BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005305
(703 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FK33|PP427_ARATH Pentatricopeptide repeat-containing protein At5g50390,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H58 PE=2
SV=1
Length = 701
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/712 (64%), Positives = 546/712 (76%), Gaps = 20/712 (2%)
Query: 1 MEIPLLRYQSVALDQIQNSCSFSCSFTANKVLKGKSLLSGCYFSLDKRKWKRSFQRVECC 60
MEIPL RYQS+ LD+I++S S K L FSL R+WK F R+ C
Sbjct: 1 MEIPLSRYQSIRLDEIRDSSS-----------NPKVLTFPRKFSLRGRRWKNPFGRLSCS 49
Query: 61 LMEQGLKPRPKPN----KIYTEELKESSLPDTQMKKPSAGICSQIEKLVLNKRYREALEL 116
+ QGLKP+PK +I +E K+ L DTQ+ K ICSQIEKLVL R+REA EL
Sbjct: 50 SVVQGLKPKPKLKPEPIRIEVKESKDQILDDTQISKSGVTICSQIEKLVLCNRFREAFEL 109
Query: 117 FEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHV 176
FEILE F VG STYDAL+ ACI L+SIR VKRV+ +M+S GFEP+ YM NR+LLMHV
Sbjct: 110 FEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHV 169
Query: 177 RCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFAT 236
+CGM+IDARRLFDE+PERNL S II+G ++ G+Y+EAF LF +WEE SDC + TFA
Sbjct: 170 KCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAV 229
Query: 237 MIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKT 296
M+RASAGL I VGKQLH CALK+G DN FVSC LIDMYSKCG IEDA+ F+ M EKT
Sbjct: 230 MLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT 289
Query: 297 TVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHA 356
TV WN +IAGYALHGYSEEAL L Y+MRDSGV +D FT S++IRI T+LA LE KQAHA
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 357 GLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEE 416
L+R+GF +IVAN+ALVDFYSKWGR++ AR+VFDK+ KN+ISWNAL+ GY NHGRG +
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 417 AVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMI 476
AV+LFE+M+ + PNHVTFLAVLSAC+ SGLSE+GWEIF SMS H IKPRAMHYACMI
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 477 ELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLS 536
ELLGR+GLLDEA A IR AP KTT NMWAALL ACR+ NLELG+ AEKLYGM PEKL
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
Query: 537 NYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQ--SHVQT 594
NYVV+ N+YNS GK EAA V+ TL KGL M+PAC+W+EV Q H FLSGD+ S+ +T
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNET 589
Query: 595 --KEIYRKVDRMMLEISKHGYVPEEKTLLPDVDE-QEQRVLSYHSEKLAVAFGLINTSDW 651
++IY+KVD +M EIS++GY EE+ LLPDVDE +E+RV YHSEKLA+A+GL+NT +W
Sbjct: 590 VKRQIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEEERVGRYHSEKLAIAYGLVNTPEW 649
Query: 652 TPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
PLQI Q+HRIC +CH ++ I++VTGRE+VVRDASRFHHFK+G CSCG YW
Sbjct: 650 NPLQITQNHRICKNCHKVVEFISLVTGREMVVRDASRFHHFKEGKCSCGGYW 701
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/572 (39%), Positives = 358/572 (62%), Gaps = 2/572 (0%)
Query: 133 YDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMP 192
Y+ L+ C + + + + V +++L + F D+ M N +L M+ +CG + +AR++F++MP
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 193 ERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQ 252
+R+ V+ +I+G +A L F + T +++I+A+A G Q
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 253 LHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGY 312
LH +K GF NV V AL+D+Y++ G ++DAQ VFD + + V WN +IAG+A
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSG 242
Query: 313 SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSA 372
+E+AL+L+ M G + HF+++ + C+ LE K HA +++ G L A +
Sbjct: 243 TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 302
Query: 373 LVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPN 432
L+D Y+K G I DAR +FD++ ++V+SWN+L+ Y HG G+EAV FE+M G+RPN
Sbjct: 303 LLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPN 362
Query: 433 HVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALI 492
++FL+VL+ACS SGL + GW ++ M +D I P A HY +++LLGR G L+ A I
Sbjct: 363 EISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGDLNRALRFI 421
Query: 493 RGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLK 552
P + T +W ALL ACR++ N ELG +AAE ++ ++P+ +V+L NIY S G+
Sbjct: 422 EEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWN 481
Query: 553 EAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHG 612
+AA V + ++ G++ PACSW+E++ H+F++ D+ H Q +EI RK + ++ +I + G
Sbjct: 482 DAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELG 541
Query: 613 YVPEEKTLLPDVDEQEQRV-LSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIK 671
YVP+ ++ VD+QE+ V L YHSEK+A+AF L+NT + + I ++ R+C DCH AIK
Sbjct: 542 YVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKNIRVCGDCHTAIK 601
Query: 672 LIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
L + V GREI+VRD +RFHHFKDG CSC DYW
Sbjct: 602 LASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 186/351 (52%), Gaps = 11/351 (3%)
Query: 221 DLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCG 280
DL + R + T+++ +L+ G+ +H+ L+ F ++ + L++MY+KCG
Sbjct: 50 DLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 281 SIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIR 340
S+E+A+ VF++M ++ V W T+I+GY+ H +AL + +M G + FT S +I+
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 341 ICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS 400
Q H V+ GF ++ SAL+D Y+++G ++DA+ VFD + +N +S
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 401 WNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMS 460
WNALIAG+ E+A+ELF+ ML +G RP+H ++ ++ ACS +G E+G + M
Sbjct: 230 WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMI 289
Query: 461 RDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELG 520
+ + K A ++++ + G + +A + + + W +LLTA +G G
Sbjct: 290 KSGE-KLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVS-WNSLLTAYAQHG---FG 344
Query: 521 K-----FAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGL 566
K F + G+ P ++S ++ +L + SG L E +++ G+
Sbjct: 345 KEAVWWFEEMRRVGIRPNEIS-FLSVLTACSHSGLLDEGWHYYELMKKDGI 394
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 95/208 (45%), Gaps = 10/208 (4%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
+ALELF+ + GF +Y +L AC + + K V +YM+ +G + + N +
Sbjct: 245 KALELFQGM-LRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTL 303
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
L M+ + G + DAR++FD + +R++VS N ++ G EA F EE G
Sbjct: 304 LDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWF----EEMRRVGI 359
Query: 232 R----TFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQG 287
R +F +++ A + L+ G + K G + ++D+ + G + A
Sbjct: 360 RPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALR 419
Query: 288 VFDEMS-EKTTVGWNTIIAGYALHGYSE 314
+EM E T W ++ +H +E
Sbjct: 420 FIEEMPIEPTAAIWKALLNACRMHKNTE 447
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 462 bits (1188), Expect = e-129, Method: Compositional matrix adjust.
Identities = 232/596 (38%), Positives = 366/596 (61%), Gaps = 3/596 (0%)
Query: 110 YREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRN 169
Y E++ LF + + G T+ ++ A +GL +++ + ++TGF D + N
Sbjct: 231 YTESIHLFLKMR-QSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGN 289
Query: 170 RVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDC 229
++L + + +++ R LFDEMPE + VS N++I+ + Y + F ++ D
Sbjct: 290 QILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDR 349
Query: 230 GSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVF 289
+ FATM+ +A L + +G+QLH AL + V +L+DMY+KC E+A+ +F
Sbjct: 350 RNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIF 409
Query: 290 DEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLE 349
+ ++TTV W +I+GY G L L+ +MR S ++ D TF+ +++ ASL
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 350 HAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYG 409
KQ HA ++R G ++ + S LVD Y+K G I+DA VF++M +N +SWNALI+ +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 410 NHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRA 469
++G GE A+ F +M+ +G++P+ V+ L VL+ACS G E+G E FQ+MS + I P+
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKK 589
Query: 470 MHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYG 529
HYACM++LLGR G EA L+ PF+ + MW+++L ACR++ N L + AAEKL+
Sbjct: 590 KHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFS 649
Query: 530 MEP-EKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGD 588
ME + YV + NIY ++G+ ++ +V + +R +G++ +PA SW+EV + HVF S D
Sbjct: 650 MEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSND 709
Query: 589 QSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQ-RVLSYHSEKLAVAFGLIN 647
Q+H EI RK++ + EI + GY P+ +++ DVDEQ + L YHSE+LAVAF LI+
Sbjct: 710 QTHPNGDEIVRKINELTAEIEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALIS 769
Query: 648 TSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
T + P+ ++++ R C DCH AIKLI+ + REI VRD SRFHHF +G+CSCGDYW
Sbjct: 770 TPEGCPIVVMKNLRACRDCHAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 17/445 (3%)
Query: 107 NKRYREALELFEILEFEGGFDVGSS-TYDALISACIGLRSIREVKRVFSYMLSTGFEPDL 165
N + EA +LF + + T+ L+ C V +V ++ + GF+ +
Sbjct: 123 NSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNP 182
Query: 166 YMRNRVLLMHVRCGMMIDARRL------FDEMPERNLVSCNMIIAGMIDSGDYLEAFLLF 219
++ +L+ C + RRL F+E+PE++ V+ N +I G G Y E+ LF
Sbjct: 183 FLTVSNVLLKSYC----EVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLF 238
Query: 220 LDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKC 279
L + + TF+ +++A GL ++G+QLH+ ++ GF + V ++D YSK
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 280 GSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMII 339
+ + + +FDEM E V +N +I+ Y+ E +L + EM+ G +F F+ ++
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATML 358
Query: 340 RICTRLASLEHAKQAH-AGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
I L+SL+ +Q H L+ + V NS LVD Y+K E+A +F + +
Sbjct: 359 SIAANLSSLQMGRQLHCQALLATADSILHVGNS-LVDMYAKCEMFEEAELIFKSLPQRTT 417
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQS 458
+SW ALI+GY G ++LF +M + +R + TF VL A + G ++
Sbjct: 418 VSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAF 477
Query: 459 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
+ R ++ + ++++ + G + +A + P + + W AL++A NG+ E
Sbjct: 478 IIRSGNLE-NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVS-WNALISAHADNGDGE 535
Query: 519 --LGKFAAEKLYGMEPEKLSNYVVL 541
+G FA G++P+ +S VL
Sbjct: 536 AAIGAFAKMIESGLQPDSVSILGVL 560
Score = 145 bits (366), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 128/499 (25%), Positives = 220/499 (44%), Gaps = 80/499 (16%)
Query: 148 EVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMI 207
+ +RV + ++ TGF+ D N ++ +R G + AR+++DEMP +N VS N +I+G +
Sbjct: 31 DTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHV 90
Query: 208 DSGD-------------------------------YLEAFLLFLDLWEEFSDC---GSRT 233
+GD + EAF LF + S C T
Sbjct: 91 KTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRS-SSCTLPDHVT 149
Query: 234 FATMIRASAGLELISVGKQLHSCALKMGFGDNVF--VSCALIDMYSKCGSIEDAQGVFDE 291
F T++ + Q+H+ A+K+GF N F VS L+ Y + ++ A +F+E
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 292 MSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHA 351
+ EK +V +NT+I GY G E++ L+ +MR SG + FTFS +++ L
Sbjct: 210 IPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALG 269
Query: 352 KQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNH 411
+Q HA V GF D + ++DFYSK R+ + R +FD+M + +S+N +I+ Y
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 412 GRGEEAVELFEQMLLNGMRPNHVTFLAVLS-ACSRSGLS--------------------- 449
+ E ++ F +M G + F +LS A + S L
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 450 -------------ERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAP 496
E IF+S+ + + A+ + + L GL + F +RG+
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL--KLFTKMRGSN 447
Query: 497 FKTTKNMWAALLTACRVNGNLELGK-FAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAA 555
+ ++ +A +L A +L LGK A + E + + L+++Y G +K+A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 556 EVIRTLRRKGLRMLPACSW 574
+V + + A SW
Sbjct: 508 QVFEEMPDRN-----AVSW 521
Score = 80.9 bits (198), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 116/249 (46%), Gaps = 38/249 (15%)
Query: 231 SRTFATM--IRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGV 288
SRT AT+ +R + + +++ + +K GF + S +++ + G + A+ V
Sbjct: 12 SRTLATLRQLRQPSPATFLDT-RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKV 70
Query: 289 FDEMSEKTTVGWNTIIAG-------------------------------YALHGYSEEAL 317
+DEM K TV NT+I+G YA + + +EA
Sbjct: 71 YDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAF 130
Query: 318 DLYYEM-RDSGVKM-DHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLD--IVANSAL 373
L+ +M R S + DH TF+ ++ C Q HA V+ GF + + ++ L
Sbjct: 131 KLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL 190
Query: 374 VDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNH 433
+ Y + R++ A +F+++ K+ +++N LI GY G E++ LF +M +G +P+
Sbjct: 191 LKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSD 250
Query: 434 VTFLAVLSA 442
TF VL A
Sbjct: 251 FTFSGVLKA 259
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 25/232 (10%)
Query: 346 ASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALI 405
A+ ++ A +++ GF D ++ +V+ + G++ AR V+D+M KN +S N +I
Sbjct: 27 ATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMI 86
Query: 406 AGYGNHGRGEEAVELFEQMLLNGMRPNH--VTFLAVLSACSRSGLSERGWEIFQSMSRDH 463
+G+ G A +LF+ M P+ VT+ ++ +R+ + +++F+ M R
Sbjct: 87 SGHVKTGDVSSARDLFDAM------PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSS 140
Query: 464 KIK-PRAMHYACMI----ELLGREGLLD-EAFALIRG---APFKTTKNMWAALLTACRVN 514
P + + ++ + + + + AFA+ G PF T N+ L + C V
Sbjct: 141 SCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVL--LKSYCEVR 198
Query: 515 GNLELGKFAAEKLYGMEPEKLS-NYVVLLNIYNSSGKLKEAAEVIRTLRRKG 565
L+L E++ PEK S + L+ Y G E+ + +R+ G
Sbjct: 199 -RLDLACVLFEEI----PEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSG 245
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 442 bits (1138), Expect = e-123, Method: Compositional matrix adjust.
Identities = 220/600 (36%), Positives = 367/600 (61%), Gaps = 5/600 (0%)
Query: 107 NKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLY 166
N +++AL ++ ++ S T+ L+ AC GL ++ + V + + GF+ D++
Sbjct: 97 NNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 167 MRNRVLLMHVRCGMMIDARRLFD--EMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWE 224
++N ++ ++ +C + AR +F+ +PER +VS I++ +G+ +EA +F + +
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 225 EFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIED 284
+++ A L+ + G+ +H+ +KMG + +L MY+KCG +
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 285 AQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTR 344
A+ +FD+M + WN +I+GYA +GY+ EA+D+++EM + V+ D + + I C +
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 345 LASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNAL 404
+ SLE A+ + + R + D+ +SAL+D ++K G +E AR VFD+ L ++V+ W+A+
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 405 IAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHK 464
I GYG HGR EA+ L+ M G+ PN VTFL +L AC+ SG+ GW F M+ DHK
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMA-DHK 454
Query: 465 IKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAA 524
I P+ HYAC+I+LLGR G LD+A+ +I+ P + +W ALL+AC+ + ++ELG++AA
Sbjct: 455 INPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAA 514
Query: 525 EKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVF 584
++L+ ++P +YV L N+Y ++ AEV ++ KGL CSW+EV+ + F
Sbjct: 515 QQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAF 574
Query: 585 LSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDV-DEQEQRVLSYHSEKLAVAF 643
GD+SH + +EI R+V+ + + + G+V + L D+ DE+ + L HSE++A+A+
Sbjct: 575 RVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAY 634
Query: 644 GLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
GLI+T TPL+I ++ R C +CH A KLI+ + REIVVRD +RFHHFKDG+CSCGDYW
Sbjct: 635 GLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 121/480 (25%), Positives = 235/480 (48%), Gaps = 48/480 (10%)
Query: 148 EVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMI 207
++K++ + +L G + ++ +++ G + AR++FD++P + N II G
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 208 DSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVF 267
+ + +A L++ ++ S TF +++A +GL + +G+ +H+ ++GF +VF
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVF 155
Query: 268 VSCALIDMYSKCGSIEDAQGVFD--EMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRD 325
V LI +Y+KC + A+ VF+ + E+T V W I++ YA +G EAL+++ +MR
Sbjct: 156 VQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRK 215
Query: 326 SGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIED 385
VK D ++ T L L+ + HA +V+ G ++ +L Y+K G++
Sbjct: 216 MDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVAT 275
Query: 386 ARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSR 445
A+ +FDKM N+I WNA+I+GY +G EA+++F +M+ +RP+ ++ + +SAC++
Sbjct: 276 AKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQ 335
Query: 446 SGLSERGWEIFQSMSR------------------------------DHKIKPRAMHYACM 475
G E+ +++ + R D + + ++ M
Sbjct: 336 VGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAM 395
Query: 476 IELLGREGLLDEAFALIRG---APFKTTKNMWAALLTACRVNGNLELGKFAAEKL--YGM 530
I G G EA +L R + LL AC +G + G + ++ + +
Sbjct: 396 IVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKI 455
Query: 531 EPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLR-RKGLR----MLPACSWIEVKKQPHVFL 585
P++ +Y ++++ +G L +A EVI+ + + G+ +L AC KK HV L
Sbjct: 456 NPQQ-QHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSAC-----KKHRHVEL 509
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 231/610 (37%), Positives = 358/610 (58%), Gaps = 37/610 (6%)
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVR---------CGMM 181
+ + +++ +C + +R + V +++ G + DLY N ++ M+ + G +
Sbjct: 106 NVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNV 165
Query: 182 ID---------------------------ARRLFDEMPERNLVSCNMIIAGMIDSGDYLE 214
D RR+F+ MP +++VS N IIAG SG Y +
Sbjct: 166 FDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYED 225
Query: 215 AFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALID 274
A + ++ S T ++++ + + GK++H ++ G +V++ +L+D
Sbjct: 226 ALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVD 285
Query: 275 MYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFT 334
MY+K IED++ VF + + + WN+++AGY +G EAL L+ +M + VK
Sbjct: 286 MYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 335 FSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKML 394
FS +I C LA+L KQ H ++R GFG +I SALVD YSK G I+ AR +FD+M
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 395 CKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWE 454
+ +SW A+I G+ HG G EAV LFE+M G++PN V F+AVL+ACS GL + W
Sbjct: 406 VLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWG 465
Query: 455 IFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVN 514
F SM++ + + HYA + +LLGR G L+EA+ I + T ++W+ LL++C V+
Sbjct: 466 YFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Query: 515 GNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSW 574
NLEL + AEK++ ++ E + YV++ N+Y S+G+ KE A++ +R+KGLR PACSW
Sbjct: 526 KNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSW 585
Query: 575 IEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRVLSY 634
IE+K + H F+SGD+SH +I + +M ++ K GYV + +L DVDE+ +R L +
Sbjct: 586 IEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLF 645
Query: 635 -HSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFK 693
HSE+LAVAFG+INT T +++ ++ RIC DCH AIK I+ +T REI+VRD SRFHHF
Sbjct: 646 GHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFN 705
Query: 694 DGMCSCGDYW 703
G CSCGDYW
Sbjct: 706 RGNCSCGDYW 715
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 110/257 (42%), Gaps = 39/257 (15%)
Query: 236 TMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEK 295
T+I+ ++ S KQLH+ ++ + S +I +Y+ + +A +F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI-VISIYTNLKLLHEALLLFKTLKSP 68
Query: 296 TTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAH 355
+ W ++I + +AL + EMR SG DH F +++ CT + L + H
Sbjct: 69 PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVH 128
Query: 356 AGLVRHGFGLDIVANSALVDFYSK------------------------------------ 379
+VR G D+ +AL++ Y+K
Sbjct: 129 GFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIM 188
Query: 380 -WGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLA 438
+G I+ R VF+ M K+V+S+N +IAGY G E+A+ + +M ++P+ T +
Sbjct: 189 PFG-IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSS 247
Query: 439 VLSACSRSGLSERGWEI 455
VL S +G EI
Sbjct: 248 VLPIFSEYVDVIKGKEI 264
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 7/251 (2%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S + V N RY EAL LF + G+ + ++I AC L ++ K++ Y+L
Sbjct: 313 SLVAGYVQNGRYNEALRLFRQM-VTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
GF ++++ + ++ M+ +CG + AR++FD M + VS II G G EA L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKM-GFGDNVFVSCALIDMYS 277
F ++ + F ++ A + + L+ + K+ G + A+ D+
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 278 KCGSIEDAQGVFDEMS-EKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFS 336
+ G +E+A +M E T W+T+++ ++H + L+L ++ + +D
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH----KNLELAEKVAEKIFTVDSENMG 547
Query: 337 MIIRICTRLAS 347
+ +C AS
Sbjct: 548 AYVLMCNMYAS 558
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/606 (37%), Positives = 367/606 (60%), Gaps = 7/606 (1%)
Query: 101 IEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTG 160
I +L N R +EAL +L E GF YDAL++AC+ R++R+ +RV ++M+ T
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGF----HGYDALLNACLDKRALRDGQRVHAHMIKTR 82
Query: 161 FEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFL 220
+ P Y+R R+L+ + +C + DAR++ DEMPE+N+VS +I+ +G EA +F
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFA 142
Query: 221 DLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCG 280
++ TFAT++ + + +GKQ+H +K + ++FV +L+DMY+K G
Sbjct: 143 EMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 281 SIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIR 340
I++A+ +F+ + E+ V IIAGYA G EEAL++++ + G+ ++ T++ ++
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLT 262
Query: 341 ICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS 400
+ LA L+H KQAH ++R V ++L+D YSK G + AR +FD M + IS
Sbjct: 263 ALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAIS 322
Query: 401 WNALIAGYGNHGRGEEAVELFEQMLLNG-MRPNHVTFLAVLSACSRSGLSERGWEIFQSM 459
WNA++ GY HG G E +ELF M ++P+ VT LAVLS CS + + G IF M
Sbjct: 323 WNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGM 382
Query: 460 -SRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
+ ++ KP HY C++++LGR G +DEAF I+ P K T + +LL ACRV+ +++
Sbjct: 383 VAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVD 442
Query: 519 LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVK 578
+G+ +L +EPE NYV+L N+Y S+G+ + V + +K + P SWI+ +
Sbjct: 443 IGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHE 502
Query: 579 KQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVD-EQEQRVLSYHSE 637
+ H F + D++H + +E+ K+ + +++ + GYVP+ +L DVD EQ++++L HSE
Sbjct: 503 QTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGYVPDLSCVLYDVDEEQKEKMLLGHSE 562
Query: 638 KLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMC 697
KLA+ FGLI T + P+++ ++ RIC DCHN K+ + V RE+ +RD +RFH DG+C
Sbjct: 563 KLALTFGLIATGEGIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVDGIC 622
Query: 698 SCGDYW 703
SCGDYW
Sbjct: 623 SCGDYW 628
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 221/572 (38%), Positives = 350/572 (61%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
T +++ A LR I K + Y + +GF+ + + ++ M+ +CG + AR+LFD M
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGM 297
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK 251
ERN+VS N +I + + + EA L+F + +E + + A A L + G+
Sbjct: 298 LERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGR 357
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHG 311
+H ++++G NV V +LI MY KC ++ A +F ++ +T V WN +I G+A +G
Sbjct: 358 FIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNG 417
Query: 312 YSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANS 371
+AL+ + +MR VK D FT+ +I L+ HAK H ++R ++ +
Sbjct: 418 RPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT 477
Query: 372 ALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP 431
ALVD Y+K G I AR +FD M ++V +WNA+I GYG HG G+ A+ELFE+M ++P
Sbjct: 478 ALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKP 537
Query: 432 NHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFAL 491
N VTFL+V+SACS SGL E G + F M ++ I+ HY M++LLGR G L+EA+
Sbjct: 538 NGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDF 597
Query: 492 IRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKL 551
I P K N++ A+L AC+++ N+ + AAE+L+ + P+ +V+L NIY ++
Sbjct: 598 IMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMW 657
Query: 552 KEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKH 611
++ +V ++ R+GLR P CS +E+K + H F SG +H +K+IY +++++ I +
Sbjct: 658 EKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEA 717
Query: 612 GYVPEEKTLLPDVDEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIK 671
GYVP+ +L ++ ++++LS HSEKLA++FGL+NT+ T + + ++ R+C DCHNA K
Sbjct: 718 GYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATK 777
Query: 672 LIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
I++VTGREIVVRD RFHHFK+G CSCGDYW
Sbjct: 778 YISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 166 bits (421), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 167/308 (54%)
Query: 145 SIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIA 204
S++E++++ + G + + + +++ + R G + +A R+F+ + + V + ++
Sbjct: 49 SLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLK 108
Query: 205 GMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGD 264
G D +A F+ + + + F +++ + VGK++H +K GF
Sbjct: 109 GFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSL 168
Query: 265 NVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMR 324
++F L +MY+KC + +A+ VFD M E+ V WNTI+AGY+ +G + AL++ M
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMC 228
Query: 325 DSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIE 384
+ +K T ++ + L + K+ H +R GF + ++ALVD Y+K G +E
Sbjct: 229 EENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLE 288
Query: 385 DARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS 444
AR +FD ML +NV+SWN++I Y + +EA+ +F++ML G++P V+ + L AC+
Sbjct: 289 TARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACA 348
Query: 445 RSGLSERG 452
G ERG
Sbjct: 349 DLGDLERG 356
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 145/288 (50%), Gaps = 4/288 (1%)
Query: 251 KQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALH 310
+Q+ K G F L+ ++ + GS+++A VF+ + K V ++T++ G+A
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 311 GYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVAN 370
++AL + MR V+ + F+ ++++C A L K+ H LV+ GF LD+ A
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 371 SALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMR 430
+ L + Y+K ++ +AR VFD+M ++++SWN ++AGY +G A+E+ + M ++
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 431 PNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFA 490
P+ +T ++VL A S L G EI R ++++ + G L+ A
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRS-GFDSLVNISTALVDMYAKCGSLETARQ 292
Query: 491 LIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLY--GMEPEKLS 536
L G + + W +++ A N N + +K+ G++P +S
Sbjct: 293 LFDGMLERNVVS-WNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVS 339
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 437 bits (1125), Expect = e-121, Method: Compositional matrix adjust.
Identities = 228/606 (37%), Positives = 364/606 (60%), Gaps = 7/606 (1%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S+ +L + A++ + L+ G + S+TY LI CI R++ E + ++
Sbjct: 31 SEFTRLCYQRDLPRAMKAMDSLQSHGLW-ADSATYSELIKCCISNRAVHEGNLICRHLYF 89
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
G P +++ N ++ M+V+ ++ DA +LFD+MP+RN++S +I+ + +A L
Sbjct: 90 NGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALEL 149
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
+ + + T+++++R+ G+ + + LH +K G +VFV ALID+++K
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAK 206
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMI 338
G EDA VFDEM + WN+II G+A + S+ AL+L+ M+ +G + T + +
Sbjct: 207 LGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSV 266
Query: 339 IRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
+R CT LA LE QAH +V+ + D++ N+ALVD Y K G +EDA VF++M ++V
Sbjct: 267 LRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV 324
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQS 458
I+W+ +I+G +G +EA++LFE+M +G +PN++T + VL ACS +GL E GW F+S
Sbjct: 325 ITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRS 384
Query: 459 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
M + + I P HY CMI+LLG+ G LD+A L+ + W LL ACRV N+
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMV 444
Query: 519 LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVK 578
L ++AA+K+ ++PE Y +L NIY +S K E+ +R +G++ P CSWIEV
Sbjct: 445 LAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVN 504
Query: 579 KQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVD-EQEQRVLSYHSE 637
KQ H F+ GD SH Q E+ +K+++++ ++ GYVPE +L D++ EQ + L +HSE
Sbjct: 505 KQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMEDSLRHHSE 564
Query: 638 KLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMC 697
KLA+AFGL+ ++I ++ RIC DCH KL + + R IV+RD R+HHF+DG C
Sbjct: 565 KLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYHHFQDGKC 624
Query: 698 SCGDYW 703
SCGDYW
Sbjct: 625 SCGDYW 630
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 435 bits (1118), Expect = e-121, Method: Compositional matrix adjust.
Identities = 242/697 (34%), Positives = 378/697 (54%), Gaps = 78/697 (11%)
Query: 79 ELKESSLPDTQMKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALIS 138
+L S+PD + S S I L K + +++ +F + F G S L
Sbjct: 70 DLVLQSIPDPTIYSFS----SLIYALTKAKLFTQSIGVFSRM-FSHGLIPDSHVLPNLFK 124
Query: 139 ACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVS 198
C L + + K++ +G + D +++ + M++RCG M DAR++FD M ++++V+
Sbjct: 125 VCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVT 184
Query: 199 C-----------------------------------NMIIAGMIDSGDYLEAFLLFLDLW 223
C N I++G SG + EA ++F +
Sbjct: 185 CSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI- 243
Query: 224 EEFSDCGSRTFATMIRASAG-LELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSI 282
C + + + S G E++++G+ +H +K G + V A+IDMY K G +
Sbjct: 244 HHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHV 303
Query: 283 -------------------------------EDAQGVFDEMSEKT----TVGWNTIIAGY 307
+ A +F+ E+T V W +IIAG
Sbjct: 304 YGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGC 363
Query: 308 ALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDI 367
A +G EAL+L+ EM+ +GVK +H T ++ C +A+L H + H VR ++
Sbjct: 364 AQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNV 423
Query: 368 VANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLN 427
SAL+D Y+K GRI ++ VF+ M KN++ WN+L+ G+ HG+ +E + +FE ++
Sbjct: 424 HVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT 483
Query: 428 GMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDE 487
++P+ ++F ++LSAC + GL++ GW+ F+ MS ++ IKPR HY+CM+ LLGR G L E
Sbjct: 484 RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQE 543
Query: 488 AFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNS 547
A+ LI+ PF+ +W ALL +CR+ N++L + AAEKL+ +EPE YV+L NIY +
Sbjct: 544 AYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAA 603
Query: 548 SGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLE 607
G E + + GL+ P CSWI+VK + + L+GD+SH Q +I K+D + E
Sbjct: 604 KGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKE 663
Query: 608 ISKHGYVPEEKTLLPDVDEQEQ-RVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDC 666
+ K G+ P L DV+EQEQ ++L HSEKLAV FGL+NT D TPLQ++++ RIC DC
Sbjct: 664 MRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDC 723
Query: 667 HNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
H IK I+ GREI +RD +RFHHFKDG+CSCGD+W
Sbjct: 724 HAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/517 (21%), Positives = 208/517 (40%), Gaps = 117/517 (22%)
Query: 156 MLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEA 215
+L +G + D Y+ +++ + DA + +P+ + S + +I + + + ++
Sbjct: 41 ILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLFTQS 100
Query: 216 FLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDM 275
+F ++ S + + A L VGKQ+H + G + FV ++ M
Sbjct: 101 IGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHM 160
Query: 276 YSKCGSIEDAQGVFDEMSEK-----------------------------------TTVGW 300
Y +CG + DA+ VFD MS+K V W
Sbjct: 161 YMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSW 220
Query: 301 NTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVR 360
N I++G+ GY +EA+ ++ ++ G D T S ++ L + H +++
Sbjct: 221 NGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIK 280
Query: 361 HGFGLDIVANSALVDFYSKWGRIEDARHVFDKM------LCK------------------ 396
G D SA++D Y K G + +F++ +C
Sbjct: 281 QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEM 340
Query: 397 -----------NVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSR 445
NV+SW ++IAG +G+ EA+ELF +M + G++PNHVT ++L AC
Sbjct: 341 FELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGN 400
Query: 446 SGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNM-- 503
G R H + + A +I++ + G ++ + + P TKN+
Sbjct: 401 IAALGHGRSTHGFAVRVHLLDNVHVGSA-LIDMYAKCGRINLSQIVFNMMP---TKNLVC 456
Query: 504 -----------------------------------WAALLTACRVNGNLELG----KFAA 524
+ +LL+AC G + G K +
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 525 EKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTL 561
E+ YG++P +L +Y ++N+ +GKL+EA ++I+ +
Sbjct: 517 EE-YGIKP-RLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHG 311
Q H+ LK G ++ ++S LI YS DA V + + T ++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 312 YSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANS 371
+++ ++ M G+ D + ++C L++ + KQ H G +D
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQG 155
Query: 372 ALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP 431
++ Y + GR+ DAR VFD+M K+V++ +AL+ Y G EE V + +M +G+
Sbjct: 156 SMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEA 215
Query: 432 NHVTFLAVLSACSRSGLSERGWEIFQSM 459
N V++ +LS +RSG + +FQ +
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 87/225 (38%), Gaps = 19/225 (8%)
Query: 351 AKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGN 410
QAHA +++ G D ++ L+ YS + DA V + + S+++LI
Sbjct: 34 TTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTK 93
Query: 411 HGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEI-----FQSMSRDHKI 465
+++ +F +M +G+ P+ + C+ + G +I + D +
Sbjct: 94 AKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFV 153
Query: 466 KPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAE 525
+ H M GR G + F + T +ALL A G LE
Sbjct: 154 QGSMFH---MYMRCGRMGDARKVFDRMSDKDVVTC----SALLCAYARKGCLEE---VVR 203
Query: 526 KLYGMEPEKLSNYVV----LLNIYNSSGKLKEAAEVIRTLRRKGL 566
L ME + +V +L+ +N SG KEA + + + G
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGF 248
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 431 bits (1108), Expect = e-120, Method: Compositional matrix adjust.
Identities = 225/585 (38%), Positives = 346/585 (59%), Gaps = 10/585 (1%)
Query: 120 LEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCG 179
L FE VGS L+ + I + K+VF Y L + + M N ++ + CG
Sbjct: 168 LGFESYLLVGS----PLLYMYANVGCISDAKKVF-YGLD---DRNTVMYNSLMGGLLACG 219
Query: 180 MMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIR 239
M+ DA +LF M E++ VS +I G+ +G EA F ++ + F +++
Sbjct: 220 MIEDALQLFRGM-EKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLP 278
Query: 240 ASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVG 299
A GL I+ GKQ+H+C ++ F D+++V ALIDMY KC + A+ VFD M +K V
Sbjct: 279 ACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVS 338
Query: 300 WNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLV 359
W ++ GY G +EEA+ ++ +M+ SG+ DH+T I C ++SLE Q H +
Sbjct: 339 WTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI 398
Query: 360 RHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVE 419
G + +++LV Y K G I+D+ +F++M ++ +SW A+++ Y GR E ++
Sbjct: 399 TSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQ 458
Query: 420 LFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELL 479
LF++M+ +G++P+ VT V+SACSR+GL E+G F+ M+ ++ I P HY+CMI+L
Sbjct: 459 LFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLF 518
Query: 480 GREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYV 539
R G L+EA I G PF W LL+ACR GNLE+GK+AAE L ++P + Y
Sbjct: 519 SRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYT 578
Query: 540 VLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYR 599
+L +IY S GK A++ R +R K ++ P SWI+ K + H F + D+S +IY
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYA 638
Query: 600 KVDRMMLEISKHGYVPEEKTLLPDVDEQEQ-RVLSYHSEKLAVAFGLINTSDWTPLQIVQ 658
K++ + +I +GY P+ + DV+E + ++L+YHSE+LA+AFGLI P+++ +
Sbjct: 639 KLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRVGK 698
Query: 659 SHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+ R+C DCHNA K I+ VTGREI+VRDA RFH FKDG CSCGD+W
Sbjct: 699 NLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 181/357 (50%), Gaps = 6/357 (1%)
Query: 90 MKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREV 149
M+K S + I+ L N +EA+E F ++ + G + + +++ AC GL +I E
Sbjct: 231 MEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQ-GLKMDQYPFGSVLPACGGLGAINEG 289
Query: 150 KRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDS 209
K++ + ++ T F+ +Y+ + ++ M+ +C + A+ +FD M ++N+VS ++ G +
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 210 GDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVS 269
G EA +FLD+ D T I A A + + G Q H A+ G V VS
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 270 CALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVK 329
+L+ +Y KCG I+D+ +F+EM+ + V W +++ YA G + E + L+ +M G+K
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLK 469
Query: 330 MDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGL--DIVANSALVDFYSKWGRIEDAR 387
D T + +I C+R A L Q + L+ +G+ I S ++D +S+ GR+E+A
Sbjct: 470 PDGVTLTGVISACSR-AGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAM 528
Query: 388 HVFDKM-LCKNVISWNALIAGYGNHGRGEEAVELFEQML-LNGMRPNHVTFLAVLSA 442
+ M + I W L++ N G E E ++ L+ P T L+ + A
Sbjct: 529 RFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYA 585
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 430 bits (1106), Expect = e-119, Method: Compositional matrix adjust.
Identities = 228/618 (36%), Positives = 364/618 (58%), Gaps = 16/618 (2%)
Query: 101 IEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTG 160
+ L N++ EALE + EG + T +++ AC L +R K + +Y L G
Sbjct: 274 LSSLCQNEQLLEALEYLREMVLEG-VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 161 -FEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLF 219
+ + ++ + ++ M+ C ++ RR+FD M +R + N +IAG + EA LLF
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 220 LDLWEEFSD-CGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
+ + E S T A ++ A S + +H +K G + FV L+DMYS+
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSR 452
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRD-----------SG 327
G I+ A +F +M ++ V WNT+I GY + E+AL L ++M++
Sbjct: 453 LGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVS 512
Query: 328 VKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDAR 387
+K + T I+ C L++L K+ HA +++ D+ SALVD Y+K G ++ +R
Sbjct: 513 LKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSR 572
Query: 388 HVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSG 447
VFD++ KNVI+WN +I YG HG G+EA++L M++ G++PN VTF++V +ACS SG
Sbjct: 573 KVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSG 632
Query: 448 LSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTK-NMWAA 506
+ + G IF M D+ ++P + HYAC+++LLGR G + EA+ L+ P K W++
Sbjct: 633 MVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSS 692
Query: 507 LLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGL 566
LL A R++ NLE+G+ AA+ L +EP S+YV+L NIY+S+G +A EV R ++ +G+
Sbjct: 693 LLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGV 752
Query: 567 RMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDE 626
R P CSWIE + H F++GD SH Q++++ ++ + + K GYVP+ +L +V+E
Sbjct: 753 RKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Query: 627 QEQRV-LSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRD 685
E+ + L HSEKLA+AFG++NTS T +++ ++ R+C DCH A K I+ + REI++RD
Sbjct: 813 DEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRD 872
Query: 686 ASRFHHFKDGMCSCGDYW 703
RFH FK+G CSCGDYW
Sbjct: 873 VRRFHRFKNGTCSCGDYW 890
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 177/360 (49%), Gaps = 18/360 (5%)
Query: 125 GFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPD-LYMRNRVLLMHVRCGMMID 183
G + + AL+ A L+ + K++ +++ G+ D + + N ++ ++ +CG
Sbjct: 92 GIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGA 151
Query: 184 ARRLFDEMPERNLVSCNMIIAGMIDSGDY---LEAFLLFLDLWEEFSDCGSRTFATMIRA 240
++FD + ERN VS N +I+ + + LEAF LD E + S T +++ A
Sbjct: 152 VYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLD---ENVEPSSFTLVSVVTA 208
Query: 241 SAGLEL---ISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTT 297
+ L + + +GKQ+H+ L+ G N F+ L+ MY K G + ++ + +
Sbjct: 209 CSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDL 267
Query: 298 VGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAG 357
V WNT+++ + EAL+ EM GV+ D FT S ++ C+ L L K+ HA
Sbjct: 268 VTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAY 327
Query: 358 LVRHG-FGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEE 416
+++G + SALVD Y ++ R VFD M + + WNA+IAGY + +E
Sbjct: 328 ALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKE 387
Query: 417 AVELFEQMLLN-GMRPNHVTFLAVLSACSRSGLSER-----GWEIFQSMSRDHKIKPRAM 470
A+ LF M + G+ N T V+ AC RSG R G+ + + + RD ++ M
Sbjct: 388 ALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLM 447
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 3/138 (2%)
Query: 315 EALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLD--IVANSA 372
EA+ Y +M G+K D++ F +++ L +E KQ HA + + G+G+D VAN+
Sbjct: 80 EAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANT- 138
Query: 373 LVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPN 432
LV+ Y K G VFD++ +N +SWN+LI+ + + E A+E F ML + P+
Sbjct: 139 LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPS 198
Query: 433 HVTFLAVLSACSRSGLSE 450
T ++V++ACS + E
Sbjct: 199 SFTLVSVVTACSNLPMPE 216
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 428 bits (1101), Expect = e-119, Method: Compositional matrix adjust.
Identities = 224/648 (34%), Positives = 373/648 (57%), Gaps = 49/648 (7%)
Query: 101 IEKLVLNKRYREALELF-------EILEFEG-GFDVGSSTYDALISACIGLRSIREVKRV 152
+E+L R+ EA+++ E ++ G +STY LI C R++ E K+V
Sbjct: 48 VERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKV 107
Query: 153 FSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDY 212
++ ++GF P + + NR+L M+ +CG ++DAR++FDEMP R+L S N+++ G + G
Sbjct: 108 HEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLL 167
Query: 213 LEAFLLFLDLWEEFSDCGSRTFATMI-------RASAGLELISV---------------- 249
EA LF +E ++ S ++ M+ + L L S+
Sbjct: 168 EEARKLF----DEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSI 223
Query: 250 -------------GKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKT 296
GK++H ++ G + + +L+DMY KCG I++A+ +FD++ EK
Sbjct: 224 AVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKD 283
Query: 297 TVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHA 356
V W ++I Y E L+ E+ S + + +TF+ ++ C L + E KQ H
Sbjct: 284 VVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHG 343
Query: 357 GLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEE 416
+ R GF A+S+LVD Y+K G IE A+HV D +++SW +LI G +G+ +E
Sbjct: 344 YMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDE 403
Query: 417 AVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMI 476
A++ F+ +L +G +P+HVTF+ VLSAC+ +GL E+G E F S++ H++ + HY C++
Sbjct: 404 ALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLV 463
Query: 477 ELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLS 536
+LL R G ++ ++I P K +K +WA++L C GN++L + AA++L+ +EPE
Sbjct: 464 DLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPV 523
Query: 537 NYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKE 596
YV + NIY ++GK +E ++ + ++ G+ P SW E+K++ HVF++ D SH +
Sbjct: 524 TYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHPMYNQ 583
Query: 597 IYRKVDRMMLEISKHGYVPEEKTLLPDV-DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQ 655
I + + ++ + GYVP +L DV DEQ++ L YHSEKLAVAF +++T + T ++
Sbjct: 584 IVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAILSTEEGTAIK 643
Query: 656 IVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+ ++ R C DCH AIK I+ +T R+I VRD++RFH F++G CSCGDYW
Sbjct: 644 VFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 426 bits (1096), Expect = e-118, Method: Compositional matrix adjust.
Identities = 223/621 (35%), Positives = 366/621 (58%), Gaps = 18/621 (2%)
Query: 84 SLPDTQMKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGL 143
S+ D +K + + V N + EA LF+ E + +++ L+ +
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRE-----NWALVSWNCLLGGFVKK 232
Query: 144 RSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMII 203
+ I E ++ F M D+ N ++ + + G + +AR+LFDE P +++ + ++
Sbjct: 233 KKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMV 288
Query: 204 AGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFG 263
+G I + EA LF ++ + ++ M+ E + + K+L
Sbjct: 289 SGYIQNRMVEEARELF----DKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMP----C 340
Query: 264 DNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEM 323
NV +I Y++CG I +A+ +FD+M ++ V W +IAGY+ G+S EAL L+ +M
Sbjct: 341 RNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQM 400
Query: 324 RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRI 383
G +++ +FS + C + +LE KQ H LV+ G+ +AL+ Y K G I
Sbjct: 401 EREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSI 460
Query: 384 EDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSAC 443
E+A +F +M K+++SWN +IAGY HG GE A+ FE M G++P+ T +AVLSAC
Sbjct: 461 EEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSAC 520
Query: 444 SRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNM 503
S +GL ++G + F +M++D+ + P + HYACM++LLGR GLL++A L++ PF+ +
Sbjct: 521 SHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAI 580
Query: 504 WAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRR 563
W LL A RV+GN EL + AA+K++ MEPE YV+L N+Y SSG+ + ++ +R
Sbjct: 581 WGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRD 640
Query: 564 KGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPD 623
KG++ +P SWIE++ + H F GD+ H + EI+ ++ + L + K GYV + +L D
Sbjct: 641 KGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHD 700
Query: 624 VDEQE-QRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIV 682
V+E+E +R++ YHSE+LAVA+G++ S P++++++ R+C DCHNAIK +A +TGR I+
Sbjct: 701 VEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLII 760
Query: 683 VRDASRFHHFKDGMCSCGDYW 703
+RD +RFHHFKDG CSCGDYW
Sbjct: 761 LRDNNRFHHFKDGSCSCGDYW 781
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 165/361 (45%), Gaps = 63/361 (17%)
Query: 169 NRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSD 228
N ++ ++R G AR+LFDEMPER+LVS N++I G + + + +A LF ++ E
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF-EIMPERDV 157
Query: 229 CGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGV 288
C T ++ Y++ G ++DA+ V
Sbjct: 158 CSWNT--------------------------------------MLSGYAQNGCVDDARSV 179
Query: 289 FDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASL 348
FD M EK V WN +++ Y + EEA L+ + + +++ ++ + +
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGFVKKKKI 235
Query: 349 EHAKQAHAGL-VRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAG 407
A+Q + VR D+V+ + ++ Y++ G+I++AR +FD+ ++V +W A+++G
Sbjct: 236 VEARQFFDSMNVR-----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 408 YGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKP 467
Y + EEA ELF++M N V++ A+L+ + E E+F M +
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN---- 342
Query: 468 RAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKL 527
+ MI + G + EA L P K WAA++ +G+ F A +L
Sbjct: 343 -VSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAGYSQSGH----SFEALRL 396
Query: 528 Y 528
+
Sbjct: 397 F 397
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 142/309 (45%), Gaps = 35/309 (11%)
Query: 230 GSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCAL-IDMYSKCGSIEDAQGV 288
G+ F ++ RA+ S K L C GD+ + I Y + G +A V
Sbjct: 33 GAANFHSLKRATQTQIQKSQTKPLLKC------GDSDIKEWNVAISSYMRTGRCNEALRV 86
Query: 289 FDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASL 348
F M ++V +N +I+GY +G E A L+ EM + D +++++I+ R +L
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNL 142
Query: 349 EHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGY 408
A++ + D+ + + ++ Y++ G ++DAR VFD+M KN +SWNAL++ Y
Sbjct: 143 GKARELFEIMPER----DVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAY 198
Query: 409 GNHGRGEEAVELFEQMLLNGMRPNH--VTFLAVLSACSRSGLSERGWEIFQSMS-RDHKI 465
+ + EEA LF+ R N V++ +L + + F SM+ RD
Sbjct: 199 VQNSKMEEACMLFKS------RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD--- 249
Query: 466 KPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAE 525
+ + +I + G +DEA L +P + W A+++ N +E A
Sbjct: 250 ---VVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT-WTAMVSGYIQNRMVE----EAR 301
Query: 526 KLYGMEPEK 534
+L+ PE+
Sbjct: 302 ELFDKMPER 310
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 224/598 (37%), Positives = 352/598 (58%), Gaps = 4/598 (0%)
Query: 107 NKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLY 166
N+ Y E++++F L E + ++T ++ A L+ +R ++ S TG Y
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 167 MRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEF 226
+ + ++ +CG + LF E + ++V+ N +I G +G+ + LF +L
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 227 SDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQ 286
+ S T +++ S L LI +H LK F + VS AL +YSK IE A+
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLIYA---IHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 287 GVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLA 346
+FDE EK+ WN +I+GY +G +E+A+ L+ EM+ S + T + I+ C +L
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLG 434
Query: 347 SLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIA 406
+L K H + F I ++AL+ Y+K G I +AR +FD M KN ++WN +I+
Sbjct: 435 ALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMIS 494
Query: 407 GYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIK 466
GYG HG+G+EA+ +F +ML +G+ P VTFL VL ACS +GL + G EIF SM + +
Sbjct: 495 GYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFE 554
Query: 467 PRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEK 526
P HYACM+++LGR G L A I + ++W LL ACR++ + L + +EK
Sbjct: 555 PSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEK 614
Query: 527 LYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLS 586
L+ ++P+ + +V+L NI+++ +AA V +T +++ L P + IE+ + PHVF S
Sbjct: 615 LFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTS 674
Query: 587 GDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRVL-SYHSEKLAVAFGL 645
GDQSH Q KEIY K++++ ++ + GY PE + L DV+E+E+ ++ HSE+LA+AFGL
Sbjct: 675 GDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHSERLAIAFGL 734
Query: 646 INTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
I T T ++I+++ R+C DCH KLI+ +T R IVVRDA+RFHHFKDG+CSCGDYW
Sbjct: 735 IATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 172 bits (437), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 129/465 (27%), Positives = 225/465 (48%), Gaps = 21/465 (4%)
Query: 106 LNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDL 165
+N+ +L +F L SSTY ISA G R R + + + G + +L
Sbjct: 95 VNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSEL 154
Query: 166 YMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEE 225
+ + ++ M+ + + DAR++FD MPE++ + N +I+G + Y+E+ +F DL E
Sbjct: 155 LLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINE 214
Query: 226 F-SDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIED 284
+ + T ++ A A L+ + +G Q+HS A K G + +V I +YSKCG I+
Sbjct: 215 SCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKM 274
Query: 285 AQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTR 344
+F E + V +N +I GY +G +E +L L+ E+ SG ++ T ++ +
Sbjct: 275 GSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGH 334
Query: 345 LASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNAL 404
L + H ++ F ++AL YSK IE AR +FD+ K++ SWNA+
Sbjct: 335 LMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAM 391
Query: 405 IAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSG-LSERGWEIFQSMSRDH 463
I+GY +G E+A+ LF +M + PN VT +LSAC++ G LS W + R
Sbjct: 392 ISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKW--VHDLVRST 449
Query: 464 KIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKN--MWAALLTACRVNGNLELGK 521
+ +I + + G + EA L T KN W +++ ++G G+
Sbjct: 450 DFESSIYVSTALIGMYAKCGSIAEARRLF---DLMTKKNEVTWNTMISGYGLHGQ---GQ 503
Query: 522 FAAEKLY-----GMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTL 561
A Y G+ P ++ ++ +L + +G +KE E+ ++
Sbjct: 504 EALNIFYEMLNSGITPTPVT-FLCVLYACSHAGLVKEGDEIFNSM 547
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 113/512 (22%), Positives = 219/512 (42%), Gaps = 53/512 (10%)
Query: 145 SIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIA 204
SI + + + ++ GF D+ + ++ G + AR +F + ++ N+++
Sbjct: 32 SISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMR 91
Query: 205 GMIDSGDYLEAFLLFLDLWEEFS-DCGSRTFATMIRASAGLELISVGKQLHSCALKMGFG 263
G + + +F L + S T+A I A++G G+ +H A+ G
Sbjct: 92 GFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCD 151
Query: 264 DNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEM 323
+ + ++ MY K +EDA+ VFD M EK T+ WNT+I+GY + E++ ++ ++
Sbjct: 152 SELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDL 211
Query: 324 -RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHG-FGLDIVANSALVDFYSKWG 381
+S ++D T I+ L L Q H+ + G + D V + + YSK G
Sbjct: 212 INESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVL-TGFISLYSKCG 270
Query: 382 RIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLS 441
+I+ +F + +++++NA+I GY ++G E ++ LF++++L+G R T ++++
Sbjct: 271 KIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVP 330
Query: 442 AC-------------------SRSGLSERGWEIFQSMSR--------DHKIKPRAMHYAC 474
S + +S ++ ++ D + +
Sbjct: 331 VSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNA 390
Query: 475 MIELLGREGLLDEAFALIR---GAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGME 531
MI + GL ++A +L R + F +L+AC G L LGK+ + + +
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 532 PEKLSNYV--VLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQ 589
E S YV L+ +Y G + EA + + +K +W + +SG
Sbjct: 451 FES-SIYVSTALIGMYAKCGSIAEARRLFDLMTKKN-----EVTW-------NTMISGYG 497
Query: 590 SHVQTKEIYRKVDRMMLEISKHGYVPEEKTLL 621
H Q +E + E+ G P T L
Sbjct: 498 LHGQGQEAL----NIFYEMLNSGITPTPVTFL 525
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Query: 344 RLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNA 403
R S+ H Q HA ++ HGF DI + L S G I AR +F + +V +N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 404 LIAGYGNHGRGEEAVELFEQMLLN-GMRPNHVTFLAVLSACS 444
L+ G+ + ++ +F + + ++PN T+ +SA S
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS 130
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 216/583 (37%), Positives = 350/583 (60%), Gaps = 10/583 (1%)
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDE 190
S++ I AC L I K+ G++ D+++ + +++M+ CG + DAR++FDE
Sbjct: 77 SSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDE 136
Query: 191 MPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTF------ATMIRASAGL 244
+P+RN+VS +I G +G+ L+A LF DL + +D F ++I A + +
Sbjct: 137 IPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRV 196
Query: 245 ELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCG--SIEDAQGVFDEMSEKTTVGWNT 302
+ + +HS +K GF V V L+D Y+K G + A+ +FD++ +K V +N+
Sbjct: 197 PAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNS 256
Query: 303 IIAGYALHGYSEEALDLYYEM-RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRH 361
I++ YA G S EA +++ + ++ V + T S ++ + +L K H ++R
Sbjct: 257 IMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM 316
Query: 362 GFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELF 421
G D++ ++++D Y K GR+E AR FD+M KNV SW A+IAGYG HG +A+ELF
Sbjct: 317 GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELF 376
Query: 422 EQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGR 481
M+ +G+RPN++TF++VL+ACS +GL GW F +M ++P HY CM++LLGR
Sbjct: 377 PAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGR 436
Query: 482 EGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVL 541
G L +A+ LI+ K +W++LL ACR++ N+EL + + +L+ ++ Y++L
Sbjct: 437 AGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLL 496
Query: 542 LNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKV 601
+IY +G+ K+ V ++ +GL P S +E+ + HVFL GD+ H Q ++IY +
Sbjct: 497 SHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFL 556
Query: 602 DRMMLEISKHGYVPEEKTLLPDVDEQEQRV-LSYHSEKLAVAFGLINTSDWTPLQIVQSH 660
+ ++ + GYV ++ DVDE+E+ + L HSEKLA+AFG++NT + + +V++
Sbjct: 557 AELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNL 616
Query: 661 RICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
R+C DCHN IKLI+ + RE VVRDA RFHHFKDG CSCGDYW
Sbjct: 617 RVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 142 bits (357), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 189/372 (50%), Gaps = 22/372 (5%)
Query: 187 LFDEMPER-NLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLE 245
LF+ ++ ++ S N +IA + SGD EA L F + + +F I+A + L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 246 LISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIA 305
I GKQ H A G+ ++FVS ALI MYS CG +EDA+ VFDE+ ++ V W ++I
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIR 150
Query: 306 GYALHGYSEEALDLYYEM------RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLV 359
GY L+G + +A+ L+ ++ D + +D +I C+R+ + + H+ ++
Sbjct: 151 GYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVI 210
Query: 360 RHGFGLDIVANSALVDFYSKWGR--IEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEA 417
+ GF + + L+D Y+K G + AR +FD+++ K+ +S+N++++ Y G EA
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEA 270
Query: 418 VELFEQMLLNGMRP-NHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMI 476
E+F +++ N + N +T VL A S SG G I + R ++ + +I
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIR-MGLEDDVIVGTSII 329
Query: 477 ELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGN----LELGKFAAEKLYGMEP 532
++ + G ++ A K ++ W A++ ++G+ LEL F A G+ P
Sbjct: 330 DMYCKCGRVETARKAFDRMKNKNVRS-WTAMIAGYGMHGHAAKALEL--FPAMIDSGVRP 386
Query: 533 EKLSNYVVLLNI 544
NY+ +++
Sbjct: 387 ----NYITFVSV 394
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 95/212 (44%), Gaps = 12/212 (5%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
EA E+F L + T ++ A ++R K + ++ G E D+ + +
Sbjct: 269 EAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSI 328
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
+ M+ +CG + AR+ FD M +N+ S +IAG G +A L+L+ D G
Sbjct: 329 IDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKA----LELFPAMIDSGV 384
Query: 232 R----TFATMIRA--SAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDA 285
R TF +++ A AGL + + ++ + G + ++D+ + G ++ A
Sbjct: 385 RPNYITFVSVLAACSHAGLH-VEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKA 443
Query: 286 QGVFDEMSEKT-TVGWNTIIAGYALHGYSEEA 316
+ M K ++ W++++A +H E A
Sbjct: 444 YDLIQRMKMKPDSIIWSSLLAACRIHKNVELA 475
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/603 (37%), Positives = 354/603 (58%), Gaps = 13/603 (2%)
Query: 111 REALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNR 170
REA+ F + GF+ T ++ SAC L ++ K++ S+ + +G D+
Sbjct: 251 REAIRFFLDMVL-SGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECS 307
Query: 171 VLLMHVRC---GMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDY-LEAFLLFLDLWEE- 225
++ M+ +C G + D R++FD M + +++S +I G + + + EA LF ++ +
Sbjct: 308 LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQG 367
Query: 226 FSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDA 285
+ TF++ +A L VGKQ+ A K G N V+ ++I M+ K +EDA
Sbjct: 368 HVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDA 427
Query: 286 QGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRL 345
Q F+ +SEK V +NT + G + E+A L E+ + + + FTF+ ++ +
Sbjct: 428 QRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANV 487
Query: 346 ASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALI 405
S+ +Q H+ +V+ G + +AL+ YSK G I+ A VF+ M +NVISW ++I
Sbjct: 488 GSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMI 547
Query: 406 AGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKI 465
G+ HG +E F QM+ G++PN VT++A+LSACS GL GW F SM DHKI
Sbjct: 548 TGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKI 607
Query: 466 KPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAE 525
KP+ HYACM++LL R GLL +AF I PF+ +W L ACRV+ N ELGK AA
Sbjct: 608 KPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAAR 667
Query: 526 KLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFL 585
K+ ++P + + Y+ L NIY +GK +E+ E+ R ++ + L CSWIEV + H F
Sbjct: 668 KILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFY 727
Query: 586 SGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDV-----DEQEQRVLSYHSEKLA 640
GD +H +IY ++DR++ EI + GYVP+ +L + + +++R+L HSEK+A
Sbjct: 728 VGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIA 787
Query: 641 VAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCG 700
VAFGLI+TS P+++ ++ R+C DCHNA+K I+ V+GREIV+RD +RFHHFKDG CSC
Sbjct: 788 VAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCN 847
Query: 701 DYW 703
DYW
Sbjct: 848 DYW 850
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 178/343 (51%), Gaps = 12/343 (3%)
Query: 111 REALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNR 170
R A+ +++ +G + S T+ +L+ +CI R R K V + ++ EPD + N
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 171 VLLMHVRCGMMIDARRLFDEM---PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFS 227
++ ++ + G A +F+ M +R++VS + ++A ++G L+A +F++ E
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 228 DCGSRTFATMIRASAGLELISVGKQLHSCALKMG-FGDNVFVSCALIDMYSKC-GSIEDA 285
+ +IRA + + + VG+ +K G F +V V C+LIDM+ K S E+A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 286 QGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRL 345
VFD+MSE V W +I G+ EA+ + +M SG + D FT S + C L
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 346 ASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKW---GRIEDARHVFDKMLCKNVISWN 402
+L KQ H+ +R G D+ +LVD Y+K G ++D R VFD+M +V+SW
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 403 ALIAGY-GNHGRGEEAVELFEQMLLNG-MRPNHVTFLAVLSAC 443
ALI GY N EA+ LF +M+ G + PNH TF + AC
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKAC 383
Score = 90.5 bits (223), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 135/297 (45%), Gaps = 16/297 (5%)
Query: 231 SRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFD 290
S TF++++++ +GK +H+ ++ + + +LI +YSK G A+ VF+
Sbjct: 62 SVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFE 121
Query: 291 EM---SEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLAS 347
M ++ V W+ ++A Y +G +A+ ++ E + G+ + + ++ +IR C+
Sbjct: 122 TMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF 181
Query: 348 LEHAKQAHAGLVRHG-FGLDIVANSALVDFYSKW-GRIEDARHVFDKMLCKNVISWNALI 405
+ + L++ G F D+ +L+D + K E+A VFDKM NV++W +I
Sbjct: 182 VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMI 241
Query: 406 AGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSR-----SGLSERGWEIFQSMS 460
G EA+ F M+L+G + T +V SAC+ G W I +
Sbjct: 242 TRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLV 301
Query: 461 RDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNL 517
D + M+ C +G +D+ + + + W AL+T N NL
Sbjct: 302 DDVECSLVDMYAKC-----SADGSVDDCRKVFDRMEDHSVMS-WTALITGYMKNCNL 352
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 106/246 (43%), Gaps = 44/246 (17%)
Query: 316 ALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVD 375
ALDL RD MD TFS +++ C R K HA L+ D V ++L+
Sbjct: 48 ALDLM--ARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 376 FYSKWGRIEDARHVFDKML---CKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPN 432
YSK G A VF+ M ++V+SW+A++A YGN+GR +A+++F + L G+ PN
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 433 HVTFLAVLSACSRSGLS-------------------------------------ERGWEI 455
+ AV+ ACS S E +++
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKV 225
Query: 456 FQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNG 515
F MS + + M CM RE + F + + F++ K +++ +AC
Sbjct: 226 FDKMSELNVVTWTLMITRCMQMGFPREAI--RFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 516 NLELGK 521
NL LGK
Sbjct: 284 NLSLGK 289
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust.
Identities = 225/613 (36%), Positives = 363/613 (59%), Gaps = 34/613 (5%)
Query: 125 GFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDA 184
G S T+ ++ +C ++ +E +++ ++L G + DLY+ ++ M+V+ G + DA
Sbjct: 129 GLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDA 188
Query: 185 -------------------------------RRLFDEMPERNLVSCNMIIAGMIDSGDYL 213
++LFDE+P +++VS N +I+G ++G+Y
Sbjct: 189 HKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYK 248
Query: 214 EAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALI 273
EA LF D+ + T T++ A A I +G+Q+H GFG N+ + ALI
Sbjct: 249 EALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALI 308
Query: 274 DMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHF 333
D+YSKCG +E A G+F+ + K + WNT+I GY +EAL L+ EM SG +
Sbjct: 309 DLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDV 368
Query: 334 TFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVAN--SALVDFYSKWGRIEDARHVFD 391
T I+ C L +++ + H + + G+ ++ ++L+D Y+K G IE A VF+
Sbjct: 369 TMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN 428
Query: 392 KMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSER 451
+L K++ SWNA+I G+ HGR + + +LF +M G++P+ +TF+ +LSACS SG+ +
Sbjct: 429 SILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDL 488
Query: 452 GWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTAC 511
G IF++M++D+K+ P+ HY CMI+LLG GL EA +I + +W +LL AC
Sbjct: 489 GRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKAC 548
Query: 512 RVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPA 571
+++GN+ELG+ AE L +EPE +YV+L NIY S+G+ E A+ L KG++ +P
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 572 CSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQ-EQR 630
CS IE+ H F+ GD+ H + +EIY ++ M + + K G+VP+ +L +++E+ ++
Sbjct: 609 CSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEG 668
Query: 631 VLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFH 690
L +HSEKLA+AFGLI+T T L IV++ R+C +CH A KLI+ + REI+ RD +RFH
Sbjct: 669 ALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFH 728
Query: 691 HFKDGMCSCGDYW 703
HF+DG+CSC DYW
Sbjct: 729 HFRDGVCSCNDYW 741
Score = 169 bits (428), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 231/473 (48%), Gaps = 43/473 (9%)
Query: 135 ALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVL---LMHVRCGMMIDARRLFDEM 191
+L+ C L+S+R + + M+ G Y ++++ ++ + A +F +
Sbjct: 38 SLLHNCKTLQSLRIIH---AQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI 94
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK 251
E NL+ N + G S D + A L++ + S TF ++++ A + G+
Sbjct: 95 QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQ 154
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDA-------------------------- 285
Q+H LK+G +++V +LI MY + G +EDA
Sbjct: 155 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRG 214
Query: 286 -----QGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIR 340
Q +FDE+ K V WN +I+GYA G +EAL+L+ +M + V+ D T ++
Sbjct: 215 YIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVS 274
Query: 341 ICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS 400
C + S+E +Q H + HGFG ++ +AL+D YSK G +E A +F+++ K+VIS
Sbjct: 275 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 334
Query: 401 WNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMS 460
WN LI GY + +EA+ LF++ML +G PN VT L++L AC+ G + G I +
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 394
Query: 461 RDHK-IKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNG--NL 517
+ K + + +I++ + G ++ A + K+ + W A++ ++G +
Sbjct: 395 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSS-WNAMIFGFAMHGRADA 453
Query: 518 ELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLP 570
F+ + G++P+ ++ +V LL+ + SG L + RT+ + +M P
Sbjct: 454 SFDLFSRMRKIGIQPDDIT-FVGLLSACSHSGMLDLGRHIFRTMTQD-YKMTP 504
Score = 121 bits (303), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 169/399 (42%), Gaps = 87/399 (21%)
Query: 238 IRASAGLELISVGKQL------HSCALKMGFGDNVFVSCALIDMYSKCGSIED---AQGV 288
IR L L+ K L H+ +K+G + + LI+ E A V
Sbjct: 31 IRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISV 90
Query: 289 FDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASL 348
F + E + WNT+ G+AL AL LY M G+ + +TF +++ C + +
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 349 EHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDK---------------- 392
+ +Q H +++ G LD+ +++L+ Y + GR+EDA VFDK
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGY 210
Query: 393 ---------------MLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFL 437
+ K+V+SWNA+I+GY G +EA+ELF+ M+ +RP+ T +
Sbjct: 211 ASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMV 270
Query: 438 AVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPF 497
V+SAC++SG E G ++ + DH +I+L + G L+ A L P+
Sbjct: 271 TVVSACAQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 498 KTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEV 557
K ++ N +G + LY KEA +
Sbjct: 330 KDV------------ISWNTLIGGYTHMNLY-----------------------KEALLL 354
Query: 558 IRTLRRKG--------LRMLPACSW---IEVKKQPHVFL 585
+ + R G L +LPAC+ I++ + HV++
Sbjct: 355 FQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 222/541 (41%), Positives = 326/541 (60%), Gaps = 11/541 (2%)
Query: 164 DLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLW 223
D Y RNR M +A LF E +LV+ N ++AG S D + LF +
Sbjct: 460 DAYSRNRC---------MKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMH 509
Query: 224 EEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIE 283
++ T AT+ + L I+ GKQ+H+ A+K G+ +++VS ++DMY KCG +
Sbjct: 510 KQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMS 569
Query: 284 DAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICT 343
AQ FD + V W T+I+G +G E A ++ +MR GV D FT + + + +
Sbjct: 570 AAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASS 629
Query: 344 RLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNA 403
L +LE +Q HA ++ D ++LVD Y+K G I+DA +F ++ N+ +WNA
Sbjct: 630 CLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNA 689
Query: 404 LIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDH 463
++ G HG G+E ++LF+QM G++P+ VTF+ VLSACS SGL ++ +SM D+
Sbjct: 690 MLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDY 749
Query: 464 KIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFA 523
IKP HY+C+ + LGR GL+ +A LI + + +M+ LL ACRV G+ E GK
Sbjct: 750 GIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRV 809
Query: 524 AEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHV 583
A KL +EP S YV+L N+Y ++ K E ++ ++ P SWIEVK + H+
Sbjct: 810 ATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHI 869
Query: 584 FLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQE-QRVLSYHSEKLAVA 642
F+ D+S+ QT+ IYRKV M+ +I + GYVPE L DV+E+E +R L YHSEKLAVA
Sbjct: 870 FVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVA 929
Query: 643 FGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDY 702
FGL++T TP++++++ R+C DCHNA+K IA V REIV+RDA+RFH FKDG+CSCGDY
Sbjct: 930 FGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDY 989
Query: 703 W 703
W
Sbjct: 990 W 990
Score = 140 bits (354), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 184/366 (50%), Gaps = 23/366 (6%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
+ L+LF ++ +G T + C L +I + K+V +Y + +G++ DL++ + +
Sbjct: 500 KTLKLFALMHKQGERS-DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGI 558
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLD------LWEE 225
L M+V+CG M A+ FD +P + V+ +I+G I++G+ AF +F L +E
Sbjct: 559 LDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDE 618
Query: 226 FSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDA 285
F T AT+ +AS+ L + G+Q+H+ ALK+ ++ FV +L+DMY+KCGSI+DA
Sbjct: 619 F------TIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDA 672
Query: 286 QGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRL 345
+F + WN ++ G A HG +E L L+ +M+ G+K D TF ++ C+
Sbjct: 673 YCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHS 732
Query: 346 A----SLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS- 400
+ +H + H +G +I S L D + G ++ A ++ + M + S
Sbjct: 733 GLVSEAYKHMRSMHGD---YGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASM 789
Query: 401 WNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMS 460
+ L+A G E + ++L + P + +LS + ++ ++M
Sbjct: 790 YRTLLAACRVQGDTETGKRVATKLL--ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMM 847
Query: 461 RDHKIK 466
+ HK+K
Sbjct: 848 KGHKVK 853
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 164/346 (47%), Gaps = 32/346 (9%)
Query: 207 IDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNV 266
+ SG Y F D+ E +C TF M+ + ++ +++G+Q+H ALK+G +
Sbjct: 291 LHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLML 350
Query: 267 FVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDS 326
VS +LI+MY K A+ VFD MSE+ + WN++IAG A +G EA+ L+ ++
Sbjct: 351 TVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRC 410
Query: 327 GVKMDHFTFSMIIRICTRLA-SLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIED 385
G+K D +T + +++ + L L +KQ H ++ D ++AL+D YS+ +++
Sbjct: 411 GLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKE 470
Query: 386 A-----RHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVL 440
A RH FD +++WNA++AGY G + ++LF M G R + T V
Sbjct: 471 AEILFERHNFD------LVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVF 524
Query: 441 SACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFAL--IRGAPFK 498
C ++++ ++ A+ ++L G+LD + A F
Sbjct: 525 KTCG----------FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 499 ------TTKNMWAALLTACRVNGNLE--LGKFAAEKLYGMEPEKLS 536
W +++ C NG E F+ +L G+ P++ +
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFT 620
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 101/184 (54%), Gaps = 5/184 (2%)
Query: 163 PDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYL-----EAFL 217
P+ ++ N ++ M+ +CG + ARR+FD+MP+R+LVS N I+A S + + +AFL
Sbjct: 72 PERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFL 131
Query: 218 LFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYS 277
LF L ++ T + M++ + + H A K+G + FV+ AL+++Y
Sbjct: 132 LFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYL 191
Query: 278 KCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSM 337
K G +++ + +F+EM + V WN ++ Y G+ EEA+DL SG+ + T +
Sbjct: 192 KFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRL 251
Query: 338 IIRI 341
+ RI
Sbjct: 252 LARI 255
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 149/334 (44%), Gaps = 33/334 (9%)
Query: 111 REALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNR 170
++A LF IL + + T ++ C+ + + Y G + D ++
Sbjct: 127 QQAFLLFRILRQDVVY-TSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGA 185
Query: 171 VLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCG 230
++ ++++ G + + + LF+EMP R++V N+++ ++ G EA +DL F G
Sbjct: 186 LVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA----IDLSSAFHSSG 241
Query: 231 SRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFD 290
+R A + GD+ S G ++ D
Sbjct: 242 LNPNEITLRLLARIS-----------------GDD-----------SDAGQVKSFANGND 273
Query: 291 EMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEH 350
S + N ++ Y G L + +M +S V+ D TF +++ ++ SL
Sbjct: 274 ASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLAL 333
Query: 351 AKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGN 410
+Q H ++ G L + +++L++ Y K + AR VFD M +++ISWN++IAG
Sbjct: 334 GQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQ 393
Query: 411 HGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS 444
+G EAV LF Q+L G++P+ T +VL A S
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 99/193 (51%), Gaps = 5/193 (2%)
Query: 249 VGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYA 308
+GK H+ L F+ LI MYSKCGS+ A+ VFD+M ++ V WN+I+A YA
Sbjct: 57 LGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYA 116
Query: 309 LHGYS-----EEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGF 363
++A L+ +R V T S ++++C + ++ H + G
Sbjct: 117 QSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGL 176
Query: 364 GLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQ 423
D ALV+ Y K+G++++ + +F++M ++V+ WN ++ Y G EEA++L
Sbjct: 177 DGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSA 236
Query: 424 MLLNGMRPNHVTF 436
+G+ PN +T
Sbjct: 237 FHSSGLNPNEITL 249
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 209/577 (36%), Positives = 339/577 (58%), Gaps = 11/577 (1%)
Query: 130 SSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFD 189
SS Y L+ + + R++ +++ ++++ G + + ++ M+V+CG ++ A+R+FD
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFD 243
Query: 190 EMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISV 249
+M + V+C ++ G +G +A LF+DL E + S F+ +++A A LE +++
Sbjct: 244 QMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNL 303
Query: 250 GKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYAL 309
GKQ+H+C K+G V V L+D Y KC S E A F E+ E V W+ II+GY
Sbjct: 304 GKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQ 363
Query: 310 HGYSEEALDLYYEMRDSGVK-MDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIV 368
EEA+ + +R ++ FT++ I + C+ LA Q HA ++
Sbjct: 364 MSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY 423
Query: 369 ANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNG 428
SAL+ YSK G ++DA VF+ M ++++W A I+G+ +G EA+ LFE+M+ G
Sbjct: 424 GESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCG 483
Query: 429 MRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEA 488
M+PN VTF+AVL+ACS +GL E+G +M R + + P HY CMI++ R GLLDEA
Sbjct: 484 MKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEA 543
Query: 489 FALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSS 548
++ PF+ W L+ C + NLELG+ A E+L ++PE + YV+ N+Y +
Sbjct: 544 LKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWA 603
Query: 549 GKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEI 608
GK +EAAE+++ + + L+ +CSWI+ K + H F+ GD+ H QT+EIY K+
Sbjct: 604 GKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEF---- 659
Query: 609 SKHGYVPEEKTLLPDVDEQEQRVLSYHSEKLAVAFGLINT--SDWTPLQIVQSHRICCDC 666
G++ E ++ E+ +++L HSE+LA+AFGLI+ + P+++ ++ R C DC
Sbjct: 660 --DGFM-EGDMFQCNMTERREQLLD-HSERLAIAFGLISVHGNAPAPIKVFKNLRACPDC 715
Query: 667 HNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
H K +++VTG EIV+RD+ RFHHFK+G CSC DYW
Sbjct: 716 HEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 155/564 (27%), Positives = 252/564 (44%), Gaps = 67/564 (11%)
Query: 100 QIEKL--VLNKRYREALELFEILEF--EGGFDVGSSTYDALISACIGLRSIREVKRVFSY 155
Q+E L V ++R+ E FE L+ + G V S +Y L AC LRS+ R+
Sbjct: 49 QVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSH-GRLLHD 107
Query: 156 MLSTGFE-PDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLE 214
+ G E P + ++N VL M+ C + DA +LFDEM E N VS +I+ + G +
Sbjct: 108 RMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDK 167
Query: 215 AFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALID 274
A LF + S + T++++ + G+Q+H+ ++ G N + +++
Sbjct: 168 AVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVN 227
Query: 275 MYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFT 334
MY KCG + A+ VFD+M+ K V ++ GY G + +AL L+ ++ GV+ D F
Sbjct: 228 MYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFV 287
Query: 335 FSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKML 394
FS++++ C L L KQ HA + + G ++ + LVDFY K E A F ++
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR 347
Query: 395 CKNVISWNALIAGYGNHGRGEEAVELFEQML-LNGMRPNHVTFLAVLSAC---------- 443
N +SW+A+I+GY + EEAV+ F+ + N N T+ ++ AC
Sbjct: 348 EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGG 407
Query: 444 -------------------------SRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIEL 478
S+ G + E+F+SM P + + I
Sbjct: 408 QVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMD-----NPDIVAWTAFISG 462
Query: 479 LGREGLLDEAFALIR---GAPFKTTKNMWAALLTACRVNGNLELGKFAAEKL---YGMEP 532
G EA L K + A+LTAC G +E GK + + Y + P
Sbjct: 463 HAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAP 522
Query: 533 EKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSH- 591
+ +Y +++IY SG L EA + ++ + + A SW FLSG +H
Sbjct: 523 -TIDHYDCMIDIYARSGLLDEALKFMKNMPFEP----DAMSW-------KCFLSGCWTHK 570
Query: 592 -VQTKEIYRKVDRMMLEISKHGYV 614
++ EI + R + GYV
Sbjct: 571 NLELGEIAGEELRQLDPEDTAGYV 594
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 211/577 (36%), Positives = 349/577 (60%), Gaps = 3/577 (0%)
Query: 130 SSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFD 189
S T +L+SAC + SY + G E +L++ N+++ ++ G + D +++FD
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFD 306
Query: 190 EMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISV 249
M R+L+S N II + L A LF ++ T ++ + L I
Sbjct: 307 RMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRA 366
Query: 250 GKQLHSCALKMG-FGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYA 308
+ + L+ G F +++ + A++ MY+K G ++ A+ VF+ + + WNTII+GYA
Sbjct: 367 CRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYA 426
Query: 309 LHGYSEEALDLYYEMRDSG-VKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDI 367
+G++ EA+++Y M + G + + T+ ++ C++ +L + H L+++G LD+
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 368 VANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLN 427
++L D Y K GR+EDA +F ++ N + WN LIA +G HG GE+AV LF++ML
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 428 GMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDE 487
G++P+H+TF+ +LSACS SGL + G F+ M D+ I P HY CM+++ GR G L+
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLET 606
Query: 488 AFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNS 547
A I+ + ++W ALL+ACRV+GN++LGK A+E L+ +EPE + +V+L N+Y S
Sbjct: 607 ALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYAS 666
Query: 548 SGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLE 607
+GK + E+ KGLR P S +EV + VF +G+Q+H +E+YR++ + +
Sbjct: 667 AGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAK 726
Query: 608 ISKHGYVPEEKTLLPDV-DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDC 666
+ GYVP+ + +L DV D++++ +L HSE+LA+AF LI T T ++I ++ R+C DC
Sbjct: 727 LKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDC 786
Query: 667 HNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
H+ K I+ +T REI+VRD++RFHHFK+G+CSCGDYW
Sbjct: 787 HSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 241/489 (49%), Gaps = 48/489 (9%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
E + F + G T+ +++ AC R++ + ++ L GF D+Y+ +
Sbjct: 135 EVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASL 191
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
+ ++ R + +AR LFDEMP R++ S N +I+G SG+ EA L L S
Sbjct: 192 IHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA----LTLSNGLRAMDS 247
Query: 232 RTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDE 291
T +++ A + G +HS ++K G +FVS LID+Y++ G + D Q VFD
Sbjct: 248 VTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDR 307
Query: 292 MSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHA 351
M + + WN+II Y L+ A+ L+ EMR S ++ D T + I ++L +
Sbjct: 308 MYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRAC 367
Query: 352 KQAHAGLVRHGFGL-DIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGN 410
+ +R G+ L DI +A+V Y+K G ++ AR VF+ + +VISWN +I+GY
Sbjct: 368 RSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQ 427
Query: 411 HGRGEEAVELFEQMLLNG-MRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRA 469
+G EA+E++ M G + N T+++VL ACS++G +G ++ + ++ +
Sbjct: 428 NGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDV 486
Query: 470 MHYACMIELLGREGLLDEAFAL------IRGAPFKTT-----------------KNM--- 503
+ ++ G+ G L++A +L + P+ T K M
Sbjct: 487 FVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 546
Query: 504 --------WAALLTACRVNGNLELGKFAAEKL---YGMEPEKLSNYVVLLNIYNSSGKLK 552
+ LL+AC +G ++ G++ E + YG+ P L +Y ++++Y +G+L+
Sbjct: 547 GVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPS-LKHYGCMVDMYGRAGQLE 605
Query: 553 EAAEVIRTL 561
A + I+++
Sbjct: 606 TALKFIKSM 614
Score = 144 bits (362), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 207/404 (51%), Gaps = 43/404 (10%)
Query: 184 ARRLFDEMPERNLVSCNMIIAGMIDSGDYLEA------FLLFLDLWEEFSDCGSRTFATM 237
AR FD + R++ + N++I+G +G+ E F+L L ++ RTF ++
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDY-----RTFPSV 159
Query: 238 IRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTT 297
++A + G ++H ALK GF +V+V+ +LI +YS+ ++ +A+ +FDEM +
Sbjct: 160 LKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDM 216
Query: 298 VGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAG 357
WN +I+GY G ++EAL L +R MD T ++ CT H+
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLSNGLR----AMDSVTVVSLLSACTEAGDFNRGVTIHSY 272
Query: 358 LVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEA 417
++HG ++ ++ L+D Y+++GR+ D + VFD+M +++ISWN++I Y + + A
Sbjct: 273 SIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRA 332
Query: 418 VELFEQMLLNGMRPNHVTFLAVLSACSRSG-----LSERGWEIFQSMSRDHKIKPRAMHY 472
+ LF++M L+ ++P+ +T +++ S S+ G S +G+ + + + A
Sbjct: 333 ISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNA--- 389
Query: 473 ACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAE--KLYGM 530
++ + + GL+D A A+ P T W +++ NG FA+E ++Y +
Sbjct: 390 --VVVMYAKLGLVDSARAVFNWLP-NTDVISWNTIISGYAQNG------FASEAIEMYNI 440
Query: 531 ---EPEKLSN---YVVLLNIYNSSGKLKEAAEVIRTLRRKGLRM 568
E E +N +V +L + +G L++ ++ L + GL +
Sbjct: 441 MEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYL 484
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 150/305 (49%), Gaps = 15/305 (4%)
Query: 265 NVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLY-YEM 323
NV +S L+++Y G++ A+ FD + + WN +I+GY G S E + + M
Sbjct: 85 NVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 144
Query: 324 RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRI 383
SG+ D+ TF +++ C + + H ++ GF D+ ++L+ YS++ +
Sbjct: 145 LSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 201
Query: 384 EDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP-NHVTFLAVLSA 442
+AR +FD+M +++ SWNA+I+GY G +EA+ L NG+R + VT +++LSA
Sbjct: 202 GNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSA 256
Query: 443 CSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKN 502
C+ +G RG I S S H ++ +I+L G L + + + +
Sbjct: 257 CTEAGDFNRGVTI-HSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLIS 315
Query: 503 MWAALLTACRVNGN--LELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRT 560
W +++ A +N + F +L ++P+ L+ + L +I + G ++ V
Sbjct: 316 -WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT-LISLASILSQLGDIRACRSVQGF 373
Query: 561 LRRKG 565
RKG
Sbjct: 374 TLRKG 378
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 2/202 (0%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
EA+E++ I+E EG T+ +++ AC ++R+ ++ +L G D+++ +
Sbjct: 433 EAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSL 492
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
M+ +CG + DA LF ++P N V N +IA G +A +LF ++ +E
Sbjct: 493 ADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDH 552
Query: 232 RTFATMIRASAGLELISVGKQ-LHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFD 290
TF T++ A + L+ G+ G ++ ++DMY + G +E A
Sbjct: 553 ITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIK 612
Query: 291 EMSEKTTVG-WNTIIAGYALHG 311
MS + W +++ +HG
Sbjct: 613 SMSLQPDASIWGALLSACRVHG 634
Score = 69.3 bits (168), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 338 IIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKN 397
+ R CT L S AK HA LV ++ ++ LV+ Y G + ARH FD + ++
Sbjct: 60 LFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRD 116
Query: 398 VISWNALIAGYGNHGRGEEAVELFEQ-MLLNGMRPNHVTFLAVLSAC 443
V +WN +I+GYG G E + F ML +G+ P++ TF +VL AC
Sbjct: 117 VYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC 163
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 221/576 (38%), Positives = 337/576 (58%), Gaps = 36/576 (6%)
Query: 164 DLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLW 223
D+ N ++ +H++ G M A F++M ER++V+ N +I+G G L A +F +
Sbjct: 211 DISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKML 270
Query: 224 EEFSDCGSR-TFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSI 282
+ R T A+++ A A LE + +GKQ+HS + GF + V ALI MYS+CG +
Sbjct: 271 RDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGV 330
Query: 283 E---------------------------------DAQGVFDEMSEKTTVGWNTIIAGYAL 309
E A+ +F + ++ V W +I GY
Sbjct: 331 ETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQ 390
Query: 310 HGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVA 369
HG EA++L+ M G + + +T + ++ + + LASL H KQ H V+ G +
Sbjct: 391 HGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSV 450
Query: 370 NSALVDFYSKWGRIEDARHVFDKMLC-KNVISWNALIAGYGNHGRGEEAVELFEQMLLNG 428
++AL+ Y+K G I A FD + C ++ +SW ++I HG EEA+ELFE ML+ G
Sbjct: 451 SNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEG 510
Query: 429 MRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEA 488
+RP+H+T++ V SAC+ +GL +G + F M KI P HYACM++L GR GLL EA
Sbjct: 511 LRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEA 570
Query: 489 FALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSS 548
I P + W +LL+ACRV+ N++LGK AAE+L +EPE Y L N+Y++
Sbjct: 571 QEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSAC 630
Query: 549 GKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEI 608
GK +EAA++ ++++ ++ SWIEVK + HVF D +H + EIY + ++ EI
Sbjct: 631 GKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEI 690
Query: 609 SKHGYVPEEKTLLPDVDEQ-EQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCH 667
K GYVP+ ++L D++E+ ++++L +HSEKLA+AFGLI+T D T L+I+++ R+C DCH
Sbjct: 691 KKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCH 750
Query: 668 NAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
AIK I+ + GREI+VRD +RFHHFKDG CSC DYW
Sbjct: 751 TAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/458 (26%), Positives = 207/458 (45%), Gaps = 75/458 (16%)
Query: 169 NRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSD 228
N VL + + G M FD++P+R+ VS +I G + G Y +A + D+ +E +
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 229 CGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGV 288
T ++ + A + GK++HS +K+G NV VS +L++MY+KCG A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 289 FD-------------------------------EMSEKTTVGWNTIIAGYALHGYSEEAL 317
FD +M+E+ V WN++I+G+ GY AL
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 318 DLYYEM-RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDF 376
D++ +M RDS + D FT + ++ C L L KQ H+ +V GF + + +AL+
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISM 323
Query: 377 YSKWGRIEDAR---------------------------------HVFDKMLCKNVISWNA 403
YS+ G +E AR ++F + ++V++W A
Sbjct: 324 YSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTA 383
Query: 404 LIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDH 463
+I GY HG EA+ LF M+ G RPN T A+LS S G +I S +
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 464 KIKPRAMHYACMIELLGREGLL---DEAFALIRGAPFKTTKNMWAALLTACRVNGNLE-- 518
+I ++ A +I + + G + AF LIR + W +++ A +G+ E
Sbjct: 444 EIYSVSVSNA-LITMYAKAGNITSASRAFDLIRCERDTVS---WTSMIIALAQHGHAEEA 499
Query: 519 LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAE 556
L F + G+ P+ ++ YV + + +G + + +
Sbjct: 500 LELFETMLMEGLRPDHIT-YVGVFSACTHAGLVNQGRQ 536
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 198/413 (47%), Gaps = 49/413 (11%)
Query: 75 IYTEELKESSL-PDTQMKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTY 133
I+++ L++S L PD C+ +EKL + K+ + GFD+
Sbjct: 265 IFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHI-------VTTGFDISGIVL 317
Query: 134 DALISA---CIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLM--HVRCGMMIDARRLF 188
+ALIS C G+ + R ++ DL + L+ +++ G M A+ +F
Sbjct: 318 NALISMYSRCGGVETARR-------LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIF 370
Query: 189 DEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELIS 248
+ +R++V+ +I G G Y EA LF + S T A M+ ++ L +S
Sbjct: 371 VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLS 430
Query: 249 VGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMS-EKTTVGWNTIIAGY 307
GKQ+H A+K G +V VS ALI MY+K G+I A FD + E+ TV W ++I
Sbjct: 431 HGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIAL 490
Query: 308 ALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFG-LD 366
A HG++EEAL+L+ M G++ DH T+ + CT HAGLV G D
Sbjct: 491 AQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT-----------HAGLVNQGRQYFD 539
Query: 367 IVAN-----------SALVDFYSKWGRIEDARHVFDKM-LCKNVISWNALIAGYGNHGRG 414
++ + + +VD + + G +++A+ +KM + +V++W +L++ H
Sbjct: 540 MMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNI 599
Query: 415 EEAVELFEQMLLNGMRP-NHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIK 466
+ E++LL + P N + A+ + S G E +I +SM +D ++K
Sbjct: 600 DLGKVAAERLLL--LEPENSGAYSALANLYSACGKWEEAAKIRKSM-KDGRVK 649
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/310 (24%), Positives = 151/310 (48%), Gaps = 13/310 (4%)
Query: 258 LKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEAL 317
L+ F N +S YSK G ++ FD++ ++ +V W T+I GY G +A+
Sbjct: 77 LRTAFSWNTVLSA-----YSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAI 131
Query: 318 DLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFY 377
+ +M G++ FT + ++ +E K+ H+ +V+ G ++ +++L++ Y
Sbjct: 132 RVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMY 191
Query: 378 SKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFL 437
+K G A+ VFD+M+ +++ SWNA+IA + G+ + A+ FEQM + VT+
Sbjct: 192 AKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQM----AERDIVTWN 247
Query: 438 AVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIEL---LGREGLLDEAFALIRG 494
+++S ++ G R +IF M RD + P A ++ L + + + + I
Sbjct: 248 SMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVT 307
Query: 495 APFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEA 554
F + + AL++ G +E + E+ G + K+ + LL+ Y G + +A
Sbjct: 308 TGFDISGIVLNALISMYSRCGGVETARRLIEQ-RGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 555 AEVIRTLRRK 564
+ +L+ +
Sbjct: 367 KNIFVSLKDR 376
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 326 SGVKMDHFTFSMIIRICTRLASLEHAKQAHAGL-VRHGFGLDIVANSALVDFYSKWGRIE 384
SG+ + + ++ + ++ HA++ + +R F + V ++ YSK G ++
Sbjct: 43 SGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSA-----YSKRGDMD 97
Query: 385 DARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS 444
FD++ ++ +SW +I GY N G+ +A+ + M+ G+ P T VL++ +
Sbjct: 98 STCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVA 157
Query: 445 RSGLSERGWEI 455
+ E G ++
Sbjct: 158 ATRCMETGKKV 168
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 333 FTFSMIIRICTRLASLE--------HAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIE 384
+ S ++ +CT L A+ H +++ G + + L++ YSK G
Sbjct: 7 LSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYAL 66
Query: 385 DARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQM 424
AR +FD+M + SWN +++ Y G + E F+Q+
Sbjct: 67 HARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQL 106
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/570 (37%), Positives = 348/570 (61%), Gaps = 3/570 (0%)
Query: 136 LISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERN 195
++ C ++ E K ++ E D+ + N ++ + +CG + AR++FD M ER+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 196 LVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVG-KQLH 254
LVS N +I + EA +FL++ E T ++++ A G+ ++ K+LH
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSA-CGVNCDALECKKLH 185
Query: 255 SCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSE 314
++K N++V AL+D+Y+KCG I+DA VF+ M +K++V W++++AGY + E
Sbjct: 186 CLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYE 245
Query: 315 EALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALV 374
EAL LY + ++ + FT S +I C+ LA+L KQ HA + + GFG ++ S+ V
Sbjct: 246 EALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAV 305
Query: 375 DFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHV 434
D Y+K G + ++ +F ++ KN+ WN +I+G+ H R +E + LFE+M +GM PN V
Sbjct: 306 DMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEV 365
Query: 435 TFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRG 494
TF ++LS C +GL E G F+ M + + P +HY+CM+++LGR GLL EA+ LI+
Sbjct: 366 TFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKS 425
Query: 495 APFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEA 554
PF T ++W +LL +CRV NLEL + AAEKL+ +EPE N+V+L NIY ++ + +E
Sbjct: 426 IPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEI 485
Query: 555 AEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYV 614
A+ + LR ++ + SWI++K + H F G+ H + +EI +D ++++ K GY
Sbjct: 486 AKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYK 545
Query: 615 PEEKTLLPDVD-EQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLI 673
P + L DV+ +++ +L HSEKLA+ FGL+ + +P++I+++ RIC DCH +K
Sbjct: 546 PSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAA 605
Query: 674 AMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+M T R I+VRD +RFHHF DG CSCGD+W
Sbjct: 606 SMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 87 DTQMKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSI 146
++ K S S + V NK Y EAL L+ + + T ++I AC L ++
Sbjct: 221 ESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQ-RMSLEQNQFTLSSVICACSNLAAL 279
Query: 147 REVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGM 206
E K++ + + +GF ++++ + + M+ +CG + ++ +F E+ E+NL N II+G
Sbjct: 280 IEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGF 339
Query: 207 IDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCA-LKMGFGDN 265
E +LF + ++ TF++++ L+ G++ G N
Sbjct: 340 AKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPN 399
Query: 266 VFVSCALIDMYSKCGSIEDAQGVFDEMS-EKTTVGWNTIIAG 306
V ++D+ + G + +A + + + T W +++A
Sbjct: 400 VVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/576 (37%), Positives = 348/576 (60%), Gaps = 6/576 (1%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
T +++ AC LR + K +++YML GF + +RN ++ ++ +CG MI AR +F+ M
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLF--LDLWEEFSDCGSRTFATMIRASAGLELISV 249
++ VS N II+G I SGD +EA LF + + EE +D T+ +I S L +
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD--HITYLMLISVSTRLADLKF 426
Query: 250 GKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYAL 309
GK LHS +K G ++ VS ALIDMY+KCG + D+ +F M TV WNT+I+
Sbjct: 427 GKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVR 486
Query: 310 HGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVA 369
G L + +MR S V D TF + + +C LA+ K+ H L+R G+ ++
Sbjct: 487 FGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQI 546
Query: 370 NSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGM 429
+AL++ YSK G +E++ VF++M ++V++W +I YG +G GE+A+E F M +G+
Sbjct: 547 GNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGI 606
Query: 430 RPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAF 489
P+ V F+A++ ACS SGL + G F+ M +KI P HYAC+++LL R + +A
Sbjct: 607 VPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAE 666
Query: 490 ALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSG 549
I+ P K ++WA++L ACR +G++E + + ++ + P+ ++ N Y +
Sbjct: 667 EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALR 726
Query: 550 KLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEIS 609
K + + + ++L+ K + P SWIEV K HVF SGD S Q++ IY+ ++ + ++
Sbjct: 727 KWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMA 786
Query: 610 KHGYVPEEKTLLPDV--DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCH 667
K GY+P+ + + ++ +E+++R++ HSE+LA+AFGL+NT TPLQ++++ R+C DCH
Sbjct: 787 KEGYIPDPREVSQNLEEEEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCH 846
Query: 668 NAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
KLI+ + GREI+VRDA+RFH FKDG CSC D W
Sbjct: 847 EVTKLISKIVGREILVRDANRFHLFKDGTCSCKDRW 882
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 191/347 (55%), Gaps = 2/347 (0%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S I N + EALE + L E T+ ++I AC GL V+ +L
Sbjct: 76 SIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILD 134
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
GFE DL++ N ++ M+ R G++ AR++FDEMP R+LVS N +I+G G Y EA +
Sbjct: 135 MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEI 194
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
+ +L + S T ++++ A L ++ G+ LH ALK G V V+ L+ MY K
Sbjct: 195 YHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLK 254
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMI 338
DA+ VFDEM + +V +NT+I GY EE++ ++ E D K D T S +
Sbjct: 255 FRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVSSV 313
Query: 339 IRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
+R C L L AK + +++ GF L+ + L+D Y+K G + AR VF+ M CK+
Sbjct: 314 LRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDT 373
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSR 445
+SWN++I+GY G EA++LF+ M++ + +H+T+L ++S +R
Sbjct: 374 VSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR 420
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 165/300 (55%), Gaps = 2/300 (0%)
Query: 145 SIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM-PERNLVSCNMII 203
++ E++R+ + ++S G + + +++ + + +F + P +N+ N II
Sbjct: 19 NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSII 78
Query: 204 AGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFG 263
+G + EA + L E TF ++I+A AGL +G ++ L MGF
Sbjct: 79 RAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFE 138
Query: 264 DNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEM 323
++FV AL+DMYS+ G + A+ VFDEM + V WN++I+GY+ HGY EEAL++Y+E+
Sbjct: 139 SDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL 198
Query: 324 RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRI 383
++S + D FT S ++ L ++ + H ++ G +V N+ LV Y K+ R
Sbjct: 199 KNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRP 258
Query: 384 EDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSAC 443
DAR VFD+M ++ +S+N +I GY EE+V +F + L+ +P+ +T +VL AC
Sbjct: 259 TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRAC 317
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 85/182 (46%), Gaps = 3/182 (1%)
Query: 338 IIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKM-LCK 396
I R + ++L ++ HA ++ G + L+D YS + + VF ++ K
Sbjct: 10 ISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAK 69
Query: 397 NVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIF 456
NV WN++I + +G EA+E + ++ + + P+ TF +V+ AC+ +E G ++
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 457 QSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGN 516
+ + D + ++++ R GLL A + P + + W +L++ +G
Sbjct: 130 EQI-LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVS-WNSLISGYSSHGY 187
Query: 517 LE 518
E
Sbjct: 188 YE 189
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDE 190
+T+ + C L + R K + +L G+E +L + N ++ M+ +CG + ++ R+F+
Sbjct: 510 ATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFER 569
Query: 191 MPERNLVS-CNMIIA-GMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELIS 248
M R++V+ MI A GM G+ +A F D+ + S F +I A + L+
Sbjct: 570 MSRRDVVTWTGMIYAYGMYGEGE--KALETFADMEKSGIVPDSVVFIAIIYACSHSGLVD 627
Query: 249 VG 250
G
Sbjct: 628 EG 629
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 235/589 (39%), Positives = 347/589 (58%), Gaps = 12/589 (2%)
Query: 125 GFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDA 184
GF+V T LI+AC + +K++ + +S GF+ + N + + + G++ +A
Sbjct: 135 GFEVDGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREA 192
Query: 185 RRLFDEMPE-RNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAG 243
+F M E R+ VS N +I + +A L+ ++ + T A+++ A
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTS 252
Query: 244 LELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIE---DAQGVFDEMSEKTTVGW 300
L+ + G+Q H +K GF N V LID YSKCG + D++ VF E+ V W
Sbjct: 253 LDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVW 312
Query: 301 NTIIAGYALHG-YSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLV 359
NT+I+GY+++ SEEA+ + +M+ G + D +F + C+ L+S KQ H +
Sbjct: 313 NTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAI 372
Query: 360 R-HGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAV 418
+ H I N+AL+ Y K G ++DAR VFD+M N +S+N +I GY HG G EA+
Sbjct: 373 KSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEAL 432
Query: 419 ELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIEL 478
L+++ML +G+ PN +TF+AVLSAC+ G + G E F +M KI+P A HY+CMI+L
Sbjct: 433 LLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDL 492
Query: 479 LGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNY 538
LGR G L+EA I P+K WAALL ACR + N+ L + AA +L M+P + Y
Sbjct: 493 LGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPY 552
Query: 539 VVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIY 598
V+L N+Y + K +E A V +++R K +R P CSWIEVKK+ HVF++ D SH +E+
Sbjct: 553 VMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVN 612
Query: 599 RKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRV----LSYHSEKLAVAFGLINTSDWTPL 654
++ MM ++ K GYV ++K + DE + L +HSEKLAVAFGL++T D L
Sbjct: 613 EYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEEL 672
Query: 655 QIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+V++ RIC DCHNAIK ++ V GREI+VRD RFH FKDG CSCGDYW
Sbjct: 673 VVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 168 bits (426), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 214/448 (47%), Gaps = 51/448 (11%)
Query: 162 EPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLD 221
EP+++ N ++ + + + AR+LFDE+P+ + VS N +I+G D+ + A +LF
Sbjct: 71 EPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKR 130
Query: 222 LWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGS 281
+ + + T + +I +A + + + KQLH ++ GF V+ A + YSK G
Sbjct: 131 MRKLGFEVDGFTLSGLI--AACCDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGL 188
Query: 282 IEDAQGVFDEMSE-KTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIR 340
+ +A VF M E + V WN++I Y H +AL LY EM G K+D FT + ++
Sbjct: 189 LREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLN 248
Query: 341 ICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIE---DARHVFDKMLCKN 397
T L L +Q H L++ GF + S L+DFYSK G + D+ VF ++L +
Sbjct: 249 ALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPD 308
Query: 398 VISWNALIAGYG-NHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIF 456
++ WN +I+GY N EEAV+ F QM G RP+ +F+ V SACS + +I
Sbjct: 309 LVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIH 368
Query: 457 QSMSRDHKIKPR-------------------------------AMHYACMIELLGREGLL 485
+ H R A+ + CMI+ + G
Sbjct: 369 GLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHG 428
Query: 486 DEAFALIRG------APFKTTKNMWAALLTACRVNGNLELGK---FAAEKLYGMEPEKLS 536
EA L + AP K T + A+L+AC G ++ G+ ++ + +EPE
Sbjct: 429 TEALLLYQRMLDSGIAPNKIT---FVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEA-E 484
Query: 537 NYVVLLNIYNSSGKLKEAAEVIRTLRRK 564
+Y ++++ +GKL+EA I + K
Sbjct: 485 HYSCMIDLLGRAGKLEEAERFIDAMPYK 512
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/524 (37%), Positives = 327/524 (62%), Gaps = 4/524 (0%)
Query: 184 ARRLFDEMPER-NLVSCNMIIAGMIDSGDYLEAFLLFLDL-WEEFSDCGSRTFATMIRAS 241
A ++F ++ + N+ N +I G + G+ + AF L+ ++ + + T+ +I+A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 242 AGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWN 301
+ + +G+ +HS ++ GFG ++V +L+ +Y+ CG + A VFD+M EK V WN
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 302 TIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRH 361
++I G+A +G EEAL LY EM G+K D FT ++ C ++ +L K+ H +++
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 362 GFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELF 421
G ++ +++ L+D Y++ GR+E+A+ +FD+M+ KN +SW +LI G +G G+EA+ELF
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 422 EQM-LLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLG 480
+ M G+ P +TF+ +L ACS G+ + G+E F+ M ++KI+PR H+ CM++LL
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 481 REGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVV 540
R G + +A+ I+ P + +W LL AC V+G+ +L +FA ++ +EP +YV+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVL 431
Query: 541 LLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRK 600
L N+Y S + + ++ + + R G++ +P S +EV + H FL GD+SH Q+ IY K
Sbjct: 432 LSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAK 491
Query: 601 VDRMMLEISKHGYVPEEKTLLPDVDEQE-QRVLSYHSEKLAVAFGLINTSDWTPLQIVQS 659
+ M + GYVP+ + DV+E+E + + YHSEK+A+AF LI+T + +P+ +V++
Sbjct: 492 LKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKN 551
Query: 660 HRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
R+C DCH AIKL++ V REIVVRD SRFHHFK+G CSC DYW
Sbjct: 552 LRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 154 bits (389), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 198/405 (48%), Gaps = 43/405 (10%)
Query: 84 SLPDTQMKKPSAGICSQIEKLV-------LNKRYRE------ALELFEILEFEGGFDVGS 130
SLP + + S+IEK + L + Y E A L+ + G + +
Sbjct: 62 SLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDT 121
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDE 190
TY LI A + +R + + S ++ +GF +Y++N +L ++ CG + A ++FD+
Sbjct: 122 HTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDK 181
Query: 191 MPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVG 250
MPE++LV+ N +I G ++G EA L+ ++ + T +++ A A + +++G
Sbjct: 182 MPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLG 241
Query: 251 KQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALH 310
K++H +K+G N+ S L+D+Y++CG +E+A+ +FDEM +K +V W ++I G A++
Sbjct: 242 KRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVN 301
Query: 311 GYSEEALDLYYEMRDS-GVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGL---- 365
G+ +EA++L+ M + G+ TF I+ C+ H G+V+ GF
Sbjct: 302 GFGKEAIELFKYMESTEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRM 350
Query: 366 --------DIVANSALVDFYSKWGRIEDARHVFDKM-LCKNVISWNALIAGYGNHGRGEE 416
I +VD ++ G+++ A M + NV+ W L+ HG +
Sbjct: 351 REEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDL 410
Query: 417 AVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSR 461
A F ++ + + PNH +LS SE+ W Q + +
Sbjct: 411 AE--FARIQILQLEPNHSGDYVLLSNMYA---SEQRWSDVQKIRK 450
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 408 bits (1049), Expect = e-113, Method: Compositional matrix adjust.
Identities = 231/621 (37%), Positives = 364/621 (58%), Gaps = 12/621 (1%)
Query: 92 KPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDV--GSSTYDALISACIGLRSIREV 149
K S S I L N + EA+E ++ + D+ GS T + +S+C L+ +
Sbjct: 378 KDSVSWNSMITGLDQNGCFIEAVERYKSMRRH---DILPGSFTLISSLSSCASLKWAKLG 434
Query: 150 KRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDS 209
+++ L G + ++ + N ++ ++ G + + R++F MPE + VS N II + S
Sbjct: 435 QQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS 494
Query: 210 GDYL-EAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFV 268
L EA + FL+ TF++++ A + L +GKQ+H ALK D
Sbjct: 495 ERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATT 554
Query: 269 SCALIDMYSKCGSIEDAQGVFDEMSEK-TTVGWNTIIAGYALHGYSEEALDLYYEMRDSG 327
ALI Y KCG ++ + +F M+E+ V WN++I+GY + +ALDL + M +G
Sbjct: 555 ENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTG 614
Query: 328 VKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDAR 387
++D F ++ ++ +A+LE + HA VR D+V SALVD YSK GR++ A
Sbjct: 615 QRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYAL 674
Query: 388 HVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMR-PNHVTFLAVLSACSRS 446
F+ M +N SWN++I+GY HG+GEEA++LFE M L+G P+HVTF+ VLSACS +
Sbjct: 675 RFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHA 734
Query: 447 GLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAA 506
GL E G++ F+SMS + + PR H++CM ++LGR G LD+ I P K +W
Sbjct: 735 GLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRT 794
Query: 507 LLTA-CRVNG-NLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRK 564
+L A CR NG ELGK AAE L+ +EPE NYV+L N+Y + G+ ++ + + ++
Sbjct: 795 VLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDA 854
Query: 565 GLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDV 624
++ SW+ +K H+F++GD+SH IY+K+ + ++ GYVP+ L D+
Sbjct: 855 DVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFALYDL 914
Query: 625 D-EQEQRVLSYHSEKLAVAFGL-INTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIV 682
+ E ++ +LSYHSEKLAVAF L S P++I+++ R+C DCH+A K I+ + GR+I+
Sbjct: 915 EQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQII 974
Query: 683 VRDASRFHHFKDGMCSCGDYW 703
+RD++RFHHF+DG CSC D+W
Sbjct: 975 LRDSNRFHHFQDGACSCSDFW 995
Score = 135 bits (341), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 9/296 (3%)
Query: 135 ALISACIGLRSIREVKRVF-SYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPE 193
+ + +C+G R R F S + + D+Y+ N ++ ++ G + AR++FDEMP
Sbjct: 8 SFVQSCVGHRG---AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL 64
Query: 194 RNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISV--GK 251
RN VS I++G +G++ EA + D+ +E F +++RA + + + G+
Sbjct: 65 RNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGR 124
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKC-GSIEDAQGVFDEMSEKTTVGWNTIIAGYALH 310
Q+H K+ + + VS LI MY KC GS+ A F ++ K +V WN+II+ Y+
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 311 GYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLA--SLEHAKQAHAGLVRHGFGLDIV 368
G A ++ M+ G + +TF ++ L + +Q + + G D+
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 369 ANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQM 424
S LV ++K G + AR VF++M +N ++ N L+ G GEEA +LF M
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM 300
Score = 132 bits (333), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 187/385 (48%), Gaps = 12/385 (3%)
Query: 111 REALELFEILEFEGGFDVGSSTYDALISACIGLR--SIREVKRVFSYMLSTGFEPDLYMR 168
R A +F ++++G T+ +L++ L +R ++++ + +G DL++
Sbjct: 188 RSAFRIFSSMQYDGSRPT-EYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVG 246
Query: 169 NRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSD 228
+ ++ + G + AR++F++M RN V+ N ++ G++ EA LF+D+ D
Sbjct: 247 SGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDM-NSMID 305
Query: 229 CGSRTFATMIRASAGLEL-----ISVGKQLHSCALKMGFGD-NVFVSCALIDMYSKCGSI 282
++ ++ + L + G+++H + G D V + L++MY+KCGSI
Sbjct: 306 VSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI 365
Query: 283 EDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRIC 342
DA+ VF M++K +V WN++I G +G EA++ Y MR + FT + C
Sbjct: 366 ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSC 425
Query: 343 TRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWN 402
L + +Q H ++ G L++ ++AL+ Y++ G + + R +F M + +SWN
Sbjct: 426 ASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWN 485
Query: 403 ALIAGYGNHGRG-EEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSR 461
++I R EAV F G + N +TF +VLSA S E G +I ++
Sbjct: 486 SIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQI-HGLAL 544
Query: 462 DHKIKPRAMHYACMIELLGREGLLD 486
+ I A +I G+ G +D
Sbjct: 545 KNNIADEATTENALIACYGKCGEMD 569
Score = 97.4 bits (241), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 253 LHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGY 312
HS K +V++ LI+ Y + G A+ VFDEM + V W I++GY+ +G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 313 SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLE--HAKQAHAGLVRHGFGLDIVAN 370
+EAL +M G+ + + F ++R C + S+ +Q H + + + +D V +
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 371 SALVDFYSK-WGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGM 429
+ L+ Y K G + A F + KN +SWN++I+ Y G A +F M +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 430 RPNHVTFLA-VLSACS 444
RP TF + V +ACS
Sbjct: 203 RPTEYTFGSLVTTACS 218
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 351 AKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGN 410
A+ H+ L ++ D+ + L++ Y + G AR VFD+M +N +SW +++GY
Sbjct: 20 ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSR 79
Query: 411 HGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSG 447
+G +EA+ M+ G+ N F++VL AC G
Sbjct: 80 NGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIG 116
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 407 bits (1046), Expect = e-112, Method: Compositional matrix adjust.
Identities = 216/581 (37%), Positives = 348/581 (59%), Gaps = 16/581 (2%)
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDE 190
S++ ++I C L+ +R +++ ++ GF D +R +++ + +C M+DA RLF E
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKE 355
Query: 191 MP-ERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSR----TFATMIRASAGLE 245
+ N+VS +I+G + + EA +DL+ E G R T++ ++ A L
Sbjct: 356 IGCVGNVVSWTAMISGFLQNDGKEEA----VDLFSEMKRKGVRPNEFTYSVILTA---LP 408
Query: 246 LISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIA 305
+IS ++H+ +K + + V AL+D Y K G +E+A VF + +K V W+ ++A
Sbjct: 409 VIS-PSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLA 467
Query: 306 GYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRL-ASLEHAKQAHAGLVRHGFG 364
GYA G +E A+ ++ E+ G+K + FTFS I+ +C AS+ KQ H ++
Sbjct: 468 GYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD 527
Query: 365 LDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQM 424
+ +SAL+ Y+K G IE A VF + K+++SWN++I+GY HG+ +A+++F++M
Sbjct: 528 SSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 587
Query: 425 LLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGL 484
++ + VTF+ V +AC+ +GL E G + F M RD KI P H +CM++L R G
Sbjct: 588 KKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 485 LDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNI 544
L++A +I P +W +L ACRV+ ELG+ AAEK+ M+PE + YV+L N+
Sbjct: 648 LEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNM 707
Query: 545 YNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRM 604
Y SG +E A+V + + + ++ P SWIEVK + + FL+GD+SH +IY K++ +
Sbjct: 708 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDL 767
Query: 605 MLEISKHGYVPEEKTLLPDV-DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRIC 663
+ GY P+ +L D+ DE ++ VL+ HSE+LA+AFGLI T +PL I+++ R+C
Sbjct: 768 STRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVC 827
Query: 664 CDCHNAIKLIAMVTGREIVVRDASRFHHF-KDGMCSCGDYW 703
DCH IKLIA + REIVVRD++RFHHF DG+CSCGD+W
Sbjct: 828 GDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 196/371 (52%), Gaps = 11/371 (2%)
Query: 160 GFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLF 219
GF D+ + ++ +++ D R++FDEM ERN+V+ +I+G + E LF
Sbjct: 123 GFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 220 LDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKC 279
+ + E + S TFA + A + G Q+H+ +K G + VS +LI++Y KC
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKC 242
Query: 280 GSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMII 339
G++ A+ +FD+ K+ V WN++I+GYA +G EAL ++Y MR + V++ +F+ +I
Sbjct: 243 GNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI 302
Query: 340 RICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLC-KNV 398
++C L L +Q H +V++GF D +AL+ YSK + DA +F ++ C NV
Sbjct: 303 KLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNV 362
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQS 458
+SW A+I+G+ + EEAV+LF +M G+RPN T+ +L+A SE ++ ++
Sbjct: 363 VSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKT 422
Query: 459 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
A +++ + G ++EA + G K W+A+L G E
Sbjct: 423 NYERSSTVGTA-----LLDAYVKLGKVEEAAKVFSGIDDKDIV-AWSAMLAGYAQTGETE 476
Query: 519 LGKFAAEKLYG 529
AA K++G
Sbjct: 477 ----AAIKMFG 483
Score = 159 bits (401), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 126/477 (26%), Positives = 219/477 (45%), Gaps = 49/477 (10%)
Query: 176 VRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFA 235
V + +A LFD+ P R+ S ++ G G EA LFL++ + F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 236 TMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEK 295
++++ SA L G+QLH +K GF D+V V +L+D Y K + +D + VFDEM E+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 296 TTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAH 355
V W T+I+GYA + ++E L L+ M++ G + + FTF+ + + Q H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 356 AGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGE 415
+V++G I +++L++ Y K G + AR +FDK K+V++WN++I+GY +G
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 416 EAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACM 475
EA+ +F M LN +R + +F +V+ C+ ++ S+ + + + + A M
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALM 337
Query: 476 IELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE--LGKFAAEKLYGMEPE 533
+ +LD A L + W A+++ N E + F+ K G+ P
Sbjct: 338 VAYSKCTAMLD-ALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 534 KLSNYVV------------------------------LLNIYNSSGKLKEAAEVIRTLRR 563
+ + V+ LL+ Y GK++EAA+V +
Sbjct: 397 EFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDD 456
Query: 564 KGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTL 620
K + +W L+G + QT E + +M E++K G P E T
Sbjct: 457 KDI-----VAW-------SAMLAG---YAQTGETEAAI-KMFGELTKGGIKPNEFTF 497
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 225/609 (36%), Positives = 342/609 (56%), Gaps = 6/609 (0%)
Query: 99 SQIEKLVLNKRYREAL-ELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYML 157
S I L N + AL E FE+ G T+ A LR K++ + +
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRR--EGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAV 135
Query: 158 STGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFL 217
G D+++ M+ + + DAR+LFDE+PERNL + N I+ + G EA
Sbjct: 136 KCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIE 195
Query: 218 LFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYS 277
F++ S TF + A + +++G QLH L+ GF +V V LID Y
Sbjct: 196 AFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYG 255
Query: 278 KCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSM 337
KC I ++ +F EM K V W +++A Y + E+A LY R V+ F S
Sbjct: 256 KCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISS 315
Query: 338 IIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKN 397
++ C +A LE + HA V+ I SALVD Y K G IED+ FD+M KN
Sbjct: 316 VLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKN 375
Query: 398 VISWNALIAGYGNHGRGEEAVELFEQMLLNGM--RPNHVTFLAVLSACSRSGLSERGWEI 455
+++ N+LI GY + G+ + A+ LFE+M G PN++TF+++LSACSR+G E G +I
Sbjct: 376 LVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKI 435
Query: 456 FQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNG 515
F SM + I+P A HY+C++++LGR G+++ A+ I+ P + T ++W AL ACR++G
Sbjct: 436 FDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHG 495
Query: 516 NLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWI 575
+LG AAE L+ ++P+ N+V+L N + ++G+ EA V L+ G++ SWI
Sbjct: 496 KPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWI 555
Query: 576 EVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRV-LSY 634
VK Q H F + D+SH+ KEI + ++ E+ GY P+ K L D++E+E+ +S+
Sbjct: 556 TVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSH 615
Query: 635 HSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKD 694
HSEKLA+AFGL++ P++I ++ RIC DCH+ K ++ REI+VRD +RFH FKD
Sbjct: 616 HSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKD 675
Query: 695 GMCSCGDYW 703
G+CSC DYW
Sbjct: 676 GICSCKDYW 684
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 121/470 (25%), Positives = 214/470 (45%), Gaps = 50/470 (10%)
Query: 136 LISACIGLRSIREVKRVFSYMLST-GFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPER 194
L+ I S+R + V + ++ T P ++ N ++ M+ + AR + P R
Sbjct: 12 LLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR 71
Query: 195 NLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLH 254
N+VS +I+G+ +G + A + F ++ E TF +A A L L GKQ+H
Sbjct: 72 NVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIH 131
Query: 255 SCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSE 314
+ A+K G +VFV C+ DMY K +DA+ +FDE+ E+ WN I+ G
Sbjct: 132 ALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 315 EALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALV 374
EA++ + E R + TF + C+ L Q H ++R GF D+ + L+
Sbjct: 192 EAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLI 251
Query: 375 DFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHV 434
DFY K +I + +F +M KN +SW +L+A Y + E+A L+ + + + +
Sbjct: 252 DFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDF 311
Query: 435 TFLAVLSACSRSGLSERGWEIFQSMSRDHKIKP---RAMHY-ACMIELLGR--------- 481
+VLSAC +G++ G E+ +S+ H +K R + + ++++ G+
Sbjct: 312 MISSVLSAC--AGMA--GLELGRSI-HAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQ 366
Query: 482 ----------------------EGLLDEAFALI-----RGAPFKTTKNMWAALLTACRVN 514
+G +D A AL RG + +LL+AC
Sbjct: 367 AFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRA 426
Query: 515 GNLELGKFAAEKL---YGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTL 561
G +E G + + YG+EP +Y ++++ +G ++ A E I+ +
Sbjct: 427 GAVENGMKIFDSMRSTYGIEPGA-EHYSCIVDMLGRAGMVERAYEFIKKM 475
>sp|P93011|PP182_ARATH Pentatricopeptide repeat-containing protein At2g33760
OS=Arabidopsis thaliana GN=PCMP-H6 PE=3 SV=1
Length = 583
Score = 402 bits (1034), Expect = e-111, Method: Compositional matrix adjust.
Identities = 209/579 (36%), Positives = 346/579 (59%), Gaps = 9/579 (1%)
Query: 130 SSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFD 189
S+ Y+A++ A G R ++++++V ++++ TG+ + +++ + + LF
Sbjct: 9 SAAYEAIVRA--GPR-VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFL 65
Query: 190 EMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISV 249
+P + N +I L + + + TF ++I++ A L + +
Sbjct: 66 SVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRI 125
Query: 250 GKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYAL 309
GK +H A+ GFG + +V AL+ YSKCG +E A+ VFD M EK+ V WN++++G+
Sbjct: 126 GKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQ 185
Query: 310 HGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVA 369
+G ++EA+ ++Y+MR+SG + D TF ++ C + ++ H ++ G L++
Sbjct: 186 NGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKL 245
Query: 370 NSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLN-G 428
+AL++ YS+ G + AR VFDKM NV +W A+I+ YG HG G++AVELF +M + G
Sbjct: 246 GTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCG 305
Query: 429 MRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEA 488
PN+VTF+AVLSAC+ +GL E G +++ M++ +++ P H+ CM+++LGR G LDEA
Sbjct: 306 PIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEA 365
Query: 489 FALIR---GAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIY 545
+ I T +W A+L AC+++ N +LG A++L +EP+ ++V+L NIY
Sbjct: 366 YKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIY 425
Query: 546 NSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMM 605
SGK E + + + R LR S IEV+ + ++F GD+SH +T EIYR ++ ++
Sbjct: 426 ALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLI 485
Query: 606 LEISKHGYVPEEKTLLPDVDEQEQR-VLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICC 664
+ GY P + ++ V+E+E+ L YHSEKLAVAFGL+ T D + IV++ RIC
Sbjct: 486 SRCKEIGYAPVSEEVMHQVEEEEKEFALRYHSEKLAVAFGLLKTVD-VAITIVKNLRICE 544
Query: 665 DCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
DCH+A K I++V+ R+I VRD RFHHF++G CSC DYW
Sbjct: 545 DCHSAFKYISIVSNRQITVRDKLRFHHFQNGSCSCLDYW 583
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 55/299 (18%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
EA+++F + E GF+ S+T+ +L+SAC ++ V Y++S G + ++ + +
Sbjct: 191 EAIQVFYQMR-ESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCG- 230
+ ++ RCG + AR +FD+M E N+ + +I+ G +A LF + + DCG
Sbjct: 250 INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMED---DCGP 306
Query: 231 ---SRTFATMIRASAGLELISVGKQLH-----SCALKMGFGDNVFVSCALIDMYSKCGSI 282
+ TF ++ A A L+ G+ ++ S L G +V ++DM + G +
Sbjct: 307 IPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFL 362
Query: 283 EDAQGV---FDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMII 339
++A D + T T + G KM H + + +
Sbjct: 363 DEAYKFIHQLDATGKATAPALWTAMLG--------------------ACKM-HRNYDLGV 401
Query: 340 RICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
I RL +LE H + L + Y+ G+ ++ H+ D M+ N+
Sbjct: 402 EIAKRLIALEPDNPGH--------------HVMLSNIYALSGKTDEVSHIRDGMMRNNL 446
>sp|Q9STF3|PP265_ARATH Pentatricopeptide repeat-containing protein At3g46790,
chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1
Length = 657
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 207/581 (35%), Positives = 350/581 (60%), Gaps = 11/581 (1%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
TY+ LI C S+ + RV ++L G + D ++ +++ M+ G + AR++FD+
Sbjct: 79 TYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT 138
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLEL----I 247
+R + N + + +G E L+ + + T+ +++A E +
Sbjct: 139 RKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHL 198
Query: 248 SVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGY 307
GK++H+ + G+ +V++ L+DMY++ G ++ A VF M + V W+ +IA Y
Sbjct: 199 MKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACY 258
Query: 308 ALHGYSEEALDLYYEM----RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGF 363
A +G + EAL + EM +DS + T +++ C LA+LE K H ++R G
Sbjct: 259 AKNGKAFEALRTFREMMRETKDSSP--NSVTMVSVLQACASLAALEQGKLIHGYILRRGL 316
Query: 364 GLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQ 423
+ SALV Y + G++E + VFD+M ++V+SWN+LI+ YG HG G++A+++FE+
Sbjct: 317 DSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEE 376
Query: 424 MLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREG 483
ML NG P VTF++VL ACS GL E G +F++M RDH IKP+ HYACM++LLGR
Sbjct: 377 MLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRAN 436
Query: 484 LLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLN 543
LDEA +++ + +W +LL +CR++GN+EL + A+ +L+ +EP+ NYV+L +
Sbjct: 437 RLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLAD 496
Query: 544 IYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDR 603
IY + E V + L +GL+ LP W+EV+++ + F+S D+ + ++I+ + +
Sbjct: 497 IYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVK 556
Query: 604 MMLEISKHGYVPEEKTLLPDVD-EQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRI 662
+ ++ + GY+P+ K +L +++ E+++R++ HSEKLA+AFGLINTS P++I ++ R+
Sbjct: 557 LAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRL 616
Query: 663 CCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
C DCH K I+ +EI+VRD +RFH FK+G+CSCGDYW
Sbjct: 617 CEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/410 (25%), Positives = 191/410 (46%), Gaps = 51/410 (12%)
Query: 197 VSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSC 256
+S N +I + G +A + + + S +T+ +I +S ++H
Sbjct: 47 ISNNQLIQSLCKEGKLKQA----IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRH 102
Query: 257 ALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEA 316
L G + F++ LI MYS GS++ A+ VFD+ ++T WN + L G+ EE
Sbjct: 103 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 162
Query: 317 LDLYYEMRDSGVKMDHFTFSMIIRICT----RLASLEHAKQAHAGLVRHGFGLDIVANSA 372
L LY++M GV+ D FT++ +++ C + L K+ HA L R G+ + +
Sbjct: 163 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 222
Query: 373 LVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQML--LNGMR 430
LVD Y+++G ++ A +VF M +NV+SW+A+IA Y +G+ EA+ F +M+
Sbjct: 223 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 282
Query: 431 PNHVTFLAVLSACS-----------------------------------RSGLSERGWEI 455
PN VT ++VL AC+ R G E G +
Sbjct: 283 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRV 342
Query: 456 FQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNG 515
F M + ++ + + G++ + L GA T + ++L AC G
Sbjct: 343 FDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGA--SPTPVTFVSVLGACSHEG 400
Query: 516 NLELGKFAAEKLY---GMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLR 562
+E GK E ++ G++P+ + +Y ++++ + +L EAA++++ +R
Sbjct: 401 LVEEGKRLFETMWRDHGIKPQ-IEHYACMVDLLGRANRLDEAAKMVQDMR 449
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 101/213 (47%), Gaps = 3/213 (1%)
Query: 107 NKRYREALELF-EILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDL 165
N + EAL F E++ S T +++ AC L ++ + K + Y+L G + L
Sbjct: 261 NGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSIL 320
Query: 166 YMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEE 225
+ + ++ M+ RCG + +R+FD M +R++VS N +I+ G +A +F ++
Sbjct: 321 PVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN 380
Query: 226 FSDCGSRTFATMIRASAGLELISVGKQLHSCALK-MGFGDNVFVSCALIDMYSKCGSIED 284
+ TF +++ A + L+ GK+L + G + ++D+ + +++
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 285 AQGVFDEM-SEKTTVGWNTIIAGYALHGYSEEA 316
A + +M +E W +++ +HG E A
Sbjct: 441 AAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELA 473
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 396 bits (1018), Expect = e-109, Method: Compositional matrix adjust.
Identities = 227/617 (36%), Positives = 344/617 (55%), Gaps = 61/617 (9%)
Query: 144 RSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGM----MIDARRLFDEMPERNLVSC 199
R+IR++ ++ + + +G D +L + + A ++F++MP+RN S
Sbjct: 34 RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSW 93
Query: 200 NMIIAGMIDSGD--YLEAFLLFLDLW-EEFSDCGSRTFATMIRASAGLELISVGKQLHSC 256
N II G +S + L A LF ++ +EF + TF ++++A A I GKQ+H
Sbjct: 94 NTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGL 153
Query: 257 ALKMGFGDNVFVSCALIDMYSKCGSIED-------------------------------- 284
ALK GFG + FV L+ MY CG ++D
Sbjct: 154 ALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNV 213
Query: 285 -------------AQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMD 331
A+ +FD+M +++ V WNT+I+GY+L+G+ ++A++++ EM+ ++ +
Sbjct: 214 MIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 332 HFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFD 391
+ T ++ +RL SLE + H G +D V SAL+D YSK G IE A HVF+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 392 KMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSER 451
++ +NVI+W+A+I G+ HG+ +A++ F +M G+RP+ V ++ +L+ACS GL E
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 452 GWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTAC 511
G F M ++PR HY CM++LLGR GLLDEA I P K +W ALL AC
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 512 RVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPA 571
R+ GN+E+GK A L M P YV L N+Y S G E +E+ ++ K +R P
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Query: 572 CSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKH----GYVPEEKTLLPDVDEQ 627
CS I++ H F+ D SH + KEI + M++EIS GY P +L +++E+
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEI----NSMLVEISDKLRLAGYRPITTQVLLNLEEE 569
Query: 628 E-QRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDA 686
+ + VL YHSEK+A AFGLI+TS P++IV++ RIC DCH++IKLI+ V R+I VRD
Sbjct: 570 DKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDR 629
Query: 687 SRFHHFKDGMCSCGDYW 703
RFHHF+DG CSC DYW
Sbjct: 630 KRFHHFQDGSCSCMDYW 646
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 154/344 (44%), Gaps = 50/344 (14%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMID-------- 183
T+ +++ AC I+E K++ L GF D ++ + ++ M+V CG M D
Sbjct: 130 TFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 184 -------------------------------------ARRLFDEMPERNLVSCNMIIAGM 206
AR LFD+M +R++VS N +I+G
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 207 IDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNV 266
+G + +A +F ++ + T +++ A + L + +G+ LH A G +
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 267 FVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDS 326
+ ALIDMYSKCG IE A VF+ + + + W+ +I G+A+HG + +A+D + +MR +
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 327 GVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVR-HGFGLDIVANSALVDFYSKWGRIED 385
GV+ + ++ C+ +E ++ + +V G I +VD + G +++
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 386 ARHVFDKMLCK-NVISWNALIAG---YGNHGRGEEAVELFEQML 425
A M K + + W AL+ GN G+ + M+
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 395 bits (1014), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/638 (34%), Positives = 349/638 (54%), Gaps = 38/638 (5%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
+ I L REA + F + F +S + I +C +S+ K++ ++
Sbjct: 18 TAIATLCSKGNLREAFQRFRLNIF-----TNTSLFTPFIQSCTTRQSLPSGKQLHCLLVV 72
Query: 159 TGFEPDLYMRNRVLLMH-------------------------------VRCGMMIDARRL 187
+GF D ++ N ++ M+ VR G +++AR++
Sbjct: 73 SGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKV 132
Query: 188 FDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELI 247
FDEMP+R L + N +IAG+I E LF ++ T ++ SAGL +
Sbjct: 133 FDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSV 192
Query: 248 SVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGY 307
S+G+Q+H +K G ++ V+ +L MY + G ++D + V M + V WNT+I G
Sbjct: 193 SIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGN 252
Query: 308 ALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDI 367
A +G E L LY M+ SG + + TF ++ C+ LA +Q HA ++ G +
Sbjct: 253 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVV 312
Query: 368 VANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQML-L 426
S+L+ YSK G + DA F + ++ + W+++I+ YG HG+G+EA+ELF M
Sbjct: 313 AVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 372
Query: 427 NGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLD 486
M N V FL +L ACS SGL ++G E+F M + KP HY C+++LLGR G LD
Sbjct: 373 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLD 432
Query: 487 EAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYN 546
+A A+IR P KT +W LL+AC ++ N E+ + +++ ++P + YV+L N++
Sbjct: 433 QAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHA 492
Query: 547 SSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMML 606
S+ + ++ +EV +++R K ++ SW E K + H F GD+S ++KEIY + + L
Sbjct: 493 SAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTL 552
Query: 607 EISKHGYVPEEKTLLPDVDEQEQRV-LSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCD 665
E+ GY P+ ++L D+DE+E+ L HSEKLAVAF L+ + P++I+++ R+C D
Sbjct: 553 EMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSD 612
Query: 666 CHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
CH A K I+++ REI +RD SRFHHF +G CSCGDYW
Sbjct: 613 CHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 394 bits (1013), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/573 (34%), Positives = 328/573 (57%), Gaps = 1/573 (0%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
TY +++ CI L + +++ S ++ T F+ + Y+ + ++ M+ + G + A +
Sbjct: 492 TYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK 251
+++VS +IAG +A F + + + A AGL+ + G+
Sbjct: 552 AGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ 611
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHG 311
Q+H+ A GF ++ AL+ +YS+CG IE++ F++ + WN +++G+ G
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSG 671
Query: 312 YSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANS 371
+EEAL ++ M G+ ++FTF ++ + A+++ KQ HA + + G+ + +
Sbjct: 672 NNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCN 731
Query: 372 ALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP 431
AL+ Y+K G I DA F ++ KN +SWNA+I Y HG G EA++ F+QM+ + +RP
Sbjct: 732 ALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRP 791
Query: 432 NHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFAL 491
NHVT + VLSACS GL ++G F+SM+ ++ + P+ HY C++++L R GLL A
Sbjct: 792 NHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEF 851
Query: 492 IRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKL 551
I+ P K +W LL+AC V+ N+E+G+FAA L +EPE + YV+L N+Y S K
Sbjct: 852 IQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKW 911
Query: 552 KEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKH 611
+ ++ KG++ P SWIEVK H F GDQ+H EI+ + S+
Sbjct: 912 DARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEI 971
Query: 612 GYVPEEKTLLPDVD-EQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAI 670
GYV + +LL ++ EQ+ ++ HSEKLA++FGL++ P+ ++++ R+C DCH I
Sbjct: 972 GYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWI 1031
Query: 671 KLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
K ++ V+ REI+VRDA RFHHF+ G CSC DYW
Sbjct: 1032 KFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 195/390 (50%), Gaps = 10/390 (2%)
Query: 133 YDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMP 192
+ +++SAC + S+ +++ +L GF D Y+ N ++ ++ G +I A +F M
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 193 ERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQ 252
+R+ V+ N +I G+ G +A LF + + + S T A+++ A + + G+Q
Sbjct: 351 QRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQ 410
Query: 253 LHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGY 312
LH+ K+GF N + AL+++Y+KC IE A F E + V WN ++ Y L
Sbjct: 411 LHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDD 470
Query: 313 SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSA 372
+ ++ +M+ + + +T+ I++ C RL LE +Q H+ +++ F L+ S
Sbjct: 471 LRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSV 530
Query: 373 LVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPN 432
L+D Y+K G+++ A + + K+V+SW +IAGY + ++A+ F QML G+R +
Sbjct: 531 LIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSD 590
Query: 433 HVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALI 492
V +SAC+ + G +I A ++ L R G ++E++
Sbjct: 591 EVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNA-LVTLYSRCGKIEESY--- 646
Query: 493 RGAPFKTTKN----MWAALLTACRVNGNLE 518
F+ T+ W AL++ + +GN E
Sbjct: 647 --LAFEQTEAGDNIAWNALVSGFQQSGNNE 674
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 122/493 (24%), Positives = 232/493 (47%), Gaps = 46/493 (9%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
+A+ELF+ + +G + S+T +L+ AC ++ +++ +Y GF + + +
Sbjct: 372 KAMELFKRMHLDG-LEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGAL 430
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIA--GMIDSGDYLEAFLLFLDLWEEFSDC 229
L ++ +C + A F E N+V N+++ G++D D +F +F + E
Sbjct: 431 LNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLD--DLRNSFRIFRQMQIEEIVP 488
Query: 230 GSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVF 289
T+ ++++ L + +G+Q+HS +K F N +V LIDMY+K G ++ A +
Sbjct: 489 NQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL 548
Query: 290 DEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLE 349
+ K V W T+IAGY + + ++AL + +M D G++ D + + C L +L+
Sbjct: 549 IRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALK 608
Query: 350 HAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYG 409
+Q HA GF D+ +ALV YS+ G+IE++ F++ + I+WNAL++G+
Sbjct: 609 EGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQ 668
Query: 410 NHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEI-------------- 455
G EEA+ +F +M G+ N+ TF + + A S + ++G ++
Sbjct: 669 QSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETE 728
Query: 456 ---------------------FQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRG 494
F +S +++ A+ A G E L ++F +
Sbjct: 729 VCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEAL--DSFDQMIH 786
Query: 495 APFKTTKNMWAALLTACRVNGNLELGKFAAEKL---YGMEPEKLSNYVVLLNIYNSSGKL 551
+ + +L+AC G ++ G E + YG+ P K +YV ++++ +G L
Sbjct: 787 SNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSP-KPEHYVCVVDMLTRAGLL 845
Query: 552 KEAAEVIRTLRRK 564
A E I+ + K
Sbjct: 846 SRAKEFIQEMPIK 858
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 126/471 (26%), Positives = 227/471 (48%), Gaps = 38/471 (8%)
Query: 125 GFDVGSSTYDALISACIGLR-SIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMID 183
G T L+ C+ S+ E +++ S +L G + + + ++ ++ G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 184 ARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAG 243
A ++FDEMPER + + N +I + E F LF+ + E TF+ ++ A G
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 244 LEL-ISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNT 302
+ V +Q+H+ L G D+ V LID+YS+ G ++ A+ VFD + K W
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 303 IIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHG 362
+I+G + + EA+ L+ +M G+ + FS ++ C ++ SLE +Q H +++ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 363 FGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFE 422
F D +ALV Y G + A H+F M ++ +++N LI G G GE+A+ELF+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 423 QMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSR-----DHKIK----------- 466
+M L+G+ P+ T +++ ACS G RG ++ ++ ++KI+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 467 --PRAMHYACMIE---------LLGREGLLDE---AFALIRGAPFK---TTKNMWAALLT 509
A+ Y E +L GLLD+ +F + R + + + ++L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 510 ACRVNGNLELGKFAAEKLYGMEPEKLSNYV--VLLNIYNSSGKLKEAAEVI 558
C G+LELG+ ++ + L+ YV VL+++Y GKL A +++
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQ-LNAYVCSVLIDMYAKLGKLDTAWDIL 548
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
EAL +F + EG D + T+ + + A ++++ K+V + + TG++ + + N +
Sbjct: 675 EALRVFVRMNREG-IDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAL 733
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
+ M+ +CG + DA + F E+ +N VS N II G EA F +
Sbjct: 734 ISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNH 793
Query: 232 RTFATMIRASAGLELISVG-KQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFD 290
T ++ A + + L+ G S + G ++DM ++ G + A+
Sbjct: 794 VTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQ 853
Query: 291 EMSEKT-TVGWNTIIAGYALH 310
EM K + W T+++ +H
Sbjct: 854 EMPIKPDALVWRTLLSACVVH 874
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 216/610 (35%), Positives = 350/610 (57%), Gaps = 9/610 (1%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S I V N + L +F + G ++ +T ++ + C R I + V S +
Sbjct: 266 SIINGYVSNGLAEKGLSVF-VQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVK 324
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
F + N +L M+ +CG + A+ +F EM +R++VS +IAG G EA L
Sbjct: 325 ACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKL 384
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
F ++ EE T ++ A L+ GK++H + G ++FVS AL+DMY+K
Sbjct: 385 FEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAK 444
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLY-YEMRDSGVKMDHFTFSM 337
CGS+++A+ VF EM K + WNTII GY+ + Y+ EAL L+ + + D T +
Sbjct: 445 CGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVAC 504
Query: 338 IIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKN 397
++ C L++ + ++ H ++R+G+ D ++LVD Y+K G + A +FD + K+
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 398 VISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQ 457
++SW +IAGYG HG G+EA+ LF QM G+ + ++F+++L ACS SGL + GW F
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624
Query: 458 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNL 517
M + KI+P HYAC++++L R G L +A+ I P +W ALL CR++ ++
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684
Query: 518 ELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEV 577
+L + AEK++ +EPE YV++ NIY + K ++ + + + ++GLR P CSWIE+
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Query: 578 KKQPHVFLSGDQSHVQTKEI---YRKVDRMMLEISKHGYVPEEKTLLPDVDEQE-QRVLS 633
K + ++F++GD S+ +T+ I RKV M+E GY P K L D +E E + L
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIE---EGYSPLTKYALIDAEEMEKEEALC 801
Query: 634 YHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFK 693
HSEKLA+A G+I++ +++ ++ R+C DCH K ++ +T REIV+RD++RFH FK
Sbjct: 802 GHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFK 861
Query: 694 DGMCSCGDYW 703
DG CSC +W
Sbjct: 862 DGHCSCRGFW 871
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/445 (28%), Positives = 229/445 (51%), Gaps = 10/445 (2%)
Query: 125 GFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDA 184
G ++ S T+ + + LRS+ +++ ++L +GF + N ++ +++ + A
Sbjct: 190 GVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSA 249
Query: 185 RRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGL 244
R++FDEM ER+++S N II G + +G + +F+ + + T ++ A
Sbjct: 250 RKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADS 309
Query: 245 ELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTII 304
LIS+G+ +HS +K F L+DMYSKCG ++ A+ VF EMS+++ V + ++I
Sbjct: 310 RLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMI 369
Query: 305 AGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFG 364
AGYA G + EA+ L+ EM + G+ D +T + ++ C R L+ K+ H + + G
Sbjct: 370 AGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLG 429
Query: 365 LDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQM 424
DI ++AL+D Y+K G +++A VF +M K++ISWN +I GY + EA+ LF +
Sbjct: 430 FDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NL 488
Query: 425 LLNGMR--PNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYA-CMIELLGR 481
LL R P+ T VL AC+ ++G EI + R+ R H A ++++ +
Sbjct: 489 LLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDR--HVANSLVDMYAK 546
Query: 482 EGLLDEAFALIRGAPFKTTKNMWAALLTACRVN--GNLELGKFAAEKLYGMEPEKLSNYV 539
G L A L K + W ++ ++ G + F + G+E +++S +V
Sbjct: 547 CGALLLAHMLFDDIASKDLVS-WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEIS-FV 604
Query: 540 VLLNIYNSSGKLKEAAEVIRTLRRK 564
LL + SG + E +R +
Sbjct: 605 SLLYACSHSGLVDEGWRFFNIMRHE 629
Score = 178 bits (451), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/342 (30%), Positives = 191/342 (55%), Gaps = 4/342 (1%)
Query: 118 EILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVR 177
++L G +D+ T +++ C +S+++ K V +++ GF D + +++ LM+
Sbjct: 82 KLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTN 141
Query: 178 CGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATM 237
CG + +A R+FDE+ + N+++ + SGD+ + LF + + S TF+ +
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
Query: 238 IRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTT 297
++ + L + G+QLH LK GFG+ V +L+ Y K ++ A+ VFDEM+E+
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 298 VGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRIC--TRLASLEHAKQAH 355
+ WN+II GY +G +E+ L ++ +M SG+++D T + C +RL SL + H
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISL--GRAVH 319
Query: 356 AGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGE 415
+ V+ F + + L+D YSK G ++ A+ VF +M ++V+S+ ++IAGY G
Sbjct: 320 SIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAG 379
Query: 416 EAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQ 457
EAV+LFE+M G+ P+ T AVL+ C+R L + G + +
Sbjct: 380 EAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE 421
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 394 bits (1012), Expect = e-108, Method: Compositional matrix adjust.
Identities = 211/601 (35%), Positives = 351/601 (58%), Gaps = 3/601 (0%)
Query: 105 VLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPD 164
V N + ++L+L + GF + T+D + A IGL + K V +L T + D
Sbjct: 223 VENGYFEDSLKLLSCMRM-AGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLD 281
Query: 165 LYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWE 224
+ +L ++ + G M DA ++F+EMP+ ++V + +IA +G EA LF+ + E
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 225 EFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIED 284
F T ++++ A + +G+QLH +K+GF +++VS ALID+Y+KC ++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 285 AQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTR 344
A +F E+S K V WNT+I GY G +A ++ E + V + TFS + C
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 345 LASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNAL 404
LAS++ Q H ++ + +++L+D Y+K G I+ A+ VF++M +V SWNAL
Sbjct: 462 LASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNAL 521
Query: 405 IAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHK 464
I+GY HG G +A+ + + M +PN +TFL VLS CS +GL ++G E F+SM RDH
Sbjct: 522 ISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHG 581
Query: 465 IKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAA 524
I+P HY CM+ LLGR G LD+A LI G P++ + +W A+L+A N E + +A
Sbjct: 582 IEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSA 641
Query: 525 EKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVF 584
E++ + P+ + YV++ N+Y + + A + ++++ G++ P SWIE + H F
Sbjct: 642 EEILKINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYF 701
Query: 585 LSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQ-RVLSYHSEKLAVAF 643
G H K I ++ + ++ ++ GYVP+ +L D+D++E+ + L HSE+LA+A+
Sbjct: 702 SVGLSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAY 761
Query: 644 GLIN-TSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDY 702
GL+ S + I+++ RIC DCH+A+K+I+ + R++V+RD +RFHHF G+CSCGD+
Sbjct: 762 GLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDH 821
Query: 703 W 703
W
Sbjct: 822 W 822
Score = 156 bits (394), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 135/509 (26%), Positives = 233/509 (45%), Gaps = 50/509 (9%)
Query: 130 SSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFD 189
S Y A++ CI K + +L G DL+ N +L +V+ G DA LFD
Sbjct: 49 SHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFD 108
Query: 190 EMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISV 249
EMPERN VS + G + L+ L E + F + ++ L+ +
Sbjct: 109 EMPERNNVSFVTLAQGYACQ----DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEI 164
Query: 250 GKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYAL 309
LHS +K+G+ N FV ALI+ YS CGS++ A+ VF+ + K V W I++ Y
Sbjct: 165 CPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVE 224
Query: 310 HGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVA 369
+GY E++L L MR +G +++TF ++ L + + AK H +++ + LD
Sbjct: 225 NGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRV 284
Query: 370 NSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGM 429
L+ Y++ G + DA VF++M +V+ W+ +IA + +G EAV+LF +M +
Sbjct: 285 GVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFV 344
Query: 430 RPNHVTFLAVLSACSR---SGLSER--------GWEIFQSMSR---DHKIKPRAMHYACM 475
PN T ++L+ C+ SGL E+ G+++ +S D K M A
Sbjct: 345 VPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVK 404
Query: 476 I--------------ELLGREGLLD--EAFALIRGA---PFKTTKNMWAALLTACRVNGN 516
+ ++G E L + +AF++ R A T+ +++ L AC +
Sbjct: 405 LFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLAS 464
Query: 517 LELG-KFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWI 575
++LG + + +K++ L+++Y G +K A V + + SW
Sbjct: 465 MDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNE-----METIDVASW- 518
Query: 576 EVKKQPHVFLSGDQSHVQTKEIYRKVDRM 604
+ +SG +H ++ R +D M
Sbjct: 519 ------NALISGYSTHGLGRQALRILDIM 541
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 5/131 (3%)
Query: 311 GYSEEALDLYYEMRDSGVK-MDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVA 369
G+S + L E DS + +D + ++R C + AK H +++ G LD+ A
Sbjct: 27 GFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFA 86
Query: 370 NSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGM 429
+ L++ Y K G +DA ++FD+M +N +S+ L GY ++ + L+ ++ G
Sbjct: 87 TNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHREGH 142
Query: 430 RPNHVTFLAVL 440
N F + L
Sbjct: 143 ELNPHVFTSFL 153
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 393 bits (1010), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/626 (35%), Positives = 353/626 (56%), Gaps = 45/626 (7%)
Query: 117 FEILEFEGGFDVGSSTYDALISA---CIGLRSI-REVKRVFSYMLSTGFEPDLYMRNRVL 172
F + G +S +AL+S C S+ ++VF +L E D ++
Sbjct: 171 FHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEIL----EKDERSWTTMM 226
Query: 173 LMHVRCGMMIDARRLFDEMPER-NLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
+V+ G L + M + LV+ N +I+G ++ G Y EA + + +
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 232 RTFATMIRASAGLELISVGKQLHSCALKMGFGDNVF-VSCALIDMYSKCGSIEDAQGVFD 290
T+ ++IRA A L+ +GKQ+H+ L+ D F +L+ +Y KCG ++A+ +F+
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRRE--DFSFHFDNSLVSLYYKCGKFDEARAIFE 344
Query: 291 EMSEKTTVGWNTIIAGY-------------------------------ALHGYSEEALDL 319
+M K V WN +++GY A +G+ EE L L
Sbjct: 345 KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKL 404
Query: 320 YYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSK 379
+ M+ G + + FS I+ C L + + +Q HA L++ GF + A +AL+ Y+K
Sbjct: 405 FSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAK 464
Query: 380 WGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAV 439
G +E+AR VF M C + +SWNALIA G HG G EAV+++E+ML G+RP+ +T L V
Sbjct: 465 CGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTV 524
Query: 440 LSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKT 499
L+ACS +GL ++G + F SM ++I P A HYA +I+LL R G +A ++I PFK
Sbjct: 525 LTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP 584
Query: 500 TKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIR 559
T +W ALL+ CRV+GN+ELG AA+KL+G+ PE Y++L N++ ++G+ +E A V +
Sbjct: 585 TAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRK 644
Query: 560 TLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKT 619
+R +G++ ACSWIE++ Q H FL D SH + + +Y + + E+ + GYVP+
Sbjct: 645 LMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSF 704
Query: 620 LLPDV--DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVT 677
+L DV D ++ +L+ HSEK+AVAFGL+ T ++I ++ R C DCHN + ++ V
Sbjct: 705 VLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVV 764
Query: 678 GREIVVRDASRFHHFKDGMCSCGDYW 703
R+I++RD RFHHF++G CSCG++W
Sbjct: 765 QRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 142/534 (26%), Positives = 244/534 (45%), Gaps = 106/534 (19%)
Query: 130 SSTYDALISACIGLR--SIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRL 187
++ Y A + C+ LR S++ + V +++ GF+P ++ NR++ ++ + + AR+L
Sbjct: 12 ANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQL 71
Query: 188 FDEMPE---------------------------------RNLVSCNMIIAGMIDSGDYLE 214
FDE+ E R+ V N +I G + D
Sbjct: 72 FDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYS 131
Query: 215 AFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK----QLHSCALKMGFGDNVFVSC 270
A LF + E + TFA+++ AGL L++ + Q H+ ALK G G VS
Sbjct: 132 AINLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSVSN 188
Query: 271 ALIDMYSKCGS----IEDAQGVFDEMSEKTTVGWNTIIAGYALHGY-------------- 312
AL+ +YSKC S + A+ VFDE+ EK W T++ GY +GY
Sbjct: 189 ALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDN 248
Query: 313 ------------------SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQA 354
+EAL++ M SG+++D FT+ +IR C L+ KQ
Sbjct: 249 MKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQV 308
Query: 355 HAGLVRH---GFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNH 411
HA ++R F D ++LV Y K G+ ++AR +F+KM K+++SWNAL++GY +
Sbjct: 309 HAYVLRREDFSFHFD----NSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSS 364
Query: 412 GRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMH 471
G EA +F++M N ++++ ++S + +G E G ++F M R+ +P
Sbjct: 365 GHIGEAKLIFKEM----KEKNILSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYA 419
Query: 472 YACMIE---LLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLY 528
++ I+ +LG + A + F ++ + AL+T G +E A +++
Sbjct: 420 FSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVE----EARQVF 475
Query: 529 GMEPEKLS-NYVVLLNIYNSSGKLKEAAEVIRTLRRKGLR--------MLPACS 573
P S ++ L+ G EA +V + +KG+R +L ACS
Sbjct: 476 RTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS 529
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 175/359 (48%), Gaps = 41/359 (11%)
Query: 110 YREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRN 169
Y+EALE+ + G ++ TY ++I AC ++ K+V +Y+L + + N
Sbjct: 267 YQEALEMVRRM-VSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHFDN 324
Query: 170 RVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEE---- 225
++ ++ +CG +AR +F++MP ++LVS N +++G + SG EA L+F ++ E+
Sbjct: 325 SLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILS 384
Query: 226 ------------FSDCGSRTFATM---------------IRASAGLELISVGKQLHSCAL 258
F + G + F+ M I++ A L G+Q H+ L
Sbjct: 385 WMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLL 444
Query: 259 KMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALD 318
K+GF ++ ALI MY+KCG +E+A+ VF M +V WN +IA HG+ EA+D
Sbjct: 445 KIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVD 504
Query: 319 LYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQ---AHAGLVRHGFGLDIVANSALVD 375
+Y EM G++ D T ++ C+ ++ ++ + + R G D A L+D
Sbjct: 505 VYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYAR--LID 562
Query: 376 FYSKWGRIEDARHVFDKMLCKNVIS-WNALIAGYGNHGRGEEAVELFEQMLLNGMRPNH 433
+ G+ DA V + + K W AL++G HG E + +++ G+ P H
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLF--GLIPEH 619
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 392 bits (1006), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/653 (34%), Positives = 356/653 (54%), Gaps = 48/653 (7%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S IE + + ALE+F + E G + T ++ C L + K++ + ++
Sbjct: 198 SIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVT 257
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
+ ++++ N ++ M+ +CGMM +A +F M +++VS N ++AG G + +A L
Sbjct: 258 SEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRL 317
Query: 219 FLDLWEEFSDCGSRTFATMIRA------------------SAGLE-----LISV------ 249
F + EE T++ I S+G++ LISV
Sbjct: 318 FEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCAS 377
Query: 250 ------GKQLHSCALKM-------GFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMS--E 294
GK++H A+K G GD V LIDMY+KC ++ A+ +FD +S E
Sbjct: 378 VGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKE 437
Query: 295 KTTVGWNTIIAGYALHGYSEEALDLYYEM--RDSGVKMDHFTFSMIIRICTRLASLEHAK 352
+ V W +I GY+ HG + +AL+L EM D + + FT S + C LA+L K
Sbjct: 438 RDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGK 497
Query: 353 QAHAGLVRHG-FGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNH 411
Q HA +R+ + + ++ L+D Y+K G I DAR VFD M+ KN ++W +L+ GYG H
Sbjct: 498 QIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMH 557
Query: 412 GRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMH 471
G GEEA+ +F++M G + + VT L VL ACS SG+ ++G E F M + P H
Sbjct: 558 GYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH 617
Query: 472 YACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGME 531
YAC+++LLGR G L+ A LI P + +W A L+ CR++G +ELG++AAEK+ +
Sbjct: 618 YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELA 677
Query: 532 PEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSH 591
+Y +L N+Y ++G+ K+ + +R KG++ P CSW+E K F GD++H
Sbjct: 678 SNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTH 737
Query: 592 VQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRVLSY-HSEKLAVAFGLINTSD 650
KEIY+ + M I GYVPE L DVD++E+ L + HSEKLA+A+G++ T
Sbjct: 738 PHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQ 797
Query: 651 WTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
++I ++ R+C DCH A ++ + +I++RD+SRFHHFK+G CSC YW
Sbjct: 798 GAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 132/483 (27%), Positives = 223/483 (46%), Gaps = 57/483 (11%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
T+ + AC + S+R + + L TGF ++++ N ++ M+ RC + DAR++FDEM
Sbjct: 129 TFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM 188
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSR----TFATMIRASAGLELI 247
++VS N II G A +F + EF G R T ++ A L
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEF---GCRPDNITLVNVLPPCASLGTH 245
Query: 248 SVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGY 307
S+GKQLH A+ N+FV L+DMY+KCG +++A VF MS K V WN ++AGY
Sbjct: 246 SLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGY 305
Query: 308 ALHGYSEEALDLYYEMRDSGVKMDHFTFSM------------------------------ 337
+ G E+A+ L+ +M++ +KMD T+S
Sbjct: 306 SQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNE 365
Query: 338 -----IIRICTRLASLEHAKQAHA-------GLVRHGFGLDIVANSALVDFYSKWGRIED 385
++ C + +L H K+ H L ++G G + + + L+D Y+K +++
Sbjct: 366 VTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDT 425
Query: 386 ARHVFDKMLCK--NVISWNALIAGYGNHGRGEEAVELFEQMLLNG--MRPNHVTFLAVLS 441
AR +FD + K +V++W +I GY HG +A+EL +M RPN T L
Sbjct: 426 ARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALV 485
Query: 442 ACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTK 501
AC+ G +I R+ + C+I++ + G + +A L+ +
Sbjct: 486 ACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDNMMAKNE 544
Query: 502 NMWAALLTACRVNGNLE--LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIR 559
W +L+T ++G E LG F + G + + ++ VVL + SG + + E
Sbjct: 545 VTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYAC-SHSGMIDQGMEYFN 603
Query: 560 TLR 562
++
Sbjct: 604 RMK 606
Score = 109 bits (272), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 154/330 (46%), Gaps = 17/330 (5%)
Query: 247 ISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEM--SEKTTVGWNTII 304
IS K +H L G + ++ LI Y G + A + S+ WN++I
Sbjct: 41 ISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLI 99
Query: 305 AGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFG 364
Y +G + + L L+ M D++TF + + C ++S+ + AHA + GF
Sbjct: 100 RSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFI 159
Query: 365 LDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQM 424
++ +ALV YS+ + DAR VFD+M +V+SWN++I Y G+ + A+E+F +M
Sbjct: 160 SNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM 219
Query: 425 LLN-GMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREG 483
G RP+++T + VL C+ G G ++ + ++ C++++ + G
Sbjct: 220 TNEFGCRPDNITLVNVLPPCASLGTHSLGKQL-HCFAVTSEMIQNMFVGNCLVDMYAKCG 278
Query: 484 LLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKF--AAEKLYGMEPEKLSNYVVL 541
++DEA + K + W A+ V G ++G+F A M+ EK+ VV
Sbjct: 279 MMDEANTVFSNMSVKDVVS-WNAM-----VAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 542 ----LNIYNSSGKLKEAAEVIRTLRRKGLR 567
++ Y G EA V R + G++
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 223/630 (35%), Positives = 352/630 (55%), Gaps = 41/630 (6%)
Query: 111 REALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNR 170
++A++LF + + S T +ISAC L + ++V++++ ++G E + M +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSA 276
Query: 171 VLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCG 230
++ M+++C + A+RLFDE NL CN + + + G EA L ++ D G
Sbjct: 277 LVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREA----LGVFNLMMDSG 332
Query: 231 SR----TFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQ 286
R + + I + + L I GK H L+ GF + ALIDMY KC + A
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAF 392
Query: 287 GVFDEMSEKTTVGWNTIIAGYALHG-------------------------------YSEE 315
+FD MS KT V WN+I+AGY +G EE
Sbjct: 393 RIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEE 452
Query: 316 ALDLYYEMRDS-GVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALV 374
A++++ M+ GV D T I C L +L+ AK + + ++G LD+ + LV
Sbjct: 453 AIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLV 512
Query: 375 DFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHV 434
D +S+ G E A +F+ + ++V +W A I G E A+ELF+ M+ G++P+ V
Sbjct: 513 DMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGV 572
Query: 435 TFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRG 494
F+ L+ACS GL ++G EIF SM + H + P +HY CM++LLGR GLL+EA LI
Sbjct: 573 AFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIED 632
Query: 495 APFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEA 554
P + +W +LL ACRV GN+E+ +AAEK+ + PE+ +YV+L N+Y S+G+ +
Sbjct: 633 MPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDM 692
Query: 555 AEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYV 614
A+V +++ KGLR P S I+++ + H F SGD+SH + I +D + S G+V
Sbjct: 693 AKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHV 752
Query: 615 PEEKTLLPDVDEQEQ-RVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLI 673
P+ +L DVDE+E+ +LS HSEKLA+A+GLI+++ T ++IV++ R+C DCH+ K
Sbjct: 753 PDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFA 812
Query: 674 AMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+ V REI++RD +RFH+ + G CSCGD+W
Sbjct: 813 SKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/379 (30%), Positives = 186/379 (49%), Gaps = 8/379 (2%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
EA+ LF + G T+ +SAC R+ ++ ++ G+ DL+++N +
Sbjct: 117 EAILLF-LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSL 175
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLW-EEFSDCG 230
+ + CG + AR++FDEM ERN+VS +I G +A LF + +E
Sbjct: 176 VHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPN 235
Query: 231 SRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFD 290
S T +I A A LE + G+++++ G N + AL+DMY KC +I+ A+ +FD
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFD 295
Query: 291 EMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEH 350
E N + + Y G + EAL ++ M DSGV+ D + I C++L ++
Sbjct: 296 EYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILW 355
Query: 351 AKQAHAGLVRHGF-GLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYG 409
K H ++R+GF D + N AL+D Y K R + A +FD+M K V++WN+++AGY
Sbjct: 356 GKSCHGYVLRNGFESWDNICN-ALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYV 414
Query: 410 NHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRA 469
+G + A E FE M N V++ ++S + L E E+F SM +
Sbjct: 415 ENGEVDAAWETFETM----PEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 470 MHYACMIELLGREGLLDEA 488
+ + G G LD A
Sbjct: 471 VTMMSIASACGHLGALDLA 489
Score = 149 bits (375), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 137/247 (55%), Gaps = 1/247 (0%)
Query: 200 NMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALK 259
N +I G SG EA LLFL + TF + A A G Q+H +K
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 260 MGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDL 319
MG+ ++FV +L+ Y++CG ++ A+ VFDEMSE+ V W ++I GYA ++++A+DL
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDL 222
Query: 320 YYEM-RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYS 378
++ M RD V + T +I C +L LE ++ +A + G ++ + SALVD Y
Sbjct: 223 FFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM 282
Query: 379 KWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLA 438
K I+ A+ +FD+ N+ NA+ + Y G EA+ +F M+ +G+RP+ ++ L+
Sbjct: 283 KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLS 342
Query: 439 VLSACSR 445
+S+CS+
Sbjct: 343 AISSCSQ 349
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 130/243 (53%), Gaps = 6/243 (2%)
Query: 251 KQLHSCALKMGFGDNVFVSCALIDMYSKCGSIED---AQGVFDEM-SEKTTVGWNTIIAG 306
K H K G ++V L+ + G+ E A+ VF+ S T +N++I G
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 307 YALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLD 366
YA G EA+ L+ M +SG+ D +TF + C + + + Q H +V+ G+ D
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168
Query: 367 IVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLL 426
+ ++LV FY++ G ++ AR VFD+M +NV+SW ++I GY ++AV+LF +M+
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVR 228
Query: 427 N-GMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLL 485
+ + PN VT + V+SAC++ E G +++ + R+ I+ + + ++++ + +
Sbjct: 229 DEEVTPNSVTMVCVISACAKLEDLETGEKVY-AFIRNSGIEVNDLMVSALVDMYMKCNAI 287
Query: 486 DEA 488
D A
Sbjct: 288 DVA 290
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 105/219 (47%), Gaps = 4/219 (1%)
Query: 101 IEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTG 160
I LV + EA+E+F ++ + G + T ++ SAC L ++ K ++ Y+ G
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 161 FEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFL 220
+ D+ + ++ M RCG A +F+ + R++ + I M +G+ A LF
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 221 DLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKM-GFG-DNVFVSCALIDMYSK 278
D+ E+ F + A + L+ GK++ LK+ G ++V C ++D+ +
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGC-MVDLLGR 619
Query: 279 CGSIEDAQGVFDEMS-EKTTVGWNTIIAGYALHGYSEEA 316
G +E+A + ++M E V WN+++A + G E A
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>sp|Q8LK93|PP145_ARATH Pentatricopeptide repeat-containing protein At2g02980
OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2
Length = 603
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/573 (35%), Positives = 335/573 (58%), Gaps = 9/573 (1%)
Query: 136 LISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRC---GMMIDARRLFDEMP 192
LIS C S+RE+ ++ +Y + + E D+ +++ M AR LF+ M
Sbjct: 35 LISKC---NSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTESPTESSMSYARHLFEAMS 90
Query: 193 ERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQ 252
E ++V N + G + LE F LF+++ E+ + TF ++++A A + + G+Q
Sbjct: 91 EPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ 150
Query: 253 LHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGY 312
LH ++K+G DNV+V LI+MY++C ++ A+ VFD + E V +N +I GYA
Sbjct: 151 LHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNR 210
Query: 313 SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSA 372
EAL L+ EM+ +K + T ++ C L SL+ K H +H F + N+A
Sbjct: 211 PNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTA 270
Query: 373 LVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPN 432
L+D ++K G ++DA +F+KM K+ +W+A+I Y NHG+ E+++ +FE+M ++P+
Sbjct: 271 LIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPD 330
Query: 433 HVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALI 492
+TFL +L+ACS +G E G + F M I P HY M++LL R G L++A+ I
Sbjct: 331 EITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFI 390
Query: 493 RGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLK 552
P T +W LL AC + NL+L + +E+++ ++ +YV+L N+Y + K +
Sbjct: 391 DKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWE 450
Query: 553 EAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHG 612
+ + ++ + +P CS IEV H F SGD T +++R +D M+ E+ G
Sbjct: 451 YVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSG 510
Query: 613 YVPEEKTLL-PDVDEQEQRV-LSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAI 670
YVP+ ++ ++++QE+ + L YHSEKLA+ FGL+NT T +++V++ R+C DCHNA
Sbjct: 511 YVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAA 570
Query: 671 KLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
KLI+++ GR++V+RD RFHHF+DG CSCGD+W
Sbjct: 571 KLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 164/321 (51%), Gaps = 4/321 (1%)
Query: 109 RYREALELFEILE--FEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLY 166
R+ LE+F + E G + T+ +L+ AC +++ E +++ + G + ++Y
Sbjct: 106 RFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVY 165
Query: 167 MRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEF 226
+ ++ M+ C + AR +FD + E +V N +I G EA LF ++ ++
Sbjct: 166 VCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKY 225
Query: 227 SDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQ 286
T +++ + A L + +GK +H A K F V V+ ALIDM++KCGS++DA
Sbjct: 226 LKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAV 285
Query: 287 GVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLA 346
+F++M K T W+ +I YA HG +E+++ ++ MR V+ D TF ++ C+
Sbjct: 286 SIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTG 345
Query: 347 SLEHAKQAHAGLV-RHGFGLDIVANSALVDFYSKWGRIEDARHVFDKM-LCKNVISWNAL 404
+E ++ + +V + G I ++VD S+ G +EDA DK+ + + W L
Sbjct: 346 RVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRIL 405
Query: 405 IAGYGNHGRGEEAVELFEQML 425
+A +H + A ++ E++
Sbjct: 406 LAACSSHNNLDLAEKVSERIF 426
>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing protein At3g11460
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 623
Score = 389 bits (998), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/607 (33%), Positives = 350/607 (57%), Gaps = 10/607 (1%)
Query: 100 QIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLST 159
++ +L + E++ L+ + G + ++ ++ +C L +++ ++
Sbjct: 24 RLRELAYQSLFSESISLYRSM-LRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKG 82
Query: 160 GFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSC--NMIIAGMIDSGDYLEAFL 217
G E + ++ ++ M+ +CG++ DAR++F+E P+ + +S N +I+G + +A
Sbjct: 83 GCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAY 142
Query: 218 LFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYS 277
+F + E S T ++ E + +G+ LH +K G V V + I MY
Sbjct: 143 MFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYM 202
Query: 278 KCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSM 337
KCGS+E + +FDEM K + WN +I+GY+ +G + + L+LY +M+ SGV D FT
Sbjct: 203 KCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVS 262
Query: 338 IIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKN 397
++ C L + + + + +GF ++ ++A + Y++ G + AR VFD M K+
Sbjct: 263 VLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKS 322
Query: 398 VISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQ 457
++SW A+I YG HG GE + LF+ M+ G+RP+ F+ VLSACS SGL+++G E+F+
Sbjct: 323 LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFR 382
Query: 458 SMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNL 517
+M R++K++P HY+C+++LLGR G LDEA I P + +W ALL AC+++ N+
Sbjct: 383 AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNV 442
Query: 518 ELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRT-LRRKGLRMLPACSWIE 576
++ + A K+ EP + YV++ NIY+ S K +E IR +R + R P S++E
Sbjct: 443 DMAELAFAKVIEFEPNNIGYYVLMSNIYSDS-KNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Query: 577 VKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQRVLSYHS 636
K + H+FL+GD+SH QT+E++R +D + + + + D E+ HS
Sbjct: 502 HKGRVHLFLAGDRSHEQTEEVHRMLDELETSVMELA-----GNMDCDRGEEVSSTTREHS 556
Query: 637 EKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGM 696
E+LA+AFG++N+ T + ++++ R+C DCH +K ++ + R+ VVRDASRFH+FKDG+
Sbjct: 557 ERLAIAFGILNSIPGTEILVIKNLRVCEDCHVFLKQVSKIVDRQFVVRDASRFHYFKDGV 616
Query: 697 CSCGDYW 703
CSC DYW
Sbjct: 617 CSCKDYW 623
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 56/321 (17%)
Query: 300 WNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLV 359
WN + A E++ LY M SG D F+F I++ C L+ +Q H +
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 360 RHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS--WNALIAGYGNHGRGEEA 417
+ G + +AL+ Y K G + DAR VF++ + +S +NALI+GY + + +A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 418 VELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIE 477
+F +M G+ + VT L ++ C+ + E W R++H C+
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCT---VPEYLW------------LGRSLHGQCV-- 183
Query: 478 LLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEK-LS 536
+G LD A++ N + + C G++E G+ +L+ P K L
Sbjct: 184 ----KGGLDSEVAVL---------NSFITMYMKC---GSVEAGR----RLFDEMPVKGLI 223
Query: 537 NYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLS--GDQSHVQT 594
+ +++ Y+ +G + E+ ++ G V P +S +H+
Sbjct: 224 TWNAVISGYSQNGLAYDVLELYEQMKSSG-----------VCPDPFTLVSVLSSCAHLGA 272
Query: 595 KEIYRKVDRMMLEISKHGYVP 615
K+I +V ++ + +G+VP
Sbjct: 273 KKIGHEVGKL---VESNGFVP 290
>sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protein At5g40410,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H15 PE=2
SV=1
Length = 608
Score = 386 bits (991), Expect = e-106, Method: Compositional matrix adjust.
Identities = 217/590 (36%), Positives = 343/590 (58%), Gaps = 15/590 (2%)
Query: 122 FEGGFDVGSSTYDALISACIGLRSIR--EVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCG 179
F D S+ A + +C+ + R K V S GF D +++ ++R G
Sbjct: 26 FVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGD-----QLVGCYLRLG 80
Query: 180 MMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSR----TFA 235
+ A +LFDEMPER+LVS N +I+G G + F + + S+ G R TF
Sbjct: 81 HDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMM--ISEVGFRPNEVTFL 138
Query: 236 TMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEK 295
+MI A G+ +H +K G + V V A I+ Y K G + + +F+++S K
Sbjct: 139 SMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIK 198
Query: 296 TTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAH 355
V WNT+I + +G +E+ L + R G + D TF ++R C + + A+ H
Sbjct: 199 NLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIH 258
Query: 356 AGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGE 415
++ GF + +AL+D YSK GR+ED+ VF ++ + ++W A++A Y HG G
Sbjct: 259 GLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGR 318
Query: 416 EAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACM 475
+A++ FE M+ G+ P+HVTF +L+ACS SGL E G F++MS+ ++I PR HY+CM
Sbjct: 319 DAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCM 378
Query: 476 IELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKL 535
++LLGR GLL +A+ LI+ P + + +W ALL ACRV + +LG AAE+L+ +EP
Sbjct: 379 VDLLGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDG 438
Query: 536 SNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTK 595
NYV+L NIY++SG K+A+ + +++KGL CS+IE + H F+ GD SH +++
Sbjct: 439 RNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESE 498
Query: 596 EIYRKVDRMMLEI-SKHGYVPEEKTLLPDVDEQ-EQRVLSYHSEKLAVAFGLINTSDWTP 653
+I +K+ + ++ S+ GY + + +L DV E ++ +++ HSEK+A+AFGL+ S P
Sbjct: 499 KIQKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVKEEMINQHSEKIAMAFGLLVVSPMEP 558
Query: 654 LQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+ I ++ RIC DCH K I+++ R I++RD+ RFHHF DG CSC DYW
Sbjct: 559 IIIRKNLRICGDCHETAKAISLIEKRRIIIRDSKRFHHFLDGSCSCSDYW 608
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 384 bits (985), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/592 (35%), Positives = 333/592 (56%), Gaps = 36/592 (6%)
Query: 148 EVKRVFSYMLSTGFEPDLYMRNRVL---LMHVRCGMMIDARRLFDEMPERNLVSCNMIIA 204
E+K++ + ML TG D Y + L + + A+ +FD + N++I
Sbjct: 29 ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 205 GMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGD 264
G S + + LL+ + + + TF ++++A + L Q+H+ K+G+ +
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 265 NVFVSCALIDMYS-------------------------------KCGSIEDAQGVFDEMS 293
+V+ +LI+ Y+ K G ++ A +F +M+
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 294 EKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQ 353
EK + W T+I+GY ++EAL L++EM++S V+ D+ + + + C +L +LE K
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 354 AHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGR 413
H+ L + +D V L+D Y+K G +E+A VF + K+V +W ALI+GY HG
Sbjct: 269 IHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGH 328
Query: 414 GEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYA 473
G EA+ F +M G++PN +TF AVL+ACS +GL E G IF SM RD+ +KP HY
Sbjct: 329 GREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYG 388
Query: 474 CMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPE 533
C+++LLGR GLLDEA I+ P K +W ALL ACR++ N+ELG+ E L ++P
Sbjct: 389 CIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPY 448
Query: 534 KLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQ 593
YV NI+ K +AAE R ++ +G+ +P CS I ++ H FL+GD+SH +
Sbjct: 449 HGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPE 508
Query: 594 TKEIYRKVDRMMLEISKHGYVPEEKTLLPDV--DEQEQRVLSYHSEKLAVAFGLINTSDW 651
++I K M ++ ++GYVPE + +L D+ D++ + ++ HSEKLA+ +GLI T
Sbjct: 509 IEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPG 568
Query: 652 TPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
T ++I+++ R+C DCH KLI+ + R+IV+RD +RFHHF+DG CSCGDYW
Sbjct: 569 TIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 174/370 (47%), Gaps = 49/370 (13%)
Query: 233 TFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGS------IEDAQ 286
T + + R S EL KQ+H+ LK G + + A+ S C S + AQ
Sbjct: 17 TMSCLQRCSKQEEL----KQIHARMLKTGLMQDSY---AITKFLSFCISSTSSDFLPYAQ 69
Query: 287 GVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLA 346
VFD T WN +I G++ E +L LY M S + +TF +++ C+ L+
Sbjct: 70 IVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLS 129
Query: 347 SLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIA 406
+ E Q HA + + G+ D+ A ++L++ Y+ G + A +FD++ + +SWN++I
Sbjct: 130 AFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIK 189
Query: 407 GYGNHGR-------------------------------GEEAVELFEQMLLNGMRPNHVT 435
GY G+ +EA++LF +M + + P++V+
Sbjct: 190 GYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 436 FLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGA 495
LSAC++ G E+G I +++ +I+ ++ +I++ + G ++EA + +
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKT-RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNI 308
Query: 496 PFKTTKNMWAALLT--ACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKE 553
K+ + W AL++ A +G + KF + G++P ++ + +L + +G ++E
Sbjct: 309 KKKSVQ-AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVIT-FTAVLTACSYTGLVEE 366
Query: 554 AAEVIRTLRR 563
+ ++ R
Sbjct: 367 GKLIFYSMER 376
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/574 (35%), Positives = 334/574 (58%), Gaps = 8/574 (1%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
++ A+++ C + + +R+F M D N ++ +++ G + DA +LF +M
Sbjct: 130 SWTAMVNGCFRSGKVDQAERLFYQMPV----KDTAAWNSMVHGYLQFGKVDDALKLFKQM 185
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK 251
P +N++S +I G+ + EA LF ++ SR F +I A A +G
Sbjct: 186 PGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGI 245
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHG 311
Q+H +K+GF +VS +LI Y+ C I D++ VFDE + W +++GY+L+
Sbjct: 246 QVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNK 305
Query: 312 YSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANS 371
E+AL ++ M + + + TF+ + C+ L +L+ K+ H V+ G D +
Sbjct: 306 KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGN 365
Query: 372 ALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP 431
+LV YS G + DA VF K+ K+++SWN++I G HGRG+ A +F QM+ P
Sbjct: 366 SLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEP 425
Query: 432 NHVTFLAVLSACSRSGLSERGWEIFQSMSRD-HKIKPRAMHYACMIELLGREGLLDEAFA 490
+ +TF +LSACS G E+G ++F MS + I + HY CM+++LGR G L EA
Sbjct: 426 DEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEE 485
Query: 491 LIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGK 550
LI K + +W ALL+ACR++ +++ G+ AA ++ ++ + + YV+L NIY S+G+
Sbjct: 486 LIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGR 545
Query: 551 LKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRKVDRMMLEISK 610
+++ +++ G+ P SW+ ++ + H F SGDQ H IY K++ + ++ +
Sbjct: 546 WSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREKLKE 603
Query: 611 HGYVPEEKTLLPDV-DEQEQRVLSYHSEKLAVAFGLINTSDWTPLQIVQSHRICCDCHNA 669
GY P+ ++ L DV DEQ++ +L YHSE+LA+AFGLINT + + + ++++ R+C DCH
Sbjct: 604 LGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTV 663
Query: 670 IKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
IKLI+ V GREIV+RD RFHHFK+G CSCGDYW
Sbjct: 664 IKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 216/474 (45%), Gaps = 61/474 (12%)
Query: 144 RSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMII 203
R I E + VF+ + S P + + +++ + R ++DA LFDEMP R++VS N +I
Sbjct: 49 RRIDEAREVFNQVPS----PHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMI 104
Query: 204 AGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFG 263
+G ++ GD A LF +E + ++ M+ + ++L +M
Sbjct: 105 SGCVECGDMNTAVKLF----DEMPERSVVSWTAMVNGCFRSGKVDQAERLF---YQMPVK 157
Query: 264 DNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEM 323
D + +++ Y + G ++DA +F +M K + W T+I G + S EALDL+ M
Sbjct: 158 DTAAWN-SMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM 216
Query: 324 RDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRI 383
+K F+ +I C + Q H +++ GF + +++L+ FY+ RI
Sbjct: 217 LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRI 276
Query: 384 EDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSAC 443
D+R VFD+ + + V W AL++GY + + E+A+ +F ML N + PN TF + L++C
Sbjct: 277 GDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSC 336
Query: 444 SRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFA------------- 490
S G + G E+ ++ ++ A ++ + G +++A +
Sbjct: 337 SALGTLDWGKEM-HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSW 395
Query: 491 -----------------LIRGAPFKTTKN----MWAALLTACRVNGNLELGKFAAEKLYG 529
+I G + K + LL+AC G LE G+ + Y
Sbjct: 396 NSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGR---KLFYY 452
Query: 530 MEP------EKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKG-----LRMLPAC 572
M K+ +Y +++I GKLKEA E+I + K L +L AC
Sbjct: 453 MSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSAC 506
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 156/317 (49%), Gaps = 7/317 (2%)
Query: 107 NKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLY 166
N+R EAL+LF+ + S + +I+AC + +V ++ GF + Y
Sbjct: 203 NERSGEALDLFKNM-LRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEY 261
Query: 167 MRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEF 226
+ ++ + C + D+R++FDE + +++G + + +A +F +
Sbjct: 262 VSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNS 321
Query: 227 SDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQ 286
TFA+ + + + L + GK++H A+K+G + FV +L+ MYS G++ DA
Sbjct: 322 ILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAV 381
Query: 287 GVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLA 346
VF ++ +K+ V WN+II G A HG + A ++ +M + D TF+ ++ C+
Sbjct: 382 SVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCG 441
Query: 347 SLEHAKQAHAGLVRHGFGLD--IVANSALVDFYSKWGRIEDARHVFDKMLCK-NVISWNA 403
LE ++ + +D I + +VD + G++++A + ++M+ K N + W A
Sbjct: 442 FLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLA 501
Query: 404 LIAGYGNHG---RGEEA 417
L++ H RGE+A
Sbjct: 502 LLSACRMHSDVDRGEKA 518
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 211/606 (34%), Positives = 342/606 (56%), Gaps = 2/606 (0%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S I V N + E L+LF + G + G T+ ++ AC S + + S ++
Sbjct: 81 SLINGFVNNHLFHETLDLFLSIRKHGLYLHGF-TFPLVLKACTRASSRKLGIDLHSLVVK 139
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
GF D+ +L ++ G + DA +LFDE+P+R++V+ + +G SG + EA L
Sbjct: 140 CGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDL 199
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
F + E S ++ A + + G+ + +M N FV L+++Y+K
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMI 338
CG +E A+ VFD M EK V W+T+I GYA + + +E ++L+ +M +K D F+
Sbjct: 260 CGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGF 319
Query: 339 IRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
+ C L +L+ + + + RH F ++ +AL+D Y+K G + VF +M K++
Sbjct: 320 LSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDI 379
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQS 458
+ NA I+G +G + + +F Q G+ P+ TFL +L C +GL + G F +
Sbjct: 380 VIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNA 439
Query: 459 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
+S + +K HY CM++L GR G+LD+A+ LI P + +W ALL+ CR+ + +
Sbjct: 440 ISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQ 499
Query: 519 LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVK 578
L + ++L +EP NYV L NIY+ G+ EAAEV + +KG++ +P SWIE++
Sbjct: 500 LAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELE 559
Query: 579 KQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQE-QRVLSYHSE 637
+ H FL+ D+SH + +IY K++ + E+ G+VP + + DV+E+E +RVL YHSE
Sbjct: 560 GKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSE 619
Query: 638 KLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMC 697
KLAVA GLI+T +++V++ R+C DCH +KLI+ +T REIVVRD +RFH F +G C
Sbjct: 620 KLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSC 679
Query: 698 SCGDYW 703
SC DYW
Sbjct: 680 SCNDYW 685
Score = 116 bits (290), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 152/325 (46%), Gaps = 43/325 (13%)
Query: 300 WNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLV 359
+N++I G+ + E LDL+ +R G+ + FTF ++++ CTR +S + H+ +V
Sbjct: 79 YNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVV 138
Query: 360 RHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVE 419
+ GF D+ A ++L+ YS GR+ DA +FD++ ++V++W AL +GY GR EA++
Sbjct: 139 KCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAID 198
Query: 420 LFEQMLLNGMRPNHVTFLAVLSAC-----------------------------------S 444
LF++M+ G++P+ + VLSAC +
Sbjct: 199 LFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYA 258
Query: 445 RSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMW 504
+ G E+ +F SM + M +EG+ E F + K +
Sbjct: 259 KCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGI--ELFLQMLQENLKPDQFSI 316
Query: 505 AALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVV---LLNIYNSSGKLKEAAEVIRTL 561
L++C G L+LG++ + E L+N + L+++Y G + EV + +
Sbjct: 317 VGFLSSCASLGALDLGEWGISLID--RHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Query: 562 RRKGLRMLPACSWIEVKKQPHVFLS 586
+ K + ++ A + + K HV LS
Sbjct: 375 KEKDIVIMNA-AISGLAKNGHVKLS 398
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 44/259 (16%)
Query: 347 SLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIA 406
++ H KQ H L+ H D + L+ + + + + +F N+ +N+LI
Sbjct: 25 TVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLIN 84
Query: 407 GYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSR---DH 463
G+ N+ E ++LF + +G+ + TF VL AC+R+ + G ++ + + +H
Sbjct: 85 GFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNH 144
Query: 464 KIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAAL---------------- 507
+ ++ + G L++A L P ++ W AL
Sbjct: 145 DVAA----MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVT-WTALFSGYTTSGRHREAIDL 199
Query: 508 -------------------LTACRVNGNLELGKFAAEKLYGMEPEKLSNY-VVLLNIYNS 547
L+AC G+L+ G++ + + ME +K S L+N+Y
Sbjct: 200 FKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAK 259
Query: 548 SGKLKEAAEVIRTLRRKGL 566
GK+++A V ++ K +
Sbjct: 260 CGKMEKARSVFDSMVEKDI 278
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 198/606 (32%), Positives = 336/606 (55%), Gaps = 34/606 (5%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
T+ LI A + S+ + + + + D+++ N ++ + CG + A ++F +
Sbjct: 133 TFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI 192
Query: 192 PERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGK 251
E+++VS N +I G + G +A LF + E T ++ A A + + G+
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 252 QLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYAL-- 309
Q+ S + N+ ++ A++DMY+KCGSIEDA+ +FD M EK V W T++ GYA+
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 310 -----------------------------HGYSEEALDLYYEMR-DSGVKMDHFTFSMII 339
+G EAL +++E++ +K++ T +
Sbjct: 313 DYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTL 372
Query: 340 RICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVI 399
C ++ +LE + H+ + +HG ++ SAL+ YSK G +E +R VF+ + ++V
Sbjct: 373 SACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVF 432
Query: 400 SWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSM 459
W+A+I G HG G EAV++F +M ++PN VTF V ACS +GL + +F M
Sbjct: 433 VWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQM 492
Query: 460 SRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLEL 519
++ I P HYAC++++LGR G L++A I P + ++W ALL AC+++ NL L
Sbjct: 493 ESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNL 552
Query: 520 GKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKK 579
+ A +L +EP +V+L NIY GK + +E+ + +R GL+ P CS IE+
Sbjct: 553 AEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDG 612
Query: 580 QPHVFLSGDQSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQE--QRVLSYHSE 637
H FLSGD +H ++++Y K+ +M ++ +GY PE +L ++E+E ++ L+ HSE
Sbjct: 613 MIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSE 672
Query: 638 KLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMC 697
KLA+ +GLI+T ++++++ R+C DCH+ KLI+ + REI+VRD RFHHF++G C
Sbjct: 673 KLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQC 732
Query: 698 SCGDYW 703
SC D+W
Sbjct: 733 SCNDFW 738
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 124/453 (27%), Positives = 224/453 (49%), Gaps = 48/453 (10%)
Query: 131 STYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGM--MIDARRLF 188
S + +LI C+ S+R++K+ +M+ TG D Y +++ M + AR++F
Sbjct: 31 SRHISLIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVF 87
Query: 189 DEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDC--GSRTFATMIRASAGLEL 246
DE+P+ N + N +I D + + FLD+ E S C TF +I+A+A +
Sbjct: 88 DEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSE-SQCYPNKYTFPFLIKAAAEVSS 146
Query: 247 ISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAG 306
+S+G+ LH A+K G +VFV+ +LI Y CG ++ A VF + EK V WN++I G
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 307 YALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLD 366
+ G ++AL+L+ +M VK H T ++ C ++ +LE +Q + + + ++
Sbjct: 207 FVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVN 266
Query: 367 IVANSALVDFYSKWGRIEDARHVFD-------------------------------KMLC 395
+ +A++D Y+K G IEDA+ +FD M
Sbjct: 267 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQ 326
Query: 396 KNVISWNALIAGYGNHGRGEEAVELFEQMLLN-GMRPNHVTFLAVLSACSRSGLSERG-W 453
K++++WNALI+ Y +G+ EA+ +F ++ L M+ N +T ++ LSAC++ G E G W
Sbjct: 327 KDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRW 386
Query: 454 EIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRV 513
S + H I+ + +I + + G L+++ + K +W+A++ +
Sbjct: 387 --IHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAM 443
Query: 514 NGNLELGKFAAEKLYGMEPEKL-SNYVVLLNIY 545
+G G A + Y M+ + N V N++
Sbjct: 444 HG---CGNEAVDMFYKMQEANVKPNGVTFTNVF 473
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 2/207 (0%)
Query: 107 NKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLY 166
N + EAL +F L+ + + T + +SAC + ++ + + SY+ G + +
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 167 MRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEF 226
+ + ++ M+ +CG + +R +F+ + +R++ + +I G+ G EA +F + E
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEAN 461
Query: 227 SDCGSRTFATMIRASAGLELISVGKQL-HSCALKMGFGDNVFVSCALIDMYSKCGSIEDA 285
TF + A + L+ + L H G ++D+ + G +E A
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKA 521
Query: 286 QGVFDEMS-EKTTVGWNTIIAGYALHG 311
+ M +T W ++ +H
Sbjct: 522 VKFIEAMPIPPSTSVWGALLGACKIHA 548
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 202/546 (36%), Positives = 322/546 (58%), Gaps = 13/546 (2%)
Query: 163 PDLYMRNRVLLMHVRC--GMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFL 220
PD R ++H C G + +AR +FDEM ER++++ ++ G + +A +F
Sbjct: 168 PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF- 226
Query: 221 DLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCG 280
D+ E ++ ++ +M+ I ++L ++ V A+I + G
Sbjct: 227 DVMPEKTEV---SWTSMLMGYVQNGRIEDAEEL----FEVMPVKPVIACNAMISGLGQKG 279
Query: 281 SIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIR 340
I A+ VFD M E+ W T+I + +G+ EALDL+ M+ GV+ T I+
Sbjct: 280 EIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILS 339
Query: 341 ICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVIS 400
+C LASL H KQ HA LVR F +D+ S L+ Y K G + ++ +FD+ K++I
Sbjct: 340 VCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM 399
Query: 401 WNALIAGYGNHGRGEEAVELFEQMLLNG-MRPNHVTFLAVLSACSRSGLSERGWEIFQSM 459
WN++I+GY +HG GEEA+++F +M L+G +PN VTF+A LSACS +G+ E G +I++SM
Sbjct: 400 WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
Query: 460 SRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLEL 519
+KP HYACM+++LGR G +EA +I + +W +LL ACR + L++
Sbjct: 460 ESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDV 519
Query: 520 GKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKK 579
+F A+KL +EPE Y++L N+Y S G+ + AE+ + ++ + +R P CSW EV+
Sbjct: 520 AEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVEN 579
Query: 580 QPHVFLSGD-QSHVQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVDEQEQ-RVLSYHSE 637
+ H F G SH + + I + +D + + + GY P+ L DVDE+E+ L YHSE
Sbjct: 580 KVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPDCSYALHDVDEEEKVNSLKYHSE 639
Query: 638 KLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMC 697
+LAVA+ L+ S+ P++++++ R+C DCH AIK+I+ V REI++RDA+RFHHF++G C
Sbjct: 640 RLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISKVKEREIILRDANRFHHFRNGEC 699
Query: 698 SCGDYW 703
SC DYW
Sbjct: 700 SCKDYW 705
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 110/514 (21%), Positives = 229/514 (44%), Gaps = 71/514 (13%)
Query: 88 TQMKKPSAGICSQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIR 147
T + P+A + +I L + EA +LF+ + + S+++++++ R
Sbjct: 13 TTIPPPTANV--RITHLSRIGKIHEARKLFDSCDSKS-----ISSWNSMVAGYFANLMPR 65
Query: 148 EVKRVFSYMLSTGFEPD--LYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAG 205
+ +++F M PD + N ++ +++ G + +AR++FD MPERN+VS ++ G
Sbjct: 66 DARKLFDEM------PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKG 119
Query: 206 MIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDN 265
+ +G A LF + E+ ++ M+ + + G+ +C L D
Sbjct: 120 YVHNGKVDVAESLFWKMPEK----NKVSWTVML-----IGFLQDGRIDDACKLYEMIPDK 170
Query: 266 VFVS-CALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMR 324
++ ++I K G +++A+ +FDEMSE++ + W T++ GY + ++A ++ M
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMP 230
Query: 325 DSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIE 384
+ +++ ++ + +E A++ + ++A +A++ + G I
Sbjct: 231 EK----TEVSWTSMLMGYVQNGRIEDAEELFEVMPVK----PVIACNAMISGLGQKGEIA 282
Query: 385 DARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS 444
AR VFD M +N SW +I + +G EA++LF M G+RP T +++LS C+
Sbjct: 283 KARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCA 342
Query: 445 RSGLSERGWEIFQSMSR------------------------------DHKIKPRAMHYAC 474
G ++ + R D + +
Sbjct: 343 SLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNS 402
Query: 475 MIELLGREGLLDEAFALIRGAPF----KTTKNMWAALLTACRVNGNLELG---KFAAEKL 527
+I GL +EA + P K + + A L+AC G +E G + E +
Sbjct: 403 IISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESV 462
Query: 528 YGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTL 561
+G++P ++Y ++++ +G+ EA E+I ++
Sbjct: 463 FGVKP-ITAHYACMVDMLGRAGRFNEAMEMIDSM 495
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 378 bits (971), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/593 (34%), Positives = 321/593 (54%), Gaps = 1/593 (0%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
E L+LF+ + F G + +C I E K+ L G ++RN +
Sbjct: 118 EVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTL 177
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGS 231
+ M+ C +A R+ D++P +L + ++G ++ G + E + E +
Sbjct: 178 VYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNN 237
Query: 232 RTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDE 291
T+ + +R + L +++ Q+HS ++ GF V ALI+MY KCG + AQ VFD+
Sbjct: 238 LTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDD 297
Query: 292 MSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHA 351
+ TI+ Y EEAL+L+ +M V + +TF++++ L+ L+
Sbjct: 298 THAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQG 357
Query: 352 KQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNH 411
H +++ G+ ++ +ALV+ Y+K G IEDAR F M +++++WN +I+G +H
Sbjct: 358 DLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHH 417
Query: 412 GRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMH 471
G G EA+E F++M+ G PN +TF+ VL ACS G E+G F + + ++P H
Sbjct: 418 GLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQH 477
Query: 472 YACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGME 531
Y C++ LL + G+ +A +R AP + W LL AC V N LGK AE
Sbjct: 478 YTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKY 537
Query: 532 PEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSH 591
P YV+L NI+ S + + A+V + +G++ P SWI ++ Q HVFL+ D H
Sbjct: 538 PNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQH 597
Query: 592 VQTKEIYRKVDRMMLEISKHGYVPEEKTLLPDVD-EQEQRVLSYHSEKLAVAFGLINTSD 650
+ IY KV +M +I GY P+ DVD EQ + LSYHSEKLAVA+GLI T +
Sbjct: 598 PEITLIYAKVKEVMSKIKPLGYSPDVAGAFHDVDEEQREDNLSYHSEKLAVAYGLIKTPE 657
Query: 651 WTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
+PL + ++ RIC DCH+AIKLI+ ++ R IV+RD++RFHHF DG CSC DYW
Sbjct: 658 KSPLYVTKNVRICDDCHSAIKLISKISKRYIVIRDSNRFHHFLDGQCSCCDYW 710
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/607 (33%), Positives = 357/607 (58%), Gaps = 4/607 (0%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
S I+ V N Y+EALE F + G + ++I+A L ++ + +Y++
Sbjct: 356 SLIKGYVQNLMYKEALEFFSDM-IAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLL 218
G++ +L + N ++ M+ +C + R F M +++L+S +IAG + ++EA L
Sbjct: 415 HGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALEL 474
Query: 219 FLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSK 278
F D+ ++ + +++RAS+ L+ + + K++H L+ G D V + L+D+Y K
Sbjct: 475 FRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGK 533
Query: 279 CGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMI 338
C ++ A VF+ + K V W ++I+ AL+G EA++L+ M ++G+ D I
Sbjct: 534 CRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593
Query: 339 IRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
+ L++L ++ H L+R GF L+ A+VD Y+ G ++ A+ VFD++ K +
Sbjct: 594 LSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGL 653
Query: 399 ISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQS 458
+ + ++I YG HG G+ AVELF++M + P+H++FLA+L ACS +GL + G +
Sbjct: 654 LQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKI 713
Query: 459 MSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLE 518
M +++++P HY C++++LGR + EAF ++ + T +W ALL ACR + E
Sbjct: 714 MEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKE 773
Query: 519 LGKFAAEKLYGMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVK 578
+G+ AA++L +EP+ N V++ N++ G+ + +V ++ G+ P CSWIE+
Sbjct: 774 IGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMD 833
Query: 579 KQPHVFLSGDQSHVQTKEIYRKVDRMMLEISKH-GYVPEEKTLLPDVDEQEQ-RVLSYHS 636
+ H F + D+SH ++KEIY K+ + ++ + GYV + K +L +VDE E+ ++L HS
Sbjct: 834 GKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHS 893
Query: 637 EKLAVAFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGM 696
E++A+A+GL+ T D L+I ++ R+C DCH KL++ + R+IV+RDA+RFHHF+ G+
Sbjct: 894 ERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGL 953
Query: 697 CSCGDYW 703
CSCGD W
Sbjct: 954 CSCGDSW 960
Score = 155 bits (393), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 170/314 (54%), Gaps = 5/314 (1%)
Query: 136 LISACIGLRSIREVKRVFSYMLST--GFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPE 193
++ C R++ + +++ S + T FE D ++ +++ M+ +CG + DA ++FDEMP+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFDEMPD 144
Query: 194 RNLVSCNMIIAGMIDSGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQL 253
R + N +I + +G+ A L+ ++ E G +F +++A A L I G +L
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 254 HSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEK-TTVGWNTIIAGYALHGY 312
HS +K+G+ F+ AL+ MY+K + A+ +FD EK V WN+I++ Y+ G
Sbjct: 205 HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGK 264
Query: 313 SEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRHG-FGLDIVANS 371
S E L+L+ EM +G + +T + C + + K+ HA +++ ++ +
Sbjct: 265 SLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCN 324
Query: 372 ALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRP 431
AL+ Y++ G++ A + +M +V++WN+LI GY + +EA+E F M+ G +
Sbjct: 325 ALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKS 384
Query: 432 NHVTFLAVLSACSR 445
+ V+ ++++A R
Sbjct: 385 DEVSMTSIIAASGR 398
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 203/436 (46%), Gaps = 38/436 (8%)
Query: 99 SQIEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLS 158
+ I V N AL L+ + EG +G S++ AL+ AC LR IR + S ++
Sbjct: 152 TMIGAYVSNGEPASALALYWNMRVEG-VPLGLSSFPALLKACAKLRDIRSGSELHSLLVK 210
Query: 159 TGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPER-NLVSCNMIIAGMIDSGDYLEAFL 217
G+ ++ N ++ M+ + + ARRLFD E+ + V N I++ SG LE
Sbjct: 211 LGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLE 270
Query: 218 LFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMG-FGDNVFVSCALIDMY 276
LF ++ S T + + A G +GK++H+ LK ++V ALI MY
Sbjct: 271 LFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMY 330
Query: 277 SKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFS 336
++CG + A+ + +M+ V WN++I GY + +EAL+ + +M +G K D + +
Sbjct: 331 TRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMT 390
Query: 337 MIIRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCK 396
II RL++L + HA +++HG+ ++ + L+D YSK F +M K
Sbjct: 391 SIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDK 450
Query: 397 NVISWNALIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS------------ 444
++ISW +IAGY + EA+ELF + M + + ++L A S
Sbjct: 451 DLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIH 510
Query: 445 ----RSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTT 500
R GL + + Q+ D K R M YA + F I+G +
Sbjct: 511 CHILRKGLLD---TVIQNELVDVYGKCRNMGYATRV------------FESIKGKDVVS- 554
Query: 501 KNMWAALLTACRVNGN 516
W +++++ +NGN
Sbjct: 555 ---WTSMISSSALNGN 567
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 135/263 (51%), Gaps = 2/263 (0%)
Query: 233 TFATMIRASAGLELISVGKQLHSCALKMGFGDNV-FVSCALIDMYSKCGSIEDAQGVFDE 291
FA ++ +S G+QLHS K + F++ L+ MY KCGS++DA+ VFDE
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDE 141
Query: 292 MSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMIIRICTRLASLEHA 351
M ++T WNT+I Y +G AL LY+ MR GV + +F +++ C +L +
Sbjct: 142 MPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSG 201
Query: 352 KQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCK-NVISWNALIAGYGN 410
+ H+ LV+ G+ +ALV Y+K + AR +FD K + + WN++++ Y
Sbjct: 202 SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYST 261
Query: 411 HGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAM 470
G+ E +ELF +M + G PN T ++ L+AC ++ G EI S+ +
Sbjct: 262 SGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 471 HYACMIELLGREGLLDEAFALIR 493
+I + R G + +A ++R
Sbjct: 322 VCNALIAMYTRCGKMPQAERILR 344
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 206/602 (34%), Positives = 339/602 (56%), Gaps = 40/602 (6%)
Query: 140 CIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSC 199
C R++ K + ++++ G + N ++ ++ +CG A ++FDEMP R+ ++
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 200 NMIIAGMID---SGDYLEAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSC 256
++ + SG L F D F+ +++A A L I G+Q+H
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPD--DFVFSALVKACANLGSIDHGRQVHCH 130
Query: 257 ALKMGFGDNVFVSCALIDMYSKCGSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEA 316
+ + ++ V +L+DMY+KCG + A+ VFD + K T+ W +++GYA G EEA
Sbjct: 131 FIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA 190
Query: 317 LDLY-------------------------------YEMRDSGVK-MDHFTFSMIIRICTR 344
L+L+ EMR V +D S I+ C
Sbjct: 191 LELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACAN 250
Query: 345 LASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNAL 404
LA+ +Q H ++ GF + ++AL+D Y+K + A+ +F +M ++V+SW +L
Sbjct: 251 LAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSL 310
Query: 405 IAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHK 464
I G HG+ E+A+ L++ M+ +G++PN VTF+ ++ ACS G E+G E+FQSM++D+
Sbjct: 311 IVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYG 370
Query: 465 IKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAA 524
I+P HY C+++LLGR GLLDEA LI PF + WAALL+AC+ G ++G A
Sbjct: 371 IRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIA 430
Query: 525 EKLY-GMEPEKLSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHV 583
+ L + + S Y++L NIY S+ + +E R L +R P S +EV+K+ V
Sbjct: 431 DHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEV 490
Query: 584 FLSGDQSHVQTKEIYRKVDRMMLEIS-KHGYVPEEKTLLPDVDEQE-QRVLSYHSEKLAV 641
F +G+ SH ++I+R + ++ E+ ++GYVP+ +L D+DEQE +++L +HSE+ AV
Sbjct: 491 FYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSAV 550
Query: 642 AFGLINTSDWTPLQIVQSHRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGD 701
A+GL+ TP++IV++ R+C DCH +K I+ +T REI+VRDA+R+HHFK G CSC D
Sbjct: 551 AYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCND 610
Query: 702 YW 703
+W
Sbjct: 611 FW 612
Score = 142 bits (359), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 160/328 (48%), Gaps = 34/328 (10%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDE- 190
+ AL+ AC L SI ++V + + + + D +++ ++ M+ +CG++ A+ +FD
Sbjct: 107 VFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSI 166
Query: 191 ------------------------------MPERNLVSCNMIIAGMIDSGDYLEAFLLFL 220
+P +NL S +I+G + SG LEAF +F
Sbjct: 167 RVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFT 226
Query: 221 DLWEEFSDC-GSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKC 279
++ E D ++++ A A L G+Q+H + +GF VF+S ALIDMY+KC
Sbjct: 227 EMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKC 286
Query: 280 GSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRDSGVKMDHFTFSMII 339
+ A+ +F M + V W ++I G A HG +E+AL LY +M GVK + TF +I
Sbjct: 287 SDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLI 346
Query: 340 RICTRLASLEHAKQAHAGLVR-HGFGLDIVANSALVDFYSKWGRIEDARHVFDKM-LCKN 397
C+ + +E ++ + + +G + + L+D + G +++A ++ M +
Sbjct: 347 YACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPD 406
Query: 398 VISWNALIAGYGNHGRGEEAVELFEQML 425
+W AL++ GRG+ + + + ++
Sbjct: 407 EPTWAALLSACKRQGRGQMGIRIADHLV 434
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 339 IRICTRLASLEHAKQAHAGLVRHGFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNV 398
+++C R +L AK HA +V+ G + LV+ Y K G A VFD+M ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 399 ISWNALIAGYGNHG-RGEEAVELFEQMLLNGMRPNHVTFLAVLSACSRSGLSERGWE--- 454
I+W +++ G+ +G+RP+ F A++ AC+ G + G +
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 455 --IFQSMSRDHKIKPRAMHYACMIELLGREGLLDEAFALIRGAPFKTTKNMWAALLTACR 512
I + D +K + ++++ + GLL+ A A+ K T + W A+++
Sbjct: 130 HFIVSEYANDEVVK------SSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYA 182
Query: 513 VNGNLELGKFAAEKLYGMEPEK-LSNYVVLLNIYNSSGKLKEAAEVIRTLRRKGLRML 569
+G E A +L+ + P K L ++ L++ + SGK EA V +RR+ + +L
Sbjct: 183 KSGRKE----EALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDIL 236
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 89/193 (46%), Gaps = 1/193 (0%)
Query: 101 IEKLVLNKRYREALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTG 160
I V + + EA +F + E + +++ AC L + ++V +++ G
Sbjct: 209 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG 268
Query: 161 FEPDLYMRNRVLLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFL 220
F+ +++ N ++ M+ +C +I A+ +F M R++VS +I GM G +A L+
Sbjct: 269 FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYD 328
Query: 221 DLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALK-MGFGDNVFVSCALIDMYSKC 279
D+ TF +I A + + + G++L K G ++ L+D+ +
Sbjct: 329 DMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRS 388
Query: 280 GSIEDAQGVFDEM 292
G +++A+ + M
Sbjct: 389 GLLDEAENLIHTM 401
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 372 bits (956), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/524 (36%), Positives = 303/524 (57%), Gaps = 38/524 (7%)
Query: 214 EAFLLFLDLWEEFSDCGSRTFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALI 273
+AFLL++ L + TF++++++ + GK +H+ LK G G + +V+ L+
Sbjct: 113 QAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLIHTHVLKFGLGIDPYVATGLV 168
Query: 274 DMYSKCGSIEDAQGVFDEMSEKT-------------------------------TVGWNT 302
D+Y+K G + AQ VFD M E++ V WN
Sbjct: 169 DVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNV 228
Query: 303 IIAGYALHGYSEEALDLYYEMRDSG-VKMDHFTFSMIIRICTRLASLEHAKQAHAGLVRH 361
+I GYA HG+ +AL L+ ++ G K D T + C+++ +LE + H +
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 362 GFGLDIVANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNALIAGYGNHGRGEEAVELF 421
L++ + L+D YSK G +E+A VF+ K++++WNA+IAGY HG ++A+ LF
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 422 EQML-LNGMRPNHVTFLAVLSACSRSGLSERGWEIFQSMSRDHKIKPRAMHYACMIELLG 480
+M + G++P +TF+ L AC+ +GL G IF+SM +++ IKP+ HY C++ LLG
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 481 REGLLDEAFALIRGAPFKTTKNMWAALLTACRVNGNLELGKFAAEKLYGMEPEKLSNYVV 540
R G L A+ I+ +W+++L +C+++G+ LGK AE L G+ + YV+
Sbjct: 409 RAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVL 468
Query: 541 LLNIYNSSGKLKEAAEVIRTLRRKGLRMLPACSWIEVKKQPHVFLSGDQSHVQTKEIYRK 600
L NIY S G + A+V ++ KG+ P S IE++ + H F +GD+ H ++KEIY
Sbjct: 469 LSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTM 528
Query: 601 VDRMMLEISKHGYVPEEKTLLPDVDEQE-QRVLSYHSEKLAVAFGLINTSDWTPLQIVQS 659
+ ++ I HGYVP T+L D++E E ++ L HSE+LA+A+GLI+T +PL+I ++
Sbjct: 529 LRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKN 588
Query: 660 HRICCDCHNAIKLIAMVTGREIVVRDASRFHHFKDGMCSCGDYW 703
R+C DCH KLI+ +TGR+IV+RD +RFHHF DG CSCGD+W
Sbjct: 589 LRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 148/327 (45%), Gaps = 61/327 (18%)
Query: 132 TYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRVLLMHVRCGMMIDARRLFDEM 191
T+ +L+ +C S + K + +++L G D Y+ ++ ++ + G ++ A+++FD M
Sbjct: 132 TFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM 187
Query: 192 PERNLVSC-------------------------------NMIIAGMIDSGDYLEAFLLFL 220
PER+LVS N++I G G +A +LF
Sbjct: 188 PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQ 247
Query: 221 DLWEEFSDCGSR-TFATMIRASAGLELISVGKQLHSCALKMGFGDNVFVSCALIDMYSKC 279
L E T + A + + + G+ +H NV V LIDMYSKC
Sbjct: 248 KLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 280 GSIEDAQGVFDEMSEKTTVGWNTIIAGYALHGYSEEALDLYYEMRD-SGVKMDHFTFSMI 338
GS+E+A VF++ K V WN +IAGYA+HGYS++AL L+ EM+ +G++ TF
Sbjct: 308 GSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 339 IRICTRLASLEHAKQAHAGLVRHG----------FGL--DIVANSALVDFYSKWGRIEDA 386
++ C AHAGLV G +G+ I LV + G+++ A
Sbjct: 368 LQAC-----------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRA 416
Query: 387 RHVFDKM-LCKNVISWNALIAGYGNHG 412
M + + + W++++ HG
Sbjct: 417 YETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 99/206 (48%), Gaps = 9/206 (4%)
Query: 112 EALELFEILEFEGGFDVGSSTYDALISACIGLRSIREVKRVFSYMLSTGFEPDLYMRNRV 171
+AL LF+ L EG T A +SAC + ++ + + ++ S+ ++ + +
Sbjct: 241 DALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGL 300
Query: 172 LLMHVRCGMMIDARRLFDEMPERNLVSCNMIIAGMIDSGDYLEAFLLFLDLWE----EFS 227
+ M+ +CG + +A +F++ P +++V+ N +IAG G +A LF ++ + +
Sbjct: 301 IDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPT 360
Query: 228 DCGSRTFATMIRASAGLELISVGKQL-HSCALKMGFGDNVFVSCALIDMYSKCGSIEDAQ 286
D TF ++A A L++ G ++ S + G + L+ + + G ++ A
Sbjct: 361 DI---TFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAY 417
Query: 287 GVFDEMS-EKTTVGWNTIIAGYALHG 311
M+ + +V W++++ LHG
Sbjct: 418 ETIKNMNMDADSVLWSSVLGSCKLHG 443
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Query: 347 SLEHAKQAHAGLVRHGFGLDI---VANSALVDFYSKWGRIEDARHVFDKMLCKNVISWNA 403
S++ Q HA ++RH L V N L Y+ G+I + +F + + ++ + A
Sbjct: 41 SVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTA 100
Query: 404 LIAGYGNHGRGEEAVELFEQMLLNGMRPNHVTFLAVLSACS-RSG 447
I +G ++A L+ Q+L + + PN TF ++L +CS +SG
Sbjct: 101 AINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKSG 145
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 255,359,504
Number of Sequences: 539616
Number of extensions: 10528852
Number of successful extensions: 32445
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 393
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 24792
Number of HSP's gapped (non-prelim): 2238
length of query: 703
length of database: 191,569,459
effective HSP length: 125
effective length of query: 578
effective length of database: 124,117,459
effective search space: 71739891302
effective search space used: 71739891302
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)