|359838969|gb|AEV87410.1| GTP pyrophosphokinase [Actinoplanes sp. SE50/110]
Length = 810
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/359 (44%), Positives = 215/359 (59%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A R H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D +
Sbjct: 108 KAFDVAARWHSGQYRKSGDPYITHPLAVATILANLGMDTTTLVAALLHDTIEDTDYGLEQ 167
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 168 MRNDFGAEVALLVDGVTKLDRV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 219
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ AKETLEI PLA+RLG++T K +LE+L F L P + E+
Sbjct: 220 DRLHNMRTLTFLPRAKQEQKAKETLEILAPLAHRLGMNTIKWELEDLAFGTLFPKRFEEI 279
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + E EA++ ++ LK I GR K LYSI+ KM+ + ++I
Sbjct: 280 NRLIGEHQPQREALLRQVTNRVSLDLKSAKIKAET-TGRPKHLYSIYQKMIVRGRDFNDI 338
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V+ DCY AL V+H W VPG+ KDYI PKFN YQSLHT V G P
Sbjct: 339 YDLVGVRILVDTVRDCYAALGVIHANWQPVPGRFKDYIAMPKFNMYQSLHTTVIGPTGKP 398
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AEFG AAHW+YKE G H + + W R +L WQ EA
Sbjct: 399 VEMQIRTFAMHRTAEFGIAAHWKYKEQKGATIVGPPAH----IDEMTWLRQLLDWQREA 453
>gi|300361857|ref|ZP_07058034.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
gi|300354476|gb|EFJ70347.1| GTP diphosphokinase [Lactobacillus gasseri JV-V03]
Length = 750
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 206/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYKFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|229918416|ref|YP_002887062.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sp. AT1b]
gi|229469845|gb|ACQ71617.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sp. AT1b]
Length = 729
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/351 (43%), Positives = 220/351 (62%), Gaps = 10/351 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A+ H GQ R SG+PY+LH V+ A +L IG ++T + LLHD ++D +S
Sbjct: 28 VKRAYEYAKLHHTGQFRRSGEPYILHPVQVAGILVDIGLDATTIIGALLHDVVEDTDISL 87
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA LV+GV+KL ++ +++ A + M +AMA D R +LIK
Sbjct: 88 QQLTDDFGPDVAMLVDGVTKLGKIKYKSKKEELA------ENHRKMIIAMAEDVRVILIK 141
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL +P K+ + A+ETLEIF PLA+R+GIST K +LE++ +++NP Q+
Sbjct: 142 LADRLHNMRTLQHMPKEKQVQKAEETLEIFAPLAHRMGISTIKWELEDISLRYINPQQYY 201
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
++ S + + EA+VTS I ++ L++ +I V GR K +YSI+ KM+K K +
Sbjct: 202 KIVSMMKQKRTEREALVTSVITEVNGVLEEVHIDADV-NGRPKHIYSIYNKMVKHKKEFN 260
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R+IV++ DCY L ++H + +PG+ KDYI PK N YQSLHT V G
Sbjct: 261 EIYDLMAVRIIVDSIRDCYAVLGIIHTQYKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKG 320
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRTK+MH AEFG AAHW YKEG ++ + + R +L Q
Sbjct: 321 EPLEVQIRTKDMHFIAEFGIAAHWAYKEGKNVSTNGFDEKIAHLREILELQ 371
>gi|417931889|ref|ZP_12575254.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
gi|340775832|gb|EGR97885.1| GTP diphosphokinase [Propionibacterium acnes SK182B-JCVI]
Length = 773
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 213/356 (59%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 LIDRAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG VA LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEVALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|313679281|ref|YP_004057020.1| (p)ppGpp synthetase I SpoT/RelA [Oceanithermus profundus DSM 14977]
gi|313151996|gb|ADR35847.1| (p)ppGpp synthetase I, SpoT/RelA [Oceanithermus profundus DSM
14977]
Length = 734
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 229/363 (63%), Gaps = 27/363 (7%)
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-FLSYDYIFRT 266
A RAH GQ R SG+PY+ H V +LA + + + AGLLHDT++D +S++ I +
Sbjct: 37 AYRAHEGQFRRSGEPYITHPVAVTEILAELQMDPDSLIAGLLHDTVEDVESVSFETIRQR 96
Query: 267 FGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLH 325
FG VA +VEG +K+S+LSK+A T+ + +A+ L MF+AM D R +++KLADR H
Sbjct: 97 FGEDVARIVEGETKVSKLSKMA----TSVEDQQAENLRQMFIAMTRDLRIIIVKLADRTH 152
Query: 326 NMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL 385
NM TL+ +P K++R +KETLEIF P+A+RLGI K++LE+L F++L+P+++ L +L
Sbjct: 153 NMRTLEFMPPEKQRRISKETLEIFAPMAHRLGIGQIKLELEDLAFRYLHPEEYAALVERL 212
Query: 386 VECFD--EAMVTSAIEKLEQALKDK-----NISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+V +A LE AL++ ++ + GR K L+SI KM +++ T+++
Sbjct: 213 AHHSQAHREVVDNAKGALEHALENDYVLGLSVDGFSVSGRTKHLFSIWKKMQREEKTLEQ 272
Query: 439 IHDIYGLRLIVE-------------NEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 485
I+D+ LR+I++ ++ CY L +VH LW +PG++KDYI +PK NGY
Sbjct: 273 IYDLLALRVILDPKPVASPEEAASREKQVCYHVLGLVHALWPPIPGRVKDYIAQPKPNGY 332
Query: 486 QSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 545
QSLHT V G +PLEVQIRT+EMH AE+G AAHW YKEG + + + V+W +
Sbjct: 333 QSLHTTVITPGGLPLEVQIRTREMHRVAEYGVAAHWLYKEG-LTDPNQLKRRVKWIELLQ 391
Query: 546 TWQ 548
WQ
Sbjct: 392 EWQ 394
>gi|418721778|ref|ZP_13280952.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|421095922|ref|ZP_15556630.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410361337|gb|EKP12382.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200801926]
gi|410741822|gb|EKQ90575.1| putative GTP diphosphokinase [Leptospira borgpetersenii str. UI
09149]
gi|456889585|gb|EMG00473.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200701203]
Length = 674
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|227484948|ref|ZP_03915264.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
gi|227237103|gb|EEI87118.1| GTP diphosphokinase [Anaerococcus lactolyticus ATCC 51172]
Length = 726
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 218/353 (61%), Gaps = 16/353 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ H GQ R SG+ Y +H + A L+ + + + AGL+HD L+D +
Sbjct: 26 DLIKKAYDFGVLHHNGQKRNSGEDYFIHPIAVASNLSDMKLDDETICAGLMHDVLEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG + LV+GV+KL + N T+ + +A+ + M +AMA D R VL
Sbjct: 86 TRDEMKAEFGEEITFLVDGVTKLKNI------NYTSKEEKQAENIRKMVMAMANDVRVVL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ + K+ + A ET+EI+VPLA+RLGI + K +LE+LCF++ P++
Sbjct: 140 IKLADRLHNMRTLEYMTREKQLQKANETIEIYVPLAHRLGIYSLKWELEDLCFRYQEPEK 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL+ + E + I+ L +AL NI+F + GR KSLYSI+ KM + K+
Sbjct: 200 YYELAEMVNVKRRERENYINEIIDTLTKALDSTNINFEI-SGRPKSLYSINKKMERNKIA 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V+ +CY L VH LW +P ++KDYI +PK NGY+SLHT V G+
Sbjct: 259 FEEIYDLTAIRVLVDTIAECYAVLGKVHSLWRPIPNRIKDYIGQPKPNGYRSLHTTVFGD 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS------SFVLQMVEWAR 542
P EVQIRT++MH + EFG AAHWRYKE S SF+ Q+VEW +
Sbjct: 319 DSKPFEVQIRTRKMHRECEFGVAAHWRYKENKKTTSDFDDAMSFLRQIVEWQQ 371
>gi|89895197|ref|YP_518684.1| hypothetical protein DSY2451 [Desulfitobacterium hafniense Y51]
gi|219669627|ref|YP_002460062.1| (p)ppGpp synthetase I SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|423073423|ref|ZP_17062162.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
gi|89334645|dbj|BAE84240.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539887|gb|ACL21626.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfitobacterium hafniense
DCB-2]
gi|361855729|gb|EHL07687.1| GTP diphosphokinase [Desulfitobacterium hafniense DP7]
Length = 726
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 213/353 (60%), Gaps = 11/353 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ AE AHRGQ+R SG+ Y+ H +E A +L + + +AA LHD ++D +
Sbjct: 20 LVEKAYSFAEEAHRGQLRNSGEEYIQHPLEVAKILLELEMDEATIAAAFLHDVVEDTHYT 79
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I R FG+ VA LV+GV+KL ++ ++E ++ + L MFLAMA D R +LI
Sbjct: 80 NEDIEREFGSQVAILVDGVTKLGRIEYKSKEE------LQVENLRKMFLAMAKDIRVILI 133
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL K++ A ETLEIF PLANRLGI K +LE+L F++L P ++
Sbjct: 134 KLADRLHNMRTLKFHSEKKQKEIALETLEIFAPLANRLGIFRIKWELEDLSFRYLKPQEY 193
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+LS L E + I +L + L + I + GR K YSI+ KM+ + +
Sbjct: 194 YDLSEGIALKRAEREVQINEVISQLSKRLAEVGIKADI-SGRPKHFYSIYRKMINQHREL 252
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI PK N YQSLHT + G
Sbjct: 253 SEIYDLTAVRVIVDSVNDCYGALGIIHTMWKPLPGRFKDYIAMPKPNMYQSLHTTLVGAH 312
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH-SSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKEG + Q + W R +L WQ
Sbjct: 313 GEPFEIQIRTWEMHRTAEYGIAAHWKYKEGAGKPVGGNFEQKLSWLRQMLEWQ 365
>gi|17229041|ref|NP_485589.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
gi|17135369|dbj|BAB77915.1| (p)ppGpp 3-pyrophosphohydrolase [Nostoc sp. PCC 7120]
Length = 751
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 214/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H GQ R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 43 LICRAFDFAYQLHHGQYRKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG V LVEGV+KLS++ N T+ K +A+ MFLAMA D R +++
Sbjct: 103 IEEIEERFGPEVKQLVEGVTKLSKI------NFTSKKESQAENFRRMFLAMAQDIRVIVV 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 157 KLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEAF 216
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ + E D E + A L L+ + L + GR K LYSI+ KM +++
Sbjct: 217 RQMQKYVSEKRDAREEKLAKATAILRDRLQQAGVRCLDISGRPKHLYSIYQKMHRQQKEF 276
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 NEIYDLAALRIIVETNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLT 336
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE +S + W R +L WQ +
Sbjct: 337 GRPLEVQIRTMEMHRIAEYGIAAHWKYKETGGSNSLITTSDEKFTWLRQLLEWQSD 392
>gi|58337233|ref|YP_193818.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
gi|58254550|gb|AAV42787.1| ppGpp synthetase [Lactobacillus acidophilus NCFM]
Length = 746
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 211/335 (62%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ E N+ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E ++ I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|238922253|ref|YP_002935767.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
gi|238873925|gb|ACR73633.1| GTP pyrophosphokinase [Eubacterium eligens ATCC 27750]
Length = 770
Score = 279 bits (714), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 221/357 (61%), Gaps = 19/357 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A +AH GQ R SG+PY++H + A++LA + + + AGLLHD ++D ++ +
Sbjct: 60 KAYETARKAHEGQFRKSGEPYIIHPLCVAIILAELELDKESIIAGLLHDVVEDTVMTSED 119
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKL 320
+ + FG VA LV+GV+KL+QL N K V+A+ L MFLAMA D R +LIKL
Sbjct: 120 VAKEFGDEVALLVDGVTKLTQL------NYQHDKIEVQAENLRKMFLAMAKDIRVILIKL 173
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM T+ K+ ++ET+EI+ P+A+RLGIS KV+L++L K+L PD + +
Sbjct: 174 ADRLHNMRTMQYQSPAKQIEKSRETMEIYAPIAHRLGISKIKVELDDLSMKYLMPDVYND 233
Query: 381 LSSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L + L EA + S I+++ + + I + GR K +SI+ KM+ + T+D+
Sbjct: 234 LVEQVNLNRPGREAFIKSIIKEVGMHISNAGIEAEI-DGRVKHFFSIYRKMVNQNKTLDQ 292
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+DI+ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT +
Sbjct: 293 IYDIFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKPNNYQSLHTTLIASNGQ 352
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEG-----DCQHSSFVLQMVEWARWVLTWQCE 550
P E+QIRT EMH AE+G AAHW+YKEG D Q L W R +L WQ E
Sbjct: 353 PFEIQIRTYEMHKIAEYGIAAHWKYKEGKTGEKDNQSEEAKLS---WLRQILEWQKE 406
>gi|229086970|ref|ZP_04219127.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
gi|228696346|gb|EEL49174.1| GTP pyrophosphokinase [Bacillus cereus Rock3-44]
Length = 728
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/361 (42%), Positives = 218/361 (60%), Gaps = 21/361 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH Q R SG+PY++H ++ A +L + + + V+AG LHD ++D +
Sbjct: 26 ELVARAYEYARDAHSEQYRKSGEPYIIHPIQVAGILVDLHMDPSTVSAGFLHDVVEDTEV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F +A LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIEREFNKEIAMLVDGVTKLGKIKYKSHEQQ------QAENHRKMFIAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL LP K++R A ETLEIF PLA+RLGI+T K +LE+ ++LNP Q
Sbjct: 140 IKLSDRLHNMRTLKHLPQEKQRRIANETLEIFAPLAHRLGINTIKWELEDTSLRYLNPQQ 199
Query: 378 HTEL-------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ + ++ E DE M T +KL++ IS GR K +YSI+ KM
Sbjct: 200 YYRIVNLMKRKRAEREEYLDEVM-TGIRDKLKEVAIQPEIS-----GRPKHIYSIYRKMA 253
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT
Sbjct: 254 LQNKQFNEIYDLLAVRVVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANLYQSLHT 313
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQC 549
V G PLEVQIRTKEMH AE+G AAHW YKEG ++ L+ + W R +L WQ
Sbjct: 314 TVIGPKGDPLEVQIRTKEMHEIAEYGIAAHWAYKEGKAAEATGTLEKKLTWFRQILEWQN 373
Query: 550 E 550
E
Sbjct: 374 E 374
>gi|398333292|ref|ZP_10517997.1| GTP pyrophosphokinase [Leptospira alexanderi serovar Manhao 3 str.
L 60]
Length = 674
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSASEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|298529911|ref|ZP_07017313.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509285|gb|EFI33189.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfonatronospira thiodismutans
ASO3-1]
Length = 720
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 223/355 (62%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ+R SG+PYL H +E + +LA + ++ +AAGLLHDT++D S
Sbjct: 22 LIQKAYVFSASAHAGQIRLSGEPYLSHPLEVSDMLADLHLDADTIAAGLLHDTVEDTKAS 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLI 318
+ + FG VA +V+GV+K+ ++S ++E +A+ + M LAMAD R +L+
Sbjct: 82 LEEVRDQFGEEVARIVKGVTKIGKMSFDSKEE------AQAENIRKMILAMADDIRVILV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ K++ A+ET++I+ PLANRLG+ K+QLE+L +++ PD +
Sbjct: 136 KLADRLHNMKTLEHQSSFKQKAVAQETMDIYAPLANRLGLYRLKIQLEDLSLRYMKPDVY 195
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ + + E + + +E+ L+ +I V GR K +YSI+ KM+++ L++
Sbjct: 196 FQIQEGVNKQKVVGEQYIQKVCQNIEEILEQNSIEGRV-SGRMKHIYSIYHKMVQQGLSL 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D++ DI R++V++ +DCY L +VH +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 255 DQVFDIIAFRVLVQSIKDCYAVLGLVHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGPD 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 550
+E+QIRT+EMH AEFG A+HWRYKE G + + W R +L WQ E
Sbjct: 315 GERIEIQIRTEEMHKMAEFGVASHWRYKEDGKNRFKDKDAERFSWLRQILDWQEE 369
>gi|336114504|ref|YP_004569271.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus coagulans 2-6]
gi|335367934|gb|AEH53885.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus coagulans 2-6]
Length = 723
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 153/346 (44%), Positives = 217/346 (62%), Gaps = 13/346 (3%)
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
A +AH GQ R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++ D + F
Sbjct: 29 ASKAHEGQKRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTDVTLDELREEF 88
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHN 326
VA LV+GV+KL ++ + E +A+ MF+AMA D R +LIKLADRLHN
Sbjct: 89 NDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVILIKLADRLHN 142
Query: 327 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--K 384
M TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+ + + K
Sbjct: 143 MRTLKHLPPEKQRRIANETLEIFAPLAHRLGISAIKWELEDTSLRYLNPQQYYRIVNLMK 202
Query: 385 LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYG 444
E + + IE++++ L D I + GR K +YSI+ KM+++ +EI+D+
Sbjct: 203 RKRAEREQYLQNVIEEVKERLADIRIKSEI-SGRPKHIYSIYRKMVQQHKQFNEIYDLLA 261
Query: 445 LRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQI 504
+R+IV++ +DCY L V+H W +PG+ KDYI PK N YQSLHT V G PLEVQI
Sbjct: 262 VRIIVKSIKDCYAVLGVIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKGEPLEVQI 321
Query: 505 RTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 548
RT EMH AE+G AAHW YKEG + +SF ++ W R +L +Q
Sbjct: 322 RTFEMHRIAEYGVAAHWAYKEGKTVNEKTSFEKKL-SWFREILEFQ 366
>gi|116328856|ref|YP_798576.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330538|ref|YP_800256.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|116121600|gb|ABJ79643.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116124227|gb|ABJ75498.1| GTP pyrophosphokinase [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 674
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|403515171|ref|YP_006655991.1| PpGpp synthetase [Lactobacillus helveticus R0052]
gi|403080609|gb|AFR22187.1| PpGpp synthetase [Lactobacillus helveticus R0052]
Length = 746
Score = 279 bits (714), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|410938453|ref|ZP_11370300.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
gi|410786378|gb|EKR75322.1| putative GTP diphosphokinase [Leptospira noguchii str. 2006001870]
Length = 680
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 253/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +E AH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 35 VQKAYDVSEHAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 94
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 95 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 148
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 149 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 208
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 209 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 263
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 264 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 323
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 324 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 377
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 378 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 417
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 418 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 463
>gi|116629512|ref|YP_814684.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282852110|ref|ZP_06261468.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311110845|ref|ZP_07712242.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|420147336|ref|ZP_14654612.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
gi|116095094|gb|ABJ60246.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus gasseri ATCC 33323]
gi|282556870|gb|EFB62474.1| GTP diphosphokinase [Lactobacillus gasseri 224-1]
gi|311065999|gb|EFQ46339.1| GTP diphosphokinase [Lactobacillus gasseri MV-22]
gi|398401337|gb|EJN54839.1| GTP diphosphokinase [Lactobacillus gasseri CECT 5714]
Length = 750
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 206/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|116513948|ref|YP_812854.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|116093263|gb|ABJ58416.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 754
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/338 (45%), Positives = 205/338 (60%), Gaps = 19/338 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A RAH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVESAYQFAARAHEGQTRASGQPYIVHPTQVAGTLANLGLDPDTVAAGFLHDTVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FGA VA +V+GV+KL++ + K A+ M +AMA D R +L+
Sbjct: 87 NDDIKEKFGADVAFIVDGVTKLNKYEY------KSHKEFLAENHRKMLIAMAKDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQR-FAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
KLADRLHNM TL+ L +QR A ETL+I+ PLA+RLGI T K +LE++ F ++NP
Sbjct: 141 KLADRLHNMHTLEHLLRPDKQRRIAAETLDIYAPLADRLGIGTIKWKLEDMSFHYMNP-- 198
Query: 378 HTELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
E K+V D E + AI+ L L I + + GR K +YSI+ KM+
Sbjct: 199 --EAYYKIVSMMDAKRSEREGYIKDAIDYLRGTLDSLGIKYDI-SGRPKHIYSIYKKMVN 255
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K +EI+D+ +R+IV +DCY L VH W +PG+ KDYI PK NGYQSLHT
Sbjct: 256 KHKNFNEIYDLLAVRVIVPTVKDCYAVLGAVHTKWKPMPGRFKDYIAMPKANGYQSLHTT 315
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
+ G G PLE+QIRT+EMH AE+G AAHW YK G+ Q
Sbjct: 316 IIGPGGKPLEIQIRTEEMHKVAEYGVAAHWAYKRGNFQ 353
>gi|357038708|ref|ZP_09100505.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359500|gb|EHG07262.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum gibsoniae DSM
7213]
Length = 725
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 213/349 (61%), Gaps = 11/349 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A AH GQ R SG+PY+ H V +L + + + AGLLHDT++D + +
Sbjct: 24 RAFAFANEAHAGQKRNSGEPYITHPVAITTILTDLEMDMDTLVAGLLHDTVEDTGTTLED 83
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG VA LV+GV+KLS+L ++E + + L MFLAMA D R VLIKLA
Sbjct: 84 IEKYFGREVAQLVDGVTKLSRLEYRSKEER------QVENLRKMFLAMARDIRVVLIKLA 137
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL K++ A ETLEIF PLA+RLGI K +LE+L + NP+++ EL
Sbjct: 138 DRLHNMRTLQYHLEHKQREIALETLEIFAPLAHRLGIYRLKWELEDLALRFSNPEKYYEL 197
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + E + S I L + + + I+ + GR K+LYSI+ KM K++L ++I
Sbjct: 198 ADLVARTREKREEYIRSIISVLHKKMMEVKINAEI-QGRPKNLYSIYMKMQKQQLEFNQI 256
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R++V++ DCY L VH LW +PG+ KDYI PK N YQSLHT V P
Sbjct: 257 YDVMAVRVLVDSVRDCYAVLGTVHTLWVPIPGRFKDYIAMPKSNMYQSLHTTVVSPQGDP 316
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
LE+QIRT EMH +E+G AAHWRYKEG + F ++ W R +L WQ
Sbjct: 317 LEIQIRTWEMHRTSEYGIAAHWRYKEGGGKDGDFDRKL-SWLRQILDWQ 364
>gi|418735206|ref|ZP_13291618.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410749462|gb|EKR02354.1| putative GTP diphosphokinase [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 674
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQKRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSLSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|395244306|ref|ZP_10421275.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
gi|394483401|emb|CCI82283.1| GTP diphosphokinase [Lactobacillus hominis CRBIP 24.179]
Length = 748
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 154/335 (45%), Positives = 207/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A +AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFARKAHEGQFRVSGQPYIIHPTQVAGTLATLKLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DARA 315
+ I FG VA +V+GV+KLS++ SKT E AD M +AMA D R
Sbjct: 87 NEDIKEKFGKDVAFIVDGVTKLSKIQ-------YKSKTHEEYLADNHRKMLIAMAKDLRV 139
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP
Sbjct: 140 IMVKLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNP 199
Query: 376 DQHTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+Q+ + SK E E + AI+ L Q L +I + + GR K +YSI+ KM+
Sbjct: 200 EQYYRIVNLMQSKRSER--EGYIADAIQILRQTLDSLHIDYEIY-GRPKHIYSIYKKMVN 256
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGYQSLHT
Sbjct: 257 KHKDFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKSNGYQSLHTT 316
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
+ G G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 317 IIGPGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|339441909|ref|YP_004707914.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
gi|338901310|dbj|BAK46812.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[Clostridium sp. SY8519]
Length = 779
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 152/380 (40%), Positives = 234/380 (61%), Gaps = 20/380 (5%)
Query: 183 KEFLANAQLKHKIFRE----------DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAM 232
K+F++ +L ++ R V KA++ A AH+GQ+R SG+ Y++H + A+
Sbjct: 27 KDFVSPEELHEELIRSIRRYHPSTDISLVEKAYHIAANAHKGQVRKSGEEYIIHPLCVAI 86
Query: 233 LLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN 292
+LA + + + AGLLHD +D ++ + + F VA LV+GV+KL+QLS +
Sbjct: 87 ILADLEMDKETIVAGLLHDVAEDTGMTLEELAEDFNDEVALLVDGVTKLNQLS-----YD 141
Query: 293 TASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 351
V+A+ L MFLAMA D R ++IKLADRLHNM TL + K++ A+ET+EI+ P
Sbjct: 142 ADKIEVQAENLRKMFLAMAKDIRVIIIKLADRLHNMRTLQFMKPEKQKEKARETMEIYAP 201
Query: 352 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKN 409
+A RLGIS+ KV+LE+L K+L P+ + +L K+ E A V + +++++ + +
Sbjct: 202 IAQRLGISSIKVELEDLSLKYLEPEAYYDLVEKIALRKKERDAYVDALVKQVKSTIAAAD 261
Query: 410 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 469
I V GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+ + V
Sbjct: 262 IEATVY-GRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVKDVKDCYAALGVIHEHYTPV 320
Query: 470 PGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
PG+ KDYI PK N YQSLHT + G P E+QIRT+EMH E+G AAHW+YKE +
Sbjct: 321 PGRFKDYIAMPKPNMYQSLHTTLMGPNGQPFEIQIRTEEMHRTCEYGIAAHWKYKEANNG 380
Query: 530 HS-SFVLQMVEWARWVLTWQ 548
S + + W R +L WQ
Sbjct: 381 GGISGEEEKLSWLRQILEWQ 400
>gi|238852662|ref|ZP_04643072.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
gi|238834808|gb|EEQ27035.1| GTP pyrophosphokinase [Lactobacillus gasseri 202-4]
Length = 750
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/332 (45%), Positives = 206/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A+ AH GQ R SG PY++H + A LA + + VAAG LHDT++D ++
Sbjct: 27 FVESAYEFAKNAHEGQFRVSGQPYIIHPTQVAGTLATLRLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KLS++ ++ + + AD M +AMA D R +++
Sbjct: 87 NDDIKEKFGKDVAFIVDGVTKLSKIQYKSK----SHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E + AI+ L+Q L I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSER--EGYIADAIKTLKQTLDSLGIEYEIY-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV++ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 DFSEIYDLLAVRVIVKSVRDCYAVLGAVHTKWKPMPGRFKDYIAVPKVNGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT+ MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEAMHQVAEYGVAAHWAYKEG 351
>gi|339445999|ref|YP_004712003.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
gi|338905751|dbj|BAK45602.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Eggerthella sp. YY7918]
Length = 791
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/351 (42%), Positives = 217/351 (61%), Gaps = 10/351 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A AH GQ R SG+P++ H VE A++LA + + + A LLHDT++D ++ +
Sbjct: 76 KAFRFASDAHAGQCRKSGEPFVAHPVEVAIILADLRMDVETLVASLLHDTVEDTSVTRED 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R F +A LVEGV+K++++ + + A+ + M +AM+ D R ++IKLA
Sbjct: 136 VEREFSPEIAQLVEGVTKITRIEVESLSDEQAAT------IRKMLVAMSKDIRVIVIKLA 189
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL AL +R ++ETLEI+ P+A+RLGI+ K +LE+L F +L P++ ++
Sbjct: 190 DRLHNMRTLGALREDRRIFKSRETLEIYAPIAHRLGINNIKWELEDLSFFYLEPNKFKQV 249
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S + E E + IE L ++ I ++ GR K LYSI+ KM KK EI
Sbjct: 250 SRMVTESRAEREGYLDQIIEILHGEMEKVGIQAQIM-GRPKHLYSIYQKMTKKGKGFSEI 308
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R+IV++ +DCY AL VH LW +PG+ KDYI PKFN YQSLHT V G P
Sbjct: 309 YDLIAVRIIVKSVKDCYSALGAVHTLWHPMPGRFKDYIAMPKFNMYQSLHTTVIGPAGRP 368
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
LEVQIRT++MH +E+G AAHWRYKE + + Q + W R ++ WQ E
Sbjct: 369 LEVQIRTEDMHRTSEYGVAAHWRYKEKGGKGGDELDQQLAWLRQMIDWQSE 419
>gi|421100332|ref|ZP_15560964.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
gi|410796642|gb|EKR98769.1| putative GTP diphosphokinase [Leptospira borgpetersenii str.
200901122]
Length = 674
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIIHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|406981761|gb|EKE03162.1| hypothetical protein ACD_20C00238G0002 [uncultured bacterium]
Length = 718
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/353 (42%), Positives = 223/353 (63%), Gaps = 13/353 (3%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
I++ Y+ A H+GQ R S +PY++H VE A +LA + A++ + A LLHD L+D
Sbjct: 27 IRSAYDFAASWHKGQYRISEEPYIVHPVEVANILANLQADTDTICAALLHDILEDTDTKP 86
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I FG V +LV GV+KLS+ S ++E +A+ MFLAMA D R + +K
Sbjct: 87 EQIKELFGEDVLNLVNGVTKLSKYSFNSKEER------QAENFRKMFLAMAEDVRVIFLK 140
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL+ + K++ A+ET+EIF PLANRLG+ + +LE+L ++LNP+++
Sbjct: 141 LADRLHNMRTLNYMAPHKQKEIAQETVEIFAPLANRLGMGKIRAELEDLSLRYLNPEKYF 200
Query: 380 ELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E++ + + E V + I+K+ +LK+ NI V+ GR K+ SI+ KM +++ +
Sbjct: 201 EIAQLVAQSKAERDLTVQAIIDKINSSLKNMNIE-AVITGRAKNYNSIYNKMTRQQKSYQ 259
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+++DI R++V+NE++CY+ L V+H + +PG+ KDYI PK N Y+SLHT V G
Sbjct: 260 DLYDITAARIVVDNEKECYEVLGVIHSAFKPIPGRFKDYIAMPKSNLYRSLHTSVIGPRG 319
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AEFG AAHWRYKE G + SS V W R ++ +Q
Sbjct: 320 KPLEVQIRTHEMHDVAEFGIAAHWRYKESGGSTRSSSDVDMKFSWLRKLIEFQ 372
>gi|154505866|ref|ZP_02042604.1| hypothetical protein RUMGNA_03408 [Ruminococcus gnavus ATCC 29149]
gi|336432177|ref|ZP_08612016.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153793884|gb|EDN76304.1| RelA/SpoT family protein [Ruminococcus gnavus ATCC 29149]
gi|336019336|gb|EGN49062.1| hypothetical protein HMPREF0991_01135 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 768
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/363 (40%), Positives = 231/363 (63%), Gaps = 13/363 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH+ Q+R SG+PY++H + ++LA + + + AG+LHDT++D ++
Sbjct: 53 LIEKAYKLSREAHKEQVRKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDTVEDTEMT 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R ++I
Sbjct: 113 VEDITREFGEEVALLVDGVTKLGQLS-----YSKDKLEVQAENLRKMFLAMAKDIRVIII 167
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ + K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ +
Sbjct: 168 KLADRLHNMRTLEFMVPAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVY 227
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L L E E V + ++ +++ +I V GR K +SI+ KM+ + T+
Sbjct: 228 FQLVKDLNERKTEREEFVQQIVAEVSHHMENAHIQAKVY-GRVKHFFSIYKKMVNQNKTL 286
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 287 DQVYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPA 346
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHS-SFVLQMVEWARWVLTWQCEAMS 553
P E+QIRT+EMH AE+G AAHW+YKE G +++ S + + W R +L WQ + MS
Sbjct: 347 GQPFEIQIRTEEMHKTAEYGIAAHWKYKESGGSAKNNKSREEEKLSWLRQILEWQRD-MS 405
Query: 554 KDR 556
+R
Sbjct: 406 DNR 408
>gi|33866854|ref|NP_898413.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
gi|33639455|emb|CAE08839.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Synechococcus sp. WH 8102]
Length = 776
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 170/364 (46%), Positives = 219/364 (60%), Gaps = 15/364 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF + H GQ RASGDP ++H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDFGFQLHEGQFRASGDPCIVHPVAVADLLRDIGASASVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ D I FG+ V +LVEGV+KL + NN +A+ L MFLAMA D R V
Sbjct: 126 VTPDQIELHFGSEVRELVEGVTKLGGIHF----NNRTE--AQAENLRRMFLAMASDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM TL AL KRQR A+ET EI+ PLANRLGI +K +LE+L FK L P+
Sbjct: 180 LVKLADRLHNMRTLGALKEEKRQRIARETKEIYAPLANRLGIGRFKWELEDLAFKLLEPE 239
Query: 377 Q----HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E++SK E + VT A+ L L + + GR K L+ I KM ++
Sbjct: 240 AFREIQQEVASKRSEREERLGVTVAL--LNDRLAQAGLEGCEVSGRPKHLFGIWSKMQRQ 297
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ EI+D+ LR+I + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V
Sbjct: 298 QKAFHEIYDVAALRIITPSVEACYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAV 357
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEA 551
G P+EVQIRT EMH AEFG AAHW+YKEG SS W R ++ WQ E
Sbjct: 358 IGRHR-PIEVQIRTIEMHRVAEFGIAAHWKYKEGGSPASSSSEAERFNWLRQLVDWQQEG 416
Query: 552 MSKD 555
+ D
Sbjct: 417 GNDD 420
>gi|392960862|ref|ZP_10326327.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|421054380|ref|ZP_15517348.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|421059720|ref|ZP_15522283.1| RelA/SpoT family protein [Pelosinus fermentans B3]
gi|421068769|ref|ZP_15530010.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|421071241|ref|ZP_15532361.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392439135|gb|EIW16869.1| RelA/SpoT family protein [Pelosinus fermentans A12]
gi|392440738|gb|EIW18398.1| RelA/SpoT family protein [Pelosinus fermentans B4]
gi|392447157|gb|EIW24411.1| (p)ppGpp synthetase I, SpoT/RelA [Pelosinus fermentans A11]
gi|392454759|gb|EIW31581.1| RelA/SpoT family protein [Pelosinus fermentans DSM 17108]
gi|392458415|gb|EIW34950.1| RelA/SpoT family protein [Pelosinus fermentans B3]
Length = 736
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/469 (37%), Positives = 254/469 (54%), Gaps = 45/469 (9%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V +A+ A AH+GQ RASG+ Y+ H + A +L+ + ++ ++A LLHD ++D S
Sbjct: 27 IVQQAYELAVDAHKGQTRASGEEYICHPLGVAKILSELQIDALTISASLLHDVVEDTAFS 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + + FG VA LV+GV+KLS++ ++E + + MFLAMA D R VLI
Sbjct: 87 LEELEKLFGKEVAMLVDGVTKLSRIEYKSKEEQ------QLENFRKMFLAMAKDIRVVLI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL +P K++R ++ET EIF PLA+RLGIS+ K +LE+L F++L P+++
Sbjct: 141 KLADRLHNMRTLKHMPEHKQRRISQETHEIFAPLAHRLGISSVKWELEDLAFRYLEPEKY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
EL K+ + E ++ AI+ L L D I + GR K YSI+ KMLK +
Sbjct: 201 YELVEKVKQKRREREQLINEAIKILSARLDDVEIKADI-QGRPKHFYSIYKKMLKGNKDL 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R++V+ +DCY AL VVH LW +P + KDYI PK N YQSLHT V
Sbjct: 260 SEIYDLSAVRILVDTVKDCYGALGVVHTLWKPLPLRFKDYIAMPKSNMYQSLHTTVISTE 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 556
PLE+QIRT +MH +E+G AAHWRYKEG + + + W R + WQ +
Sbjct: 320 GQPLEIQIRTMDMHRTSEYGIAAHWRYKEGSKGANKDFDEKLTWLRQLSEWQQD------ 373
Query: 557 SCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 616
++ P F FS VFV + D V + P ST +D
Sbjct: 374 --------LRDPHEFMETVKMDIFS--------DEVFVFTPKGD---VIDLPAGSTPIDF 414
Query: 617 LERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPA 665
R G + R+N K + KL GD+VE+ +
Sbjct: 415 AYRIHTGVGNRC---------VGARINGKMI-PLETKLTNGDIVEIVTS 453
>gi|258653541|ref|YP_003202697.1| (p)ppGpp synthetase I SpoT/RelA [Nakamurella multipartita DSM
44233]
gi|258556766|gb|ACV79708.1| (p)ppGpp synthetase I, SpoT/RelA [Nakamurella multipartita DSM
44233]
Length = 822
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 216/353 (61%), Gaps = 14/353 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AH GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 122 RAYEVAEQAHAGQFRRSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTEYTLEK 181
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ EA+ + M +AMA D R +++KLA
Sbjct: 182 VTADFGDEVAHLVDGVTKLDKVR--------FGDATEAETIRKMIIAMAEDPRVLVVKLA 233
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+ ++ E+
Sbjct: 234 DRLHNMRTMRFLPPDKQARKARETLEVLAPLAHRLGMATIKWELEDLAFSILHSKRYDEI 293
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + ++LE L I V+ GR K YSI+ KM + DEI
Sbjct: 294 VRLVADRAPSRDTYLAAVTQQLEAELTAAKIPGQVV-GRGKHYYSIYQKMKARGREFDEI 352
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ +R++V + +CY A+ VVH LWA +PG+ KDYI +P++ YQSLHT V G P
Sbjct: 353 HDLVAVRILVGSVRECYAAMGVVHALWAPMPGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 412
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCE 550
LEVQIRT +MH AE+G AAHWRYKE H +S + + W R +L WQ E
Sbjct: 413 LEVQIRTFDMHHTAEYGIAAHWRYKETRGTHAGASATVDEMAWMRQLLDWQRE 465
>gi|282857439|ref|ZP_06266672.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
gi|282584724|gb|EFB90059.1| GTP diphosphokinase [Pyramidobacter piscolens W5455]
Length = 816
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 161/356 (45%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A A +AH QMRASG+PY++H V +LA + + + AGLLHD L+D ++ D
Sbjct: 122 EALVFAAQAHGDQMRASGEPYVIHPVYVTSILADMRMDLPTLQAGLLHDVLEDTPVTADE 181
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA V LV+GV+KL +L E+ +A+ L MFL MA D R VLIKLA
Sbjct: 182 MKNRFGATVEMLVDGVTKLGKLPFKTFED------YQAENLRKMFLVMAKDIRVVLIKLA 235
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM +L AL K+QR AKETLEI+ PLA+RLGI K LE+L FK+ +P + ++
Sbjct: 236 DRTHNMRSLGALRRDKQQRIAKETLEIYAPLAHRLGIYQVKRTLEDLAFKYYDPTMYYDI 295
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E A+V A+E L + L+ I + GR K YSI KM +KKL+++++
Sbjct: 296 KRRVKKRLPEREAIVNQAMEVLGERLRSIGIEAHI-KGRAKHFYSIFEKMNRKKLSVEQL 354
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR+IV + CY L +VH LW +PG+ DYI PK N Y+SLHT V G P
Sbjct: 355 YDLLALRVIVNDVTTCYTVLGIVHTLWKPIPGQFDDYIANPKNNMYRSLHTTVMGPQGEP 414
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
LEVQIRT EMH AE+G AAHWRYKEG H + Q +EW R L E S++
Sbjct: 415 LEVQIRTWEMHWLAEYGVAAHWRYKEGQG-HIDELDQKLEWIRKTLENGPETNSQE 469
>gi|325262048|ref|ZP_08128786.1| GTP diphosphokinase [Clostridium sp. D5]
gi|324033502|gb|EGB94779.1| GTP diphosphokinase [Clostridium sp. D5]
Length = 767
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/359 (40%), Positives = 225/359 (62%), Gaps = 12/359 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+ Q R SG+PY++H + ++LA + + + AG+LHD ++D ++ +
Sbjct: 56 KAYTTAKNAHKDQARKSGEPYIIHPLWVGIILADLEMDKETIVAGMLHDAVEDTDMTLED 115
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R F VA LV+GV+KL QLS + V+A+ L MFLAMA D R ++IKLA
Sbjct: 116 VAREFSEEVALLVDGVTKLGQLS-----YSQDKLEVQAENLRKMFLAMAKDIRVIIIKLA 170
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL+ + K++ A+ET++I+ P+A+RLGIS K +L++L K+ P+ + L
Sbjct: 171 DRLHNMRTLEFMTPAKQKEKARETMDIYAPIAHRLGISKIKTELDDLSLKYSQPEVYNNL 230
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
L E E V + ++ +K+ +I V GR K +SI+ KM+ + T+D++
Sbjct: 231 VKDLNERKTEREEFVQQIVAEVSTHMKNSHIHAKVY-GRVKHFFSIYKKMVNQNKTLDQV 289
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 290 YDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPSGQP 349
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 556
E+QIRT+EMH AEFG AAHW+YKE S+ + + W R +L WQ + MS +R
Sbjct: 350 FEIQIRTEEMHKTAEFGIAAHWKYKESSAGKSAKAQEEEKLSWLRQILEWQRD-MSDNR 407
>gi|374709317|ref|ZP_09713751.1| (p)ppGpp synthetase I SpoT/RelA [Sporolactobacillus inulinus CASD]
Length = 724
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/355 (41%), Positives = 223/355 (62%), Gaps = 11/355 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A+ AH+GQ+R SG+PY++H +E A +L + + T + +G LHD ++D ++
Sbjct: 22 VKEAYRFADEAHKGQVRKSGEPYIIHPIEVAGILVQLNMDVTTIVSGFLHDVVEDTRVTL 81
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D I FG VA+LV+GV+KL ++E+ +A+ MF+AMA D R V++K
Sbjct: 82 DDIRVKFGDNVAELVDGVTKLRNFEYTSKEDQ------QAENHRKMFVAMARDLRCVIVK 135
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + K+ + A ETLEI+ PLANRLGIS K +LE++ ++L P Q+
Sbjct: 136 LADRLHNMRTLKYMRHEKQIQKANETLEIYAPLANRLGISAIKWELEDISLRYLKPQQYY 195
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
++ + + + +E A + +E L+ +K +I V GR K +YSI+ KM+ + +
Sbjct: 196 KIVNLMKQKREEREAYIAKVVEDLKAYVKSVHIPAEV-SGRPKHIYSIYRKMVNQHKQFN 254
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D++ +R+IV+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 EIYDLFAVRIIVKTIKDCYAILGIIHTHWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKG 314
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT+EMH AE+G AAHW YKEG ++ + + + W R +L +Q E
Sbjct: 315 DPLEVQIRTEEMHDVAEYGIAAHWAYKEGKVKNINNKFEDRLTWFREILEYQNET 369
>gi|292670701|ref|ZP_06604127.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
gi|292647647|gb|EFF65619.1| GTP diphosphokinase [Selenomonas noxia ATCC 43541]
Length = 746
Score = 279 bits (713), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 223/358 (62%), Gaps = 19/358 (5%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+ KA+ AE+AHRGQ+R SGD Y++H + A +L + + V A LLHD ++D +
Sbjct: 33 IKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETVCAALLHDVVEDTHATL 92
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 93 EEMEAEFGRNIMALIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIK 146
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ +
Sbjct: 147 LADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYY 206
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L ++ E + +I+K+ + L+ +I + GR K YSI+ KM + +++
Sbjct: 207 ALVEEVKHKRQERQEFILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVN 265
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G
Sbjct: 266 EIYDLSAVRILVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY 325
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT+ MH +EFG AAHW+YKE G + Q + W R +++ Q E
Sbjct: 326 -PLEIQIRTEAMHRISEFGVAAHWKYKEAGRSIGVTDEND---QKMSWLRQMVSLQKE 379
>gi|422005240|ref|ZP_16352435.1| GTP pyrophosphokinase [Leptospira santarosai serovar Shermani str.
LT 821]
gi|417256095|gb|EKT85535.1| GTP pyrophosphokinase [Leptospira santarosai serovar Shermani str.
LT 821]
Length = 674
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 253/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|359727202|ref|ZP_09265898.1| GTP pyrophosphokinase [Leptospira weilii str. 2006001855]
gi|417779516|ref|ZP_12427301.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
gi|410780345|gb|EKR64939.1| putative GTP diphosphokinase [Leptospira weilii str. 2006001853]
Length = 674
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 170/470 (36%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|421111743|ref|ZP_15572216.1| putative GTP diphosphokinase [Leptospira santarosai str. JET]
gi|410802939|gb|EKS09084.1| putative GTP diphosphokinase [Leptospira santarosai str. JET]
Length = 674
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 253/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYNVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPIPGRFKDYIATPKTNLYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VKWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ ELR + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTELRSGDQIEIITDKRTK 457
>gi|315038166|ref|YP_004031734.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325956617|ref|YP_004292029.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|385817505|ref|YP_005853895.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
gi|312276299|gb|ADQ58939.1| ppGpp synthetase [Lactobacillus amylovorus GRL 1112]
gi|325333182|gb|ADZ07090.1| ppGpp synthetase [Lactobacillus acidophilus 30SC]
gi|327183443|gb|AEA31890.1| ppGpp synthetase [Lactobacillus amylovorus GRL1118]
Length = 746
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT+ MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEAMHQVAEYGVAAHWAYKRGN 350
>gi|385813969|ref|YP_005850362.1| PpGpp synthetase [Lactobacillus helveticus H10]
gi|323466688|gb|ADX70375.1| PpGpp synthetase [Lactobacillus helveticus H10]
Length = 749
Score = 278 bits (712), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 30 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 89
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 258
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPIPGRFKDYIAMPKVNGYQSLHTTI 318
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 319 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 353
>gi|197303672|ref|ZP_03168709.1| hypothetical protein RUMLAC_02399 [Ruminococcus lactaris ATCC
29176]
gi|197297192|gb|EDY31755.1| RelA/SpoT family protein [Ruminococcus lactaris ATCC 29176]
Length = 774
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 228/361 (63%), Gaps = 13/361 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ + AH+ Q+R SG+PY++H + ++LA + + + AG+LHD ++D ++ D
Sbjct: 62 KAYRIGKEAHKDQVRKSGEPYIIHPLWVGIILAELEMDKETIVAGMLHDVVEDTEMTLDD 121
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R ++IKLA
Sbjct: 122 ITREFGEEVALLVDGVTKLGQLS-----YSQDKLEVQAENLRKMFLAMAKDIRVIIIKLA 176
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL+ + K++ A+ET++I+ P+A RLGIS K +L++L K+ P+ + +L
Sbjct: 177 DRLHNMRTLEFMTEAKQKEKARETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVYYQL 236
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
L + E V + ++ + +++ +I V GR K +SI+ KM+ + T+D++
Sbjct: 237 VKDLNARKTEREEFVQQIVAEVSKHMENASIKAKVY-GRVKHFFSIYKKMVNQNKTLDQV 295
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 296 YDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLMGPAGQP 355
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---LQMVEWARWVLTWQCEAMSKDR 556
E+QIRT+EMH AE+G AAHW+YKE ++ + + + W R +L WQ + MS +R
Sbjct: 356 FEIQIRTEEMHKTAEYGIAAHWKYKETGGSNAKGLNSQEEKLNWLRQILEWQRD-MSDNR 414
Query: 557 S 557
Sbjct: 415 E 415
>gi|227871732|ref|ZP_03990140.1| GTP diphosphokinase, partial [Oribacterium sinus F0268]
gi|227842420|gb|EEJ52642.1| GTP diphosphokinase [Oribacterium sinus F0268]
Length = 708
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 150/377 (39%), Positives = 234/377 (62%), Gaps = 14/377 (3%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E K LAN + H + KA+ A+ H+ Q R SG+PY++H + A++L+ +
Sbjct: 20 EELLKILLANVRSYHPSDDLSMIEKAYEVAKEQHKDQKRKSGEPYIIHPLCVAIILSDLE 79
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ +AAGLLHD ++D +S + F VA LV+GV+KL+QL+ NT +
Sbjct: 80 MDKETIAAGLLHDVVEDTGMSLKQVEEMFNPDVAVLVDGVTKLTQLNL-----NTDKVEL 134
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MF++MA D R ++IKLADRLHN+ TL+ KR+ A+E+LEI+ PLA+RLG
Sbjct: 135 QAENLRKMFVSMAKDIRVIIIKLADRLHNLRTLEYQSPEKRKEKARESLEIYSPLADRLG 194
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV--- 414
IS K+++++L K+L P+ + +L+ K+ F + I+K+ Q +++ +
Sbjct: 195 ISKIKIEMDDLSLKYLEPEVYYDLAEKV--HFKREVREERIDKIVQEVREHIEESGIRAN 252
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
+ GR K +SI+ KM+ + T+D+I+D++ +R+IV+ +DCY L +H+L+ +PG+ K
Sbjct: 253 IKGRIKHFFSIYKKMVNQNKTIDQIYDLFAIRIIVDTVKDCYAVLGFIHKLYTPIPGRFK 312
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYK-EGDCQHSSF 533
DYI PK N YQSLHT V G+ VP E+QIRT EMH AEFG AAHW+YK EG ++ +
Sbjct: 313 DYIAMPKPNMYQSLHTTVIGKDGVPFEIQIRTFEMHRTAEFGIAAHWKYKEEGGSENKAT 372
Query: 534 VLQM--VEWARWVLTWQ 548
+M ++W +L WQ
Sbjct: 373 ENEMTKMKWLSEILEWQ 389
>gi|295130724|ref|YP_003581387.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
gi|291376046|gb|ADD99900.1| GTP Pyrophosphokinase, (p)ppGpp synthetase I [Propionibacterium
acnes SK137]
Length = 774
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 214/356 (60%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFCTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|282853881|ref|ZP_06263218.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|386071338|ref|YP_005986234.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
gi|422390533|ref|ZP_16470628.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|422459390|ref|ZP_16536038.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|422465021|ref|ZP_16541628.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|422465932|ref|ZP_16542508.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|422469845|ref|ZP_16546366.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|422564622|ref|ZP_16640273.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|422575800|ref|ZP_16651338.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|282583334|gb|EFB88714.1| GTP diphosphokinase [Propionibacterium acnes J139]
gi|314923577|gb|EFS87408.1| GTP diphosphokinase [Propionibacterium acnes HL001PA1]
gi|314966622|gb|EFT10721.1| GTP diphosphokinase [Propionibacterium acnes HL082PA2]
gi|314981351|gb|EFT25445.1| GTP diphosphokinase [Propionibacterium acnes HL110PA3]
gi|315092017|gb|EFT63993.1| GTP diphosphokinase [Propionibacterium acnes HL110PA4]
gi|315092856|gb|EFT64832.1| GTP diphosphokinase [Propionibacterium acnes HL060PA1]
gi|315103624|gb|EFT75600.1| GTP diphosphokinase [Propionibacterium acnes HL050PA2]
gi|327327446|gb|EGE69222.1| GTP diphosphokinase [Propionibacterium acnes HL103PA1]
gi|353455704|gb|AER06223.1| GTP pyrophosphokinase [Propionibacterium acnes ATCC 11828]
Length = 774
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 213/356 (59%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRQDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|428320218|ref|YP_007118100.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
gi|428243898|gb|AFZ09684.1| (p)ppGpp synthetase I, SpoT/RelA [Oscillatoria nigro-viridis PCC
7112]
Length = 756
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/365 (42%), Positives = 222/365 (60%), Gaps = 14/365 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
+ + +AF A H GQ R SG+PY+ H V A +L +G N+ ++AAG LHD ++D
Sbjct: 43 DSLICRAFEFARDLHEGQYRKSGEPYICHPVAVAGILRYMGGNNVMIAAGFLHDIVEDTD 102
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARA 315
++ + I + FGA V LVEGV+KLS+ N +SKT A+ MFLAMA D R
Sbjct: 103 ITLEEIEQRFGAEVRQLVEGVTKLSKF-------NFSSKTERLAENFRRMFLAMAKDIRV 155
Query: 316 VLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
+++KLADRLHNM TL+ L K++ A ET +IF PLANRLGI +K +LE+L FK+L P
Sbjct: 156 IVVKLADRLHNMRTLEHLSEEKQRSIALETRDIFAPLANRLGIGRFKWELEDLAFKYLEP 215
Query: 376 DQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + E+ + V+ D E + + L + L + I + GR K LY I+ KM +++
Sbjct: 216 EAYREIQELVAVKRADRETQLAEVTDCLRERLDNLGIKCYEVSGRPKHLYGIYAKMQRRQ 275
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
++++DI +R+IVE +DCY+AL +VH + +PG+ KDYI PK N YQSLHT V
Sbjct: 276 KGFNQVYDIAAVRIIVETNDDCYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVI 335
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEA 551
G P+EVQIRT MH AE+G AAHW+YKE +++ + W R +L WQ +
Sbjct: 336 GTSGRPIEVQIRTVAMHHIAEYGIAAHWKYKETGGSNTTVTGDDEKFTWLRQLLEWQSD- 394
Query: 552 MSKDR 556
+ DR
Sbjct: 395 LKDDR 399
>gi|407796127|ref|ZP_11143083.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
gi|407019481|gb|EKE32197.1| GTP pyrophosphokinase [Salimicrobium sp. MJ3]
Length = 733
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 228/376 (60%), Gaps = 15/376 (3%)
Query: 182 AKEFLANAQLKHKIFRED--FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGA 239
A+E + A +H + +D F+ KA A AHR Q R SG+PY++H V+ A +L +
Sbjct: 9 AEEVIDGA--RHYLNEDDLQFIRKAHEYAAWAHRDQYRKSGEPYIIHPVQVAGILVNLEL 66
Query: 240 NSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE 299
++ +A+G LHDT++D ++ + + TF VA LV+GV+KL ++ ++E +
Sbjct: 67 DAETIASGFLHDTVEDTGVTVEDLKVTFNEEVAMLVDGVTKLGKIKYKSKEEQ------Q 120
Query: 300 ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGI 358
A+ MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGI
Sbjct: 121 AENHRKMFVAMAKDLRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGI 180
Query: 359 STWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLC 416
ST K +LE+ ++LNP Q+ + + + +E V I ++ L + NI L
Sbjct: 181 STIKWELEDTALRYLNPQQYYRIVHLMKQKRNEREHYVDEVINQIRGELDNVNIE-ADLD 239
Query: 417 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 476
GR K LYSI+ KM+ + +EI+D+ +R++V + +DCY L ++H W +PG+ KDY
Sbjct: 240 GRPKHLYSIYKKMVLQSKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDY 299
Query: 477 ITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL- 535
I PK N YQSLHT V G PLEVQIRT +MH AE+G AAHW YKEG S+
Sbjct: 300 IAMPKPNLYQSLHTTVIGPKGDPLEVQIRTHDMHEIAEYGIAAHWAYKEGKQSGSTQSFE 359
Query: 536 QMVEWARWVLTWQCEA 551
+ + W R ++ WQ E
Sbjct: 360 EKLSWFREIMEWQSET 375
>gi|374993650|ref|YP_004969149.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus orientis
DSM 765]
gi|357212016|gb|AET66634.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus orientis
DSM 765]
Length = 739
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 220/379 (58%), Gaps = 21/379 (5%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E L + K R V KA++ AE AHR Q+R SG+ Y+LH +E A +L + +
Sbjct: 5 ELLVKMKKKSPQARLAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEAT 64
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+AA LLHD ++D + I + FG +A LV+GV+KL ++ ++ + + L
Sbjct: 65 IAAALLHDVVEDTEYTIADIEKNFGEEIALLVDGVTKLGRIEYKSKVEQ------QVENL 118
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
MFLAMA D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHSPAKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+LE+L F++L P+++ +L L EA + I ++ + L + I + + GR K
Sbjct: 179 WELEDLSFRYLKPEEYYDLVEGIALKRREREAYINEVIVQMREKLDEVQI-YADIAGRPK 237
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
YSI+ KM + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMTTQNKELSEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------- 533
K N YQSLHT + GE P E+QIRT EMH +E+G AAHW+YKEG + S
Sbjct: 298 KPNMYQSLHTTLIGENGEPFEIQIRTCEMHRTSEYGIAAHWKYKEGSGKECSTNTTSNKT 357
Query: 534 ----VLQMVEWARWVLTWQ 548
Q + W R +L WQ
Sbjct: 358 ASVNFEQKLSWLRQLLEWQ 376
>gi|227893456|ref|ZP_04011261.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
gi|227864735|gb|EEJ72156.1| GTP diphosphokinase [Lactobacillus ultunensis DSM 16047]
Length = 749
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 148/335 (44%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + VAAG LHDT++D ++
Sbjct: 30 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTVAAGFLHDTVEDTPVT 89
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 258
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 318
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT+ MH AE+G AAHW YK G+
Sbjct: 319 IGPGGRPLEIQIRTEAMHQVAEYGVAAHWAYKRGN 353
>gi|428776221|ref|YP_007168008.1| (p)ppGpp synthetase I SpoT/RelA [Halothece sp. PCC 7418]
gi|428690500|gb|AFZ43794.1| (p)ppGpp synthetase I, SpoT/RelA [Halothece sp. PCC 7418]
Length = 765
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 214/357 (59%), Gaps = 16/357 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H GQ R SG+PY+ H V A L+ +G S ++AAG LHD ++D ++
Sbjct: 47 LIAEAFQFAYNLHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIAAGFLHDIVEDTDIT 106
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG GV LVEGV+KLS+ +SKT +A+ MFLAMA D R V+
Sbjct: 107 CEEIQEKFGEGVRHLVEGVTKLSKFK-------FSSKTERQAENFRRMFLAMAKDIRVVV 159
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ L K+++ A ET EIF PLANRLGI +K +LE+L FK+L P+
Sbjct: 160 VKLADRLHNMRTLEHLKPEKQKQIALETREIFAPLANRLGIGRFKWELEDLSFKYLEPEA 219
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
E+ + + EA + + I+ L Q I L GR K LY I+ KM +++
Sbjct: 220 FQEIRELVADRRADREARIENVIQILHQRFDQAGIEIEELKGRPKHLYGIYQKMQQQQKE 279
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ G+R+I++ EDCY+AL V+H + +PG+ KDYI PK N YQSLHT V G
Sbjct: 280 FEEIYDLAGVRVILKTREDCYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVIGT 339
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL----QMVEWARWVLTWQ 548
P+E+QIRT EMH AE+G AAHW YKE S F + W R +L WQ
Sbjct: 340 YGKPIEMQIRTMEMHHIAEYGIAAHWLYKETGGS-SDFKPTAEDEKFTWLRQLLEWQ 395
>gi|422344010|ref|ZP_16424937.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
gi|355377758|gb|EHG24967.1| hypothetical protein HMPREF9432_00997 [Selenomonas noxia F0398]
Length = 743
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 223/358 (62%), Gaps = 19/358 (5%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+ KA+ AE+AHRGQ+R SGD Y++H + A +L + + + A LLHD ++D +
Sbjct: 30 IKKAYSFAEQAHRGQVRISGDAYIMHPLNVAYILTGLHLDDETICAALLHDVVEDTHATL 89
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG + L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IK
Sbjct: 90 EEMEAEFGRNIMALIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIK 143
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL + KR+R AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ +
Sbjct: 144 LADRLHNMRTLKYMREDKRRRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYY 203
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L ++ E + +I+K+ + L+ +I + GR K YSI+ KM + +++
Sbjct: 204 ALVEEVKHKRQERQEFILDSIQKIHEKLEAADIKAEI-KGRAKHFYSIYRKMKRDNKSVN 262
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G
Sbjct: 263 EIYDLSAVRILVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTRGY 322
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
PLE+QIRT+ MH +EFG AAHW+YKE G + Q + W R +++ Q E
Sbjct: 323 -PLEIQIRTEAMHRISEFGVAAHWKYKEAGRSIGVTDEND---QKMSWLRQMVSLQKE 376
>gi|444919613|ref|ZP_21239613.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
gi|444708165|gb|ELW49258.1| GTP pyrophosphokinase [Cystobacter fuscus DSM 2262]
Length = 740
Score = 278 bits (712), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 216/358 (60%), Gaps = 17/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A LLA + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLIHPLEVAGLLAELKLDEASIVTGLLHDTIEDTLA 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG VA LV+GV+KLS+ S A + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGPEVAQLVDGVTKLSKFSASA---TLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K++R A+ETL+I+ PLANRLGIS K +LE+L F++L P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQRRIAQETLDIYAPLANRLGISWVKTELEDLSFRYLKPQE 197
Query: 378 HTELSSKL------VECFDEAMVTSAIEKL-EQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ L K+ E + + + T KL E+ LK + + GR K +YSI+ KM
Sbjct: 198 YLALQDKIGRRKKEREKYIDDVSTLITTKLTERGLKGE------VSGRFKHVYSIYKKMK 251
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
+ + ++IHD+ R+I + CY+AL +VHQLW VPG+ KD+I PK N YQSLHT
Sbjct: 252 SQGIEFEQIHDVIAFRIITNSMPACYEALGLVHQLWKPVPGRFKDFIAIPKPNMYQSLHT 311
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
V G +EVQIRT +MH AE G AAHW YKEG S + W R ++ WQ
Sbjct: 312 TVVGPLGERIEVQIRTPDMHKVAEEGIAAHWAYKEGKALSVSKDDEKFAWLRQLMEWQ 369
>gi|441513494|ref|ZP_20995324.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
gi|441451792|dbj|GAC53285.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amicalis NBRC 100051]
Length = 789
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 85 RAYDVAEERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 144
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 145 LERDFGPEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 196
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 197 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 256
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I V GR K +SI+ KM+ K D+I
Sbjct: 257 VRLVADRAPSRDTYLARVRADINSALSAARIHATV-EGRPKHYWSIYQKMIVKGRDFDDI 315
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G P
Sbjct: 316 HDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKP 375
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 376 LEVQIRTHEMHRTAEFGIAAHWRYKENGYRKSGKKSDTTEIDDMAWMRQLLDWQREA 432
>gi|407004719|gb|EKE21022.1| hypothetical protein ACD_7C00380G0002 [uncultured bacterium]
Length = 497
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 227/368 (61%), Gaps = 22/368 (5%)
Query: 197 REDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA 256
R + +IKAF AE++H+GQ R SG+ Y HC+ TA +LA+IG S +AAGLLHD +D
Sbjct: 23 RRELIIKAFEFAEKSHQGQKRKSGEDYFKHCIATANILASIGMGSKTIAAGLLHDVPEDT 82
Query: 257 FLSYDYIFRTFGAGVADLVEGVSKLSQLS-KLARENNTASKTVEADRLHTMFLAMA-DAR 314
++ I + FG + +LVEG++KL ++ K +E + L MFLAMA D R
Sbjct: 83 PITLTEIKKEFGEDIHNLVEGITKLGKIKLKETKEEYLI------ENLRKMFLAMAADIR 136
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
V+IKLADRLHNM TL+ P KR R A+ET+EI+VP+A+RLGI K +LE+L FK ++
Sbjct: 137 VVIIKLADRLHNMRTLEFNPPEKRPRIARETMEIYVPIADRLGIGEIKAELEDLSFKFID 196
Query: 375 PDQHTELSSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
P + + KL + + E AI +LE+ ++ + I + GR K+L S+ K+ K
Sbjct: 197 PKNY-RMVKKLRDDYYKEGEKFNNQAIRELEKEIRGRKIKIAKIYGRAKNLRSLFLKLEK 255
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+++ + I+D+ +R++V DCY+ L + H+++ + G++KDYI+ PK NGYQS+HT
Sbjct: 256 REMDIGRIYDLIAIRIVVPTVSDCYEVLGITHKVYRPMVGRIKDYISLPKPNGYQSIHTT 315
Query: 492 VTG-EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--------HSSFVLQMVEWAR 542
+ G EG + +E+QIRT++MH +AEFG A+HW Y E + ++ V W +
Sbjct: 316 IFGPEGRI-MEIQIRTQKMHDEAEFGIASHWIYSENKRRDWKNYFRSKETYSENEVVWLK 374
Query: 543 WVLTWQCE 550
+ WQ E
Sbjct: 375 QLREWQSE 382
>gi|406962538|gb|EKD88859.1| hypothetical protein ACD_34C00295G0001, partial [uncultured
bacterium]
Length = 691
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 155/379 (40%), Positives = 220/379 (58%), Gaps = 31/379 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + A+ AE AH GQ RASG+PY+ HCV A++LA + VV+A LLHDT++D +
Sbjct: 28 EMITHAYKYAETAHEGQKRASGEPYITHCVAVAIILAEMQVQPIVVSAALLHDTVEDTKI 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENN-------TASKTVEAD---------- 301
+ D I + FG + LV+GV+KL+ L +++R + +K EAD
Sbjct: 88 TLDDIRKEFGTEIGGLVDGVTKLTHLPRVSRADQHDAEIFEQITKDSEADDSLLDSQLAR 147
Query: 302 ---------RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVP 351
L FLAM D R +LIKLADRLHNM TL +P KR+R A+ETL+IF P
Sbjct: 148 DRRRDLANETLRKTFLAMGEDIRVILIKLADRLHNMRTLGFMPEKKRKRIAQETLDIFAP 207
Query: 352 LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKN 409
LANRLGI K +LE+L F++ NP+++ E++ L E E + + +KLE+ L D
Sbjct: 208 LANRLGIWQLKWELEDLGFRYTNPEKYKEIAQNLSETRLERDRQMQAISDKLEKLLSDAG 267
Query: 410 ISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEV 469
+ + + R K ++SI+ KM +K + + D+ G+RLIV + CY AL ++H W +
Sbjct: 268 VK-VDISARSKHIFSIYKKMQEKNKPFELVRDLRGVRLIVPDIPSCYSALGLIHTNWRPI 326
Query: 470 PGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ 529
P + DYI PK N YQSLHT + + PLEVQIRT EM AEFG AAHW+YKE
Sbjct: 327 PNEFDDYIAGPKDNFYQSLHTAILYDDGKPLEVQIRTPEMDENAEFGIAAHWKYKE-KGP 385
Query: 530 HSSFVLQMVEWARWVLTWQ 548
H Q + W + ++ W+
Sbjct: 386 HDEKYEQRINWLKKLMEWR 404
>gi|319947807|ref|ZP_08022001.1| GTP diphosphokinase [Dietzia cinnamea P4]
gi|319438531|gb|EFV93457.1| GTP diphosphokinase [Dietzia cinnamea P4]
Length = 788
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 219/357 (61%), Gaps = 14/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AER H G R SGDPY+ H + A + A +G ++T + A LLHDT++D S
Sbjct: 83 LLARAYTLAERQHEGVYRKSGDPYITHPLAVATICAEMGMDTTTLVAALLHDTVEDTDYS 142
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + +G VA LV+GV+KL ++ + EA+ + M +AMA D R ++I
Sbjct: 143 LEQLEADYGGEVAHLVDGVTKLDKVD--------FGEAAEAETIRKMIIAMAHDPRVLVI 194
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ LP K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++
Sbjct: 195 KVADRLHNMRTMRFLPPEKQVKKARETLEVIAPLAHRLGMATVKWELEDLAFAILEPKKY 254
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + + + I +++ L+ NI V GR K +SI+ KM+ +
Sbjct: 255 QEIVRLVADRAPSRDVYLNTVINRVKADLEKANIQARV-EGRPKHYWSIYQKMIVRGREF 313
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEIHD+ G+R++ ++ DCY A+ VVH W +PG+ KDYI +P+F Y+SLHT V G
Sbjct: 314 DEIHDLVGIRVLCDDVRDCYAAIGVVHSTWKPMPGRFKDYIAQPRFGVYRSLHTTVIGPD 373
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE--WARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHWRYKE +H+ ++ E W R +L+WQ EA
Sbjct: 374 GKPLEIQIRTHEMHRNAEYGIAAHWRYKETRGKHNGDPAEVDEMAWMRQLLSWQREA 430
>gi|299144024|ref|ZP_07037104.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518509|gb|EFI42248.1| GTP diphosphokinase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 713
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 226/373 (60%), Gaps = 19/373 (5%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
+E L ++ + + + +AF A H+ Q R SG+PY++H A++LA + ++
Sbjct: 3 EELLEKIKIYNPSVEVELIEEAFNLASEHHKKQKRNSGEPYIVHPFNVALILADMNMDTA 62
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+ AGLLHDT++D ++Y+ I + FG +ADLVEGV+KL +L N + +A+
Sbjct: 63 TIIAGLLHDTIEDTDVTYEDIKKEFGVEIADLVEGVTKLKKL------NYQTKQEKQAEN 116
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M LAMA D R +++KLADRLHNM TL+ + K+ A ETLEI+ P+A+RLG+S
Sbjct: 117 IRKMVLAMARDIRVIIVKLADRLHNMRTLEYMTDAKKHEKALETLEIYAPIADRLGMSKI 176
Query: 362 KVQLENLCFKHLNPDQHTELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVL 415
K +LE+L ++L+P+ + +L VE + EA+++ ++E+ L I +
Sbjct: 177 KWELEDLSLRYLDPENYYQL----VEMVNKRRHEREALISKITLEIEKNLNKIGIHADI- 231
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K+ YSI+ KM K DEI+D+ +R++V++ +DCY L VVH LW +PG+ KD
Sbjct: 232 HGRPKNFYSIYKKMKIKGKAFDEIYDLSAVRVLVDDIKDCYGVLGVVHTLWKPIPGRFKD 291
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL 535
YI PK N YQSLHT V EVQIRT EMH AE+G AAHW+YK G + +SF
Sbjct: 292 YIAMPKPNKYQSLHTTVIDNNGETFEVQIRTFEMHQTAEYGIAAHWKYKAGVSKSTSFD- 350
Query: 536 QMVEWARWVLTWQ 548
+ + W R +L WQ
Sbjct: 351 ENLTWLRQLLEWQ 363
>gi|383787986|ref|YP_005472554.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
gi|381363622|dbj|BAL80451.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Caldisericum exile AZM16c01]
Length = 682
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 153/353 (43%), Positives = 220/353 (62%), Gaps = 11/353 (3%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ A H GQ R SG+ Y++H + A++LA + ++ AA LLHD ++D ++ + I
Sbjct: 29 AYKFALEKHSGQTRESGEEYIIHPLNVAIILANLKLDAETYAAALLHDVIEDTNVTLEDI 88
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG VA LV GV+KL + ++ E + L M LAMA D R VLIKLAD
Sbjct: 89 KSQFGETVAFLVNGVTKLRGIKSVSTEE------AHLESLRKMLLAMAQDVRVVLIKLAD 142
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM TL+ LP +++ AKET++I+VPLA+RLGI T K +LE+L F++L P+++ EL+
Sbjct: 143 RLHNMRTLNYLPSERQKEIAKETMDIYVPLAHRLGIYTMKWELEDLSFRYLEPEKYYELA 202
Query: 383 SKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
K+ + +E A V +E+L LK+ IS +V GR K+LY I+ KM++ +EI+
Sbjct: 203 RKVAKKREEREAYVNELMEELRNLLKEHGISGIV-EGRPKNLYGIYRKMIRDGKQFEEIY 261
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
DI LR+IV++ CYQ L +V+ + VPG++KDYI PK N Y+SLHT V + P
Sbjct: 262 DIIALRIIVDDIPTCYQVLGIVNNYYKLVPGRIKDYIAMPKPNFYRSLHTTVITKSGEPF 321
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
E+QIRT+EMH E G AAHW+YKEG ++ + + W R +L WQ E S
Sbjct: 322 EIQIRTREMHEIDEMGIAAHWKYKEGKSLDKNYEAK-IAWLRQMLEWQKEVRS 373
>gi|402310465|ref|ZP_10829429.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
gi|400368388|gb|EJP21399.1| putative GTP diphosphokinase [Eubacterium sp. AS15]
Length = 739
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 220/358 (61%), Gaps = 11/358 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A+ H GQ+R SG+ Y++H VE A +LA + + +AAGL+HD ++D ++ D
Sbjct: 23 KAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVASIAAGLMHDVVEDTEVTSDQ 82
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLA 321
+ FG +A LV+GV+KL +++ +E N +A+ L MF+AM D R VLIKLA
Sbjct: 83 MKSMFGEEIAKLVDGVTKLGKIAYKTKEEN------QAENLRKMFMAMGDDIRVVLIKLA 136
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL +P K +KETLEIF P+A RLG+ K ++E++ ++ PD + ++
Sbjct: 137 DRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMFKIKWEMEDIALRYTEPDFYFDM 196
Query: 382 SSKLVECF--DEAMVTSAIEKLEQAL-KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+++ E+ +T I+ L++ L K+ + + GR K+LYSI+ KM K +E
Sbjct: 197 RRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHFEIYGREKNLYSIYKKMKFKNKAFEE 256
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D +R+IV+ + +CY L +VH +W +P + KDYI PK N YQSLHT V G G
Sbjct: 257 IYDFLAIRVIVQTKAECYWVLGIVHSMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGE 316
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKD 555
+E+QIRT+EMH AE+G AAHW+YK+G H S + + + W R ++ WQ E D
Sbjct: 317 LVEIQIRTEEMHKTAEYGIAAHWKYKQGRIDPHESEMDKKLAWLRQLMDWQKEVTDPD 374
>gi|325290218|ref|YP_004266399.1| (p)ppGpp synthetase I SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
gi|324965619|gb|ADY56398.1| (p)ppGpp synthetase I, SpoT/RelA [Syntrophobotulus glycolicus DSM
8271]
Length = 718
Score = 278 bits (711), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 214/358 (59%), Gaps = 14/358 (3%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
IKA Y AE AHRGQ+R SG+ Y+ H +E A++LA + + + + A LHD +D
Sbjct: 22 IKAAYRYAEEAHRGQLRVSGEDYIQHPLEVALILAELEMDDSTIIAAFLHDVAEDTERKL 81
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I + FG V LV+GV+KL +L + V+ + L MFLAMA D R +LIK
Sbjct: 82 EDIRKVFGEEVEGLVDGVTKLGKLE------YKSKMEVQVENLRKMFLAMAKDIRVILIK 135
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL K++ A+ET+EI+ PLANRLGI K +LE+L F++L+P ++
Sbjct: 136 LADRLHNMRTLRFKTEQKQKEIAQETIEIYAPLANRLGIFRIKWELEDLSFRYLHPQEYY 195
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L L E + IE L+ L + I + GR K YSI+ KM+ + +
Sbjct: 196 DLVEGIALKRKEREEQINKVIEHLKARLGEVGIEADI-AGRPKHFYSIYKKMITQNKDLS 254
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R+IVE DCY AL V+H LW +PG+ KDYI PK N YQSLHT + G
Sbjct: 255 EIYDLTAIRVIVETVNDCYGALGVIHTLWKPIPGRFKDYIAMPKPNMYQSLHTTLIGTLG 314
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
P E+QIRT EMH AE+G AAHW+YKEG S+ Q + W R +L WQ + SKD
Sbjct: 315 EPFEIQIRTWEMHRTAEYGIAAHWKYKEGKKVESNLE-QKLSWLRQLLEWQHD--SKD 369
>gi|456865837|gb|EMF84149.1| putative GTP diphosphokinase [Leptospira weilii serovar Topaz str.
LT2116]
Length = 674
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 169/470 (35%), Positives = 252/470 (53%), Gaps = 58/470 (12%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTQYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
D + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 DDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HNM TL K++R A+ETL ++ P+A RLGI K +LE+L F+ LNP+++
Sbjct: 143 LADKTHNMRTLSFQLPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQVLNPEEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V W + +WQ
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWMYKEGKPSVSEKNVK-VRWLELLSSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +T+
Sbjct: 372 ---------DSALDPKEF---VEELKYDL-----HEDEVFVF---TPKGEILQLPKGATI 411
Query: 614 MD----------LLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D L + GR + R PL+ E+R + + D R K
Sbjct: 412 LDFAFRIHTDVGLKAKGGRINGRM----LPLRTEIRSGDQIEIITDKRTK 457
>gi|374579512|ref|ZP_09652606.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
gi|374415594|gb|EHQ88029.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus youngiae
DSM 17734]
Length = 748
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/383 (40%), Positives = 224/383 (58%), Gaps = 25/383 (6%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + + K R V KA+ AERAHR Q+R SG+ Y+LH ++ A +L + +
Sbjct: 5 ELMVKMKKKSPQARLAIVDKAYQFAERAHRNQLRNSGEDYILHPLQVAQILVELEMDEAT 64
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
VAA LLHD ++D + I + FG +A LV+GV+KL +L+ ++ + + L
Sbjct: 65 VAASLLHDVVEDTAFTIHDIEKEFGPEIALLVDGVTKLGRLAYKSKVEQ------QVENL 118
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
MFLAMA D R +LIKLADRLHNM TL + K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLRYHSVEKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+LE+L F++L P ++ +L L EA + I ++ + L + I + + GR K
Sbjct: 179 WELEDLSFRYLRPQEYYDLVEGIALKRREREAYINEVIVQMRERLNEVEI-YADIAGRPK 237
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
YSI+ KM + ++EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMKTQNKELNEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------------DC 528
K N YQSLHT + G P E+QIRT EMH +E+G AAHW+YKEG DC
Sbjct: 298 KPNMYQSLHTTLIGVHGEPFEIQIRTCEMHRTSEYGIAAHWKYKEGSSKECGRSSNNKDC 357
Query: 529 QHSSFVL---QMVEWARWVLTWQ 548
+ + + Q + W R +L WQ
Sbjct: 358 GYKTASVNFDQKLSWLRQLLEWQ 380
>gi|343924320|ref|ZP_08763871.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
gi|343765754|dbj|GAA10797.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia alkanivorans NBRC
16433]
Length = 787
Score = 278 bits (710), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 83 RAYDVAEERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 142
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 143 LERDFGQEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 194
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 195 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 254
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I V GR K +SI+ KM+ K D+I
Sbjct: 255 VRLVADRAPSRDTYLARVRADINNALSAARIQATV-EGRPKHYWSIYQKMIVKGRDFDDI 313
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G P
Sbjct: 314 HDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKP 373
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 374 LEVQIRTHEMHRTAEFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 430
>gi|124024980|ref|YP_001014096.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
gi|123960048|gb|ABM74831.1| guanosine-3',5'-bis(diphosphate) 3'-diphosphatase, (ppGpp)ase
[Prochlorococcus marinus str. NATL1A]
Length = 778
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 214/352 (60%), Gaps = 16/352 (4%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E ++ AF A + H+GQ R SG+PY+ H V A LL IGA+++V+AAG LHD ++D
Sbjct: 66 EALLVAAFDLAYQLHKGQFRKSGEPYITHPVAVADLLREIGASASVIAAGFLHDVVEDTD 125
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ + + FG+ V LVEGV+KL + NN +A+ L MFLAM+ D R V
Sbjct: 126 ITPEQLEGYFGSEVRYLVEGVTKLGGIHF----NNRTE--AQAENLRKMFLAMSSDIRVV 179
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ L K+ R A+ET EI+ PLANRLGI K +LE+L FK L PD
Sbjct: 180 LVKLADRLHNMRTISYLGEEKQIRIARETREIYAPLANRLGIGRLKWELEDLAFKLLEPD 239
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ ++ E + + ++ L+ L + + GR K LY I KM ++K
Sbjct: 240 PFREIQQQIASKRSEREERLNTTVQLLKDRLNSAGLHQCEVSGRPKHLYGIWSKMQRQKK 299
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ LR+IV + E CY+AL VVH + +PG+ KDYI PK NGYQSLHT V G
Sbjct: 300 EFHEIFDVAALRIIVLDVETCYRALAVVHDTFRPIPGRFKDYIGLPKPNGYQSLHTAVIG 359
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
P+EVQIRT EMH +EFG AAHW+YKEG D + +++ Q+VEW
Sbjct: 360 RHR-PIEVQIRTPEMHRVSEFGIAAHWKYKEGGSPANPDSEKFNWLRQLVEW 410
>gi|311069245|ref|YP_003974168.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|419820104|ref|ZP_14343718.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
gi|310869762|gb|ADP33237.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus 1942]
gi|388475754|gb|EIM12463.1| GTP pyrophosphokinase RelA/SpoT [Bacillus atrophaeus C89]
Length = 734
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 218/356 (61%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V +++++ +++ NIS GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAEREQYVEEVVDEVKNRVEEVNIS-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|306820100|ref|ZP_07453748.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551878|gb|EFM39821.1| GTP diphosphokinase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 739
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 220/358 (61%), Gaps = 11/358 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAF A+ H GQ+R SG+ Y++H VE A +LA + + +AAGL+HD ++D ++ D
Sbjct: 23 KAFEYAKSKHEGQVRRSGEKYIIHPVEVANILAELELDVASIAAGLMHDVVEDTEVTSDQ 82
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVLIKLA 321
+ FG +A LV+GV+KL +++ +E N +A+ L MF+AM D R VLIKLA
Sbjct: 83 MKSMFGEEIAKLVDGVTKLGKIAYKTKEEN------QAENLRKMFMAMGDDIRVVLIKLA 136
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL +P K +KETLEIF P+A RLG+ K ++E++ ++ PD + ++
Sbjct: 137 DRLHNMRTLKFMPPYKAVIKSKETLEIFAPIAERLGMFKIKWEMEDIALRYTEPDFYFDM 196
Query: 382 SSKLVECF--DEAMVTSAIEKLEQAL-KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+++ E+ +T I+ L++ L K+ + + GR K+LYSI+ KM K +E
Sbjct: 197 RRQIMRRLYQRESYITDMIDFLKENLAKEIPNNHFEIYGREKNLYSIYKKMKFKNKAFEE 256
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D +R+IV+ + +CY L +VH +W +P + KDYI PK N YQSLHT V G G
Sbjct: 257 IYDFLAIRVIVQTKAECYWVLGIVHGMWKPIPDRNKDYIGNPKVNNYQSLHTTVFGPGGE 316
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-HSSFVLQMVEWARWVLTWQCEAMSKD 555
+EVQIRT+EMH AE+G AAHW+YK+G H S + + + W R ++ WQ E D
Sbjct: 317 LVEVQIRTEEMHKTAEYGIAAHWKYKQGRIDPHESEMDKKLAWLRQLMDWQKEVTDPD 374
>gi|379709769|ref|YP_005264974.1| GTP pyrophosphokinase [Nocardia cyriacigeorgica GUH-2]
gi|374847268|emb|CCF64338.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((p)ppGpp synthetase) [Nocardia
cyriacigeorgica GUH-2]
Length = 803
Score = 278 bits (710), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 151/354 (42%), Positives = 218/354 (61%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A+ H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 102 RAFDVADERHAKQFRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQ 161
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ A EA+ + M +AMA D R ++IK+A
Sbjct: 162 LTADFGAEVAHLVDGVTKLDKVNLGA--------AAEAETIRKMIIAMARDPRVLVIKVA 213
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 214 DRLHNMRTMRFLPPEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEI 273
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ +V GR K +SI+ KM+ K D+I
Sbjct: 274 VRLVADRAPSRDTYLAKVRAEIVNTLAASRINAIV-EGRPKHYWSIYQKMIVKGKDFDDI 332
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 333 HDLVGIRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKP 392
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +HSS ++ + W R +L WQ EA
Sbjct: 393 LEVQIRTQDMHRTAEFGIAAHWRYKETRGKHSSDTAEVDDMAWMRQLLDWQREA 446
>gi|227903817|ref|ZP_04021622.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
gi|227868704|gb|EEJ76125.1| GTP diphosphokinase [Lactobacillus acidophilus ATCC 4796]
Length = 749
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 147/335 (43%), Positives = 211/335 (62%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 30 FVERAYEFANKAHAGQKRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 89
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG V+ +V+GV+KL++ E N+ + + A+ M +AMA D R +++
Sbjct: 90 NDELKEKFGEDVSFIVDGVTKLNKY-----EYNSHQEFL-AENHRKMLIAMAKDLRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 144 KLADRLHNMHTLQHLRPDKQRRIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 200
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E ++ I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 201 -EAYYRIVNLMDVKRSQREKYISDTIKTLKKTLDELGIKYDIY-GRPKHIYSIYKKMVNK 258
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 259 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 318
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 319 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 353
>gi|395204776|ref|ZP_10395716.1| GTP diphosphokinase [Propionibacterium humerusii P08]
gi|422439435|ref|ZP_16516258.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|422470924|ref|ZP_16547424.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|422574246|ref|ZP_16649800.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|313837766|gb|EFS75480.1| GTP diphosphokinase [Propionibacterium acnes HL037PA2]
gi|314927352|gb|EFS91183.1| GTP diphosphokinase [Propionibacterium acnes HL044PA1]
gi|314972703|gb|EFT16800.1| GTP diphosphokinase [Propionibacterium acnes HL037PA3]
gi|328907438|gb|EGG27204.1| GTP diphosphokinase [Propionibacterium humerusii P08]
Length = 773
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 213/356 (59%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 LIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDEQTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG VA LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEVALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + + L + I V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVISIVRKDLDEAGIKATVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPDAVSRGIQPDGTDLSWVQSLNQWSK 417
>gi|222055238|ref|YP_002537600.1| (p)ppGpp synthetase I SpoT/RelA [Geobacter daltonii FRC-32]
gi|221564527|gb|ACM20499.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter daltonii FRC-32]
Length = 716
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 217/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 ELVRKAYVFCAKVHQGQTRLSGEPYLVHPMEVAGVLAELKLDVPTVVTGLLHDTVEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG VA LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TLEELEEMFGPEVARLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ AKETL+I+ P+ANRLGIS K +LE+L F++L+P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIAKETLDIYAPIANRLGISWVKSELEDLSFRYLDPQI 194
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L+SK+ + E V ++ ++ L D I V GR K LYSI+ KM + +
Sbjct: 195 YYDLASKVTKKKKERETYVDEVMQIIKAKLVDHGIKGEV-SGRSKHLYSIYRKMQSRSVD 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DEI+D+ +R++VE+ +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 IDEIYDLIAIRVMVEDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT EMH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 YGERMEVQIRTSEMHRVAEAGIAAHWKYKEGKGYDEKEVKRFT-WLRQLLEWQQE 367
>gi|134295029|ref|YP_001118764.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387901650|ref|YP_006331989.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
gi|134138186|gb|ABO53929.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia vietnamiensis G4]
gi|387576542|gb|AFJ85258.1| GTP pyrophosphokinase, (p)ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia sp. KJ006]
Length = 788
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/379 (39%), Positives = 223/379 (58%), Gaps = 17/379 (4%)
Query: 176 GNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLA 235
NL T E+L ++K V AF+ ++ AH GQ R SG+PY+ H V A + A
Sbjct: 56 ANLTTALAEYLGPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICA 108
Query: 236 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 295
++ V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE
Sbjct: 109 GWKLDAQAVMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE---- 164
Query: 296 KTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 354
+A+ M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+
Sbjct: 165 --AQAENFRKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAH 222
Query: 355 RLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISF 412
RLG++ +L+++ F + NP ++ L K +++ +E ++A+ D I
Sbjct: 223 RLGLNNTYRELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMTDAKIDA 282
Query: 413 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 472
+ GR K++YSI+ KM K+L+ ++ D+YG R++V+N DCY + +H L+ VPGK
Sbjct: 283 EI-TGREKTIYSIYRKMRDKQLSFSQVLDVYGFRVVVDNPLDCYTCIGALHALYKPVPGK 341
Query: 473 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
KDYI PK NGYQSLHT + G P+E Q+RT++MH AE G AAHW YK G +
Sbjct: 342 FKDYIAIPKINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLND 401
Query: 533 FVLQMVEWARWVLTWQCEA 551
+ +W + +L Q EA
Sbjct: 402 VQKRAHQWLKSLLDIQSEA 420
>gi|409390045|ref|ZP_11241816.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
gi|403199872|dbj|GAB85050.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3'-pyrophosphohydrolase [Gordonia rubripertincta NBRC
101908]
Length = 784
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 80 RAYDVAEERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 139
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 140 LERDFGQEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 191
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 192 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 251
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I V GR K +SI+ KM+ K D+I
Sbjct: 252 VRLVADRAPSRDTYLARVRADINNALSAARIQATV-EGRPKHYWSIYQKMIVKGRDFDDI 310
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G P
Sbjct: 311 HDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKP 370
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 371 LEVQIRTHEMHRTAEFGIAAHWRYKESGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 427
>gi|255994169|ref|ZP_05427304.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
gi|255993837|gb|EEU03926.1| GTP diphosphokinase [Eubacterium saphenum ATCC 49989]
Length = 733
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 214/354 (60%), Gaps = 11/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A + H GQ R SG+PY++H A +LA +G + + AGLLHD ++D + +
Sbjct: 25 EAYDVAYKQHNGQKRKSGEPYIIHPEAVAKILAELGMDEDTLIAGLLHDVIEDTDFTPEM 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG+ V LVEGV+KL L +E V+A+ + MFLAM+ D R ++IKLA
Sbjct: 85 VEEKFGSDVRHLVEGVTKLGTLVFETKEE------VQAENMRKMFLAMSKDIRVLIIKLA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ T++ + K + +ETL+I+ PLA+RLGI + K +LE++ K L+P+ + EL
Sbjct: 139 DRLHNLRTINYMSQDKIKLKCQETLDIYAPLASRLGIYSIKFELEDIALKCLHPETYEEL 198
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E E + I ++E+ALK I + + GR K YSI+ KM +K ++DEI
Sbjct: 199 KKNVNEKKTEREKAIKDVISEVERALKPLGIEYTIY-GRSKHFYSIYKKMQHQKKSLDEI 257
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ +R+IV + DCY L VVH +W +PG+ KDYI PK N YQS+HT V G P
Sbjct: 258 FDLTAIRIIVNEKSDCYAVLGVVHNIWTPIPGRFKDYIAMPKMNMYQSIHTTVIGSIGRP 317
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQCEAM 552
EVQIRTK+MH AE+G AAHW+YKEG S + + W R L WQ + +
Sbjct: 318 FEVQIRTKKMHELAEYGIAAHWKYKEGKSSASEEADDIKLAWLRQTLEWQKDVV 371
>gi|404497180|ref|YP_006721286.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|418066658|ref|ZP_12704018.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
gi|78194783|gb|ABB32550.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter metallireducens GS-15]
gi|373560151|gb|EHP86423.1| (p)ppGpp synthetase I, SpoT/RelA [Geobacter metallireducens RCH3]
Length = 716
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 13/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V KA+ + H+GQ R SG+PYL+H +E A LLA + + V GLLHDT++D
Sbjct: 21 DLVRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGLLADLRLDVPTVVTGLLHDTIEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA VA+LV+GV+K+S++ +E + +A+ M LAMA D R +L
Sbjct: 81 TREELEGLFGAEVANLVDGVTKISKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ A+ETL+I+ P+ANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSIARETLDIYAPIANRLGISWIKSELEDLSFRYLEPQI 194
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 434
+ +L+SK+ + E S ++++ + + DK + + + GR K LYSI KM + +
Sbjct: 195 YYDLASKVTKKKKER--ESYVDEVRKIIVDKLVEHDIKGEVFGRSKHLYSIWRKMQSRSV 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+D+I+D+ +R++V + +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 DIDQIYDLIAIRVMVNDIRECYEVLGLIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT +MH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 313 PHGERMEVQIRTYDMHGVAEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|409990716|ref|ZP_11274054.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
gi|409938424|gb|EKN79750.1| (p)ppGpp synthetase I [Arthrospira platensis str. Paraca]
Length = 764
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+PY+ H + A LL +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGLLRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESNFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRAIREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSFRPIPGRFKDYIGLPKANRYQSLHTGVIGN 336
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE + + E W R +L WQ +
Sbjct: 337 TGRPVEVQIRTVEMHHIAEYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|436839902|ref|YP_007324280.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432168808|emb|CCO22174.1| GTP pyrophosphokinase [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 737
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/356 (42%), Positives = 215/356 (60%), Gaps = 21/356 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ + RAH GQMR SG+PYL H + A LLA + + VAAGLLHDT++D +
Sbjct: 38 LIQRAYVFSARAHEGQMRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDTT 97
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAVL 317
D I FG VAD+V+GV+K+S + + SK + +A+ + M LAMA D R ++
Sbjct: 98 IDEIVELFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVLM 150
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TLD K+Q A+ETL+I+ PLANRLG+ K LE+LC +L PD
Sbjct: 151 VKLADRLHNMRTLDFQKSYKQQLIAQETLDIYSPLANRLGLYMVKRDLEDLCLYYLKPDV 210
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ L + V + L LK+ I + GR K +SIH KM ++ L
Sbjct: 211 YNAITDGLERQHTLGKEYVDKVLALLNDILKNNEIEGTIY-GRTKHKFSIHKKMQRQGLN 269
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+DE+HDI R+IV++ +DCY L +VH +W + G+ KDYI+ PK N YQSLHT V G
Sbjct: 270 LDEVHDIIAFRVIVDSVKDCYSVLGLVHSMWKPISGRFKDYISIPKANMYQSLHTTVIGP 329
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---------DCQHSSFVLQMVEWAR 542
+E+QIRT+EM AE+G AAHW+YKE D + S++ Q+++W R
Sbjct: 330 EGERIEIQIRTEEMQQVAEYGIAAHWQYKETGTSVAKQNRDAERFSWLRQIMDWQR 385
>gi|300781066|ref|ZP_07090920.1| GTP diphosphokinase [Corynebacterium genitalium ATCC 33030]
gi|300532773|gb|EFK53834.1| GTP diphosphokinase [Corynebacterium genitalium ATCC 33030]
Length = 759
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/359 (42%), Positives = 217/359 (60%), Gaps = 16/359 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + +A+ AER H G R SGDPY+ H + A + A IG ++T V A LLHDT++D
Sbjct: 54 EVLTRAYDTAERLHEGVSRKSGDPYITHPLAVATICAEIGMDTTTVVAALLHDTVEDTDY 113
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + FG VA LV+GV+KL +++ EA+ + M +AMA D R ++
Sbjct: 114 SLADLTEDFGPEVARLVDGVTKLDKVA--------FGSAAEAETVRKMVVAMAQDPRVLV 165
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IK+ADRLHNM T+ LP K+Q+ A+ETLE+ PLA+RLG++T K +LE+L F L P +
Sbjct: 166 IKVADRLHNMRTMRFLPPEKQQKKARETLEVIAPLAHRLGMATVKWELEDLAFAILYPKK 225
Query: 378 HTELSSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ + E D A+ E ++ LK + V+ GR K +SI+ KM+ +
Sbjct: 226 YEEIVRLVAERAPSRDRALKEITAE-IQTELKTNGVKADVM-GRPKHYWSIYQKMVVRGR 283
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI D+ G+R++V+N DCY A+ VVH +++ +PG+ KDYI+ P+F YQSLHT V
Sbjct: 284 DFNEIFDLVGIRILVDNVSDCYAAIGVVHSMYSAMPGRFKDYISNPRFGVYQSLHTTVMN 343
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCEA 551
+ PLE+Q+RT EMH AEFG AAHWRYKE H L + W R +L WQ EA
Sbjct: 344 DSGRPLEIQVRTHEMHYNAEFGVAAHWRYKETKGSHKGDQAELDQMTWMRQLLDWQKEA 402
>gi|352518328|ref|YP_004887645.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
gi|348602435|dbj|BAK95481.1| GTP pyrophosphokinase [Tetragenococcus halophilus NBRC 12172]
Length = 737
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 217/357 (60%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A AH+ Q R SG+PY++H ++ A +LA + + +A G LHD ++D ++
Sbjct: 27 FVKKAYEYAVDAHKDQYRKSGEPYIIHPIQVAGILAELHMDPHTIAVGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL ++ + E A + M LAMA D R +++
Sbjct: 87 LDDLKNEFGHDVAMIVDGVTKLGKIKYKSHEEQLA------ENYRKMLLAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A+ETLEI+ PLA+RLGIS K +LE+L ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRDDKQRRIARETLEIYAPLADRLGISRIKWELEDLSLRYLNPKQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + DE V A+E++ A +D +I + + GR K +YS++ KM+ KK
Sbjct: 201 YRIVHLMQSKRDEREKYVKQAVEEIRIATEDLDI-YAEIYGRPKHIYSVYRKMVDKKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 DEIYDLLAIRVIVDSIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSIHTTVIGPN 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT +MH AEFG AAHW YKEG + + V W + +L Q E+
Sbjct: 320 GNPVEIQIRTHQMHEIAEFGVAAHWAYKEGHTEEIQPDEMTNQVGWFKELLELQDES 376
>gi|398311619|ref|ZP_10515093.1| GTP pyrophosphokinase RelA/SpoT [Bacillus mojavensis RO-H-1]
Length = 734
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG S + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAASESATFEKKLSWFREILEFQNES 375
>gi|349611483|ref|ZP_08890718.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
gi|348608576|gb|EGY58556.1| hypothetical protein HMPREF1027_00145 [Lactobacillus sp. 7_1_47FAA]
Length = 750
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 208/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT++MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
>gi|291278481|ref|YP_003495316.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
gi|290753183|dbj|BAI79560.1| GTP pyrophosphokinase [Deferribacter desulfuricans SSM1]
Length = 710
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 157/388 (40%), Positives = 230/388 (59%), Gaps = 33/388 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A HRGQ+R SG+PYL H + A +LA + + V AGLLHDTL+D +Y+
Sbjct: 30 KAYVYAATKHRGQLRKSGEPYLSHPLNVAYILAEMNMDLDTVVAGLLHDTLEDTDATYEE 89
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GVSK+ ++ N + + +A+ M ++M+ D R ++IKLA
Sbjct: 90 LVNLFGEDVAFLVDGVSKIGKI------NFKSHEEKQAEAFRKMLISMSKDIRVIVIKLA 143
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T++ LP K++R AKETLEI+ PLA+RLGI+ K +LE+L F+ LNP+ + ++
Sbjct: 144 DRLHNMRTINFLPEEKKKRIAKETLEIYAPLAHRLGIAWIKWELEDLSFRILNPEAYYDI 203
Query: 382 SSK--LVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+K L E + I +++ L+ + I V GR K YSI+ KM++KK + DEI
Sbjct: 204 YNKVKLKRSEREQYLKEVINIVKEVLEKEGIKAEV-TGRPKHFYSIYTKMIRKKTSFDEI 262
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR++V +CY L ++H LW + G++KDYI PK N YQSLHT V G +
Sbjct: 263 YDLLALRVLVNTVGECYAVLGIIHNLWKPIQGRIKDYIAMPKSNMYQSLHTTVIGPRGMK 322
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDC----QHSSFVLQMVEWARWVLTWQ------- 548
+E QIRT EMH AE G AAHW+YKEG + ++F+ W R +L +
Sbjct: 323 VEFQIRTYEMHRIAEEGIAAHWKYKEGKVFDPKEDTTFI-----WLRQLLEQKDLKDPKE 377
Query: 549 -CEAMSKDRSCVG------NGDSIKPPC 569
EA+ +D + NGD ++ P
Sbjct: 378 FVEALKEDVLPIQIYVFTPNGDIVELPV 405
>gi|170079402|ref|YP_001736040.1| GTP pyrophosphokinase [Synechococcus sp. PCC 7002]
gi|169887071|gb|ACB00785.1| GTP pyrophosphokinase/ RelA/SpoT family protein [Synechococcus sp.
PCC 7002]
Length = 755
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 159/354 (44%), Positives = 216/354 (61%), Gaps = 13/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A H GQ R SG+PY+ H + A LL +G N ++AAG LHD ++D +S +
Sbjct: 48 EAFRFAHALHEGQTRKSGEPYIAHPIAVAGLLLDLGGNGAMIAAGFLHDVVEDTEVSPEE 107
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKL 320
I FGA LVEGV+KL++ + +SKT +A+ MFL+MA D R +++KL
Sbjct: 108 IEERFGAETRKLVEGVTKLTKFT-------FSSKTERQAENFRRMFLSMAEDIRVIVVKL 160
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM TL+ L K++R A ET EIF PLANRLGI +K +LE+LCFK+L + +
Sbjct: 161 ADRLHNMRTLEHLRPDKQERIALETREIFAPLANRLGIWRFKWELEDLCFKYLEREAYRS 220
Query: 381 LSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+ + E EA + AIE + L+ + + GR K LYSI+ KM ++ DE
Sbjct: 221 MQKHISEKRTEREAKLEEAIEIIRDRLRHLGLHVWEIKGRPKHLYSIYHKMQRQHKEFDE 280
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I DI G+R+IVE ++CY+AL V+H + +PG+ KDYI PK N YQSLHT V G
Sbjct: 281 IFDIAGIRIIVETNDECYRALAVIHDAFKPIPGRFKDYIGLPKPNRYQSLHTTVVGLNGR 340
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE +SF + W R ++ WQ +
Sbjct: 341 PLEVQIRTMEMHHIAEYGIAAHWKYKEAGHSAASFTSEDEKFTWLRQLIEWQSD 394
>gi|302874945|ref|YP_003843578.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium cellulovorans 743B]
gi|307690437|ref|ZP_07632883.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
gi|302577802|gb|ADL51814.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium cellulovorans 743B]
Length = 724
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 215/356 (60%), Gaps = 10/356 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
++ + KA++ E+AH GQ R SG+ Y +H VE A +L +G ++ + AGLLHD ++D
Sbjct: 18 KELIEKAYFFTEKAHEGQKRLSGEAYFIHPVEVAKILTEMGMDTATIVAGLLHDVVEDTD 77
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+Y+ + R F VADLV+GV+KL ++ +E +AD + M LAM D R +
Sbjct: 78 FTYEDMVREFTKEVADLVDGVTKLDKIHYRTKEE------AQADNIRKMLLAMTKDIRVI 131
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM T+ K++ AKET++I+ PLA+RLGI K +LE+LC ++L+
Sbjct: 132 LIKLADRLHNMRTIKFQSPDKQKEIAKETMDIYAPLAHRLGIFKIKWELEDLCLRYLHST 191
Query: 377 QHTELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +L K+ E + I++L L NI + GR K YSI+ KM+ K
Sbjct: 192 EYYDLVQKIASKRTERENDIREIIDELINNLGASNIHADI-DGRPKHFYSIYKKMVNKNK 250
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++D+I D+ +R++V+ +DCY L +VH ++ +PG+ KDYI PK N YQSLHT V
Sbjct: 251 SLDQIFDLMAVRILVKTIKDCYATLGIVHTMYKPIPGRFKDYIAMPKPNMYQSLHTTVFA 310
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+ P E+QIRT +MH AEFG AAHW+YKEG + + W R V+ +Q E
Sbjct: 311 KNGKPFEIQIRTFDMHKTAEFGIAAHWKYKEGGSSNDKDFDNKLGWIRDVIEYQTE 366
>gi|197121709|ref|YP_002133660.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter sp. K]
gi|220916506|ref|YP_002491810.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
gi|196171558|gb|ACG72531.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter sp. K]
gi|219954360|gb|ACL64744.1| (p)ppGpp synthetase I, SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-1]
Length = 746
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 217/362 (59%), Gaps = 27/362 (7%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + V GLLHDT++D
Sbjct: 42 DLIKKAYVYSAKVHQGQIRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLA 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DAR 314
+ I FG +ADLV+GV+KLSQ TA+ T E A+ M +AMA D R
Sbjct: 102 TKKEISELFGPEIADLVDGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIR 153
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+L+KLADR HNM TLDA+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L
Sbjct: 154 VLLVKLADRTHNMRTLDAMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLR 213
Query: 375 PDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P ++EL+ K+ V + E V +E + + L + + V GR K +YSI+ KM +
Sbjct: 214 PGDYSELNEKVSVRAREKERFVAEVVEIIRRRLAEAGMQADV-SGRVKHVYSIYRKMRQL 272
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ ++I D+ G R+IV+ +CY++L VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 273 DVDFEQIQDVVGFRVIVDTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTV 332
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE------------GDCQHSSFVLQMVEW 540
G +EVQIRT+EMH AE G AAHW YKE D ++ Q+VE+
Sbjct: 333 VGPAGERIEVQIRTREMHRIAEEGVAAHWAYKEKGRDGKGAELSRKDAASFGWLRQLVEF 392
Query: 541 AR 542
R
Sbjct: 393 QR 394
>gi|256823641|ref|YP_003147604.1| (p)ppGpp synthetase I SpoT/RelA [Kangiella koreensis DSM 16069]
gi|256797180|gb|ACV27836.1| (p)ppGpp synthetase I, SpoT/RelA [Kangiella koreensis DSM 16069]
Length = 705
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 158/352 (44%), Positives = 215/352 (61%), Gaps = 12/352 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AERAH GQMR+SGDPY+ H V A +LA + + + A L+HD ++D +S
Sbjct: 28 RAYQLAERAHEGQMRSSGDPYITHPVAAAHILADLHLDHQTIMAALMHDVIEDCDVSKQD 87
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VADLVEGVSKL+Q+ ++E +A+ M +AM D R +LIKLA
Sbjct: 88 LSGEFGETVADLVEGVSKLTQIDFQSKEQ------AQAENFRKMMMAMTQDIRVILIKLA 141
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL AL KR+R A+ETLEI+ P+ANRLGI K QLE L F ++ P ++ L
Sbjct: 142 DRLHNMQTLGALRPDKRRRIARETLEIYAPIANRLGIYRLKEQLELLGFANMYPLRYRVL 201
Query: 382 --SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S K V + +V E+L LKD I+ V+ GR KS+YSI+ KM K T E+
Sbjct: 202 QHSVKKVRGHRKEIVERITEQLRTRLKDSRITSKVI-GREKSVYSIYKKMRDKVGTFTEV 260
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIY R+I ++E+ CY+ L +H L+ +PG+ KDYI PK NGYQSLHTV+ + +
Sbjct: 261 MDIYAFRVITDSEDSCYRILGQIHNLFKPIPGRFKDYIAIPKANGYQSLHTVLRNKTGMH 320
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
+EVQIRT++M AE G AAHW YK G + + EW + ++ Q A
Sbjct: 321 IEVQIRTEQMDQMAENGVAAHWLYKTGSAHPAE--TKAREWLQSLVELQQSA 370
>gi|325912633|ref|ZP_08175016.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
gi|325478054|gb|EGC81183.1| GTP diphosphokinase [Lactobacillus iners UPII 60-B]
Length = 750
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 208/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT++MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
>gi|160893486|ref|ZP_02074271.1| hypothetical protein CLOL250_01037 [Clostridium sp. L2-50]
gi|156864881|gb|EDO58312.1| RelA/SpoT family protein [Clostridium sp. L2-50]
Length = 777
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 221/357 (61%), Gaps = 24/357 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A +AH GQ+R SG+PY++H + A++LA + + + AG+LHD ++D ++ +
Sbjct: 71 KAYKVASKAHEGQLRKSGEPYIMHPLCVAIILAELELDKETIVAGILHDVVEDTVMTSEE 130
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I F VA LVEGV+KL+QL + T V+A+ L MFL+MA D R +LIKLA
Sbjct: 131 IAAEFSEEVAFLVEGVTKLTQL-----KMTTDKIEVQAENLRKMFLSMAKDIRVILIKLA 185
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ TL K+ A+ET++I+ P+A+RLGIS KV+L++L K+L P+ + +L
Sbjct: 186 DRLHNLRTLQYQSPAKQVEKARETMDIYAPIAHRLGISKIKVELDDLSMKYLMPEVYKDL 245
Query: 382 SSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++++ E + + +V + ++ A D I GR K L+SI+ KM + T
Sbjct: 246 TAQIDARMHEREAYIKRIVADVKKHIDNAHLDAEID-----GRVKHLFSIYKKMKNQNKT 300
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+DI+ +R+ VE DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 301 LDQIYDIFAVRIKVETVRDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGP 360
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + V+Q E W R +L WQ
Sbjct: 361 EGQPFEIQIRTFEMHRTAEYGIAAHWKYKEN---ITGTVMQKEEEKLSWLRQILEWQ 414
>gi|422549838|ref|ZP_16625638.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
gi|314918146|gb|EFS81977.1| GTP diphosphokinase [Propionibacterium acnes HL050PA1]
Length = 774
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRPDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ KDYI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKDYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|312874138|ref|ZP_07734172.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
gi|311090208|gb|EFQ48618.1| GTP diphosphokinase [Lactobacillus iners LEAF 2052A-d]
Length = 750
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 208/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT++MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
>gi|256826847|ref|YP_003150806.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
gi|256582990|gb|ACU94124.1| (p)ppGpp synthetase, RelA/SpoT family [Cryptobacterium curtum DSM
15641]
Length = 856
Score = 277 bits (709), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 217/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A AH+GQ R SG+P++ H VE A++L+ + ++ +AA LLHD ++D
Sbjct: 133 DLLRRAFEFARSAHKGQCRKSGEPFVSHPVEVALILSDLRMDAETLAAALLHDVVEDTDT 192
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVL 317
+ + + FG VADLV+GV+K++ ++ EN + +A + MF+AM D R ++
Sbjct: 193 TKEELAHEFGEAVADLVDGVTKIT---RIEVENLSDE---QAATIRKMFVAMNKDIRVIV 246
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL AL +R + ETLEI+ P+A+RLGI K +LE+L F +L P +
Sbjct: 247 IKLADRLHNMRTLSALREDRRIFKSHETLEIYAPIAHRLGIGQIKWELEDLAFFYLEPGK 306
Query: 378 HTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++S + E E + + I+ L ++ +I ++ GR K LYSI+ KM
Sbjct: 307 FKQISRMVAESRMEREEYLGNVIDILHGEMEKADIGCQIM-GRPKHLYSIYRKMTTHGKG 365
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ +R+IV+ CY AL VH LW +PG+ KDYI PK+N YQSLHT V G
Sbjct: 366 FSEIYDLIAVRIIVDTVAQCYSALGAVHSLWHPMPGRFKDYIAMPKYNMYQSLHTTVIGP 425
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT+EMH +E+G AAHWRYKEG S F Q+ W R ++ WQ E
Sbjct: 426 AGRPLEVQIRTEEMHRMSEYGVAAHWRYKEGAKGESGFDRQLA-WLRQMMDWQDE 479
>gi|324999169|ref|ZP_08120281.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudonocardia sp. P1]
Length = 777
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/353 (43%), Positives = 217/353 (61%), Gaps = 13/353 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + + +LA +G ++T + A LLHDT++D S +
Sbjct: 73 RAYDVAESKHEGQTRKSGDPYITHPLAVSTILAELGMDTTTLVAALLHDTVEDTDYSLER 132
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E TA+ EA+ + M +AMA D R ++IKL+
Sbjct: 133 LRTDFGDEVAHLVDGVTKLDKV-----EFGTAA---EAETIRKMVVAMARDPRVLVIKLS 184
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+ + A ETLE+F PLA+RLG++T K++LE+L F L P ++ E+
Sbjct: 185 DRLHNMRTMRFLRPEKQVKKANETLEVFAPLAHRLGMATVKLELEDLSFAILQPKKYQEI 244
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I+++ L I V GR K YSI+ KM+ K D+I
Sbjct: 245 VRLVADRAPSRDTYLRQVIDEVTSQLDSARIPAKV-EGRPKHYYSIYRKMIVKGRDFDDI 303
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++VE DCY A+ +VH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 304 HDLVGVRVLVEEVRDCYAAIGMVHALWQPMPGRFKDYIAQPRFGVYQSLHTTVIGPDGKP 363
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-LQMVEWARWVLTWQCEA 551
LEVQIRT MH AE+G AAHWRYKE S V ++ + W R +L WQ EA
Sbjct: 364 LEVQIRTHAMHRTAEYGIAAHWRYKEIKGGQSKEVEVEEMAWMRQLLDWQREA 416
>gi|259500575|ref|ZP_05743477.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|302191266|ref|ZP_07267520.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus iners AB-1]
gi|329920168|ref|ZP_08276999.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
gi|259167959|gb|EEW52454.1| GTP diphosphokinase [Lactobacillus iners DSM 13335]
gi|328936622|gb|EGG33066.1| GTP diphosphokinase [Lactobacillus iners SPIN 1401G]
Length = 750
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 208/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT++MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
>gi|290961828|ref|YP_003493010.1| guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase RelA
[Streptomyces scabiei 87.22]
gi|260651354|emb|CBG74476.1| guanosine 3',5'-bis-pyrophosphate (ppGpp) synthetase RelA
[Streptomyces scabiei 87.22]
Length = 847
Score = 277 bits (708), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 162/398 (40%), Positives = 230/398 (57%), Gaps = 43/398 (10%)
Query: 172 NIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETA 231
IV GN +A+++ R+ + KA+ AER HRGQ R SGDPY+ H +
Sbjct: 113 RIVRGN----------DAKIETSTLRQ--IEKAYQVAERWHRGQKRKSGDPYITHPLAVT 160
Query: 232 MLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAREN 291
+LA +G + + AGLLHDT++D D + R FG VA LV+GV+KL ++
Sbjct: 161 TILAELGMDPATLMAGLLHDTVEDTEYGLDQLRRDFGDSVALLVDGVTKLDKVK------ 214
Query: 292 NTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFV 350
+ +A+ + M +AMA D R ++IKLADRLHNM T+ L K+++ A+ETLEI+
Sbjct: 215 --FGEAAQAETVRKMVVAMAKDPRVLVIKLADRLHNMRTMRYLKREKQEKKARETLEIYA 272
Query: 351 PLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECF---DE--AMVTSAIEKLEQAL 405
PLA+RLG++T K +LE+L F L P + E+ + E DE A+VT ++++Q L
Sbjct: 273 PLAHRLGMNTIKWELEDLAFAILYPKMYDEIVRLVAERAPKRDEYLAIVT---DEVQQDL 329
Query: 406 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 465
+ I V GR K YS++ KM+ + EI+D+ G+R++V+ DCY AL VH
Sbjct: 330 RAARIKATV-TGRPKHYYSVYQKMIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHAR 388
Query: 466 WAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
W VPG+ KDYI PKFN YQSLHT V G P+E+QIRT +MH +AE+G AAHW+YK+
Sbjct: 389 WNPVPGRFKDYIAMPKFNMYQSLHTTVIGPNGKPVELQIRTFDMHRRAEYGIAAHWKYKQ 448
Query: 526 GDCQHSSFV-------------LQMVEWARWVLTWQCE 550
+S V L + W R +L WQ E
Sbjct: 449 EAVAGASKVRSDQPRTTGKDDHLNDMAWLRQLLDWQKE 486
>gi|357402877|ref|YP_004914802.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
gi|337769286|emb|CCB77999.1| GTP pyrophosphokinase (RelA/SpoT) [Streptomyces cattleya NRRL 8057
= DSM 46488]
Length = 820
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 219/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 106 RAFQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 165
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 166 LRRDFGEQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 217
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 218 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 277
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 278 VRLVAERAPKRDEYLAVVT---DQVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 333
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 334 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 393
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 394 GKPVELQIRTFDMHRRAEYGIAAHWKYKQDAVAGASKVRTDGPKSAKADDAVNDMAWLRQ 453
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 454 LLDWQKE 460
>gi|75911185|ref|YP_325481.1| (p)ppGpp synthetase I [Anabaena variabilis ATCC 29413]
gi|75704910|gb|ABA24586.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Anabaena
variabilis ATCC 29413]
Length = 751
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 214/357 (59%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A + H GQ R SG+ Y+ H + A LL +G + ++AAG LHD ++D ++
Sbjct: 43 LICRAFDFAYQLHHGQYRKSGELYISHPIAVAGLLRDLGGSPAMIAAGFLHDVVEDTDVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R ++
Sbjct: 103 IEEIEERFGPEVKQLVEGVTKLSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIV 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L P+
Sbjct: 156 VKLADRLHNMRTLQYMSEDSRRRSAQETRDIFAPLANRLGIWRIKWELEDLAFKNLEPEA 215
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++ + E D E + A L L+ I L + GR K LYSI+ KM +++
Sbjct: 216 FRQMQKYVSEKRDAREEKLAKATAILRDRLQQAGIRCLDISGRPKHLYSIYQKMHRQQKE 275
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ LR+IVE E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 276 FNEIYDLAALRIIVETNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGL 335
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE +S + W R +L WQ +
Sbjct: 336 TGRPLEVQIRTMEMHRIAEYGIAAHWKYKETGGSNSLITTSDEKFTWLRQLLEWQSD 392
>gi|325912114|ref|ZP_08174512.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
gi|325476064|gb|EGC79232.1| GTP diphosphokinase [Lactobacillus iners UPII 143-D]
Length = 750
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/332 (46%), Positives = 208/332 (62%), Gaps = 12/332 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH GQ R SG PY++H + A LA++G + VAAG LHDT++D ++
Sbjct: 27 FVEKAYAFAKDAHEGQFRESGQPYIIHPTQVAGTLASLGLDPDTVAAGYLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + FG VA +VEGV+KL ++ + + AD M +AMA D R +++
Sbjct: 87 NEDIKKEFGKDVAFIVEGVTKLKKIKYKS----KTHEEYLADNHRKMLIAMAKDLRVIMV 142
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD L K++R A ETL+I+ PLA+RLGI T K +LE++ +LNP Q+
Sbjct: 143 KLADRLHNMHTLDHLRPDKQRRIADETLDIYAPLADRLGIGTIKWELEDMSLHYLNPQQY 202
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK E E ++SAI L+ L D I + + GR K +YSI+ KM+ K
Sbjct: 203 YRIVNLMQSKRSE--RERYISSAISTLKANLDDLGIKYEIF-GRPKHIYSIYKKMVNKHK 259
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ +R+IV+ DCY L VH W +PG+ KDYI PK NGYQSLHT + G
Sbjct: 260 EFSEIYDLLAVRVIVKTVRDCYAVLGAVHTKWTPMPGRFKDYIAVPKANGYQSLHTTIIG 319
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLE+QIRT++MH AE+G AAHW YKEG
Sbjct: 320 PGGKPLEIQIRTEKMHQIAEYGVAAHWAYKEG 351
>gi|221310698|ref|ZP_03592545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|221315022|ref|ZP_03596827.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. NCIB
3610]
gi|221319943|ref|ZP_03601237.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221324224|ref|ZP_03605518.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SMY]
gi|255767631|ref|NP_390638.2| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. 168]
gi|321312288|ref|YP_004204575.1| GTP pyrophosphokinase [Bacillus subtilis BSn5]
gi|384176340|ref|YP_005557725.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|386759315|ref|YP_006232531.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402776914|ref|YP_006630858.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis QB928]
gi|418032062|ref|ZP_12670545.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|428280212|ref|YP_005561947.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|430755894|ref|YP_007208735.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452915236|ref|ZP_21963862.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
gi|251757446|sp|O54408.3|RELA_BACSU RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2739435|gb|AAC46041.1| (p)ppGpp synthetase [Bacillus subtilis subsp. subtilis str. JH642]
gi|225185259|emb|CAB14719.2| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
subtilis str. 168]
gi|291485169|dbj|BAI86244.1| GTP pyrophosphokinase [Bacillus subtilis subsp. natto BEST195]
gi|320018562|gb|ADV93548.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis BSn5]
gi|349595564|gb|AEP91751.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str.
RO-NN-1]
gi|351470925|gb|EHA31046.1| GTP pyrophosphokinase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|384932597|gb|AFI29275.1| GTP diphosphokinase [Bacillus sp. JS]
gi|402482094|gb|AFQ58603.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis QB928]
gi|407959953|dbj|BAM53193.1| GTP pyrophosphokinase [Bacillus subtilis BEST7613]
gi|407965596|dbj|BAM58835.1| GTP pyrophosphokinase [Bacillus subtilis BEST7003]
gi|430020414|gb|AGA21020.1| GTP pyrophosphokinase / Guanosine-3',5'-bis(Diphosphate) 3'
pyrophosphohydrolase [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452115584|gb|EME05980.1| GTP pyrophosphokinase [Bacillus subtilis MB73/2]
Length = 734
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|256371735|ref|YP_003109559.1| (p)ppGpp synthetase I SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
gi|256008319|gb|ACU53886.1| (p)ppGpp synthetase I, SpoT/RelA [Acidimicrobium ferrooxidans DSM
10331]
Length = 721
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/330 (45%), Positives = 210/330 (63%), Gaps = 10/330 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V+ A A +AH GQ+R SG+PY++H + A +A + A+ VAA LLHDT++D +S
Sbjct: 16 LVLDALALATKAHHGQLRRSGEPYIVHPLAVARRVAELRADPITVAAALLHDTVEDTSIS 75
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + + FGA VA LV+G +KL +LS ++E +A + M +AMA D R ++I
Sbjct: 76 LEELEQRFGAEVAALVDGATKLDRLSFDSKE------VAQAATMRKMLIAMARDVRVLVI 129
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T+ AL K++R A ET++I+ PLA+RLGI K QLE+ F L+P ++
Sbjct: 130 KLADRLHNMQTIGALGREKQRRIAHETMDIYAPLAHRLGIEEVKWQLEDHAFAVLHPRRY 189
Query: 379 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + EA + + E+L L I V R K ++SI+ KM+ +
Sbjct: 190 AEMEHLVSQRAPEREARLQAVSEQLAAKLAQVGIVAEV-TARPKHVWSIYEKMVLRGKEF 248
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D I+DI G+R+I E DC+ AL V+H LWA +PG+ KDYI PKFN YQSLHT V EG
Sbjct: 249 DAIYDILGVRIITHEERDCWAALGVIHSLWAPIPGRFKDYINAPKFNLYQSLHTTVVLEG 308
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQ+RT+EMHL+AE+G AAHW YKEG
Sbjct: 309 GSPLEVQVRTREMHLRAEYGVAAHWGYKEG 338
>gi|172040623|ref|YP_001800337.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7109]
gi|448823600|ref|YP_007416765.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7111]
gi|171851927|emb|CAQ04903.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7109]
gi|448277097|gb|AGE36521.1| GTP pyrophosphokinase [Corynebacterium urealyticum DSM 7111]
Length = 758
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/431 (38%), Positives = 243/431 (56%), Gaps = 40/431 (9%)
Query: 172 NIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETA 231
N V G L ++F A L + + +A+ AER H G MR SG+PY+ H + A
Sbjct: 27 NPVLGPLIVVHRKFHPKANL-------EVLNRAYNTAERLHDGVMRKSGEPYITHPLAVA 79
Query: 232 MLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAREN 291
+ A IG ++T + A LLHDT++D S + + FG VA LV+GV+KL +++
Sbjct: 80 TIAAEIGMDTTTLVAALLHDTVEDTDYSLEELTTDFGEEVARLVDGVTKLDKVA------ 133
Query: 292 NTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFV 350
EA+ + M +AM+ D R ++IK+ DRLHNM T+ LP K+ + A+ETLE+
Sbjct: 134 --LGSAAEAETVRKMIVAMSHDPRVLVIKVCDRLHNMRTMRFLPPEKQAKKARETLEVIA 191
Query: 351 PLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDK 408
PLA+RLG++T K +LE+L F L P ++ E+ + + + + +++E A++D
Sbjct: 192 PLAHRLGMATVKWELEDLAFAILYPRKYEEIVRIVADRAPKRDQYIARVKDEIESAMQDT 251
Query: 409 NISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAE 468
I+ V+ GR K +SI+ KM+ + DEI D+ G+R++VE DCY A+ VH L+
Sbjct: 252 GINAEVV-GRPKHYWSIYQKMIVRGRDFDEIFDLVGIRILVETVRDCYAAVGAVHALYQP 310
Query: 469 VPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC 528
+PG+ KDYI+ P+F Y+SLHT V G PLE+QIRT EMH AE+G AAHWRYKE
Sbjct: 311 MPGRFKDYISSPRFGVYKSLHTTVLGPDAKPLEIQIRTLEMHRNAEYGIAAHWRYKETRG 370
Query: 529 QHS--SFVLQMVEWARWVLTWQCEA-------------MSKDRSCV--GNGDSIKPPCTF 571
HS S L + W R +L WQ EA +S D V GD+I T
Sbjct: 371 THSGTSEDLDQMAWMRQLLDWQKEAADPNEFLDSLRYDLSTDEIFVFTPKGDAI----TL 426
Query: 572 PSHADDCPFSY 582
P+ A F+Y
Sbjct: 427 PAGATPVDFAY 437
>gi|225874445|ref|YP_002755904.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
gi|225792335|gb|ACO32425.1| GTP pyrophosphokinase [Acidobacterium capsulatum ATCC 51196]
Length = 747
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 223/355 (62%), Gaps = 10/355 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ H+GQ RASG+P++LH +E A++LA + +ST +AAGLLHD ++D +
Sbjct: 40 DIIRRAWDFCLEHHQGQFRASGEPFVLHPLEVALVLAEMKLDSTAIAAGLLHDAVEDTPV 99
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I FG VA +VEGV+K+ ++ RE+ +A+ + M LAM D R VL
Sbjct: 100 TAADIANQFGEQVAHIVEGVTKIDKIQFANREDR------QAENVRKMLLAMVTDVRVVL 153
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ L ++Q A+ETL+I+ PLA+RLG+ + +LE+L F++++P
Sbjct: 154 IKLADRLHNMRTLEHLSAERQQAIARETLDIYAPLAHRLGMGKLRGELEDLSFRYVDPYS 213
Query: 378 HTELSSKLVECFDEA-MVTSAIEKLE-QALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + E E + +E L + LK+ I+ V R K L+SIH K+ K + +
Sbjct: 214 YDQLQLAVEERRSEGEQFLAGVEALLLEKLKENKITARVQW-RIKRLFSIHSKLQKSRSS 272
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+++D+ LR+I + DCY L ++H +W VPG++KD+I P+ N YQSLHT V GE
Sbjct: 273 VDQLYDLLALRVITNSVPDCYAVLGLIHSIWRPVPGRIKDFIAMPRPNMYQSLHTTVMGE 332
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
G EVQIRT+EMH AE G AAHW+YK G+ S+ Q + W R ++ WQ E
Sbjct: 333 GGHQFEVQIRTEEMHRVAEEGIAAHWKYKAGNSPISARDEQRLAWVRQLVEWQRE 387
>gi|86158972|ref|YP_465757.1| (p)ppGpp synthetase I SpoT/RelA [Anaeromyxobacter dehalogenans
2CP-C]
gi|85775483|gb|ABC82320.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 746
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 156/362 (43%), Positives = 217/362 (59%), Gaps = 27/362 (7%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +LA + + + V GLLHDT++D
Sbjct: 42 DLIKKAYVYSAKVHQGQIRKSGEPYLVHPLEVAGILAELKLDESSVVTGLLHDTIEDTLA 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE---ADRLHTMFLAMA-DAR 314
+ I FG +ADLV+GV+KLSQ TA+ T E A+ M +AMA D R
Sbjct: 102 TKKEISELFGLEIADLVDGVTKLSQF--------TAANTQEEKQAENFRKMVVAMAKDIR 153
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
+L+KLADR HNM TLDA+ ++R A+ETL+I+ PLANRLGI K +LE L FK+L
Sbjct: 154 VLLVKLADRTHNMRTLDAMKPESQERIARETLDIYAPLANRLGIQWIKTELEELSFKYLR 213
Query: 375 PDQHTELSSKL-VECFD-EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P ++EL+ K+ V + E V +E + + L + + V GR K +YSI+ KM +
Sbjct: 214 PADYSELNEKVSVRAREKERFVAEVVEIIRRRLAEAGMKADV-SGRVKHVYSIYRKMRQL 272
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ ++I D+ G R+IV+ +CY++L VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 273 DVDFEQIQDVIGFRVIVDTVAECYESLGFVHSLWKPVPGRFKDYIAIPKPNLYQSLHTTV 332
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE------------GDCQHSSFVLQMVEW 540
G +EVQIRT+EMH AE G AAHW YKE D ++ Q+VE+
Sbjct: 333 VGPAGERIEVQIRTREMHRIAEEGVAAHWAYKEKGRDGKGAELSRKDAASFGWLRQLVEF 392
Query: 541 AR 542
R
Sbjct: 393 QR 394
>gi|336421845|ref|ZP_08602000.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
gi|336009694|gb|EGN39685.1| hypothetical protein HMPREF0993_01377 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 781
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 230/360 (63%), Gaps = 13/360 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A++AH GQ R SG+PY++H + A++LA + + + +G+LHD ++D +S +
Sbjct: 69 KAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILADLEMDKETIVSGMLHDVVEDTEVSEED 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 129 IKREFGEEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 183
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL+ + K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 184 DRLHNMRTLEFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDL 243
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ + E V ++++ +K+ +I V GR K +SI+ KM+ + T+D++
Sbjct: 244 VNQINARKTEREEFVQQIVDEVSTHMKNASIKADV-NGRVKHFFSIYKKMVNQDKTVDQV 302
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P
Sbjct: 303 YDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP 362
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 556
E+QIRT+EMH AE+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|161507422|ref|YP_001577376.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
gi|160348411|gb|ABX27085.1| ppGpp synthetase [Lactobacillus helveticus DPC 4571]
Length = 746
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/335 (43%), Positives = 206/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG GVA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEGVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++ A ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWIASETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|383821694|ref|ZP_09976930.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
gi|383332543|gb|EID11019.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium phlei RIVM601174]
Length = 782
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 148/359 (41%), Positives = 219/359 (61%), Gaps = 19/359 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 76 RAYEVAEERHANQLRKSGDPYITHPLAVAHILAELGMDTTTLIAALLHDTVEDTGYTLEE 135
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG+ VA LV+GV+KL +++ E + + M +AMA DAR ++IK+A
Sbjct: 136 LTAEFGSEVAHLVDGVTKLDKVA--------LGTAAEGETIRKMIIAMARDARVLVIKVA 187
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+QR A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 188 DRLHNMRTMRFLPPEKQQRKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 247
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ Q L+ I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 248 VRLVADRAPSRDTYLAKVRAEIAQTLQASKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 306
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY AL VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 307 HDLVGVRILCDEIRDCYAALGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 366
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-------HSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT++MH AE G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 367 LEVQIRTRDMHKTAELGIAAHWRYKENKGRNGVPNNPHAAAEIDEMAWMRQLLDWQREA 425
>gi|296331695|ref|ZP_06874164.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675346|ref|YP_003867018.1| GTP pyrophosphokinase RelA/SpoT [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151290|gb|EFG92170.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413590|gb|ADM38709.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 734
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|167746626|ref|ZP_02418753.1| hypothetical protein ANACAC_01337 [Anaerostipes caccae DSM 14662]
gi|167653586|gb|EDR97715.1| RelA/SpoT family protein [Anaerostipes caccae DSM 14662]
Length = 758
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 224/357 (62%), Gaps = 16/357 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +
Sbjct: 46 EMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDV 105
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +L
Sbjct: 106 TYEDVVREFGVEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVIL 160
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD
Sbjct: 161 IKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDV 220
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL L + EA + ++++ ++ I + GR K +SI+ KM+ + T
Sbjct: 221 YKELEHSLDSQKVRREAYIKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKT 279
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 280 LDQIYDLFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGP 339
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + SS + E W R +L WQ
Sbjct: 340 EGHPFEIQIRTFEMHRIAEYGIAAHWKYKE---KSSSVGVNKEEEKLSWLREILEWQ 393
>gi|350266929|ref|YP_004878236.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
gi|349599816|gb|AEP87604.1| RelA/SpoT family protein [Bacillus subtilis subsp. spizizenii
TU-B-10]
Length = 734
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|213966136|ref|ZP_03394323.1| RelA/SpoT family protein [Corynebacterium amycolatum SK46]
gi|213951234|gb|EEB62629.1| RelA/SpoT family protein [Corynebacterium amycolatum SK46]
Length = 753
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/363 (42%), Positives = 223/363 (61%), Gaps = 18/363 (4%)
Query: 197 REDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
R D + +A+ AER H G R SG+PY+ H + A + A IG ++T + A LLHDT++
Sbjct: 41 RADLAVLQRAYDTAERLHDGVYRKSGEPYITHPLAVATIAAEIGMDTTTLVAALLHDTVE 100
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 313
D + + + R FG VA LV+GV+KL +++ EA+ + M +AM+ D
Sbjct: 101 DTDYTLEDLERDFGPEVARLVDGVTKLDKVA--------LGSAAEAETVRKMIIAMSQDP 152
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R ++IK+ADRLHNM T+ LP K+ + A+ETLE+ PLA+RLG+++ K +LE+L F L
Sbjct: 153 RVLVIKVADRLHNMRTMRFLPPEKQAKKARETLEVIAPLAHRLGMASVKWELEDLSFAIL 212
Query: 374 NPDQHTELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
P ++ E+ + + + + E +++ LK+ +I+ V GR K +SI+ KM+
Sbjct: 213 YPKKYDEIVRLVADRAPQRDRYIQEVSEMIQKDLKESHIAAEV-QGRPKHYWSIYQKMIV 271
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+ DEI D+ GLR++V+ +DCY A+ VH L+ +PG+ KDYI+ P+F YQSLHT
Sbjct: 272 RGHEFDEIFDLVGLRVLVDTTKDCYAAMGAVHSLFKPMPGRFKDYISAPRFGVYQSLHTT 331
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQ 548
V G G PLEVQIRT EMH AE+G AAHWRYKE H S+ V QM W R +L WQ
Sbjct: 332 VIGPGGSPLEVQIRTHEMHYNAEYGIAAHWRYKETKGSHKGDSAEVDQMA-WMRQLLDWQ 390
Query: 549 CEA 551
EA
Sbjct: 391 REA 393
>gi|375091649|ref|ZP_09737938.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
gi|374563171|gb|EHR34493.1| RelA/SpoT family protein [Helcococcus kunzii ATCC 51366]
Length = 719
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 219/352 (62%), Gaps = 11/352 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ A+ H+GQ+R SG+ Y++H VE +++L+ + + + AGL+HD L+D
Sbjct: 19 ELITKAYNLAKEKHKGQVRNSGEEYIVHPVEVSIILSTLELDDETICAGLMHDVLEDTDF 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + + FG + LV+GV+KL L +E + + + M LAMA D R ++
Sbjct: 79 TREEMAQEFGDEITALVDGVTKLKNLKYKTKE------ETQIESIRKMVLAMANDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL+ K+ A ETLEI+VPLA+RLGI++ K +LE+LC ++++P
Sbjct: 133 IKLADRLHNMRTLEYKDRDKQISTANETLEIYVPLAHRLGINSIKWELEDLCLRYIDPIS 192
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ ++ + E ++ ++KL LK +I F + GR K +YSI+ KM K+ +
Sbjct: 193 YYSVAQQIDQKRSEREKIIEKLMQKLSDELKKIDIKF-TMTGRPKGIYSIYNKMKKQDTS 251
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D I D+ +R+IV++ CY L +VH LW +PG+ KDYI PK N YQSLHT V GE
Sbjct: 252 IDNIFDLIAIRVIVKDINQCYAVLGIVHNLWKPIPGRFKDYIAMPKPNFYQSLHTTVIGE 311
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTW 547
EVQIRT+EMH AEFG A+HW+YKEG + S+ ++ W R ++ W
Sbjct: 312 KGQIFEVQIRTEEMHKNAEFGIASHWQYKEGKKKVSNLDNRL-NWIRQLIDW 362
>gi|167586479|ref|ZP_02378867.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ubonensis Bu]
Length = 795
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/371 (39%), Positives = 221/371 (59%), Gaps = 17/371 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 71 EYLAPEEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 123
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 124 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 177
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 178 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 237
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 238 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 296
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
++YSI+ KM K+L+ ++ D+YG R++VEN DCY + +H L+ VPGK KDYI P
Sbjct: 297 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVENPLDCYTCIGALHALYKPVPGKFKDYIAIP 356
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 540
K NGYQSLHT + G P+E Q+RT++MH AE G AAHW YK G + + +W
Sbjct: 357 KINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQW 416
Query: 541 ARWVLTWQCEA 551
+ +L Q EA
Sbjct: 417 LKSLLDIQSEA 427
>gi|306490820|gb|ADM94941.1| guanosine polyphosphate pyrophosphohydrolase/synthetases
[uncultured candidate division JS1 bacterium]
Length = 724
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 155/358 (43%), Positives = 228/358 (63%), Gaps = 15/358 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
DF+ KA+ +++AH+ Q R SG PYL H + A +LA + + + AGLLHD ++D +
Sbjct: 27 DFLRKAYIFSQQAHQNQKRYSGQPYLSHPLGVADILADLNMDIITIVAGLLHDVVEDTQV 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I + FGA VA LV GV+KLS++S +E +A+ MFLA+A D R +L
Sbjct: 87 NLEEIEQVFGAEVAMLVNGVTKLSKISFKTKEER------QAENFRKMFLAIAEDIRVIL 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRL+NM TL +P KR + AKETL+I+VP+ANRLG+ K +LE+ +L+P +
Sbjct: 141 IKLADRLNNMRTLKYVPAPKRLKKAKETLDIYVPIANRLGLYRVKWELEDYALLNLDPRK 200
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 434
+ EL+ K+ + A IE++++ + ++ F + + GR K++YSI+ KM ++
Sbjct: 201 YNELARKVAKS--RAEREKYIEEVKKRIVEELQKFGIKARIQGRPKNIYSIYKKMEEQDK 258
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VVT 493
+I+D+ +R+I + DCY +L ++H LW +PG+ KDYI PK N YQSLHT V+T
Sbjct: 259 DFFQIYDLMAIRIICNSITDCYASLGLLHSLWKPMPGRFKDYIAMPKSNMYQSLHTTVIT 318
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQCE 550
EG PLEVQIRT+EMH AE+G AAHW+YKE GD S + + W R +L WQ E
Sbjct: 319 SEG-EPLEVQIRTEEMHRTAEYGIAAHWKYKEKGDFLKDSKFEERLTWLRQILDWQKE 375
>gi|257066403|ref|YP_003152659.1| (p)ppGpp synthetase I SpoT/RelA [Anaerococcus prevotii DSM 20548]
gi|256798283|gb|ACV28938.1| (p)ppGpp synthetase I, SpoT/RelA [Anaerococcus prevotii DSM 20548]
Length = 726
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 11/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ E HRGQ R SG+ Y +H + A L+ + + + AGL+HD L+D +
Sbjct: 26 NLIKKAYDFGEFHHRGQKRNSGEDYFIHPIAVARKLSDMKLDDETICAGLMHDVLEDTPV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG + LV+GV+KL L+ +RE +AD + M +AM+ D R VL
Sbjct: 86 TREEMAEEFGEEITFLVDGVTKLKNLNYTSREEK------QADNIRKMVMAMSNDVRVVL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL+ + K+ + A ETLEI+VPLA+RLGI + K +LE+LCF++ P++
Sbjct: 140 IKLSDRLHNMRTLEYMTRKKQIQIADETLEIYVPLAHRLGIYSLKWELEDLCFRYQEPEK 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL+ + EA + I L +LK +I+F + GR KSLYSI+ KM + +
Sbjct: 200 YYELAEMVNVKRREREAYINEIINTLTNSLKGTSINFEI-SGRPKSLYSINKKMERNGIA 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
DEI+D+ +R+IV+ +CY L VH LW +P ++KDY+ +PK NGY+SLHT V GE
Sbjct: 259 FDEIYDLTAIRVIVDTIAECYAVLGKVHSLWRPIPNRIKDYVGQPKPNGYRSLHTTVFGE 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P EVQIRT++MH + E+G AAHWRYKE + S F M + R ++ WQ E
Sbjct: 319 DSKPFEVQIRTRQMHKECEYGVAAHWRYKENNNTKSDFDDAM-SFLRRIVEWQQEG 373
>gi|443632083|ref|ZP_21116263.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443348198|gb|ELS62255.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 734
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEGAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVEEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>gi|315924148|ref|ZP_07920374.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622550|gb|EFV02505.1| GTP diphosphokinase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 723
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 145/355 (40%), Positives = 216/355 (60%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+++AF A+ AH GQ R SG+ Y++H V A +LA ++ + A L+HD ++D +
Sbjct: 28 MIMRAFQLADEAHEGQKRKSGEEYIIHPVAVAYILAEYKMDTETICAALMHDVIEDTDYT 87
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I F A +ADLVEGV+K+ ++ ++E + +A+ L M +AM+ D R +LI
Sbjct: 88 HKQIATIFNARIADLVEGVTKIGKIEYQSKEES------QAEYLRKMVMAMSRDIRVILI 141
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KL DRLHNM TL+ + K+Q A+ETL+I+ P+ANRLGI K +LE+L K+L+P+ +
Sbjct: 142 KLVDRLHNMRTLEYMNPAKQQEKARETLDIYAPIANRLGIQAIKGELEDLSLKYLDPEGY 201
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L K+ + E V I L+ + + I + GR K YSI+ KM +
Sbjct: 202 YDLVKKVKARKQVREEYVDQVIVILKAKIDETGIPCKIY-GRSKHFYSIYRKMKAQHRQF 260
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ +R+IV++ +DCY L +VH W +PG+ KDYI PK N YQS+HT V G
Sbjct: 261 DEIYDLIAVRVIVDSIKDCYGVLGLVHTEWKPIPGRFKDYIAMPKPNMYQSIHTTVIGPN 320
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC-QHSSFVLQMVEWARWVLTWQCE 550
P EVQIRTKEMH AE+G AAHW+YKEG + ++ + + W R ++ WQ E
Sbjct: 321 GDPFEVQIRTKEMHRVAEYGIAAHWKYKEGKTGEKNAHYEKRIAWIRQIMEWQQE 375
>gi|226323920|ref|ZP_03799438.1| hypothetical protein COPCOM_01697 [Coprococcus comes ATCC 27758]
gi|225207469|gb|EEG89823.1| RelA/SpoT family protein [Coprococcus comes ATCC 27758]
Length = 774
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/361 (41%), Positives = 226/361 (62%), Gaps = 15/361 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA++ A AH+GQ R SG+ Y++H + ++LA + + + AG+LHD ++D ++ +
Sbjct: 62 KAYHIARDAHKGQTRKSGEEYIIHPLWVGIILAQLEMDKETIVAGILHDVVEDTVMTDEE 121
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 320
I + FG VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R ++IKL
Sbjct: 122 IRQEFGDEVALLVDGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIIIKL 175
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM TL + K+ AKET++I+ P+A RLGIS K +L++L K+ P+ +
Sbjct: 176 ADRLHNMRTLQYMRPEKQLEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFND 235
Query: 381 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L ++ + E V ++++ +K+ NI V GR K +SI+ KM+ + T+D+
Sbjct: 236 LVKQINARKTEREEFVQQIVDEVSTHMKNANIDAEV-NGRVKHFFSIYKKMVNQDKTVDQ 294
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D++ +R+IV++ +DCY AL V+H+++ VPG+ KDYI PK N YQSLHT +
Sbjct: 295 IYDLFAVRIIVDSVKDCYAALGVIHEMYTPVPGRFKDYIAMPKANMYQSLHTTLMSSIGQ 354
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKD 555
P E+QIRTKEMH AE+G AAHW+YKE + S + E W R +L WQ + MS +
Sbjct: 355 PFEIQIRTKEMHKTAEYGIAAHWKYKESEDGKKSVEAKEEEKLSWLRQILEWQRD-MSDN 413
Query: 556 R 556
R
Sbjct: 414 R 414
>gi|394989576|ref|ZP_10382409.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
gi|393791076|dbj|GAB72048.1| (p)ppGpp synthetase I SpoT/RelA [Sulfuricella denitrificans skB26]
Length = 729
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 153/351 (43%), Positives = 213/351 (60%), Gaps = 10/351 (2%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A++ ++ AH GQ R SG+PY+ H + A +LA ++ + A LLHD ++D ++ I
Sbjct: 42 AYHLSDSAHAGQFRKSGEPYISHPLAVAEILADWHLDAQTLMAALLHDVVEDTAITKKEI 101
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG VA+LV+GVSKL ++ E T +A+ M LAMA D R +LIK+AD
Sbjct: 102 AERFGKAVAELVDGVSKLDKI-----EFQTEIHA-QAENFRKMLLAMARDVRVILIKIAD 155
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM TL A+ KRQR A ETLEI+ P+ANRLG+++ +LE+L F HL P++ L+
Sbjct: 156 RLHNMRTLGAMAPEKRQRIANETLEIYAPIANRLGLNSVYDELEDLSFHHLYPNRFEVLA 215
Query: 383 S--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
K +V +E +EQ LKD I + GR K LYSI+ KM K LT E+
Sbjct: 216 KAVKAARGNRREVVGKVLEAIEQKLKDCQIE-ATITGREKHLYSIYKKMQGKSLTFSEVF 274
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
DIYG R+IV++ CY L +HQL+ +PGK KDYI PK NGYQSLHT + G P+
Sbjct: 275 DIYGFRVIVKDVPTCYLTLGSLHQLYKPIPGKFKDYIAIPKANGYQSLHTTLFGPFGTPI 334
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
E+QIR+++MH AE G A+HW YK GD + + + +W + +L Q E+
Sbjct: 335 EIQIRSQDMHKIAEAGVASHWLYKSGDTEINEMQQKTHQWLQSLLEIQSES 385
>gi|258405012|ref|YP_003197754.1| (p)ppGpp synthetase I SpoT/RelA [Desulfohalobium retbaense DSM
5692]
gi|257797239|gb|ACV68176.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfohalobium retbaense DSM
5692]
Length = 733
Score = 276 bits (707), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 219/355 (61%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ + AH GQ R SG+PYL H +E A +LA + ++ +AAGLLHDTL+D +
Sbjct: 22 LIQKAYVFSASAHAGQRRLSGEPYLSHPLEVAHILAELRLDAPTIAAGLLHDTLEDTQSN 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG VA +VEGV+K+ ++ T+ + +A+ + M LAMA D R +++
Sbjct: 82 VSDLEEQFGEEVAQIVEGVTKIGKV------RFTSKEEAQAENIRKMILAMAEDIRVIIV 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL K++ ++ET+EI+ PLANRLG+ KVQLE++ F++L PD +
Sbjct: 136 KLADRLHNMRTLQHQKGIKQRLISQETMEIYAPLANRLGLYRVKVQLEDISFQYLRPDVY 195
Query: 379 TELSSKLVECFDEAMVTSAIEK---LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++ S + + + + IE+ L Q++ D+N + GR K LYSI KM ++ L+
Sbjct: 196 YQIKSGVEQ--HQTLGQQYIERVTGLIQSILDENSIPGRVSGRQKHLYSIFHKMQRQGLS 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D++HD+ R+I+++ DCY L ++H +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 254 LDQVHDLVAFRVILKSVRDCYAVLGLIHSIWKPVPGRFKDYISMPKANMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+E+QIRT+EMH E+G AAHW+YK+G S W R +L WQ E
Sbjct: 314 DGERIEIQIRTEEMHEINEYGIAAHWKYKDG-SNLSERDADRFRWLRQILDWQKE 367
>gi|317471454|ref|ZP_07930806.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
gi|316901069|gb|EFV23031.1| RelA/SpoT family protein [Anaerostipes sp. 3_2_56FAA]
Length = 904
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/357 (41%), Positives = 224/357 (62%), Gaps = 16/357 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A AH+ Q R SG+PY++H + A++LA + + + AGLLHD ++D +
Sbjct: 192 EMVSRAYDMAFEAHKDQKRKSGEPYIIHPICVAIILAELELDRETIIAGLLHDVVEDTDV 251
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +L
Sbjct: 252 TYEDVVREFGVEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVIL 306
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD
Sbjct: 307 IKLADRLHNMRTMQFMKPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLSLRYLKPDV 366
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ EL L + EA + ++++ ++ I + GR K +SI+ KM+ + T
Sbjct: 367 YKELEHSLDSQKVRREAYIKEIVDEVSGHIERSGIKAEI-DGRVKHFFSIYKKMVNQNKT 425
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 426 LDQIYDLFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGP 485
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + SS + E W R +L WQ
Sbjct: 486 EGHPFEIQIRTFEMHRIAEYGIAAHWKYKE---KSSSVGVNKEEEKLSWLREILEWQ 539
>gi|433449313|ref|ZP_20412177.1| GTP pyrophosphokinase [Weissella ceti NC36]
gi|429538827|gb|ELA06865.1| GTP pyrophosphokinase [Weissella ceti NC36]
Length = 741
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 210/330 (63%), Gaps = 9/330 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ AE H QMR SG+PY++H ++ A +LA + + V AG LHD ++D +
Sbjct: 28 VDKAYAFAENLHHDQMRQSGEPYIMHPIQVAGILADLNMDPDTVVAGYLHDVIEDTDATL 87
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FGA VA +V+GVSKLS++ +S+ A+ + LAM+ D R +++K
Sbjct: 88 EELTELFGANVAIIVDGVSKLSKIEY------KSSREQLAENHRKLLLAMSKDIRVIIVK 141
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TLDAL K++R A ETLEI+ PLA+RLGI T K +LE+L ++L+PD +
Sbjct: 142 LADRLHNMRTLDALKPEKQRRIASETLEIYAPLADRLGIMTIKWELEDLSLRYLDPDAYH 201
Query: 380 ELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+++ K+ E + V A++++E + N+ + GR K +YS++ KM+ K +
Sbjct: 202 DIAKKMKMRRQERLNFVEEAVDEIENIISSLNLEHTDVYGRPKHIYSVYRKMVDKHKDFE 261
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I D+ +R++V++ + Y L ++H W +PG+ KDYI PK NGYQSLHT V G G
Sbjct: 262 DIFDLSAIRVVVDSMPETYAVLGMIHSKWTPMPGRFKDYIALPKNNGYQSLHTTVVGPGG 321
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
P+EVQIRT EMH AEFG AAHW YKEG+
Sbjct: 322 RPMEVQIRTHEMHEVAEFGVAAHWAYKEGN 351
>gi|296393867|ref|YP_003658751.1| (p)ppGpp synthetase I [Segniliparus rotundus DSM 44985]
gi|296181014|gb|ADG97920.1| (p)ppGpp synthetase I, SpoT/RelA [Segniliparus rotundus DSM 44985]
Length = 797
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 220/358 (61%), Gaps = 16/358 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A+ H GQ R SGDPY+ H + A +LA +G ++ + A LLHDT++D S
Sbjct: 92 LLAKAYDIAQARHEGQFRRSGDPYITHPLAVAHILAELGMDTLSLVAALLHDTVEDTGYS 151
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R FG+ VA +V+GV+KL ++ T EA+ + M +AMA D R ++I
Sbjct: 152 LEELERDFGSDVAHIVDGVTKLDKV--------TWGAGAEAETIRKMVIAMARDPRVLVI 203
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ +P K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++
Sbjct: 204 KVADRLHNMRTMRFMPPEKQVRKAQETLEVIAPLAHRLGMASVKWELEDLAFAVLHPKKY 263
Query: 379 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLT 435
E+ +LV + T + +++ L+ SF V + GR K +SI+ KM+ K
Sbjct: 264 AEIV-RLVADRAPSRDTY-LARVKSELQSALSSFRVDAEVAGRPKHYWSIYQKMIVKGRD 321
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHD+ GLR++ DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT V G
Sbjct: 322 FDDIHDLVGLRIVCGEVRDCYAAVGVVHSLWQPLPGRFKDYIAQPRYGVYQSLHTTVIGP 381
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT+EMH AEFG AAHWRYKE G + + + W R +L WQ EA
Sbjct: 382 EGKPLEVQLRTQEMHRVAEFGIAAHWRYKENKGKVGSDAAEVDRMAWMRQLLDWQREA 439
>gi|427723832|ref|YP_007071109.1| (p)ppGpp synthetase I SpoT/RelA [Leptolyngbya sp. PCC 7376]
gi|427355552|gb|AFY38275.1| (p)ppGpp synthetase I, SpoT/RelA [Leptolyngbya sp. PCC 7376]
Length = 749
Score = 276 bits (706), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/380 (43%), Positives = 226/380 (59%), Gaps = 14/380 (3%)
Query: 178 LETYAKEFLANAQLKH-KIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 236
L ++ K++L ++ + + KAF A H GQ R SG PY+ H V A LL
Sbjct: 16 LPSWLKDYLYGGGVQEISVGDRQLICKAFRFAHELHEGQERKSGRPYIEHPVAVAGLLRD 75
Query: 237 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 296
+G NS ++AAG LHD ++D ++ + I FG V LVEGV+KL++ + +SK
Sbjct: 76 LGGNSAMIAAGFLHDVVEDTDVTPEEIEEHFGEEVRQLVEGVTKLTKFT-------FSSK 128
Query: 297 T-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLAN 354
T +A+ MFL+MA D R +++KLADRLHNM TL+ L K++R A ET EIF PLAN
Sbjct: 129 TERQAENFRRMFLSMAEDIRVIVVKLADRLHNMRTLEPLRPDKQKRIALETKEIFAPLAN 188
Query: 355 RLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISF 412
RLGI +K +LE+LCFK+L + + + E EA V AI+ + L +
Sbjct: 189 RLGIWRFKWELEDLCFKYLESEAFRAMQDHISEKRAEREARVNEAIDIVRDRLHKLKLHV 248
Query: 413 LVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGK 472
+ GR K LYSI+ KM ++ DEI DI G+R+IVE+ ++CY+AL V+H + +PG+
Sbjct: 249 WEIKGRPKHLYSIYDKMQRQHKEFDEIFDISGIRVIVESTDECYRALAVIHDAFKPIPGR 308
Query: 473 MKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
KDYI PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW+YKE ++S
Sbjct: 309 FKDYIGLPKPNRYQSLHTTVVGLNGRPLEVQIRTMEMHHIAEYGIAAHWKYKEVGHSNAS 368
Query: 533 F--VLQMVEWARWVLTWQCE 550
+ W R +L WQ +
Sbjct: 369 ISSTDEKFTWLRQLLEWQSD 388
>gi|291301292|ref|YP_003512570.1| (p)ppGpp synthetase I SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
gi|290570512|gb|ADD43477.1| (p)ppGpp synthetase I, SpoT/RelA [Stackebrandtia nassauensis DSM
44728]
Length = 787
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/359 (42%), Positives = 216/359 (60%), Gaps = 23/359 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 77 RAYATAERLHEGQFRKSGDPYITHPLAVASILAELGMDTTSLVAALLHDTVEDTDYTLEA 136
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KL ++ KL +A+ + M +AMA D R ++IKLA
Sbjct: 137 ITEDFGGEVALLVDGVTKLDKV-KLG-------DAAKAETIRKMVVAMAKDPRVLVIKLA 188
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP K+++ A ETLEI PLA+RLG++T K +LE+L F L ++ E+
Sbjct: 189 DRLHNMRTLTFLPAAKQEQKAHETLEILAPLAHRLGMNTIKWELEDLSFATLYRKRYAEI 248
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E E ++ +++ L++ I V GR K LYSI+ KM+ + +I
Sbjct: 249 GRLVAEHTPQREMLLAQVTDRVNADLREARIKATV-SGRPKHLYSIYQKMIVRGRDFSDI 307
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V +E DCY AL V+H W VPG+ KD+I PKFN YQSLHT V G P
Sbjct: 308 YDLVGIRILVNSERDCYAALGVIHANWQPVPGRFKDFIAMPKFNMYQSLHTTVIGPTGKP 367
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT MH AE+G AAHW+YKE G H + + W R +L WQ EA
Sbjct: 368 VEMQIRTWAMHRTAEYGIAAHWKYKETKGATIAGPPAH----IDEMAWLRQLLDWQREA 422
>gi|323485946|ref|ZP_08091279.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323693057|ref|ZP_08107277.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|355621474|ref|ZP_09046124.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
gi|323400736|gb|EGA93101.1| hypothetical protein HMPREF9474_03030 [Clostridium symbiosum
WAL-14163]
gi|323502938|gb|EGB18780.1| hypothetical protein HMPREF9475_02140 [Clostridium symbiosum
WAL-14673]
gi|354823569|gb|EHF07899.1| hypothetical protein HMPREF1020_00203 [Clostridium sp. 7_3_54FAA]
Length = 761
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/375 (40%), Positives = 229/375 (61%), Gaps = 11/375 (2%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E +E +A + H V KA+ A AH+ Q R SG+PY++H + A++LA +
Sbjct: 24 EKLYQELIAGIRKYHPSDDITMVEKAYDIAYNAHKEQKRRSGEPYIIHPLCVAIILADLE 83
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
+ + AG+LHD ++D ++ + + FG VA LV+GV+KL+Q+S + +
Sbjct: 84 LDKETIVAGILHDVVEDTVMTEEELTSIFGEEVALLVDGVTKLTQISW-----SMDKVEI 138
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
+A+ L MFLAMA D R +LIKLADRLHNM TL + K++ A+ET++I+ P+A+RLG
Sbjct: 139 QAENLRKMFLAMAKDIRVILIKLADRLHNMRTLQYMKPEKQKEKARETMDIYAPIADRLG 198
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 415
IS K +L++L K+L P+ + EL+ K+ D EA V + +++ ++D I V
Sbjct: 199 ISKIKTELDDLSLKYLEPEVYYELAEKVALRKDAREAFVQGIVFEVKSHMEDAGIEAKV- 257
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ + T+++I+D++ +R++VE +DCY AL V+H+L+ +PG+ KD
Sbjct: 258 DGRVKHFFSIYKKMVNQDKTLEQIYDLFAVRIVVETVKDCYAALGVIHELYKPIPGRFKD 317
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF-- 533
YI PK N YQSLHT + P E+QIRT EMH AE+G AAHW+YKE S+
Sbjct: 318 YIAMPKPNMYQSLHTTLISSSGQPFEIQIRTFEMHRTAEYGIAAHWKYKESGSSKSATDS 377
Query: 534 VLQMVEWARWVLTWQ 548
+ W R +L WQ
Sbjct: 378 AEAKLSWLRQILEWQ 392
>gi|433455625|ref|ZP_20413702.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter crystallopoietes
BAB-32]
gi|432197381|gb|ELK53766.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter crystallopoietes
BAB-32]
Length = 738
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 217/362 (59%), Gaps = 20/362 (5%)
Query: 197 REDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
REDF + +AF AER+HRGQ R SGDPY+ H V A +LA +G T +AA LLHDT++
Sbjct: 32 REDFDLIHRAFVIAERSHRGQKRKSGDPYITHPVAVATILAELGMTGTTLAAALLHDTVE 91
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 313
D + D + FG VA LV+GV+KL ++ +++ + M +AMA D
Sbjct: 92 DTEYTLDQLRSEFGPEVAMLVDGVTKLDKVQ--------FGDAAQSETVRKMVVAMAKDI 143
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R ++IKLADRLHN T + + A+ETLEIF PLA+RLG++T K +LE+L F L
Sbjct: 144 RVLVIKLADRLHNARTWRFVSPESSAKKARETLEIFAPLAHRLGMNTIKWELEDLSFAAL 203
Query: 374 NPDQHTELSSKLVECFDE-----AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 428
+P + E+ + + E M+ + I +A+K K + GR K YSI+ K
Sbjct: 204 HPKVYEEIVRMVGDRTPEREKYLTMLRTKIGDDLRAVKIKA----TITGRPKHYYSIYQK 259
Query: 429 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 488
M+ + D+IHD+ G+R++VE+ DCY AL +H W +PG+ KDYI PKFN YQSL
Sbjct: 260 MIVRGKDFDDIHDLMGIRVLVESVRDCYAALGALHSRWNPLPGRFKDYIAMPKFNMYQSL 319
Query: 489 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
HT V G G P+E+QIRT EMH +AE+G AAHW+YK+ ++ + W R ++ WQ
Sbjct: 320 HTTVIGPGGKPVEIQIRTYEMHRRAEYGVAAHWKYKDAAKSGTAADSGDMGWLRSLVDWQ 379
Query: 549 CE 550
E
Sbjct: 380 QE 381
>gi|386358955|ref|YP_006057201.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365809462|gb|AEW97678.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 776
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 219/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 62 RAFQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 121
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 122 LRRDFGEQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 173
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 174 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 233
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 234 VRLVAERAPKRDEYLAVVT---DQVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 289
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 290 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 349
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 350 GKPVELQIRTFDMHRRAEYGIAAHWKYKQDAVAGASKVRTDGPKSAKADDAVNDMAWLRQ 409
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 410 LLDWQKE 416
>gi|365157987|ref|ZP_09354230.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
gi|363622166|gb|EHL73337.1| GTP pyrophosphokinase [Bacillus smithii 7_3_47FAA]
Length = 730
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ AE AH+ Q R SG+PY++H V+ A +LA + + VAAG LHD ++D ++
Sbjct: 27 LVYKAYRVAEEAHKHQYRKSGEPYIMHPVQVAGILADLEMDPATVAAGFLHDVVEDTEMT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R F +A LV+GV+KL ++ + E +A+ MFLAMA D R +LI
Sbjct: 87 LEDLKREFNEEIAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFLAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPAEKQRRIANETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV-LCGRHKSLYSIHCKMLKKKLTMD 437
+ + + E E + K +S + GR K +YSI+ KM+ K +
Sbjct: 201 YRIVNLMKRKRAEREEYLEEVVEEVRERLKEVSIEAEISGRPKHIYSIYRKMVIKNKQFN 260
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 261 EIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKG 320
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHW YKEG ++SSF ++ W R +L +Q E+
Sbjct: 321 DPLEVQIRTFDMHRIAEYGVAAHWAYKEGKTLDENSSFEKKL-SWFREILEFQKES 375
>gi|154482685|ref|ZP_02025133.1| hypothetical protein EUBVEN_00361 [Eubacterium ventriosum ATCC
27560]
gi|149736461|gb|EDM52347.1| RelA/SpoT family protein [Eubacterium ventriosum ATCC 27560]
Length = 759
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/350 (41%), Positives = 221/350 (63%), Gaps = 11/350 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+++H Q R SG+PY++H + TA++LA + + + AGLLHD ++D ++ +
Sbjct: 52 KAYNFAKKSHGDQKRKSGEPYIIHPIHTALILADLELDKESIMAGLLHDVMEDTKVTREQ 111
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V DLV+GV+KL+ KL + + K +A+ L MFLAMA D R +LIKLA
Sbjct: 112 MISEFGEEVTDLVDGVTKLT---KLDYDADKVEK--QAENLRKMFLAMAKDIRVILIKLA 166
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K++ +KET+EI+ P+A+RLGIS K++L++L ++L P+++ +L
Sbjct: 167 DRLHNMRTLQYMTPEKQKEKSKETMEIYAPIADRLGISKIKIELDDLALRYLEPEKYKDL 226
Query: 382 SSKL---VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+ +E +E M + I ++ ++ I + GR K +SI+ KM+ + T+D+
Sbjct: 227 VDGVHLRLEHREEFM-SQLIAEVAGYIEKAGIK-ATIDGRVKHYFSIYKKMVNQHKTLDQ 284
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D++ +R+IV+ +CY AL V+H+ + VPG+ KDYI PK N YQSLHT + G
Sbjct: 285 IYDVFAIRIIVDTVMECYGALGVIHEKYTPVPGRFKDYIAMPKQNMYQSLHTTLIGPNGQ 344
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE Q + W R +L WQ
Sbjct: 345 PFEIQIRTMEMHKTAEYGIAAHWKYKENITGEGDNEEQKISWLRQILEWQ 394
>gi|86740082|ref|YP_480482.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
gi|86566944|gb|ABD10753.1| (p)ppGpp synthetase I [Frankia sp. CcI3]
Length = 862
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/399 (38%), Positives = 229/399 (57%), Gaps = 40/399 (10%)
Query: 171 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 230
D ++ G L + + +A Q +AF A+ AH GQ+R SG PY+ H +
Sbjct: 126 DPVLRGLLANHPRADIAQVQ------------QAFEVADAAHAGQVRFSGHPYITHPIAV 173
Query: 231 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 290
A +LA +G ++ ++A LLHDTL++ L+ D I TFG +A +V+ VSKL+++
Sbjct: 174 ASILADLGMDTATLSAALLHDTLEETTLTVDAIRDTFGDHIALIVDAVSKLNRVK----- 228
Query: 291 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 349
+ +A+ + M +AMA D RA+++KLADRLHNM TL LP K++R A+ETLE++
Sbjct: 229 ---VGEAAQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARETLEVY 285
Query: 350 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKD 407
PLA+RLG+++ K +LE+L F L P ++ E+ + + + + I +++ L+D
Sbjct: 286 APLAHRLGMNSLKWELEDLSFAALYPKRYDEIVRLVADRAPSRDVYLAEVIGQVQVGLRD 345
Query: 408 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 467
I V+ GR K YSI+ KM+ + + D+I+D+ G+R++V++ DCY L VH W
Sbjct: 346 ARIK-AVVSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSVRDCYATLGTVHATWK 404
Query: 468 EVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
+PG+ KDYI PKFN YQSLHT V G P+E+QIRT MH +AE+G AAHW+YKE
Sbjct: 405 PIPGRFKDYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHNRAEYGIAAHWKYKEDG 464
Query: 528 CQHSSFV----------------LQMVEWARWVLTWQCE 550
++ W R VL WQ E
Sbjct: 465 VAARPSAGTPEGGRAGRRKGGPDADLMTWLRQVLDWQRE 503
>gi|134298601|ref|YP_001112097.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum reducens MI-1]
gi|134051301|gb|ABO49272.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum reducens MI-1]
Length = 721
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHRGQ R SG+ Y++H + A++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDVQTVAAGLLHDVVEDTGIT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I + F +A +V+GV+KL +L +E +A+ L MFLAMA D R +LI
Sbjct: 82 LEDIEKNFSLEIATMVDGVTKLGKLQFQTKEER------QAENLRKMFLAMAKDIRVILI 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL K++ A+ETL F P+A+RLGI K +LE+L F++L P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLHFFTPMAHRLGIYKIKWELEDLSFRYLEPEQY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ ++ + E + I++L L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QRMKVQIAKSRAKREEYIQEVIKELAAKLSAVNIKSEI-QGRPKNLYSIYQKMVEQQKEL 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I D+ +R++V + +DCY +L + H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 KDIFDVQAVRVLVNSVKDCYGSLGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPH 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT +MH AE+G AAHWRYKEG + F ++ W R +L Q EA
Sbjct: 315 GEPVEIQIRTWDMHKVAEYGIAAHWRYKEGSQEEKDFDKKLA-WIRQMLDAQHEA 368
>gi|418412040|ref|ZP_12985305.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
gi|410890054|gb|EKS37854.1| GTP pyrophosphokinase [Staphylococcus epidermidis BVS058A4]
Length = 729
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 219/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K+E + + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIENEMTNMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|408533281|emb|CCK31455.1| GTP pyrophosphokinase [Streptomyces davawensis JCM 4913]
Length = 847
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 156/368 (42%), Positives = 218/368 (59%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 130 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 189
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 190 LRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 241
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 242 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 301
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 302 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 357
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 358 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 417
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R
Sbjct: 418 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKAGKGKDDHLNDMAWLR 477
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 478 QLLDWQKE 485
>gi|294501369|ref|YP_003565069.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|295706716|ref|YP_003599791.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
gi|294351306|gb|ADE71635.1| GTP pyrophosphokinase [Bacillus megaterium QM B1551]
gi|294804375|gb|ADF41441.1| GTP pyrophosphokinase [Bacillus megaterium DSM 319]
Length = 732
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 221/356 (62%), Gaps = 12/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH+ Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGFLHDVVEDTEIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LKDLEKAFNEEVAMLVDGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + + + +I + + GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAEREQYLAEVIDEVREQVDEVSIK-VEISGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHW YKEG +H+SF ++ W R +L +Q +A
Sbjct: 320 GDPLEVQIRTFDMHQIAEYGIAAHWAYKEGKTAEHASFEEKLT-WFREILEFQNDA 374
>gi|384044791|ref|YP_005492808.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
gi|345442482|gb|AEN87499.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(PpGpp
synthetase I) ((P)ppGpp synthetase) [Bacillus megaterium
WSH-002]
Length = 732
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 221/356 (62%), Gaps = 12/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AH+ Q R SG+PY++H ++ A +L + + +AAG LHD ++D ++
Sbjct: 27 FVQKAYDFAKEAHKEQYRKSGEPYIIHPIQVAGILVDLDMDPATIAAGFLHDVVEDTEIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LKDLEKAFNEEVAMLVDGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + I+++ + + + +I + + GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAEREQYLAEVIDEVREQVDEVSIK-VEISGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKQNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT +MH AE+G AAHW YKEG +H+SF ++ W R +L +Q +A
Sbjct: 320 GDPLEVQIRTFDMHQIAEYGIAAHWAYKEGKTAEHASFEEKLT-WFREILEFQNDA 374
>gi|422502180|ref|ZP_16578425.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
gi|315084168|gb|EFT56144.1| GTP diphosphokinase [Propionibacterium acnes HL027PA2]
Length = 774
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 213/356 (59%), Gaps = 22/356 (6%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE HRGQ R SGDPY+ H + M+LA +G + + AGLLHDT++D +
Sbjct: 71 IIERAYRTAEHYHRGQSRKSGDPYITHPLAVTMILAELGMDERTLCAGLLHDTVEDTSYT 130
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG +A LV+GV+KL ++ + +A+ + M +AM+ D R ++I
Sbjct: 131 NEQLTADFGEEIALLVDGVTKLDKVQ--------YGDSAKAETIRKMVIAMSRDIRVLVI 182
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K+ R AKETLEIF PLA+RLG++ K +LE+LCF LNP +
Sbjct: 183 KLADRLHNMRTLGFLRPDKQNRIAKETLEIFAPLAHRLGMNAIKWELEDLCFSTLNPKLY 242
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E EA + I + Q L + I +V GR K YSI+ KM+ +
Sbjct: 243 DEIVHMVAERAPQREAQLKDVITIVRQDLDEAGIKAIVY-GRPKHYYSIYQKMVVRGRDF 301
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ GLR++V+ DCY AL V+H W +PG+ K YI PK+N YQSLHT V G G
Sbjct: 302 SDIYDLTGLRILVDTPRDCYAALGVMHVRWNPLPGRFKYYIAMPKYNMYQSLHTTVLGPG 361
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----------DCQHSSFVLQMVEWAR 542
P+E+QIRT EMH +AE+G AAHW+YKE D S+V + +W++
Sbjct: 362 GQPVELQIRTHEMHRRAEYGVAAHWKYKENPNAVGRGIQPDGTDLSWVQSLNQWSK 417
>gi|403386962|ref|ZP_10929019.1| GTP pyrophosphokinase [Clostridium sp. JC122]
Length = 725
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 222/354 (62%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KAF + AH+ Q R SG+PY++H +E A +LA +G +++ + AGLLHD ++D +Y
Sbjct: 21 VRKAFELSFEAHKEQKRESGEPYIIHPLEVACILAELGLDTSTIVAGLLHDVIEDTDYTY 80
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I + F VADLV+GVSKL ++ +E +AD + M LAMA D R +LIK
Sbjct: 81 EDICQMFSVEVADLVQGVSKLGKIKYKTKEEQ------QADNVRKMLLAMAKDIRVILIK 134
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN+ TL K++ AKETL+I+ PLA+RLGIS K +LE+L ++L+ ++
Sbjct: 135 LADRLHNLRTLKFKKEAKQKEKAKETLDIYAPLAHRLGISKIKWELEDLSLRYLHEKEYY 194
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
EL ++ + E + + I+ L+ L I + GR K YSI+ KM+KK T+D
Sbjct: 195 ELVKEISQKRAEREVQIENIIKNLQDNLDKVGIKSEI-EGRPKHFYSIYRKMVKKNKTID 253
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I D+ +R++V++ DCY AL +VH ++ +PG+ KDYI PK N YQS+HT V G
Sbjct: 254 QIFDLTAVRVLVDDIGDCYAALGIVHTIYKPIPGRFKDYIAMPKPNMYQSIHTTVIGPFG 313
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AE+G AAHW+YKEG ++ + + W R +L WQ E
Sbjct: 314 KPVEIQIRTYEMHRIAEYGIAAHWKYKEGISNNNDSLESRLSWLREMLEWQGET 367
>gi|418326147|ref|ZP_12937339.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
gi|365226304|gb|EHM67523.1| GTP diphosphokinase [Staphylococcus epidermidis VCU071]
Length = 729
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 219/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSKSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K+E + + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIENEMTNMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|417647325|ref|ZP_12297167.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
gi|329724679|gb|EGG61185.1| GTP diphosphokinase [Staphylococcus epidermidis VCU144]
Length = 729
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 143/348 (41%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K++Y A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYYIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|426403554|ref|YP_007022525.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860222|gb|AFY01258.1| GTP pyrophosphokinase [Bdellovibrio bacteriovorus str. Tiberius]
Length = 738
Score = 276 bits (706), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 219/379 (57%), Gaps = 27/379 (7%)
Query: 185 FLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVV 244
+ NA LK + KA+ +E+ H GQ+R SG+PY+ H + A +LA + +
Sbjct: 28 YYPNADLK-------IIEKAYSFSEKMHEGQIRRSGEPYISHPLSVAAILADFHLDLDTI 80
Query: 245 AAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLH 304
A GLLHDT++D + + I FG +A LV+GV+K+ Q+ + N+ K + + +
Sbjct: 81 ATGLLHDTVEDTAATLEDIRTEFGDVIAHLVDGVTKIGQM----KFKNSHEK--QGENIR 134
Query: 305 TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKV 363
M +AM D R VL+KLADRLHNM TL+ +P K++R A ETLEI+ PLA R+GIS K+
Sbjct: 135 KMIVAMGKDVRVVLVKLADRLHNMRTLNFMPFEKQERIALETLEIYCPLAGRMGISALKI 194
Query: 364 QLENLCFKHLNPDQHTELSSKLVEC-------FDEAMVTSAIEKLEQALKDKNISFLVLC 416
+LE+LCF++ PD + EL ++ + DE V E L + V
Sbjct: 195 ELEDLCFRYYRPDMYYELVQQIKKTESEQNRYIDEVKVLIGKE-----LNKAGFRYEVY- 248
Query: 417 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 476
GR K L+SI+ KM + + D+++D+ R++VE+ +CY AL +VH LW +PG+ KD+
Sbjct: 249 GRSKHLWSIYRKMQSRNIDYDQVYDVLAFRVLVESVAECYAALGLVHSLWKPIPGRFKDF 308
Query: 477 ITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ 536
I PK N YQSLHT V G G +E+QIRT EMHL AE G AAHW+YKE LQ
Sbjct: 309 IAMPKANNYQSLHTTVMGPGGERIEIQIRTSEMHLVAEKGIAAHWKYKERGKMVDDSDLQ 368
Query: 537 MVEWARWVLTWQCEAMSKD 555
W R +++W + D
Sbjct: 369 QANWLRDLVSWHQNVRNPD 387
>gi|229492002|ref|ZP_04385819.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|453071000|ref|ZP_21974227.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
gi|229321134|gb|EEN86938.1| RelA/SpoT family protein [Rhodococcus erythropolis SK121]
gi|452760083|gb|EME18426.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus qingshengii BKS
20-40]
Length = 803
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 102 RAYDVAEDRHSSQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEE 161
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 162 LTKDFGDEVAHLVDGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVA 213
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 214 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 273
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ +V GR K +SI+ KM+ K D+I
Sbjct: 274 VRLVADRAPSRDTYLAKVRAEINSTLSASRINAIV-EGRPKHYWSIYQKMIVKGRDFDDI 332
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 333 HDLVGVRILCEEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 392
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +H+ + ++ + W R +L WQ EA
Sbjct: 393 LEVQIRTQDMHRTAEFGIAAHWRYKETKGKHAGDIAEVDDMAWMRQLLDWQREA 446
>gi|319651680|ref|ZP_08005807.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
gi|317396747|gb|EFV77458.1| GTP pyrophosphokinase [Bacillus sp. 2_A_57_CT2]
Length = 744
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 158/375 (42%), Positives = 226/375 (60%), Gaps = 20/375 (5%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AKE+L + + V KA+ A+ AHR Q R SG+PY++H ++ A +LA + +
Sbjct: 29 AKEYLNDEHA-------ELVKKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDP 81
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ VAAG LHD ++D +S + I +F + VA LV+GV+KL ++ ++E +A+
Sbjct: 82 STVAAGFLHDVVEDTEISLENIEESFNSEVAMLVDGVTKLGKIKYKSQEEQ------QAE 135
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS
Sbjct: 136 NHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISK 195
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++LNP Q+ + + K E + I + L + +I + GR
Sbjct: 196 IKWELEDTALRYLNPQQYYRIVNLMKKKRAEREEYLDDVINVMRGRLSEVSIKSEI-SGR 254
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM + +EI+D+ +R++V + +DCY L ++H W +PG+ KDYI
Sbjct: 255 PKHIYSIYRKMALQNKQFNEIYDLLAVRIVVSSIKDCYAVLGIIHTCWKPMPGRFKDYIA 314
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQ 536
PK N YQSLHT V G PLEVQIRT +MH AEFG AAHW YKEG + SSF +
Sbjct: 315 MPKQNMYQSLHTTVIGPKGDPLEVQIRTMDMHRIAEFGIAAHWAYKEGKRVNEGSSFEEK 374
Query: 537 MVEWARWVLTWQCEA 551
+ W R +L +Q +A
Sbjct: 375 LT-WFREILEFQDDA 388
>gi|449095202|ref|YP_007427693.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
gi|449029117|gb|AGE64356.1| GTP pyrophosphokinase [Bacillus subtilis XF-1]
Length = 734
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAATEGATFEKKLSWFREILEFQNES 375
>gi|347532608|ref|YP_004839371.1| (p)ppGpp synthetase I SpoT/RelA [Roseburia hominis A2-183]
gi|345502756|gb|AEN97439.1| (p)ppGpp synthetase I, SpoT/RelA [Roseburia hominis A2-183]
Length = 788
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 153/381 (40%), Positives = 223/381 (58%), Gaps = 17/381 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E +A+ + H + KA++ A AH GQ R SG+PY++H + A++LA + +
Sbjct: 42 ELIASVRKYHPSADISLIEKAYHVARDAHEGQTRKSGEPYIVHPLCVAIILAELELDKET 101
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+AAGLLHD L+D ++ D I F V LV+GV+KL L +N K A+RL
Sbjct: 102 IAAGLLHDVLEDTVMTADEIKEEFSEEVLLLVDGVTKLRHLHLTDNSHNHDQKDRSAERL 161
Query: 304 H-------TMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 355
MFLAMA D R +LIKLADRLHNM TL + R A+ET EI+ P+A R
Sbjct: 162 EMQAENLRKMFLAMAKDIRVILIKLADRLHNMRTLKYQSKEAQIRIARETQEIYCPIAQR 221
Query: 356 LGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFL 413
LGIS K++L++L K+L P+ + +L ++ + + V S +E++ +K I
Sbjct: 222 LGISKIKIELDDLSLKYLEPEAYYDLVRQIDQRKSVRDDYVQSLVEEVRAHIKAAGI-VA 280
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
+ GR K +SI+ KM+ + T+D+I+D++ +R+IV++ +DCY AL V+H+++ +PG+
Sbjct: 281 EIEGRAKHFFSIYKKMVNQDKTLDQIYDLFAIRIIVDSVKDCYAALGVIHEMYKPIPGRF 340
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK N YQSLHT + G P E+QIRT EMH AE+G AAHW+YKE +
Sbjct: 341 KDYIAMPKPNMYQSLHTTLIGPTGQPFEIQIRTYEMHRTAEYGIAAHWKYKEASNNGGAA 400
Query: 534 VLQMV------EWARWVLTWQ 548
V V W R +L WQ
Sbjct: 401 VPMTVTEEEKLSWLRQILEWQ 421
>gi|456966424|gb|EMG08042.1| RelA/SpoT domain protein, partial [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
Length = 385
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 218/359 (60%), Gaps = 19/359 (5%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ +ERAH+GQ R SG+PY++H ++ +L +G + V+ AGLLHD ++D S
Sbjct: 29 VQKAYDVSERAHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVICAGLLHDVIEDTEYSR 88
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLIK 319
+ + R FG + DLVEGV+K+S++ ++E T A+ + + +A + D R +LIK
Sbjct: 89 EDMIRDFGEDITDLVEGVTKISKIKSQSKE------TEAAENIRKIIVATIKDIRVILIK 142
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LAD+ HN+ TL P K++R A+ETL ++ P+A RLGI K +LE+L F+ LNPD++
Sbjct: 143 LADKTHNLRTLSFQPPEKQRRIAQETLSLYAPIAGRLGIYKIKSELEDLAFQILNPDEYQ 202
Query: 380 ELSSKL------VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
E+ + E F E + +++L + + ++ GR K YSI+ KM K+
Sbjct: 203 EVKKNINSKKSEREGFIETLKIILLQRLSEIQIEADVD-----GRAKHFYSIYRKMKLKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T +EI D+ +R+I +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFNEIFDLRAIRIITNEVKDCYGVLGIVHTLWNPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAM 552
G PLEVQIRT++M+ AE+G AAHW YKEG S ++ V+W + +WQ A+
Sbjct: 318 GPDGKPLEVQIRTRDMNDIAEYGIAAHWIYKEGKPSASEKNVK-VKWLELLSSWQDSAL 375
>gi|156741205|ref|YP_001431334.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus castenholzii DSM
13941]
gi|156232533|gb|ABU57316.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus castenholzii DSM
13941]
Length = 771
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E+ V A+ A AH Q R SG+PY+ H V A +L + ++ VAA LLHD L+D
Sbjct: 71 EELVRNAYAIACEAHSKQQRDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTL 130
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 316
++ + + FGA +A+LV+GV+KLS L RE + MF+AMAD R V
Sbjct: 131 VTKEQLIALFGAEIANLVDGVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVV 184
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ +L +++R A+ETLEI+ PLA+RLGI K +LE+ F LNP
Sbjct: 185 LVKLADRLHNMRTISSLSEERQKRMARETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPA 244
Query: 377 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ E+S +L D E ++ I++L Q L+ + I + GR K +YSI+ KM +K +
Sbjct: 245 KYQEISRQLALRRDARERLIHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGV 303
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++D+I+D +R+IV+ DCY+ L +VH W VPG+ DYI PK + YQSLHT V
Sbjct: 304 SLDQIYDQLAVRVIVDTVADCYRVLGLVHATWPPVPGEFDDYIAMPKESMYQSLHTTVLI 363
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
G P E+QIRT EMH AE G AAHWRYKEG + + + W R ++ W+
Sbjct: 364 PGGQPCEIQIRTHEMHEIAERGIAAHWRYKEGFGRIDASFESKLAWLRGLIEWR 417
>gi|336325683|ref|YP_004605649.1| GTP pyrophosphokinase [Corynebacterium resistens DSM 45100]
gi|336101665|gb|AEI09485.1| GTP pyrophosphokinase [Corynebacterium resistens DSM 45100]
Length = 756
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 221/355 (62%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+ H G +R SG+PY+ H + A + A IG ++T + A LLHDT++D + +
Sbjct: 51 RAYAVAEKLHEGVVRKSGEPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYTLEE 110
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FGA VA LV+GV+KL ++ EA+ + M +A+A D R ++IK+A
Sbjct: 111 LTKDFGAEVARLVDGVTKLDKM--------VLGSAAEAETIRKMIVAIANDPRVLVIKVA 162
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 163 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMATVKWELEDLSFAILYPKKYDEI 222
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + ++ ++ ++E+AL+ I V+ GR K +SI+ KM+ + DEI
Sbjct: 223 VRMVADRAPKRDSYISDVKREIEEALRRSGIHATVV-GRPKHYWSIYQKMIVRGRDFDEI 281
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ DCY A+ +H L+ +PG+ KDYI+ P+F YQSLHT V G P
Sbjct: 282 FDLVGIRILVDSVRDCYGAVGAIHTLYHPMPGRFKDYISAPRFGVYQSLHTTVLGPKAKP 341
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH +AEFG AAHWRYKE H S V QM W R +L WQ EA
Sbjct: 342 LEVQIRTHEMHHKAEFGIAAHWRYKETKGSHKGDSGEVDQMA-WMRQLLDWQKEA 395
>gi|334127724|ref|ZP_08501627.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
gi|333388860|gb|EGK60030.1| GTP diphosphokinase [Centipeda periodontii DSM 2778]
Length = 743
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 145/356 (40%), Positives = 220/356 (61%), Gaps = 19/356 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AH GQ+R SGD Y++H + A +L ++ + + A LLHD ++D + +
Sbjct: 32 RAYVYAEKAHSGQVRISGDAYIMHPLNVAYILTSLHLDDETICAALLHDVVEDTCATLEE 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG + +L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MEAQFGKNIMELIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + KR R AKETLE++ PLANRLGIS KV+LE+LC ++L P+ + L
Sbjct: 146 DRLHNMRTLKYMREDKRHRIAKETLEVYAPLANRLGISNIKVELEDLCLRYLEPEAYYAL 205
Query: 382 SSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E + +I+++ + L+ I + GR K YSI+ KM + +++EI
Sbjct: 206 VEEVKHKRQERQDFIRESIQQIREKLEVAGIEAEI-KGRAKHFYSIYRKMKRDNKSVNEI 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G P
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHG-DP 323
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
LE+QIRTK MH +EFG AAHW+YKE G + Q + W R +++ Q E
Sbjct: 324 LEIQIRTKAMHQVSEFGIAAHWKYKEAGRSIGATDEND---QKMSWLRQMVSLQQE 376
>gi|86609008|ref|YP_477770.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557550|gb|ABD02507.1| RelA/SpoT family protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 760
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 218/356 (61%), Gaps = 15/356 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF + H+GQ R SGDPY+ H V A LL +G ++ VAAGLLHD ++D +
Sbjct: 50 DLLRRAFEFSYCLHQGQKRKSGDPYIAHPVAVATLLRELGGDAVTVAAGLLHDVIEDTEV 109
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ + + FG+ V LVEGV+KLS+ N +SKT +A+ MF+AMA D R +
Sbjct: 110 TPEALEAEFGSEVRLLVEGVTKLSKF-------NFSSKTEQQAENFRRMFVAMAKDIRVI 162
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL L K+++ A ET+EIF PLANRLGI +K +LE+L FK+L+ +
Sbjct: 163 VVKLADRLHNMRTLQYLSPSKQRQIAAETMEIFAPLANRLGIWHFKWELEDLAFKYLDYE 222
Query: 377 QHTEL----SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ ++ ++K E EA + + IE+L Q L + + GR K LYSI+ KM ++
Sbjct: 223 AYRKIQELVNAKRAE--REAEIQAFIEELRQNLLQAGLEHFEISGRPKHLYSIYRKMQQQ 280
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
EI+D+ +R+IV +CY+ L VVH + +PG+ KDYI PK N YQSLHT V
Sbjct: 281 HKEFHEIYDLSAVRVIVHTNSECYRVLAVVHNCFRPIPGRFKDYIGLPKANRYQSLHTAV 340
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
G P+EVQIRT+EMH AE+G AAHW+YKE + W R +L WQ
Sbjct: 341 IGLQGRPVEVQIRTEEMHRVAEYGIAAHWKYKEAGSTTVKPDEERFTWLRQLLEWQ 396
>gi|226185535|dbj|BAH33639.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus erythropolis PR4]
Length = 809
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 108 RAYDVAEDRHSSQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEE 167
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 168 LTKDFGDEVAHLVDGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVA 219
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 220 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 279
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ +V GR K +SI+ KM+ K D+I
Sbjct: 280 VRLVADRAPSRDTYLAKVRAEINSTLSASRINAIV-EGRPKHYWSIYQKMIVKGRDFDDI 338
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 339 HDLVGVRILCEEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 398
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +H+ + ++ + W R +L WQ EA
Sbjct: 399 LEVQIRTQDMHRTAEFGIAAHWRYKETKGKHAGDIAEVDDMAWMRQLLDWQREA 452
>gi|387929855|ref|ZP_10132532.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
gi|387586673|gb|EIJ78997.1| GTP pyrophosphokinase RelA/SpoT [Bacillus methanolicus PB1]
Length = 731
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 153/355 (43%), Positives = 218/355 (61%), Gaps = 13/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ VIKA+ A+ AH Q R SG+PY++H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 NLVIKAYEFAKAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGFLHDVVEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + F VA LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEEMREAFNDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + IE++ L + +I + GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKKKRAEREQYLDEVIEEVRNRLNEVSIKAEI-SGRPKHIYSIYRKMALQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW YKEG ++SSF ++ W R +L +Q
Sbjct: 319 KGDPLEVQIRTFEMHRIAEYGIAAHWAYKEGKSVKENSSFEDKLT-WFREILEFQ 372
>gi|374300791|ref|YP_005052430.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
gi|332553727|gb|EGJ50771.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio africanus str.
Walvis Bay]
Length = 716
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 155/355 (43%), Positives = 214/355 (60%), Gaps = 13/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A AH GQ R SG+PY+ H +E A +LA + + + + LLHDT++D +
Sbjct: 22 LIQKAYVFAAAAHAGQTRLSGEPYMSHPLEVANILADMRLDEFAIVSALLHDTVEDTKAT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+K+S+++ +A+ + M +AMA D R ++I
Sbjct: 82 VDEIESKFGKEVAHIVDGVTKISKMT------FETKAQAQAENIRKMIVAMAEDIRVIMI 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLD K++R A+ETL+I+ PLANRLG+ K +LE+LCF + PD +
Sbjct: 136 KLADRLHNMRTLDFQKSEKQKRIAQETLDIYAPLANRLGLHFIKTELEDLCFMYTRPDAY 195
Query: 379 TELSSKLVECFDE---AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+L K VE + + + I+ L L I VL GR K LYSIH KML++ LT
Sbjct: 196 GQLK-KGVEHYQDIGHEYIAKVIDLLNDMLGRNKIKGRVL-GRTKHLYSIHNKMLQQSLT 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+++D+ R+IV DCY L VH +W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 254 LDQVYDLMAFRVIVSTIRDCYAVLGEVHSIWKPVPGRFKDYISMPKPNMYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+E+QIRT+EMH AE+G AAHW+YKEG V + W R +L WQ E
Sbjct: 314 DGERIEIQIRTEEMHRLAEYGVAAHWQYKEGGGGKPRDV-ERFSWLREILDWQKE 367
>gi|453382568|dbj|GAC82863.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia paraffinivorans NBRC
108238]
Length = 792
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 215/358 (60%), Gaps = 18/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 87 RAYDVAEERHAGQKRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEE 146
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 147 LEKDFGPEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 198
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 199 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 258
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I+ V GR K +SI+ KM+ K D+I
Sbjct: 259 VRLVADRAPSRDTYLARVRADINNALSAARINATV-EGRPKHYWSIYQKMIVKGRDFDDI 317
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 318 HDLVGVRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 377
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS------FVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE ++ S + + W R +L WQ EA
Sbjct: 378 LEVQIRTHEMHRTAEFGIAAHWRYKESGYRNKSGRKTDTAEIDDMAWMRQLLDWQREA 435
>gi|302854267|ref|XP_002958643.1| hypothetical protein VOLCADRAFT_78003 [Volvox carteri f.
nagariensis]
gi|300256032|gb|EFJ40309.1| hypothetical protein VOLCADRAFT_78003 [Volvox carteri f.
nagariensis]
Length = 740
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 191/607 (31%), Positives = 306/607 (50%), Gaps = 72/607 (11%)
Query: 85 SFGYAYSPSKLCGSSSSLKRDQSPVSVFQGPVSCSGSSGLFNGFVRNALGSCVDYDSSSF 144
+FG++ G+SS D+ S P +CS + G + AL +
Sbjct: 104 TFGFS------VGTSSPFI-DEGKFSFPSRPANCSSAP---RGLLSRAL------SNEPI 147
Query: 145 RVHN-GDAVLNVGSSAALIDELTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIK 203
+ H G A+L S+ +D L F + L AQ + +F ++ V+
Sbjct: 148 KEHELGPAMLPAVSADPSVDPLMF----------FPGIPLDLLRQAQASYPVFHKELVVT 197
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD-DAFLSYDY 262
A+ A RAH Q+R +GD L HCVE A LLA +G + VAAGLLH+ L D + S
Sbjct: 198 AYGLAARAHANQLRKNGDSLLSHCVEVAKLLAGLGLDEEAVAAGLLHECLSSDVYRSQLE 257
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLAD 322
F V +++ V+ +S++S+L R+++T+ E + M +AM D +AVL+KLAD
Sbjct: 258 EF--MPPSVVSVLDRVNTISEMSRLYRQHSTSGSFTE-ETFRRMLVAMEDVKAVLVKLAD 314
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
R+HNM T+ LP+ +++ A+ETLE++ +ANRLG+ K +LE+L F L+P+++T L
Sbjct: 315 RIHNMRTVRILPIERQEALARETLEVYSVVANRLGVWCLKAELEDLAFSVLHPEEYTWLK 374
Query: 383 SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK--KKLT---MD 437
+ + D + + I ++ AL + + + GR K+LY I+ K+ K K LT +
Sbjct: 375 NAVRSRQDPVALEATINAIKGALHSHGVKYEDISGRPKNLYGIYSKLKKDGKPLTSESLG 434
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR-PKFNGYQSLHTVVTGEG 496
++D+ LR+IV ++ +CY ALR ++ +P + KD+I K NGYQSLH V GEG
Sbjct: 435 AVYDLMALRVIVASKHECYTALRAAQSVYRTMPARSKDFIKDIKKPNGYQSLHETVYGEG 494
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDR 556
VP+EVQIRT +MH AE+GFAAHW+YKE ++ + ++ RW+ ++ K
Sbjct: 495 DVPVEVQIRTHKMHYIAEYGFAAHWKYKEKLDSEDEWLEKETQYKRWLTQYKLGVHDKKV 554
Query: 557 SCVGNGDSIKPP---------CTFPSHADDC------PF----SYKPQCSHDGPVFVIMI 597
G+ PP + +D PF +K Q V V++
Sbjct: 555 RPQGS-----PPTDGSLKSLGVAYLDAPEDQQGSLLDPFLRHQRFKLQVPVKTEVSVLLA 609
Query: 598 ENDKMSVQEFPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMG 657
+D + +EFP +T L W G L+ +N++ + L+ G
Sbjct: 610 TSDGVETKEFPLGTTAQHL----------WQELGLGLQPGYALTVNNR-LPSGEAALQSG 658
Query: 658 DVVELTP 664
D+V++ P
Sbjct: 659 DLVQVLP 665
>gi|298491762|ref|YP_003721939.1| (p)ppGpp synthetase I ['Nostoc azollae' 0708]
gi|298233680|gb|ADI64816.1| (p)ppGpp synthetase I, SpoT/RelA ['Nostoc azollae' 0708]
Length = 758
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 158/357 (44%), Positives = 213/357 (59%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ AF A + H+GQ R SG+ Y+ H V A LL +G + ++ AG LHD ++D ++
Sbjct: 43 LICHAFQFAYQLHQGQYRKSGEAYIAHPVAVAGLLRDLGGSPAMIGAGFLHDVVEDTEVT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FGA V LVEGV+KLS++ N T+ +A+ MFLAMA D R +++
Sbjct: 103 IEEIEEHFGAEVRQLVEGVTKLSKI------NFTSKTESQAENFRRMFLAMAQDIRVIVV 156
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + R+R A+ET +IF PLANRLGI K +LE+L FK+L PD
Sbjct: 157 KLADRLHNMRTLQYMSEASRRRSAQETRDIFAPLANRLGIWRVKWELEDLAFKYLEPDAF 216
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E E + A E L + ++ I L + GR K LYSI+ KM ++
Sbjct: 217 REIQQHVSEKRTAREEKLARATEVLRKRMQQAGIQCLDVSGRPKHLYSIYQKMHRQHKEF 276
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ LR+IV+ E+CY+AL VVH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 HEIYDLAALRIIVQTNEECYRALAVVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIGLT 336
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW+YKE +S + E W R +L WQ +
Sbjct: 337 GRPLEVQIRTMEMHHVAEYGIAAHWKYKETGGSTNSQLTGTDEKFTWLRQLLEWQSD 393
>gi|442770988|gb|AGC71687.1| GTP pyrophosphokinase ppGpp synthetase I [uncultured bacterium
A1Q1_fos_300]
Length = 716
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 177/473 (37%), Positives = 251/473 (53%), Gaps = 60/473 (12%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ AE AH+ Q R SG+PY++H + A LA +G + VV AGLLHD L+D F+
Sbjct: 73 LIKKAYLLAEDAHKFQKRLSGEPYIIHPLAVAHTLADLGLDHEVVCAGLLHDVLEDTFIK 132
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLI 318
+Y+ + FG + LVE V+K+S L EN +A + M +A + D+R +LI
Sbjct: 133 PEYMRQEFGETITYLVESVTKISVLKTQTAENK------QAINIRKMIMATIRDSRVILI 186
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLAD+LHNM TL K + A+E LEI+ PLA RLGI K +LE+L HL+ +
Sbjct: 187 KLADKLHNMRTLGFHSTNKGMQIAREVLEIYAPLAGRLGIYKIKSELEDLALYHLDRTTY 246
Query: 379 TELSSKLVECFDE-----AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ K+ E + AMV S L Q LK+ I V GR K YSI+ KM+++K
Sbjct: 247 ALIKDKIAEKKGQRDGRVAMVMSL---LTQHLKESKIKATV-EGRSKHFYSIYNKMIEQK 302
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+ ++I+D+ G+R++V DCY L +VH LW +PG+ KDYI+ PK NGYQSLHT V
Sbjct: 303 KSFEDIYDLTGVRVLVNEVPDCYTVLGLVHTLWTPIPGRFKDYISVPKSNGYQSLHTTVI 362
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G G P+EVQIRT +MH +EFG A+HW YKE ++F Q L Q A+S
Sbjct: 363 GPGGQPIEVQIRTWKMHRVSEFGIASHWAYKEKPGDQATFETQF-------LDLQNMAIS 415
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
D V +GD + + S A++ S G +F + P +STV
Sbjct: 416 DDE--VDSGDFYQELVSNLSQANEVYI-----ISPKGKIFTM------------PENSTV 456
Query: 614 MDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDP----RCKLKMGDVVEL 662
+D + F + ++ R +GD R LK GD +E+
Sbjct: 457 LD--------------FAFRIHTDIGLRCAGAKIGDRLVSIRTPLKNGDQIEI 495
>gi|410456899|ref|ZP_11310748.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
gi|409927039|gb|EKN64186.1| GTP pyrophosphokinase [Bacillus bataviensis LMG 21833]
Length = 731
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 213/354 (60%), Gaps = 11/354 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A+ AHR Q R SG+PY++H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 ELVSKAYEYAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPATVAAGFLHDVVEDTNI 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S I F VA LV+GV+KL + + E +A+ MF+AMA D R +L
Sbjct: 86 SLKDIEEAFNDEVAMLVDGVTKLGKFKYKSHEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP+ K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + I +++ + + +I L GR K +YSI+ KM+ +
Sbjct: 200 YYRIVNLMKKKRAEREQYLEDVIVEVKARMGEVSIK-AELSGRPKHIYSIYRKMVLQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FSEIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD-CQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AEFG AAHW YKEG SS Q + W R +L +Q
Sbjct: 319 KGDPLEVQIRTYEMHRIAEFGVAAHWAYKEGKTISDSSTFEQKLTWFREILEFQ 372
>gi|357588769|ref|ZP_09127435.1| GTP pyrophosphokinase [Corynebacterium nuruki S6-4]
Length = 759
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 225/355 (63%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+ H G +R SG+PY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 49 RAYTTAEKLHEGVLRKSGEPYITHPLAVANIAAEIGMDTTTLVAALLHDTVEDTDYSLED 108
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 109 LTRDFGPEVALLVDGVTKLDKVA--------LGSAAEAETIRKMIVAMAHDPRVLVIKVA 160
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 161 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMATIKWELEDLSFAILYPKKYDEI 220
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + +T I++++Q + +I+ V+ GR K +SI+ KM+ + D+I
Sbjct: 221 VRLVADRAPKRDQYLTKVIDEIQQTMTSAHITAEVV-GRPKHYWSIYQKMIVRGRDFDDI 279
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V++ +DCY A+ VH L+ +PG+ KDYI++P+F Y+SLHT V G
Sbjct: 280 YDLVGIRILVDDVKDCYAAIGAVHSLYQPMPGRFKDYISQPRFGVYRSLHTTVIGPDAKA 339
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
LEVQIRT EMH +AE+G AAHWRYKE H ++ V QM W R +L WQ EA
Sbjct: 340 LEVQIRTHEMHYEAEYGIAAHWRYKETKGSHKGDNAEVDQMA-WMRQLLDWQKEA 393
>gi|345848758|ref|ZP_08801777.1| GTP pyrophosphokinase [Streptomyces zinciresistens K42]
gi|345639843|gb|EGX61331.1| GTP pyrophosphokinase [Streptomyces zinciresistens K42]
Length = 843
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 157/371 (42%), Positives = 219/371 (59%), Gaps = 33/371 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 125 VEKAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 184
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 185 DQLRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 236
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 237 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 296
Query: 380 ELSSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ + E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 297 EIVRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGR 352
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 353 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIG 412
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVE 539
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L +
Sbjct: 413 PNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPRTSGKGKDDHLNDMA 472
Query: 540 WARWVLTWQCE 550
W R +L WQ E
Sbjct: 473 WLRQLLDWQKE 483
>gi|257870870|ref|ZP_05650523.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|357051393|ref|ZP_09112586.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
gi|257805034|gb|EEV33856.1| RelA/SpoT protein [Enterococcus gallinarum EG2]
gi|355379902|gb|EHG27051.1| GTP pyrophosphokinase [Enterococcus saccharolyticus 30_1]
Length = 736
Score = 275 bits (704), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 218/357 (61%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH+ Q R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 27 FVQKALDYATEAHKDQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTEVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FGA VA LV+GV+KL ++ + E A + M +AMA D R +++
Sbjct: 87 LADLKEVFGADVAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + +E A V+ +E++ A ++ +I F + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMQTKREEREAYVSETVEQIRLATEELDI-FAEIYGRPKHIYSIYRKMKDQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVIVDSIKDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 320 GNPVEIQIRTHEMHEIAEFGVAAHWAYKEGRTEKVKADKMTQQVGWFREILELQDES 376
>gi|296139654|ref|YP_003646897.1| (p)ppGpp synthetase I SpoT/RelA [Tsukamurella paurometabola DSM
20162]
gi|296027788|gb|ADG78558.1| (p)ppGpp synthetase I, SpoT/RelA [Tsukamurella paurometabola DSM
20162]
Length = 779
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/360 (42%), Positives = 216/360 (60%), Gaps = 17/360 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE+ H QMR SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 72 LIERAYDVAEQRHATQMRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYS 131
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG+ VA LV+GV+KL +++ EA+ + M +AMA D R ++I
Sbjct: 132 LDQLTAEFGSEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVI 183
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L+P ++
Sbjct: 184 KVADRLHNMRTMRFLPPEKQARKAKETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKY 243
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + + S ++ AL I V GR K +SI+ KM+ K
Sbjct: 244 DEIVRLVADRAPSRDTYLASVRAEINGALTASRIVADV-QGRPKHYWSIYQKMIVKGRDF 302
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G
Sbjct: 303 DDIHDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPE 362
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
PLEVQIRT++MH AEFG AAHWRYKE + + E W R +L WQ EA
Sbjct: 363 GKPLEVQIRTRDMHRTAEFGIAAHWRYKETKGKGGKGGSDLSEVDDMAWMRQLLDWQREA 422
>gi|392943901|ref|ZP_10309543.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
gi|392287195|gb|EIV93219.1| (p)ppGpp synthetase, RelA/SpoT family [Frankia sp. QA3]
Length = 836
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 232/392 (59%), Gaps = 32/392 (8%)
Query: 178 LETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAI 237
L+ + LAN H D V +AF A+ AH GQ+R SG PY+ H + A +LA +
Sbjct: 99 LDPVLRGLLAN----HPRADLDQVQRAFEVADAAHAGQVRFSGHPYITHPIAVASILADL 154
Query: 238 GANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT 297
G ++ ++A LLHDTL++ LS + I TFG +A +V+ VSKL+++ +
Sbjct: 155 GMDTPTLSAALLHDTLEETSLSAEAIRETFGDQIALIVDAVSKLNRVK--------VGEA 206
Query: 298 VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRL 356
+A+ + M +AMA D RA+++KLADRLHNM TL LP K++R A+ETLE++ PLA+RL
Sbjct: 207 AQAETIRRMVVAMARDPRALVVKLADRLHNMRTLRFLPEHKQERKARETLEVYAPLAHRL 266
Query: 357 GISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLV 414
G+++ K +LE+L F L P ++ E+ + + + + I +++ + D I V
Sbjct: 267 GMNSLKWELEDLAFAALYPKRYDEIVRLVADRAPSRDVYLAEVIGQVQAGVGDARIR-AV 325
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMK 474
+ GR K YSI+ KM+ + + D+I+D+ G+R++V++ DCY L VH W +PG+ K
Sbjct: 326 VSGRPKHYYSIYQKMVVRGRSFDDIYDLVGIRVLVDSVRDCYATLGTVHANWKPIPGRFK 385
Query: 475 DYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSS 532
DYI PKFN YQSLHT V G P+E+QIRT MH +AE+G AAHW+YKE + S+
Sbjct: 386 DYIAMPKFNMYQSLHTTVIGPEGKPVELQIRTHAMHNRAEYGIAAHWKYKEDGVAARPSA 445
Query: 533 FVL--------------QMVEWARWVLTWQCE 550
V+ ++ W R VL WQ E
Sbjct: 446 GVVDGGRSGRRRGGPEPDLMSWLRQVLDWQRE 477
>gi|291549196|emb|CBL25458.1| (p)ppGpp synthetase, RelA/SpoT family [Ruminococcus torques L2-14]
Length = 773
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/361 (39%), Positives = 225/361 (62%), Gaps = 15/361 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ + AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D ++ D
Sbjct: 62 KAYQIGKEAHKNQFRKSGEPYIIHPLWVAIILADLEMDKETIVAGMLHDVVEDTTMTLDE 121
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 320
I FG VA LV+GV+KL QL N + K +A+ L MFLAMA D R +++KL
Sbjct: 122 ISAEFGEEVALLVDGVTKLGQL------NYSQDKLEAQAENLRKMFLAMAKDIRVIIVKL 175
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM T++ + K++ ++ET++I+ P+A RLGIS K +L++L K+ P+ + +
Sbjct: 176 ADRLHNMRTMEFMTPAKQKEKSRETMDIYAPIAQRLGISKIKTELDDLSLKYYQPEVYNQ 235
Query: 381 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L L + E V + ++ + +K+ +I V GR K +SI+ KM+ + T+D+
Sbjct: 236 LVHDLNARKTEREEFVQQIVAEVSKHMKNADIEAKVY-GRVKHFFSIYKKMVNQNKTLDQ 294
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
++D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 295 VYDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKANMYQSLHTTLIGPSGQ 354
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQ--MVEWARWVLTWQCEAMSKD 555
P E+QIRT+EMH AE+G AAHW+YKE G Q + W R +L WQ + MS +
Sbjct: 355 PFEIQIRTEEMHKTAEYGIAAHWKYKETGGSNTKGLNTQEEKLNWLRQILEWQRD-MSDN 413
Query: 556 R 556
R
Sbjct: 414 R 414
>gi|210616270|ref|ZP_03291020.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
gi|210149868|gb|EEA80877.1| hypothetical protein CLONEX_03241 [Clostridium nexile DSM 1787]
Length = 781
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/371 (40%), Positives = 226/371 (60%), Gaps = 14/371 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KAF A AH GQ R SG+ Y++H + ++LA + + + AG+LHD ++D ++
Sbjct: 67 MVEKAFNIAYHAHEGQFRKSGEAYIIHPLWVGIILADLELDKETIVAGILHDVVEDTVMT 126
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVL 317
I FG+ VA LV+GV+KL QLS +A K V+A+ L MFLAMA D R +L
Sbjct: 127 EQEITEIFGSEVALLVDGVTKLGQLS------YSADKLEVQAENLRKMFLAMAKDIRVIL 180
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K+ A+ET++I+ P+A RLGIS K +L++L K+ P+
Sbjct: 181 IKLADRLHNMRTLQFMRPEKQIEKARETMDIYAPIAQRLGISRIKTELDDLSLKYSQPEV 240
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+L ++ + E V +E++ + +K+ I V GR K +SI+ KM+ + T
Sbjct: 241 FYDLVQQINARKTEREEFVQQIVEEVSEHMKNAKIKAEV-KGRVKHFFSIYKKMVNQDKT 299
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+I+D++ +R+IVE+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT +
Sbjct: 300 VDQIYDLFAVRIIVESVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSS 359
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAM 552
P E+QIRT+EMH AE+G AAHW+YKE + S Q E W R +L WQ +
Sbjct: 360 VGQPFEIQIRTEEMHKTAEYGIAAHWKYKESNDGKKSVAAQEEEKLSWLRQILEWQQDTD 419
Query: 553 SKDRSCVGNGD 563
+++ + GD
Sbjct: 420 NREFLSLLKGD 430
>gi|167570843|ref|ZP_02363717.1| GTP pyrophosphokinase [Burkholderia oklahomensis C6786]
Length = 788
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ + AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|441508395|ref|ZP_20990319.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia aichiensis NBRC 108223]
gi|441447423|dbj|GAC48280.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia aichiensis NBRC 108223]
Length = 830
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 215/358 (60%), Gaps = 20/358 (5%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ A+ HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S + +
Sbjct: 126 AYDVADERHRGQDRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEAL 185
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+AD
Sbjct: 186 ESEFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVAD 237
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 238 RLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIV 297
Query: 383 SKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + + + + AL I+ V GR K +SI+ KM+ K D+IH
Sbjct: 298 RLVADRAPSRDTYLARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIH 356
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ G+R++ ++ DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PL
Sbjct: 357 DLVGMRILCDDVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPL 416
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
EVQIRT +MH AEFG AAHWRYKE G ++ + M W R +L WQ EA
Sbjct: 417 EVQIRTNDMHRTAEFGIAAHWRYKENGYRDRKGRKSDAAEIDDMA-WMRQLLDWQREA 473
>gi|326382134|ref|ZP_08203826.1| RelA/SpoT family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326198864|gb|EGD56046.1| RelA/SpoT family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 729
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/357 (43%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S D
Sbjct: 26 QAYSVAEEHHSGQFRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLDQ 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 86 LEADFGTEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 137
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 138 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEI 197
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + L AL I+ V GR K +SI+ KM+ K D+I
Sbjct: 198 VRLVADRAPSRDTYLARVRSDLNTALGASRITATV-EGRPKHYWSIYQKMIVKGKDFDDI 256
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G P
Sbjct: 257 HDLVGMRILCDEVRDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKP 316
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 317 LEVQIRTFEMHRTAEFGIAAHWRYKEGRKGKGRKATDVAEVDDMAWMRQLLDWQREA 373
>gi|255658298|ref|ZP_05403707.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
gi|260849615|gb|EEX69622.1| GTP diphosphokinase [Mitsuokella multacida DSM 20544]
Length = 740
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 143/357 (40%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ A +AH GQ R SG+ Y++H + A +L + + ++A LLHD ++D
Sbjct: 28 DLIRRAYELARKAHAGQTRVSGEAYIIHPLHVAQILTQLHLDDATISAALLHDVVEDTIY 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA L++GV+KL +L ++E + + MFLAMA D R ++
Sbjct: 88 TNDQMKEMFGDEVAMLIDGVTKLGRLQYKSKEE------AQLESYRKMFLAMAKDIRVIM 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++R A+ET+EI+ PLANRLGIS+ K +LE+LC ++L P+
Sbjct: 142 IKLADRLHNMRTLKYMREDKQKRIARETIEIYAPLANRLGISSIKWELEDLCLRYLEPEI 201
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L + + E + ++IE++++ L + +I + GR K YSI+ KM +
Sbjct: 202 YYDLVENVKQKRKERQTFIDTSIEQIKEKLAEAHIKADI-SGRAKHFYSIYKKMKRDNKE 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ EI+D+ +R++V++ +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V
Sbjct: 261 LSEIYDLSAVRVLVDSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTR 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCE 550
G PLE+QIRT MH +E+G AAHW+YKE + + V Q + W R ++ Q E
Sbjct: 321 GY-PLEIQIRTFAMHQVSEYGVAAHWKYKEAGKGAKATGAVDQKMSWLRQMVNLQQE 376
>gi|359421083|ref|ZP_09213013.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia araii NBRC 100433]
gi|358242948|dbj|GAB11082.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia araii NBRC 100433]
Length = 819
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 216/359 (60%), Gaps = 19/359 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H GQ R SGD Y+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 113 RAYDIAEAQHEGQYRKSGDSYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEQ 172
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 173 ITGDFGPEVAHLVDGVTKLDKVA--------LGTAAEAETIRKMIIAMARDPRVLVIKVA 224
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 225 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEI 284
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + + QAL +S +V GR K +SI+ KM+ K D+I
Sbjct: 285 VRLVADRAPSRDTYLARVRDDIGQALAGARLSAIV-EGRPKHYWSIYQKMIVKGRDFDDI 343
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E+ DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 344 HDLVGVRILCEDVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 403
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE G + + + W R +L WQ EA
Sbjct: 404 LEVQIRTQDMHRTAEFGIAAHWRYKESGYRDRKGQKRAELAEIDDMAWMRQLLDWQREA 462
>gi|307243827|ref|ZP_07525958.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
gi|306492830|gb|EFM64852.1| GTP diphosphokinase [Peptostreptococcus stomatis DSM 17678]
Length = 741
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 158/376 (42%), Positives = 229/376 (60%), Gaps = 18/376 (4%)
Query: 177 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 236
NL K + NA + D V++A+ A+ AH+ Q R SG+PY++H V A +LA
Sbjct: 8 NLIEKIKAYAPNADI-------DKVVRAYNLAKEAHKDQFRKSGEPYIIHPVAVANILAD 60
Query: 237 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 296
+ + + GLLHD ++D I FG VA LV+GV+KL ++ + +E + AS
Sbjct: 61 MELDIDTICGGLLHDVVEDTDFEEADIEEMFGKDVAALVDGVTKLGKIKYMTKEESQASN 120
Query: 297 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 355
L MF+AMA D R +LIKL+DRLHNM TL+ + K + A+ETL+I+ +A+R
Sbjct: 121 ------LRKMFMAMAKDMRVMLIKLSDRLHNMRTLEYMDSNKVKYKAQETLDIYAGIAHR 174
Query: 356 LGISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFL 413
LGIST K +LE+L F+ L PD++ EL +++ + + EA + + +++ + DK +
Sbjct: 175 LGISTIKWELEDLAFRFLYPDEYYELVNRVNKKREQREAYIDEIVTIIKKDMDDKGVECD 234
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
V GR K YSI KM KK + DEI+D+ +R++V+ + DCY L VH LW +PG+
Sbjct: 235 VY-GRPKHFYSIFKKMKKKNKSFDEIYDLTAVRVLVDTDRDCYAVLGEVHTLWKPIPGRF 293
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS-S 532
KDYI PK N YQSLHT V G P+E+QIRT EMH AEFG AAHW+YKEG +S S
Sbjct: 294 KDYIAMPKPNMYQSLHTTVIGSDGEPVEIQIRTYEMHNVAEFGIAAHWKYKEGVTDNSLS 353
Query: 533 FVLQMVEWARWVLTWQ 548
V + ++W R ++ W+
Sbjct: 354 DVDRRLQWLRQMMEWE 369
>gi|260437936|ref|ZP_05791752.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
gi|292809687|gb|EFF68892.1| GTP diphosphokinase [Butyrivibrio crossotus DSM 2876]
Length = 762
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 145/358 (40%), Positives = 224/358 (62%), Gaps = 19/358 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA+ A++AH GQ R SG+PY++H + A++LA + + + AG+LHD ++D ++
Sbjct: 47 LIEKAYKVADKAHSGQKRKSGEPYIIHPLCVAIILAQLELDKETIIAGILHDVIEDTEVT 106
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ I R FG VA LV+GV+KL+QL+ E++ ++A+ L MFLAMA D R +LI
Sbjct: 107 YEDISREFGEEVALLVDGVTKLTQLN---YEHDKIE--IQAENLRKMFLAMAKDIRVILI 161
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM T+ K+ ++ET+EI+ P+A RLGIS KV+L++L +L PD +
Sbjct: 162 KLADRLHNMRTMQYQKPEKQIEKSRETMEIYSPIAQRLGISKIKVELDDLSLMYLQPDVY 221
Query: 379 TELSSKLV--ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L L + E V + ++++ L I++ + GR K +SI+ KM+ + T+
Sbjct: 222 HKLEHDLTLGKEARENFVKEIVAEVKEKLSTTGINY-TIDGRVKHFFSIYKKMVNQDKTL 280
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+D++ +R+IV+ +DCY L ++H+++ +PG+ KDYI PK N YQSLHT + +
Sbjct: 281 DQIYDLFAVRIIVDTIKDCYAVLGLIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLISQT 340
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE------GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE GD + + W R +L WQ
Sbjct: 341 GQPFEIQIRTYEMHRTAEYGIAAHWKYKENIDGTKGDDSEEA----KLTWLRQILEWQ 394
>gi|167563693|ref|ZP_02356609.1| GTP pyrophosphokinase [Burkholderia oklahomensis EO147]
Length = 788
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ + AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP+++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPNRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIGAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|51893575|ref|YP_076266.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
gi|51857264|dbj|BAD41422.1| GTP pyrophosphokinase [Symbiobacterium thermophilum IAM 14863]
Length = 735
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/350 (42%), Positives = 213/350 (60%), Gaps = 12/350 (3%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
AF A++AH GQ R SG+PY+ H + A ++A++ + +AA LLHD L+D + Y+ +
Sbjct: 29 AFAFAKQAHEGQCRRSGEPYITHPIAVAEIVASLELDEESIAAALLHDVLEDCGVKYEEL 88
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG VA LV+GVSKL +L +R+ + + L MFLAMA D R +LIKLAD
Sbjct: 89 EERFGKEVATLVDGVSKLDRLQFTSRDE------AQVENLRKMFLAMAKDLRVILIKLAD 142
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM TL P + R A+ET++I+ PLA+RLG+S K +LE+L F+ L PD++ E++
Sbjct: 143 RLHNMRTLKHQPSDAQVRIAQETMDIYAPLAHRLGLSEIKWELEDLAFRILEPDRYQEMA 202
Query: 383 SKLVECFDEAMVTSA--IEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ E M + +++L + L+ + I + GR K YSI+ KM ++ + +I+
Sbjct: 203 YLVARKRQERMAITQDLMDQLREVLEKEGIQAEI-SGRPKHFYSIYKKMYRQGKDISQIY 261
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ +R+IVE +DCY L ++H W +P + KDYI PK N YQSLHT V G P
Sbjct: 262 DLIAIRIIVEEVKDCYAVLGIIHSHWKPLPLRFKDYIATPKPNMYQSLHTTVIGPHGEPF 321
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
E+QIRT+EMH AEFG AAHW YKEG + ++W R +L W E
Sbjct: 322 EIQIRTREMHRTAEFGVAAHWSYKEGKTDKE--FDRKLQWLRSLLEWHQE 369
>gi|377563150|ref|ZP_09792501.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sputi NBRC 100414]
gi|377529398|dbj|GAB37666.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia sputi NBRC 100414]
Length = 802
Score = 275 bits (704), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 215/357 (60%), Gaps = 18/357 (5%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ A+ HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + +
Sbjct: 98 AYDVADERHRGQNRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLEAL 157
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+AD
Sbjct: 158 ESEFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVAD 209
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 210 RLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIV 269
Query: 383 SKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + + + + AL I+ V GR K +SI+ KM+ K D+IH
Sbjct: 270 RLVADRAPSRDTYLARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIH 328
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ G+R++ ++ DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PL
Sbjct: 329 DLVGMRILCDDVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPL 388
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQH------SSFVLQMVEWARWVLTWQCEA 551
E+QIRT +MH AEFG AAHWRYKEG + + + + W R +L WQ EA
Sbjct: 389 EIQIRTNDMHRTAEFGIAAHWRYKEGGYRDRKGRKTDTAEIDDMAWMRQLLDWQREA 445
>gi|225026135|ref|ZP_03715327.1| hypothetical protein EUBHAL_00376 [Eubacterium hallii DSM 3353]
gi|224956540|gb|EEG37749.1| RelA/SpoT family protein [Eubacterium hallii DSM 3353]
Length = 758
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 221/352 (62%), Gaps = 10/352 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH+ Q R SG+PY++H + A++LA + + + AG+LHD ++D +
Sbjct: 46 MVEKAYKLARDAHKDQKRKSGEPYIIHPLCVAIILAELELDKETIVAGILHDVVEDTTAT 105
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + R F VA LV+GV+KL QLS + ++A+ L MFLAMA D R +LI
Sbjct: 106 LEDLSREFNDEVALLVDGVTKLGQLS-----YSHDKMDLQAENLRKMFLAMAKDIRVILI 160
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL + K++ A+ET++I+ P+A+RLGIS K +L++L K+L P+ +
Sbjct: 161 KLADRLHNMRTLQYMRPEKQKEKARETMDIYAPIAHRLGISKIKTELDDLSLKYLQPEVY 220
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+L KL + E + S I+++ + +++ I + GR K L+SI+ KM + T+
Sbjct: 221 KDLEEKLQTNKEGRENFIQSIIDEVSKHIEEAGIRAEI-DGRVKHLFSIYKKMRNQNKTL 279
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I+DI+ +R+ V+ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 280 DQIYDIFAVRIKVDTVKDCYAALGVIHEMYKPIPGRFKDYIAMPKQNMYQSLHTTLIGSS 339
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKEG + + + W R +L WQ
Sbjct: 340 GTPFEIQIRTFEMHRTAEYGIAAHWKYKEGGGNINKEE-EKLSWLRQILEWQ 390
>gi|428779441|ref|YP_007171227.1| RelA/SpoT family (p)ppGpp synthetase [Dactylococcopsis salina PCC
8305]
gi|428693720|gb|AFZ49870.1| (p)ppGpp synthetase, RelA/SpoT family [Dactylococcopsis salina PCC
8305]
Length = 762
Score = 275 bits (703), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 154/356 (43%), Positives = 211/356 (59%), Gaps = 14/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ AF A H GQ R SG+PY+ H V A L+ +G S ++ AG LHD ++D ++
Sbjct: 47 LIADAFQFAYELHEGQYRRSGEPYIAHPVAVAGLIRDLGGGSAMIGAGFLHDIVEDTEVT 106
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVL 317
+ I FG V LVEGV+KLS+ N +SKT +A+ MFLAMA D R ++
Sbjct: 107 CEEIEERFGESVRHLVEGVTKLSKF-------NFSSKTERQAENFRRMFLAMAKDIRVIV 159
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL L K+++ A ET EIF PLANRLGI ++K +LE+L FK+L P+
Sbjct: 160 VKLADRLHNMRTLQHLKPEKQKQIALETREIFAPLANRLGIGSFKWELEDLSFKYLEPEA 219
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
E+ + + E + + E L++ I L GR K LY I+ KM +++ T
Sbjct: 220 FQEIRELVADRRTDREKRIQTVTEALQKRFDQGGIEVEELKGRPKHLYGIYQKMQQQQKT 279
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+D+ G+R+I++ EDCY+AL ++H + +PG+ KDYI PK N YQSLHT V G
Sbjct: 280 FAEIYDLAGVRVILKTREDCYRALAIIHDEFKPIPGRFKDYIGLPKPNRYQSLHTTVIGG 339
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL--QMVEWARWVLTWQ 548
P+E+QIRT EMH AE+G AAHW YKE G F + W R +L WQ
Sbjct: 340 YGKPIEMQIRTLEMHYIAEYGIAAHWLYKETGGTSDFKFTAEDEKFTWLRQLLEWQ 395
>gi|167758796|ref|ZP_02430923.1| hypothetical protein CLOSCI_01138 [Clostridium scindens ATCC 35704]
gi|167663536|gb|EDS07666.1| RelA/SpoT family protein [Clostridium scindens ATCC 35704]
Length = 781
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 147/360 (40%), Positives = 229/360 (63%), Gaps = 13/360 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A++AH GQ R SG+PY++H + A++LA + + + +G+LHD ++D + +
Sbjct: 69 KAYQLAKKAHGGQCRKSGEPYIVHPLWVAIILADLEMDKETIVSGMLHDVVEDTEVGEED 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA LV+GV+KL +LS ++ V+A+ L MFLAMA D R ++IKLA
Sbjct: 129 IKREFGEEVALLVDGVTKLGRLS-----YSSDKLEVQAENLRKMFLAMAKDIRVIIIKLA 183
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL+ + K++ AKET++I+ P+A RLGIS K +L++L K+ P+ +L
Sbjct: 184 DRLHNMRTLEFMTPAKQKEKAKETMDIYAPIAQRLGISKIKTELDDLALKYSQPEVFFDL 243
Query: 382 SSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ + E V ++++ +K+ +I V GR K +SI+ KM+ + T+D++
Sbjct: 244 VNQINARKTEREEFVQQIVDEVSTHMKNASIKADV-NGRVKHFFSIYKKMVNQDKTVDQV 302
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D++ +R+IV++ +DCY AL V+H+++ +PG+ KDYI PK N YQSLHT + P
Sbjct: 303 YDLFAVRIIVDSVKDCYAALGVIHEMYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSVGQP 362
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCEAMSKDR 556
E+QIRT+EMH AE+G AAHW+YKE + S Q E W R +L WQ + MS +R
Sbjct: 363 FEIQIRTQEMHKTAEYGIAAHWKYKESNDGKKSVEAQEEEKLSWLRQILEWQRD-MSDNR 421
>gi|359687928|ref|ZP_09257929.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750353|ref|ZP_13306639.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
gi|418758451|ref|ZP_13314633.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|384114353|gb|EIE00616.1| GTP diphosphokinase [Leptospira licerasiae serovar Varillal str.
VAR 010]
gi|404272956|gb|EJZ40276.1| putative GTP diphosphokinase [Leptospira licerasiae str. MMD4847]
Length = 677
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 166/465 (35%), Positives = 252/465 (54%), Gaps = 44/465 (9%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ +E +H+GQ R SG+PY++H ++ +L +G + V++AG+LHD ++D
Sbjct: 27 ELIEKAYKVSEDSHQGQFRLSGEPYIVHPLQVGFILYELGLDEKVISAGILHDVIEDTKY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVL 317
+ + + R FG + LVEGV+K+SQ+ ++E T A+ + + +A + D R +L
Sbjct: 87 TKEDMVRDFGTEITQLVEGVTKISQIKSQSKE------TEAAENIRKIIIATIQDIRVIL 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLAD+ HNM TL P K++R A ETL ++ P+A RLGI + K +LE+L F+ + P++
Sbjct: 141 IKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAGRLGIYSVKSELEDLAFQVIFPEE 200
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 434
+ ++ ++ E IEKL+ LK + + + GR K +SI+ KM K+
Sbjct: 201 YQDIKKRISAKKSER--EDYIEKLQLILKQRLAEIQINANVEGRAKHFFSIYRKMKTKEK 258
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T DEI D+ +R++ + +DCY L +VH LW+ VPG+ KDYI PK N YQSLHT V G
Sbjct: 259 TFDEIFDLRAIRIVTDEIKDCYGVLGIVHTLWSPVPGRFKDYIATPKTNMYQSLHTTVIG 318
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSK 554
PLEVQIRT EM+ AEFG AAHW YKEG H++ V+W + TWQ
Sbjct: 319 PDGKPLEVQIRTAEMNAIAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQTWQ------ 371
Query: 555 DRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
DS P F ++ + H+ VFV K + + P +TV+
Sbjct: 372 --------DSSLDPKEF---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATVL 412
Query: 615 DLLERAGRG------SSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
D R ++ + PL+ ELR + V D R K
Sbjct: 413 DFAFRIHTDVGLHCKGAKINGRMIPLRTELRSGDQVEVVVDKRSK 457
>gi|269956465|ref|YP_003326254.1| (p)ppGpp synthetase I SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
gi|269305146|gb|ACZ30696.1| (p)ppGpp synthetase I, SpoT/RelA [Xylanimonas cellulosilytica DSM
15894]
Length = 781
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 211/358 (58%), Gaps = 20/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AHRGQ+R SGDPY+ H V A +LA +G T +AA LLHDT++D S D
Sbjct: 65 RAYTVAEKAHRGQLRKSGDPYITHPVSVATILAELGFEGTTIAAALLHDTVEDTDYSLDQ 124
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG A LV+GV+KL ++ +A+ + M +AMA D R ++IKLA
Sbjct: 125 LRTDFGDDAALLVDGVTKLDKVKY--------GDAAQAETVRKMVVAMAKDIRVLVIKLA 176
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN T +P +R A+ETLEI+ PLA+RLG++T K +LE+L F+ L P + E+
Sbjct: 177 DRLHNARTWKYVPSSSAERKARETLEIYAPLAHRLGMNTIKWELEDLSFQALYPKVYDEI 236
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E E ++ E+++ L+ I V GR K YSI+ KM+ + +I
Sbjct: 237 VHLVAERAPAREEYLSVVREQIQADLRGAKIKATV-TGRPKHYYSIYQKMIVRGHDFQDI 295
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G R++V++ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G P
Sbjct: 296 YDLVGTRVLVDSVRDCYAALGALHARWNPVPGRFKDYIAMPKFNMYQSLHTTVVGPGGKP 355
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCE 550
+E+QIRT +MH +AE+G AAHW+YKE G M W R ++ WQ E
Sbjct: 356 VEIQIRTHDMHRRAEYGVAAHWKYKEPAKQGKPGATPEEQRTNDMA-WLRQLVDWQRE 412
>gi|315303282|ref|ZP_07873919.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
gi|313628349|gb|EFR96845.1| GTP diphosphokinase [Listeria ivanovii FSL F6-596]
Length = 738
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEAFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLNDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMTEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDY+ PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYVAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|326791627|ref|YP_004309448.1| (p)ppGpp synthetase I SpoT/RelA [Clostridium lentocellum DSM 5427]
gi|326542391|gb|ADZ84250.1| (p)ppGpp synthetase I, SpoT/RelA [Clostridium lentocellum DSM 5427]
Length = 743
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 152/403 (37%), Positives = 235/403 (58%), Gaps = 21/403 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ A+ AH Q+R SG+PY++H +E A LA + + + AGLLHD ++D
Sbjct: 23 EMVERAYQLAKSAHESQLRKSGEPYIIHPLEVACNLADLELDIESIVAGLLHDVVEDTDY 82
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I R F VA LV+GV+KL ++ A+ + ++A+ MFLAMA D R VL
Sbjct: 83 TLEDIERLFNKEVALLVDGVTKLGKIQYSAQNKQLQKEEIQAENYRKMFLAMAQDIRVVL 142
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ A+ETL I+ P+A+RLGI K LE+L +++ P+
Sbjct: 143 IKLADRLHNMQTLKFMTPAKQKEIAEETLNIYAPIAHRLGICKIKADLEDLSLRYMEPEV 202
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISF---LVLCGRHKSLYSIHCKMLKKKL 434
+ EL+ ++ E + IE + Q +K+K + V+ GR K +SI+ K++ K
Sbjct: 203 YYELAHQISSKRMERI--QYIEHIVQQIKEKVSAAGIEAVIEGRPKHFFSIYKKIVNKNK 260
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T+D+I+D++ +R IV++ +DCY L ++H+++ +PG+ KDYI PK N Y+SLHT + G
Sbjct: 261 TLDQIYDLFAVRAIVKSVKDCYGVLGIIHEMYTPIPGRFKDYIAMPKPNMYRSLHTTLMG 320
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS--FVLQMVEWARWVLTWQCE-- 550
E P E+QIRT+EMH AE+G AAHW+YKEG + + + W R +L WQ +
Sbjct: 321 EEGTPFEMQIRTEEMHRTAEYGIAAHWKYKEGKTDQGTQDKSEEKLTWLREILEWQRDMS 380
Query: 551 -------AMSKDRSCVGNGDSIKPP----CTFPSHADDCPFSY 582
A+ D G+ + P T P + F+Y
Sbjct: 381 DNQEFMSALKGDLDVYGDQVYVFTPSGELLTLPKGSTPIDFAY 423
>gi|217964330|ref|YP_002350008.1| GTP pyrophosphokinase [Listeria monocytogenes HCC23]
gi|290893882|ref|ZP_06556860.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|386008294|ref|YP_005926572.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|386026896|ref|YP_005947672.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404407961|ref|YP_006690676.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
gi|217333600|gb|ACK39394.1| GTP pyrophosphokinase (ATP:GTP 3-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Listeria
monocytogenes HCC23]
gi|290556599|gb|EFD90135.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J2-071]
gi|307571104|emb|CAR84283.1| GTP pyrophosphokinase [Listeria monocytogenes L99]
gi|336023477|gb|AEH92614.1| putative (p)ppGpp synthetase [Listeria monocytogenes M7]
gi|404242110|emb|CBY63510.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2376]
Length = 738
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|108804177|ref|YP_644114.1| (p)ppGpp synthetase I SpoT/RelA [Rubrobacter xylanophilus DSM 9941]
gi|108765420|gb|ABG04302.1| (p)ppGpp synthetase I, SpoT/RelA [Rubrobacter xylanophilus DSM
9941]
Length = 742
Score = 275 bits (703), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 154/360 (42%), Positives = 226/360 (62%), Gaps = 14/360 (3%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E+ + +A+ A AHRGQ R SG+P++LH + TA +LA + + T +AA LLHD L+D
Sbjct: 37 EELIAEAYNLAHAAHRGQRRRSGEPFILHPLATADILADLRMDPTTIAAALLHDVLEDTG 96
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
++ + + FGA VA++V+GV+KL +L E +A+ L M +AM+ D R +
Sbjct: 97 VTKEELAGRFGAEVAEIVDGVTKLKRLPSGNLEE------AQAESLRKMIVAMSRDVRVI 150
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
+IKLADRLHNM TL+ L + A ETLEI+ PLA+RLGI + K +LE+L F L+P
Sbjct: 151 IIKLADRLHNMRTLEYLKRETQLEKATETLEIYAPLAHRLGIYSLKWELEDLAFATLHPR 210
Query: 377 QHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ E+ + DE A +++ +L++ L + I V GR K YSI+ KM+++
Sbjct: 211 RYEEIKRLVAARRDEREAFISARAAELKRYLSEAGIEAEVR-GRVKHFYSIYNKMVRRNK 269
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT-VVT 493
+EI+D+ GLR+IV + DCY AL V+H +W +PG+ KDYI PKFN YQSLHT V++
Sbjct: 270 EFNEIYDLAGLRVIVGSVRDCYGALGVIHSVWKPIPGRFKDYIAMPKFNMYQSLHTTVMS 329
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
EG + LE+QIRT+EM AE+G AAHW YKEG ++ + W + ++ WQ E S
Sbjct: 330 NEGKL-LEIQIRTEEMDRTAEYGIAAHWMYKEGVGENGR--ADRLAWLKSMMEWQQETSS 386
>gi|46907751|ref|YP_014140.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|226224124|ref|YP_002758231.1| (p)ppGpp synthetase [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|254824418|ref|ZP_05229419.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|254852146|ref|ZP_05241494.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|254931458|ref|ZP_05264817.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|300764810|ref|ZP_07074800.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|386732261|ref|YP_006205757.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404281082|ref|YP_006681980.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404286945|ref|YP_006693531.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749867|ref|YP_006673333.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|405752743|ref|YP_006676208.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|405755681|ref|YP_006679145.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|406704296|ref|YP_006754650.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|417316063|ref|ZP_12102721.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|424714398|ref|YP_007015113.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
gi|424823285|ref|ZP_18248298.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|46881020|gb|AAT04317.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
F2365]
gi|225876586|emb|CAS05295.1| Putative (p)ppGpp synthetase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258605450|gb|EEW18058.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-503]
gi|293583010|gb|EFF95042.1| GTP pyrophosphokinase [Listeria monocytogenes HPB2262]
gi|293593653|gb|EFG01414.1| GTP pyrophosphokinase [Listeria monocytogenes FSL J1-194]
gi|300514486|gb|EFK41543.1| GTP pyrophosphokinase [Listeria monocytogenes FSL N1-017]
gi|328465560|gb|EGF36789.1| (p)ppGpp synthetase [Listeria monocytogenes J1816]
gi|332311965|gb|EGJ25060.1| GTP pyrophosphokinase [Listeria monocytogenes str. Scott A]
gi|384391019|gb|AFH80089.1| (p)ppGpp synthetase [Listeria monocytogenes 07PF0776]
gi|404219067|emb|CBY70431.1| GTP pyrophosphokinase [Listeria monocytogenes ATCC 19117]
gi|404221943|emb|CBY73306.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2378]
gi|404224881|emb|CBY76243.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2540]
gi|404227717|emb|CBY49122.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2755]
gi|404245874|emb|CBY04099.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361326|emb|CBY67599.1| GTP pyrophosphokinase [Listeria monocytogenes L312]
gi|424013582|emb|CCO64122.1| GTP pyrophosphokinase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 738
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|254994034|ref|ZP_05276224.1| (p)ppGpp synthetase [Listeria monocytogenes FSL J2-064]
Length = 711
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|242280235|ref|YP_002992364.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio salexigens DSM 2638]
gi|242123129|gb|ACS80825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio salexigens DSM
2638]
Length = 723
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 218/357 (61%), Gaps = 21/357 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ + RAH GQ+R SG+PYL H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSARAHEGQVRLSGEPYLAHPLHVAKLLADMRLDEPTVAAGLLHDTVEDTDT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAV 316
+ D I FG VAD+V+GV+K+S + + SK + +A+ + M LAMA D R +
Sbjct: 81 TIDEIADLFGEEVADIVDGVTKISMM-------DFESKAIAKAENIRKMILAMAEDIRVL 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TLD K+ A+ET++I+ PLANRLG+ K LE+LC +L PD
Sbjct: 134 MVKLADRLHNMRTLDFQKSYKQLLIAQETMDIYSPLANRLGLYMVKRDLEDLCLYYLKPD 193
Query: 377 QHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ +++ L + V + I L L + I + GR K +YSIH KM ++ L
Sbjct: 194 VYQDITDGLERQHTIGKEYVDNVIGLLNGILDNNEIKGTIY-GRTKHIYSIHKKMQRQNL 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++D+++DI R+IVE+ +DCY L +VH +W + GK KDYI+ PK N YQSLHT V G
Sbjct: 253 SLDQVYDIIAFRVIVESVKDCYSVLGLVHSMWKPISGKFKDYISIPKANMYQSLHTTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---------DCQHSSFVLQMVEWAR 542
+E+QIRT+EM AE+G AAHW+YKE D + S++ Q+++W R
Sbjct: 313 PEGERIEIQIRTEEMQQVAEYGVAAHWQYKESGRSDSKQNRDAERFSWLRQIMDWQR 369
>gi|402567278|ref|YP_006616623.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
gi|402248475|gb|AFQ48929.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cepacia GG4]
Length = 788
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/371 (39%), Positives = 220/371 (59%), Gaps = 17/371 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E+LA ++K V AF+ + AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPEEIKE-------VKAAFHFGDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
V A LLHD ++D ++ + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKSELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREK 289
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
++YSI+ KM K+L+ ++ D+YG R++VE+ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSIYRKMRDKQLSFSQVLDVYGFRVVVESPLDCYTCIGALHSLYKPVPGKFKDYIAIP 349
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 540
K NGYQSLHT + G P+E Q+RT++MH AE G AAHW YK G + + +W
Sbjct: 350 KINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQW 409
Query: 541 ARWVLTWQCEA 551
+ +L Q EA
Sbjct: 410 LKSLLDIQSEA 420
>gi|376001755|ref|ZP_09779611.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
gi|375329867|emb|CCE15364.1| bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Arthrospira sp.
PCC 8005]
Length = 764
Score = 275 bits (703), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGN 336
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE + + E W R +L WQ +
Sbjct: 337 TGRPVEVQIRTVEMHHIAEYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|317128220|ref|YP_004094502.1| (p)ppGpp synthetase I SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
gi|315473168|gb|ADU29771.1| (p)ppGpp synthetase I, SpoT/RelA [Bacillus cellulosilyticus DSM
2522]
Length = 726
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 212/353 (60%), Gaps = 11/353 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ AE AH+ Q R SG+PY+ H V+ A +L +G + +AA LHD ++D +
Sbjct: 21 FIKEAYEVAEVAHKEQFRKSGEPYIWHPVQVAGILVDLGMDPKTIAAAFLHDVVEDTDVK 80
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 81 LEDLANRFGNEVAMLVDGVTKLGKIKYKSKEEQ------QAENHRKMFVAMAKDIRVILI 134
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 135 KLADRLHNMRTLKHLPPEKQRRIANETLEIFAPLAHRLGISKIKWELEDTSLRYLNPQQY 194
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E + K+ + L+ + + GR K +YSI+ KM +
Sbjct: 195 YRIVNLMKKKRAEREDYIDEVQNKIRERLEGVGVQAGI-HGRAKHIYSIYRKMALQNKQF 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 NEIYDLLAVRIIVNSIKDCYAVLGIIHTQWKPMPGRFKDYIAMPKANMYQSLHTTVIGPK 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 548
PLEVQIR+++MH AEFG AAHW YKEG + L+ + W R +L WQ
Sbjct: 314 GDPLEVQIRSEDMHKVAEFGVAAHWAYKEGKTMKQNETLETKMSWFREILEWQ 366
>gi|47094426|ref|ZP_00232112.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
gi|47017201|gb|EAL08048.1| GTP pyrophosphokinase [Listeria monocytogenes str. 4b H7858]
Length = 724
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 13 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 72
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 73 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 126
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 127 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 186
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 187 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 245
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 246 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 305
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 306 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 361
>gi|167837498|ref|ZP_02464381.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|424903250|ref|ZP_18326763.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
gi|390931123|gb|EIP88524.1| GTP pyrophosphokinase [Burkholderia thailandensis MSMB43]
Length = 789
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 265/512 (51%), Gaps = 43/512 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 557
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEAGDSSEF 427
Query: 558 CVGNGDSIKPPCTF-----------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQE 606
+ P + P A F+Y + I N+ + ++
Sbjct: 428 LEHVKIDLFPDAVYVFTPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRT 487
Query: 607 FPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELT 663
S +++++ +PY P L KA R LK + + V+L
Sbjct: 488 ELKSGDIVEVIT---------APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLG 538
Query: 664 PAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 695
+ D+SL Y GLA+++ P V
Sbjct: 539 ERLVDQSLKGY----------GLALADVAPEV 560
>gi|16803563|ref|NP_465048.1| hypothetical protein lmo1523 [Listeria monocytogenes EGD-e]
gi|47097020|ref|ZP_00234593.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|254828243|ref|ZP_05232930.1| relA [Listeria monocytogenes FSL N3-165]
gi|254912197|ref|ZP_05262209.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|254936525|ref|ZP_05268222.1| relA [Listeria monocytogenes F6900]
gi|284801913|ref|YP_003413778.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284995055|ref|YP_003416823.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|386043834|ref|YP_005962639.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|386047175|ref|YP_005965507.1| relA [Listeria monocytogenes J0161]
gi|386050499|ref|YP_005968490.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|386053776|ref|YP_005971334.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404284015|ref|YP_006684912.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404410825|ref|YP_006696413.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|405758571|ref|YP_006687847.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|16410952|emb|CAC99601.1| relA [Listeria monocytogenes EGD-e]
gi|47014602|gb|EAL05562.1| GTP pyrophosphokinase [Listeria monocytogenes str. 1/2a F6854]
gi|258600631|gb|EEW13956.1| relA [Listeria monocytogenes FSL N3-165]
gi|258609119|gb|EEW21727.1| relA [Listeria monocytogenes F6900]
gi|284057475|gb|ADB68416.1| hypothetical protein LM5578_1668 [Listeria monocytogenes 08-5578]
gi|284060522|gb|ADB71461.1| hypothetical protein LM5923_1620 [Listeria monocytogenes 08-5923]
gi|293590170|gb|EFF98504.1| GTP pyrophosphokinase [Listeria monocytogenes J2818]
gi|345534166|gb|AEO03607.1| relA [Listeria monocytogenes J0161]
gi|345537068|gb|AEO06508.1| GTP pyrophosphokinase [Listeria monocytogenes 10403S]
gi|346424345|gb|AEO25870.1| GTP pyrophosphokinase [Listeria monocytogenes FSL R2-561]
gi|346646427|gb|AEO39052.1| GTP pyrophosphokinase [Listeria monocytogenes Finland 1998]
gi|404230651|emb|CBY52055.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC5850]
gi|404233517|emb|CBY54920.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2372]
gi|404236453|emb|CBY57855.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC2479]
gi|441471216|emb|CCQ20971.1| GTP pyrophosphokinase [Listeria monocytogenes]
gi|441474345|emb|CCQ24099.1| GTP pyrophosphokinase [Listeria monocytogenes N53-1]
Length = 738
Score = 275 bits (702), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|456386014|gb|EMF51567.1| relA protein [Streptomyces bottropensis ATCC 25435]
Length = 849
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/367 (42%), Positives = 217/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 134 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 193
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 194 LRRDFGDSVGLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 245
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 246 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 305
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 306 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 361
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 362 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 421
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R
Sbjct: 422 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRSDQPRTTGKDDHLNDMAWLRQ 481
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 482 LLDWQKE 488
>gi|398813763|ref|ZP_10572455.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
gi|398038063|gb|EJL31236.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. BC25]
Length = 723
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 206/333 (61%), Gaps = 14/333 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTEI 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D++ FG VA LV+GV+KL ++ ++E A + M +AMA D R ++
Sbjct: 82 TLDHLREQFGPDVALLVDGVTKLEKIKYKSKEEQLA------ENHRKMLVAMAQDIRVIM 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 378 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + K VE EA + A + + + L + NI + GR K +YSI KM ++
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTRQN 252
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVI 312
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLEVQIRT +MH AE G AAHW YKEG
Sbjct: 313 GPKGEPLEVQIRTWDMHQTAEIGIAAHWAYKEG 345
>gi|402571498|ref|YP_006620841.1| RelA/SpoT family (p)ppGpp synthetase [Desulfosporosinus meridiei
DSM 13257]
gi|402252695|gb|AFQ42970.1| (p)ppGpp synthetase, RelA/SpoT family [Desulfosporosinus meridiei
DSM 13257]
Length = 744
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 239/436 (54%), Gaps = 49/436 (11%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E L + K R V KA++ AE AHR Q+R SG+ Y+LH +E A +L + +
Sbjct: 5 ELLVKMKKKFPQSRLAIVDKAYHFAEVAHRNQLRNSGEDYILHPLEVAQILVELEMDEAT 64
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+AA LLHD ++D + I + FG+ +A LV+GV+KL ++ ++ + + L
Sbjct: 65 IAASLLHDVVEDTEFTIADIEKEFGSEIALLVDGVTKLGRIEYKSKVEQ------QVENL 118
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
MFLAMA D R +LIKLADRLHNM TL K++ A+ETLEIF PLANRLGI K
Sbjct: 119 RKMFLAMAKDIRVILIKLADRLHNMRTLKYHSEQKQKEIAQETLEIFAPLANRLGIFRIK 178
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+LE+L F++L P ++ +L L EA + I ++ + L + I F + GR K
Sbjct: 179 WELEDLSFRYLKPQEYYDLVEGIALKRREREAYINEVIVQMRERLDEVEI-FADIAGRPK 237
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
YSI+ KM + + EI+D+ +R+IV++ DCY AL ++H +W +PG+ KDYI P
Sbjct: 238 HFYSIYRKMTTQNKDLSEIYDLMAIRVIVDSVNDCYGALGIIHTMWKPIPGRFKDYIAMP 297
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-------------D 527
K N YQSLHT + G P E+QIRT EMH +E+G AAHW+YKEG D
Sbjct: 298 KPNMYQSLHTTLIGLHGEPFEIQIRTCEMHRTSEYGIAAHWKYKEGSNKECATKGSSGKD 357
Query: 528 CQHSSFVL---QMVEWARWVLTWQ---------CEAMSKDRSC------VGNGDSIKPPC 569
C + + + Q + W R +L WQ E++ D GD ++ P
Sbjct: 358 CGNKTTSVNFEQKLSWLRQLLEWQHDSRDAGEFMESLKIDLFADTVFVFTPKGDVVELP- 416
Query: 570 TFPSHADDCP--FSYK 583
AD CP F+Y+
Sbjct: 417 -----ADSCPVDFAYR 427
>gi|359143861|ref|ZP_09178076.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces sp. S4]
Length = 836
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 217/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 122 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 181
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 182 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 233
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 234 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 293
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 VRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 349
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 350 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 409
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 410 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKTGKEDAVNDMAWLRQ 469
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 470 LLDWQKE 476
>gi|410584315|ref|ZP_11321418.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
gi|410504250|gb|EKP93761.1| (p)ppGpp synthetase, RelA/SpoT family [Thermaerobacter subterraneus
DSM 13965]
Length = 732
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 217/353 (61%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D++ +AF + AH+GQ RASG ++ H + A++LA + ++ + A LLHDT++D +
Sbjct: 28 DWLRRAFEFGKAAHQGQKRASGQDFIEHPLAVALILADLELDAATLVAALLHDTVEDTEV 87
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + R FG+ VA LV+GV+KL+Q+ R +A+ L MFLAMA D R VL
Sbjct: 88 TLEQVEREFGSEVALLVDGVTKLNQIEWRTRLEE------QAENLRKMFLAMARDIRVVL 141
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K+ ++ETLEIF PLA+RLG+S + +LE+L ++L P++
Sbjct: 142 IKLADRLHNMRTLAVVPREKQIAKSRETLEIFAPLAHRLGMSQIQWELEDLALRYLEPER 201
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ELS ++ E + I L L + I + GR K YSI+ KM ++
Sbjct: 202 YRELSERIPRKRAEREELAQVIIRTLRAKLAEAGIRADI-QGRAKHFYSIYRKMYEQGKD 260
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +I+D+ +R+IV+ +DCY AL VVH +W +PG+ KDYI PK N YQSLHT V G
Sbjct: 261 LSQIYDLIAVRVIVDTVKDCYGALGVVHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGP 320
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT +MH AE+G AAHWRYKE F ++ W R VL WQ
Sbjct: 321 QGEPFEIQIRTWDMHRTAEYGIAAHWRYKERGRTDKDFDAKLA-WLRQVLEWQ 372
>gi|405983984|ref|ZP_11042289.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
gi|404388799|gb|EJZ83881.1| RelA/SpoT family protein [Slackia piriformis YIT 12062]
Length = 788
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 147/351 (41%), Positives = 213/351 (60%), Gaps = 10/351 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH+ Q R SG+P++ H +E A++LA + ++ + A LLHDT++D + +
Sbjct: 71 KAYRFASEAHKEQKRKSGEPFIAHPIEVALILADLRMDADTLCAALLHDTVEDTPTTVEE 130
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ F VA LV+GV+K++++ + + A+ + MF+AM+ D R ++IKLA
Sbjct: 131 VSELFNPQVAQLVQGVTKITRIEVGSLTDEQAAT------IRKMFVAMSKDIRVIVIKLA 184
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL AL +R A+ETLEI+ P+A+RLGI + K +LE+L F +L+P + ++
Sbjct: 185 DRLHNMRTLSALKEDRRIFKARETLEIYAPIAHRLGIGSIKWELEDLSFYYLDPAKFGQI 244
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S + E E + IE L L NI+ + GR K LYSI+ KM K+ EI
Sbjct: 245 SRMVAESRVERERYLADVIETLTGELTKVNITGHI-AGRPKHLYSIYQKMTKRGKGFSEI 303
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R+IV+ +DCY L VH LW +PG+ KDYI PK N YQSLHT V G P
Sbjct: 304 YDLIAVRVIVKTVKDCYSVLGAVHALWHPMPGRFKDYIAMPKLNMYQSLHTTVIGPSGRP 363
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
LEVQIRT+EMH +E+G AAHWRYKE + + + W R ++ WQ E
Sbjct: 364 LEVQIRTEEMHRMSEYGVAAHWRYKEKGSKADEAFDRQIAWLRQMVDWQEE 414
>gi|422809604|ref|ZP_16858015.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
gi|378753218|gb|EHY63803.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Listeria
monocytogenes FSL J1-208]
Length = 738
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|373857672|ref|ZP_09600413.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
gi|372452804|gb|EHP26274.1| RelA/SpoT family protein [Bacillus sp. 1NLA3E]
Length = 731
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 216/357 (60%), Gaps = 13/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A+ AHR Q R SG+PY++H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 EMVKKAYDFAKHAHRDQYRKSGEPYIIHPIQVAGILADLEMDPETVAAGFLHDVVEDTSV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + I F VA LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEDIKTAFNDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPFEKQRRISNETLEIFAPLAHRLGISKVKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + IE++ + + +I L GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKKKRAEREQYLVDVIEEVRARMGEVSIK-AELSGRPKHIYSIYRKMALQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH--SSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AEFG AAHW YKEG SS+ ++ W R +L +Q E
Sbjct: 319 KGDPLEVQIRTSEMHEIAEFGIAAHWAYKEGKSASDISSYEAKLT-WFREILEFQNE 374
>gi|226311469|ref|YP_002771363.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
gi|226094417|dbj|BAH42859.1| GTP pyrophosphokinase [Brevibacillus brevis NBRC 100599]
Length = 723
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 146/333 (43%), Positives = 206/333 (61%), Gaps = 14/333 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTEI 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D++ FG VA LV+GV+KL ++ ++E A + M +AMA D R ++
Sbjct: 82 TLDHLREQFGPDVALLVDGVTKLEKIKYKSKEEQLA------ENHRKMLVAMAQDIRVIM 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 378 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + K VE EA + A + + + L + NI + GR K +YSI KM ++
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTRQN 252
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVI 312
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLEVQIRT +MH AE G AAHW YKEG
Sbjct: 313 GPKGEPLEVQIRTWDMHQTAEIGIAAHWAYKEG 345
>gi|423062390|ref|ZP_17051180.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
gi|406716298|gb|EKD11449.1| (p)ppGpp synthetase I SpoT/RelA [Arthrospira platensis C1]
Length = 741
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 20 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 80 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 134 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 193
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 194 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 254 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGN 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE + + E W R +L WQ +
Sbjct: 314 TGRPVEVQIRTVEMHHVAEYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 371
>gi|421739510|ref|ZP_16177818.1| (p)ppGpp synthetase, RelA/SpoT family [Streptomyces sp. SM8]
gi|406692146|gb|EKC95859.1| (p)ppGpp synthetase, RelA/SpoT family [Streptomyces sp. SM8]
Length = 836
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 217/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 122 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 181
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 182 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 233
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 234 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 293
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 VRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 349
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 350 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 409
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 410 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRRTGKEDAVNDMAWLRQ 469
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 470 LLDWQKE 476
>gi|311031524|ref|ZP_07709614.1| GTP pyrophosphokinase [Bacillus sp. m3-13]
Length = 732
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 218/358 (60%), Gaps = 11/358 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ +A+ A+ AH Q R SG+PY++H ++ A +L + + + +AAG LHD ++D ++
Sbjct: 27 FLERAYEFAKNAHAEQYRKSGEPYIIHPIQVAGILVDLDLDPSTIAAGFLHDVVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I F A VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEEIKEAFNAEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E ++ + ++ L++ I+ L GR K +YSI+ KM K+
Sbjct: 201 YRIVNLMKRKRAEREEYISEVMNEVNDRLEEVEIT-AELSGRPKHIYSIYRKMAKQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 SEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEAMS 553
PLEVQIRT +MH AE+G AAHW YKE + + + + W R +L WQ +A +
Sbjct: 320 GDPLEVQIRTSDMHQIAEYGIAAHWAYKEDKEADDRASFEEKLTWFREILEWQNDATN 377
>gi|91774406|ref|YP_544162.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
gi|91708393|gb|ABE48321.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Methylobacillus flagellatus KT]
Length = 740
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 220/356 (61%), Gaps = 10/356 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + A+ + AH GQ+R SG+PY+ H V A +LA + + + A LLHD ++D +
Sbjct: 42 DHIWDAYRFSAAAHEGQVRRSGEPYVTHPVSVAGILAELHLDPPTLIAALLHDVVEDTGV 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ I FG VA+LV+G+SKL ++ E +A++ +A+ M LAM+ D R +L
Sbjct: 102 TKQEISDRFGKQVAELVDGLSKLDKI-----EFQSATQA-QAENFRKMLLAMSQDVRVIL 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TLD + K++R A+ETL+I+ P+ANRLG++ LE+L FK+L P +
Sbjct: 156 VKLADRLHNMSTLDVMKPEKQRRIARETLDIYAPIANRLGLNEIYQTLEDLSFKYLYPMR 215
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
H +S ++ + +V ++ + Q LK++NI V GR K LYSI+ KM K +T
Sbjct: 216 HRVISKAVMAARGNRKEVVGKILDAINQRLKEQNIEAEV-TGREKHLYSIYKKMTGKTIT 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+I+DIYG R+IV + CY AL V+H L+ +PGK KDYI PK NGYQSLHT + G
Sbjct: 275 FSQIYDIYGFRVIVRDLPTCYAALGVLHGLYKPIPGKFKDYIAIPKANGYQSLHTTLFGP 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIR++EMH A+ G AAHW YK D ++ Q +W + +L Q E+
Sbjct: 335 FGTPIEIQIRSREMHNIADAGVAAHWLYKTTDAHLTALQQQTHQWLQRLLDIQSES 390
>gi|363420442|ref|ZP_09308534.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus pyridinivorans AK37]
gi|359735684|gb|EHK84641.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus pyridinivorans AK37]
Length = 770
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 215/355 (60%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 69 RAYDVAEERHASQKRKSGDPYITHPLAVATILAELGMDTTTLVAALLHDTVEDTGYTLEQ 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 129 LTAEFGEEVAHLVDGVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVA 180
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 181 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEI 240
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + + +++ + L I V+ GR K +SI+ KM+ K D+
Sbjct: 241 V-RLVATRAPSRDTYLATVRDEIGRTLSASRID-AVVEGRPKHYWSIYQKMIVKGRDFDD 298
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++ DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G
Sbjct: 299 IHDLVGVRILCNEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGK 358
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 359 PLEVQIRTHEMHRTAEFGIAAHWRYKETKGRHSGDVAELDDMAWMRQLLDWQREA 413
>gi|416938722|ref|ZP_11934326.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
gi|325524709|gb|EGD02697.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. TJI49]
Length = 788
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 170/512 (33%), Positives = 264/512 (51%), Gaps = 43/512 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPTEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YS++ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILEAAQRAMSDAKIDAEI-TGREKTIYSVYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VEN DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVENPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLGGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRS 557
P+E Q+RT++MH AE G AAHW YK G S + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLSDVQKRAHQWLKSLLDIQSEAGDSSEF 426
Query: 558 CVGNGDSIKPPCTF-----------PSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQE 606
+ P + P A F+Y + I N+ + ++
Sbjct: 427 LEHVKIDLFPDAVYVFTPKSKIMALPRGATALDFAYSIHSDLGNQCVAVKINNELLPLRT 486
Query: 607 FPTSSTVMDLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLK---MGDVVELT 663
S +++++ +PY P L KA R LK + + V+L
Sbjct: 487 ELKSGDIVEVIT---------APYSKPNPAWLGFVRTGKARSAIRHYLKTMRLNESVQLG 537
Query: 664 PAIPDKSLTEYREEIQRMYERGLAVSNTGPAV 695
+ D+SL Y GL++++ GP V
Sbjct: 538 ERLVDQSLKGY----------GLSLADVGPEV 559
>gi|83719914|ref|YP_442129.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|167581000|ref|ZP_02373874.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis TXDOH]
gi|167619077|ref|ZP_02387708.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis Bt4]
gi|257138317|ref|ZP_05586579.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
gi|83653739|gb|ABC37802.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia thailandensis E264]
Length = 789
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|398342460|ref|ZP_10527163.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
inadai serovar Lyme str. 10]
Length = 674
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 169/466 (36%), Positives = 252/466 (54%), Gaps = 46/466 (9%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ +E AH+GQ R SG+PY++H ++ +L +G + V++AG+LHD ++D
Sbjct: 27 ELVEKAYKVSEEAHQGQFRLSGEPYIVHPLQVGYILYELGLDEKVISAGILHDVIEDTKY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVL 317
+ D + FG + LVEGV+K+S++ +RE T A+ + + +A + D R +L
Sbjct: 87 TRDNMVSDFGTEITQLVEGVTKISEIKSQSRE------TEAAENIRKIIIATIQDIRVIL 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLAD+ HNM TL P K++R A ETL ++ P+A RLGI K +LE+L F+ + P++
Sbjct: 141 IKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAGRLGIYKVKSELEDLAFQVIYPEE 200
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKK 433
+ ++ ++ ++ I+KL+ LK + NI+ V GR K +SI+ KM K+
Sbjct: 201 YQDIKKRI--NVKKSEREEYIDKLQIILKQRLAEININAQV-DGRAKHFFSIYRKMKTKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T DEI D+ +R+I + +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFDEIFDLRAIRIITDEIKDCYGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT EM+ AEFG AAHW YKEG H++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTAEMNAIAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +TV
Sbjct: 372 ---------DSALDPKEF---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATV 411
Query: 614 MDLLERAGRG------SSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D R ++ + PL+ ELR + V D R K
Sbjct: 412 LDFAFRIHTDVGLHCKGAKINSRMIPLRTELRSGDQVEVVVDKRSK 457
>gi|315282436|ref|ZP_07870851.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
gi|313613919|gb|EFR87648.1| GTP diphosphokinase [Listeria marthii FSL S4-120]
Length = 738
Score = 275 bits (702), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|357057600|ref|ZP_09118458.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
gi|355374848|gb|EHG22139.1| hypothetical protein HMPREF9334_00175 [Selenomonas infelix ATCC
43532]
Length = 743
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 146/356 (41%), Positives = 219/356 (61%), Gaps = 19/356 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AE+AH GQ+R SGD Y++H + A +L + + + A LLHD ++D + +
Sbjct: 32 KAYDCAEKAHSGQVRISGDAYIVHPLNVAYILTGLHLDDETICAALLHDVVEDTCATLEE 91
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG + +L++GV+KL ++ +++E+ V+ + MFLAMA D R ++IKLA
Sbjct: 92 MDAEFGRNIMELIDGVTKLGRIEYMSKED------VKLENYRKMFLAMAKDIRVIMIKLA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + KRQR AKET+E++ PLANRLGIS+ KV+LE+LC ++L P+ + L
Sbjct: 146 DRLHNMRTLKYMREDKRQRIAKETIEVYAPLANRLGISSIKVELEDLCLRYLEPEAYYAL 205
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E + +I ++ + L+ I + GR K YSI+ KM + ++ EI
Sbjct: 206 VEEVKHKRQERQEFIRESIRQIREKLEAAGIEAEI-KGRAKHFYSIYRKMKRDNKSVSEI 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R++V + +DCY L V+H +W +PG+ KDYI PK NGYQSLHT V G P
Sbjct: 265 YDLSAVRVLVSSVKDCYGVLGVIHAMWKPIPGRFKDYIAMPKSNGYQSLHTTVMTHG-DP 323
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE-----GDCQHSSFVLQMVEWARWVLTWQCE 550
LE+QIRTK MH +EFG AAHW+YKE G + Q + W R +++ Q E
Sbjct: 324 LEIQIRTKAMHQVSEFGVAAHWKYKEAGRSIGATDEND---QKMSWLRQMVSLQKE 376
>gi|337290887|ref|YP_004629908.1| GTP pyrophosphokinase [Corynebacterium ulcerans BR-AD22]
gi|334699193|gb|AEG83989.1| GTP pyrophosphokinase [Corynebacterium ulcerans BR-AD22]
Length = 759
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QAL++ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 229 VRLVADRAPSRDRYLKEITSQLQQALRENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 288 FDLVGIRILVDSINNCYAAIGVVHALYAAMPGRFKDYISSPKFGVYQSLHTTVMGDEGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|433647464|ref|YP_007292466.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium smegmatis
JS623]
gi|433297241|gb|AGB23061.1| (p)ppGpp synthetase, RelA/SpoT family [Mycobacterium smegmatis
JS623]
Length = 782
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 149/366 (40%), Positives = 216/366 (59%), Gaps = 35/366 (9%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AE H QMR SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 78 KAYEVAEERHADQMRRSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTMEQ 137
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ +A+ + M +AMA D R ++IK+A
Sbjct: 138 LTADFGEEVAHLVDGVTKLDRVA--------LGTAADAETIRKMIIAMARDGRVLVIKVA 189
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 190 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 249
Query: 382 -----------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ L + DE T K+ ++ GR K +SI+ KM+
Sbjct: 250 VRLVADRAPSRDTYLAKVRDEITSTLNASKINADVE----------GRPKHYWSIYQKMI 299
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
K D+IHD+ G+R++ + DCY A+ VVH LW +PG+ KDYI +P++ YQSLHT
Sbjct: 300 VKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMPGRFKDYIAQPRYGVYQSLHT 359
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-----HSSFVLQMVEWARWVL 545
V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +L
Sbjct: 360 TVVGPEGKPLEVQIRTRDMHTTAEYGIAAHWRYKETKGRNAPHPHAAAEIDDMAWMRQLL 419
Query: 546 TWQCEA 551
WQ EA
Sbjct: 420 DWQREA 425
>gi|107022080|ref|YP_620407.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116689024|ref|YP_834647.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|254246040|ref|ZP_04939361.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
gi|105892269|gb|ABF75434.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia AU 1054]
gi|116647113|gb|ABK07754.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia HI2424]
gi|124870816|gb|EAY62532.1| RelA/SpoT protein [Burkholderia cenocepacia PC184]
Length = 788
Score = 275 bits (702), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 222/371 (59%), Gaps = 17/371 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 540
K NGYQSLHT + G P+E Q+RT++MH AE G AAHW YK G S + +W
Sbjct: 350 KINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIAEAGVAAHWLYKNGSADLSDVQKRAHQW 409
Query: 541 ARWVLTWQCEA 551
+ +L Q EA
Sbjct: 410 LKSLLDIQSEA 420
>gi|336320698|ref|YP_004600666.1| (p)ppGpp synthetase I, SpoT/RelA [[Cellvibrio] gilvus ATCC 13127]
gi|336104279|gb|AEI12098.1| (p)ppGpp synthetase I, SpoT/RelA [[Cellvibrio] gilvus ATCC 13127]
Length = 775
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 153/371 (41%), Positives = 216/371 (58%), Gaps = 15/371 (4%)
Query: 186 LANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVA 245
L A+ H V +A+ AERAHRGQ+R SGDPY+ H V A +LA +G + +
Sbjct: 50 LQAARANHPKADLTVVERAYVVAERAHRGQLRKSGDPYITHPVAVATILAELGMTPSTLV 109
Query: 246 AGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHT 305
A LLHDT++D S D + R FG VA LV+GV+KL +++ +A+ +
Sbjct: 110 AALLHDTVEDTEYSLDQLRREFGPEVAMLVDGVTKLDKVAY--------GDAAQAETVRK 161
Query: 306 MFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQ 364
M +AMA D R ++IKLADRLHN T +P ++ A+ETLEI+ PLA+RLG++T K +
Sbjct: 162 MVVAMARDIRVLVIKLADRLHNARTWRFVPAASAEKKARETLEIYAPLAHRLGMNTIKWE 221
Query: 365 LENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSL 422
LE+L F L P + E+ + E E + +++ L+ I V GR K
Sbjct: 222 LEDLSFATLYPKVYDEIVRLVAERAPAREEYLAVVRDQVGADLRAAKIKATV-TGRPKHY 280
Query: 423 YSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKF 482
YSI+ KM+ + +I+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKF
Sbjct: 281 YSIYQKMIVRGRDFADIYDLVGVRVLVDTVRDCYAALGALHARWNPVPGRFKDYIAMPKF 340
Query: 483 NGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVE 539
N YQSLHT V G G P+E+QIRT +MH +AE+G AAHW+YKE G + +
Sbjct: 341 NLYQSLHTTVIGPGGKPVEIQIRTHDMHRRAEYGVAAHWKYKENAKGAPATEAPAGGDMA 400
Query: 540 WARWVLTWQCE 550
W R ++ WQ E
Sbjct: 401 WLRQLVDWQKE 411
>gi|377560470|ref|ZP_09789973.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
gi|377522332|dbj|GAB35138.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia otitidis NBRC 100426]
Length = 812
Score = 274 bits (701), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 215/358 (60%), Gaps = 20/358 (5%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ A+ HRGQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D + + +
Sbjct: 108 AYDVADERHRGQKRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYTLEAL 167
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+AD
Sbjct: 168 ESEFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVAD 219
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 220 RLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEIV 279
Query: 383 SKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + + + + AL I+ V GR K +SI+ KM+ K D+IH
Sbjct: 280 RLVADRAPSRDTYLARVRADINNALSSAKITATV-EGRPKHYWSIYQKMIVKGRDFDDIH 338
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ G+R++ ++ DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G PL
Sbjct: 339 DLVGMRILCDDVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKPL 398
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKE-------GDCQHSSFVLQMVEWARWVLTWQCEA 551
EVQIRT +MH AEFG AAHWRYKE G ++ + M W R +L WQ EA
Sbjct: 399 EVQIRTNDMHRTAEFGIAAHWRYKESGYRDRKGRKSDAAEIDDMA-WMRQLLDWQREA 455
>gi|430750699|ref|YP_007213607.1| RelA/SpoT family (p)ppGpp synthetase [Thermobacillus composti KWC4]
gi|430734664|gb|AGA58609.1| (p)ppGpp synthetase, RelA/SpoT family [Thermobacillus composti
KWC4]
Length = 730
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 171/462 (37%), Positives = 252/462 (54%), Gaps = 45/462 (9%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ A AH+GQ+R SG+PY+ H V A +L + + T A LLHD ++D ++ D +
Sbjct: 25 AYQFAAEAHKGQVRKSGEPYIEHPVAVAEILVNMQMDVTSAVAALLHDVVEDTNVTLDDL 84
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
FG +A LV+G++KL ++ ++E + + MF+AMA D R +LIKLAD
Sbjct: 85 RERFGETLAMLVDGLTKLERIQFRSKEEQ------QNENYRKMFVAMAQDIRVILIKLAD 138
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM TL ++R A ETLEI+ P+A+RLG+S K ++E++ ++LNP Q+ ++
Sbjct: 139 RLHNMRTLKFQSEEAQRRIAHETLEIYCPIAHRLGMSAIKWEMEDIALRYLNPQQYYRIA 198
Query: 383 SKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIH 440
+ + + E + IE++ + L + I + GR K +YSI+ KM +K +EI+
Sbjct: 199 NLMQKKRAEREQYIADVIERIREKLAEMGIQGDI-SGRPKHIYSIYKKMTEKNKQFNEIY 257
Query: 441 DIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPL 500
D+ +R+IV+N +DCY L ++H LW +PG+ KDYI PK N YQSLHT V G PL
Sbjct: 258 DLLAIRIIVDNLKDCYATLGIIHTLWRPMPGRFKDYIAMPKANMYQSLHTTVIGPNGEPL 317
Query: 501 EVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVG 560
EVQIRT EMH +E+G AAHW YKEG ++ + V+W R +L Q EA R
Sbjct: 318 EVQIRTWEMHRTSEYGIAAHWAYKEGQTNPNAGFGEKVKWFREILDLQNEA----RDAAE 373
Query: 561 NGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDLLERA 620
+S+K F S D F + P+ G VF E P S +D R
Sbjct: 374 FMESLK--MDFFS---DLVFVFSPK----GEVF------------ELPAGSVPLDFAYRV 412
Query: 621 GRGSSRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVEL 662
+ G + + P L+H KLK GD+VE+
Sbjct: 413 HTEVGNRT-IGAKVNGRIVP-LDH--------KLKTGDIVEI 444
>gi|53720172|ref|YP_109158.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|53726018|ref|YP_103668.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|67643935|ref|ZP_00442678.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|76811711|ref|YP_334422.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121601566|ref|YP_992160.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124383450|ref|YP_001028605.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126439987|ref|YP_001059962.1| GTP pyrophosphokinase [Burkholderia pseudomallei 668]
gi|126449677|ref|YP_001081496.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|126452109|ref|YP_001067254.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|134280234|ref|ZP_01766945.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|166998290|ref|ZP_02264150.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|167720739|ref|ZP_02403975.1| GTP pyrophosphokinase [Burkholderia pseudomallei DM98]
gi|167739720|ref|ZP_02412494.1| GTP pyrophosphokinase [Burkholderia pseudomallei 14]
gi|167816924|ref|ZP_02448604.1| GTP pyrophosphokinase [Burkholderia pseudomallei 91]
gi|167825327|ref|ZP_02456798.1| GTP pyrophosphokinase [Burkholderia pseudomallei 9]
gi|167846829|ref|ZP_02472337.1| GTP pyrophosphokinase [Burkholderia pseudomallei B7210]
gi|167895420|ref|ZP_02482822.1| GTP pyrophosphokinase [Burkholderia pseudomallei 7894]
gi|167903805|ref|ZP_02491010.1| GTP pyrophosphokinase [Burkholderia pseudomallei NCTC 13177]
gi|167912071|ref|ZP_02499162.1| GTP pyrophosphokinase [Burkholderia pseudomallei 112]
gi|167920045|ref|ZP_02507136.1| GTP pyrophosphokinase [Burkholderia pseudomallei BCC215]
gi|226193783|ref|ZP_03789385.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237813378|ref|YP_002897829.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|242318111|ref|ZP_04817127.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|254181032|ref|ZP_04887630.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|254191878|ref|ZP_04898381.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|254196051|ref|ZP_04902476.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|254202366|ref|ZP_04908729.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|254207700|ref|ZP_04914050.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|254298848|ref|ZP_04966298.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|254356400|ref|ZP_04972676.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|386860855|ref|YP_006273804.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403519675|ref|YP_006653809.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
gi|418398307|ref|ZP_12971896.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|418533325|ref|ZP_13099192.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|418540114|ref|ZP_13105677.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|418546364|ref|ZP_13111584.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|418557416|ref|ZP_13122011.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|52210586|emb|CAH36569.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia pseudomallei K96243]
gi|52429441|gb|AAU50034.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 23344]
gi|76581164|gb|ABA50639.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1710b]
gi|121230376|gb|ABM52894.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei SAVP1]
gi|124291470|gb|ABN00739.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10229]
gi|126219480|gb|ABN82986.1| GTP diphosphokinase [Burkholderia pseudomallei 668]
gi|126225751|gb|ABN89291.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106a]
gi|126242547|gb|ABO05640.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei NCTC 10247]
gi|134248241|gb|EBA48324.1| GTP pyrophosphokinase [Burkholderia pseudomallei 305]
gi|147746613|gb|EDK53690.1| GTP pyrophosphokinase [Burkholderia mallei FMH]
gi|147751594|gb|EDK58661.1| GTP pyrophosphokinase [Burkholderia mallei JHU]
gi|148025397|gb|EDK83551.1| GTP pyrophosphokinase [Burkholderia mallei 2002721280]
gi|157809170|gb|EDO86340.1| GTP pyrophosphokinase [Burkholderia pseudomallei 406e]
gi|157939549|gb|EDO95219.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pasteur 52237]
gi|169652795|gb|EDS85488.1| GTP pyrophosphokinase [Burkholderia pseudomallei S13]
gi|184211571|gb|EDU08614.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1655]
gi|225934088|gb|EEH30073.1| GTP pyrophosphokinase [Burkholderia pseudomallei Pakistan 9]
gi|237505941|gb|ACQ98259.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((p)ppGpp synthetase) [Burkholderia
pseudomallei MSHR346]
gi|238525404|gb|EEP88832.1| GTP pyrophosphokinase [Burkholderia mallei GB8 horse 4]
gi|242141350|gb|EES27752.1| GTP pyrophosphokinase [Burkholderia pseudomallei 1106b]
gi|243065365|gb|EES47551.1| GTP pyrophosphokinase [Burkholderia mallei PRL-20]
gi|385361360|gb|EIF67245.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026a]
gi|385362697|gb|EIF68504.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258a]
gi|385364782|gb|EIF70489.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1258b]
gi|385365058|gb|EIF70755.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354e]
gi|385366377|gb|EIF72000.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 354a]
gi|385657983|gb|AFI65406.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia pseudomallei 1026b]
gi|403075318|gb|AFR16898.1| GTP pyrophosphokinase [Burkholderia pseudomallei BPC006]
Length = 789
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|384515799|ref|YP_005710891.1| GTP pyrophosphokinase [Corynebacterium ulcerans 809]
gi|397654144|ref|YP_006494827.1| GTP pyrophosphokinase [Corynebacterium ulcerans 0102]
gi|334697000|gb|AEG81797.1| GTP pyrophosphokinase [Corynebacterium ulcerans 809]
gi|393403100|dbj|BAM27592.1| GTP pyrophosphokinase [Corynebacterium ulcerans 0102]
Length = 759
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 222/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QAL++ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 229 VRLVADRAPSRDRYLKEITSQLQQALRENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH L+A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 288 FDLVGIRILVDSINNCYAAIGVVHALYAAMPGRFKDYISSPKFGVYQSLHTTVMGDEGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|311739550|ref|ZP_07713385.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305366|gb|EFQ81434.1| GTP diphosphokinase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 762
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 219/360 (60%), Gaps = 18/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AER H G R SG+PY+ H + A + A IG ++T + A LLHDT++D
Sbjct: 52 DLLNRAYDTAERLHEGVFRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDY 111
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++
Sbjct: 112 SLEDLTRDFGPEVARLVDGVTKLDKVA--------LGSAAEAETIRKMIVAMATDPRVLV 163
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IK++DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P +
Sbjct: 164 IKVSDRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKK 223
Query: 378 HTELSSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ + + D A+ I ++ ALK+ I V+ GR K +SI+ KM+ +
Sbjct: 224 YDEIVRMVADRAPSRDRAL-KEIISQVSGALKENGIEAEVM-GRPKHYWSIYQKMIVRGR 281
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ G+R++VE+ CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V
Sbjct: 282 DFAEIFDLVGIRILVEDVNSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLA 341
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 551
+G LEVQ+RT EMH AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 342 DGGATLEVQVRTHEMHYNAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 400
>gi|386740500|ref|YP_006213680.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 31]
gi|384477194|gb|AFH90990.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 31]
Length = 763
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 61 RAYTTAEHLHEGVFRKSGDPYITHPLAVATITAEIGMDTTTLVAALLHDTVEDTEYSLED 120
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 121 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 172
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 173 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 232
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 233 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 291
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 292 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 351
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 352 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|407646893|ref|YP_006810652.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
gi|407309777|gb|AFU03678.1| GTP pyrophosphokinase [Nocardia brasiliensis ATCC 700358]
Length = 795
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 218/354 (61%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A+ H+ Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 94 RAFDVADERHKHQFRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEQ 153
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ A EA+ + M +AMA D R ++IK+A
Sbjct: 154 LTLDFGPEVAHLVDGVTKLDKVNLGA--------AAEAETIRKMIIAMARDPRVLVIKVA 205
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 206 DRLHNMRTMRFLPPEKQAKKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEI 265
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ +V GR K +SI+ KM+ K D+I
Sbjct: 266 VRLVADRAPSRDTYLAKVRAEIVNTLAASRINAIV-EGRPKHYWSIYQKMIVKGKDFDDI 324
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 325 HDLVGIRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPDGKP 384
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +HS+ ++ + W R +L WQ EA
Sbjct: 385 LEVQIRTQDMHRTAEFGIAAHWRYKETRGKHSNDSTEVDDMAWMRQLLDWQREA 438
>gi|284105197|ref|ZP_06386190.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
gi|283830148|gb|EFC34409.1| Guanosine polyphosphate pyrophosphohydrolase/synthetase [Candidatus
Poribacteria sp. WGA-A3]
Length = 728
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 169/428 (39%), Positives = 239/428 (55%), Gaps = 43/428 (10%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E + +A+ + +AH GQ R SG+PYL H V A +L + + T + AGLLHDTL+D
Sbjct: 25 EALLRRAYAFSAKAHEGQTRRSGEPYLQHPVAVAGILTFLKLDVTAIVAGLLHDTLEDTV 84
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 316
+ + + FG VA LVEGV+K+ Q+ E +A+ M L+MAD R V
Sbjct: 85 ATQEELQTHFGHEVAHLVEGVTKIGQIPFRTYEEK------QAENFRKMLLSMADDIRVV 138
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
IKLADRLHNM TL LP K+++ A+ETLEI+ PLANRLG+S K +LE+LCF++L +
Sbjct: 139 FIKLADRLHNMRTLGHLPEDKQKQIAQETLEIYSPLANRLGMSWLKQELEDLCFQYLKTE 198
Query: 377 QHTELSSKLVECFDEAMVT--SAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ L ++ + +E V+ S I++ AL + V+ GR K LYSIH KM + +
Sbjct: 199 AYSLLKLRVAQRDEERQVSVQSIIQETVDALAAAELPGHVV-GRPKHLYSIHQKMESQGI 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T +E+HD+ +R+I + +CY L +VH LW VPG+ KDYI P+ N YQSLHT V G
Sbjct: 258 TFEEVHDLVAIRIITGTKSNCYTILGLVHSLWPPVPGRFKDYIATPRTNLYQSLHTTVLG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEWARWVLTWQ 548
+E QIRT+EMH AE+G AAHWRYKE D + S++ Q VEW +
Sbjct: 318 PQGDHVEFQIRTEEMHRLAEYGVAAHWRYKEQVKVDDRDEKVFSWLRQFVEWHK------ 371
Query: 549 CEAMSKDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFP 608
+S +R + DS+K D F++ P K V+E P
Sbjct: 372 --DLSDNRQFM---DSVKLDLFHLDVFHDVVFAFTP----------------KGEVKELP 410
Query: 609 TSSTVMDL 616
+T +D
Sbjct: 411 LGATPVDF 418
>gi|217420352|ref|ZP_03451857.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
gi|217395764|gb|EEC35781.1| GTP diphosphokinase [Burkholderia pseudomallei 576]
Length = 789
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAVKAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|39997334|ref|NP_953285.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|409912678|ref|YP_006891143.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
gi|39984225|gb|AAR35612.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens PCA]
gi|298506271|gb|ADI84994.1| GTP/GDP 3'-pyrophosphokinase and (p)ppGpp 3'-pyrophosphohydrolase
[Geobacter sulfurreducens KN400]
Length = 716
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 217/356 (60%), Gaps = 13/356 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + H+GQ R SG+PYL+H +E A +LA + + V GLLHDT++D
Sbjct: 21 DLIRKAYVYCAKVHQGQTRLSGEPYLVHPMEVAGVLADLKLDVPTVVTGLLHDTIEDTLT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA VA+LV+GV+K+ ++ +E + +A+ M LAMA D R +L
Sbjct: 81 TREELEGMFGAEVANLVDGVTKIGKIHFKTKEES------QAENFRKMLLAMANDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL P K++ ++ETL+I+ PLANRLGIS K +LE+L F++L P
Sbjct: 135 VKLADRLHNMRTLQYQPEPKQRSISRETLDIYAPLANRLGISWIKSELEDLSFRYLEPQI 194
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKL 434
+ +L+SK+ + E S +E++ Q + K + + GR K LYSI KM + +
Sbjct: 195 YYDLASKVAKKKKER--ESYVEEVRQIIVSKLAEHDLKGDVFGRSKHLYSIWRKMQARNV 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+D+I+D+ +R++V + +CY+ L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 DIDQIYDLVAIRVMVNDIRECYEVLGIIHSTWKPIPGRFKDYIAMPKGNMYQSLHTTVIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
+EVQIRT +MH AE G AAHW+YKEG V + W R +L WQ E
Sbjct: 313 PHGERMEVQIRTSDMHRVAEAGIAAHWKYKEGKGYDEKEVKRFA-WLRQLLEWQQE 367
>gi|297588487|ref|ZP_06947130.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
gi|297573860|gb|EFH92581.1| GTP diphosphokinase [Finegoldia magna ATCC 53516]
Length = 723
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/353 (39%), Positives = 212/353 (60%), Gaps = 10/353 (2%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ RAH GQ R SG+PY +H + A +LA++ + + AGL HD ++D +
Sbjct: 25 DEITRAYGYMVRAHEGQFRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEI 84
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + F +ADLV+GV+KL Q+ +++N +A+ L M LAMA D R ++
Sbjct: 85 TYEDLEYLFSKEIADLVDGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVII 138
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL+ + K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+
Sbjct: 139 IKLSDRLHNMRTLEYMTREKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNI 198
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ +K+ E E+ + + I + + L+ NI + GR KS++SI+ KM KK L
Sbjct: 199 YQDIVNKINETRQQRESQIQNIIRQFQDELEKYNIKAEIF-GRPKSVFSIYKKMYKKHLA 257
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI D+ +R+IV E +CY L + H+ + +P KDYI PK N YQSLHT +
Sbjct: 258 FEEIKDLSAIRVIVNKESECYDVLGIAHRFFRPIPNTFKDYIATPKPNMYQSLHTTILAH 317
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
E+QIRT EMH +E+G AAHW+YKEG S + W R ++ WQ
Sbjct: 318 DGRTYEIQIRTWEMHKTSEYGIAAHWKYKEGTTNKKSKYDSKLAWLREIMDWQ 370
>gi|347753839|ref|YP_004861403.1| (p)ppGpp synthetase RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
gi|347586357|gb|AEP10887.1| (p)ppGpp synthetase, RelA/SpoT family [Candidatus
Chloracidobacterium thermophilum B]
Length = 731
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/355 (40%), Positives = 225/355 (63%), Gaps = 15/355 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ + + H+GQ+R SG+PYL+H + A +LA + + V GLLHD ++D +
Sbjct: 21 DLLRRAYLLSAQMHKGQVRKSGEPYLMHPLAVAYILAEMRLDVICVTTGLLHDVVEDTHV 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVL 317
+ + + + FG +A LV+G++K+S + +RE+ +A+ + M LAM D R VL
Sbjct: 81 TLEELEQQFGPEIAHLVDGLTKISNIEYTSREDR------QAETVRKMLLAMVDDIRVVL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TLD LP KR A+ETL+I+ P+A+RLG+ + +LE+L F++L PD
Sbjct: 135 VKLADRLHNMRTLDYLPPEKRAAKAQETLDIYAPIAHRLGMGKIRGELEDLSFQYLYPDD 194
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ L S L + EA + L++ L + N+ + + GR K LYS++ K+ ++ ++
Sbjct: 195 YQHLKSILDQRRPALEADLAHVRATLQEKLPEHNVKVVEIQGRIKRLYSLYRKLKERAIS 254
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+D+++D+ +R+I ++ DCY A+ VVH +W +PG+ KD+I P+ N YQSLHT V G+
Sbjct: 255 IDQVYDLMAVRVITQDIADCYAAVGVVHNIWKPIPGRFKDWIGIPRNNLYQSLHTSVVGD 314
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEWARWV 544
P EVQIRT EMH AE G AAHWRYKEG D + +++ ++VEW + V
Sbjct: 315 IGHPFEVQIRTAEMHKIAEEGIAAHWRYKEGRSAVKEDPETYAWLKRLVEWQQEV 369
>gi|384506865|ref|YP_005683534.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis C231]
gi|384508952|ref|YP_005685620.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis I19]
gi|385807648|ref|YP_005844045.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 267]
gi|387140761|ref|YP_005696739.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|302206299|gb|ADL10641.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis C231]
gi|308276541|gb|ADO26440.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis I19]
gi|355392552|gb|AER69217.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1/06-A]
gi|383805041|gb|AFH52120.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 267]
Length = 759
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 228
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 229 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 288 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|170732313|ref|YP_001764260.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia cenocepacia MC0-3]
gi|169815555|gb|ACA90138.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia cenocepacia MC0-3]
Length = 788
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/371 (39%), Positives = 222/371 (59%), Gaps = 17/371 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E+LA ++K V AF+ ++ AH GQ R SG+PY+ H V A + A ++
Sbjct: 64 EYLAPDEIKE-------VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQA 116
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
V A LLHD ++D ++ + + FG VA+LV+G+SKL ++ +RE +A+
Sbjct: 117 VMAALLHDVMEDQGVTKNELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENF 170
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
M LAMA D R +L+KLADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++
Sbjct: 171 RKMLLAMARDVRVILVKLADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTY 230
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+L+++ F + NP ++ L K +++ +E ++A+ D I + GR K
Sbjct: 231 RELQDMSFANFNPHRYATLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREK 289
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
++YS++ KM K+L+ ++ D+YG R++V++ DCY + +H L+ VPGK KDYI P
Sbjct: 290 TIYSVYRKMRDKQLSFSQVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIP 349
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEW 540
K NGYQSLHT + G P+E Q+RT++MH AE G AAHW YK G S + +W
Sbjct: 350 KINGYQSLHTTLVGPFGAPIEFQVRTRKMHEIAEAGVAAHWLYKNGSADLSDVQKRAHQW 409
Query: 541 ARWVLTWQCEA 551
+ +L Q EA
Sbjct: 410 LKSLLDIQSEA 420
>gi|379715466|ref|YP_005303803.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 316]
gi|383314350|ref|YP_005375205.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis P54B96]
gi|384511044|ref|YP_005690622.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis PAT10]
gi|392400702|ref|YP_006437302.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis Cp162]
gi|341824983|gb|AEK92504.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis PAT10]
gi|377654172|gb|AFB72521.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 316]
gi|380869851|gb|AFF22325.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis P54B96]
gi|390531780|gb|AFM07509.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis Cp162]
Length = 763
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 61 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLED 120
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 121 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 172
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 173 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 232
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 233 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 291
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 292 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 351
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 352 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|300858587|ref|YP_003783570.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis FRC41]
gi|384504771|ref|YP_005681441.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1002]
gi|300686041|gb|ADK28963.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis FRC41]
gi|302330856|gb|ADL21050.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 1002]
Length = 759
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 57 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLED 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 229 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 288 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 348 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 401
>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
sp. PCC 8106]
Length = 755
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/357 (43%), Positives = 215/357 (60%), Gaps = 14/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +AF A + H GQ R SG+PY+ H + A LL +G+ TV+AAG LHD ++D +
Sbjct: 42 EIVCRAFEFAYKLHEGQYRKSGEPYINHPIAVAGLLRYLGSEGTVIAAGFLHDIIEDTEV 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAV 316
+ D + FG+ V LVEGV+KLS+ N ++KT +A+ MFLAMA D R +
Sbjct: 102 TPDELESHFGSEVRQLVEGVTKLSKF-------NFSNKTERQAENFRRMFLAMAKDIRVI 154
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ LP KR+ A ET EIF PLA+RLGI +K +LE+L FK+L P+
Sbjct: 155 VVKLADRLHNMRTLEFLPDHKRRSIALETREIFAPLAHRLGIGRFKWELEDLSFKYLEPE 214
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ S + + E + + L L+ I + GR K L+ I+ KM +
Sbjct: 215 AYREIQSLVADKRNIREEKLAEVADFLRTRLEKAGIKSYEVNGRPKHLHGIYRKMHNHQK 274
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ LR+IVE E+CY+ L +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 275 QFHEIYDLAALRVIVETNEECYRTLAIVHDAFRPIPGRFKDYIGLPKPNRYQSLHTGVIG 334
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHS--SFVLQMVEWARWVLTWQ 548
P+EVQIRT EMH AE+G AAHW+YKE G ++ S W R +L WQ
Sbjct: 335 STGRPIEVQIRTVEMHHIAEYGIAAHWKYKETGGSNYAKMSNSDDKFTWLRQLLEWQ 391
>gi|315640053|ref|ZP_07895178.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
gi|315484181|gb|EFU74652.1| GTP diphosphokinase [Enterococcus italicus DSM 15952]
Length = 745
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 215/357 (60%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH GQ R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 35 FVQKALDYATSAHEGQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVT 94
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG VA LV+GV+KL ++ + E A M +AMA D R +++
Sbjct: 95 LQDLTEEFGPDVAMLVDGVTKLGKIKYKSHEEQLAENH------RKMLIAMAQDLRVIMV 148
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A+ETL+I+ PLA+RLGIS K +LE+ +++NP Q+
Sbjct: 149 KLADRLHNMRTLKHLREDKQRRIARETLDIYAPLAHRLGISRIKWELEDRSLRYINPQQY 208
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + DE A V +E+L A ++ +I + + GR K +YSI+ KM+ KK
Sbjct: 209 YRIVHLMKTKRDEREAYVDKTVEELRIATEELDI-YAEIYGRPKHIYSIYRKMVDKKKQF 267
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 268 DEIYDLLAIRVIVDSIKDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPN 327
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AEFG AAHW YKEG D + + + V W + +L + E+
Sbjct: 328 GNPVEIQIRTHEMHEIAEFGVAAHWAYKEGKTDKVNPDQMTEQVGWFKEILELKDES 384
>gi|347548906|ref|YP_004855234.1| putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
gi|346981977|emb|CBW85962.1| Putative (p)ppGpp synthetase [Listeria ivanovii subsp. ivanovii PAM
55]
Length = 738
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRISNETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLNDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|317122080|ref|YP_004102083.1| (p)ppGpp synthetase I SpoT/RelA [Thermaerobacter marianensis DSM
12885]
gi|315592060|gb|ADU51356.1| (p)ppGpp synthetase I, SpoT/RelA [Thermaerobacter marianensis DSM
12885]
Length = 731
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 157/387 (40%), Positives = 230/387 (59%), Gaps = 18/387 (4%)
Query: 165 LTFNMEDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYL 224
+ ++ +I L A +L A+L D++ +AF ++ AH+GQ RASG ++
Sbjct: 1 MAVELQPSITPDELLERAGRYLGPAEL-------DWLRRAFEFSKAAHQGQKRASGRDFI 53
Query: 225 LHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQL 284
H + A++LA + ++ + A LLHDT++D ++ + + R FG VA LV+GV+KL+Q+
Sbjct: 54 EHPLAVALILADLELDAATLVAALLHDTVEDTPVTLEEVEREFGPEVALLVDGVTKLNQI 113
Query: 285 SKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAK 343
R +A+ L MFLAMA D R VLIKLADRLHNM TL +P K+ ++
Sbjct: 114 EWRTRLEE------QAENLRKMFLAMARDIRVVLIKLADRLHNMRTLAVVPREKQIAKSR 167
Query: 344 ETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKL--VECFDEAMVTSAIEKL 401
ETLEIF PLA+RLG+S + +LE+L ++L P+++ EL+ ++ E + I L
Sbjct: 168 ETLEIFAPLAHRLGMSQIQWELEDLALRYLEPERYRELAERIPRKRAEREELAQVIIATL 227
Query: 402 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRV 461
+ L + I + GR K YSI+ KM ++ + +I+D+ +R+IV+ +DCY AL V
Sbjct: 228 KARLAEAGIRADI-QGRAKHFYSIYRKMYEQGKDLSQIYDLIAVRVIVDTVKDCYGALGV 286
Query: 462 VHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHW 521
VH +W +PG+ KDYI PK N YQSLHT V G P E+QIRT +MH AE+G AAHW
Sbjct: 287 VHTIWRPLPGRFKDYIATPKSNMYQSLHTTVIGPQGEPFEIQIRTWDMHRTAEYGIAAHW 346
Query: 522 RYKEGDCQHSSFVLQMVEWARWVLTWQ 548
RYKE F ++ W R VL WQ
Sbjct: 347 RYKERGRTDRDFDAKLA-WLRQVLEWQ 372
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 274 bits (701), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 217/358 (60%), Gaps = 12/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+PY+ H + A +L +G+++ +VAAG LHD ++D +
Sbjct: 43 DLISRAFLFAYQLHKGQYRKSGEPYINHPIAVAGILRFLGSDTAMVAAGFLHDIIEDTDV 102
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG V LVEGV+KLS+ + +NT + +A+ MFLAMA D R ++
Sbjct: 103 TPEELESHFGPEVRHLVEGVTKLSKFNF----SNTTER--QAENFRRMFLAMAQDIRVIV 156
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL+ + K++ A ET EIF PLANRLGI K +LE+L FK++ P+
Sbjct: 157 VKLADRLHNMRTLEFMSESKQRSIALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEA 216
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ ++ + E + + + L ++ I + GR K LY I+ KM ++
Sbjct: 217 YREIQIRVADRRATREEKLAALADILRDRMEKSGIRCYEVTGRPKHLYGIYKKMQERHKQ 276
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
EI+DI LRLIVE E+CY+AL +VH + +PG+ KDYI PK N YQSLHT V G
Sbjct: 277 FHEIYDIAALRLIVETNEECYRALAIVHDSYRPIPGRFKDYIGLPKPNRYQSLHTGVIGN 336
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
P+EVQIRT EMH AE+G AAHW+YKE + + E W R +L WQ +
Sbjct: 337 TGRPVEVQIRTVEMHHIAEYGIAAHWKYKETGGSEFGKLTETDEKFTWLRQLLEWQSD 394
>gi|375288764|ref|YP_005123305.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 3/99-5]
gi|371576053|gb|AEX39656.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 3/99-5]
Length = 763
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 61 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLED 120
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 121 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 172
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 173 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 232
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 233 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 291
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 292 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 351
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 352 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 405
>gi|289434803|ref|YP_003464675.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289171047|emb|CBH27589.1| GTP pyrophosphokinase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
Length = 738
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 220/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEEFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|163814889|ref|ZP_02206277.1| hypothetical protein COPEUT_01040 [Coprococcus eutactus ATCC 27759]
gi|158449828|gb|EDP26823.1| RelA/SpoT family protein [Coprococcus eutactus ATCC 27759]
Length = 814
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 219/353 (62%), Gaps = 16/353 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+GQ+R SG+PY++H + A++LA + + + AG+LHD ++D ++ +
Sbjct: 107 KAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAELELDKETIVAGILHDVVEDTVMTSEE 166
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I F VA LV+GV+KL+QL T V+A+ L MFL+MA D R +LIKLA
Sbjct: 167 IASEFSEEVAFLVDGVTKLTQLKM-----TTDKIEVQAENLRKMFLSMAKDIRVILIKLA 221
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ TL K+ A+ET++I+ P+A+RLGIS KV+L++L +L P+ + +L
Sbjct: 222 DRLHNLRTLQYQSPEKQIEKARETMDIYAPIAHRLGISKIKVELDDLSMMYLMPEVYNDL 281
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ E E A + +E +++ + + + + GR K +SI+ KM + T+D+I
Sbjct: 282 KAQIDEKLTERDAYIKRVVEDVKKHIDNAGLEAEI-DGRVKHFFSIYKKMKNQNKTLDQI 340
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+DI+ +R+ V DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 341 YDIFAVRIKVNTVRDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQP 400
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE + V+Q E W R +L WQ
Sbjct: 401 FEIQIRTYEMHRTAEYGIAAHWKYKEN---ITGTVMQKEEEKLSWLRQILEWQ 450
>gi|111023852|ref|YP_706824.1| GTP diphosphokinase [Rhodococcus jostii RHA1]
gi|110823382|gb|ABG98666.1| GTP diphosphokinase [Rhodococcus jostii RHA1]
Length = 791
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 90 RAYDVAEERHASQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQ 149
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 150 LTDEFGEEVAHLVDGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVA 201
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 202 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 261
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 262 VRLVADRAPSRDTYLAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 320
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 321 HDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 380
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT +MH AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 381 LEVQIRTHDMHRTAEFGIAAHWRYKESKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|429200273|ref|ZP_19191983.1| GTP diphosphokinase [Streptomyces ipomoeae 91-03]
gi|428664025|gb|EKX63338.1| GTP diphosphokinase [Streptomyces ipomoeae 91-03]
Length = 737
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/367 (42%), Positives = 218/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 22 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 81
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 82 LRRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 133
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 134 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 193
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 194 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 249
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 250 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 309
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R
Sbjct: 310 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPRSTGKDDHLNDMAWLRQ 369
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 370 LLDWQKE 376
>gi|254784428|ref|YP_003071856.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Teredinibacter turnerae T7901]
gi|237685288|gb|ACR12552.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Teredinibacter turnerae T7901]
Length = 704
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/331 (45%), Positives = 209/331 (63%), Gaps = 11/331 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+Y AE+AH GQ R SG+PY+ H + A +LA+I + + A +LHD ++D +
Sbjct: 23 VKRAYYYAEQAHTGQFRRSGEPYITHPLAVANILASIHMDHQSLMAAMLHDVIEDTGIGK 82
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I FG VA++V+GVSKL+++ + A K +A M +AMA D R +++K
Sbjct: 83 SAISHQFGDQVAEIVDGVSKLAKIDY----ESQAEK--QAKNFQKMAMAMARDLRVIVVK 136
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
L+DRLHNM TL ALP K++R AKETLEI+ P+A+RLG++ W+++ E+ F ++P + T
Sbjct: 137 LSDRLHNMRTLGALPPEKKRRIAKETLEIYAPIAHRLGMNDWRIEFEDRGFAAMHPLRAT 196
Query: 380 ELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L + L V +A+V +E L+ + I LV+ GR K LYSI+ KM K + +
Sbjct: 197 RLHASLQQVRGNRKAIVEKIQSSIEMRLQRETIEGLVI-GREKHLYSIYNKMRGKHKSFE 255
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI D+Y R+IVEN + CY+AL +H L+ P + KDYI PK NGYQSLHTVV G
Sbjct: 256 EIMDVYAFRIIVENIDTCYRALGAIHNLYKPKPNEFKDYIAIPKENGYQSLHTVVVGTQG 315
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYK-EGD 527
VP+EVQIRTKEM A G AAHW YK GD
Sbjct: 316 VPIEVQIRTKEMDELASRGIAAHWLYKSNGD 346
>gi|422416024|ref|ZP_16492981.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|423100605|ref|ZP_17088312.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
gi|313623673|gb|EFR93827.1| GTP diphosphokinase [Listeria innocua FSL J1-023]
gi|370792829|gb|EHN60672.1| GTP diphosphokinase [Listeria innocua ATCC 33091]
Length = 738
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGEEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|254175404|ref|ZP_04882064.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
gi|160696448|gb|EDP86418.1| guanosine-3`,5`-bis(diphosphate) 3`-pyrophosphohydrolase
[Burkholderia mallei ATCC 10399]
Length = 789
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 75 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAIMAALLHDVMEDQGVTK 134
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 135 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 188
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 189 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 248
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L + ++ +E +++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 249 TLEKAAIAARGNRREVIGKILESVQRAMADAKIDAEI-TGREKTIYSIYKKMRDKQLSFS 307
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + V+H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 308 QVLDVYGFRIVVEHPLDCYTCIGVLHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 367
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 368 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 421
>gi|453364898|dbj|GAC79531.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia malaquae NBRC 108250]
Length = 738
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 212/357 (59%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+ H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 34 QAYDVAEQRHTGQFRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEE 93
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FGA VA LV+GV+KL +++ E + + M +AMA D R ++IK+A
Sbjct: 94 LEKDFGAEVAHLVDGVTKLDKVA--------LGSAAEGETIRKMIIAMARDPRVLVIKVA 145
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 146 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 205
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + L AL +I V GR K +SI+ KM+ + D+I
Sbjct: 206 VRLVADRAPSRDTYLARVRSDLNNALGGAHIEATV-EGRPKHYWSIYQKMIVRGKDFDDI 264
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P F YQSLHT V G P
Sbjct: 265 HDLVGMRVLCDEVRDCYAAIGVVHSLWQPMAGRFKDYIAQPSFGVYQSLHTTVIGPEGKP 324
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LE+QIRT EMH AEFG AAHWRYKEG + E W R +L WQ EA
Sbjct: 325 LEIQIRTVEMHRTAEFGIAAHWRYKEGRKGKGRKATDVAEVDDMAWMRQLLDWQREA 381
>gi|16800626|ref|NP_470894.1| hypothetical protein lin1558 [Listeria innocua Clip11262]
gi|422413014|ref|ZP_16489973.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
gi|16414045|emb|CAC96789.1| relA [Listeria innocua Clip11262]
gi|313618809|gb|EFR90701.1| GTP diphosphokinase [Listeria innocua FSL S4-378]
Length = 738
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 219/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGEEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|420187166|ref|ZP_14693188.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
gi|394256604|gb|EJE01533.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM039]
Length = 729
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHKIAEHGVAAHWAYKEG 349
>gi|387136696|ref|YP_005692676.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 42/02-A]
gi|348607141|gb|AEP70414.1| GTP pyrophosphokinase [Corynebacterium pseudotuberculosis 42/02-A]
Length = 746
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 147/354 (41%), Positives = 221/354 (62%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H G R SGDPY+ H + A + A IG ++T + A LLHDT++D S +
Sbjct: 44 RAYTTAEHLHEGVFRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTEYSLED 103
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 104 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 155
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 156 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEV 215
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + +L+QALK+ +I V+ GR K +SI+ KM+ + ++I
Sbjct: 216 VRLVADRAPSRDRYLKEITSQLQQALKENHIEAEVM-GRPKHYWSIYQKMIVRGKDFEDI 274
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V++ +CY A+ VVH +A +PG+ KDYI+ PKF YQSLHT V G+ P
Sbjct: 275 FDLVGIRILVDSINNCYAAIGVVHAFYAAMPGRFKDYISSPKFGVYQSLHTTVMGDTGKP 334
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
LEVQ+RT EMH AE+G AAHWRYKE ++S + + W R +L WQ EA
Sbjct: 335 LEVQVRTHEMHFNAEYGIAAHWRYKETKGKNSGEQAEIDQMSWMRQLLDWQKEA 388
>gi|429762033|ref|ZP_19294440.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
gi|429182579|gb|EKY23677.1| GTP diphosphokinase [Anaerostipes hadrus DSM 3319]
Length = 765
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 223/352 (63%), Gaps = 10/352 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L L +E A + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLERSLDSAKEEREAFIQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEG 341
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + + + + + W R VL WQ
Sbjct: 342 HPFEIQIRTFEMHRVAEYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|54025654|ref|YP_119896.1| ppGpp synthetase [Nocardia farcinica IFM 10152]
gi|54017162|dbj|BAD58532.1| putative ppGpp synthetase [Nocardia farcinica IFM 10152]
Length = 798
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/378 (41%), Positives = 222/378 (58%), Gaps = 26/378 (6%)
Query: 179 ETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIG 238
E Y K LA Q KAF A+ H Q R SGDPY+ H + A +LA +G
Sbjct: 85 ELYPKANLAQLQ------------KAFDVADERHAHQFRKSGDPYITHPLAVANILAELG 132
Query: 239 ANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV 298
++T + A LLHDT++D + D + FG VA LV+GV+KL +++ A
Sbjct: 133 MDTTTLVAALLHDTVEDTGYTLDQLRAEFGDEVAHLVDGVTKLDKVNLGA--------AA 184
Query: 299 EADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLG 357
EA+ + M +AMA D R ++IK+ADRLHNM T+ LP K+ + AKETLE+ PLA+RLG
Sbjct: 185 EAETIRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQAKKAKETLEVIAPLAHRLG 244
Query: 358 ISTWKVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVL 415
++T K +LE+L F L+P ++ E+ + + + + ++ L I+ V+
Sbjct: 245 MATVKWELEDLAFAILHPKKYDEIVRLVADRAPSRDTYLAKVRAEIVNTLAASRIN-AVV 303
Query: 416 CGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKD 475
GR K +SI+ KM+ K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KD
Sbjct: 304 EGRPKHYWSIYQKMIVKGKDFDDIHDLVGIRILCDEVRDCYAAVGVVHSLWQPMAGRFKD 363
Query: 476 YITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL 535
YI +P++ YQSLHT V G PLEVQIRT +MH AEFG AAHWRYKE +HS +
Sbjct: 364 YIAQPRYGVYQSLHTTVVGPDGKPLEVQIRTHDMHRTAEFGIAAHWRYKETKGKHSGDLA 423
Query: 536 QM--VEWARWVLTWQCEA 551
++ + W R +L WQ EA
Sbjct: 424 EVDDMAWMRQLLDWQREA 441
>gi|420144910|ref|ZP_14652389.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398403467|gb|EJN56709.1| GTP pyrophosphokinase [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 746
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 209/332 (62%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A H+ Q R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVKKALDFANYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS++ +A ++ A + M LAMA D R V++
Sbjct: 87 LGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQY 200
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++SK + +A + AI++++ ++ D NI + + GR K +YSI+ KM K
Sbjct: 201 YRIVHLMNSKRAQR--QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+IV+ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 258 QFEEIYDLLAIRVIVDTIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PKGQPLEIQIRTEEMHQVAEYGVAAHWAYKEG 349
>gi|226366288|ref|YP_002784071.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus B4]
gi|226244778|dbj|BAH55126.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus B4]
Length = 791
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 90 RAYDVAEERHASQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQ 149
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 150 LTDEFGEEVAHLVDGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVA 201
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 202 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 261
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 262 VRLVADRAPSRDTYLAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 320
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 321 HDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 380
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT +MH AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 381 LEVQIRTHDMHRTAEFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|166031162|ref|ZP_02233991.1| hypothetical protein DORFOR_00848 [Dorea formicigenerans ATCC
27755]
gi|166029009|gb|EDR47766.1| RelA/SpoT family protein [Dorea formicigenerans ATCC 27755]
Length = 803
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 244/422 (57%), Gaps = 40/422 (9%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A++AH Q R SG+PY++H + A++LA + + + A LLHD ++D + DY
Sbjct: 92 KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTRIGEDY 151
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 320
I FG VA LV+GV+KL +++ +A K ++A+ L MFLAMA D R ++IKL
Sbjct: 152 IKEEFGEEVALLVDGVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKL 205
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM TL + K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +
Sbjct: 206 ADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFD 265
Query: 381 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L +++ + E V ++++ +K+ I V GR K +SI+ KM+ + T+D+
Sbjct: 266 LVNQINARKTEREEFVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQ 324
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT +
Sbjct: 325 IYDLFAVRIIVDSVKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQ 384
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 556
P E+QIRT+EMH AE+G AAHW+YKE + + + W R +L WQ + MS ++
Sbjct: 385 PFEIQIRTQEMHKTAEYGIAAHWKYKESGGSKKGVMAEEEKMSWLRQILEWQRD-MSDNK 443
Query: 557 SCVG--NGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
+ GD ADD + + PQ V+ PT ST +
Sbjct: 444 EFLSLIKGD-------LDLFADDV-YCFTPQG----------------DVKTLPTGSTPI 479
Query: 615 DL 616
D
Sbjct: 480 DF 481
>gi|452975303|gb|EME75122.1| GTP pyrophosphokinase RelA [Bacillus sonorensis L12]
Length = 733
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 217/357 (60%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHR Q R SG+PY++H ++ A +L + + +A G LHD ++D ++
Sbjct: 27 FIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLHDVVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEDLKEAFNEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + +++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVQEVVNEVKNRVEEVNIK-ADFSGRPKHIYSIYRKMAMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + +SF ++ W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGIAAHWAYKEGKSVNEDASFEKKL-SWFREILEFQNES 375
>gi|323702158|ref|ZP_08113825.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333924436|ref|YP_004498016.1| (p)ppGpp synthetase I SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|323532845|gb|EGB22717.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum nigrificans DSM
574]
gi|333749997|gb|AEF95104.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 723
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 220/355 (61%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHRGQ R SG+ Y++H + A++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAENAHRGQKRISGEDYIVHPLAIAIILAELQLDIKTVAAGLLHDVVEDTGVT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG+ VA +V+GV+KL +L +RE +A+ L MFLAMA D R +LI
Sbjct: 82 LADIENNFGSEVARMVDGVTKLGKLQFQSREER------QAENLRKMFLAMAKDIRVILI 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL K++ A+ETL F PLA+RLGI K +LE+L F++ P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLVFFAPLAHRLGIYKIKWELEDLSFRYKEPEQY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
L ++ + E + I L + L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QHLKMQIAKTRAKREEYIQEVIRLLAEKLNAVNIRAEI-QGRPKNLYSIYQKMVEQQKEL 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I D+ +R++V+ +DCY AL + H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 KDIFDVQAVRVLVDTVKDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPN 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT +MH AE+G AAHW+YKEG Q + + + W R ++ +Q +A
Sbjct: 315 GEPVEIQIRTWDMHRVAEYGIAAHWKYKEGK-QGDQDLDKKLAWLRQMMDFQHDA 368
>gi|222151518|ref|YP_002560674.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
gi|222120643|dbj|BAH17978.1| GTP pyrophosphokinase [Macrococcus caseolyticus JCSC5402]
Length = 730
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/330 (42%), Positives = 213/330 (64%), Gaps = 10/330 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV+K++ AE+AH GQ R +G PY++H ++ A +LA + + + AG LHD ++D +
Sbjct: 27 FVVKSYELAEKAHEGQFRKNGLPYIMHPIQVAGILAEMKLDGPTIVAGFLHDVVEDTPYT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
Y+ + + F VA +V+GV+KL ++ ++ +A+ +F+A+A D R +L+
Sbjct: 87 YEDLKQMFNEEVAYIVDGVTKLEKVKYRSKAEE------QAENHRKLFIAIAKDVRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL A+P K+ R AKETLEI+ PLA+RLGI+T K +LE++ ++++ Q+
Sbjct: 141 KLADRLHNMRTLKAMPHEKQVRIAKETLEIYAPLAHRLGINTIKWELEDISLRYIDSIQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ K E+ + +AI+ +++ ++ I+ + GR K +YSI+ KM+K+K
Sbjct: 201 FRIVHLMKKKRSERESYIENAIDNIQKEMQITGINGEI-TGRPKHIYSIYRKMVKQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 DQIFDLLAIRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVVGPN 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 320 GDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|334136491|ref|ZP_08509954.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
gi|333605960|gb|EGL17311.1| GTP diphosphokinase [Paenibacillus sp. HGF7]
Length = 728
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/353 (42%), Positives = 212/353 (60%), Gaps = 11/353 (3%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
IK YE AE+AH GQ+R SG+PY+LH + A +L + + T + A LLHD ++D +S
Sbjct: 22 IKEAYEFAEQAHHGQVRKSGEPYILHPLAVADILVDMQMDVTSIIAALLHDVVEDTTVSL 81
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG A LV+G++KL ++ +E + + MF+AMA D R +LIK
Sbjct: 82 EAVQDKFGRTCAMLVDGLTKLERIKFKTKEEQ------QNENYRKMFVAMAQDIRVILIK 135
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL ++R A ETLEIF P+A+RLGIS K ++E++ ++LNP Q+
Sbjct: 136 LADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIKWEMEDIALRYLNPQQYY 195
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ + + + E + I ++ L++ I + GR K +YSIH KM + +
Sbjct: 196 RIVNLMQKKRTEREKYIEDVIRNIQDKLREMGIEGDI-SGRPKHIYSIHKKMSSRNKQFN 254
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ LR+IV+N +DCY AL ++H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 EIYDLMALRVIVDNIKDCYAALGIIHTLWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPKG 314
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
PLEVQIRT EMH AE+G AAHW YKEG+ ++W R +L Q E
Sbjct: 315 EPLEVQIRTWEMHKTAEYGIAAHWAYKEGNGSPEGTFSDKMQWFREILELQKE 367
>gi|312139501|ref|YP_004006837.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325672609|ref|ZP_08152305.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
gi|311888840|emb|CBH48152.1| GTP diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus equi 103S]
gi|325556486|gb|EGD26152.1| GTP diphosphokinase [Rhodococcus equi ATCC 33707]
Length = 778
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 220/362 (60%), Gaps = 16/362 (4%)
Query: 197 REDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
+ DF + +A+ AE+ H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++
Sbjct: 69 KADFSLLQRAYDVAEQRHATQFRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVE 128
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 313
D S + + FG VA LV+GV+KL ++ E + + M +AMA D
Sbjct: 129 DTGYSLEELTAEFGDEVAHLVDGVTKLDKV--------VLGSAAEGETIRKMIIAMARDP 180
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R ++IK+ADRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L
Sbjct: 181 RVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAIL 240
Query: 374 NPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+P ++ E+ + + + + ++ L I+ V+ GR K +SI+ KM+
Sbjct: 241 HPKKYEEIVRLVADRAPSRDTYLAKVRAEINATLSASRIN-AVVEGRPKHYWSIYQKMIV 299
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT
Sbjct: 300 KGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTT 359
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQC 549
V G PLEVQIRT++MH AEFG AAHWRYKE +HS+ + ++ + W R +L WQ
Sbjct: 360 VIGPEGKPLEVQIRTRDMHRTAEFGIAAHWRYKETKGKHSNDIAEVDDMAWMRQLLDWQR 419
Query: 550 EA 551
EA
Sbjct: 420 EA 421
>gi|88797492|ref|ZP_01113081.1| RelA/SpoT protein [Reinekea blandensis MED297]
gi|88779664|gb|EAR10850.1| RelA/SpoT protein [Reinekea sp. MED297]
Length = 700
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 220/357 (61%), Gaps = 16/357 (4%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+ +A++ AE+AH GQMR SG+ Y+ H + A +L+ + + + A +LHD L+D +S
Sbjct: 23 IKRAYFYAEQAHEGQMRRSGERYITHPLAVANILSEMHMDHQSIMAAMLHDVLEDTAVSK 82
Query: 261 DYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
D I FG GVA+LV+GVSKL+ L SKL + A+ M LAM+ D R +
Sbjct: 83 DAIIEQFGEGVAELVDGVSKLTHLEFESKLEEQ---------AENFQKMVLAMSKDIRVI 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ A+P K++R ++ETLEI+ P+A RLGI+ +V+LENL F+++ P
Sbjct: 134 LVKLADRLHNMRTMGAMPPEKKRRKSRETLEIYAPIALRLGINDMRVELENLAFENMYPL 193
Query: 377 QHTELSSKLVECFDEAMVTSA-IEKLEQA-LKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ + + S + + T A IE QA L D+ I+ V GR K L+SI+ KM +K+
Sbjct: 194 RASRIQSAIKKQIGARKETVAHIEGALQARLLDEGINANV-NGRQKHLFSIYQKMREKRK 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++ EI D+Y R+I ++ + CY+ L +VH L+ VP + KDYI PK NGYQSLHT + G
Sbjct: 253 SLKEILDVYAFRIITDSVDSCYRILGIVHNLYKPVPNRFKDYIAVPKINGYQSLHTTLIG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
VP+E+QIRT+EM A G AAHW YK + Q S + W + +L Q A
Sbjct: 313 ANGVPMEIQIRTREMEDMANHGIAAHWLYKTDETQSSQTHARARRWVKNLLEMQERA 369
>gi|224476731|ref|YP_002634337.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421338|emb|CAL28152.1| GTP pyrophosphokinase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 729
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 220/348 (63%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ + +H V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSEEEYEH-------VLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D ++D + F VA +VEGV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE++ ++++ Q+ + + K EA + +AI+++ + +IS + GR
Sbjct: 183 IKWELEDIALRYIDGVQYFRIVNLMKKKRSEREAYIANAIDRISAEMDKMHISGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT+EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTQEMHEIAEHGVAAHWAYKEG 349
>gi|397737388|ref|ZP_10504060.1| GTP 3'-pyrophosphotransferase [Rhodococcus sp. JVH1]
gi|396926827|gb|EJI94064.1| GTP 3'-pyrophosphotransferase [Rhodococcus sp. JVH1]
Length = 791
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 90 RAYDVAEERHASQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQ 149
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 150 LTDEFGEEVAHLVDGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVA 201
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 202 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 261
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 262 VRLVADRAPSRDTYLAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 320
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 321 HDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 380
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT +MH AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 381 LEVQIRTHDMHRTAEFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|255325089|ref|ZP_05366195.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
gi|255297654|gb|EET76965.1| GTP pyrophosphokinase [Corynebacterium tuberculostearicum SK141]
Length = 762
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/360 (41%), Positives = 218/360 (60%), Gaps = 18/360 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AER H G R SG+PY+ H + A + A IG ++T + A LLHDT++D
Sbjct: 52 DLLNRAYDTAERLHEGVFRKSGEPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDY 111
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + R FG VA LV+GV+KL +++ EA+ + M +AMA D R ++
Sbjct: 112 SLEDLTRDFGPEVARLVDGVTKLDKVA--------LGSAAEAETIRKMIVAMATDPRVLV 163
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IK++DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P +
Sbjct: 164 IKVSDRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKK 223
Query: 378 HTELSSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ E+ + + D A+ I ++ ALK+ I V+ GR K +SI+ KM+ +
Sbjct: 224 YDEIVRMVADRAPSRDRAL-KEIISQVSGALKENGIEAEVM-GRPKHYWSIYQKMIVRGR 281
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI D+ G+R++VE+ CY A+ VVH ++ +PG+ KDYI+ P+F YQSLHT V
Sbjct: 282 DFAEIFDLVGIRILVEDVNSCYAAIGVVHSIYQALPGRFKDYISSPRFGVYQSLHTTVLA 341
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQCEA 551
G LEVQ+RT EMH AEFG AAHWRYKE + H V QM W R +L WQ EA
Sbjct: 342 NGGATLEVQVRTHEMHYNAEFGVAAHWRYKETKGKNSGHQEEVDQMA-WMRQLLDWQKEA 400
>gi|334341782|ref|YP_004546762.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
gi|334093136|gb|AEG61476.1| RelA/SpoT family protein [Desulfotomaculum ruminis DSM 2154]
Length = 723
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/355 (42%), Positives = 219/355 (61%), Gaps = 11/355 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHRGQ R SG+ Y++H + +++LA + + VAAGLLHD ++D ++
Sbjct: 22 FLRKAYNFAENAHRGQKRISGEDYIVHPLAISIILAELQLDLQTVAAGLLHDVVEDTGIT 81
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA++V+GV+KL +L +E +A+ L MFLAMA D R +LI
Sbjct: 82 LTDIESNFGPEVANMVDGVTKLGKLQFQNKEER------QAENLRKMFLAMAKDIRVILI 135
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL K++ A+ETL F PLA+RLGI K +LE+L F++ P+Q+
Sbjct: 136 KLADRLHNLRTLQFQSERKQKEVAEETLMFFAPLAHRLGIYKIKWELEDLSFRYKEPEQY 195
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ ++ + E + I++L + L NI + GR K+LYSI+ KM++++ +
Sbjct: 196 QRMKVQIAKSRVKREEHIQEVIKELGEKLAAVNIK-TEIQGRPKNLYSIYQKMMEQQKEL 254
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I D+ +R++V +DCY AL + H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 255 KDIFDVQAVRVLVSTVKDCYGALGIAHTLWKPIPGRFKDYIAMPKSNMYQSLHTTVIGPQ 314
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AE+G AAHWRYKEG F ++ W R ++ +Q +A
Sbjct: 315 GEPVEIQIRTWEMHKVAEYGIAAHWRYKEGGRGEGDFDKKLA-WLRQMMDFQHDA 368
>gi|384103695|ref|ZP_10004661.1| GTP diphosphokinase [Rhodococcus imtechensis RKJ300]
gi|419965699|ref|ZP_14481639.1| GTP diphosphokinase [Rhodococcus opacus M213]
gi|424852310|ref|ZP_18276707.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus PD630]
gi|432337532|ref|ZP_19588954.1| GTP diphosphokinase [Rhodococcus wratislaviensis IFP 2016]
gi|356666975|gb|EHI47046.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Rhodococcus opacus PD630]
gi|383838765|gb|EID78133.1| GTP diphosphokinase [Rhodococcus imtechensis RKJ300]
gi|414568892|gb|EKT79645.1| GTP diphosphokinase [Rhodococcus opacus M213]
gi|430775550|gb|ELB91051.1| GTP diphosphokinase [Rhodococcus wratislaviensis IFP 2016]
Length = 791
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 90 RAYDVAEERHASQRRKSGDPYITHPLAVASILAELGMDTTTLVAALLHDTVEDTGYSLEQ 149
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 150 LTDEFGEEVAHLVDGVTKLDKV--------VLGNAAEGETIRKMIIAMARDPRVLVIKVA 201
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 202 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYDEI 261
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 262 VRLVADRAPSRDTYLAKVRAEINATLTASRIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 320
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 321 HDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 380
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT +MH AEFG AAHWRYKE +HS V ++ + W R +L WQ EA
Sbjct: 381 LEVQIRTHDMHRTAEFGIAAHWRYKETKGRHSGDVAEVDDMAWMRQLLDWQREA 434
>gi|27468233|ref|NP_764870.1| GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57867129|ref|YP_188772.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242242906|ref|ZP_04797351.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251811038|ref|ZP_04825511.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875942|ref|ZP_06284809.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|293366410|ref|ZP_06613088.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|417655951|ref|ZP_12305642.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|417659668|ref|ZP_12309268.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|417908499|ref|ZP_12552256.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|417911252|ref|ZP_12554959.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|417912614|ref|ZP_12556303.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|418327807|ref|ZP_12938944.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|418603642|ref|ZP_13167024.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|418609265|ref|ZP_13172424.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|418611758|ref|ZP_13174827.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|418615702|ref|ZP_13178641.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|418616388|ref|ZP_13179313.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|418623420|ref|ZP_13186131.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|418626110|ref|ZP_13188736.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|418628145|ref|ZP_13190702.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|418630931|ref|ZP_13193403.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|418633468|ref|ZP_13195881.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|418664077|ref|ZP_13225573.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|419771360|ref|ZP_14297414.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|420163791|ref|ZP_14670525.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|420165616|ref|ZP_14672307.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|420168637|ref|ZP_14675245.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|420170335|ref|ZP_14676896.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|420173158|ref|ZP_14679653.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|420174606|ref|ZP_14681055.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|420184598|ref|ZP_14690707.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|420190242|ref|ZP_14696186.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|420192570|ref|ZP_14698428.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|420196874|ref|ZP_14702608.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|420202331|ref|ZP_14707924.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|420204546|ref|ZP_14710104.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|420206053|ref|ZP_14711563.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|420209134|ref|ZP_14714572.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|420212181|ref|ZP_14717534.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|420214089|ref|ZP_14719369.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|420216238|ref|ZP_14721454.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|420220573|ref|ZP_14725532.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|420221584|ref|ZP_14726512.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|420225825|ref|ZP_14730652.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|420227420|ref|ZP_14732188.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|420229734|ref|ZP_14734438.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|420232145|ref|ZP_14736786.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|421606876|ref|ZP_16048128.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
gi|59798397|sp|Q8CS97.1|RELA_STAES RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|81674357|sp|Q5HNR8.1|RELA_STAEQ RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|27315779|gb|AAO04914.1|AE016748_148 GTP pyrophosphokinase [Staphylococcus epidermidis ATCC 12228]
gi|57637787|gb|AAW54575.1| GTP pyrophosphokinase [Staphylococcus epidermidis RP62A]
gi|242233621|gb|EES35933.1| GTP pyrophosphokinase [Staphylococcus epidermidis W23144]
gi|251805456|gb|EES58113.1| GTP pyrophosphokinase [Staphylococcus epidermidis BCM-HMP0060]
gi|281294967|gb|EFA87494.1| GTP diphosphokinase [Staphylococcus epidermidis SK135]
gi|291319444|gb|EFE59812.1| GTP diphosphokinase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329735305|gb|EGG71597.1| GTP diphosphokinase [Staphylococcus epidermidis VCU045]
gi|329737201|gb|EGG73455.1| GTP diphosphokinase [Staphylococcus epidermidis VCU028]
gi|341653575|gb|EGS77342.1| GTP diphosphokinase [Staphylococcus epidermidis VCU105]
gi|341655860|gb|EGS79583.1| GTP diphosphokinase [Staphylococcus epidermidis VCU037]
gi|341657324|gb|EGS81014.1| GTP diphosphokinase [Staphylococcus epidermidis VCU109]
gi|365232585|gb|EHM73576.1| GTP diphosphokinase [Staphylococcus epidermidis 14.1.R1.SE]
gi|374407151|gb|EHQ78016.1| GTP diphosphokinase [Staphylococcus epidermidis VCU041]
gi|374408270|gb|EHQ79102.1| GTP diphosphokinase [Staphylococcus epidermidis VCU065]
gi|374410877|gb|EHQ81607.1| GTP diphosphokinase [Staphylococcus epidermidis VCU081]
gi|374816752|gb|EHR80951.1| GTP diphosphokinase [Staphylococcus epidermidis VCU118]
gi|374821214|gb|EHR85281.1| GTP diphosphokinase [Staphylococcus epidermidis VCU120]
gi|374821769|gb|EHR85816.1| GTP diphosphokinase [Staphylococcus epidermidis VCU117]
gi|374830622|gb|EHR94388.1| GTP diphosphokinase [Staphylococcus epidermidis VCU125]
gi|374833733|gb|EHR97404.1| GTP diphosphokinase [Staphylococcus epidermidis VCU126]
gi|374836241|gb|EHR99829.1| GTP diphosphokinase [Staphylococcus epidermidis VCU128]
gi|374838528|gb|EHS02068.1| GTP diphosphokinase [Staphylococcus epidermidis VCU127]
gi|374839221|gb|EHS02739.1| GTP diphosphokinase [Staphylococcus epidermidis VCU129]
gi|383361586|gb|EID38956.1| GTP diphosphokinase [Staphylococcus aureus subsp. aureus IS-K]
gi|394232917|gb|EJD78528.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM095]
gi|394233346|gb|EJD78954.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM087]
gi|394235417|gb|EJD80989.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM088]
gi|394240336|gb|EJD85760.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM067]
gi|394240673|gb|EJD86096.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM070]
gi|394244837|gb|EJD90169.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM061]
gi|394257249|gb|EJE02171.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM040]
gi|394259133|gb|EJE04003.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM037]
gi|394260743|gb|EJE05547.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM023]
gi|394266848|gb|EJE11466.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM020]
gi|394269739|gb|EJE14269.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM018]
gi|394273556|gb|EJE17987.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM015]
gi|394277892|gb|EJE22209.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM008]
gi|394279362|gb|EJE23670.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM003]
gi|394280021|gb|EJE24312.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM001]
gi|394284011|gb|EJE28172.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05005]
gi|394285926|gb|EJE29992.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04008]
gi|394290379|gb|EJE34240.1| GTP diphosphokinase [Staphylococcus epidermidis NIH08001]
gi|394292328|gb|EJE36087.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05001]
gi|394293259|gb|EJE36982.1| GTP diphosphokinase [Staphylococcus epidermidis NIH06004]
gi|394297044|gb|EJE40656.1| GTP diphosphokinase [Staphylococcus epidermidis NIH05003]
gi|394298913|gb|EJE42471.1| GTP diphosphokinase [Staphylococcus epidermidis NIH04003]
gi|394301468|gb|EJE44924.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051668]
gi|406657456|gb|EKC83843.1| GTP pyrophosphokinase [Staphylococcus epidermidis AU12-03]
Length = 729
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|333394996|ref|ZP_08476815.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
gi|336392924|ref|ZP_08574323.1| guanosine polyphosphate pyrophosphohydrolase/synthetase
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 746
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/332 (43%), Positives = 209/332 (62%), Gaps = 14/332 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A H+ Q R SG+PY++H ++ A +LA + + VA+G LHD ++D ++
Sbjct: 27 FVKKALDFATYVHKEQFRQSGEPYIVHPIQVAAILAELKMDPATVASGFLHDVVEDTNIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I FG VA +V+GV+KLS++ +A ++ A + M LAMA D R V++
Sbjct: 87 LGDIQELFGHDVAVIVDGVTKLSKIKYVAHKDELA------ENHRKMILAMAKDLRVVMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A ETLEI+ PLA+RLGIS +K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLRPEKQRRIANETLEIYAPLADRLGISQFKWELEDTALRYLNPQQY 200
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++SK + +A + AI++++ ++ D NI + + GR K +YSI+ KM K
Sbjct: 201 YRIVHLMNSKRAQR--QAYIDEAIKQIKASMTDFNIKYEIY-GRPKHIYSIYKKMRDKHK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+IV+ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 258 QFEEIYDLLAIRVIVDTIKDCYAVLGAIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT+EMH AE+G AAHW YKEG
Sbjct: 318 PKGQPLEIQIRTEEMHQVAEYGVAAHWAYKEG 349
>gi|420177943|ref|ZP_14684277.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|420179188|ref|ZP_14685487.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
gi|394247130|gb|EJD92378.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM057]
gi|394254263|gb|EJD99234.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM053]
Length = 729
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|386828714|ref|ZP_10115821.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
gi|386429598|gb|EIJ43426.1| (p)ppGpp synthetase, RelA/SpoT family [Beggiatoa alba B18LD]
Length = 734
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 233/418 (55%), Gaps = 31/418 (7%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A ++ Q R SG+PYL+H + A +LA +G ++ V+ A +LH+ LD F S +
Sbjct: 40 QAYQFACEIYQEQTRPSGEPYLIHVLTVADILADLGMDTDVLVAAILHEALDQHF-SLET 98
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG V +L++GV+K+ + L + ++ EA+ L M LAM D R VLIKLA
Sbjct: 99 IQNRFGKVVTNLLDGVNKMRFIDNLIEYQKFSEESQEAEGLRKMLLAMVEDVRVVLIKLA 158
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL LP+ ++RFA++TL+IFVPLANRLGI K +LE+L ++L+ D++ E+
Sbjct: 159 DRLHNMRTLKHLPIDVQKRFAQDTLDIFVPLANRLGIWQIKWELEDLALRYLHADEYQEI 218
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ KL E E + I+ L++ L+ I V+ GR K +YSI KM KK L D I
Sbjct: 219 ARKLDEKRVDRERYIAQVIQILQEELRQAGIKGDVM-GRPKHIYSIWRKMQKKNLDFDRI 277
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+DI +R++V N DCY AL ++H W +P + DYI+ PK N YQSLHT V G
Sbjct: 278 YDIRAVRVLVHNVHDCYLALGLIHSKWKHLPSEFDDYISNPKPNNYQSLHTAVYGPEDKV 337
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCV 559
EVQIRT+ MH AE G A+HWRYKE + Q + W R VL K+ +
Sbjct: 338 FEVQIRTEAMHHHAELGVASHWRYKENSLGYDKNFEQKIGWLRKVLK------MKEENTE 391
Query: 560 GNGDSIKPPCTFPSHA-DDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVMDL 616
G+ D I F S DD + PQ V + PT ST +D
Sbjct: 392 GDVDFID---QFKSEILDDRVYVMSPQG----------------KVLDLPTGSTPLDF 430
>gi|295094222|emb|CBK83313.1| (p)ppGpp synthetase, RelA/SpoT family [Coprococcus sp. ART55/1]
Length = 814
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/353 (40%), Positives = 218/353 (61%), Gaps = 16/353 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A+ AH+GQ+R SG+PY++H + A++LA + + + AG+LHD ++D ++ +
Sbjct: 107 KAYKVADAAHKGQLRKSGEPYIMHPLNVAIILAELELDKETIVAGILHDVVEDTVMTSEE 166
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I F VA LV+GV+KL+QL T V+A+ L MFL+MA D R +LIKLA
Sbjct: 167 IAAEFSEEVAFLVDGVTKLTQLKM-----TTDKIEVQAENLRKMFLSMAKDIRVILIKLA 221
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ TL K+ A+ET++I+ P+A+RLGIS KV+L++L +L PD + +L
Sbjct: 222 DRLHNLRTLQYQSPEKQIEKARETMDIYAPIAHRLGISKIKVELDDLSMMYLMPDVYKDL 281
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+++ E E A + + +++ + + + + GR K +SI+ KM + T+D+I
Sbjct: 282 KAQIDEKLTERDAYIKRVVADVKKHIDNAGLEAEI-DGRVKHFFSIYKKMKNQNKTLDQI 340
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+DI+ +R+ V DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G P
Sbjct: 341 YDIFAVRIKVNTVRDCYSALGIIHEMYKPIPGRFKDYIAMPKSNMYQSLHTTLIGPEGQP 400
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE----WARWVLTWQ 548
E+QIRT EMH AE+G AAHW+YKE + V+Q E W R +L WQ
Sbjct: 401 FEIQIRTYEMHRTAEYGIAAHWKYKEN---ITGTVMQKEEEKLSWLRQILEWQ 450
>gi|420183290|ref|ZP_14689423.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|420234790|ref|ZP_14739350.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
gi|394249753|gb|EJD94966.1| GTP diphosphokinase [Staphylococcus epidermidis NIHLM049]
gi|394304033|gb|EJE47443.1| GTP diphosphokinase [Staphylococcus epidermidis NIH051475]
Length = 729
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|359772044|ref|ZP_09275482.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
gi|359310808|dbj|GAB18260.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia effusa NBRC 100432]
Length = 789
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/360 (41%), Positives = 214/360 (59%), Gaps = 20/360 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H+GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D D
Sbjct: 82 QAYDVADERHQGQFRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYGLDE 141
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 142 LESDFGPEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMVIAMARDPRVLVIKVA 193
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 194 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKRYEEI 253
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I+ V GR K +SI+ KM+ K D+I
Sbjct: 254 VRLVADRAPSRDTYLARVRADINNALSGSRITATV-EGRPKHYWSIYQKMIVKGREFDDI 312
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 313 HDLVGMRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 372
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE--------GDCQHSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE G + S + + W R +L WQ EA
Sbjct: 373 LEVQIRTRDMHRTAEFGIAAHWRYKESGYKSKGKGAKRAESAEIDDMAWMRQLLDWQREA 432
>gi|347736231|ref|ZP_08868924.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
gi|346920343|gb|EGY01483.1| GTP pyrophosphokinase rsh [Azospirillum amazonense Y2]
Length = 733
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/352 (41%), Positives = 209/352 (59%), Gaps = 7/352 (1%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
ED + +A+ + +AH Q RASGDPY H +E A LL + + + LLHDT++D
Sbjct: 27 EDKLNRAYVFSMKAHGSQKRASGDPYFSHPLEVAGLLTQLKLDGASIITALLHDTVEDTL 86
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
+ D + R FG +A LV+GV+KLS ++ +N + ++ +A+ + LAM+ D R +
Sbjct: 87 TTLDEVQRLFGPEIARLVDGVTKLS---RIELQNLESDQSKQAENFRKLVLAMSEDIRVL 143
Query: 317 LIKLADRLHNMMTLDALPLC-KRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNP 375
L+KLADRLHNM TL L KR+R A+ETLEI+ PLA R+GI WK QLE L FK LNP
Sbjct: 144 LVKLADRLHNMQTLHYLSKPEKRKRIARETLEIYAPLAERIGIQRWKDQLEELSFKELNP 203
Query: 376 DQHTELSSKLVECFDEAM--VTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
D + ++ +L + ++ V I +L L + + + GR K+ YSI KM +K
Sbjct: 204 DAYDSITKRLQDLEEQGAGRVDRIITELVDTLHENGLPQATVSGRRKAPYSIWRKMQRKN 263
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+T +++ D+ R+ VE+ E CYQAL V+H + VPG+ KDY++ PK NGY+SLHT V
Sbjct: 264 VTFEQLSDVMAFRITVESIEQCYQALGVIHARYPVVPGRFKDYVSTPKPNGYRSLHTTVI 323
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVL 545
G +EVQIRT EMH +E G AAHW YK + W R +L
Sbjct: 324 GPERQRIEVQIRTAEMHEVSELGVAAHWAYKSDGSSQPKTEGRQYRWLRELL 375
>gi|399050755|ref|ZP_10740799.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|433545167|ref|ZP_20501527.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
gi|398051471|gb|EJL43793.1| (p)ppGpp synthetase, RelA/SpoT family [Brevibacillus sp. CF112]
gi|432183556|gb|ELK41097.1| GTP pyrophosphokinase [Brevibacillus agri BAB-2500]
Length = 723
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/333 (44%), Positives = 205/333 (61%), Gaps = 14/333 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ AE+AH GQ+R SG PY++H + A +LA + ++ +AAG LHD ++D +
Sbjct: 22 DLITRAYQLAEKAHEGQIRKSGVPYIMHPIAVAGILANLHMDAVTIAAGFLHDVVEDTDV 81
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D + FG VA LV+GV+KL ++ ++E A + M +AMA D R ++
Sbjct: 82 TLDDLREQFGPDVALLVDGVTKLEKIKYKSKEEQLA------ENHRKMLVAMAQDIRVIM 135
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++ + ETLEIF PLA+RLGI++ K +LE+ ++LNP Q
Sbjct: 136 IKLADRLHNMRTLRHMSEEKQREISDETLEIFAPLAHRLGIASVKWELEDTALRYLNPQQ 195
Query: 378 HTE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKK 433
+ + K VE EA + A + + + L + NI + GR K +YSI KM K+
Sbjct: 196 YYRIVNLMQKKRVE--REAYLNEASDTIREKLGELNIEAEI-SGRPKHIYSIFKKMTKQN 252
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
+EI+D+ LR+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V
Sbjct: 253 KQFNEIYDLLALRIIVNDIRDCYAVLGIVHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVI 312
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G PLEVQIRT +MH AE G AAHW YKEG
Sbjct: 313 GPKGEPLEVQIRTWDMHQTAEIGIAAHWAYKEG 345
>gi|346307058|ref|ZP_08849203.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
gi|345907004|gb|EGX76722.1| hypothetical protein HMPREF9457_00912 [Dorea formicigenerans
4_6_53AFAA]
Length = 781
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/422 (37%), Positives = 244/422 (57%), Gaps = 40/422 (9%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A++AH Q R SG+PY++H + A++LA + + + A LLHD ++D + DY
Sbjct: 70 KAYNLAKKAHGDQKRKSGEPYIIHPLWVAIILADLEMDKETIIAALLHDVVEDTQIGEDY 129
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASK-TVEADRLHTMFLAMA-DARAVLIKL 320
I FG VA LV+GV+KL +++ +A K ++A+ L MFLAMA D R ++IKL
Sbjct: 130 IKEEFGEEVALLVDGVTKLGRVA------YSADKLELQAENLRKMFLAMAKDIRVIIIKL 183
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE 380
ADRLHNM TL + K+Q A+ET++I+ P+A RLGIS K +L++L K+L PD +
Sbjct: 184 ADRLHNMRTLQFMTPAKQQEKARETMDIYAPIAGRLGISKIKTELDDLSLKYLKPDVFFD 243
Query: 381 LSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L +++ + E V ++++ +K+ I V GR K +SI+ KM+ + T+D+
Sbjct: 244 LVNQINARKTEREEFVQQIVDEVSMHMKNAGIKADV-NGRVKHFFSIYKKMVNQDKTVDQ 302
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D++ +R+IV++ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT +
Sbjct: 303 IYDLFAVRIIVDSVKDCYAALGIIHEIYTPIPGRFKDYIAMPKPNMYQSLHTTLMSSIGQ 362
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL--QMVEWARWVLTWQCEAMSKDR 556
P E+QIRT+EMH AE+G AAHW+YKE + + + W R +L WQ + MS ++
Sbjct: 363 PFEIQIRTQEMHKTAEYGIAAHWKYKESGGSKKGVMAEEEKMSWLRQILEWQRD-MSDNK 421
Query: 557 SCVG--NGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
+ GD ADD + + PQ V+ PT ST +
Sbjct: 422 EFLSLIKGD-------LDLFADDV-YCFTPQG----------------DVKTLPTGSTPI 457
Query: 615 DL 616
D
Sbjct: 458 DF 459
>gi|376294946|ref|YP_005166176.1| (p)ppGpp synthetase I SpoT/RelA [Desulfovibrio desulfuricans ND132]
gi|323457507|gb|EGB13372.1| (p)ppGpp synthetase I, SpoT/RelA [Desulfovibrio desulfuricans
ND132]
Length = 737
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 220/361 (60%), Gaps = 25/361 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ + +AH G +R SG+PY+ H + A LLA + + VAAGLLHDT++D
Sbjct: 21 DLIQRAYVFSAQAHDGVVRRSGEPYISHPMNVAYLLADMQLDEATVAAGLLHDTVEDTDT 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVE-ADRLHTMFLAMA-DARAV 316
+ D I FG+ VAD+V+GV+K+S++ + SK V+ A+ + + LAMA D R +
Sbjct: 81 TVDEIEELFGSDVADIVDGVTKISRM-------DFESKAVQQAENIRKLILAMAEDIRVL 133
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM TL+ + K++ A+ET +I+ PLANRLG+ K +LE+LC ++L PD
Sbjct: 134 MVKLADRLHNMRTLEYMKPVKQRLIAQETQDIYAPLANRLGLHRVKTELEDLCLRYLRPD 193
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ +LS + E E + I + LK I V GR K L+SI KM ++ L
Sbjct: 194 VYAQLSEAVHEHRAAGEPYIDKVIGLITDMLKKNKIKGRVF-GRTKHLHSIQVKMEQQGL 252
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
T DEI+D+ R+IV + +DCY L ++H W VPG+ KDYI+ PK N YQSLHT V G
Sbjct: 253 TFDEIYDLIAFRVIVGSLKDCYAVLGLIHAAWRPVPGRFKDYISIPKANMYQSLHTTVMG 312
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-------------GDCQHSSFVLQMVEWA 541
+E+QIRT+EMH AE+G AAHW+YKE D + +++ Q+++W
Sbjct: 313 PDGERIEIQIRTEEMHRIAEYGVAAHWQYKEVGKGAKKGKTAGRRDAERYTWLKQIMDWQ 372
Query: 542 R 542
R
Sbjct: 373 R 373
>gi|154686901|ref|YP_001422062.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|375363176|ref|YP_005131215.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|384266310|ref|YP_005422017.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385265645|ref|ZP_10043732.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387899344|ref|YP_006329640.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|394991954|ref|ZP_10384748.1| RelA [Bacillus sp. 916]
gi|421730833|ref|ZP_16169959.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429506052|ref|YP_007187236.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|451346089|ref|YP_007444720.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452856418|ref|YP_007498101.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|154352752|gb|ABS74831.1| RelA [Bacillus amyloliquefaciens FZB42]
gi|371569170|emb|CCF06020.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|380499663|emb|CCG50701.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|385150141|gb|EIF14078.1| GTP diphosphokinase [Bacillus sp. 5B6]
gi|387173454|gb|AFJ62915.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens Y2]
gi|393807166|gb|EJD68491.1| RelA [Bacillus sp. 916]
gi|407074987|gb|EKE47974.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|429487642|gb|AFZ91566.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens subsp. plantarum
AS43.3]
gi|449849847|gb|AGF26839.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens IT-45]
gi|452080678|emb|CCP22443.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 734
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAQNAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVEEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|160903362|ref|YP_001568943.1| (p)ppGpp synthetase I SpoT/RelA [Petrotoga mobilis SJ95]
gi|160361006|gb|ABX32620.1| (p)ppGpp synthetase I, SpoT/RelA [Petrotoga mobilis SJ95]
Length = 712
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 155/374 (41%), Positives = 226/374 (60%), Gaps = 12/374 (3%)
Query: 179 ETYAKEF--LANAQLKHKIFREDFVIKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLA 235
++Y KE L N +L K E IK YE AE +H GQ R SG+ + H ++LA
Sbjct: 6 KSYEKEVEKLLNVKLTKK---EKERIKIAYELAETSHSGQFRDSGEEFFEHPKSVGLILA 62
Query: 236 AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS 295
+ + + AGLLHD ++D +S D I FG VA++V GV+K+S L R N
Sbjct: 63 GLKMDVDTIIAGLLHDVVEDCGVSIDKIKDLFGIDVANIVSGVTKISNLKLNERLNENDM 122
Query: 296 KTVE-ADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLA 353
K++E + + M AM+ D R +++KLADRLHNM TL+ + K+ A ETL+I+ P+A
Sbjct: 123 KSLEKVETIRKMLFAMSEDIRVIIVKLADRLHNMRTLEFVDRKKQIAKADETLKIYAPIA 182
Query: 354 NRLGISTWKVQLENLCFKHLNPDQHTELSSKLVEC--FDEAMVTSAIEKLEQALKDKNIS 411
+RLGI K +LE+L F++L P+ + +L +K+ E + + + ++Q L ++ I
Sbjct: 183 HRLGIYKMKEELEDLSFRYLYPETYFDLKTKIEEKIRLGQNRLNEYAQIIKQELDNQKIK 242
Query: 412 FLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 471
V GR K LYSI KM++K T+DEI+D LR+I E++ CY L ++H +W+ VPG
Sbjct: 243 ATV-EGRSKHLYSIWDKMIRKGKTLDEIYDYIALRIITEDQNKCYAVLGIIHSIWSPVPG 301
Query: 472 KMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS 531
++KDYI PKFNGY+SLHT V PLE+QIR EMH +AE+G AAHW YKEG Q
Sbjct: 302 RIKDYIATPKFNGYKSLHTTVITHKGDPLEIQIRDWEMHEEAEYGLAAHWVYKEGVSQEK 361
Query: 532 -SFVLQMVEWARWV 544
F+ ++E R++
Sbjct: 362 LKFLTDLMELHRYI 375
>gi|257068567|ref|YP_003154822.1| (p)ppGpp synthetase, RelA/SpoT family [Brachybacterium faecium DSM
4810]
gi|256559385|gb|ACU85232.1| (p)ppGpp synthetase, RelA/SpoT family [Brachybacterium faecium DSM
4810]
Length = 809
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 147/359 (40%), Positives = 216/359 (60%), Gaps = 16/359 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +A+ AE+AHRGQ R SGDPY+ H V A +LA +G+ + V+AA LLHDT++D
Sbjct: 83 ELVRRAYTVAEKAHRGQTRKSGDPYITHPVSVATILAELGSPAEVIAAALLHDTVEDTDY 142
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG +A +V+GV+KL ++ T + +A+ + M +AM+ D R +L
Sbjct: 143 SLERLRAEFGEVIAVMVDGVTKLDKV--------TYGEAAQAETVRKMIVAMSRDVRVLL 194
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHN T +P +R AKETLEI+ PLA+RLG++T K +LE+ F+ L P
Sbjct: 195 IKLADRLHNARTWKYVPAASAERKAKETLEIYAPLAHRLGLNTMKWELEDRSFQVLYPKV 254
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ S + + E +++ ++ + L+ I V GR K YSI+ KM+ +
Sbjct: 255 YEEIVSLVAQHAPAREQYLSTVSSQINEDLRKARIKAEV-TGRPKHYYSIYQKMIVRGRD 313
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+I+D+ G+R++V+ DCY L +H W+ V G+ KDYI PKFN YQSLHT V G
Sbjct: 314 FSDIYDLVGVRVLVDTVRDCYAVLGTLHARWSPVQGRFKDYIALPKFNLYQSLHTTVIGP 373
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ----HSSFVLQMVEWARWVLTWQCE 550
P+EVQIRT+EMH +AE+G AAHW+YK ++ V W R ++ WQ E
Sbjct: 374 TGKPVEVQIRTREMHRRAEYGVAAHWKYKAMSANPGGADAAPVTNDAAWLRQLMDWQKE 432
>gi|342213759|ref|ZP_08706478.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
gi|341597347|gb|EGS39906.1| GTP diphosphokinase [Veillonella sp. oral taxon 780 str. F0422]
Length = 741
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 212/350 (60%), Gaps = 11/350 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A++AH Q RASG+PY+LH + A +L+ + + + + + LLHD ++D +S +
Sbjct: 40 RAFALADKAHAPQKRASGEPYILHPLGVATILSELQIDRSTLVSALLHDVVEDTEISLEE 99
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KL+Q +E + + M LAMA D R V+IKL
Sbjct: 100 IEEQFGPEVAFLVDGVTKLNQFQYQTKEEQ------QIENYRKMILAMAKDVRVVVIKLG 153
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL + K+QR A+ETLEIF PLA+RLGI K +LE+L F++L P+++ +L
Sbjct: 154 DRLHNMRTLKHMRPDKQQRIAQETLEIFAPLAHRLGIFNIKWELEDLSFRYLEPEKYYDL 213
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ E E +V + L+ AL+ +I V GR K YSI+ KM K + +I
Sbjct: 214 VQQMSEKRQAREDIVNDTMNTLKDALEHAHIKADV-KGRPKHFYSIYKKMKKDNRDLSQI 272
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV+ DCY L VH LW +P + KDYI PK N YQSLHT V G P
Sbjct: 273 YDLYAVRVIVDTIPDCYAVLGTVHSLWKPLPYRFKDYIAMPKSNMYQSLHTTVIGTKGQP 332
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM-VEWARWVLTWQ 548
+E+QIRT +MH +E+G AAHWRYKEG+ + V W R VL WQ
Sbjct: 333 VEIQIRTWDMHRVSEYGVAAHWRYKEGNKGKAEADFDAKVGWIRHVLEWQ 382
>gi|317498122|ref|ZP_07956424.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
gi|316894599|gb|EFV16779.1| RelA/SpoT family protein [Lachnospiraceae bacterium 5_1_63FAA]
Length = 765
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 223/352 (63%), Gaps = 10/352 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L L +E A + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLEHSLDSAKEEREAFIQEIVDEVKGHIDHAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEG 341
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + + + + + W R VL WQ
Sbjct: 342 HPFEIQIRTFEMHRVAEYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|52081239|ref|YP_080030.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|319644794|ref|ZP_07999027.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|404490119|ref|YP_006714225.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423683219|ref|ZP_17658058.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
gi|52004450|gb|AAU24392.1| GTP pyrophosphokinase [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52349121|gb|AAU41755.1| GTP pyrophosphokinase RelA [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317392603|gb|EFV73397.1| GTP pyrophosphokinase [Bacillus sp. BT1B_CT2]
gi|383439993|gb|EID47768.1| GTP pyrophosphokinase [Bacillus licheniformis WX-02]
Length = 733
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 215/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
F+ KA+ AE AHR Q R SG+PY++H ++ A +L + + +A G LHD ++D ++
Sbjct: 27 FIKKAYQYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPATIAGGFLHDVVEDTSVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LEDLKEAFNEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + +++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVEEVVNEVKSRVEEVNIK-ADFSGRPKHIYSIYRKMAMQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG-DCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + S + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGIAAHWAYKEGKNANEDSSFDKKLSWFREILEFQNES 375
>gi|404413602|ref|YP_006699189.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
gi|404239301|emb|CBY60702.1| GTP pyrophosphokinase [Listeria monocytogenes SLCC7179]
Length = 738
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/357 (42%), Positives = 221/357 (61%), Gaps = 14/357 (3%)
Query: 201 VIKAFYEAER-AHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
++K YE R +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKNAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|415885635|ref|ZP_11547563.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
gi|387591304|gb|EIJ83623.1| GTP diphosphokinase [Bacillus methanolicus MGA3]
Length = 731
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 216/355 (60%), Gaps = 13/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ A AH Q R SG+PY++H ++ A +LA + + VAAG LHD ++D +
Sbjct: 26 NLVKKAYEFARAAHSDQYRKSGEPYIIHPIQVAGILADLEMDPITVAAGFLHDVIEDTDV 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + F VA LV+GV+KL ++ + E +A+ MF+AMA D R +L
Sbjct: 86 TLEEMREAFNDEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFVAMAQDIRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL LPL K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q
Sbjct: 140 IKLADRLHNMRTLKHLPLEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + IE++ L + +I + GR K +YSI+ KM +
Sbjct: 200 YYRIVNLMKKKRAEREQYLDDVIEEVRNRLNEVSIKAEI-SGRPKHIYSIYRKMALQNKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FNEIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW YKEG ++SSF ++ W R +L +Q
Sbjct: 319 KGDPLEVQIRTFEMHRIAEYGIAAHWAYKEGKSVNENSSFEEKLT-WFREILEFQ 372
>gi|82701185|ref|YP_410751.1| (p)ppGpp synthetase SpoT/RelA [Nitrosospira multiformis ATCC 25196]
gi|82409250|gb|ABB73359.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Nitrosospira multiformis ATCC 25196]
Length = 715
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/361 (41%), Positives = 220/361 (60%), Gaps = 12/361 (3%)
Query: 190 QLKHKIFREDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAG 247
+L + RED + A+ ++ AH GQ R SG+PY+ H + A +L + +S +AA
Sbjct: 22 ELSSYLTREDVSELQNAYLFSQSAHSGQFRQSGEPYISHPLAVASILGKLRLDSQTLAAA 81
Query: 248 LLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMF 307
LLHD ++D +S I FG VA+LV+GVSKL ++ + + +A+ M
Sbjct: 82 LLHDVMEDTHVSKAEIGDRFGKSVAELVDGVSKLDKIEFQSHAD------AQAENFRKML 135
Query: 308 LAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLE 366
LAMA D R +LIKLADRLHNM TL+A+ K++R A+ET+EI+ P+ANRLG++ +L+
Sbjct: 136 LAMARDVRVILIKLADRLHNMRTLEAMRPEKKRRIARETMEIYAPIANRLGLNNIYHELQ 195
Query: 367 NLCFKHLNPDQHTELS--SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYS 424
+L F++L P ++ L+ ++ MVT +E ++Q LK + V GR K LYS
Sbjct: 196 DLSFRYLYPRRYRVLTNATRAARGNRREMVTKILETMKQRLKTAGLDAEV-TGREKQLYS 254
Query: 425 IHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNG 484
I+ KM++K L+ EI DIYG R+IV++ CY AL +H L+ +PGK KDYI PK NG
Sbjct: 255 IYKKMVEKHLSFSEILDIYGFRVIVKDVASCYIALGALHSLYNPIPGKFKDYIAIPKANG 314
Query: 485 YQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWV 544
YQSLH+ + G P+E+QIRT EMH AE G A+HW YK D + ++ +W + +
Sbjct: 315 YQSLHSTLWGPYGTPIEIQIRTPEMHRIAEAGVASHWLYKSSDADLNDLNMKTHQWLQSL 374
Query: 545 L 545
L
Sbjct: 375 L 375
>gi|89100794|ref|ZP_01173647.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
gi|89084497|gb|EAR63645.1| GTP pyrophosphokinase [Bacillus sp. NRRL B-14911]
Length = 731
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 220/358 (61%), Gaps = 13/358 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V KA+ A+ AHR Q R SG+PY++H ++ A +LA + + + VAAG LHD ++D ++
Sbjct: 28 VRKAYEFAKHAHREQYRKSGEPYIIHPIQVAGILADLEMDPSTVAAGFLHDVVEDTEVTL 87
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LIK
Sbjct: 88 ADISEAFNPEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILIK 141
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 142 LADRLHNMRTLKHLPAEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQYY 201
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ + K E + I +++ + + +I L GR K +YSI+ KM + +
Sbjct: 202 RIVNLMKKKRAERELYLEEVIGEMKGKMDEVSIR-ADLSGRPKHIYSIYRKMALQNKQFN 260
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 261 EIYDLLAVRIVVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKANMYQSLHTTVIGPKG 320
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEAMS 553
PLEVQIRT EMH AEFG AAHW YKEG + SSF ++ W R +L +Q ++++
Sbjct: 321 DPLEVQIRTTEMHQIAEFGIAAHWAYKEGKTVNEGSSFEEKLT-WFREILEFQDDSVN 377
>gi|227549163|ref|ZP_03979212.1| GTP pyrophosphokinase [Corynebacterium lipophiloflavum DSM 44291]
gi|227078723|gb|EEI16686.1| GTP pyrophosphokinase [Corynebacterium lipophiloflavum DSM 44291]
Length = 758
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/356 (44%), Positives = 218/356 (61%), Gaps = 18/356 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G R SGDPY+ H + A + IG ++T + A LLHDT++D S
Sbjct: 57 RAYDVAERLHEGVTRKSGDPYITHPLAVATICGEIGMDTTTLVAALLHDTVEDTEYSLAD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ A EA+ + M +AMA D R ++IK+A
Sbjct: 117 LSADFGPEVAKLVDGVTKLDKVALGA--------AAEAETIRKMIVAMAEDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + AKETL++ PLA+RLG++T K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKAKETLDVIAPLAHRLGMATVKWELEDLAFAILYPKKYEEI 228
Query: 382 SSKLVE---CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+ + D A+ +LE LK +IS V+ GR K +SI+ KM+ + DE
Sbjct: 229 VRLVADRAPSRDRAL-GEIKAQLEAELKASSISAEVM-GRPKHYWSIYQKMVVRGHEFDE 286
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I D+ G+R++V+N DCY A+ VVH L++ +PG+ KDYI+ P+F YQSLHT V +
Sbjct: 287 IFDLVGIRVLVDNVHDCYAAIGVVHSLYSVMPGRFKDYISNPRFGVYQSLHTTVMTDSGR 346
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT EMH AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 347 PLEVQVRTHEMHYNAEFGVAAHWRYKETKGSHKGDQAEVDQMA-WMRQLLDWQKEA 401
>gi|407474189|ref|YP_006788589.1| GTP pyrophosphokinase/(p)ppGpp synthetase I [Clostridium acidurici
9a]
gi|407050697|gb|AFS78742.1| GTP pyrophosphokinase/(p)ppGpp synthetase I [Clostridium acidurici
9a]
Length = 721
Score = 273 bits (699), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 212/342 (61%), Gaps = 18/342 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D VIKA++ AE+AH GQ R SG+ Y +H V AM+LA + ++ +AAGL+HD L+D +
Sbjct: 19 DEVIKAYHFAEQAHEGQFRKSGEKYFIHPVNVAMILAELNMDTATIAAGLMHDVLEDTDV 78
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ I F +A+LV+GV+KL +L +E N + + L M +AM+ D R ++
Sbjct: 79 TYETIVEEFSEEIANLVDGVTKLKKLKYKTKEEN------QVENLRKMIIAMSKDIRVII 132
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHN TLD + K++ A ETL+I+ P+ANRLG+S K +LE+L ++++P
Sbjct: 133 IKLADRLHNARTLDFMSDAKQKEKALETLDIYAPIANRLGMSKVKWELEDLSLRYIDPKG 192
Query: 378 HTELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK 431
+ +L K+ E + ++ S EKL++ IS GR K YSI+ KM+
Sbjct: 193 YFDLVEKVSMKRKEREKYIRKIIVSLKEKLDEMEIPNEIS-----GRPKHFYSIYRKMVY 247
Query: 432 KKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTV 491
+ T ++I D+ +R+IV+ +DCY L + H LW +PG+ KDYI PK N YQSLHT
Sbjct: 248 QNKTFEQIFDLTAIRVIVDTVKDCYGVLGIAHTLWKPIPGRFKDYIAMPKPNMYQSLHTT 307
Query: 492 VTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
V G P E+QIRT EMH AE+G AAHW+YKEG ++ F
Sbjct: 308 VIGPQGEPFEIQIRTWEMHKTAEYGIAAHWKYKEGVTKNLGF 349
>gi|377567607|ref|ZP_09796815.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
gi|377535147|dbj|GAB41980.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia terrae NBRC 100016]
Length = 794
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 153/358 (42%), Positives = 211/358 (58%), Gaps = 19/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 90 RAYDVADERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 149
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 150 LEKDFGPEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 201
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTE- 380
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E
Sbjct: 202 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 261
Query: 381 --LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L + D + + + AL I+ V GR K +SI+ KM+ K D+
Sbjct: 262 VRLGADRAPSRDTYLARVRAD-INNALAGARINATV-EGRPKHYWSIYQKMIVKGRDFDD 319
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F Y SLHT V G
Sbjct: 320 IHDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYMSLHTTVIGPEGK 379
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
PLEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 380 PLEVQIRTHEMHRTAEFGIAAHWRYKENGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 437
>gi|226939389|ref|YP_002794462.1| SpoT [Laribacter hongkongensis HLHK9]
gi|226714315|gb|ACO73453.1| SpoT [Laribacter hongkongensis HLHK9]
Length = 724
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 157/383 (40%), Positives = 225/383 (58%), Gaps = 14/383 (3%)
Query: 171 DNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVET 230
D +VEG A+E L K FV AF A AH GQ R SG+PY+ H +
Sbjct: 13 DAMVEGQ----AEELLRTVATYLKPDDLPFVRAAFEFARDAHAGQTRKSGEPYITHPLSV 68
Query: 231 AMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARE 290
A +L ++ +AA LLHDT++D ++ + FG VA+LV+G+SKL +L ++E
Sbjct: 69 AQILTEWKLDAHGLAAALLHDTMEDTGVAKSTLAEKFGKQVAELVDGLSKLERLEYQSKE 128
Query: 291 NNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIF 349
+A+ M LAMA D R ++IKLADRLHNM TLD++ KR+R A ETL+++
Sbjct: 129 AR------QAENFRKMVLAMARDIRVIIIKLADRLHNMRTLDSMREEKRRRIALETLDVY 182
Query: 350 VPLANRLGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKD 407
PLANR+G++ +LE+LCFK+L P++++ L+ + +V + + + L +
Sbjct: 183 TPLANRIGLNKVYRELEDLCFKYLYPNRYSVLAKAVRAARGNRRELVGKILTAIARKLVE 242
Query: 408 KNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWA 467
NI + GR K+LYSI+ KM +K+L+ E+ DIY R+IV + CY AL +H L+
Sbjct: 243 ANIEAGIR-GREKNLYSIYRKMQEKQLSFSEVLDIYAFRVIVNDIPSCYLALGALHSLYK 301
Query: 468 EVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
+PGK KDYI PK NGYQSLHT + G P+EVQIRT++MH AE G A+HW YK GD
Sbjct: 302 PIPGKFKDYIAIPKSNGYQSLHTTLFGPYGTPIEVQIRTRDMHRVAESGVASHWMYKSGD 361
Query: 528 CQHSSFVLQMVEWARWVLTWQCE 550
+ +W + +L Q E
Sbjct: 362 ASLDMARQRTHQWLQDILDIQAE 384
>gi|407799653|ref|ZP_11146531.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
gi|407058130|gb|EKE44088.1| (p)ppGpp synthetase I SpoT/RelA [Oceaniovalibus guishaninsula
JLT2003]
Length = 714
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/376 (40%), Positives = 225/376 (59%), Gaps = 17/376 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
+ +A + H D V +A++ R H GQ R SG+PY H V A +LA +
Sbjct: 15 DLIARIRAYHPTADFDLVRRAYHYGARMHEGQFRHSGEPYFTHPVAVAGILARQRLDDAT 74
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+ LLHDT++D SY+ + R FG +ADLV GV+KL+QL T++++ +A+
Sbjct: 75 IVTALLHDTVEDTRASYEDVERLFGTEIADLVNGVTKLTQLQL------TSTRSKQAENF 128
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+F+AM+ D R +L+KLADRLHNM T++++ +QR A+ET++IF PLA R+G+ +
Sbjct: 129 RKLFIAMSRDLRVILVKLADRLHNMRTIESMRPEGQQRKARETMDIFAPLAGRMGMQWMR 188
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALK---DKNISFLVLCGRH 419
+LE+L FK LNPD + + ++ EA + I+K+ ++ D+ + GR
Sbjct: 189 EELEDLAFKVLNPDGRNSIIRRFIKLQREA--GNVIDKITADIRLELDRAGIEGEVYGRA 246
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +SI KM +KK+ + DIYG R+IV E +CY L V+HQ W VP + KDYI++
Sbjct: 247 KKPFSIWRKMEEKKIGFSRLSDIYGFRIIVGTESECYAVLGVIHQRWRAVPDRFKDYISQ 306
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE 539
PK NGY+S+HT V+G +EVQIRT++MH AE G AAHW Y++G + F V+
Sbjct: 307 PKSNGYRSIHTTVSGRDGKRVEVQIRTRQMHEVAEAGVAAHWSYRDGQRVENPFA---VD 363
Query: 540 WARWV--LTWQCEAMS 553
ARWV L+ Q E+ S
Sbjct: 364 PARWVAMLSEQFESAS 379
>gi|325282797|ref|YP_004255338.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
gi|324314606|gb|ADY25721.1| (p)ppGpp synthetase I, SpoT/RelA [Deinococcus proteolyticus MRP]
Length = 764
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/362 (41%), Positives = 221/362 (61%), Gaps = 34/362 (9%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDA-F 257
D + +A+ A AH G +R SG+ Y+ H V A +LA +G ++T +AAGLLHDT++D
Sbjct: 24 DLIERAYDFAREAHAGVVRKSGEEYITHPVAVATILAELGMDTTSIAAGLLHDTVEDVDG 83
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTAS---KTVEADRLHTMFLAMAD-A 313
++++ I FG V+ +VEG +K+S+LSK + S + ++A+ L M +AM D
Sbjct: 84 VTFEVITAQFGPEVSRIVEGETKVSKLSKAGSQTAEVSDDGRDMQAENLRQMLIAMTDDL 143
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R +++KLADRLHNM T+DA+P K++R ++ET+E+F PLA+RLGI K +LE+L F++L
Sbjct: 144 RIIVVKLADRLHNMRTMDAMPPEKQKRISRETMEVFAPLAHRLGIGQVKWELEDLSFRYL 203
Query: 374 NPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKN-----ISFLVLCGRHKSLYSIH 426
P+++ EL S+L DE +V A E L AL+D ++ + + GR K L+SI
Sbjct: 204 YPEEYAELRSRLRMQLDERDGIVKQAEESLRSALEDDLELPDWVAAIDISGRSKHLWSIF 263
Query: 427 CKMLKKKLTMDEIHDIYGLRLI-----VENEED-----------------CYQALRVVHQ 464
KM ++ +++I D+ LR+I VE E CY + +VH
Sbjct: 264 GKMRREGKALEQIFDLMALRVILTPRRVEAREGTDPERLARAEEMREKRICYHTISIVHS 323
Query: 465 LWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYK 524
LW +PG+ KDYI PK NGYQSLHT V G+ P+E+QIR+ MH AE+G AAHW YK
Sbjct: 324 LWTPLPGRFKDYIAVPKPNGYQSLHTTVIGKSGQPIEIQIRSSRMHEVAEYGVAAHWMYK 383
Query: 525 EG 526
+G
Sbjct: 384 QG 385
>gi|427737096|ref|YP_007056640.1| RelA/SpoT family (p)ppGpp synthetase [Rivularia sp. PCC 7116]
gi|427372137|gb|AFY56093.1| (p)ppGpp synthetase, RelA/SpoT family [Rivularia sp. PCC 7116]
Length = 805
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/395 (43%), Positives = 231/395 (58%), Gaps = 22/395 (5%)
Query: 168 NMEDNIVEGNLETYAKEFLANAQLKHKIFR-------EDFVIKAFYEAERAHRGQMRASG 220
NM +V+ + E+L + L K+ R +D + +AF A H GQMR SG
Sbjct: 53 NMNPTVVDSQINIPLPEWLEDC-LNSKVDRSDPQAADKDLISRAFRFAYHLHEGQMRKSG 111
Query: 221 DPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSK 280
+PY+ H V A +L +G +S ++AAG LHD ++D ++ + I FG V LVEGV+K
Sbjct: 112 EPYICHPVAVAGILRDLGGSSVMIAAGFLHDVVEDTEITIEEIEERFGEEVRRLVEGVTK 171
Query: 281 LSQLSKLARENNTASKT-VEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKR 338
LS++ N SKT +A+ MFLAMA D R +++KLADRLHNM TL+A+P KR
Sbjct: 172 LSKI-------NFKSKTESQAENFRRMFLAMAQDIRVIVVKLADRLHNMRTLEAMPEHKR 224
Query: 339 QRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTS 396
+ A ET EIF PLANRLGI K +LE+L FK+L D + ++ + + E +T+
Sbjct: 225 RAKALETREIFAPLANRLGIWHVKWELEDLAFKYLETDSYRQIQQLVADKRAAREERLTN 284
Query: 397 AIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCY 456
E L LK I + L GR K LYSI+ KM ++ EI D+ LR+IV+ E+CY
Sbjct: 285 VTETLRSRLKKAGIECVDLSGRPKHLYSIYQKMQRQNKEFHEIFDLAALRIIVKTNEECY 344
Query: 457 QALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFG 516
+AL +VH + +PG+ KDYI PK N YQSLHT V G P+EVQIRT EMH AE+G
Sbjct: 345 RALALVHDSFRPIPGRFKDYIGLPKPNRYQSLHTGVIGPWGRPMEVQIRTLEMHRIAEYG 404
Query: 517 FAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQ 548
AAHW YKE ++ + E W R +L WQ
Sbjct: 405 IAAHWIYKESGGSSNTQLTAADEKFTWLRQLLEWQ 439
>gi|442555432|ref|YP_007365257.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
gi|441492879|gb|AGC49573.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Lawsonia
intracellularis N343]
Length = 733
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 217/352 (61%), Gaps = 10/352 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH GQ+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S
Sbjct: 34 LVQKAYVYAAAAHEGQLRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCS 93
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG VAD+V GV+K+S +S ++E +A+ M LAM+ D R ++
Sbjct: 94 LEDIETEFGKQVADIVNGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIV 147
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +
Sbjct: 148 KLADRLHNMRTLNFQKPHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIY 207
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
T++S+ + + ++ I K+ +A+ KN + GR K +YSIH KM+++ LT+
Sbjct: 208 TQISTWMHSNRVVERNLIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTL 266
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D +HDI R+IV+ DCY L ++H W + G+ KDYI+ PK NGYQSLHT V G
Sbjct: 267 DSMHDILAFRVIVDTISDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTVMGPE 326
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
+E+QIRT EMH AE G A+HW YKE + + + EW R VL Q
Sbjct: 327 GERIEIQIRTNEMHKLAEQGVASHWLYKERNHSVNLSDVPQFEWLREVLDRQ 378
>gi|409358378|ref|ZP_11236741.1| GTP diphosphokinase [Dietzia alimentaria 72]
Length = 714
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 149/358 (41%), Positives = 216/358 (60%), Gaps = 16/358 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AER H G R SGDPY+ H + A + A +G ++T + A LLHDT++D S
Sbjct: 10 LLARAYALAERQHDGVYRKSGDPYITHPLAVATICAEMGMDTTTLVAALLHDTVEDTDYS 69
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ + FG VA LV+GV+KL ++ + EA+ + M +AMA D R ++I
Sbjct: 70 LEALSGDFGGEVAHLVDGVTKLDKVE--------FGEAAEAETIRKMIIAMAHDPRVLVI 121
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ DRLHNM T+ LP K+ + A+ETLE+ PLA+RLG++T K +LE+L F L P ++
Sbjct: 122 KVGDRLHNMRTMRFLPPEKQVKKARETLEVIAPLAHRLGMATIKWELEDLAFAILEPKKY 181
Query: 379 TELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + + + ++ L+ NI V GR K +SI+ KM+ +
Sbjct: 182 QEIVRLVADRAPSRDVYLATVTSRVTSELEKANIQARV-EGRPKHYWSIYQKMIVRGREF 240
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEIHD+ G+R++ E+ DCY A+ VVH W +PG+ KDYI +P+F Y+SLHT V G
Sbjct: 241 DEIHDLVGIRVLCEDVRDCYAAIGVVHSTWKPMPGRFKDYIAQPRFGVYRSLHTTVIGPD 300
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
PLE+QIRT EMH AE+G AAHWRYKE +H S V +M W R +L+WQ EA
Sbjct: 301 GKPLEIQIRTHEMHRNAEYGIAAHWRYKETRGKHHGDPSEVDEMA-WMRQLLSWQREA 357
>gi|169824507|ref|YP_001692118.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302380745|ref|ZP_07269210.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|303233691|ref|ZP_07320345.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|417926542|ref|ZP_12569940.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
gi|167831312|dbj|BAG08228.1| GTP pyrophosphokinase [Finegoldia magna ATCC 29328]
gi|302311688|gb|EFK93704.1| putative GTP diphosphokinase [Finegoldia magna ACS-171-V-Col3]
gi|302495125|gb|EFL54877.1| putative GTP diphosphokinase [Finegoldia magna BVS033A4]
gi|341589057|gb|EGS32424.1| GTP diphosphokinase [Finegoldia magna SY403409CC001050417]
Length = 723
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 170/482 (35%), Positives = 251/482 (52%), Gaps = 75/482 (15%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A+ RAH GQ R SG+PY +H + A +LA++ + + AGL HD ++D +
Sbjct: 25 DEITRAYGYMVRAHEGQFRNSGEPYAIHPMAVAKILASLNMDDATIIAGLFHDVVEDTEI 84
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+Y+ + F +ADLV+GV+KL Q+ +++N +A+ L M LAMA D R ++
Sbjct: 85 TYEDLEYLFSKEIADLVDGVTKLKQIKFKTKKDN------QAENLKKMILAMAKDIRVII 138
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKL+DRLHNM TL+ + K+ A E LEI+ PLA+RLG+ST K +LE+L K+L P+
Sbjct: 139 IKLSDRLHNMRTLEYMTREKQIEKANEVLEIYAPLAHRLGMSTIKWELEDLSLKYLEPNI 198
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ +K+ E E+ + + I + + L+ NI + GR KS++SI+ KM KK L
Sbjct: 199 YQDIVNKINETRQQRESQIQNIIRQFQNELEKCNIKAEIF-GRPKSIFSIYKKMYKKHLA 257
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI D+ +R+IV E +CY L + H+ + +P KDYI PK N YQSLHT +
Sbjct: 258 FEEIKDLSAIRVIVNKESECYDVLGIAHRFFRPIPNTFKDYIATPKPNMYQSLHTTILAH 317
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
E+QIRT EMH +E+G AAHW+YKEG S + W R ++ WQ KD
Sbjct: 318 DGRTYEIQIRTWEMHKTSEYGIAAHWKYKEGTSNKKSKYDSKLAWLREIMDWQ-----KD 372
Query: 556 RSCVGNGDSIKPPCTFPSH-ADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTVM 614
+ DS + F A+D F Y P K V + P+ ST +
Sbjct: 373 YT-----DSKEFMDLFKEEFANDEVFVYSP----------------KGDVMDLPSGSTPI 411
Query: 615 DLLERAGRGSSRWSPYGFPLKEELRPRLNHKAVGDPRC--------------KLKMGDVV 660
D R H AVG+ +C KLK G+VV
Sbjct: 412 DFAYRV-----------------------HSAVGN-KCVGAKVDGKIVPLTYKLKTGNVV 447
Query: 661 EL 662
E+
Sbjct: 448 EI 449
>gi|421867271|ref|ZP_16298930.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
gi|358072685|emb|CCE49808.1| GTP pyrophosphokinase ppGpp synthetase II /
Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia H111]
Length = 788
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 NELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YS++ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G S + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|405375362|ref|ZP_11029395.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Chondromyces apiculatus DSM 436]
gi|397086374|gb|EJJ17492.1| Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 740
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/351 (41%), Positives = 216/351 (61%), Gaps = 13/351 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
LS KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 198 FFALSEKLNKRKKEREKYIEETCDVIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 256
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G
Sbjct: 257 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGP 316
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
+EVQIRT+EMH AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 317 LSERVEVQIRTEEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 367
>gi|167767126|ref|ZP_02439179.1| hypothetical protein CLOSS21_01644 [Clostridium sp. SS2/1]
gi|167711101|gb|EDS21680.1| RelA/SpoT family protein [Clostridium sp. SS2/1]
gi|291559545|emb|CBL38345.1| (p)ppGpp synthetase, RelA/SpoT family [butyrate-producing bacterium
SSC/2]
Length = 765
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/352 (40%), Positives = 223/352 (63%), Gaps = 10/352 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ A +AH Q R SG+PY++H + A++LA + + + AGLLHD ++D ++
Sbjct: 48 VERAYKVAYKAHEKQKRKSGEPYIIHPICVAIILAELELDKETIMAGLLHDVVEDTETTH 107
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I R FG VA LV+GV+KL QLS + V+A+ L MFLAMA D R +LIK
Sbjct: 108 EDIVRDFGEEVAQLVDGVTKLGQLS-----YSKDKIEVQAENLRKMFLAMAKDIRVILIK 162
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ + K++ ++ET++I+ P+A+RLGIS KV+L++L ++L PD +
Sbjct: 163 LADRLHNMRTMQFMRPEKQKEKSRETMDIYAPIAHRLGISKIKVELDDLALRYLKPDVYE 222
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L L +E A + +++++ + I + GR K ++SI+ KM+ + T+D
Sbjct: 223 DLERSLDSAKEEREAFIQEIVDEVKGHIDRAGIKAEI-DGRVKHMFSIYKKMVNQHKTID 281
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D++ +R+ V+ +DCY AL ++H+++ +PG+ KDYI PK N YQSLHT + G
Sbjct: 282 QIYDLFAVRIKVDTVKDCYAALGIIHEMYKPIPGRFKDYIAMPKPNMYQSLHTTLIGPEG 341
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVLQMVEWARWVLTWQ 548
P E+QIRT EMH AE+G AAHW+YKE + + + + + W R VL WQ
Sbjct: 342 HPFEIQIRTFEMHRVAEYGIAAHWKYKENNNTKGLNKEEEKLSWLREVLEWQ 393
>gi|418606224|ref|ZP_13169516.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|418621259|ref|ZP_13184038.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
gi|374409014|gb|EHQ79818.1| GTP diphosphokinase [Staphylococcus epidermidis VCU057]
gi|374829871|gb|EHR93665.1| GTP diphosphokinase [Staphylococcus epidermidis VCU123]
Length = 590
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/331 (41%), Positives = 211/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTSY 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F +A +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA +T+AI K++ + N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGRPKHIYSIYRKMIKQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 319 NGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|94986614|ref|YP_594547.1| guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
gi|94730863|emb|CAJ54226.1| Guanosine polyphosphate pyrophosphohydrolases/synthetases [Lawsonia
intracellularis PHE/MN1-00]
Length = 731
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 217/352 (61%), Gaps = 10/352 (2%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A AH GQ+R SG+PYL H + A +L+ +G ++ + A LLHDT++D S
Sbjct: 32 LVQKAYVYAAAAHEGQLRLSGEPYLSHPLAVAEMLSEMGFDAYAIMAALLHDTVEDTKCS 91
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG VAD+V GV+K+S +S ++E +A+ M LAM+ D R ++
Sbjct: 92 LEDIETEFGKQVADIVNGVTKISMMSFESKEEQ------QAENFRKMILAMSQDIRVPIV 145
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ KRQ A+ET++I+ PLANRLG+ K++LE+L FK+L+PD +
Sbjct: 146 KLADRLHNMRTLNFQKPHKRQSIAQETMDIYAPLANRLGLHRIKLELEDLSFKYLHPDIY 205
Query: 379 TELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
T++S+ + + ++ I K+ +A+ KN + GR K +YSIH KM+++ LT+
Sbjct: 206 TQISTWMHSNRVVERNLIERIISKI-KAILHKNGLKGTVQGRVKHVYSIHKKMVEQHLTL 264
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
D +HDI R+IV+ DCY L ++H W + G+ KDYI+ PK NGYQSLHT V G
Sbjct: 265 DSMHDILAFRVIVDTISDCYAVLGLLHSQWKPLHGRFKDYISMPKVNGYQSLHTTVMGPE 324
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
+E+QIRT EMH AE G A+HW YKE + + + EW R VL Q
Sbjct: 325 GERIEIQIRTNEMHKLAEQGVASHWLYKERNHSVNLSDVPQFEWLREVLDRQ 376
>gi|403379224|ref|ZP_10921281.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus sp. JC66]
Length = 725
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 217/357 (60%), Gaps = 17/357 (4%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
IK YE AE+AH GQ+R SG+PY+LH + A ++ + + T V A LLHD ++D +S
Sbjct: 22 IKEAYEFAEKAHHGQVRKSGEPYILHPLAVADIVVNMQMDVTSVIAALLHDVVEDTTVSL 81
Query: 261 DYIFRTFGAGVADLVEGVSKLSQL---SKLARENNTASKTVEADRLHTMFLAMA-DARAV 316
D + FG A LV+G++KL ++ SK ++N K MF+AMA D R +
Sbjct: 82 DTLKEHFGETCAMLVDGLTKLEKIKFKSKQEQQNENYRK---------MFVAMAQDIRVI 132
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
LIKLADRLHNM TL ++R A ETLEIF P+A+RLGIS K ++E++ ++LNP
Sbjct: 133 LIKLADRLHNMRTLKYQSEESQRRIADETLEIFCPIAHRLGISAIKWEMEDIALRYLNPQ 192
Query: 377 QHTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ +++ + + E + I K+++ + + I + GR K +YSI+ KM +
Sbjct: 193 KYYRIANLMQKKRTEREQYIKDVIIKIKEKVSEMGIESDI-SGRPKHIYSIYKKMTARGK 251
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+IV+N +DCY L ++H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 252 QFNEIYDLLAIRVIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIG 311
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH +E+G AAHW YKEG S ++ + W R +L Q EA
Sbjct: 312 PKGEPLEVQIRTWEMHRTSEYGIAAHWAYKEGSAVPSGSFMEKMNWFREILELQNEA 368
>gi|443628964|ref|ZP_21113301.1| putative GTP pyrophosphokinase [Streptomyces viridochromogenes
Tue57]
gi|443337562|gb|ELS51867.1| putative GTP pyrophosphokinase [Streptomyces viridochromogenes
Tue57]
Length = 845
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 127 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQ 186
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 187 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 238
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 239 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 298
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 299 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 354
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 355 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 414
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S + L + W
Sbjct: 415 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKIRTDAPKSSGKGKDDHLNDMAWL 474
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 475 RQLLDWQKE 483
>gi|384165231|ref|YP_005546610.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
gi|328912786|gb|AEB64382.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens LL3]
Length = 734
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|188585914|ref|YP_001917459.1| (p)ppGpp synthetase I SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350601|gb|ACB84871.1| (p)ppGpp synthetase I, SpoT/RelA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 729
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 152/353 (43%), Positives = 217/353 (61%), Gaps = 14/353 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF A H Q R SG+ Y++H +E A++LA + + ++AGLLHD ++D + +
Sbjct: 30 RAFEFARSYHNDQKRVSGEEYIVHPIEVALVLADLELDLDTISAGLLHDVMEDTPATREE 89
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG + LV+GV+KLS+L+ +E + +A+ L MF AMA D R +LIKLA
Sbjct: 90 LEELFGDEITLLVDGVTKLSRLNFKTKEEH------QAENLRKMFFAMANDIRVILIKLA 143
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM TL+ LP K++ AKET+EI+ PLANRLGI K +LE+L F+++ P+Q+ L
Sbjct: 144 DRTHNMRTLNYLPERKQKEIAKETMEIYAPLANRLGIYKIKWELEDLAFRYIEPEQYYYL 203
Query: 382 SSKLVECFDEAMVTSAIEKLEQALKDKNISFLV---LCGRHKSLYSIHCKMLKKKLTMDE 438
+ ++V+ E I+K++ L+DK + + GR K LYSI+ KM K ++E
Sbjct: 204 ADRIVQKRMER--EEYIKKIKVDLRDKLKEMGIDGEIHGRPKHLYSIYSKMKKTGKDLNE 261
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D+ LR+IV N +DCY L VH +W VPG+ KDYI PK N YQSLHT V
Sbjct: 262 IYDLIALRIIVNNVKDCYAVLGTVHTMWKPVPGRFKDYIAVPKSNMYQSLHTTVLCPQGN 321
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT +MH AE+G AAHW+YKE + F + V W R +L WQ E
Sbjct: 322 LVEIQIRTWDMHKTAEYGIAAHWKYKE-NTDDKKFA-EKVSWFRQLLEWQQET 372
>gi|417007457|ref|ZP_11945369.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
gi|328467645|gb|EGF38700.1| ppGpp synthetase [Lactobacillus helveticus MTCC 5463]
Length = 746
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 144/335 (42%), Positives = 205/335 (61%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVAFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++ + ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|57233675|ref|YP_180760.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
gi|57224123|gb|AAW39180.1| GTP pyrophosphokinase [Dehalococcoides ethenogenes 195]
Length = 728
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 156/350 (44%), Positives = 215/350 (61%), Gaps = 22/350 (6%)
Query: 212 HRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGV 271
H GQMR SG+P++ H + A+ LA + +S +AA LLHD +DA +S + I + FGA V
Sbjct: 33 HTGQMRKSGEPFIEHPLNVAITLADLQLDSATLAAALLHDVPEDAHISLEQIEKKFGADV 92
Query: 272 ADLVEGVSKLSQLS-----KLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLH 325
A LV+GV+KLS+L+ + AR + +A+ L M +AM+ D R V IKLADR H
Sbjct: 93 AKLVDGVTKLSKLALGPGIEDARRPGGNASLRQAENLRKMLVAMSEDLRVVFIKLADRFH 152
Query: 326 NMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS--- 382
NM TL AL KR+ AKET+EI+ PLA+RLGI K QLE+L F++L+P + +++
Sbjct: 153 NMRTLQALSAEKRRSIAKETMEIYAPLAHRLGIWELKWQLEDLAFRYLDPRHYRQVANLV 212
Query: 383 -SKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLK---KKLTMDE 438
SKL + + SAI Q+ +KN + L GR K LYSI+ KM K + ++
Sbjct: 213 DSKLAQRKNYIEHVSAIL---QSEFEKNGLKVELSGRPKHLYSIYQKMEKYASQGKQFED 269
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D+ LR++V + DCY A+ +VH LW +PG DYI PK NGYQSLHT V G
Sbjct: 270 IYDVLALRVLVNDIPDCYHAIGIVHSLWHPIPGAFDDYIANPKPNGYQSLHTAVMSLGTT 329
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWAR 542
PLEVQ+RT +MH AE+G AAHWRYK + +F + Q++EW R
Sbjct: 330 PLEVQVRTYQMHHIAEYGVAAHWRYKTAGKEDVNFEDRIGWLRQLIEWHR 379
>gi|398307316|ref|ZP_10510902.1| RelA/SpoT family protein [Bacillus vallismortis DV1-F-3]
Length = 734
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/360 (41%), Positives = 216/360 (60%), Gaps = 19/360 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV +A+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVERAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLV------ECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
+ + + E + E +V +++E+ + S GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVEEVVNEVKKRVEEVHIKADFS-----GRPKHIYSIYRKMVLQ 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V
Sbjct: 256 NKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTV 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
G PLEVQIRT EMH AE+G AAHW YKEG + + W R +L +Q E+
Sbjct: 316 IGPKGDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAASEGATFEKKLSWFREILEFQNES 375
>gi|308174461|ref|YP_003921166.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens DSM 7]
gi|307607325|emb|CBI43696.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens DSM
7]
Length = 734
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/356 (41%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|229820490|ref|YP_002882016.1| (p)ppGpp synthetase I SpoT/RelA [Beutenbergia cavernae DSM 12333]
gi|229566403|gb|ACQ80254.1| (p)ppGpp synthetase I, SpoT/RelA [Beutenbergia cavernae DSM 12333]
Length = 790
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 211/357 (59%), Gaps = 18/357 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+AH GQ+R SGDPY+ H V A +LA +G +AA LLHDT++D S D
Sbjct: 66 RAYAVAEKAHTGQLRKSGDPYITHPVAVATILAELGMTPPTLAAALLHDTVEDTPYSLDS 125
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG + LV+GV+KL ++ T +A+ + M +AMA D R ++IKLA
Sbjct: 126 LRADFGDEITLLVDGVTKLDKV--------TFGDAAQAETVRKMVVAMARDIRVLVIKLA 177
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN T + QR A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 178 DRLHNARTWRYVSQESAQRKARETLEIYAPLAHRLGMNTIKWELEDLSFAALYPKVYDEI 237
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E E + + E++ LK I V GR K YSI+ KM+ + DEI
Sbjct: 238 VRLVAERAPAREEYLATVREQVTADLKSAKIRATV-TGRPKHYYSIYQKMIVRGRDFDEI 296
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G+R++V++ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G P
Sbjct: 297 YDLVGVRVLVDSLRDCYAALGALHSRWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPGGKP 356
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE------GDCQHSSFVLQMVEWARWVLTWQCE 550
+E+QIR++EMH +AE+G AAHW+YKE G + + W R ++ WQ E
Sbjct: 357 VEIQIRSQEMHRRAEYGVAAHWKYKESPSAGRGKEKGGGAGTGEMPWLRQLIDWQQE 413
>gi|428297512|ref|YP_007135818.1| (p)ppGpp synthetase I SpoT/RelA [Calothrix sp. PCC 6303]
gi|428234056|gb|AFY99845.1| (p)ppGpp synthetase I, SpoT/RelA [Calothrix sp. PCC 6303]
Length = 758
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/357 (42%), Positives = 214/357 (59%), Gaps = 14/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF A + H+GQ R SG+PY+ H V A LL +G + ++AAG LHD ++D +
Sbjct: 42 DLICRAFIFAYQLHQGQYRKSGEPYIYHPVAVAGLLRDLGGSPAMIAAGFLHDVVEDTEV 101
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTV-EADRLHTMFLAMA-DARAV 316
+ + I FG V LVEGV+KLS++ N SKT +A+ MFLAMA D R +
Sbjct: 102 TVEDIESKFGEEVRRLVEGVTKLSKI-------NFKSKTEGQAENFRRMFLAMAQDIRVI 154
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
++KLADRLHNM T++ + R+R A+ET +I+ PLANRLGI +K +LE+L FK+L P
Sbjct: 155 VVKLADRLHNMRTMEVMSEESRRRNAQETRDIYAPLANRLGIWRFKWELEDLAFKYLEPQ 214
Query: 377 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ + E D E + + + L + + I + GR K LYSI KM ++
Sbjct: 215 SFREMQKHVAEKRDAREDRLKTVSDMLRTRMVEAGIQCTDISGRPKHLYSIFQKMQRQNK 274
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+IV E+CY+AL V+H ++ +PG+ KDYI PK N YQSLHT V
Sbjct: 275 EFNEIYDLAAIRVIVTTNEECYRALAVLHDVFRPIPGRFKDYIGLPKSNRYQSLHTGVIS 334
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---GDCQHSSFVLQMVEWARWVLTWQ 548
PLE QIRT EMH AE+G AAHW+YKE + +S + W R +L WQ
Sbjct: 335 PWGRPLEAQIRTLEMHRIAEYGIAAHWKYKETGGSNFTQTSPSDEKFTWVRQLLEWQ 391
>gi|418051193|ref|ZP_12689278.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium rhodesiae JS60]
gi|353184850|gb|EHB50374.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium rhodesiae JS60]
Length = 783
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 148/358 (41%), Positives = 216/358 (60%), Gaps = 18/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 78 RAYEVAEAKHADQLRRSGDPYITHPLAVANILAELGMDTTALVAALLHDTVEDTGYAMEA 137
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ E + + M +AMA D R ++IK+A
Sbjct: 138 LTADFGEEVAHLVDGVTKLDKVA--------LGTAAEGETIRKMIIAMARDPRVLVIKVA 189
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 190 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 249
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ AL IS V GR K +SI+ KM+ K D+I
Sbjct: 250 VRLVADRAPSRDTYLAKVRAEITSALSGMKISATV-EGRPKHYWSIYQKMIVKGRDFDDI 308
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW +PG+ KDYI +P+F YQSLHT V G P
Sbjct: 309 HDLVGVRILCDEIRDCYAAVGVVHSLWQPMPGRFKDYIAQPRFGVYQSLHTTVVGPEGKP 368
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE + +++ + + W R +L WQ EA
Sbjct: 369 LEVQIRTRDMHDTAEFGIAAHWRYKESKGRNGLPAGYTAAEIDDMAWMRQLLDWQREA 426
>gi|381151624|ref|ZP_09863493.1| (p)ppGpp synthetase, RelA/SpoT family [Methylomicrobium album BG8]
gi|380883596|gb|EIC29473.1| (p)ppGpp synthetase, RelA/SpoT family [Methylomicrobium album BG8]
Length = 722
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/357 (40%), Positives = 218/357 (61%), Gaps = 12/357 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D ++A+ + AH GQ R SG+ Y+ H V A+ LA + ++ + A +LHD ++D +
Sbjct: 35 DDCVRAYEFSAAAHSGQFRKSGEAYICHPVAVAISLAEMRMDANCIMAAILHDVIEDTPI 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + F VA+LV+GV+KL+++ ++R +A+ + MF+AM D R ++
Sbjct: 95 SKAELAAEFSPDVAELVDGVTKLTKIDGISRAE------AQAENVRKMFMAMTRDLRIIM 148
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL +P K++R AKETL+I+ PLANRLG++ + LE L F+ + P +
Sbjct: 149 VKLADRLHNMQTLGVMPSEKKRRIAKETLDIYAPLANRLGMNNIQQHLEVLSFEAMYPRR 208
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLC---GRHKSLYSIHCKMLKKKL 434
+ L + + + + T I +E ++K++ ++C GR K+LYSI+ KM KK+
Sbjct: 209 YAILKAAVKKTRGSGLKT--INTVENSVKNRMSQADIVCEVSGREKNLYSIYTKMRHKKI 266
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++ +I D+Y R+ V+ +DCY+ + VVH L+ PG+ KDYI PK NGYQSLHT + G
Sbjct: 267 SLPDIFDVYAFRICVDTIDDCYRTIGVVHSLYNPKPGRFKDYIALPKANGYQSLHTTLIG 326
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
G VPLE+QIRT EMH AE G AAHW YK D + F + EW + +L Q A
Sbjct: 327 PGGVPLEIQIRTHEMHRMAESGIAAHWLYKSDDDRQEKFQKRANEWLKDILEIQKSA 383
>gi|295396086|ref|ZP_06806269.1| GTP diphosphokinase [Brevibacterium mcbrellneri ATCC 49030]
gi|294971027|gb|EFG46919.1| GTP diphosphokinase [Brevibacterium mcbrellneri ATCC 49030]
Length = 746
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/375 (40%), Positives = 216/375 (57%), Gaps = 31/375 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ ++KA+ AE+AHRGQ R SGDPY+ H V A +LA IG +AA LLHDT++D
Sbjct: 35 NIILKAYRVAEKAHRGQTRKSGDPYITHPVAVATILAEIGMMPVTLAAALLHDTVEDTDY 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
D FG +A +V+GV+KL ++ A +++ + M +AM+ D R ++
Sbjct: 95 GMDQCREEFGDEIALMVDGVTKLDKIQYGA--------AAQSETVRKMIVAMSRDIRVLV 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHN T +P +R A+ETL+IF PLA+RLG++T K +LE+L F+ L P
Sbjct: 147 IKLADRLHNARTWKYVPASSSERKARETLDIFAPLAHRLGMNTIKWELEDLSFQVLYPKV 206
Query: 378 HTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
++E+ + E E + + ++L + L I + GR K YSI+ KM+ +
Sbjct: 207 YSEIVRMVAERTPEREKYLATVSKELGRELTGAKIE-ATITGRPKHYYSIYQKMVVRGHE 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+I+D+ G+R++VE E +CY L +VH W+ V G+ KDYI PKFN YQSLHT V G
Sbjct: 266 FADIYDLVGVRVLVETERECYAVLGIVHAKWSPVAGRFKDYIAMPKFNMYQSLHTTVIGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE---------------GDCQHSSFVLQMVEW 540
P+E+QIRT EMH +AEFG AAHW+YK+ GD + V+W
Sbjct: 326 TGKPVEIQIRTHEMHRRAEFGVAAHWKYKDRRKSGGAASGRMAKVGDAGE----VDQVQW 381
Query: 541 ARWVLTWQCEAMSKD 555
R +L WQ E D
Sbjct: 382 LRQLLDWQREVTDPD 396
>gi|453077480|ref|ZP_21980226.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
gi|452759155|gb|EME17528.1| GTP diphosphokinase [Rhodococcus triatomae BKS 15-14]
Length = 770
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 69 RAYDVAEERHADQKRKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQ 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ EA+ + M +AMA D R ++IK+A
Sbjct: 129 LTDEFGEEVAHLVDGVTKLDKV--------VLGHAAEAETIRKMIIAMARDPRVLVIKVA 180
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 181 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEI 240
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L IS V GR K +SI+ KM+ K D+I
Sbjct: 241 VRLVADRAPSRDTYLAKVRAEINATLTASRISATV-EGRPKHYWSIYQKMIVKGRDFDDI 299
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 300 HDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 359
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +H S ++ + W R +L WQ EA
Sbjct: 360 LEVQIRTRDMHRTAEFGIAAHWRYKETKGKHGSDTAEVDDMAWMRQLLDWQREA 413
>gi|372487190|ref|YP_005026755.1| RelA/SpoT family (p)ppGpp synthetase [Dechlorosoma suillum PS]
gi|359353743|gb|AEV24914.1| (p)ppGpp synthetase, RelA/SpoT family [Dechlorosoma suillum PS]
Length = 743
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 218/354 (61%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+ +AF E AHRGQ R SG+PY+ H + A +A +ST + A LLHDT++D +S
Sbjct: 59 IKEAFAFGEAAHRGQKRLSGEPYITHPLAVAGAIAEWRLDSTAIIAALLHDTMEDTGISK 118
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG GVADLV+G+SKL ++ ++ + +A+ M LAMA D R +LIK
Sbjct: 119 EELTERFGKGVADLVDGLSKLDKI------EFSSYQEAQAENFRKMLLAMAKDLRVILIK 172
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
L DRLHNM TL + KR+R A ETLEI+ P+ANRLG++T +L++L FKH +P ++
Sbjct: 173 LTDRLHNMQTLGCMRPDKRRRIALETLEIYAPIANRLGLNTVYRELQDLSFKHTHPMRYQ 232
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L ++ +++ ++ ++ ++D I V GR KSLYSI+ KM++K+L+
Sbjct: 233 VLLKAVMAARGNRREVLSKILDGVQSKMRDSGIEAQVF-GREKSLYSIYRKMVEKRLSFS 291
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ DIYG R++V++ CY L +H L+ +PGK KDYI PK NGYQSLHT + G
Sbjct: 292 QVLDIYGFRVVVKDVPSCYLGLGALHALYKPLPGKFKDYIAIPKANGYQSLHTTLIGPYG 351
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
+P+EVQ+RT+EMH A+ G A+HW YK+ + + Q W + +L Q A
Sbjct: 352 MPVEVQLRTEEMHHMAQEGVASHWLYKDTEKSAAELQYQTHRWLQSLLELQSTA 405
>gi|291450322|ref|ZP_06589712.1| ppGpp synthetase [Streptomyces albus J1074]
gi|291353271|gb|EFE80173.1| ppGpp synthetase [Streptomyces albus J1074]
Length = 740
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 154/367 (41%), Positives = 217/367 (59%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 26 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDA 85
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 86 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 137
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 138 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 197
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 198 VRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 253
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 254 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 314 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKTGKEDAVNDMAWLRQ 373
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 374 LLDWQKE 380
>gi|395240870|ref|ZP_10417894.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475652|emb|CCI87871.1| GTP diphosphokinase [Lactobacillus gigeriorum CRBIP 24.85]
Length = 748
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 208/335 (62%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ A +AH GQ RASG PY++H + A LA +G + +AAG LHDT++D ++
Sbjct: 30 FVEHAYDFANKAHEGQFRASGQPYIIHPTQVAGTLANLGLDPDTIAAGFLHDTVEDTPVT 89
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG VA +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 90 NDDIKNIFGEDVAFIVDGVTKLNKYQY------QSHQEFLAENHRKMLIAMAKDLRVIMV 143
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL+ L K++R A ET++I+ PLA+RLGI + K +LE++ F +LNPD +
Sbjct: 144 KLADRLHNMHTLEHLRPDKQRRIASETMDIYAPLADRLGIGSIKWELEDISFHYLNPDAY 203
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
++V D E ++ AI +++ L I + + GR K +YSI+ KM+ K
Sbjct: 204 Y----RIVGLMDVKRSERERYISDAISVMKKTLDSLGIQYQIY-GRPKHIYSIYKKMVNK 258
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
++I+D+ +R++V+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 259 HKDFEDIYDLLAVRVLVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAVPKVNGYQSLHTTI 318
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 319 IGPGGKPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 353
>gi|359423647|ref|ZP_09214774.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
gi|358241005|dbj|GAB04356.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia amarae NBRC 15530]
Length = 792
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 215/359 (59%), Gaps = 19/359 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 86 RAYDVADERHAGQTRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLEQ 145
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FGA VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 146 LEAEFGAEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 197
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 198 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 257
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 258 VRLVADRAPSRDTYLARVRADITNALAATRIT-AVVEGRPKHYWSIYQKMIVKGRDFDDI 316
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 317 HDLVGVRILCDEVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 376
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKE------GDCQHSSFV-LQMVEWARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE G + S + + W R +L WQ EA
Sbjct: 377 LEVQIRTHEMHRTAEFGIAAHWRYKESGYKSKGGSRKSDIAEVDDMAWMRQLLDWQREA 435
>gi|322515562|ref|ZP_08068543.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
gi|322118365|gb|EFX90631.1| guanosine-3,5-bis 3-pyrophosphohydrolase [Actinobacillus ureae ATCC
25976]
Length = 568
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 172/463 (37%), Positives = 248/463 (53%), Gaps = 24/463 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +AF A AH GQ R+SG+PY+ H V A ++A + + V A LLHD ++D
Sbjct: 21 ELVKRAFVIARDAHEGQTRSSGEPYITHPVAVASIIAEMKLDHEAVMAALLHDVIEDTPY 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA VA++V+GVSKL +L R+ + + M LAM D R VL
Sbjct: 81 TEEQLAAEFGASVAEIVQGVSKLDKLKFRTRQE------AQVENFRKMILAMTKDIRVVL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADR HNM TL L KR+R AKETLEI+ PLA+RLGI K +LENLCF+ ++P +
Sbjct: 135 IKLADRTHNMRTLGVLRPDKRRRIAKETLEIYSPLAHRLGIEHLKNELENLCFQAMHPHR 194
Query: 378 HT--ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + + +++S +++ L + I V GR K LYS++ KM ++
Sbjct: 195 YRVLRMAIDMARGTRQDLISSISHEIQSRLDETGIKGRV-YGREKHLYSLYEKMRQRDQH 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
I DIY R++VEN ++CY+ L +H L+ P K++DYI PK NGYQSLHT + G
Sbjct: 254 FHSILDIYAFRVVVENLDNCYRVLGQMHSLYKPRPYKIRDYIAVPKSNGYQSLHTSMIGH 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
VP+EVQIRT++M L AE G AAHWRY E +S + +W R ++ Q A + D
Sbjct: 314 KGVPIEVQIRTEDMDLMAELGVAAHWRYTEDQTTATSVQQKAQQWLRSIIELQQSAGNSD 373
Query: 556 ------RSCVGNGD-SIKPP----CTFPSHADDCPFSYKPQCS-HDGPVFVIMIENDKMS 603
+S + + D + P P+ A F+Y D V I+ N
Sbjct: 374 EFIENVKSDLFSDDIYVFTPKGRIVELPAKATAIDFAYAVHSDIGDRCVGAIVDRNPYPI 433
Query: 604 VQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK--EELRPRLNH 644
Q + TV L E+ R S W + K ++R L H
Sbjct: 434 SQPLQSGQTVEILTEQGKRPSPSWLTFVVSAKARSKIRTALKH 476
>gi|408356412|ref|YP_006844943.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
gi|407727183|dbj|BAM47181.1| GTP pyrophosphokinase [Amphibacillus xylanus NBRC 15112]
Length = 729
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 207/330 (62%), Gaps = 10/330 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A +AH Q R SG+PY++H V+ A +LA +G ++ +A G LHD ++D +
Sbjct: 26 LIRRAFEYAYKAHENQYRRSGEPYIIHPVQVASILAKLGLDAETIAGGFLHDVVEDTDKT 85
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
I F +A LV+GV+KL ++ ++E +A+ MF+AM+ D R +LI
Sbjct: 86 LKDIEEAFNEEIAMLVDGVTKLGKIQYKSQEAQ------QAENHRKMFIAMSKDIRVILI 139
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADR+HNM TL LP K++R A ETLEIF PLA+RLGIS K +LE++ ++LNP Q+
Sbjct: 140 KLADRVHNMRTLKYLPPEKQRRIANETLEIFAPLAHRLGISAIKWELEDVALRYLNPQQY 199
Query: 379 TELSSKLVECFDEA--MVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + + +E + + ++++ L+ NI GR K +YSI+ KM+ +
Sbjct: 200 YRIVNLMKQKREERENYIEEVMIEVQKQLEQVNIR-AEFSGRPKHIYSIYRKMMLQNKQF 258
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI+D+ +R+IV + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 DEIYDLLAVRIIVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNLYQSLHTTVIGPK 318
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLEVQIRTKEMH AE+G AAHW YKEG
Sbjct: 319 GAPLEVQIRTKEMHEIAEYGIAAHWAYKEG 348
>gi|206561355|ref|YP_002232120.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|444361973|ref|ZP_21162546.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
gi|444373868|ref|ZP_21173181.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|198037397|emb|CAR53332.1| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
[Burkholderia cenocepacia J2315]
gi|443591028|gb|ELT59960.1| RelA/SpoT family protein [Burkholderia cenocepacia K56-2Valvano]
gi|443597844|gb|ELT66253.1| RelA/SpoT family protein [Burkholderia cenocepacia BC7]
Length = 788
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 215/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 NELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YS++ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G S + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|404214823|ref|YP_006669018.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
gi|403645622|gb|AFR48862.1| GDP pyrophosphokinase / GTP pyrophosphokinase/
guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
[Gordonia sp. KTR9]
Length = 793
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/357 (42%), Positives = 210/357 (58%), Gaps = 17/357 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H GQ R SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 89 RAYDVADERHSGQKRKSGDPYITHPLAVATILADLGMDTTTLIAALLHDTVEDTGYSLQA 148
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 149 LEADFGPEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 200
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 201 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 260
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL I+ V GR K +SI+ KM+ K D+I
Sbjct: 261 VRLVADRAPSRDTYLARVRADINNALSGARINATV-EGRPKHYWSIYQKMIVKGRDFDDI 319
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ E + DCY A+ VVH LW + G+ KDYI +P+F Y SLHT V G P
Sbjct: 320 HDLVGMRILCEEDRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYMSLHTTVIGPEGKP 379
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE-----WARWVLTWQCEA 551
LEVQIRT EMH AEFG AAHWRYKE + S E W R +L WQ EA
Sbjct: 380 LEVQIRTHEMHRTAEFGIAAHWRYKENGYRKSGKKSDTAEIDDMAWMRQLLDWQREA 436
>gi|172058098|ref|YP_001814558.1| (p)ppGpp synthetase I SpoT/RelA [Exiguobacterium sibiricum 255-15]
gi|171990619|gb|ACB61541.1| (p)ppGpp synthetase I, SpoT/RelA [Exiguobacterium sibiricum 255-15]
Length = 732
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/352 (42%), Positives = 221/352 (62%), Gaps = 17/352 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E++ A++K + +A+ A+ H GQ R SG+PY++H V+ A +L IG ++T
Sbjct: 18 EYMTEAEVKD-------IERAYQFAKDEHEGQFRRSGEPYIIHPVQVAGILVDIGLDATT 70
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+ A LLHD ++D ++ + + FGA VA LV+GV+KL ++ ++ A +
Sbjct: 71 IVAALLHDVVEDTDITLEELTERFGADVAMLVDGVTKLGKIKYKSKREELA------ENH 124
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
MF+AMA D R +LIKLADRLHNM TL + K+ + A+ETLEIF PLA+RLGIST K
Sbjct: 125 RKMFIAMAEDIRVILIKLADRLHNMRTLQHMVKEKQVQKAEETLEIFAPLAHRLGISTIK 184
Query: 363 VQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+LE++ +++NP Q+ + S K EA+VTS I+++ + L++ I+ V GR K
Sbjct: 185 WELEDISLRYINPQQYYRIVSMMKQKRTEREALVTSVIDEVNEVLEEVEIAAEV-DGRPK 243
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
+YSI+ KM K EI+D+ +R+IV++ +DCY L ++H + +PG+ KDYI P
Sbjct: 244 HIYSIYNKMQNSKKEFSEIYDLMAVRIIVDSIKDCYAVLGIIHTQYKPMPGRFKDYIAMP 303
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSS 532
K N YQSLHT V G PLEVQIRT++MH AE+G AAHW YKEG Q +
Sbjct: 304 KPNMYQSLHTTVIGPKGEPLEVQIRTRDMHFIAEYGIAAHWAYKEGKEQEAK 355
>gi|407280047|ref|ZP_11108517.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus sp. P14]
Length = 743
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 211/355 (59%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 42 RAYDVAEERHASQKRKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQ 101
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 102 LTAEFGEEVAHLVDGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVA 153
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 154 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 213
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + ++ L I V GR K +SI+ KM+ K D+
Sbjct: 214 V-RLVATRAPSRDTYLAKVRAEINSTLSASRIEATV-EGRPKHYWSIYQKMIVKGRDFDD 271
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++ DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G
Sbjct: 272 IHDLVGVRILCNEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGK 331
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
PLEVQIRT+EMH AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 332 PLEVQIRTREMHRTAEFGIAAHWRYKETKGKHSGDAAELDDMAWMRQLLDWQREA 386
>gi|328957461|ref|YP_004374847.1| GTP pyrophosphokinase [Carnobacterium sp. 17-4]
gi|328673785|gb|AEB29831.1| GTP pyrophosphokinase (RelA/SpoT) [Carnobacterium sp. 17-4]
Length = 736
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 220/359 (61%), Gaps = 16/359 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH+ Q R SG+PY++H ++ A +LA + + VA G LHD ++D +
Sbjct: 27 FVKKACDFATNAHKDQFRKSGEPYIIHPIQVAGILAELKMDPVTVATGFLHDVVEDTEYT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
++ I R F VA LV+GV+KL ++ + E +A+ M LAMA D R +++
Sbjct: 87 FEDISREFSPEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMLLAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN+ TL K++R A ETLE++ PLA+RLGI+ K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNLRTLKFHRPEKQRRIANETLEVYAPLAHRLGINLIKWELEDTSLRYLNPQQY 200
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++SK E E +T +I K+E+++++ NIS + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMNSKREE--REKYITDSISKIEESVEELNISADI-TGRPKHIYSIYRKMRDQKK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
D+I+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFDQIYDLLAIRVIVDSIKDCYAVLGAIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
E P+EVQIRTKEMH AE+G AAHW YKEG + + + W R ++ Q E+
Sbjct: 318 EFGKPIEVQIRTKEMHAVAEYGVAAHWAYKEGITRKVEDDSDGKKISWFRDIIELQDES 376
>gi|302550154|ref|ZP_07302496.1| GTP pyrophosphokinase [Streptomyces viridochromogenes DSM 40736]
gi|302467772|gb|EFL30865.1| GTP pyrophosphokinase [Streptomyces viridochromogenes DSM 40736]
Length = 835
Score = 273 bits (697), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 155/369 (42%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 117 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDD 176
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 177 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 228
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 229 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 288
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 289 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 344
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 345 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 404
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 405 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWL 464
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 465 RQLLDWQKE 473
>gi|389815880|ref|ZP_10207128.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
gi|388465603|gb|EIM07919.1| GTP pyrophosphokinase [Planococcus antarcticus DSM 14505]
Length = 730
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 217/354 (61%), Gaps = 12/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ A AH GQ R SG+PY++H V+ A +LA + + VAAG LHD ++D +S +
Sbjct: 30 KAYQVAYDAHMGQFRKSGEPYIVHPVQVAGILAELQMDPATVAAGFLHDVVEDTEVSRED 89
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R F VA LV+GV+KLS++ L++E +A+ MF+AMA D R +LIKLA
Sbjct: 90 IVRDFDEEVAVLVDGVTKLSKIKYLSKEEQ------QAENHRKMFVAMAQDIRVILIKLA 143
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ TL + K++ A ETLEIF P+A+RLGI+T K +LE+ ++LNP Q+ +
Sbjct: 144 DRLHNLRTLKYQSVEKQRIKANETLEIFAPIAHRLGINTIKWELEDTALRYLNPQQYYRI 203
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ K E + + + ++ L + +I L GR K +YSI+ KM + +EI
Sbjct: 204 VNLMKKKRTEREEYLNNVMSEIRTQLDEVDIE-ADLFGRPKHIYSIYRKMAIQNKQFNEI 262
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ +R+ VE+ +DCY L ++H W +PG+ KDYI PK N YQSLHT V G P
Sbjct: 263 YDLLAVRITVESIKDCYAVLGIIHSTWKPMPGRFKDYIAMPKQNLYQSLHTTVIGPQGDP 322
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDC--QHSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT+EMH AE+G AAHW YKEG + S V + W R +L +Q ++
Sbjct: 323 LEVQIRTEEMHRIAEYGVAAHWAYKEGKTIDKPKSSVDSRLSWFREILDFQNDS 376
>gi|6647734|sp|O52177.1|RELA_MYXXA RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|2736190|gb|AAB97677.1| (p)ppGpp synthetase [Myxococcus xanthus]
Length = 757
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 215/351 (61%), Gaps = 13/351 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 39 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 98
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 99 TEEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 156 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 215
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
L +KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 216 FFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G
Sbjct: 275 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGP 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
+EVQIRT EMH AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 335 LSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 385
>gi|414160989|ref|ZP_11417252.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
gi|410876668|gb|EKS24566.1| GTP pyrophosphokinase [Staphylococcus simulans ACS-120-V-Sch1]
Length = 729
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/348 (41%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ + +H V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSKEEYEH-------VLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D ++D + F VA +VEGV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVKAMFNDEVAMIVEGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE++ ++++ Q+ + + K EA + +AI+ + + +IS + GR
Sbjct: 183 IKWELEDIALRYIDGVQYFRIVNLMKKKRSEREAYIANAIDNIRAEMDKMHISGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV++ +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRIIVDSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>gi|15613805|ref|NP_242108.1| GTP pyrophosphokinase [Bacillus halodurans C-125]
gi|10173858|dbj|BAB04961.1| GTP pyrophosphokinase (stringent response) [Bacillus halodurans
C-125]
Length = 728
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 219/353 (62%), Gaps = 11/353 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+F+ +A+ AE+AH GQ R SG+PY+LH V+ A ++ + + VAA LHD ++D +
Sbjct: 24 EFLQRAYEFAEKAHAGQYRKSGEPYILHPVQVAGIIVDLELDPNTVAAAFLHDVVEDTDV 83
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + + F VA LV+GV+KL ++ ++E +A+ M +AMA D R +L
Sbjct: 84 TVEALEKEFNEQVAMLVDGVTKLKKIKYKSKEEQ------QAENHRKMLVAMAKDIRVIL 137
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL +P K++ + ETLEIF PLA+RLGIST K +LE++ ++L+P Q
Sbjct: 138 IKLADRLHNMRTLRYMPPEKQRITSNETLEIFAPLAHRLGISTIKWELEDIALRYLDPQQ 197
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K E + I+K+ + L+D + + GR K +YSI+ KM+ +
Sbjct: 198 YYRIVNLMKKKRAEREEYIEDVIDKIRKQLQDIKVEAEI-SGRPKHIYSIYRKMVLQNKQ 256
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV+N +DCY L V+H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 257 FNEIYDLLAVRIIVKNIKDCYAGLGVIHTCWKPMPGRFKDYIAMPKANMYQSLHTTVVGP 316
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT+EMH AE+G AAHW YKEG + ++ W R +L WQ
Sbjct: 317 NGDPLEVQIRTEEMHRVAEYGVAAHWAYKEGTTLANPMEDKLT-WFREILEWQ 368
>gi|443673223|ref|ZP_21138292.1| GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate)
3-pyrophosphohydrolase [Rhodococcus sp. AW25M09]
gi|443414186|emb|CCQ16630.1| GTP pyrophosphokinase/guanosine-3',5'-bis (Diphosphate)
3-pyrophosphohydrolase [Rhodococcus sp. AW25M09]
Length = 824
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 213/354 (60%), Gaps = 14/354 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H QMR SGDPY+ H + A +LA +G ++T + A LLHDT++D S
Sbjct: 123 RAYDVADELHASQMRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLAK 182
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V+ LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 183 LTEEFGDEVSHLVDGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVA 234
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R AKETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 235 DRLHNMRTMRFLPPEKQARKAKETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYDEI 294
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ L IS V+ GR K +SI+ KM+ K D+I
Sbjct: 295 VRLVADRAPSRDTYLEKVRAEINATLSASRIS-AVVEGRPKHYWSIYQKMIVKGRDFDDI 353
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 354 HDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVIGPEGKP 413
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
LEVQIRT++MH AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 414 LEVQIRTRDMHRTAEFGIAAHWRYKETKGRHSQDNTEVDDMAWMRQLLDWQREA 467
>gi|408676832|ref|YP_006876659.1| GTP pyrophosphokinase , (p)ppGpp synthetase I, partial
[Streptomyces venezuelae ATCC 10712]
gi|328881161|emb|CCA54400.1| GTP pyrophosphokinase , (p)ppGpp synthetase I, partial
[Streptomyces venezuelae ATCC 10712]
Length = 846
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 217/369 (58%), Gaps = 31/369 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 130 VERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 189
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 190 DTLRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 241
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 242 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 301
Query: 380 ELSSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ + E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 302 EIVRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGR 357
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 358 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIG 417
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 418 PNGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRADVPKKTGKDDHLNDMAWL 477
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 478 RQLLDWQKE 486
>gi|423350055|ref|ZP_17327708.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
gi|404387964|gb|EJZ83054.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
Length = 748
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 216/358 (60%), Gaps = 16/358 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ A + H G R SGDPY+ H + A + A IG ++T + A LLHDT++D +
Sbjct: 43 LIDRAYTRAYKLHDGVYRKSGDPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYT 102
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG A LV+GV+KL +++ A EA+ + M +AMA D R ++I
Sbjct: 103 LKQLTDEFGQETARLVDGVTKLDKVALGA--------AAEAETVRKMVVAMAQDPRVLVI 154
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ LP K+++ A++TLE+ PLA+RLG+++ K +LE+L F L P ++
Sbjct: 155 KVADRLHNMRTMRFLPPEKQEKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKY 214
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + M+ +LE +LKD NIS V GR K +SI+ KM +
Sbjct: 215 DEIVRLVADRAPQRDKMIKEISSQLEASLKDNNISAEV-QGRPKHYWSIYQKMKVRGHEF 273
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI D+ G+R++V+ DCY + VVH L+ +PG+ KDYI+ P+F YQSLHT V E
Sbjct: 274 DEIFDLIGIRVLVDTVADCYAVIGVVHLLYNPMPGRFKDYISAPRFGVYQSLHTTVMTES 333
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT EMH AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 334 GRPLEVQVRTHEMHFNAEFGIAAHWRYKETKGTHKGDQAEVDQMA-WMRQLLDWQKEA 390
>gi|294811578|ref|ZP_06770221.1| Putative ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294324177|gb|EFG05820.1| Putative ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 862
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 216/367 (58%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 148 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 207
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 208 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 259
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 260 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 319
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 320 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 375
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 376 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 435
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 436 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKSGKDDHVNDMAWLRQ 495
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 496 LLDWQKE 502
>gi|452960672|gb|EME65987.1| gtp diphosphokinase/guanosine-3',5'-bis(diphosphate)
3'-diphosphatase [Rhodococcus ruber BKS 20-38]
Length = 724
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/355 (42%), Positives = 211/355 (59%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE H Q R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 23 RAYDVAEERHASQKRKSGDPYITHPLAVATILAELGMDTTTLIAALLHDTVEDTGYSLEQ 82
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG VA LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 83 LTAEFGEEVAHLVDGVTKLDKV--------VLGTAAEGETIRKMIIAMARDPRVLVIKVA 134
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 135 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKKYEEI 194
Query: 382 SSKLVECF---DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + + ++ L I V GR K +SI+ KM+ K D+
Sbjct: 195 V-RLVATRAPSRDTYLAKVRAEINSTLSASRIEATV-EGRPKHYWSIYQKMIVKGRDFDD 252
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHD+ G+R++ DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G
Sbjct: 253 IHDLVGVRILCNEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGK 312
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM--VEWARWVLTWQCEA 551
PLEVQIRT+EMH AEFG AAHWRYKE +HS ++ + W R +L WQ EA
Sbjct: 313 PLEVQIRTREMHRTAEFGIAAHWRYKETKGKHSGDATELDDMAWMRQLLDWQREA 367
>gi|332670533|ref|YP_004453541.1| (p)ppGpp synthetase I SpoT/RelA [Cellulomonas fimi ATCC 484]
gi|332339571|gb|AEE46154.1| (p)ppGpp synthetase I, SpoT/RelA [Cellulomonas fimi ATCC 484]
Length = 777
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/362 (41%), Positives = 213/362 (58%), Gaps = 26/362 (7%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AE+AHRGQ+R SGDPY+ H V A +LA +G + +AA LLHDT++D S
Sbjct: 64 VEQAYVVAEKAHRGQLRKSGDPYITHPVAVATILAELGMTPSTLAAALLHDTVEDTEYSL 123
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + R FG VA LV+GV+KL ++ T +A+ + M +AM+ D R ++IK
Sbjct: 124 DQLRREFGPEVAMLVDGVTKLDKV--------TYGDAAQAETVRKMVVAMSRDIRVLVIK 175
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN T + ++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 176 LADRLHNARTWKFVASTSAEKKARETLEIYAPLAHRLGMNTIKWELEDLSFATLYPKLYD 235
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E+ + E E + +++ L+ I V GR K YSI+ KM+ +
Sbjct: 236 EIVHLVAERAPAREEYLAVVRDQVGADLRSAKIKATV-TGRPKHYYSIYQKMIVRGRDFA 294
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 295 DIYDLVGVRVLVDTVRDCYAALGALHARWNPVPGRFKDYIAMPKFNLYQSLHTTVIGPGG 354
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKE---------GDCQHSSFVLQMVEWARWVLTWQ 548
P+E+QIRT +MH +AE+G AAHW+YKE GD + V W R ++ WQ
Sbjct: 355 KPVEIQIRTHDMHRRAEYGVAAHWKYKESAKSAPGQTGDAAGNDMV-----WLRQLVDWQ 409
Query: 549 CE 550
E
Sbjct: 410 KE 411
>gi|171315538|ref|ZP_02904774.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
gi|171099375|gb|EDT44113.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MEX-5]
Length = 788
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 213/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVIGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVESPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|373454718|ref|ZP_09546582.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
gi|371935581|gb|EHO63326.1| RelA/SpoT family protein [Dialister succinatiphilus YIT 11850]
Length = 800
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 146/349 (41%), Positives = 209/349 (59%), Gaps = 10/349 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A +AH Q+RA+G+PY++H + A +LA + + + A LLHD ++D + +
Sbjct: 98 EAYELASKAHAAQVRATGEPYIIHPLAVAYILAELEMDPQGIMAALLHDVVEDTEYTLED 157
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LV+GV+KLSQ +E+ + + MFLAMA D R V+IKLA
Sbjct: 158 IKMMFGEEVAFLVDGVTKLSQFHYKDKEDQ------QLENFRKMFLAMAKDIRVVVIKLA 211
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL K+QR AKET+EI+ PLA+RLGI K +LE+LCF +L+P+++ +L
Sbjct: 212 DRLHNMRTLGVFRREKQQRIAKETIEIYAPLAHRLGIYNIKWELEDLCFHYLHPEEYYDL 271
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E +V + L +++ I + GR K YSI+ KM + + +I
Sbjct: 272 VRQMKQKRKAREEIVNDTMRVLHDHIEEAGIK-ATITGRPKHFYSIYKKMKRDNKDLSQI 330
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+Y +R+IV+ CY L + H LW +P + KDYI PK N YQSLHT V G P
Sbjct: 331 YDLYAVRVIVDTIPQCYAVLGIAHSLWKPLPNRFKDYIAVPKPNMYQSLHTTVIGTRGQP 390
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
+E+QIRT EMH +E+G AAHWRYKEG S + W R +L WQ
Sbjct: 391 VEIQIRTWEMHHISEYGVAAHWRYKEGKQAGSKDFDAKISWLRRILEWQ 439
>gi|257866975|ref|ZP_05646628.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257873309|ref|ZP_05652962.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257877051|ref|ZP_05656704.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
gi|257801031|gb|EEV29961.1| RelA/SpoT protein [Enterococcus casseliflavus EC30]
gi|257807473|gb|EEV36295.1| RelA/SpoT protein [Enterococcus casseliflavus EC10]
gi|257811217|gb|EEV40037.1| RelA/SpoT protein [Enterococcus casseliflavus EC20]
Length = 736
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 218/357 (61%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH+ Q R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 27 FVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FGA VA LV+GV+KL ++ + E A + M +AMA D R +++
Sbjct: 87 LADLKEEFGADVAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + +E + V+ +E++ A ++ +I + + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMQTKREERESYVSETVEEIRIATEELDI-YAEIYGRPKHIYSIYRKMKDQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVIVDSIKDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 320 GNPVEIQIRTHEMHEIAEFGVAAHWAYKEGKTEKVRADKMTQQVGWFREILELQDES 376
>gi|29833382|ref|NP_828016.1| ppGpp synthetase [Streptomyces avermitilis MA-4680]
gi|29610505|dbj|BAC74551.1| putative ppGpp synthetase [Streptomyces avermitilis MA-4680]
Length = 845
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 216/368 (58%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 126 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 185
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 186 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 237
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 238 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 297
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 298 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 353
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 354 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 413
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 414 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEPSAGASKVRTDAPKSVGKDKDAVNDMAWLR 473
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 474 QLLDWQKE 481
>gi|395236997|ref|ZP_10415120.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
gi|394487806|emb|CCI83208.1| GTP pyrophosphokinase [Turicella otitidis ATCC 51513]
Length = 758
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/358 (42%), Positives = 216/358 (60%), Gaps = 16/358 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ A + H G R SGDPY+ H + A + A IG ++T + A LLHDT++D +
Sbjct: 53 LIDRAYTRAYKLHDGVYRKSGDPYITHPLAVATIAAEIGMDTTTIVAALLHDTVEDTDYT 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG A LV+GV+KL +++ A EA+ + M +AMA D R ++I
Sbjct: 113 LKQLTDEFGQETARLVDGVTKLDKVALGA--------AAEAETVRKMVVAMAQDPRVLVI 164
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
K+ADRLHNM T+ LP K+++ A++TLE+ PLA+RLG+++ K +LE+L F L P ++
Sbjct: 165 KVADRLHNMRTMRFLPPEKQEKKARQTLEVIAPLAHRLGMASIKWELEDLSFAILYPKKY 224
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + M+ +LE +LKD NIS V GR K +SI+ KM +
Sbjct: 225 DEIVRLVADRAPQRDKMIKEISSQLEASLKDNNISAEV-QGRPKHYWSIYQKMKVRGHEF 283
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
DEI D+ G+R++V+ DCY + VVH L+ +PG+ KDYI+ P+F YQSLHT V E
Sbjct: 284 DEIFDLIGIRVLVDTVADCYAVIGVVHLLYNPMPGRFKDYISAPRFGVYQSLHTTVMTES 343
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT EMH AEFG AAHWRYKE H + V QM W R +L WQ EA
Sbjct: 344 GRPLEVQVRTHEMHFNAEFGIAAHWRYKETKGTHKGDQAEVDQMA-WMRQLLDWQKEA 400
>gi|126434905|ref|YP_001070596.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. JLS]
gi|126234705|gb|ABN98105.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. JLS]
Length = 806
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/379 (40%), Positives = 219/379 (57%), Gaps = 27/379 (7%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
+EF A L + +A+ AE H QMR SGDPY+ H + A +LA +G ++T
Sbjct: 88 REFYPKADLT-------LLQRAYEVAEERHADQMRRSGDPYITHPLAVANILAELGMDTT 140
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+ A LLHDT++D + D + FGA V LV+GV+KL +++ E +
Sbjct: 141 TLIAALLHDTVEDTGYTLDALTAEFGAEVGHLVDGVTKLDKVA--------LGTAAEGET 192
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M +AMA D R ++IK+ADRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T
Sbjct: 193 IRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATV 252
Query: 362 KVQLENLCFKHLNPDQHTE---LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+L F L+P ++ E L + D + E + K K + + GR
Sbjct: 253 KWELEDLSFAILHPKKYDEIVRLVADRAPSRDTYLAKVRAEIVNTLTKSKINA--TVEGR 310
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +SI+ KM+ K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI
Sbjct: 311 PKHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIA 370
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSS 532
+P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE + H++
Sbjct: 371 QPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKESKGRNGSPAGHTA 430
Query: 533 FVLQMVEWARWVLTWQCEA 551
+ + W R +L WQ EA
Sbjct: 431 AEIDDMAWMRQLLDWQREA 449
>gi|111221581|ref|YP_712375.1| GTP pyrophosphokinase [Frankia alni ACN14a]
gi|111149113|emb|CAJ60796.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) (ppGpp
synthetase I) ((P)ppGpp synthetase) [Frankia alni
ACN14a]
Length = 737
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 151/373 (40%), Positives = 223/373 (59%), Gaps = 30/373 (8%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V +AF A+ AH GQ+R SG PY+ H + A +LA +G ++ ++A LLHDTL++ L
Sbjct: 15 DQVQQAFEVADAAHAGQVRFSGHPYITHPIAVASILADLGMDTPTLSAALLHDTLEETSL 74
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + I TFG +A +V+ VSKL+++ + +A+ + M +AMA D RA++
Sbjct: 75 SAEAIRETFGDQIALIVDAVSKLNRVK--------VGEAAQAETIRRMVVAMARDPRALV 126
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL LP K++R A+ETLE++ PLA+RLG+++ K +LE+L F L P +
Sbjct: 127 VKLADRLHNMRTLRFLPEHKQERKARETLEVYAPLAHRLGMNSLKWELEDLAFAALYPKR 186
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + + + + I +++ L+D I V+ GR K YSI+ KM+ + +
Sbjct: 187 YDEIVRLVADRAPSRDVYLAEVIGQVQAGLRDARIR-AVVSGRPKHYYSIYQKMVVRGRS 245
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I+D+ G+R++V++ DCY L VH W +PG+ KDYI PKFN YQSLHT V G
Sbjct: 246 FDDIYDLVGIRVLVDSVRDCYATLGTVHANWKPIPGRFKDYIAMPKFNMYQSLHTTVIGP 305
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE-GDCQHSSFVL-----------------QM 537
P+E+QIRT MH +AE+G AAHW+YKE G S +
Sbjct: 306 EGKPVELQIRTHAMHNRAEYGIAAHWKYKEDGVAARPSAAAVDSGGGRSGRRRGSPEPDL 365
Query: 538 VEWARWVLTWQCE 550
+ W R VL WQ E
Sbjct: 366 MSWLRQVLDWQRE 378
>gi|254391321|ref|ZP_05006525.1| GTP pyrophosphokinase [Streptomyces clavuligerus ATCC 27064]
gi|326440038|ref|ZP_08214772.1| ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|150170983|emb|CAL64065.1| ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197705012|gb|EDY50824.1| GTP pyrophosphokinase [Streptomyces clavuligerus ATCC 27064]
Length = 845
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 216/367 (58%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 131 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 190
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 191 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 242
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 243 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 302
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 303 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 358
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 359 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 418
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 419 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKSGKDDHVNDMAWLRQ 478
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 479 LLDWQKE 485
>gi|383650349|ref|ZP_09960755.1| GTP pyrophosphokinase [Streptomyces chartreusis NRRL 12338]
Length = 837
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/368 (41%), Positives = 218/368 (59%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 120 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDD 179
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 180 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 231
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 232 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 291
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 292 VRLVAERAPKRDEYLAIVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 347
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 348 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 407
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 408 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKDKDAINDMAWLR 467
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 468 QLLDWQKE 475
>gi|403070228|ref|ZP_10911560.1| GTP pyrophosphokinase [Oceanobacillus sp. Ndiop]
Length = 733
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 155/388 (39%), Positives = 230/388 (59%), Gaps = 21/388 (5%)
Query: 170 EDNIVEGNLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVE 229
E+N+ ++ A +L+N + + + A+ A AH Q R SG+PY++H V+
Sbjct: 4 EENLTITDIINKASIYLSNDDV-------ELIQHAYDFASEAHHDQFRKSGEPYIIHPVQ 56
Query: 230 TAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLAR 289
A +LA + ++ +A G LHD ++D ++ + + + F +A LV+GV+KL ++ +
Sbjct: 57 VAGILANLEMDAETIAGGFLHDVVEDTDVTLEKMEQEFNHEIAMLVDGVTKLGKIRYETK 116
Query: 290 ENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEI 348
E +A+ MF+AMA D R +LIKLADRLHNM TL L K++R + ETLEI
Sbjct: 117 EAQ------QAENHRKMFVAMAKDIRVILIKLADRLHNMRTLKHLSSEKQRRISNETLEI 170
Query: 349 FVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALK 406
F PLA+RLGIST K +LE+ ++LNP Q+ + + + +E + + I++L L
Sbjct: 171 FAPLAHRLGISTIKWELEDTALRYLNPQQYYRIVQLMKQKREERESYIKEVIDELSVDLH 230
Query: 407 DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLW 466
+ NI + GR K LYSI+ KM+ + +EI+D+ +R+IV++ +DCY L ++H W
Sbjct: 231 EVNIE-AEMSGRPKHLYSIYQKMVLQNKQFNEIYDLLAVRIIVDSIKDCYAVLGIIHTNW 289
Query: 467 AEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
+PG+ KDYI PK N YQSLHT V G PLEVQIRTKEMH AE+G AAHW YKEG
Sbjct: 290 KPMPGRFKDYIAMPKQNLYQSLHTTVIGPKGDPLEVQIRTKEMHEIAEYGIAAHWAYKEG 349
Query: 527 DC---QHSSFVLQMVEWARWVLTWQCEA 551
SF ++ W R +L WQ +
Sbjct: 350 KQVKPGKKSFEEKLT-WFREILDWQNDT 376
>gi|148658211|ref|YP_001278416.1| (p)ppGpp synthetase I SpoT/RelA [Roseiflexus sp. RS-1]
gi|148570321|gb|ABQ92466.1| (p)ppGpp synthetase I, SpoT/RelA [Roseiflexus sp. RS-1]
Length = 774
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 198 EDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
E+ V A+ A AH Q R SG+PY+ H V A +L + ++ VAA LLHD L+D
Sbjct: 71 EELVRNAYAVACEAHGKQKRDSGEPYIDHPVAVAHILIDLQLDAASVAAALLHDVLEDTL 130
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAV 316
+S + + FGA +A+LV+ V+KLS L RE + MF+AMAD R V
Sbjct: 131 VSKEQLTALFGAEIANLVDSVTKLSALEARTREE------AQVGTYRKMFIAMADDPRVV 184
Query: 317 LIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPD 376
L+KLADRLHNM T+ +L +++R A ETLEI+ PLA+RLGI K +LE+ F LNP+
Sbjct: 185 LVKLADRLHNMRTIGSLSEERQKRMALETLEIYAPLAHRLGIWQIKWELEDRAFAVLNPE 244
Query: 377 QHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
++ E+S +L D E +V I++L Q L+ + I + GR K +YSI+ KM +K +
Sbjct: 245 KYQEISRQLSLRRDARERLVHRVIQRLRQVLEKEGIKADI-TGRPKHIYSIYRKMERKGV 303
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
++D+I+D +R+IV+ DCY+ L +VH W VPG+ DYI PK + YQSLHT V
Sbjct: 304 SLDQIYDQLAVRVIVDTVADCYRVLGLVHATWPPVPGEFDDYIAMPKESMYQSLHTTVLI 363
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQ 548
G P E+QIRT EMH AE G AAHWRYKEG + + + W R ++ W+
Sbjct: 364 PGGQPCEIQIRTHEMHEVAERGIAAHWRYKEGFGRIDASFESKLAWLRGLIEWR 417
>gi|170698516|ref|ZP_02889587.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
gi|170136600|gb|EDT04857.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria IOP40-10]
Length = 788
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|172059928|ref|YP_001807580.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria MC40-6]
gi|171992445|gb|ACB63364.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria MC40-6]
Length = 788
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILESAQRAMSDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|428174361|gb|EKX43257.1| hypothetical protein GUITHDRAFT_73270 [Guillardia theta CCMP2712]
Length = 370
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 144/349 (41%), Positives = 218/349 (62%), Gaps = 15/349 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KAFY A+R H GQ+R SG+PY +H V A ++A + +S + GLLHDT++D S +
Sbjct: 4 KAFYFAQRMHEGQLRRSGEPYFIHPVGVASIIADMKLDSASIVTGLLHDTVEDTSASLEL 63
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I + FG+ VA LV+GV+K+ ++ ++E +A+ M +AMA D R +L+KLA
Sbjct: 64 IQQEFGSEVAQLVDGVTKIGKIQFTSKEEQ------QAENFRKMIVAMARDIRVILVKLA 117
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HN+ TL +P K++ A+ETL+++ PLA+RLGI K +LE+ ++L P+ + EL
Sbjct: 118 DRTHNVRTLKFVPAQKQKEVARETLDLYAPLAHRLGIFWMKTELEDTSLRYLEPEVYEEL 177
Query: 382 SSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT-MDE 438
+ +E A +E LE++L D+ ++ +V+ GR K YSI+ KM ++L + E
Sbjct: 178 KMMVAAKKEERQAYTNEVMEILEKSLVDQGLTNVVVTGRAKHFYSIYQKMRSRRLKHVSE 237
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
+ D+ R++ ++ CYQAL +VH +W VPG+ KDYI PK N Y+SLHT V G G
Sbjct: 238 VQDLIAFRILTDDLSQCYQALGIVHSMWKPVPGRFKDYIALPKPNMYRSLHTTVIGPGGQ 297
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYK---EG--DCQHSSFVLQMVEWAR 542
+EVQIRT EMH AE G AAHW YK +G + + +++ Q+VEW +
Sbjct: 298 RIEVQIRTSEMHRVAEEGIAAHWMYKGESKGVEEARRFAWLRQLVEWVQ 346
>gi|451981332|ref|ZP_21929693.1| GTP pyrophosphokinase [Nitrospina gracilis 3/211]
gi|451761445|emb|CCQ90949.1| GTP pyrophosphokinase [Nitrospina gracilis 3/211]
Length = 737
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/365 (41%), Positives = 221/365 (60%), Gaps = 16/365 (4%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E Q H D ++ A+ + +AHRGQ R SG+ YL H VE A L + +
Sbjct: 6 EITEAVQAYHSTANVDIILDAYIYSAKAHRGQSRRSGEAYLSHPVEVAYNLTRLKMDERT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
VAAGLLHDT++D + D I FG + LV+GV+K+ ++ + E +A+
Sbjct: 66 VAAGLLHDTIEDTLATADEIRELFGDEIYGLVDGVTKIGEIEFSSHEEK------QAENY 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
M LAMA D R V+IKLADR HN+ TL +L +++R A+ETL+I+ LANRLGI K
Sbjct: 120 RKMILAMARDIRVVMIKLADRAHNLRTLGSLDPSRQKRIARETLDIYAALANRLGIGWLK 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+LE+ FK+L+P+Q+ + +++ + +E +V + LE+ LK ++ V+ GR K
Sbjct: 180 AELEDGSFKYLHPEQYQAIVNRMHKGQEERDQLVKNVYTLLEKELKSADLDG-VITGRSK 238
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
YSI+ KM+ +++ +++++D+ G+R+I + +DCY L +VH LW +PGK KDYI P
Sbjct: 239 HYYSIYRKMVTQQIDLEDVYDLIGVRVITHSVKDCYAVLGLVHSLWRPIPGKFKDYIAMP 298
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDC------QHSSFV 534
K N YQSLHT V G +EVQIRTKEMH AE G AAHW+YK+G H S+V
Sbjct: 299 KPNMYQSLHTTVNGPNGQRVEVQIRTKEMHRVAEEGIAAHWQYKDGGGLAKNLDDHLSWV 358
Query: 535 LQMVE 539
+++E
Sbjct: 359 RRLLE 363
>gi|115350915|ref|YP_772754.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia ambifaria AMMD]
gi|115280903|gb|ABI86420.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia ambifaria AMMD]
Length = 788
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILESAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|325568309|ref|ZP_08144676.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|420264623|ref|ZP_14767252.1| GTP diphosphokinase [Enterococcus sp. C1]
gi|325158078|gb|EGC70231.1| GTP diphosphokinase [Enterococcus casseliflavus ATCC 12755]
gi|394767937|gb|EJF48167.1| GTP diphosphokinase [Enterococcus sp. C1]
Length = 736
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 148/357 (41%), Positives = 218/357 (61%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH+ Q R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 27 FVQKALDYATEAHKEQFRKSGEPYIIHPIQVAGILAELQMDPHTVATGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FGA VA LV+GV+KL ++ + E A + M +AMA D R +++
Sbjct: 87 LADLKEEFGADVAMLVDGVTKLGKIKYKSHEEQLA------ENHRKMLIAMAQDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R A+ET+EI+ PLA+RLGIS K +LE++ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLREDKQRRIAQETMEIYAPLAHRLGISRIKWELEDISLRYLNPQQY 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + +E + V+ +E++ A ++ +I + + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMQTKREERESYVSETVEEIRIATEELDI-YAEIYGRPKHIYSIYRKMKDQKKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R+IV++ +DCY L +H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAIRVIVDSIKDCYAVLGTIHTKWKPMPGRFKDYIAMPKANMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ--HSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT EMH AEFG AAHW YKEG + + + Q V W R +L Q E+
Sbjct: 320 GNPVEIQIRTHEMHEIAEFGVAAHWAYKEGKTEKVRADKMTQQVGWFREILELQDES 376
>gi|326780479|ref|ZP_08239744.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces griseus XylebKG-1]
gi|326660812|gb|EGE45658.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces griseus XylebKG-1]
Length = 874
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 216/368 (58%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 158 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 217
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 218 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 269
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 270 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 329
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 330 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 385
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 386 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPS 445
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 446 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKNTGRGQDTVNDMAWLR 505
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 506 QLLDWQKE 513
>gi|317131341|ref|YP_004090655.1| (p)ppGpp synthetase I SpoT/RelA [Ethanoligenens harbinense YUAN-3]
gi|315469320|gb|ADU25924.1| (p)ppGpp synthetase I, SpoT/RelA [Ethanoligenens harbinense YUAN-3]
Length = 729
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/356 (42%), Positives = 222/356 (62%), Gaps = 13/356 (3%)
Query: 202 IKAFYE-AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
I A YE A RAH GQ R SGDPY++H V A +L +G ++ + A LLHD ++D +
Sbjct: 24 ITAAYELAHRAHDGQFRKSGDPYIIHPVAVATILVNLGLDTDSLCAALLHDVVEDTGVPL 83
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ I + FG+ VA LV+GV+K+ +++ +RE +A+ + M LAMA D R +LIK
Sbjct: 84 ENIRKQFGSDVALLVDGVTKVGRVAHYSREEQ------QAESIRKMLLAMAKDIRVILIK 137
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TLDA+ K+ + T+E++ P+A+RLGI T K +LE+L +HL+P +
Sbjct: 138 LADRLHNMRTLDAMTSQKQLDISLGTMEVYAPIAHRLGIRTVKDELEDLSIRHLDPVAYH 197
Query: 380 ELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E+ L + DE A++ S ++ + L+ +++ + GR KS+Y I+ K+ K +
Sbjct: 198 EIEVALKKRKDEREAILQSIQNRIAERLQSLHMNVHI-EGRVKSIYGIYRKVYMKGRAFE 256
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+I+DIY +R+IV+ +CY L V+H L VPG+ KDYI+ PK N YQSLHT V G+
Sbjct: 257 QIYDIYAVRVIVDTVNECYNILGVIHDLMKPVPGRFKDYISTPKPNMYQSLHTTVIGKEG 316
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 551
VP+EVQIRT +MH AE+G AAHW+YK G + + +EW R +L Q +
Sbjct: 317 VPIEVQIRTWDMHHTAEYGIAAHWKYKLGIQSSKDKGSLESRLEWVRQLLEVQTDV 372
>gi|16303981|gb|AAL16895.1|AF421216_2 ppGpp synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 843
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 152/367 (41%), Positives = 216/367 (58%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 188
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 356
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 416
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 417 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKSGKDDHVNDMAWLRQ 476
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 477 LLDWQKE 483
>gi|108799247|ref|YP_639444.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. MCS]
gi|119868363|ref|YP_938315.1| (p)ppGpp synthetase I SpoT/RelA [Mycobacterium sp. KMS]
gi|108769666|gb|ABG08388.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. MCS]
gi|119694452|gb|ABL91525.1| (p)ppGpp synthetase I, SpoT/RelA [Mycobacterium sp. KMS]
Length = 801
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/378 (39%), Positives = 220/378 (58%), Gaps = 25/378 (6%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
+EF A L + +A+ AE H QMR SGDPY+ H + A +LA +G ++T
Sbjct: 83 REFYPKADLT-------LLQRAYEVAEERHADQMRRSGDPYITHPLAVANILAELGMDTT 135
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+ A LLHDT++D + D + FGA V LV+GV+KL +++ E +
Sbjct: 136 TLIAALLHDTVEDTGYTLDALTAEFGAEVGHLVDGVTKLDKVA--------LGTAAEGET 187
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M +AMA D R ++IK+ADRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T
Sbjct: 188 IRKMIIAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATV 247
Query: 362 KVQLENLCFKHLNPDQHTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRH 419
K +LE+L F L+P ++ E+ + + + + ++ L I+ V GR
Sbjct: 248 KWELEDLSFAILHPKKYDEIVRLVADRAPSRDTYLAKVRAEIVNTLTKSKINATV-EGRP 306
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +SI+ KM+ K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +
Sbjct: 307 KHYWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQ 366
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSF 533
P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE + H++
Sbjct: 367 PRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKESKGRNGSPAGHTAA 426
Query: 534 VLQMVEWARWVLTWQCEA 551
+ + W R +L WQ EA
Sbjct: 427 EIDDMAWMRQLLDWQREA 444
>gi|455643845|gb|EMF22967.1| GTP pyrophosphokinase [Streptomyces gancidicus BKS 13-15]
Length = 840
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 219/368 (59%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 124 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 183
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 184 LRRDFGDVVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 235
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 236 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 295
Query: 382 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 296 VRLVAERAPKRDEYLAVVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 351
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 352 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 411
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S + + + W R
Sbjct: 412 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKIRTDAPRSSGKDKDAINDMAWLR 471
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 472 QLLDWQKE 479
>gi|260578820|ref|ZP_05846727.1| GTP diphosphokinase [Corynebacterium jeikeium ATCC 43734]
gi|258603118|gb|EEW16388.1| GTP diphosphokinase [Corynebacterium jeikeium ATCC 43734]
Length = 755
Score = 272 bits (695), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 223/368 (60%), Gaps = 18/368 (4%)
Query: 193 HKIF--REDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 248
H+ F R D + +A+ AE+ H G R SG+PY+ H + A + A IG ++T V A L
Sbjct: 37 HRRFHPRADLALLNRAYATAEKLHEGVKRKSGEPYITHPLAVATIAAEIGMDTTTVVAAL 96
Query: 249 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFL 308
LHDT++D S + + R FG+ VA LV+GV+KL ++ EA+ + M +
Sbjct: 97 LHDTVEDTDYSLEDLSRDFGSEVARLVDGVTKLDKV--------VLGSAAEAETIRKMIV 148
Query: 309 AMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLEN 367
AMA D R ++IK++DRLHNM T+ LP K+ + A+ETLE+ PLA+RLG++T K +LE+
Sbjct: 149 AMAEDPRVLVIKVSDRLHNMRTMRFLPPEKQAKKARETLEVIAPLAHRLGMATVKWELED 208
Query: 368 LCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 425
L F L P ++ E+ + + + + +++E A+ ++ V GR K +SI
Sbjct: 209 LAFAILYPKKYDEIVRLVADRAPKRDQYLAKVKQEIELAMSRSSLHATV-EGRPKHYWSI 267
Query: 426 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 485
+ KM+ + DEI D+ G+R++V++ +DCY A+ +H L+ +PG+ KDYI+ P+F Y
Sbjct: 268 YQKMIVRGRDFDEIFDLVGVRILVDSVQDCYAAVGAIHTLYQPMPGRFKDYISSPRFGVY 327
Query: 486 QSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARW 543
QSLHT V G PLEVQIRT EMH AE+G AAHWRYKE G+ S + + W R
Sbjct: 328 QSLHTTVIGPDTKPLEVQIRTHEMHHNAEYGIAAHWRYKETRGNNNSESAEVDQMAWMRQ 387
Query: 544 VLTWQCEA 551
+L WQ EA
Sbjct: 388 LLDWQKEA 395
>gi|223044113|ref|ZP_03614152.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|417907908|ref|ZP_12551675.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
gi|222442507|gb|EEE48613.1| RelA/SpoT family protein [Staphylococcus capitis SK14]
gi|341594995|gb|EGS37673.1| GTP diphosphokinase [Staphylococcus capitis VCU116]
Length = 729
Score = 272 bits (695), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 211/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 26 EYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 85
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 86 TFEDVKDMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 139
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 140 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 199
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI K+E ++ N+S + GR K +YSI+ KM+K+K
Sbjct: 200 YFRIVNLMKKKRSEREAYIDNAINKIEAEMEKMNLSGEI-NGRPKHIYSIYRKMMKQKKQ 258
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 259 FDQIFDLLAIRIIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGP 318
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 319 NGDPLEIQIRTYEMHEIAEHGVAAHWAYKEG 349
>gi|374985148|ref|YP_004960643.1| ppGpp synthetase [Streptomyces bingchenggensis BCW-1]
gi|297155800|gb|ADI05512.1| ppGpp synthetase [Streptomyces bingchenggensis BCW-1]
Length = 832
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 216/367 (58%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 118 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 177
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 178 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 229
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 230 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 289
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 290 VRLVAERAPKRDEYLAVVTDQVQGDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 345
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 346 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPS 405
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 406 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKRAGKDDAINDMAWLRQ 465
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 466 LLDWQKE 472
>gi|163840737|ref|YP_001625142.1| GTP pyrophosphokinase [Renibacterium salmoninarum ATCC 33209]
gi|162954213|gb|ABY23728.1| GTP pyrophosphokinase [Renibacterium salmoninarum ATCC 33209]
Length = 791
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 157/375 (41%), Positives = 221/375 (58%), Gaps = 28/375 (7%)
Query: 197 REDF--VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLD 254
REDF + +A+ AER+H GQ R SGDPY+ H V A +LA +G T +AA LLHDT++
Sbjct: 77 REDFELIQRAYATAERSHEGQKRKSGDPYITHPVAVATILAELGMAGTTLAAALLHDTVE 136
Query: 255 DAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DA 313
D + + + + FG VA LV+GV+KL ++ T +++ + M +AMA D
Sbjct: 137 DTSYTLEALTKDFGPEVAMLVDGVTKLDKV--------TFGDAAQSETVRKMVVAMAKDI 188
Query: 314 RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHL 373
R ++IKLADRLHN T + R A+ETLEIF PLA+RLG++T K +LE+L F L
Sbjct: 189 RVLVIKLADRLHNARTWRYVSPESSARKARETLEIFAPLAHRLGMNTIKWELEDLSFAAL 248
Query: 374 NPDQHTELSSKLVECFDE-----AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCK 428
P + E+ + + E A+V S I +A K K + GR K YSI+ K
Sbjct: 249 YPKVYEEIVRMVEDRTPEREKSLAVVRSQINDDLRAAKIK----AAITGRPKHYYSIYQK 304
Query: 429 MLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSL 488
M+ + D+I+D+ G+R++V+ DCY AL +H W+ +PG+ KDYI PKFN YQSL
Sbjct: 305 MIVRDKDFDDINDLIGVRVLVDTVRDCYAALGSMHARWSPLPGRFKDYIAMPKFNMYQSL 364
Query: 489 HTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE------WAR 542
HT V G G P+E+QIRT EMH +AE+G AAHW+YK + + +V W R
Sbjct: 365 HTTVIGPGGKPVEIQIRTHEMHQRAEYGVAAHWKYKNQAGKSAVGASPVVNKDSDLGWLR 424
Query: 543 WVLTWQCEAMSKDRS 557
++ WQ E +KD S
Sbjct: 425 TLVDWQQE--TKDPS 437
>gi|14325225|dbj|BAB60670.1| Rel [Listeria monocytogenes]
Length = 738
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 219/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A + + Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSRKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ FG+ VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEVFGSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|411001452|ref|ZP_11377781.1| ppGpp synthetase [Streptomyces globisporus C-1027]
Length = 873
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 216/368 (58%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 157 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 216
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 217 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 268
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 269 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 328
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 329 VRLVAERAPKRDEYLAIVTDEVQSDLRAARIKA----TVTGRPKHYYSVYQKMIVRGRDF 384
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 385 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPS 444
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 445 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKNTGRGQDTVNDMAWLR 504
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 505 QLLDWQKE 512
>gi|118471771|ref|YP_887284.1| GTP pyrophosphokinase [Mycobacterium smegmatis str. MC2 155]
gi|399987301|ref|YP_006567650.1| GTP pyrophosphokinase RelA [Mycobacterium smegmatis str. MC2 155]
gi|441208103|ref|ZP_20973829.1| GTP pyrophosphokinase [Mycobacterium smegmatis MKD8]
gi|118173058|gb|ABK73954.1| GTP pyrophosphokinase [Mycobacterium smegmatis str. MC2 155]
gi|399231862|gb|AFP39355.1| GTP pyrophosphokinase RelA [Mycobacterium smegmatis str. MC2 155]
gi|440627577|gb|ELQ89385.1| GTP pyrophosphokinase [Mycobacterium smegmatis MKD8]
Length = 797
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 146/358 (40%), Positives = 216/358 (60%), Gaps = 18/358 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AE+ H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 92 RAYEVAEKRHADQLRKSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYSLEA 151
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG+ V LV+GV+KL ++ E + + M +AMA D R ++IK+A
Sbjct: 152 LTADFGSEVGHLVDGVTKLDKV--------VLGSAAEGETIRKMIIAMARDPRVLVIKVA 203
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 204 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLAFAILHPKKYEEI 263
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + ++ AL I+ V+ GR K +SI+ KM+ K D+I
Sbjct: 264 VRLVADRAPSRDTYLAKVRAEIGVALSAMKIN-AVVEGRPKHYWSIYQKMIVKGRDFDDI 322
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT V G P
Sbjct: 323 HDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHTTVVGPEGKP 382
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT+EMH AE+G AAHWRYKE + H++ + + W R +L WQ EA
Sbjct: 383 LEVQIRTREMHRTAEYGIAAHWRYKEAKGRNGVPHSHAAAEIDDMAWMRQLLDWQREA 440
>gi|345010658|ref|YP_004813012.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces violaceusniger Tu
4113]
gi|344037007|gb|AEM82732.1| (p)ppGpp synthetase I, SpoT/RelA [Streptomyces violaceusniger Tu
4113]
Length = 843
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 216/367 (58%), Gaps = 31/367 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 130 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 189
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 190 LRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMARDPRVLVIKLA 241
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 242 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 301
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 302 VRLVAERAPKRDEYLAVVTDQVQGDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 357
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 358 AEIYDLVGIRVLVDTVRDCYAALGTIHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPS 417
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARW 543
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 418 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPRKAGKDDAINDMAWLRQ 477
Query: 544 VLTWQCE 550
+L WQ E
Sbjct: 478 LLDWQKE 484
>gi|182439815|ref|YP_001827534.1| ppGpp synthetase [Streptomyces griseus subsp. griseus NBRC 13350]
gi|178468331|dbj|BAG22851.1| putative ppGpp synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 858
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/368 (41%), Positives = 216/368 (58%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D
Sbjct: 142 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDT 201
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 202 LKRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 253
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 254 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 313
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 314 VRLVAERAPKRDEYLAIVTDEVQADLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDF 369
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 370 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPS 429
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W R
Sbjct: 430 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKNTGRGQDTVNDMAWLR 489
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 490 QLLDWQKE 497
>gi|78065581|ref|YP_368350.1| (p)ppGpp synthetase I SpoT/RelA [Burkholderia sp. 383]
gi|77966326|gb|ABB07706.1| (p)ppGpp synthetase I, SpoT/RelA [Burkholderia sp. 383]
Length = 788
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +++ +E ++A+ D I + GR K++YS++ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVISKILEAAQRAMADAKIDAEI-TGREKTIYSVYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G S + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGGAAHWLYKNGSADLSDVQKRAHQWLKSLLDIQSEA 420
>gi|256832595|ref|YP_003161322.1| (p)ppGpp synthetase I SpoT/RelA [Jonesia denitrificans DSM 20603]
gi|256686126|gb|ACV09019.1| (p)ppGpp synthetase I, SpoT/RelA [Jonesia denitrificans DSM 20603]
Length = 804
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/354 (41%), Positives = 209/354 (59%), Gaps = 12/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +A+ AE+AHRGQMR SGDPY+ H V A +LA +G ++ +AA LLHDT++D S
Sbjct: 104 IIERAYATAEKAHRGQMRKSGDPYITHPVAVATILAELGMTASTLAAALLHDTVEDTPYS 163
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ +G +A LV+GV+KL ++ +++ + M +AMA D R ++I
Sbjct: 164 LAQLTSEYGEEIALLVDGVTKLDKVQY--------GDAAQSETVRKMVVAMAKDIRVLMI 215
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN T +P + A+ETLEI+ PLA+RLG++T K +LE+L F+ L P +
Sbjct: 216 KLADRLHNARTWKFVPSQSAAKKARETLEIYAPLAHRLGMNTIKWELEDLSFQTLYPKVY 275
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + E E + E + L+ I V GR K YSI+ KM+ +
Sbjct: 276 EEIVHLVAERAPAREEYLNVVREHINHDLRAARIKATV-TGRPKHYYSIYQKMIVRGHDF 334
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ G R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 335 QDIYDLVGTRVLVDTVRDCYAALGALHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 394
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P+E+QIRT +MH +AE+G AAHW+YKEG + + W R ++ WQ E
Sbjct: 395 GKPVEIQIRTHDMHRRAEYGVAAHWKYKEGAKAPAGGGSSDMAWLRQLVDWQRE 448
>gi|441162933|ref|ZP_20968190.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440616458|gb|ELQ79597.1| (p)ppGpp synthetase I SpoT/RelA [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 838
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 153/370 (41%), Positives = 217/370 (58%), Gaps = 32/370 (8%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V +A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D
Sbjct: 122 VERAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGL 181
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
D + R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IK
Sbjct: 182 DTLRRDFGDQVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIK 233
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P +
Sbjct: 234 LADRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYD 293
Query: 380 ELSSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
E+ + E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 294 EIVRLVAERAPKRDEYLAIVTDEVQADLRAARIKA----TVTGRPKHYYSVYQKMIVRGR 349
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 350 DFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIG 409
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEW 540
P+E+QIRT +MH +AE+G AAHW+YK+ +S V + + W
Sbjct: 410 PSGKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDVPKNKADGQDTVNDMAW 469
Query: 541 ARWVLTWQCE 550
R +L WQ E
Sbjct: 470 LRQLLDWQKE 479
>gi|326329825|ref|ZP_08196145.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
gi|325952411|gb|EGD44431.1| GTP diphosphokinase [Nocardioidaceae bacterium Broad-1]
Length = 771
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 211/355 (59%), Gaps = 17/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H QMR SGDPY+ H + +LA +G + A LLHDT++D +
Sbjct: 69 RAYVTAERLHGTQMRKSGDPYITHPLAVTTILAELGMTEPTLVAALLHDTVEDTPYTLKE 128
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL ++ T + +A+ + M +AM+ D R ++IKLA
Sbjct: 129 LTRDFGEEVAHLVDGVTKLDKV--------TYGDSAQAETIRKMVVAMSRDIRVLVIKLA 180
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TL +P ++R A+ETL+I+ PLA+RLG++T K +LE+L F L P + EL
Sbjct: 181 DRLHNMRTLRYVPQKSQERSARETLDIYAPLAHRLGMNTIKFELEDLAFATLYPKMYDEL 240
Query: 382 SSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+LV + E + I+++E+ L D I V GR K YSI+ KM+ +
Sbjct: 241 V-RLVADRNPSREKFLAQVIDQVERDLHDARIKATV-TGRPKHYYSIYQKMIVGGKDFSD 298
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D+ G+R++VE+E DCY L ++H W V G+ KDYI PKFN YQSLHT V G
Sbjct: 299 INDLVGIRILVEDERDCYSVLGILHSRWNPVLGRFKDYIAMPKFNMYQSLHTTVIGPQGK 358
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQM---VEWARWVLTWQCE 550
P+E+QIRT MH +AEFG AAHW+YKE M + W + ++ WQ E
Sbjct: 359 PVELQIRTFAMHRRAEFGVAAHWKYKEDGRNGVDTDRPMDNDMSWVKQLMDWQSE 413
>gi|398348042|ref|ZP_10532745.1| guanosine polyphosphate pyrophosphohydrolase/synthetase [Leptospira
broomii str. 5399]
Length = 674
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 168/466 (36%), Positives = 252/466 (54%), Gaps = 46/466 (9%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V KA+ +E AH+GQ R SG+PY++H ++ +L +G + V++AG+LHD ++D
Sbjct: 27 ELVEKAYKISEDAHQGQFRLSGEPYIVHPLQVGYILYELGLDEKVISAGILHDVIEDTKY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVL 317
+ + + FG + LVEGV+K+S++ +RE T A+ + + +A + D R +L
Sbjct: 87 TRENMVSDFGTEITQLVEGVTKISEIKSQSRE------TEAAENIRKIIIATIQDIRVIL 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLAD+ HNM TL P K++R A ETL ++ P+A RLGI K +LE+L F+ + P++
Sbjct: 141 IKLADKTHNMRTLSFQPPEKQRRIANETLSLYAPIAGRLGIYKVKSELEDLAFQVIYPEE 200
Query: 378 HTELSSKLVECFDEAMVTSAIEKLEQALKDK----NISFLVLCGRHKSLYSIHCKMLKKK 433
+ ++ ++ ++ I+KL+ LK + NI+ V GR K +SI+ KM K+
Sbjct: 201 YQDIKKRI--NVKKSEREEYIDKLQIILKQRLAEININAQV-DGRAKHFFSIYRKMKTKE 257
Query: 434 LTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVT 493
T DEI D+ +R+I + +DCY L +VH LW VPG+ KDYI PK N YQSLHT V
Sbjct: 258 KTFDEIFDLRAIRIITDEIKDCYGVLGIVHTLWTPVPGRFKDYIATPKTNMYQSLHTTVI 317
Query: 494 GEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
G PLEVQIRT EM+ AEFG AAHW YKEG H++ V+W + +WQ
Sbjct: 318 GPDGKPLEVQIRTAEMNAIAEFGIAAHWVYKEGKT-HANERHLTVKWLEVLQSWQ----- 371
Query: 554 KDRSCVGNGDSIKPPCTFPSHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPTSSTV 613
DS P F ++ + H+ VFV K + + P +TV
Sbjct: 372 ---------DSALDPKEF---LEELKYDL-----HEDEVFVF---TPKGEIIQLPKGATV 411
Query: 614 MDLLERAGRG------SSRWSPYGFPLKEELRPRLNHKAVGDPRCK 653
+D R ++ + PL+ ELR + V D R K
Sbjct: 412 LDFAFRIHTDVGLHCKGAKINNRMIPLRTELRSGDQVEVVVDKRSK 457
>gi|314933798|ref|ZP_07841163.1| GTP diphosphokinase [Staphylococcus caprae C87]
gi|313653948|gb|EFS17705.1| GTP diphosphokinase [Staphylococcus caprae C87]
Length = 734
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 146/363 (40%), Positives = 221/363 (60%), Gaps = 15/363 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 31 EYVLKSYHIAYEAHQGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 90
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 91 TFEDVKDMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 144
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 145 VKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINTIKWELEDTALRYIDSVQ 204
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI K+E ++ N+S + GR K +YSI+ KM+K+K
Sbjct: 205 YFRIVNLMKKKRSEREAYIDNAINKIEAEMEKMNLSGEI-NGRPKHIYSIYRKMMKQKKQ 263
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 264 FDQIFDLLAIRIIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNMYQSLHTTVVGP 323
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
PLE+QIRT EMH AE G AAHW YKEG V + + + L W E D
Sbjct: 324 NGDPLEIQIRTYEMHEIAEHGVAAHWAYKEGKT-----VNEKTQDFQNKLNWLKELAETD 378
Query: 556 RSC 558
R+
Sbjct: 379 RTS 381
>gi|116872952|ref|YP_849733.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116741830|emb|CAK20954.1| GTP pyrophosphokinase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 738
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 219/357 (61%), Gaps = 13/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA+ A +H+ Q R SG+PY++H ++ A +L + + + VA+G LHD ++D ++
Sbjct: 27 LVKKAYEFARDSHKEQFRKSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ F + VA LV+GV+KL ++ + E +A+ MF+AMA D R +LI
Sbjct: 87 LADLEEAFDSEVAMLVDGVTKLGKIKYKSHEEQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP+ K++R A ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPVEKQRRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQY 200
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + + D E + I+ + + L + NI + GR K +YSI+ KM ++
Sbjct: 201 YRIVHLMKQKRDARERYLHDVIDGVNENLDELNIQADI-SGRPKHIYSIYRKMSEQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 260 NEIYDLLAVRIVVSSIKDCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQ 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS--SFVLQMVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG +S SF ++ W R +L +Q E+
Sbjct: 320 GEPLEVQIRTHEMHQIAEYGVAAHWAYKEGKVVNSKTSFDNKLT-WFREILEYQNES 375
>gi|220912781|ref|YP_002488090.1| (p)ppGpp synthetase I SpoT/RelA [Arthrobacter chlorophenolicus A6]
gi|219859659|gb|ACL40001.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrobacter chlorophenolicus A6]
Length = 763
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 218/359 (60%), Gaps = 16/359 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +AF AER+HRGQ R SGDPY+ H V A +LA +G + T +AA LLHDT++D
Sbjct: 55 DLIQRAFDVAERSHRGQKRKSGDPYITHPVAVATILAELGLSGTTLAAALLHDTVEDTPY 114
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + R FGA VA LV+GV+KL ++S + +++ + M +AMA D R ++
Sbjct: 115 TLADLKRDFGAEVAMLVDGVTKLDKVS--------FGEAAQSETVRKMVVAMAKDIRVLM 166
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHN T + R A+ETLEIF PLA+RLG++T K +LE+L F L P
Sbjct: 167 IKLADRLHNARTWRFVSAESSARKARETLEIFAPLAHRLGMNTIKWELEDLSFAALYPKV 226
Query: 378 HTELSSKLVECFDEAMVTSAI--EKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + + E + + +++ + L+ I + GR K YSI+ KM+ +
Sbjct: 227 YEEIVRMVGDRTPEREKSLGVIRDQITEDLRTAKIK-ATITGRPKHYYSIYQKMIVRDKD 285
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I+D+ G+R++V++ DCY AL +H W +PG+ KDYI PKFN YQSLHT V G
Sbjct: 286 FDDINDLMGVRVLVDSVRDCYAALGTMHSRWNPLPGRFKDYIAMPKFNMYQSLHTTVIGP 345
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS----SFVLQMVEWARWVLTWQCE 550
G P+E+QIRT EMH +AE+G AAHW+YK+ + + S + W R ++ WQ E
Sbjct: 346 GGKPVEIQIRTHEMHRRAEYGVAAHWKYKDQPNRTAVGPGSPRDGDMGWLRSLVDWQQE 404
>gi|338534399|ref|YP_004667733.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
gi|337260495|gb|AEI66655.1| GTP pyrophosphokinase [Myxococcus fulvus HW-1]
Length = 740
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 214/351 (60%), Gaps = 13/351 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 21 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 81 TAEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 137
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 138 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 197
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
L KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 198 FFALQEKLNKRKKEREKYIEDTCDVIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 256
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G
Sbjct: 257 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGP 316
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
+EVQIRT EMH AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 317 LSERVEVQIRTAEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 367
>gi|332686842|ref|YP_004456616.1| GTP pyrophosphokinase [Melissococcus plutonius ATCC 35311]
gi|332370851|dbj|BAK21807.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Melissococcus
plutonius ATCC 35311]
Length = 739
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 221/359 (61%), Gaps = 16/359 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA A +AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 27 LVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHDVVEDTEIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG +A LV+GV+KL ++ + E A + M LAMA D R +L+
Sbjct: 87 LDDLKDEFGESIAVLVDGVTKLGKIKYKSHEEQLA------ENHRKMLLAMAQDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R AKETLEI+ PLA+RLGIS K +LE+ +++NP+Q+
Sbjct: 141 KLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDTALRYINPNQY 200
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK +E E+ + A++++ + IS + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMQSKRIE--RESYIAQAVDEICYVTNELGISAEI-YGRPKHIYSIYRKMKDQKK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+I+++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFNEIYDLLAIRVIIDSIKDCYAVLGAIHTKWMPMPGRFKDYIAMPKTNMYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT+EMH AEFG AAHW YKEG D S+ + + ++W R ++ Q E+
Sbjct: 318 PMGNPIEIQIRTREMHKIAEFGVAAHWAYKEGKADRLKSNDLSKQLDWFREIVELQDES 376
>gi|108762300|ref|YP_631405.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
gi|108466180|gb|ABF91365.1| GTP pyrophosphokinase [Myxococcus xanthus DK 1622]
Length = 753
Score = 271 bits (694), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 215/351 (61%), Gaps = 13/351 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 35 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 94
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 95 TEEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 151
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 152 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 211
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
L +KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 212 FFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 270
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G
Sbjct: 271 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGP 330
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
+EVQIRT EMH AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 331 LSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 381
>gi|407693232|ref|YP_006818021.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Actinobacillus suis H91-0380]
gi|407389289|gb|AFU19782.1| guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase
[Actinobacillus suis H91-0380]
Length = 568
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 171/463 (36%), Positives = 249/463 (53%), Gaps = 24/463 (5%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ V +AF A AH GQ R+SG+PY+ H V A ++A + + V A LLHD ++D
Sbjct: 21 ELVKRAFVIARDAHEGQTRSSGEPYITHPVAVASIIAEMKLDHEAVMAALLHDVIEDTPY 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FGA VA++V+GVSKL +L R+ + + M LAM D R VL
Sbjct: 81 TEEQLAAEFGASVAEIVQGVSKLDKLKFRTRQE------AQVENFRKMILAMTKDIRVVL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADR HNM TL AL KR+R AKETLEI+ PLA+RLGI K +LE+LCF+ ++P +
Sbjct: 135 IKLADRTHNMRTLGALRPDKRRRIAKETLEIYSPLAHRLGIEHLKNELEDLCFQAMHPHR 194
Query: 378 HT--ELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ ++ + + ++++ +++ L + I V GR K LYS++ KM ++
Sbjct: 195 YRVLRMAIDMARGTRQDLISTISHEIQSRLDEAGIKGRV-YGREKHLYSLYEKMRQRDQH 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
I DIY R++VEN ++CY+ L +H L+ P K++DYI PK NGYQSLHT + G
Sbjct: 254 FHSILDIYAFRVVVENVDNCYRVLGQMHSLYKPRPYKIRDYIAVPKSNGYQSLHTSMIGH 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
VP+EVQIRT++M L AE G AAHWRY E +S + +W R ++ Q A + D
Sbjct: 314 KGVPIEVQIRTEDMDLMAELGVAAHWRYTEDQTTATSVQQKAQQWLRSIIELQQSAGNSD 373
Query: 556 ------RSCVGNGD-SIKPP----CTFPSHADDCPFSYKPQCS-HDGPVFVIMIENDKMS 603
+S + + D + P P+ A F+Y D V I+ N
Sbjct: 374 EFIENVKSDLFSDDIYVFTPKGRIVELPAKATAIDFAYAVHSDIGDRCVGAIVDRNPYPI 433
Query: 604 VQEFPTSSTVMDLLERAGRGSSRWSPYGFPLK--EELRPRLNH 644
Q + TV L E+ R S W + K ++R L H
Sbjct: 434 SQPLQSGQTVEILTEQGKRPSPSWLTFVVSAKARSKIRTALKH 476
>gi|379727159|ref|YP_005319344.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
gi|376318062|dbj|BAL61849.1| GTP pyrophosphokinase [Melissococcus plutonius DAT561]
Length = 739
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/359 (41%), Positives = 220/359 (61%), Gaps = 16/359 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V KA A +AH GQ+R SG+PY++H ++ A +LA + + VA G LHD ++D ++
Sbjct: 27 LVKKALDYASQAHEGQIRKSGEPYIIHPIQVAGILADLHMDPYTVATGFLHDVVEDTEIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG +A LV+GV+KL ++ + E A M LAMA D R +L+
Sbjct: 87 LDDLKDEFGESIAVLVDGVTKLGKIKYKSHEEQLAENH------RKMLLAMAQDLRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R AKETLEI+ PLA+RLGIS K +LE+ +++NP+Q+
Sbjct: 141 KLADRLHNMRTLKYLREDKQRRIAKETLEIYAPLAHRLGISRVKWELEDTALRYINPNQY 200
Query: 379 TE----LSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKL 434
+ SK +E E+ + A++++ + IS + GR K +YSI+ KM +K
Sbjct: 201 YRIVHLMQSKRIE--RESYIAQAVDEICYVTNELGISAEI-YGRPKHIYSIYRKMKDQKK 257
Query: 435 TMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG 494
+EI+D+ +R+I+++ +DCY L +H W +PG+ KDYI PK N YQS+HT V G
Sbjct: 258 QFNEIYDLLAIRVIIDSIKDCYAVLGAIHTKWMPMPGRFKDYIAMPKTNMYQSIHTTVIG 317
Query: 495 EGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG--DCQHSSFVLQMVEWARWVLTWQCEA 551
P+E+QIRT+EMH AEFG AAHW YKEG D S+ + + ++W R ++ Q E+
Sbjct: 318 PMGNPIEIQIRTREMHKIAEFGVAAHWAYKEGKADRLKSNDLSKQLDWFREIVELQDES 376
>gi|68536125|ref|YP_250830.1| GTP pyrophosphokinase [Corynebacterium jeikeium K411]
gi|68263724|emb|CAI37212.1| GTP pyrophosphokinase [Corynebacterium jeikeium K411]
Length = 755
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 223/368 (60%), Gaps = 18/368 (4%)
Query: 193 HKIF--REDFVI--KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGL 248
H+ F R D + +A+ AE+ H G R SG+PY+ H + A + A IG ++T V A L
Sbjct: 37 HRRFHPRADLALLNRAYATAEKLHEGVKRKSGEPYITHPLAVATIAAEIGMDTTTVVAAL 96
Query: 249 LHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFL 308
LHDT++D S + + R FG+ VA LV+GV+KL ++ EA+ + M +
Sbjct: 97 LHDTVEDTDYSLEDLSRDFGSEVARLVDGVTKLDKV--------VLGSAAEAETIRKMIV 148
Query: 309 AMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLEN 367
AMA D R ++IK++DRLHNM T+ LP K+ + A+ETLE+ PLA+RLG++T K +LE+
Sbjct: 149 AMAEDPRVLVIKVSDRLHNMRTMRFLPPEKQAKKARETLEVIAPLAHRLGMATVKWELED 208
Query: 368 LCFKHLNPDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSI 425
L F L P ++ E+ + + + + +++E A+ ++ V GR K +SI
Sbjct: 209 LAFAILYPKKYDEIVRLVADRAPKRDQYLAKVKQEIELAMSRSSLHATV-EGRPKHYWSI 267
Query: 426 HCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGY 485
+ KM+ + DEI D+ G+R++V++ +DCY A+ +H L+ +PG+ KDYI+ P+F Y
Sbjct: 268 YQKMIVRGRDFDEIFDLVGVRILVDSVQDCYAAVGAIHTLYQPMPGRFKDYISSPRFGVY 327
Query: 486 QSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE--GDCQHSSFVLQMVEWARW 543
QSLHT V G PLEVQIRT EMH AE+G AAHWRYKE G+ S + + W R
Sbjct: 328 QSLHTTVIGPDNKPLEVQIRTHEMHHNAEYGIAAHWRYKETRGNNNSESAEVDQMAWMRQ 387
Query: 544 VLTWQCEA 551
+L WQ EA
Sbjct: 388 LLDWQKEA 395
>gi|418473911|ref|ZP_13043452.1| GTP pyrophosphokinase [Streptomyces coelicoflavus ZG0656]
gi|371545466|gb|EHN74085.1| GTP pyrophosphokinase [Streptomyces coelicoflavus ZG0656]
Length = 847
Score = 271 bits (694), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 188
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 382 SSKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAVVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 356
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 416
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 417 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWL 476
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 477 RQLLDWQKE 485
>gi|410459965|ref|ZP_11313653.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
gi|409927803|gb|EKN64929.1| GTP pyrophosphokinase [Bacillus azotoformans LMG 9581]
Length = 733
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 153/354 (43%), Positives = 217/354 (61%), Gaps = 12/354 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV A+ AE AH Q R SG+PY++H ++ A +LA + + VAAG LHD ++D ++
Sbjct: 27 FVEAAYKYAEAAHSEQYRKSGEPYIIHPIQVAGILAELEMDPVAVAAGFLHDVVEDTEVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LKDLEVAFNKEVAMLVDGVTKLGKIKYKSKEAQ------QAENHRKMFIAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIST K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPPEKQRRISNETLEIFAPLAHRLGISTIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V I+++ + L + ++ + GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKNKRAERENQVHEVIDEIRKRLDEVHLKADI-SGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++VE+ +DCY L V+H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRVLVESIKDCYAVLGVIHTCWKPMPGRFKDYIAMPKANMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD--CQHSSFVLQMVEWARWVLTWQ 548
PLEVQIRT EMH AE+G AAHW YKEG Q+ + + + W R +L WQ
Sbjct: 320 GDPLEVQIRTTEMHQIAEYGIAAHWAYKEGKQITQNRENLQEKMTWFREILEWQ 373
>gi|224823882|ref|ZP_03696991.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
gi|224604337|gb|EEG10511.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania ferrooxidans
2002]
Length = 722
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 10/352 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF + AH GQ R SG+PY+ H + A +L + +AA LLHD L+D ++
Sbjct: 44 QAFELSRAAHEGQTRKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPT 103
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG +ADLV+G+SKL +L +E T +A+ M LAMA D R +++KLA
Sbjct: 104 LVEKFGRTIADLVDGLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLA 157
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TLDA+ KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ L
Sbjct: 158 DRLHNMRTLDAMREDKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVL 217
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S + +V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+
Sbjct: 218 SKAVRAARGNRREVVSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEV 276
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIYG R+IV + CY AL +H L+ +PGK KDYI PK NGYQSLHT + G P
Sbjct: 277 LDIYGFRVIVNDVPSCYLALGALHSLYKPIPGKFKDYIAIPKGNGYQSLHTTLFGPYGTP 336
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT+EM+ AE G A+HW YK GD + + +W + +L Q E+
Sbjct: 337 VEMQIRTREMNSVAEAGVASHWMYKSGDASLDAAHQRTHQWLQSILDIQAES 388
>gi|444431948|ref|ZP_21227108.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia soli NBRC 108243]
gi|443887122|dbj|GAC68829.1| GTP pyrophosphokinase/guanosine-3',5'-bis (diphosphate)
3-pyrophosphohydrolase [Gordonia soli NBRC 108243]
Length = 811
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 150/359 (41%), Positives = 214/359 (59%), Gaps = 19/359 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H GQ+R SGDPY+ H + A +LA +G ++T + A LLHDT++D S +
Sbjct: 105 QAYDVADERHTGQVRKSGDPYITHPLAVATILADLGMDTTTLVAALLHDTVEDTGYSLEQ 164
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG+ VA LV+GV+KL +++ EA+ + M +AMA D R ++IK+A
Sbjct: 165 LESEFGSEVAHLVDGVTKLDKVA--------LGSAAEAETIRKMIIAMARDPRVLVIKVA 216
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG++T K +LE+L F L+P ++ E+
Sbjct: 217 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMATVKWELEDLSFAILHPKRYEEI 276
Query: 382 SSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + + AL IS V GR K +SI+ KM+ K D+I
Sbjct: 277 VRLVADRAPSRDTYLARVRADINNALSAARISATV-EGRPKHYWSIYQKMIVKGREFDDI 335
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
HD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P+F YQSLHT V G P
Sbjct: 336 HDLVGMRILCDQVRDCYAAVGVVHSLWQPMAGRFKDYIAQPRFGVYQSLHTTVIGPEGKP 395
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ-------HSSFVLQMVEWARWVLTWQCEA 551
LEVQIRT +MH AEFG AAHWRYKE + S + + W R +L WQ EA
Sbjct: 396 LEVQIRTTDMHRTAEFGIAAHWRYKETRNRGKTAKRPSDSAEIDDMAWMRQLLDWQREA 454
>gi|260101667|ref|ZP_05751904.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
gi|260084527|gb|EEW68647.1| GTP diphosphokinase [Lactobacillus helveticus DSM 20075]
Length = 746
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 143/335 (42%), Positives = 204/335 (60%), Gaps = 18/335 (5%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A +AH GQ RASG PY++H + A LA +G + + AG LHDT++D ++
Sbjct: 27 FVEKAYEFANKAHAGQKRASGQPYIIHPTQVAGTLATLGLDPDTIVAGFLHDTVEDTPVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG V +V+GV+KL++ + + A+ M +AMA D R +++
Sbjct: 87 NDELKEKFGEDVTFIVDGVTKLNKYEY------KSHQEFLAENHRKMLIAMAKDLRVIMV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++ + ET++I+ PLA+RLGI T K +LE++ F +LNP
Sbjct: 141 KLADRLHNMHTLQHLRPDKQRWISSETMDIYAPLADRLGIGTIKWELEDMSFHYLNP--- 197
Query: 379 TELSSKLVECFD------EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
E ++V D E + I+ L++ L + I + + GR K +YSI+ KM+ K
Sbjct: 198 -EAYYRIVNLMDVKRSQREKYIADTIKTLKKTLDELGIKYEIY-GRPKHIYSIYKKMVNK 255
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
DEI+D+ +R+IV+N DCY L VH W +PG+ KDYI PK NGYQSLHT +
Sbjct: 256 HKDFDEIYDLLAVRVIVKNVRDCYAVLGAVHTEWKPMPGRFKDYIAMPKVNGYQSLHTTI 315
Query: 493 TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
G G PLE+QIRT++MH AE+G AAHW YK G+
Sbjct: 316 IGPGGRPLEIQIRTEQMHEVAEYGVAAHWAYKRGN 350
>gi|380302298|ref|ZP_09851991.1| (p)ppGpp synthetase, RelA/SpoT family protein [Brachybacterium
squillarum M-6-3]
Length = 809
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/357 (41%), Positives = 211/357 (59%), Gaps = 17/357 (4%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
V +A+ AERAHRGQ R SGDPY+ H V A +LA +G+ + VVAA LLHDT++D S
Sbjct: 81 LVQRAYTVAERAHRGQQRKSGDPYITHPVSVATILAELGSPAEVVAAALLHDTVEDTDYS 140
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + FG +A +V+GV+KL ++ T + +A+ + M +AM+ D R +LI
Sbjct: 141 LDQLRADFGEVIAVMVDGVTKLDKV--------TYGEAAQAETVRKMIVAMSRDVRVLLI 192
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHN T +P +R AKETLEI+ PLA+RLG++T K +LE+ F+ L P +
Sbjct: 193 KLADRLHNARTWKYVPAASAERKAKETLEIYAPLAHRLGLNTIKWELEDRSFQVLYPKVY 252
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
E+ + + + E + S ++ + LK I V GR K YSI+ KM+ +
Sbjct: 253 EEIVALVAQHAPAREQYLRSVSGQILEDLKQARIKAEV-TGRPKHYYSIYQKMIVRGRDF 311
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+I+D+ G+R++V+ DCY L +H W+ VPG+ KDYI PKFN YQSLHT V G
Sbjct: 312 ADIYDLVGVRVLVDTVRDCYAVLGTLHARWSPVPGRFKDYIALPKFNLYQSLHTTVIGPT 371
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF-----VLQMVEWARWVLTWQ 548
P+E+QIRT EMH +AE+G AAHW+YK + W R ++ WQ
Sbjct: 372 GKPVEIQIRTWEMHRRAEYGVAAHWKYKAMAGGAPGGAAAQPIASEGAWLRQLMDWQ 428
>gi|384160293|ref|YP_005542366.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|384169371|ref|YP_005550749.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
gi|328554381|gb|AEB24873.1| GTP pyrophosphokinase (RelA/SpoT) [Bacillus amyloliquefaciens
TA208]
gi|341828650|gb|AEK89901.1| GTP pyrophosphokinase [Bacillus amyloliquefaciens XH7]
Length = 734
Score = 271 bits (693), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 147/356 (41%), Positives = 216/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ A+ AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAQDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ +F+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKIFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMALQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVGSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEEATFEKKLSWFREILEFQNES 375
>gi|1589235|prf||2210370A (p)ppGpp synthetase
Length = 698
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 188
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 382 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAVVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 356
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 416
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 417 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWL 476
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 477 RQLLDWQKE 485
>gi|413963295|ref|ZP_11402522.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
gi|413929127|gb|EKS68415.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. SJ98]
Length = 798
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 213/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 84 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTK 143
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 144 TEIAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 197
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++
Sbjct: 198 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYA 257
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +V +E +++ + D I+ V GR K++YSI+ KM K+L+
Sbjct: 258 TLEKAVKAARGNRREVVGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFS 316
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE +CY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 317 QVLDVYGFRVVVEGALECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 376
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E QIRT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 377 APIEFQIRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 430
>gi|389571985|ref|ZP_10162073.1| GTP diphosphokinase [Bacillus sp. M 2-6]
gi|388428471|gb|EIL86268.1| GTP diphosphokinase [Bacillus sp. M 2-6]
Length = 736
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 225/377 (59%), Gaps = 21/377 (5%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A+E+L+ ++ F+ +A+ AE AH+ Q R SG+PY++H ++ A +L + +
Sbjct: 16 AREYLSAEHIQ-------FIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ +A G LHD ++D ++ + + F VA LV+GV+KL ++ ++E +A+
Sbjct: 69 STIAGGFLHDVVEDTDVTLEDLKEHFNEEVAMLVDGVTKLGKIKYKSQEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS
Sbjct: 123 NHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISK 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++LNP Q+ + + K E + + +++ + + NI GR
Sbjct: 183 IKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLDEVVNEVKDRVSEVNIK-AEFSGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+ + +EI+D+ +R++V++ +DCY L ++H W +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMVMQNKQFNEIYDLLAVRILVDSIKDCYAVLGIIHTCWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFV 534
PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW YKEG + +
Sbjct: 302 MPKPNMYQSLHTTVIGPKGDPLEVQIRTVEMHEIAEYGIAAHWAYKEGKESAESTEEAVF 361
Query: 535 LQMVEWARWVLTWQCEA 551
+ + W R +L +Q E+
Sbjct: 362 QKKLSWFREILEFQNES 378
>gi|377820111|ref|YP_004976482.1| (p)ppGpp synthetase SpoT/RelA [Burkholderia sp. YI23]
gi|357934946|gb|AET88505.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Burkholderia sp. YI23]
Length = 786
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/354 (40%), Positives = 214/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ + A LLHD ++D ++
Sbjct: 73 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQSIMAALLHDVIEDQGVTK 132
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
I FGA VA+LV+G+SKL ++ RE +A+ M LAMA D R +L+K
Sbjct: 133 TEIAERFGAKVAELVDGLSKLDKMEFRNREE------AQAENFRKMLLAMARDVRVILVK 186
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P KR+R A+ETL+I+ P+A+RLG++ +L++L F + NP+++
Sbjct: 187 LADRLHNMRTLGAVPPEKRRRVARETLDIYAPIAHRLGLNNTYRELQDLSFANFNPNRYA 246
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K +V +E +++ + D I+ V GR K++YSI+ KM K+L+
Sbjct: 247 TLEKAVKAARGNRREVVGKILEAVQRTIADAKINAEV-TGREKTIYSIYKKMRDKQLSFS 305
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++VE+ +CY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 306 QVLDVYGFRVVVESALECYTCIGALHALYKPVPGKFKDYIAIPKVNGYQSLHTTLVGPFG 365
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E QIRT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 366 APIEFQIRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 419
>gi|242241344|ref|YP_002989525.1| bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis
pyrophosphate 3'-pyrophosphohydrolase [Dickeya dadantii
Ech703]
gi|242133401|gb|ACS87703.1| (p)ppGpp synthetase I, SpoT/RelA [Dickeya dadantii Ech703]
Length = 700
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 154/354 (43%), Positives = 209/354 (59%), Gaps = 10/354 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYIVARDAHEGQTRSSGEPYITHPVAVACILAEMRLDYETLMAALLHDVIEDTPATYQD 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I R FG VA+LVEGVSKL +L K +A+ M +AM D R +LIKLA
Sbjct: 85 IERLFGKSVAELVEGVSKLDKL------KFRDKKEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHLKTELEELGFEALYPNRYRVI 198
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K + M+ + ++E LK+ IS V GR K LYSI+CKM K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLKEAGISCRV-SGREKHLYSIYCKMHLKEQRFHSI 257
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIY R+IV+ + CY+ L VH L+ P ++KDYI PK NGYQSLHT + G VP
Sbjct: 258 MDIYAFRVIVKEVDTCYRVLGQVHSLYKPRPARVKDYIAIPKANGYQSLHTSLIGPHGVP 317
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
+EVQIRT++M AE G AAHW YKEG+ ++ ++ W + +L Q A S
Sbjct: 318 VEVQIRTEDMDQMAEMGVAAHWAYKEGESSSTTAQVRAQRWMQSLLELQQSAGS 371
>gi|365175246|ref|ZP_09362677.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
gi|363613138|gb|EHL64661.1| RelA/SpoT family protein [Synergistes sp. 3_1_syn1]
Length = 784
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 144/327 (44%), Positives = 206/327 (62%), Gaps = 10/327 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF + AH Q R +G+PY++H V A +L+++ + + A LLHD L+D +
Sbjct: 78 EAFVFSSVAHGKQRRHTGEPYIIHTVSVAAILSSMEIDRETIVASLLHDVLEDTATTPQQ 137
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V LV+GV+KL +L + E +++ L MF+ MA D R VLIKLA
Sbjct: 138 LSEKFGEDVVILVDGVTKLGKLQFKSVEE------YQSENLRKMFVVMAKDIRVVLIKLA 191
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ + K+ A+ETLEI+ PLA+RLGI K +LE+L F+ L+P+ + ++
Sbjct: 192 DRLHNMRTISSHKREKQLSIARETLEIYAPLAHRLGIYQVKRELEDLSFRILDPEMYYDI 251
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
++ + E ++ A++ LEQ LKD NI+ + GR K YSI+ KM +K L+++++
Sbjct: 252 KRRVRKKLPEREGIIKEAMDTLEQRLKDDNINASI-KGRPKHFYSIYEKMRRKNLSLEQL 310
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ LR+IV+ +CYQ L +VH +W +PG DYI PK N YQSLHT V G P
Sbjct: 311 YDLLALRVIVKTIGECYQVLGLVHTIWKPIPGLFDDYIANPKSNMYQSLHTTVVGPEGEP 370
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEG 526
LEVQIRTKEMHL AE+G AAHW YKEG
Sbjct: 371 LEVQIRTKEMHLLAEYGIAAHWNYKEG 397
>gi|347541215|ref|YP_004848641.1| (p)ppGpp synthetase I SpoT/RelA [Pseudogulbenkiania sp. NH8B]
gi|345644394|dbj|BAK78227.1| (p)ppGpp synthetase I, SpoT/RelA [Pseudogulbenkiania sp. NH8B]
Length = 718
Score = 271 bits (693), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 149/352 (42%), Positives = 213/352 (60%), Gaps = 10/352 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+AF + AH GQ R SG+PY+ H + A +L + +AA LLHD L+D ++
Sbjct: 40 QAFELSRAAHEGQTRKSGEPYITHPLAVATMLTEWRLDVQGLAAALLHDVLEDTGVTKPT 99
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG +ADLV+G+SKL +L +E T +A+ M LAMA D R +++KLA
Sbjct: 100 LVEKFGRTIADLVDGLSKLERLEYQTKE------TAQAENFRKMVLAMARDIRVIIVKLA 153
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM TLDA+ KRQR A ETLEI+ P+ANR+G++ +L++L FKHL+P ++ L
Sbjct: 154 DRLHNMRTLDAMREDKRQRIALETLEIYAPIANRIGLNKVYRELQDLAFKHLHPHRYHVL 213
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
S + +V+ + + Q L + NI + GR K+L+SI+ KM +K L+ E+
Sbjct: 214 SKAVRAARGNRREVVSKILHSVSQKLVECNIE-ATIKGREKNLFSIYKKMQEKHLSFSEV 272
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIYG R+IV + CY AL +H L+ +PGK KDYI PK NGYQSLHT + G P
Sbjct: 273 LDIYGFRVIVNDVPSCYLALGALHSLYKPIPGKFKDYIAIPKGNGYQSLHTTLFGPYGTP 332
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
+E+QIRT+EM+ AE G A+HW YK GD + + +W + +L Q E+
Sbjct: 333 VEMQIRTREMNSVAEAGVASHWMYKSGDASLDAAHQRTHQWLQSILDIQAES 384
>gi|440695076|ref|ZP_20877632.1| GTP diphosphokinase [Streptomyces turgidiscabies Car8]
gi|440282826|gb|ELP70233.1| GTP diphosphokinase [Streptomyces turgidiscabies Car8]
Length = 748
Score = 271 bits (693), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 153/366 (41%), Positives = 215/366 (58%), Gaps = 31/366 (8%)
Query: 204 AFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D D +
Sbjct: 36 AYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLDQL 95
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLAD 322
R FG VA LV+GV+KL ++ + +A+ + M +AMA D R ++IKLAD
Sbjct: 96 RRDFGDSVALLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLAD 147
Query: 323 RLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELS 382
RLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 148 RLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEIV 207
Query: 383 SKLVECF---DE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+ E DE A+VT ++ +A + K + GR K YS++ KM+ +
Sbjct: 208 RLVAERAPKRDEYLAIVTDEVQSDLRAARIK----ATVTGRPKHYYSVYQKMIVRGRDFA 263
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 264 EIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPNG 323
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV-------------LQMVEWARWV 544
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R +
Sbjct: 324 KPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRSDQPRATGKDDHLNDMAWLRQL 383
Query: 545 LTWQCE 550
L WQ E
Sbjct: 384 LDWQKE 389
>gi|148272990|ref|YP_001222551.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147830920|emb|CAN01864.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 749
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
++ + A+L H + +A+ AERAH GQ R SG+PY+ H V A +LA +G
Sbjct: 29 EQLIRTARLHHPKADMSLIERAYAVAERAHEGQKRKSGEPYITHPVAVAQILADLGIGPK 88
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+AA LLHDT++D + D + FG +A LV+GV+KL +L + +A+
Sbjct: 89 TLAAALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLK--------YGDSAQAET 140
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M +AM+ D R +++KLADRLHN T + +R AKETLEI+ PLA+RLGIST
Sbjct: 141 VRKMVVAMSKDIRVLVVKLADRLHNARTWGFVESASAERKAKETLEIYAPLAHRLGISTI 200
Query: 362 KVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 419
K +LE+L F L P + E+ + K E V I+ + L+ I V GR
Sbjct: 201 KWELEDLSFAVLYPKIYVEIENLVKQRTPQREEFVQQVIDSVNDDLRAAKIRGKV-AGRP 259
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K YSI+ KM+ + DEI+D+ G+R++V++ DCY L +H W VPG+ KDYI
Sbjct: 260 KQYYSIYQKMVVRGREFDEIYDLVGIRVLVDSLRDCYAVLGAIHARWTPVPGRFKDYIAT 319
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PKFN YQSLHT V G P+E+QIRT EMH +AEFG AAHW+YKE
Sbjct: 320 PKFNLYQSLHTTVIGPKGRPVEIQIRTHEMHQRAEFGVAAHWKYKE 365
>gi|170781154|ref|YP_001709486.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169155722|emb|CAQ00843.1| GTP pyrophosphokinase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 749
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 148/346 (42%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
++ + A+L H + +A+ AERAH GQ R SG+PY+ H V A +LA +G
Sbjct: 29 EQLIRTARLHHPKADMSLIERAYAVAERAHEGQKRKSGEPYITHPVAVAQILADLGIGPK 88
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+AA LLHDT++D + D + FG +A LV+GV+KL +L + +A+
Sbjct: 89 TLAAALLHDTVEDTEYTLDMLRHDFGDEIAMLVDGVTKLDKLKY--------GDSAQAET 140
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M +AM+ D R +++KLADRLHN T + +R AKETLEI+ PLA+RLGIST
Sbjct: 141 VRKMVVAMSKDIRVLVVKLADRLHNARTWGFVESASAERKAKETLEIYAPLAHRLGISTI 200
Query: 362 KVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRH 419
K +LE+L F L P + E+ + K E V I+ + L+ I V GR
Sbjct: 201 KWELEDLSFAVLYPKIYVEIENLVKQRTPQREEFVQQVIDSVNDDLRAAKIRGKV-AGRP 259
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K YSI+ KM+ + DEI+D+ G+R++V++ DCY L +H W VPG+ KDYI
Sbjct: 260 KQYYSIYQKMVVRGREFDEIYDLVGIRVLVDSLRDCYAVLGAIHARWTPVPGRFKDYIAT 319
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PKFN YQSLHT V G P+E+QIRT EMH +AEFG AAHW+YKE
Sbjct: 320 PKFNLYQSLHTTVIGPKGRPVEIQIRTHEMHQRAEFGVAAHWKYKE 365
>gi|406706298|ref|YP_006756651.1| RelA/SpoT family (p)ppGpp synthetase [alpha proteobacterium HIMB5]
gi|406652074|gb|AFS47474.1| (p)ppGpp synthetase, RelA/SpoT family [alpha proteobacterium HIMB5]
Length = 582
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/367 (40%), Positives = 229/367 (62%), Gaps = 15/367 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
++E + ++ +K + + KA+ A +AH+ Q RASGDPY +H + A +L + +S
Sbjct: 4 SEELINKIKIYNKFLNPEKLDKAYNFAVKAHKDQKRASGDPYSVHPIAVANILTELKLDS 63
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+A GLLHDT++D + +Y+ I FG VADLVEGV+K+S NTA+ +A+
Sbjct: 64 ATIATGLLHDTIEDTYATYETIKNEFGEEVADLVEGVTKISVFE------NTAASNSKAE 117
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPL-CKRQRFAKETLEIFVPLANRLGIS 359
+ LA + D R +L+K+ADRLHNM T+DA+ KR+R A+ET+EI+ PLA+R+G+
Sbjct: 118 NFRKLILATSKDIRVLLVKIADRLHNMRTIDAITKEEKRKRIAQETMEIYAPLADRMGMH 177
Query: 360 TWKVQLENLCFKHLNPDQHTELSSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLC 416
+ +LE+L FK LN T + +KL E + + T +IE L + L D I + +
Sbjct: 178 RIRDELEDLSFKILNNQARTLIKNKLDEIKEDKKDTFETLSIE-LTELLNDHKI-YAEIY 235
Query: 417 GRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDY 476
GR K+ +SI K+ KK++++++I DI G R+I+ +DCY+ L + H+ W VPGK KDY
Sbjct: 236 GREKTPFSIWRKVQKKRVSLEQITDIIGFRIILNTVDDCYKTLGIFHKKWNCVPGKFKDY 295
Query: 477 ITRPKFNGYQSLHT-VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVL 535
I+ PK NGY+S+HT VV G P+E+QIRT MH AE G A+HW+YK + + +S
Sbjct: 296 ISSPKINGYKSIHTSVVIGPNQKPIEIQIRTMSMHEFAERGIASHWQYKSSE-KFNSVSW 354
Query: 536 QMVEWAR 542
+ +W +
Sbjct: 355 KEYDWLK 361
>gi|333983378|ref|YP_004512588.1| (p)ppGpp synthetase I SpoT/RelA [Methylomonas methanica MC09]
gi|333807419|gb|AEG00089.1| (p)ppGpp synthetase I, SpoT/RelA [Methylomonas methanica MC09]
Length = 725
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 222/354 (62%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+++A++ + AH GQ R SG+ Y+ H V A+ LA++ ++ + A +LHD ++D +S
Sbjct: 40 IVRAYHFSAAAHSGQFRKSGEAYICHPVSVAITLASMHMDAHGIMAAILHDVIEDTPISK 99
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG VA LV+GV+KLS++ +R +A+ + MFLAMA D R +++K
Sbjct: 100 EQLAEEFGQEVAALVDGVTKLSKIDSRSRAE------AQAENVRKMFLAMAQDLRVIVVK 153
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM T+ +P+ K++R AKETLEI+ P+ANRLG++ + QLE+L FK L P++ T
Sbjct: 154 LADRLHNMQTMGNMPMDKKRRIAKETLEIYAPIANRLGMNDIRHQLESLGFKALYPNRFT 213
Query: 380 ELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+S+ + + + ++ + ++ L + +I V GR K++ SI+ KML KK++
Sbjct: 214 AISNAVKKSRGNRKEIIDTIQSSIQNRLLETDIDAKV-SGREKNIASIYQKMLHKKISFT 272
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+Y R+ +DCY+AL VH L+ +PG+ KDYI PK NGYQSLHT++ G
Sbjct: 273 DVFDVYAFRIYCHQVDDCYRALGCVHNLFKPIPGRFKDYIALPKANGYQSLHTILIGPYG 332
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
VP+E+QIRT EMH +E G AAHW YK + + + + EW R +L Q A
Sbjct: 333 VPIEIQIRTHEMHRLSESGIAAHWLYKSDNEKSETIQARANEWLRDLLEIQKSA 386
>gi|227542210|ref|ZP_03972259.1| GTP pyrophosphokinase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227182039|gb|EEI63011.1| GTP pyrophosphokinase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 763
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 145/359 (40%), Positives = 224/359 (62%), Gaps = 16/359 (4%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + +A++ AER H G R SGDPY+ H + A + A +G ++T V A LLHDT++D
Sbjct: 50 DTIERAYHTAERLHEGVQRKSGDPYITHPLAVATISAEMGMDTTTVVASLLHDTVEDTEY 109
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMAD-ARAVL 317
+ + + R FGA VA LV+GV+K+ +++ A EA+ + M +AMAD R ++
Sbjct: 110 TLEDLTRDFGAEVAKLVDGVTKIDKVALGA--------AAEAETIRKMVVAMADDPRVLV 161
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IK++DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P +
Sbjct: 162 IKVSDRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGLASVKWELEDLSFAILYPKK 221
Query: 378 HTELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ E+ + E + + I +++ LK +I + GR K +SI+ KM +
Sbjct: 222 YDEIVRLVAERAPARDRQLKEIISAVKKELKANHI-IAEVVGRPKHYWSIYKKMTDRGHD 280
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+E+ D+ G+R++V+ + CY+A+ V+H L+ +PG+ KDYI+ P++ Y+SLHT + G
Sbjct: 281 FNELFDLVGIRILVDTKALCYEAIGVMHSLYPALPGRFKDYISNPRYGVYESLHTTLLGP 340
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 551
PLEVQ+RT EMH QAE+G AAHWRYKE +H+ + V QM W R +L WQ EA
Sbjct: 341 NGKPLEVQVRTHEMHYQAEYGIAAHWRYKETKGKHTGGQAEVDQMA-WMRQLLDWQKEA 398
>gi|407980717|ref|ZP_11161494.1| GTP diphosphokinase [Bacillus sp. HYC-10]
gi|407412525|gb|EKF34317.1| GTP diphosphokinase [Bacillus sp. HYC-10]
Length = 736
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/377 (38%), Positives = 225/377 (59%), Gaps = 21/377 (5%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
A+E+L+ ++ F+ +A+ AE AH+ Q R SG+PY++H ++ A +L + +
Sbjct: 16 AREYLSAEHIQ-------FIERAYEYAENAHKEQYRKSGEPYIIHPIQVAGILVDLEMDP 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ +A G LHD ++D ++ + + F VA LV+GV+KL ++ ++E +A+
Sbjct: 69 STIAGGFLHDVVEDTDVTLEDLKEHFNEEVAMLVDGVTKLGKIKYKSQEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
MF+AMA D R +LIKLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS
Sbjct: 123 NHRKMFVAMAQDIRVILIKLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISK 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++LNP Q+ + + K E + + +++ + + NI GR
Sbjct: 183 IKWELEDTALRYLNPQQYYRIVNLMKRKRAEREEYLDEVVNEVKDRVSEVNIK-AEFSGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+ + +EI+D+ +R++V++ +DCY L ++H W +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMVLQNKQFNEIYDLLAVRILVDSIKDCYAVLGIIHTCWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFV 534
PK N YQSLHT V G PLEVQIRT EMH AE+G AAHW YKEG + +
Sbjct: 302 MPKPNMYQSLHTTVIGPKGDPLEVQIRTVEMHEIAEYGIAAHWAYKEGKESAESTEEAVF 361
Query: 535 LQMVEWARWVLTWQCEA 551
+ + W R +L +Q E+
Sbjct: 362 QKKLSWFREILEFQNES 378
>gi|21220013|ref|NP_625792.1| GTP pyrophosphokinase [Streptomyces coelicolor A3(2)]
gi|289772775|ref|ZP_06532153.1| GTP pyrophosphokinase [Streptomyces lividans TK24]
gi|1710083|sp|P52560.1|RELA_STRCO RecName: Full=GTP pyrophosphokinase; AltName: Full=(p)ppGpp
synthase; AltName: Full=ATP:GTP
3'-pyrophosphotransferase; AltName: Full=ppGpp synthase
I
gi|1147593|emb|CAA60717.1| putative ppGpp synthetase [Streptomyces coelicolor A3(2)]
gi|6822209|emb|CAB70915.1| GTP pyrophosphokinase [Streptomyces coelicolor A3(2)]
gi|289702974|gb|EFD70403.1| GTP pyrophosphokinase [Streptomyces lividans TK24]
Length = 847
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 188
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 382 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAVVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 356
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 416
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 417 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWL 476
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 477 RQLLDWQKE 485
>gi|206890423|ref|YP_002248838.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206742361|gb|ACI21418.1| GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp
synthetase I) ((P)ppGpp synthetase) [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 702
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/330 (43%), Positives = 208/330 (63%), Gaps = 10/330 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
+ + KA+ + AH Q R G PY+ H + A +LA + +ST +AAGLLHDT++DA +
Sbjct: 21 ELIKKAYIFSREAHCAQKRKEGIPYIYHPLAVAAILADMKLDSTTIAAGLLHDTVEDAEM 80
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ D I F VA LV+ V+KLS+L + + +A+ MFLAM+ D R +L
Sbjct: 81 TIDDIGEIFTPDVAFLVDAVTKLSKL------QFSTVEEAQAESFRKMFLAMSKDIRVIL 134
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IK ADRLHNM T++ LP K++R AKETLEI+ PLANRLGI + + E+L FK L PD+
Sbjct: 135 IKFADRLHNMRTIEFLPPDKQKRIAKETLEIYAPLANRLGIGWMRSEFEDLSFKVLYPDE 194
Query: 378 HTELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + + +A + + I L + + NI F + GR K Y I+ K++K+K+
Sbjct: 195 YDDLVKKVAKRKEDQQAYIDNVINILSEKISAMNIPFKIY-GRVKHYYGIYQKLIKQKIP 253
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
++++D+ G+R+I + CY L ++H LW +PG+ KD+I+ PK N YQSLHT V G
Sbjct: 254 FEQVYDVIGIRIITDTVPHCYDILGIIHSLWTLIPGRFKDFISLPKSNYYQSLHTTVIGP 313
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
G +E QIRT+EM + AE G AAHWRYKE
Sbjct: 314 GGERVEFQIRTEEMDIIAEEGIAAHWRYKE 343
>gi|374606535|ref|ZP_09679392.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus dendritiformis C454]
gi|374387846|gb|EHQ59311.1| (p)ppGpp synthetase I SpoT/RelA [Paenibacillus dendritiformis C454]
Length = 725
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/355 (41%), Positives = 217/355 (61%), Gaps = 11/355 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D V +A+ AE+AH GQ+R SG+PY+LH + A ++ ++ + T V A LLHD ++D +
Sbjct: 20 DRVREAYLFAEQAHSGQVRKSGEPYILHPLAVADIVVSMQMDPTSVVAALLHDVVEDTSV 79
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
S + + FG A LV+G++KL ++ ++E + + MF+AMA D R ++
Sbjct: 80 SLEEVRTKFGNTCAMLVDGLTKLERIQFRSKEEQ------QNENYRKMFVAMANDIRVIV 133
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL ++R A ETLEIF P+A+RLGIS K ++E++ ++LNP Q
Sbjct: 134 IKLADRLHNMRTLKYQSEESQRRIAYETLEIFCPIAHRLGISAIKWEMEDIALRYLNPQQ 193
Query: 378 HTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +++ + E + I ++++ L++ I+ L GR K +YS++ KM K
Sbjct: 194 YYRIANLMHKKRAEREQYIADVIGRIQEKLEEMGIT-ADLSGRPKHIYSVYKKMTAKSKQ 252
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+EI+D+ +R+IV+N +DCY L ++H LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 253 FNEIYDLLAIRIIVDNIKDCYATLGIIHTLWKPMPGRFKDYIAMPKTNMYQSLHTTVIGP 312
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCE 550
P EVQIRT EMH AE+G AAHW YKEG SF +M + R +L Q E
Sbjct: 313 TGEPTEVQIRTWEMHRTAEYGIAAHWAYKEGGANSGSFEEKMT-FLREILDLQQE 366
>gi|308233820|ref|ZP_07664557.1| (p)ppGpp synthetase I, SpoT/RelA [Atopobium vaginae DSM 15829]
gi|328944552|ref|ZP_08242013.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
gi|327490953|gb|EGF22731.1| GTP diphosphokinase [Atopobium vaginae DSM 15829]
Length = 796
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 151/358 (42%), Positives = 212/358 (59%), Gaps = 16/358 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA-IGANSTVVAAGLLHDTLDDAFLSYD 261
+A+ A H+ QMR SG+PY+ H VE A +LA + + + A LLHDT++D + D
Sbjct: 63 EAYDFASTYHKKQMRQSGEPYINHPVEVAFILAKDLHMDEDSICAALLHDTVEDTSATLD 122
Query: 262 YIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKL 320
I FG V DLV+GV+KL+ + + + +A L MFLAM+ D R ++IKL
Sbjct: 123 DIRNLFGETVMDLVDGVTKLTSIEVSSMDEK------QALNLRKMFLAMSKDIRVIIIKL 176
Query: 321 ADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ--H 378
ADRLHNM TL ALP +R A+ET++++ PLA+RLGIS+ K +LE+L F +L D+ H
Sbjct: 177 ADRLHNMRTLAALPPHRRNFKARETMDVYAPLADRLGISSIKWELEDLAFLYLEHDEYEH 236
Query: 379 TELSSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
L + E +TS I LEQ L IS + GR K L+SI+ KML+K + ++
Sbjct: 237 VALMVQETRAQREQNITSTIHMLEQELHKVGISDFQIQGRPKHLWSIYQKMLRKDKSFND 296
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
I+D+ +R++ ++ DCY AL VH +W +PG+ KDYI PK NGY+SLHT V G
Sbjct: 297 IYDLVAIRVLTKSVGDCYLALGAVHTIWHPLPGRFKDYIAMPKPNGYRSLHTTVVGVDAR 356
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF------VLQMVEWARWVLTWQCE 550
P+E+QIRT EMH QAE+G AAHW YK+ + + W R L W +
Sbjct: 357 PIEIQIRTFEMHDQAEYGIAAHWLYKKNGSSTGKMSRDEEEIDSQINWIRRSLDWAVD 414
>gi|160947570|ref|ZP_02094737.1| hypothetical protein PEPMIC_01505 [Parvimonas micra ATCC 33270]
gi|158446704|gb|EDP23699.1| RelA/SpoT family protein [Parvimonas micra ATCC 33270]
Length = 717
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 221/355 (62%), Gaps = 13/355 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+ KA+ + H GQ R SG+PY +H V A +LA + + + AGL+HD L+D +++
Sbjct: 21 ITKAYNFTKECHEGQFRNSGEPYFIHPVAVANILADLYMDDATIIAGLMHDILEDTEVTF 80
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAM-ADARAVLIK 319
+ + FG +A+LV+GV+KL ++ +++ + +AD L M LAM +D R ++IK
Sbjct: 81 EEMSGMFGEEIANLVDGVTKLKKIKYQSKQES------QADNLRKMLLAMNSDIRVIIIK 134
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
+ADRLHN+ TL+ + K+ AKETLEI+ PLA RLG+S K +LE+L ++L P+ +
Sbjct: 135 IADRLHNIRTLEYMKKAKQLEKAKETLEIYAPLAYRLGMSNVKWELEDLSLRYLEPEIYY 194
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
+L+ ++ + E ++ IE++ +LK+ NI + GR KSLYSI+ KM K+ + D
Sbjct: 195 DLAERVKKKRSEREKIINDIIEEISISLKEHNIQGEI-SGRPKSLYSIYKKMYKQNKSFD 253
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLH-TVVTGEG 496
EI D+ +R+IV DCY L +VH W +P + KDYI PK N YQSLH T+++ G
Sbjct: 254 EIFDLTAIRIIVPTISDCYAVLGIVHSKWKPIPSRFKDYIAVPKPNLYQSLHNTLISTSG 313
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
V EVQIRT EMH AE+G AAHW+YK G + +SF ++ W R ++ WQ E
Sbjct: 314 DV-FEVQIRTFEMHRTAEYGIAAHWKYKAGVDRSTSFDDKLT-WLRQLMDWQREV 366
>gi|289706223|ref|ZP_06502586.1| GTP diphosphokinase [Micrococcus luteus SK58]
gi|289557062|gb|EFD50390.1| GTP diphosphokinase [Micrococcus luteus SK58]
Length = 759
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 150/358 (41%), Positives = 207/358 (57%), Gaps = 13/358 (3%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
+++AF A AH GQMR SGDPY+ H V A +LA IG + A LLHDT++D S
Sbjct: 51 IVRAFEVARAAHEGQMRRSGDPYITHPVAVATILAEIGVTGPTLLAALLHDTVEDTDYSL 110
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ + FG+ VA LV+GV+KL ++ T +A+ + M +AMA D +LIK
Sbjct: 111 ERLRADFGSDVALLVDGVTKLDKV--------TYGAAAQAETVRKMVIAMAQDVNVLLIK 162
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHN T + R A+ETL+I+ PLA+RLG++T K +LE+L F L P +
Sbjct: 163 LADRLHNARTWRYVSPESSARKAQETLDIYAPLAHRLGMNTVKWELEDLSFAALKPKMYA 222
Query: 380 ELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
E+ + E E + + +E+ L++ I V GR K YSI+ KM+ + D
Sbjct: 223 EIVRLVGERNPEREKHIAALRTVIEEHLREHRIRATV-TGRPKHYYSIYQKMVTRGKDFD 281
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
+IHD+ G+R++V++ DCY L V+H W VPG+ KDYI PK N Y+SLHT V G
Sbjct: 282 DIHDLTGIRVLVDSVRDCYAVLGVIHARWNPVPGRFKDYIAVPKLNMYRSLHTTVMVPGG 341
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKD 555
P+E+QIRT+EMH QAE+G AAHWRYK V W R V+ WQ + D
Sbjct: 342 KPVEIQIRTQEMHRQAEYGVAAHWRYK-AQAAGQGPVQATPAWLRSVMDWQADTRDPD 398
>gi|319892687|ref|YP_004149562.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius HKU10-03]
gi|386319104|ref|YP_006015267.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
gi|317162383|gb|ADV05926.1| GTP pyrophosphokinase, (p)ppGpp synthetase I [Staphylococcus
pseudintermedius HKU10-03]
gi|323464275|gb|ADX76428.1| GTP pyrophosphokinase [Staphylococcus pseudintermedius ED99]
Length = 729
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK++L Q ++V+K+++ A +AH GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKQYLDKEQY-------EYVLKSYHIAYKAHEGQFRKNGLPYIMHPIQVAGILTEMHLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D ++D + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTPYTFDDVAEMFNVEIATIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLRAMPREKQIRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE++ ++++ Q+ + + K EA + +AIE + + + +I+ + GR
Sbjct: 183 IKWELEDIALRYIDNVQYFRIVNLMKKKRSEREAYIENAIENIRKEMDIMDIAGDI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + +DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMMKQKKQFDQIFDLLAVRVIVHSIKDCYAVLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTFEMHEIAEHGVAAHWAYKEG 349
>gi|375087257|ref|ZP_09733639.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
gi|374562074|gb|EHR33409.1| RelA/SpoT family protein [Megamonas funiformis YIT 11815]
Length = 740
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 143/358 (39%), Positives = 216/358 (60%), Gaps = 13/358 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ A AH Q R SG+ Y+ H + AM+L + + +AA LLHD ++D
Sbjct: 27 DLITKAYNLAYEAHADQKRISGEMYITHPLHVAMILTDLHIDEVTIAAALLHDVVEDTIY 86
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG VA L++GV+KLS++ ++E+ + + MFLAMA D R ++
Sbjct: 87 TIEQMKELFGEEVAMLIDGVTKLSKMKYKSKEDQ------QLETYRKMFLAMAKDIRVIM 140
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
IKLADRLHNM TL + K++R AKETLE++ PLANRLGIS K +LE+LC ++L P+
Sbjct: 141 IKLADRLHNMRTLKYMREEKQKRIAKETLEVYAPLANRLGISNIKWELEDLCLRYLEPET 200
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ +L K+ + +E + A+ K++Q ++ + GR K YSI+ KM K
Sbjct: 201 YYDLVDKVNQKREERQGFINDAVAKIQQEFDKIHLKGEI-KGRAKHFYSIYRKMKKSNKD 259
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
+ +I D+ +R++V+ DCY L ++H +W +PG+ KDYI PK NGYQSLHT V +
Sbjct: 260 ISDIFDLLAVRVLVQTIPDCYTVLGIIHAMWKPLPGRFKDYIAVPKTNGYQSLHTTVITD 319
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQH---SSFVLQMVEWARWVLTWQCE 550
+PLE+QIRT MH +E+G AAHW+YKE + +S + + W R ++T Q E
Sbjct: 320 NGLPLEIQIRTFAMHAISEYGIAAHWKYKEAGNKSIGANSEYDKKLSWLRQMITLQDE 377
>gi|254252971|ref|ZP_04946289.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
gi|124895580|gb|EAY69460.1| Guanosine polyphosphate pyrophosphohydrolase [Burkholderia dolosa
AUO158]
Length = 788
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 141/354 (39%), Positives = 213/354 (60%), Gaps = 10/354 (2%)
Query: 201 VIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSY 260
V AF+ ++ AH GQ R SG+PY+ H V A + A ++ V A LLHD ++D ++
Sbjct: 74 VKAAFHFSDEAHLGQYRQSGEPYITHPVAVAEICAGWKLDAQAVMAALLHDVMEDQGVTK 133
Query: 261 DYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIK 319
+ FG VA+LV+G+SKL ++ +RE +A+ M LAMA D R +L+K
Sbjct: 134 SELAERFGPKVAELVDGLSKLDKMEFRSREE------AQAENFRKMLLAMARDVRVILVK 187
Query: 320 LADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHT 379
LADRLHNM TL A+P+ KR+R A+ETL+I+ P+A+RLG++ +L+++ F + NP ++
Sbjct: 188 LADRLHNMRTLGAVPMEKRRRVARETLDIYAPIAHRLGLNNTYRELQDMSFANFNPHRYA 247
Query: 380 ELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMD 437
L K ++ +E ++A+ D I + GR K++YSI+ KM K+L+
Sbjct: 248 TLEKAVKAARGNRREVIGKILEAAQRAMTDAKIDAEI-TGREKTIYSIYRKMRDKQLSFS 306
Query: 438 EIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGL 497
++ D+YG R++V++ DCY + +H L+ VPGK KDYI PK NGYQSLHT + G
Sbjct: 307 QVLDVYGFRVVVDSPLDCYTCIGALHALYKPVPGKFKDYIAIPKINGYQSLHTTLVGPFG 366
Query: 498 VPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEA 551
P+E Q+RT++MH AE G AAHW YK G + + +W + +L Q EA
Sbjct: 367 APIEFQVRTRKMHEIAEAGVAAHWLYKNGGADLNDVQKRAHQWLKSLLDIQSEA 420
>gi|334337142|ref|YP_004542294.1| (p)ppGpp synthetase I SpoT/RelA [Isoptericola variabilis 225]
gi|334107510|gb|AEG44400.1| (p)ppGpp synthetase I, SpoT/RelA [Isoptericola variabilis 225]
Length = 777
Score = 271 bits (692), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 149/355 (41%), Positives = 208/355 (58%), Gaps = 24/355 (6%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AERAHRGQ R SGDPY+ H V A +LA +G + +AA LLHDT++D S D
Sbjct: 64 RAYETAERAHRGQQRKSGDPYITHPVAVATILAELGFDGATLAAALLHDTVEDTEYSLDQ 123
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG +A LV+GV+KL ++ T +A+ + M +AMA D R ++IKLA
Sbjct: 124 LREEFGDEIAMLVDGVTKLDKV--------TYGDAAQAETVRKMVVAMAKDIRVLVIKLA 175
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN T + +R A+ETLEI+ PLA+RLG++T K +LE+L F+ L P + E+
Sbjct: 176 DRLHNARTWKYVTSSSAERKARETLEIYAPLAHRLGMNTIKWELEDLSFQTLYPKVYDEI 235
Query: 382 SSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ E E + E++ L+ I V GR K YSI+ KM+ + EI
Sbjct: 236 VHLVAERAPAREEYLGVVREQITADLRSAKIKATV-TGRPKHYYSIYQKMIVRGHDFAEI 294
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
+D+ G R++V+ DCY AL +H W VPG+ KDYI PKFN YQSLHT V G G P
Sbjct: 295 YDLVGTRVLVDTVRDCYAALGALHARWNPVPGRFKDYIAMPKFNMYQSLHTTVVGPGGKP 354
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGD------------CQHSSFVLQMVEWAR 542
+E+QIRT +MH +AE+G AAHW+YKE +++ Q+V+W R
Sbjct: 355 VEIQIRTHDMHRRAEYGVAAHWKYKETSRGSKPGKSDDPRTNDMAWLRQLVDWQR 409
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,694,336,183
Number of Sequences: 23463169
Number of extensions: 436436502
Number of successful extensions: 1202037
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5645
Number of HSP's successfully gapped in prelim test: 1983
Number of HSP's that attempted gapping in prelim test: 1149409
Number of HSP's gapped (non-prelim): 31334
length of query: 703
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 553
effective length of database: 8,839,720,017
effective search space: 4888365169401
effective search space used: 4888365169401
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)