BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005297
(703 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P74007|SPOT_SYNY3 Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=spoT
PE=3 SV=1
Length = 760
Score = 290 bits (743), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 160/357 (44%), Positives = 222/357 (62%), Gaps = 12/357 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ +AF A H Q R SG+PY+ H V A LL +G + ++AAG LHD ++D +S
Sbjct: 53 LICRAFCFAYDLHAQQRRKSGEPYIAHPVAVAGLLRDLGGDEAMIAAGFLHDVVEDTDIS 112
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
+ I FG A LVEGV+KLS+ N +++ +A+ MFLAMA D R +++
Sbjct: 113 IEQIEALFGEETASLVEGVTKLSKF------NFSSTTEHQAENFRRMFLAMAKDIRVIVV 166
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TLDAL K++R A+ET +IF PLANRLGI +K +LE+L FK+L PD +
Sbjct: 167 KLADRLHNMRTLDALSPEKQRRIARETKDIFAPLANRLGIWRFKWELEDLSFKYLEPDSY 226
Query: 379 TELSSKLVECFD--EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++ S +VE E+ + + + L L+D+ I L GR K LY I+ KM +
Sbjct: 227 RKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHFELQGRPKHLYGIYYKMTSQDKAF 286
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+DI LR+IVE++ +CY+AL VVH ++ +PG+ KDYI PK N YQSLHT V G
Sbjct: 287 EEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLPKPNRYQSLHTTVLGLT 346
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVE---WARWVLTWQCE 550
PLE+QIRT+EMH AE+G AAHW+YKE ++ + E W R +L WQ +
Sbjct: 347 SRPLEIQIRTEEMHHVAEYGIAAHWKYKESGGSENATLTSTDEKFTWLRQLLDWQSD 403
>sp|O87331|RELA_CORGL GTP pyrophosphokinase OS=Corynebacterium glutamicum (strain ATCC
13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
GN=relA PE=3 SV=2
Length = 760
Score = 282 bits (721), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 154/355 (43%), Positives = 223/355 (62%), Gaps = 16/355 (4%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER H G +R SGDPY+ H + A + A IG ++T + A LLHDT++D S D
Sbjct: 57 RAYDTAERLHDGVIRKSGDPYITHPLAVATIAAEIGMDTTTLVAALLHDTVEDTDYSLDD 116
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG VA LV+GV+KL +++ A EA+ + M +AM+ D R ++IK+A
Sbjct: 117 LTRDFGEEVARLVDGVTKLDKVALGA--------AAEAETIRKMIVAMSQDPRVLVIKVA 168
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ + A++TLE+ PLA+RLG+++ K +LE+L F L P ++ E+
Sbjct: 169 DRLHNMRTMRFLPPEKQAKKARQTLEVIAPLAHRLGMASVKWELEDLSFAILYPKKYEEI 228
Query: 382 SSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
+ + + + I+++ L++ NI+ VL GR K +SI+ KM+ + D+I
Sbjct: 229 VRLVADRAPSRDRYLKEIIDQVTGGLRENNIAAEVL-GRPKHYWSIYQKMIVRGRDFDDI 287
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
D+ G+R++V+N +CY A+ VVH L+ +PG+ KDYI+ P+F YQSLHT V G G P
Sbjct: 288 FDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAPRFGVYQSLHTTVMGPGGKP 347
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHS---SFVLQMVEWARWVLTWQCEA 551
LEVQ RT +MH AEFG AAHWRYKE HS + V QM W R +L WQ EA
Sbjct: 348 LEVQARTHDMHYNAEFGIAAHWRYKETKGSHSGEQAEVDQMA-WMRQLLDWQKEA 401
>sp|O54408|RELA_BACSU GTP pyrophosphokinase OS=Bacillus subtilis (strain 168) GN=relA
PE=3 SV=3
Length = 734
Score = 277 bits (708), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/356 (41%), Positives = 217/356 (60%), Gaps = 11/356 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA+ AE AHR Q R SG+PY++H ++ A +L + + + +A G LHD ++D ++
Sbjct: 27 FVEKAYLYAEDAHREQYRKSGEPYIIHPIQVAGILVDLEMDPSTIAGGFLHDVVEDTDVT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D + F VA LV+GV+KL ++ ++E +A+ MF+AMA D R +LI
Sbjct: 87 LDDLKEAFSEEVAMLVDGVTKLGKIKYKSQEEQ------QAENHRKMFVAMAQDIRVILI 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL LP K++R + ETLEIF PLA+RLGIS K +LE+ ++LNP Q+
Sbjct: 141 KLADRLHNMRTLKHLPQEKQRRISNETLEIFAPLAHRLGISKIKWELEDTALRYLNPQQY 200
Query: 379 TELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ + K E V + ++++ +++ NI GR K +YSI+ KM+ +
Sbjct: 201 YRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIK-ADFSGRPKHIYSIYRKMVLQNKQF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+EI+D+ +R++V + +DCY L ++H W +PG+ KDYI PK N YQSLHT V G
Sbjct: 260 NEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMPKPNMYQSLHTTVIGPK 319
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQ-MVEWARWVLTWQCEA 551
PLEVQIRT EMH AE+G AAHW YKEG + + + W R +L +Q E+
Sbjct: 320 GDPLEVQIRTFEMHEIAEYGVAAHWAYKEGKAANEGATFEKKLSWFREILEFQNES 375
>sp|Q8CS97|RELA_STAES GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=relA PE=3 SV=1
Length = 729
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>sp|Q5HNR8|RELA_STAEQ GTP pyrophosphokinase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=relA PE=3 SV=1
Length = 729
Score = 273 bits (699), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 142/348 (40%), Positives = 218/348 (62%), Gaps = 17/348 (4%)
Query: 182 AKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANS 241
AK +L+ ++ ++V+K+++ A AH+GQ R +G PY++H ++ A +L + +
Sbjct: 16 AKSYLSTSEY-------EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDG 68
Query: 242 TVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEAD 301
+ AG LHD ++D +++ + F +A +V+GV+KL ++ ++E +A+
Sbjct: 69 PTIVAGFLHDVIEDTSYTFEDVKDMFNEEIARIVDGVTKLKKVKYRSKEEQ------QAE 122
Query: 302 RLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGIST 360
+F+A+A D R +L+KLADRLHNM TL A+P K+ R +KETLEI+ PLA+RLGI+T
Sbjct: 123 NHRKLFIAIAKDVRVILVKLADRLHNMRTLKAMPREKQVRISKETLEIYAPLAHRLGINT 182
Query: 361 WKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGR 418
K +LE+ ++++ Q+ + + K EA +T+AI K++ + N+S + GR
Sbjct: 183 IKWELEDTALRYIDSVQYFRIVNLMKKKRSEREAYITNAINKIKNEMTKMNLSGEI-NGR 241
Query: 419 HKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYIT 478
K +YSI+ KM+K+K D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI
Sbjct: 242 PKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVNSINDCYATLGLVHTLWKPMPGRFKDYIA 301
Query: 479 RPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PK N YQSLHT V G PLE+QIRT EMH AE G AAHW YKEG
Sbjct: 302 MPKQNMYQSLHTTVVGPNGDPLEIQIRTHEMHEIAEHGVAAHWAYKEG 349
>sp|O52177|RELA_MYXXA GTP pyrophosphokinase OS=Myxococcus xanthus GN=relA PE=3 SV=1
Length = 757
Score = 272 bits (696), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 144/351 (41%), Positives = 215/351 (61%), Gaps = 13/351 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
D + KA+ + + H+GQ+R SG+PYL+H +E A +L + + + GLLHDT++D
Sbjct: 39 DIIKKAYVYSAKVHQGQLRKSGEPYLVHPLEVAGILGELKLDEASIVTGLLHDTIEDTLA 98
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+ + + FG+ VA LV+GV+KLS+ S A + + + +A+ M +AMA D R +L
Sbjct: 99 TEEELTELFGSEVAHLVDGVTKLSKFSASA---SLSQEEKQAENFRKMIIAMAQDIRVIL 155
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADR HNM TLD + K+ R A+ETL+I+ PLANRLGIS K +LE+L F+++ P +
Sbjct: 156 VKLADRTHNMRTLDHMSEEKQARIAQETLDIYAPLANRLGISWIKTELEDLSFRYVKPQE 215
Query: 378 HTELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
L +KL + E + + + L ++ + V GR K +YSI+ K+ + +
Sbjct: 216 FFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLKGEV-SGRFKHVYSIYKKIKSQGID 274
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+IHDI R+I CY+AL +VH++W VPG+ KD+I PK N YQSLHT + G
Sbjct: 275 FDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIPKPNMYQSLHTTIIGP 334
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG------DCQHSSFVLQMVEW 540
+EVQIRT EMH AE G AAHW+YKEG D + +++ Q++EW
Sbjct: 335 LSERVEVQIRTSEMHKIAEEGIAAHWKYKEGKAVISKDDEKFAWLRQLMEW 385
>sp|P52560|RELA_STRCO GTP pyrophosphokinase OS=Streptomyces coelicolor (strain ATCC
BAA-471 / A3(2) / M145) GN=relA PE=3 SV=1
Length = 847
Score = 271 bits (692), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/369 (41%), Positives = 218/369 (59%), Gaps = 33/369 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHDT++D +
Sbjct: 129 RAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDTVEDTEYGLED 188
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 189 LRRDFGDVVTLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 240
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 241 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 300
Query: 382 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++Q L+ I V GR K YS++ KM+ +
Sbjct: 301 VRLVAERAPKRDEYLAVVT---DEVQQDLRAARIKATV-TGRPKHYYSVYQKMIVRGRDF 356
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G G
Sbjct: 357 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPG 416
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV---------------LQMVEWA 541
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W
Sbjct: 417 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVAGASKVRTDAPKSSGKSKDDHLNDMAWL 476
Query: 542 RWVLTWQCE 550
R +L WQ E
Sbjct: 477 RQLLDWQKE 485
>sp|O85709|RELA_STRAT GTP pyrophosphokinase OS=Streptomyces antibioticus GN=relA PE=3
SV=1
Length = 841
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/368 (41%), Positives = 216/368 (58%), Gaps = 32/368 (8%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AER HRGQ R SGDPY+ H + +LA +G + + AGLLHD+ +D D
Sbjct: 126 KAYQVAERWHRGQKRKSGDPYITHPLAVTTILAELGMDPATLMAGLLHDSREDTEYGLDD 185
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ R FG V LV+GV+KL ++ + +A+ + M +AMA D R ++IKLA
Sbjct: 186 LRRDFGDVVGLLVDGVTKLDKVK--------FGEAAQAETVRKMVVAMAKDPRVLVIKLA 237
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ L K+++ A+ETLEI+ PLA+RLG++T K +LE+L F L P + E+
Sbjct: 238 DRLHNMRTMRYLKREKQEKKARETLEIYAPLAHRLGMNTIKWELEDLAFAILYPKMYDEI 297
Query: 382 SSKLVE---CFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
+ E DE A+VT ++++ L+ + I V GR K YS++ K++ +
Sbjct: 298 VRLVAERAPKRDEYLAIVT---DEVQSDLRARRIKATV-TGRPKHYYSVYQKIIVRGRDF 353
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
EI+D+ G+R++V+ DCY AL VH W VPG+ KDYI PKFN YQSLHT V G
Sbjct: 354 AEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMPKFNMYQSLHTTVIGPN 413
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFV--------------LQMVEWAR 542
P+E+QIRT +MH +AE+G AAHW+YK+ +S V L + W R
Sbjct: 414 GKPVELQIRTFDMHRRAEYGIAAHWKYKQEAVARASKVRTDVPKPAKGKDDHLNDMAWLR 473
Query: 543 WVLTWQCE 550
+L WQ E
Sbjct: 474 QLLDWQKE 481
>sp|P0A0E9|RELA_STAAW GTP pyrophosphokinase OS=Staphylococcus aureus (strain MW2) GN=relA
PE=3 SV=1
Length = 736
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|P0A0F0|RELA_STAAU GTP pyrophosphokinase OS=Staphylococcus aureus GN=relA PE=3 SV=1
Length = 736
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|Q6G8T5|RELA_STAAS GTP pyrophosphokinase OS=Staphylococcus aureus (strain MSSA476)
GN=relA PE=3 SV=1
Length = 736
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|Q6GG70|RELA_STAAR GTP pyrophosphokinase OS=Staphylococcus aureus (strain MRSA252)
GN=relA PE=3 SV=1
Length = 736
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|Q99TL8|RELA_STAAN GTP pyrophosphokinase OS=Staphylococcus aureus (strain N315)
GN=relA PE=1 SV=2
Length = 736
Score = 265 bits (677), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 136/331 (41%), Positives = 209/331 (63%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+RLGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHRLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|Q49640|RELA_MYCLE Probable GTP pyrophosphokinase OS=Mycobacterium leprae (strain TN)
GN=relA PE=3 SV=1
Length = 787
Score = 264 bits (675), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/387 (38%), Positives = 218/387 (56%), Gaps = 43/387 (11%)
Query: 183 KEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANST 242
KEF A L V +AF A++ H Q+R SGDPY+ H + A +LA +G + T
Sbjct: 69 KEFYPKANLS-------IVQRAFEVADQRHASQLRRSGDPYITHPLAVANILAELGMDIT 121
Query: 243 VVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADR 302
+ A LLHDT++D + + + FG V LV+GV+KL ++ E +
Sbjct: 122 TLVAALLHDTVEDTGYTLEALSEEFGDEVGHLVDGVTKLDRV--------VLGSAAEGET 173
Query: 303 LHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTW 361
+ M AMA D R ++IK+ADRLHNM T+ LP K+ R A+ETLE+ PLA+RLG+++
Sbjct: 174 IRKMITAMARDPRVLVIKVADRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASV 233
Query: 362 KVQLENLCFKHLNPDQHTEL-----------SSKLVECFDEAMVTSAIEKLEQALKDKNI 410
K +LE+L F L+P ++ E+ + L + E + T K++ ++
Sbjct: 234 KWELEDLSFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVE---- 289
Query: 411 SFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVP 470
GR K +SI+ KM+ K D+IHD+ G+R++ + DCY A+ VVH LW +
Sbjct: 290 ------GRPKHYWSIYQKMIVKGRDFDDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMA 343
Query: 471 GKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ- 529
G+ KDYI +P++ YQSLHT V G PLEVQIRT++MH AE+G AAHWRYKE +
Sbjct: 344 GRFKDYIAQPRYGVYQSLHTTVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRN 403
Query: 530 -----HSSFVLQMVEWARWVLTWQCEA 551
H++ + + W R +L WQ EA
Sbjct: 404 GVLHPHAAAEIDDMAWMRQLLDWQREA 430
>sp|P0AG26|SPOT_SHIFL Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Shigella flexneri GN=spoT PE=3 SV=1
Length = 702
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 209/354 (59%), Gaps = 10/354 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA+LVEGVSKL +L + K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKLKFRDK------KEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIY R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP
Sbjct: 258 MDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVP 317
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S
Sbjct: 318 VEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
>sp|P0AG24|SPOT_ECOLI Bifunctional (p)ppGpp synthase/hydrolase SpoT OS=Escherichia coli
(strain K12) GN=spoT PE=1 SV=1
Length = 702
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 209/354 (59%), Gaps = 10/354 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA+LVEGVSKL +L + K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKLKFRDK------KEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIY R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP
Sbjct: 258 MDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVP 317
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S
Sbjct: 318 VEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
>sp|P0AG25|SPOT_ECO57 Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Escherichia coli O157:H7 GN=spoT PE=3 SV=1
Length = 702
Score = 263 bits (672), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/354 (42%), Positives = 209/354 (59%), Gaps = 10/354 (2%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A AH GQ R+SG+PY+ H V A +LA + + + A LLHD ++D +Y
Sbjct: 25 QAYLVARDAHEGQTRSSGEPYITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQD 84
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ + FG VA+LVEGVSKL +L + K +A+ M +AM D R +LIKLA
Sbjct: 85 MEQLFGKSVAELVEGVSKLDKLKFRDK------KEAQAENFRKMIMAMVQDIRVILIKLA 138
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DR HNM TL +L KR+R A+ETLEI+ PLA+RLGI K +LE L F+ L P+++ +
Sbjct: 139 DRTHNMRTLGSLRPDKRRRIARETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVI 198
Query: 382 SS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEI 439
K + M+ + ++E L++ I V GR K LYSI+CKM+ K+ I
Sbjct: 199 KEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCRV-SGREKHLYSIYCKMVLKEQRFHSI 257
Query: 440 HDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVP 499
DIY R+IV + + CY+ L +H L+ PG++KDYI PK NGYQSLHT + G VP
Sbjct: 258 MDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVP 317
Query: 500 LEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMS 553
+EVQIRT++M AE G AAHW YKE ++ ++ W + +L Q A S
Sbjct: 318 VEVQIRTEDMDQMAEMGVAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGS 371
>sp|Q931Q4|RELA_STAAM GTP pyrophosphokinase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=relA PE=3 SV=2
Length = 736
Score = 262 bits (670), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 208/331 (62%), Gaps = 10/331 (3%)
Query: 199 DFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFL 258
++V+K+++ A AH+GQ R +G PY++H ++ A +L + + + AG LHD ++D
Sbjct: 33 EYVLKSYHIAYEAHKGQFRKNGLPYIMHPIQVAGILTEMRLDGPTIVAGFLHDVIEDTPY 92
Query: 259 SYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVL 317
+++ + F VA +V+GV+KL ++ ++E +A+ +F+A+A D R +L
Sbjct: 93 TFEDVKEMFNEEVARIVDGVTKLKKVKYRSKEEQ------QAENHRKLFIAIAKDVRVIL 146
Query: 318 IKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQ 377
+KLADRLHNM TL A+P K+ R ++ETLEI+ PLA+ LGI+T K +LE+ ++++ Q
Sbjct: 147 VKLADRLHNMRTLKAMPREKQIRISRETLEIYAPLAHHLGINTIKWELEDTALRYIDNVQ 206
Query: 378 HTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLT 435
+ + + K EA + +AI+++ + NI + GR K +YSI+ KM+K+K
Sbjct: 207 YFRIVNLMKKKRSEREAYIETAIDRIRTEMDRMNIEGDI-NGRPKHIYSIYRKMMKQKKQ 265
Query: 436 MDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGE 495
D+I D+ +R+IV + DCY L +VH LW +PG+ KDYI PK N YQSLHT V G
Sbjct: 266 FDQIFDLLAIRVIVNSINDCYAILGLVHTLWKPMPGRFKDYIAMPKQNLYQSLHTTVVGP 325
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
PLE+QIRT +MH AE G AAHW YKEG
Sbjct: 326 NGDPLEIQIRTFDMHEIAEHGVAAHWAYKEG 356
>sp|P66015|RELA_MYCBO Probable GTP pyrophosphokinase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=relA PE=3 SV=1
Length = 790
Score = 262 bits (669), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 213/367 (58%), Gaps = 36/367 (9%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A++ H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 85 RAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEA 144
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V LV+GV+KL ++ E + + M AMA D R ++IK+A
Sbjct: 145 LTEEFGEEVGHLVDGVTKLDRV--------VLGSAAEGETIRKMITAMARDPRVLVIKVA 196
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++ E+
Sbjct: 197 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEI 256
Query: 382 -----------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ L + E + T K++ ++ GR K +SI+ KM+
Sbjct: 257 VRLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVE----------GRPKHYWSIYQKMI 306
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT
Sbjct: 307 VKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHT 366
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWV 544
V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +
Sbjct: 367 TVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQL 426
Query: 545 LTWQCEA 551
L WQ EA
Sbjct: 427 LDWQREA 433
>sp|P66014|RELA_MYCTU Bifunctional (p)ppGpp synthase/hydrolase relA OS=Mycobacterium
tuberculosis GN=relA PE=1 SV=2
Length = 738
Score = 261 bits (666), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 142/367 (38%), Positives = 213/367 (58%), Gaps = 36/367 (9%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A++ H Q+R SGDPY+ H + A +LA +G ++T + A LLHDT++D + +
Sbjct: 33 RAYEVADQRHASQLRQSGDPYITHPLAVANILAELGMDTTTLVAALLHDTVEDTGYTLEA 92
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG V LV+GV+KL ++ E + + M AMA D R ++IK+A
Sbjct: 93 LTEEFGEEVGHLVDGVTKLDRV--------VLGSAAEGETIRKMITAMARDPRVLVIKVA 144
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHNM T+ LP K+ R A+ETLE+ PLA+RLG+++ K +LE+L F L+P ++ E+
Sbjct: 145 DRLHNMRTMRFLPPEKQARKARETLEVIAPLAHRLGMASVKWELEDLSFAILHPKKYEEI 204
Query: 382 -----------SSKLVECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKML 430
+ L + E + T K++ ++ GR K +SI+ KM+
Sbjct: 205 VRLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVE----------GRPKHYWSIYQKMI 254
Query: 431 KKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHT 490
K D+IHD+ G+R++ + DCY A+ VVH LW + G+ KDYI +P++ YQSLHT
Sbjct: 255 VKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQPRYGVYQSLHT 314
Query: 491 VVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQ------HSSFVLQMVEWARWV 544
V G PLEVQIRT++MH AE+G AAHWRYKE + H++ + + W R +
Sbjct: 315 TVVGPEGKPLEVQIRTRDMHRTAEYGIAAHWRYKEAKGRNGVLHPHAAAEIDDMAWMRQL 374
Query: 545 LTWQCEA 551
L WQ EA
Sbjct: 375 LDWQREA 381
>sp|Q54089|RELA_STREQ Bifunctional (p)ppGpp synthase/hydrolase RelA OS=Streptococcus
dysgalactiae subsp. equisimilis GN=relA PE=1 SV=1
Length = 739
Score = 260 bits (665), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/331 (42%), Positives = 208/331 (62%), Gaps = 13/331 (3%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
FV KA A AH Q+R SG+PY++H ++ A +LA + ++ VA G LHD ++D ++
Sbjct: 27 FVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVEDTDIT 86
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLI 318
D I FG V D+V+GV+KL ++ + E A + M +AM+ D R +L+
Sbjct: 87 LDNIEFDFGKDVRDIVDGVTKLGKVEYKSHEEQLA------ENHRKMLMAMSKDIRVILV 140
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRLHNM TL L K++R ++ET+EI+ PLA+RLGIS K +LE+L F++LN +
Sbjct: 141 KLADRLHNMRTLKHLRKDKQERISRETMEIYAPLAHRLGISRIKWELEDLAFRYLNETEF 200
Query: 379 TELSSKLVECFDE--AMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
++S + E E A+V + K++ ++ + F + GR K +YSI+ KM KK
Sbjct: 201 YKISHMMNEKRREREALVDDIVTKIKSYTTEQGL-FGDVYGRPKHIYSIYRKMRDKKKRF 259
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTG-E 495
D+I D+ +R ++E + D Y + +H+LW +PG+ KDYI PK NGYQS+HT V G +
Sbjct: 260 DQIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRFKDYIAAPKANGYQSIHTTVYGPK 319
Query: 496 GLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG 526
G P+E+QIRTKEMH AE+G AAHW YK+G
Sbjct: 320 G--PIEIQIRTKEMHQVAEYGVAAHWAYKKG 348
>sp|Q8YG65|RSH_BRUME GTP pyrophosphokinase rsh OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rsh PE=1 SV=2
Length = 750
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 133/346 (38%), Positives = 206/346 (59%), Gaps = 12/346 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + Q E + KA+ A + HR Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHRSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRH 419
+LE L F+++NPD ++ +L E ++ ++K+E L + KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +S+ KM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMESKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+
Sbjct: 298 PKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343
>sp|Q9KNM2|SPOT_VIBCH Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Vibrio
cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba
N16961) GN=spoT PE=1 SV=1
Length = 705
Score = 248 bits (634), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 148/371 (39%), Positives = 217/371 (58%), Gaps = 19/371 (5%)
Query: 177 NLETYAKEFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAA 236
+L+ A+E+L Q++ R+ +V+ A AH GQ R+SG+PY++H V A +LA
Sbjct: 6 SLKDVAQEYLTEPQIE--ALRQSYVV-----ARDAHEGQTRSSGEPYIIHPVAVARILAE 58
Query: 237 IGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASK 296
+ + + A LLHD ++D ++ + + FG+ VA+LV+GVSKL +L R K
Sbjct: 59 MRLDLETLQAALLHDVIEDCDVTKEDLDAHFGSSVAELVDGVSKLDKLKFRDR------K 112
Query: 297 TVEADRLHTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANR 355
+A+ M LAM D R +LIKLADR NM TL AL K++R A+ETLEI+ PLA+R
Sbjct: 113 EAQAENFRKMVLAMVQDIRVILIKLADRTPNMRTLGALRPDKKRRIARETLEIYAPLAHR 172
Query: 356 LGISTWKVQLENLCFKHLNPDQHTELSS--KLVECFDEAMVTSAIEKLEQALKDKNISFL 413
LGI K +LE L F+ L P+++ L K + M+ ++E L++ +
Sbjct: 173 LGIHNIKTELEELGFEALYPNRYRVLKEVVKAARGNRKEMIQRIHSEIEGRLQEVGLPAR 232
Query: 414 VLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKM 473
V+ GR K+L+SI+ KM K+ I DIY R++V+ + CY+ L VH L+ P +M
Sbjct: 233 VV-GREKNLFSIYNKMKTKEQRFHTIMDIYAFRIVVDTADTCYRVLGQVHSLYKPRPARM 291
Query: 474 KDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEGDCQHSSF 533
KDYI PK NGYQSLHT + G VP+EVQIRT++M A+ G AAHW YK + +
Sbjct: 292 KDYIAVPKANGYQSLHTSMVGPHGVPVEVQIRTEDMDQMADKGVAAHWSYK-ANSERGGT 350
Query: 534 VLQMVEWARWV 544
Q ++ RW+
Sbjct: 351 TAQ-IKAQRWM 360
>sp|P43811|SPOT_HAEIN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121
/ KW20 / Rd) GN=spoT PE=3 SV=1
Length = 677
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 147/358 (41%), Positives = 207/358 (57%), Gaps = 19/358 (5%)
Query: 208 AERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
A AH GQ R+SG+PY+ H V A ++A + + V A LLHD ++D + + + F
Sbjct: 3 ARDAHEGQFRSSGEPYITHPVAVASIIAQLHLDHEAVMAALLHDVIEDTPYTEEQLKEEF 62
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLADRLHN 326
GA VA++V+GVSKL +L R+ + + M LAM D R VLIKLADR HN
Sbjct: 63 GASVAEIVDGVSKLDKLKFRTRQE------AQVENFRKMILAMTRDIRVVLIKLADRTHN 116
Query: 327 MMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 386
M TL +L KR+R AKETLEI+ PLA+RLGI K +LE+L F+ ++P ++ E+ KLV
Sbjct: 117 MRTLGSLRPDKRRRIAKETLEIYCPLAHRLGIEHIKNELEDLSFQAMHPHRY-EVLKKLV 175
Query: 387 ECFDEAMVTSAIEKLEQALK---DKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIY 443
+ + IE++ Q +K + + F + GR K LY I+ KM K I DIY
Sbjct: 176 DV-ARSNRQDLIERISQEIKVRLENSGIFARVWGREKHLYKIYQKMRIKDQEFHSIMDIY 234
Query: 444 GLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQ 503
R+IV+N +DCY+ L +H L+ PG++KDYI PK NGYQSL T + G VP+EV
Sbjct: 235 AFRVIVKNVDDCYRVLGQMHNLYKPRPGRVKDYIAVPKANGYQSLQTSMIGPKGVPVEVH 294
Query: 504 IRTKEMHLQAEFGFAAHWRYKEGDCQHSSFVLQMVEWARWVLTWQCEAMSKDRSCVGN 561
I T++M AE G AHW YKE S+ + RW+ +++ + + VGN
Sbjct: 295 IHTEDMEQVAEMGITAHWVYKENGKNDSTTA--QIRVQRWL-----QSLVEIQQSVGN 345
>sp|Q57E90|RSH_BRUAB GTP pyrophosphokinase rsh OS=Brucella abortus biovar 1 (strain
9-941) GN=rsh PE=1 SV=1
Length = 750
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRH 419
+LE L F+++NPD ++ +L E ++ ++K+E L + KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +S+ KM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+
Sbjct: 298 PKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343
>sp|Q2YN11|RSH_BRUA2 GTP pyrophosphokinase rsh OS=Brucella abortus (strain 2308) GN=rsh
PE=3 SV=1
Length = 750
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRH 419
+LE L F+++NPD ++ +L E ++ ++K+E L + KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +S+ KM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+
Sbjct: 298 PKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343
>sp|A5VPI9|RSH_BRUO2 GTP pyrophosphokinase rsh OS=Brucella ovis (strain ATCC 25840 /
63/290 / NCTC 10512) GN=rsh PE=3 SV=1
Length = 750
Score = 247 bits (631), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMREDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRH 419
+LE L F+++NPD ++ +L E ++ ++K+E L + KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +S+ KM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+
Sbjct: 298 PKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343
>sp|Q8CY42|RSH_BRUSU GTP pyrophosphokinase rsh OS=Brucella suis biovar 1 (strain 1330)
GN=rsh PE=1 SV=1
Length = 750
Score = 246 bits (628), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 132/346 (38%), Positives = 205/346 (59%), Gaps = 12/346 (3%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
E + Q E + KA+ A + H Q RASGDPY H +E A +L + +
Sbjct: 6 ELVERVQRYKPDVNEALLNKAYVYAMQKHGSQKRASGDPYFSHPLEVAAILTDMHLDEAT 65
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+A LLHDT++D + I + FG + LVEG++KL +L +++ K V+A+ L
Sbjct: 66 IAIALLHDTIEDTTATRQEIDQLFGPEIGKLVEGLTKLKKLDLVSK------KAVQAENL 119
Query: 304 HTMFLAMA-DARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ LA++ D R +L+KLADRLHNM TL + KR R A+ET++I+ PLA R+G+ +
Sbjct: 120 RKLLLAISEDVRVLLVKLADRLHNMRTLGVMCEDKRLRIAEETMDIYAPLAGRMGMQDMR 179
Query: 363 VQLENLCFKHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKD---KNISFLVLCGRH 419
+LE L F+++NPD ++ +L E ++ ++K+E L + KN + R
Sbjct: 180 EELEELAFRYINPDAWRAVTDRLAELLEKN--RGLLQKIETDLSEIFEKNGIKASVKSRQ 237
Query: 420 KSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITR 479
K +S+ KM K L+ +++ DI+G R++V+ +DCY+AL ++H W+ VPG+ KDYI+
Sbjct: 238 KKPWSVFRKMETKGLSFEQLSDIFGFRVMVDTVQDCYRALGLIHTTWSMVPGRFKDYIST 297
Query: 480 PKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
PK N Y+S+HT + G +E+QIRT+EM AEFG AAH YK+
Sbjct: 298 PKQNDYRSIHTTIIGPSRQRIELQIRTREMDEIAEFGVAAHSIYKD 343
>sp|O34098|SPOT_SPICI Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Spiroplasma citri GN=spoT PE=3 SV=1
Length = 749
Score = 243 bits (620), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 135/329 (41%), Positives = 203/329 (61%), Gaps = 11/329 (3%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
KA+ AE H GQ+R SG Y++H + T LA + AGLLHD L+D +++
Sbjct: 29 KAYEYAEEKHHGQVRNSGARYIIHPLWTTFFLAQWRMGPKTLIAGLLHDVLEDTPATFEE 88
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
+ FG +A+LVEGV+K+S A+EN T ++A L ++L+MA D R +++KLA
Sbjct: 89 LQELFGIEIANLVEGVTKVSYF---AKENRTQ---IKAQYLRKLYLSMAKDIRVIIVKLA 142
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRLHN+ T+ L ++Q A+E+LEI+ +A+RLG+ K ++E++ FK +NP Q+ ++
Sbjct: 143 DRLHNLKTIGYLKPERQQIIARESLEIYSAIAHRLGMKAVKQEIEDISFKIINPVQYNKI 202
Query: 382 SSKLVECFD---EAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
S L+E + E + IE+L++ L + + + GR KS+YSI+ KM + D+
Sbjct: 203 VS-LLESSNKERENTINQKIEELKKILITEKKMSVKVYGRSKSIYSIYRKMNQFGKNFDD 261
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
IHDI +R+I + +DCY+ L VHQ + + + KDYI PK N YQSLHT + + +
Sbjct: 262 IHDILAVRIITNSVDDCYKVLGFVHQHYTPLNNRFKDYIATPKHNLYQSLHTTIVADDGL 321
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEGD 527
EVQIRT+EM AE G AAHWRYKEG+
Sbjct: 322 IFEVQIRTEEMDELAEQGVAAHWRYKEGE 350
>sp|O51216|SPOT_BORBU Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Borrelia burgdorferi (strain ATCC 35210 / B31 / CIP
102532 / DSM 4680) GN=spoT PE=3 SV=1
Length = 667
Score = 242 bits (617), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 135/354 (38%), Positives = 199/354 (56%), Gaps = 14/354 (3%)
Query: 196 FREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDD 255
F + KA AE+ H GQ R SG+PY++H + ++ LA + AGLLHD L+D
Sbjct: 35 FERKSIFKALEIAEQLHYGQYRESGEPYIIHPIMVSLFLAKFQLDFKATIAGLLHDVLED 94
Query: 256 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DAR 314
+ + I + F + L++GV+K+ L +N EA+ + MF AM D R
Sbjct: 95 TNVEKEEIVKEFDEEILSLIDGVTKIHDL------HNKTRSIKEANTISKMFFAMTHDIR 148
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLN 374
++IKLAD+LHNM TL LP ++ R AK+ L +VP+A RLGIS+ K LE+L FKHL
Sbjct: 149 IIIIKLADKLHNMTTLSYLPKNRQDRIAKDCLSTYVPIAERLGISSLKTYLEDLSFKHLY 208
Query: 375 PDQHTELSSKLVECF--DEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKK 432
P + E+ + L E E + +E+ L+ I + R K YSI KM +
Sbjct: 209 PKDYKEIKNFLSETKIEREKKLYKGKLSIEKELQKSGIEAEITV-RSKHFYSIFRKMQTR 267
Query: 433 KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVV 492
+ +I D G+R+I + +++CY+ L +VH++W +PG++KDYI PK N YQSLHT V
Sbjct: 268 TNKLTQIFDTLGIRIICKKQKECYEILEIVHRVWKPIPGRLKDYIASPKENKYQSLHTTV 327
Query: 493 -TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKEG---DCQHSSFVLQMVEWAR 542
E +E+QIRT+EM A +G AAHW YKE SF+ ++ +W +
Sbjct: 328 RIPEDNQLIEIQIRTEEMDRIANYGVAAHWIYKEQIELKADDLSFINRIKKWQQ 381
>sp|O67012|SPOT_AQUAE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase OS=Aquifex
aeolicus (strain VF5) GN=spoT PE=3 SV=1
Length = 696
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 135/345 (39%), Positives = 206/345 (59%), Gaps = 18/345 (5%)
Query: 203 KAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDY 262
+A+ A+ H Q R +G+PY++H + A+ LA +G + + A LLHDTL+D +Y+
Sbjct: 29 RAYEFAKEKHGEQKRKTGEPYIIHPLNVALKLAELGMDHETIIAALLHDTLEDTDTTYEE 88
Query: 263 IFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMA-DARAVLIKLA 321
I FG VA LVEGV+K+ ++ K+ +A+ + LA A D R +L+KL+
Sbjct: 89 IKERFGERVAKLVEGVTKIGKIK---------YKSEQAENYRKLILATAEDPRVILLKLS 139
Query: 322 DRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTEL 381
DRL N+ TL KR++ AKET+EI+ PLA+RLG+ + K +LE+ FK+L P+++ ++
Sbjct: 140 DRLDNVKTLWVFREEKRKKIAKETMEIYAPLAHRLGVWSIKNELEDWAFKYLYPEEYEKV 199
Query: 382 SSKLVEC---FDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDE 438
+ + E +E + I K+ + L+ I + R K YSI K +K + +++
Sbjct: 200 RNFVKESRKNLEEYLRKYVIPKVRKELEKYGIEAEIKY-RSKHYYSIWEKTRRKGIRLED 258
Query: 439 IHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLV 498
+HDI G+R+IV +CY L ++H L+ VPGK KDYI+ PK N YQSLHT V +
Sbjct: 259 VHDILGVRIIVNTVPECYTVLGIIHSLFRPVPGKFKDYISLPKPNLYQSLHTTVIADKGK 318
Query: 499 PLEVQIRTKEMHLQAEFGFAAHWRYKEG----DCQHSSFVLQMVE 539
+E QIRT EMH +AE G A+HW YKEG D S++ ++VE
Sbjct: 319 LVEFQIRTWEMHERAEKGIASHWAYKEGKNPSDAGVYSWLRELVE 363
>sp|P55133|RELA_PHOAS GTP pyrophosphokinase OS=Photobacterium angustum (strain S14 / CCUG
15956) GN=relA PE=3 SV=1
Length = 744
Score = 210 bits (535), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 183/327 (55%), Gaps = 6/327 (1%)
Query: 229 ETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLA 288
E +L + ++ + A LL+ ++ S D + + + LV+GV ++ +S+L
Sbjct: 60 ELVEILVTLSMDADTLIAALLYPLVEGGCYSTDALKEEYSGTILHLVQGVEQMCAISQLK 119
Query: 289 RENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFAKETLE 347
++ + D + M L+M D R V+IKLA+R+ N+ + P R+ A+E
Sbjct: 120 STAEETAQAAQVDNIRRMLLSMVDDFRCVVIKLAERICNLREVKDQPDEVRRAAAQECAN 179
Query: 348 IFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKLEQAL 405
I+ PLANRLGI K ++E+ F++ +PD + +++ +L E E +T ++ L A+
Sbjct: 180 IYAPLANRLGIGQLKWEIEDYAFRYQHPDTYKQIAKQLSERRIDREDYITHFVDDLSDAM 239
Query: 406 KDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQL 465
K NI V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL VVH
Sbjct: 240 KASNIRAEVQ-GRPKHIYSIWRKMQKKSLEFDELFDVRAVRIVAEELQDCYAALGVVHTK 298
Query: 466 WAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
+ +P + DY+ PK NGYQS+HTVV G +E+QIRTK+MH ++E G AAHW+YKE
Sbjct: 299 YRHLPKEFDDYVANPKPNGYQSIHTVVLGPEGKTIEIQIRTKQMHEESELGVAAHWKYKE 358
Query: 526 GDCQ--HSSFVLQMVEWARWVLTWQCE 550
G S + + W R +L WQ E
Sbjct: 359 GTASGGAQSAYDEKINWLRKLLAWQEE 385
>sp|P0AG23|RELA_SHIFL GTP pyrophosphokinase OS=Shigella flexneri GN=relA PE=3 SV=1
Length = 744
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
Query: 224 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 283
L VE +L+ + + + A LL D +S D + + G V +L+ GV ++
Sbjct: 56 LWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAA 115
Query: 284 LSKLARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFA 342
+ +L + + + + D + M LAM D R V+IKLA+R+ ++ + P +R A
Sbjct: 116 IRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAA 175
Query: 343 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEK 400
KE I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E E + +
Sbjct: 176 KECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGH 235
Query: 401 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 460
L +K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL
Sbjct: 236 LRAEMKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALG 294
Query: 461 VVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAH 520
+VH + +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAH
Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAH 354
Query: 521 WRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 550
W+YKEG S + W R ++ WQ E
Sbjct: 355 WKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
>sp|P0AG20|RELA_ECOLI GTP pyrophosphokinase OS=Escherichia coli (strain K12) GN=relA PE=1
SV=1
Length = 744
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
Query: 224 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 283
L VE +L+ + + + A LL D +S D + + G V +L+ GV ++
Sbjct: 56 LWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAA 115
Query: 284 LSKLARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFA 342
+ +L + + + + D + M LAM D R V+IKLA+R+ ++ + P +R A
Sbjct: 116 IRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAA 175
Query: 343 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEK 400
KE I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E E + +
Sbjct: 176 KECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGH 235
Query: 401 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 460
L +K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL
Sbjct: 236 LRAEMKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALG 294
Query: 461 VVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAH 520
+VH + +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAH
Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAH 354
Query: 521 WRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 550
W+YKEG S + W R ++ WQ E
Sbjct: 355 WKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
>sp|P0AG21|RELA_ECOL6 GTP pyrophosphokinase OS=Escherichia coli O6:H1 (strain CFT073 /
ATCC 700928 / UPEC) GN=relA PE=3 SV=1
Length = 744
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
Query: 224 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 283
L VE +L+ + + + A LL D +S D + + G V +L+ GV ++
Sbjct: 56 LWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAA 115
Query: 284 LSKLARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFA 342
+ +L + + + + D + M LAM D R V+IKLA+R+ ++ + P +R A
Sbjct: 116 IRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAA 175
Query: 343 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEK 400
KE I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E E + +
Sbjct: 176 KECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGH 235
Query: 401 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 460
L +K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL
Sbjct: 236 LRAEMKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALG 294
Query: 461 VVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAH 520
+VH + +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAH
Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAH 354
Query: 521 WRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 550
W+YKEG S + W R ++ WQ E
Sbjct: 355 WKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
>sp|P0AG22|RELA_ECO57 GTP pyrophosphokinase OS=Escherichia coli O157:H7 GN=relA PE=3 SV=1
Length = 744
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 120/332 (36%), Positives = 181/332 (54%), Gaps = 6/332 (1%)
Query: 224 LLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQ 283
L VE +L+ + + + A LL D +S D + + G V +L+ GV ++
Sbjct: 56 LWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKSVVNLIHGVRDMAA 115
Query: 284 LSKLARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQRFA 342
+ +L + + + + D + M LAM D R V+IKLA+R+ ++ + P +R A
Sbjct: 116 IRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHLREVKDAPEDERVLAA 175
Query: 343 KETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEK 400
KE I+ PLANRLGI K +LE+ CF++L+P ++ ++ L E E + +
Sbjct: 176 KECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGH 235
Query: 401 LEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALR 460
L +K + + V GR K +YSI KM KK L DE+ D+ +R++ E +DCY AL
Sbjct: 236 LRAEMKAEGVKAEVY-GRPKHIYSIWRKMQKKNLAFDELFDVRAVRIVAERLQDCYAALG 294
Query: 461 VVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAH 520
+VH + +P + DY+ PK NGYQS+HTVV G G +E+QIRTK+MH AE G AAH
Sbjct: 295 IVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTVEIQIRTKQMHEDAELGVAAH 354
Query: 521 WRYKEGDCQHS--SFVLQMVEWARWVLTWQCE 550
W+YKEG S + W R ++ WQ E
Sbjct: 355 WKYKEGAAAGGARSGHEDRIAWLRKLIAWQEE 386
>sp|P44644|RELA_HAEIN GTP pyrophosphokinase OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=relA PE=3 SV=1
Length = 743
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 117/327 (35%), Positives = 185/327 (56%), Gaps = 11/327 (3%)
Query: 228 VETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKL 287
VE +L + ++ + +L + + ++ + FGA + L++GV ++ + +L
Sbjct: 63 VEMVEILHELNMDAETLLTAMLFPIVANKLTDWESLKEKFGAKITKLLKGVLEMDNIRQL 122
Query: 288 ARENNTASKTVEADRLHTMFLAMADA-RAVLIKLADRLHNMMTLDALPLCKRQR---FAK 343
+ ++ ++ D + M LAM D R V+IKLA+R+ DA C + K
Sbjct: 123 NASH--SANALQVDNVRRMLLAMVDDFRCVIIKLAERI--TFLRDAEHRCAEEDKVLAVK 178
Query: 344 ETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQHTELSSKLVE--CFDEAMVTSAIEKL 401
E I+ PLANRLGI K +LE+ CF++L+P+Q+ ++ L E E + + +L
Sbjct: 179 ECSYIYAPLANRLGIGQLKWELEDYCFRYLHPEQYRAIAKLLQERRLDREHYIADFVSEL 238
Query: 402 EQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRV 461
L++ NI + + GR K +YSI KM KK L ++D+ +R+IV+ +DCY AL +
Sbjct: 239 SGYLRE-NIEQVEVYGRPKHIYSIWRKMQKKHLEFSGLYDVRAVRIIVQKLQDCYTALGI 297
Query: 462 VHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHW 521
VH + +P + DY+ PK NGYQS+HTVV G+G P+EVQIRT++MH AE G AAHW
Sbjct: 298 VHTQFKHLPKEFDDYVANPKPNGYQSIHTVVLGKGGKPIEVQIRTQQMHDDAELGMAAHW 357
Query: 522 RYKEGDCQHSSFVLQMVEWARWVLTWQ 548
+YKEG+ S + + W R +L WQ
Sbjct: 358 KYKEGNTGSMSAYEEKIAWLRKLLAWQ 384
>sp|P75386|SPOT_MYCPN Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma pneumoniae (strain ATCC 29342 / M129)
GN=spoT PE=3 SV=1
Length = 733
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/329 (34%), Positives = 191/329 (58%), Gaps = 5/329 (1%)
Query: 200 FVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLS 259
+ KA +++ H Q R SG+P+ +H + TA+ L +S V AGLLHD ++D ++
Sbjct: 39 LITKALDYSKKWHGEQKRLSGEPFFIHPLRTALRLVEWNMDSNTVCAGLLHDIIEDTQVT 98
Query: 260 YDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLA-MADARAVLI 318
+ FG + DLV V+K++ SK R+ N + + L + ++ + A+++
Sbjct: 99 EADLTAIFGKEITDLVVKVTKITSESKKQRQLNRKKEDLNLKSLVNIAMSSQQEVNALVL 158
Query: 319 KLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWKVQLENLCFKHLNPDQH 378
KLADRL N+ +++ L + K++ AKETLE++ +A R+G+ K QL +L FK L+P
Sbjct: 159 KLADRLDNISSIEFLAVEKQKIIAKETLELYAKIAGRIGMYPVKTQLADLSFKVLDPKNF 218
Query: 379 TELSSKLVE--CFDEAMVTSAIEKLEQALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTM 436
SK+ + F + + ++LE+ L+ I + L R K +YS + K+ + +
Sbjct: 219 NNTLSKINQQKVFYDNEWGNFKKQLEEMLEQNQIEYR-LESRIKGIYSTYQKLTFHEQNI 277
Query: 437 DEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEG 496
+IHD++ +RLIV++E DCY L ++H + + KDYI PK N YQS+HT V +G
Sbjct: 278 AKIHDLFAIRLIVKSELDCYHLLGLIHLNFTVLMKHFKDYIASPKQNFYQSIHTTVRLKG 337
Query: 497 LVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
L +E+QIRT+ M +++GFA+HW YKE
Sbjct: 338 L-NVEIQIRTQRMDHVSKYGFASHWIYKE 365
>sp|P47520|SPOT_MYCGE Probable guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
OS=Mycoplasma genitalium (strain ATCC 33530 / G-37 /
NCTC 10195) GN=spoT PE=3 SV=1
Length = 720
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 190/345 (55%), Gaps = 5/345 (1%)
Query: 184 EFLANAQLKHKIFREDFVIKAFYEAERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTV 243
+FLA K + + KAFY A+ H Q R SG+P+ +H + TA+ L +
Sbjct: 10 DFLAKIAQKFTNAEIELINKAFYHAKTWHENQKRLSGEPFFIHPLRTALSLVEWNMDPIT 69
Query: 244 VAAGLLHDTLDDAFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRL 303
+ AGLLHD ++D + I F +A+LV V+K++ SK R + +
Sbjct: 70 ICAGLLHDIIEDTDQTEANIAMIFSKEIAELVTKVTKITNESKKQRHLKNKKENLNLKSF 129
Query: 304 HTMFL-AMADARAVLIKLADRLHNMMTLDALPLCKRQRFAKETLEIFVPLANRLGISTWK 362
+ + + + +++KLADRL N+ +++ LP+ K++ AKETLE++ +A R+G+ K
Sbjct: 130 VNIAINSQQEINVMVLKLADRLDNIASIEFLPIEKQKVIAKETLELYAKIAGRIGMYPVK 189
Query: 363 VQLENLCFKHLNPDQHTELSSKL--VECFDEAMVTSAIEKLEQALKDKNISFLVLCGRHK 420
+L +L FK L+ + SK+ + F + + ++L++ L I + L R K
Sbjct: 190 TKLADLSFKVLDLKNYDNTLSKINKQKVFYDNEWDNFKQQLKKILAQNQIEY-QLESRIK 248
Query: 421 SLYSIHCKMLKKKLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRP 480
+YS + K+ + + +IHD++ +RLI ++E DCY L ++H + KDYI P
Sbjct: 249 GIYSTYKKLTVHEQNISKIHDLFAIRLITKSELDCYHILGLIHLNFLIDSKYFKDYIASP 308
Query: 481 KFNGYQSLHTVVTGEGLVPLEVQIRTKEMHLQAEFGFAAHWRYKE 525
K N YQS+HT V +GL +E+QIRT++M ++FG A+HW YKE
Sbjct: 309 KQNLYQSIHTTVRLKGL-NVEIQIRTQQMDNVSKFGLASHWIYKE 352
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 143/322 (44%), Gaps = 22/322 (6%)
Query: 209 ERAHRGQMRASGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAFLSYDYIFRTFG 268
E H+ + P +H + A+ L +S+ A LLH+ + L DY F
Sbjct: 17 ELYHKYCYDKTTYPDQIHTITKALQL-----DSSSFTAVLLHENIQHLNLE-DY--NHFN 68
Query: 269 AGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNMM 328
+ LV+ ++KLS + A + + L A+L L LH +
Sbjct: 69 NNIIYLVDVINKLSTIHYKPY----AEQYIHFHELLLTINPKLQETAILTSLVPLLHKVS 124
Query: 329 TLD-ALPLCKRQRFAKETLEIFVP-LANRLGISTWKVQLENLCFKHLNPDQHTELSSKLV 386
+ Q ++ ++P L + + L++LCFK P++ + +
Sbjct: 125 IFNLEYNNTNAQHISEIITNCYIPYLLSYTAHNDLAYLLQDLCFKIQYPEERNRILHYMY 184
Query: 387 ECFDEAMVTSAIEKLEQ----ALKDKNISFLVLCGRHKSLYSIHCKMLKKKLTMDEIHDI 442
+ + + + I +EQ + NI L R KS YSI K L K + + ++DI
Sbjct: 185 WLYPD--IDNIIHNIEQQFGNIFRKLNIK-ASLSYRIKSPYSIWIKTLVKDIHITALNDI 241
Query: 443 YGLRLIVENEEDCYQALRVVHQLWAEVPGKMKDYITRPKFNGYQSLHTVVTGEGLVPLEV 502
R IV N++ CY +++H + + + DYI PK NGYQS+H V++G +E+
Sbjct: 242 LAFRAIVPNKKACYDVSKLIHLHYNTITSQFVDYIRYPKNNGYQSIHLVISGGNKGNIEL 301
Query: 503 QIRTKEMHLQAEFGFAAHWRYK 524
QIR+ MH Q ++G +AH YK
Sbjct: 302 QIRSTTMHRQTQYG-SAHHTYK 322
>sp|Q568P1|MESH1_DANRE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Danio rerio GN=hddc3 PE=2 SV=1
Length = 180
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 15/128 (11%)
Query: 208 AERAHRGQMRA--SGDPYLLHCVETAMLLAAIG--ANSTVVAAGLLHDTLDDAFLSYDYI 263
A HR Q G PY+ H + A +L+ G + V+ A LLHDT++D +++ +
Sbjct: 16 AAEKHRNQRHKDPEGTPYINHPIGVARILSHEGEITDVEVIQAALLHDTVEDTDTTFEEL 75
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
FGA VA +V+GV+ L K RE R +A L+KLAD+
Sbjct: 76 ESVFGATVARIVQGVTDDKSLPKAERE-----------RQQVEHAPHCSHQAKLVKLADK 124
Query: 324 LHNMMTLD 331
L+N+ L+
Sbjct: 125 LYNLRDLN 132
>sp|P29941|YCB8_PSEDE Uncharacterized 19.2 kDa protein in cobO 3'region OS=Pseudomonas
denitrificans PE=4 SV=1
Length = 175
Score = 58.9 bits (141), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 9/135 (6%)
Query: 199 DFVIKAFYEAERAHRGQMRA-SGDPYLLHCVETAMLLAAIGANSTVVAAGLLHDTLDDAF 257
D A A RAH Q R G PY++H + A ++ ++ ++AA LLHDT++D
Sbjct: 12 DLENSALQFATRAHGEQKRKYDGRPYIVHPIAVAEIVRSVPHTPEMIAAALLHDTVEDTD 71
Query: 258 LSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVL 317
+ I FG VA L V+ L+ +S N K E DR H LA A A A
Sbjct: 72 ATLLEIKEAFGPKVATL---VAWLTDISTPFHGNRQVRK--ELDRQH---LASAPAAAKT 123
Query: 318 IKLADRLHNMMTLDA 332
+KLAD + N + + A
Sbjct: 124 VKLADLIDNAIAIKA 138
>sp|Q8N4P3|MESH1_HUMAN Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Homo sapiens GN=HDDC3 PE=1 SV=3
Length = 179
Score = 58.2 bits (139), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 21/172 (12%)
Query: 208 AERAHRGQMRA--SGDPYLLHCVETAMLLA--AIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A R HR Q R G PY+ H + A +L A + V+ A LLHDT++D + D +
Sbjct: 15 AARKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
FGA V LVE V+ L KL R+ RL + A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERK-----------RLQVEQAPHSSPGAKLVKLADK 123
Query: 324 LHNMMTLDALPLCKRQRFAKETLEIFVPLANRL--GISTWKVQLENLCFKHL 373
L+N+ L+ C + +++ ++ + A ++ G+ QLE KHL
Sbjct: 124 LYNLRDLNR---CTPEGWSEHRVQEYFEWAAQVVKGLQGTNRQLEE-ALKHL 171
>sp|Q28C98|MESH1_XENTR Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Xenopus tropicalis GN=hddc3 PE=2 SV=1
Length = 179
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 15/135 (11%)
Query: 200 FVIKAFYEAERAHRGQMRASGD--PYLLHCVETAMLLAAIGA--NSTVVAAGLLHDTLDD 255
+++A A H+ Q R + PY+ H + A +L+ G ++ V+ A LLHDT++D
Sbjct: 7 LILEAANFAAEKHKQQRRKDPEKTPYINHPLGVARILSHEGGITDTAVLQAALLHDTVED 66
Query: 256 AFLSYDYIFRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARA 315
+++ I FG V ++VE V+ L K+ R+ RL +A
Sbjct: 67 TNTTFEEIELHFGQDVRNIVEEVTDDKTLPKMERK-----------RLQMEHAPHCSQKA 115
Query: 316 VLIKLADRLHNMMTL 330
L+KLAD+L+N+ L
Sbjct: 116 KLVKLADKLYNLRDL 130
>sp|P39583|YWAC_BACSU GTP pyrophosphokinase YwaC OS=Bacillus subtilis (strain 168)
GN=ywaC PE=1 SV=1
Length = 210
Score = 55.5 bits (132), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 56/118 (47%), Gaps = 13/118 (11%)
Query: 418 RHKSLYSIHCKMLKK------KLTMDEIHDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 471
R KS SI K+++K K + IHDI G+R+I D Y + V+ Q
Sbjct: 58 RVKSFESIVNKLMRKGCEITTKEMKEHIHDIAGVRIICSFISDIYNVVNVLKQHEDLRIV 117
Query: 472 KMKDYITRPKFNGYQSLHTVVTGE-------GLVPLEVQIRTKEMHLQAEFGFAAHWR 522
K+KDYI PK NGY+SLH ++ V E+QIRT M A +++
Sbjct: 118 KVKDYIQTPKPNGYRSLHLIIEMPVNLTNRVEYVKAEIQIRTIAMDFWASLEHKIYYK 175
>sp|Q9VAM9|MESH1_DROME Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Drosophila melanogaster GN=Mesh1 PE=1 SV=1
Length = 179
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 212 HRGQMRASGD--PYLLHCVETAMLLA--AIGANSTVVAAGLLHDTLDDAFLSYDYIFRTF 267
HR Q R PY+ H + + +L+ A + V+ A LLHD ++D S++ + + F
Sbjct: 20 HRQQRRKDPQETPYVNHVINVSTILSVEACITDEGVLMAALLHDVVEDTDASFEDVEKLF 79
Query: 268 GAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADRLHNM 327
G V LV V+ L K R+ RL A + RA LIKLAD+L N+
Sbjct: 80 GPDVCGLVREVTDDKSLEKQERK-----------RLQIENAAKSSCRAKLIKLADKLDNL 128
Query: 328 MTL 330
L
Sbjct: 129 RDL 131
>sp|Q9D114|MESH1_MOUSE Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1
OS=Mus musculus GN=Hddc3 PE=2 SV=1
Length = 179
Score = 53.5 bits (127), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 15/128 (11%)
Query: 208 AERAHRGQMRA--SGDPYLLHCVETAMLLA--AIGANSTVVAAGLLHDTLDDAFLSYDYI 263
A HR Q R G PY+ H + A +L A + V+ A LLHDT++D + D +
Sbjct: 15 AAHKHRQQRRKDPEGTPYINHPIGVARILTHEAGITDIVVLQAALLHDTVEDTDTTLDEV 74
Query: 264 FRTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADARAVLIKLADR 323
FGA V LVE V+ L KL R+ + + A L+KLAD+
Sbjct: 75 ELHFGAQVRRLVEEVTDDKTLPKLERKRQQVEQA-----------PHSSPGAKLVKLADK 123
Query: 324 LHNMMTLD 331
L+N+ L+
Sbjct: 124 LYNLRDLN 131
>sp|O31611|YJBM_BACSU GTP pyrophosphokinase YjbM OS=Bacillus subtilis (strain 168)
GN=yjbM PE=1 SV=1
Length = 211
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 58/119 (48%), Gaps = 10/119 (8%)
Query: 415 LCGRHKSLYSIHCKMLKKKLTMDEI---HDIYGLRLIVENEEDCYQALRVVHQLWAEVPG 471
+ GR K + SI K +K + + EI DI GLR++ + +D ++
Sbjct: 43 VTGRVKPVASILEKARRKSIPLHEIETMQDIAGLRIMCQFVDDIQIVKEMLFARKDFTVV 102
Query: 472 KMKDYITRPKFNGYQSLHTVV-------TGEGLVPLEVQIRTKEMHLQAEFGFAAHWRY 523
+DYI K +GY+S H VV +GE V +E+QIRT M+ A + +++Y
Sbjct: 103 DQRDYIAEHKESGYRSYHLVVLYPLQTVSGEKHVLVEIQIRTLAMNFWATIEHSLNYKY 161
>sp|B3QPX3|SYP_CHLP8 Proline--tRNA ligase OS=Chlorobaculum parvum (strain NCIB 8327)
GN=proS PE=3 SV=1
Length = 481
Score = 36.2 bits (82), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 573 SHADDCPFSYKPQCSHDGPVFVIMIENDKMSVQEFPT----------SSTVMDLLERAGR 622
+H+DD P+ + V + +++ DK V+ ST +D E
Sbjct: 270 AHSDDKGLVLPPKLASRQVVIIPILKGDKEEVRAHARFIAKALNKHGISTFVDDSENNSP 329
Query: 623 GS--SRWSPYGFPLKEELRPRLNHKAVGDPRCKLKMGDVVELTPAIPDKSLTEYREEI-- 678
G + + G P++ EL PR + + +C + D E T + D +TE EEI
Sbjct: 330 GWKFAEYELQGIPVRIELGPR----DIAEGKCIVARRDTFEKTEVLLDAEMTENIEEILN 385
Query: 679 ---QRMYERGLAV--SNTGPAVT 696
Q +YER L NT A T
Sbjct: 386 NIQQNLYERALQFRQDNTVEATT 408
>sp|P03303|POLG_HRV14 Genome polyprotein OS=Human rhinovirus 14 PE=1 SV=3
Length = 2179
Score = 35.4 bits (80), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 88/223 (39%), Gaps = 25/223 (11%)
Query: 206 YEAERAHRGQMRASG--DPY----LLHCVETAMLLAAIGANSTVVAAGL--LHDTLDDAF 257
Y R G M+ G +P +L C+ + L G + V A + L ++
Sbjct: 944 YYPSRFQAGVMKGVGPAEPGDCGGILRCIHGPIGLLTAGGSGYVCFADIRQLECIAEEQG 1003
Query: 258 LSYDYIF---RTFGAGVADLVEGVSKLSQLSKLARENNTASKTVEADRLHTMFLAMADAR 314
LS DYI R FG G D + +K+++L ++A++ T ++ + + M A
Sbjct: 1004 LS-DYITGLGRAFGVGFTDQIS--TKVTELQEVAKDFLTT-------KVLSKVVKMVSAL 1053
Query: 315 AVLIKLADRLHNMMTLDALPLCKRQ--RFAKETL--EIFVPLANRLGISTWKVQLENLCF 370
++ + D L + AL C RF K + VP R W + + C
Sbjct: 1054 VIICRNHDDLVTVTATLALLGCDGSPWRFLKMYISKHFQVPYIERQANDGWFRKFNDACN 1113
Query: 371 KHLNPDQHTELSSKLVECFDEAMVTSAIEKLEQALKDKNISFL 413
+ SKL+E ++ A EKLE K K + L
Sbjct: 1114 AAKGLEWIANKISKLIEWIKNKVLPQAKEKLEFCSKLKQLDIL 1156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,081,851
Number of Sequences: 539616
Number of extensions: 10479737
Number of successful extensions: 28528
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 27115
Number of HSP's gapped (non-prelim): 739
length of query: 703
length of database: 191,569,459
effective HSP length: 125
effective length of query: 578
effective length of database: 124,117,459
effective search space: 71739891302
effective search space used: 71739891302
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)