BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005321
(702 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O1U|A Chain A, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1U|B Chain B, Structure Of Full Length Grp94 With Amp-Pnp Bound
pdb|2O1V|A Chain A, Structure Of Full Length Grp94 With Adp Bound
pdb|2O1V|B Chain B, Structure Of Full Length Grp94 With Adp Bound
Length = 666
Score = 600 bits (1546), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/683 (47%), Positives = 430/683 (62%), Gaps = 49/683 (7%)
Query: 5 HMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDA 64
HM +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L
Sbjct: 20 HM--SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAG 77
Query: 65 QPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADV 120
EL ++I DK L + D+GVGMT+ +LV NLGTIA+SGT EF+ EA + G
Sbjct: 78 NEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQST 137
Query: 121 S-MIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKI 179
S +IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT I
Sbjct: 138 SELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTI 196
Query: 180 TLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWXXXXXXXXXXXXXXXXXXXXXXXXX 239
TL LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 197 TLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTV-------------- 242
Query: 240 XXXXXXXXXXXXXXXXXXXXHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHL 299
+W+L+N KPIW R +EV +EY +FYKS + + +D +
Sbjct: 243 --------------------WDWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPM 282
Query: 300 AVKHFSVEGQLEFKAILFVPRRAPFDLFD--TRKKLNNIKLYVRRVFIMDNCEELIPEYL 357
A HF+ EG++ FK+ILFVP AP LFD KK + IKLYVRRVFI D+ +++P+YL
Sbjct: 283 AYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYL 342
Query: 358 GFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFS 417
FVKGVVDSDDLPLN+SRETLQQ+K+LKVIRK LV+K ++M +IA+ K + F+ F
Sbjct: 343 NFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFG 401
Query: 418 KNIKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477
NIKLG+ ED NR +LA LLRF S+ ++TSL YV RMKE Q IY++ G SRK
Sbjct: 402 TNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEA 461
Query: 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATXXXXXXXXXXXXXXXXX 537
E+SPF+ERL KKGYEV+++ + +DEY + L E+DGK+ +
Sbjct: 462 ESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRFQNVAKEGVKFDESEKTKESRE 521
Query: 538 XXXXSFENLCKTIKE-ILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQAL-- 594
FE L +K+ L D +EK VVS R+ +SPC LV +YGWS NMERIMKAQA
Sbjct: 522 AIEKEFEPLLNWMKDKALKDKIEKAVVSQRLTESPCALVASQYGWSGNMERIMKAQAYQT 581
Query: 595 -RDXXXXXXXXXKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXXTSGFSL 653
+D KKT EINP + +++++ +R + D++DK+V D SG+ L
Sbjct: 582 GKDISTNYYASQKKTFEINPRHPLIKDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLL 641
Query: 654 DDPNTFAARIHRMLKLGLSIEED 676
D + RI RML+L L+I+ D
Sbjct: 642 PDTKAYGDRIERMLRLSLNIDPD 664
>pdb|3Q6M|A Chain A, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|B Chain B, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6M|C Chain C, Crystal Structure Of Human Mc-Hsp90 In C2221 Space Group
pdb|3Q6N|A Chain A, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|B Chain B, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|C Chain C, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|D Chain D, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|E Chain E, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
pdb|3Q6N|F Chain F, Crystal Structure Of Human Mc-Hsp90 In P21 Space Group
Length = 448
Score = 589 bits (1518), Expect = e-168, Method: Compositional matrix adjust.
Identities = 288/440 (65%), Positives = 341/440 (77%), Gaps = 7/440 (1%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
KPIW R P+++T EEY FYKSLTNDWEDHLAVKHFSVEGQLEF+A+LFVPRRAPFDLF+
Sbjct: 4 KPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFE 63
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
RKK NNIKLYVRRVFIMDNCEELIPEYL F++GVVDS+DLPLNISRE LQQ+KILKVIR
Sbjct: 64 NRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIR 123
Query: 389 KNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDE 448
KNLVKKC+E+F E+AE+KE+Y KFY+ FSKNIKLGIHEDSQNR KL++LLR++++ SGDE
Sbjct: 124 KNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDE 183
Query: 449 MTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQL 508
M SLKDY TRMKE QK IYYITGE++ V NS F+ERL+K G EV++M++ IDEY V QL
Sbjct: 184 MVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQL 243
Query: 509 KEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKEILGDNVEKVVVSDRIV 568
KE++GK LVS T FENLCK +K+IL VEKVVVS+R+V
Sbjct: 244 KEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLV 303
Query: 569 DSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXXKKTMEINPDNGIMEELRKRAEVD 628
SPCC+VT YGW+ANMERIMKAQALRD KK +EINPD+ I+E LR++AE D
Sbjct: 304 TSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEAD 363
Query: 629 KNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRMLKLGLSIEEDETAGDDA----- 683
KNDKSVKD +SGFSL+DP T A RI+RM+KLGL I+ED+ DD
Sbjct: 364 KNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVT 423
Query: 684 -EMPPLEDEGNEESKMEEVD 702
EMPPLE + ++ S+MEEVD
Sbjct: 424 EEMPPLEGD-DDTSRMEEVD 442
>pdb|3HJC|A Chain A, Crystal Structure Of The Carboxy-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312
Length = 444
Score = 535 bits (1379), Expect = e-152, Method: Compositional matrix adjust.
Identities = 251/407 (61%), Positives = 317/407 (77%)
Query: 268 QKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLF 327
KP+W R P++VTKEEYA+FYK+++NDWED A KHFSVEGQLEF++I+FVP+RAPFD+F
Sbjct: 19 HKPLWTRDPKDVTKEEYAAFYKAISNDWEDPAATKHFSVEGQLEFRSIMFVPKRAPFDMF 78
Query: 328 DTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVI 387
+ KK NNIKLYVRRVFIMDNCE+L P++LGFVKGVVDS+DLPLNISRE LQQNKILKVI
Sbjct: 79 EPNKKRNNIKLYVRRVFIMDNCEDLCPDWLGFVKGVVDSEDLPLNISRENLQQNKILKVI 138
Query: 388 RKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGD 447
RKN+VKKC+EMF+E+AENKEDY +FY+ F KNIKLGIHED+ NR KL +LLRF+ST+SG+
Sbjct: 139 RKNIVKKCLEMFDEVAENKEDYKQFYEQFGKNIKLGIHEDTANRKKLMELLRFYSTESGE 198
Query: 448 EMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQ 507
EMT+LKDYVTRMK GQK IYYITG+S+K +E SPF+E+ +++G EVLFM + IDEY + Q
Sbjct: 199 EMTTLKDYVTRMKAGQKSIYYITGDSKKKLETSPFIEQARRRGLEVLFMTEPIDEYVMQQ 258
Query: 508 LKEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKEILGDNVEKVVVSDRI 567
+K+++ KK T + E LCKT+KE+LGD VEKV+VS+R+
Sbjct: 259 VKDFEDKKFACLTKEGVHFEESEEEKQQREEEKAACEKLCKTMKEVLGDKVEKVIVSERL 318
Query: 568 VDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXXKKTMEINPDNGIMEELRKRAEV 627
SPC LVT E+GWSA+ME+IM+ QALRD KKTME+NP + I++ELR+R
Sbjct: 319 STSPCILVTSEFGWSAHMEQIMRNQALRDSSMAQYMMSKKTMELNPRHPIIKELRRRVGA 378
Query: 628 DKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRMLKLGLSIE 674
D+NDK+VKD TSGF L+DP +A RI+RM+KLGLS++
Sbjct: 379 DENDKAVKDLVFLLFDTSLLTSGFQLEDPTGYAERINRMIKLGLSLD 425
>pdb|2CG9|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CG9|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 677
Score = 520 bits (1338), Expect = e-147, Method: Compositional matrix adjust.
Identities = 257/414 (62%), Positives = 313/414 (75%), Gaps = 2/414 (0%)
Query: 260 HEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVP 319
E + +NK KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P
Sbjct: 265 QEIEELNKTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIP 324
Query: 320 RRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQ 379
+RAPFDLF+++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQ
Sbjct: 325 KRAPFDLFESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQ 384
Query: 380 QNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLR 439
QNKI+KVIRKN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR
Sbjct: 385 QNKIMKVIRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLR 444
Query: 440 FHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDA 499
++STKS DE+TSL DYVTRM E QK+IYYITGES KAVE SPFL+ LK K +EVLF+ D
Sbjct: 445 YNSTKSVDELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDP 504
Query: 500 IDEYAVGQLKEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKEILGDNVE 559
IDEYA QLKE++GK LV T +E L K +KEILGD VE
Sbjct: 505 IDEYAFTQLKEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVE 563
Query: 560 KVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXXKKTMEINPDNGIME 619
KVVVS +++D+P + TG++GWSANMERIMKAQALRD KKT EI+P + I++
Sbjct: 564 KVVVSYKLLDAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIK 623
Query: 620 ELRKRA-EVDKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRMLKLGLS 672
EL+KR E DK+VKD TSGFSLD+P +FA+RI+R++ LGL+
Sbjct: 624 ELKKRVDEGGAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 677
Score = 308 bits (788), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2CGE|A Chain A, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|B Chain B, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
pdb|2CGE|D Chain D, Crystal Structure Of An Hsp90-Sba1 Closed Chaperone
Complex
Length = 405
Score = 514 bits (1324), Expect = e-146, Method: Compositional matrix adjust.
Identities = 254/405 (62%), Positives = 308/405 (76%), Gaps = 2/405 (0%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P+RAPFDLF+
Sbjct: 2 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 61
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQQNKI+KVIR
Sbjct: 62 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 121
Query: 389 KNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDE 448
KN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR++STKS DE
Sbjct: 122 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 181
Query: 449 MTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQL 508
+TSL DYVTRM E QK+IYYITGES KAVE SPFL+ LK K +EVLF+ D IDEYA QL
Sbjct: 182 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 241
Query: 509 KEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKEILGDNVEKVVVSDRIV 568
KE++GK LV T +E L K +KEILGD VEKVVVS +++
Sbjct: 242 KEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKEILGDQVEKVVVSYKLL 300
Query: 569 DSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXXKKTMEINPDNGIMEELRKRA-EV 627
D+P + TG++GWSANMERIMKAQALRD KKT EI+P + I++EL+KR E
Sbjct: 301 DAPAAIRTGQFGWSANMERIMKAQALRDSSMSSYMSSKKTFEISPKSPIIKELKKRVDEG 360
Query: 628 DKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRMLKLGLS 672
DK+VKD TSGFSLD+P +FA+RI+R++ LGL+
Sbjct: 361 GAQDKTVKDLTKLLYETALLTSGFSLDEPTSFASRINRLISLGLN 405
>pdb|2O1W|A Chain A, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|B Chain B, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|C Chain C, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|D Chain D, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
pdb|2O1W|E Chain E, Structure Of N-Terminal Plus Middle Domains (N+m) Of Grp94
Length = 506
Score = 503 bits (1296), Expect = e-142, Method: Compositional matrix adjust.
Identities = 266/519 (51%), Positives = 348/519 (67%), Gaps = 45/519 (8%)
Query: 5 HMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDA 64
HM +E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L
Sbjct: 20 HM--SEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAG 77
Query: 65 QPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADV 120
EL ++I DK L + D+GVGMT+ +LV NLGTIA+SGT EF+ EA + G
Sbjct: 78 NEELTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQST 137
Query: 121 S-MIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKI 179
S +IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT I
Sbjct: 138 SELIGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDSN-EFSVIADPRGNTLGRGTTI 196
Query: 180 TLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWXXXXXXXXXXXXXXXXXXXXXXXXX 239
TL LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 197 TLVLKEEASDYLELDTIKNLVKKYSQFINFPIYVWSSKTGGGGKTVW------------- 243
Query: 240 XXXXXXXXXXXXXXXXXXXXHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHL 299
+W+L+N KPIW R +EV +EY +FYKS + + +D +
Sbjct: 244 ---------------------DWELMNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPM 282
Query: 300 AVKHFSVEGQLEFKAILFVPRRAPFDLFD--TRKKLNNIKLYVRRVFIMDNCEELIPEYL 357
A HF+ EG++ FK+ILFVP AP LFD KK + IKLYVRRVFI D+ +++P+YL
Sbjct: 283 AYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYL 342
Query: 358 GFVKGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFS 417
FVKGVVDSDDLPLN+SRETLQQ+K+LKVIRK LV+K ++M +IA+ K + F+ F
Sbjct: 343 NFVKGVVDSDDLPLNVSRETLQQHKLLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFG 401
Query: 418 KNIKLGIHEDSQNRAKLADLLRFHSTKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477
NIKLG+ ED NR +LA LLRF S+ ++TSL YV RMKE Q IY++ G SRK
Sbjct: 402 TNIKLGVIEDHSNRTRLAKLLRFQSSHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEA 461
Query: 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKL 516
E+SPF+ERL KKGYEV+++ + +DEY + L E+DGK+
Sbjct: 462 ESSPFVERLLKKGYEVIYLTEPVDEYCIQALPEFDGKRF 500
>pdb|2IOP|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|C Chain C, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOP|D Chain D, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90, Bound To Adp
pdb|2IOQ|A Chain A, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
pdb|2IOQ|B Chain B, Crystal Structure Of Full-Length Htpg, The Escherichia
Coli Hsp90
Length = 624
Score = 424 bits (1091), Expect = e-119, Method: Compositional matrix adjust.
Identities = 245/671 (36%), Positives = 377/671 (56%), Gaps = 58/671 (8%)
Query: 6 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQ 65
M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF L++ +
Sbjct: 1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD 60
Query: 66 PELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMI 123
EL +R+ DK +TL+I D+GVGMT+ +++++LGTIA+SGTK F+E+L + D +I
Sbjct: 61 GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI 120
Query: 124 GQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKIT 180
GQFGVGFYSA++VA+KV V T+ + WES G +TV D++ E RGT+IT
Sbjct: 121 GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKE--DRGTEIT 177
Query: 181 LFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWXXXXXXXXXXXXXXXXXXXXXXXXXX 240
L L+E + E+L++ R++ ++ K+S+ I+ P+ +
Sbjct: 178 LHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--------------------------- 210
Query: 241 XXXXXXXXXXXXXXXXXXXHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLA 300
W+ INK + +W R E+T EEY FYK + +D+ D L
Sbjct: 211 --------EKREEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLT 262
Query: 301 VKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFV 360
H VEG+ E+ ++L++P +AP+D+++ R + +KLYV+RVFIMD+ E+ +P YL FV
Sbjct: 263 WSHNRVEGKQEYTSLLYIPSQAPWDMWN-RDHKHGLKLYVQRVFIMDDAEQFMPNYLRFV 321
Query: 361 KGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIA-ENKEDYAKFYDAFSKN 419
+G++DS DLPLN+SRE LQ + + + +R L K+ ++M ++A ++ E Y F+ F
Sbjct: 322 RGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLV 381
Query: 420 IKLGIHEDSQNRAKLADLLRFHSTK--SGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477
+K G ED N+ +A LLRF ST S + SL+DYV+RMKEGQ+ IYYIT +S A
Sbjct: 382 LKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAA 441
Query: 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATXX-XXXXXXXXXXXXXX 536
++SP LE L+KKG EVL + D IDE+ + L E+DGK S +
Sbjct: 442 KSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESA 501
Query: 537 XXXXXSFENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRD 596
+ +K +LG+ V+ V ++ R+ D+P + T S M ++ A +
Sbjct: 502 KEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQK- 560
Query: 597 XXXXXXXXXKKTMEINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXXTSGFSLDDP 656
K E+NPD+ ++ KRA +++ + +L+DP
Sbjct: 561 -----VPEVKYIFELNPDHVLV----KRAADTEDEAKFSEWVELLLDQALLAERGTLEDP 611
Query: 657 NTFAARIHRML 667
N F R++++L
Sbjct: 612 NLFIRRMNQLL 622
>pdb|1Y4S|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4S|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|A Chain A, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
pdb|1Y4U|B Chain B, Conformation Rearrangement Of Heat Shock Protein 90 Upon
Adp Binding
Length = 559
Score = 415 bits (1066), Expect = e-116, Method: Compositional matrix adjust.
Identities = 230/595 (38%), Positives = 347/595 (58%), Gaps = 48/595 (8%)
Query: 6 MGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQ 65
M ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF L++ +
Sbjct: 1 MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEGD 60
Query: 66 PELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSMI 123
EL +R+ DK +TL+I D+GVGMT+ +++++LGTIA+SGTK F+E+L + D +I
Sbjct: 61 GELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQLI 120
Query: 124 GQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKIT 180
GQFGVGFYSA++VA+KV V T+ + WES G +TV D++ E RGT+IT
Sbjct: 121 GQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKED--RGTEIT 177
Query: 181 LFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLWXXXXXXXXXXXXXXXXXXXXXXXXXX 240
L L+E + E+L++ R++ ++ K+S+ I+ P+ +
Sbjct: 178 LHLREGEDEFLDDWRVRSIISKYSDHIALPVEI--------------------------- 210
Query: 241 XXXXXXXXXXXXXXXXXXXHEWQLINKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLA 300
W+ INK + +W R E+T EEY FYK + +D+ D L
Sbjct: 211 --------EKREEKDGETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLT 262
Query: 301 VKHFSVEGQLEFKAILFVPRRAPFDLFDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFV 360
H VEG+ E+ ++L++P +AP+D+++ R + +KLYV+RVFIMD+ E+ +P YL FV
Sbjct: 263 WSHNRVEGKQEYTSLLYIPSQAPWDMWN-RDHKHGLKLYVQRVFIMDDAEQFMPNYLRFV 321
Query: 361 KGVVDSDDLPLNISRETLQQNKILKVIRKNLVKKCIEMFNEIA-ENKEDYAKFYDAFSKN 419
+G++DS DLPLN+SRE LQ + + + +R L K+ ++M ++A ++ E Y F+ F
Sbjct: 322 RGLIDSSDLPLNVSREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLV 381
Query: 420 IKLGIHEDSQNRAKLADLLRFHSTK--SGDEMTSLKDYVTRMKEGQKDIYYITGESRKAV 477
+K G ED N+ +A LLRF ST S + SL+DYV+RMKEGQ+ IYYIT +S A
Sbjct: 382 LKEGPAEDFANQEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAA 441
Query: 478 ENSPFLERLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSATXX-XXXXXXXXXXXXXX 536
++SP LE L+KKG EVL + D IDE+ + L E+DGK S +
Sbjct: 442 KSSPHLELLRKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESA 501
Query: 537 XXXXXSFENLCKTIKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKA 591
+ +K +LG+ V+ V ++ R+ D+P + T S M ++ A
Sbjct: 502 KEAEKALTPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAA 556
>pdb|3PRY|A Chain A, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|B Chain B, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
pdb|3PRY|C Chain C, Crystal Structure Of The Middle Domain Of Human Hsp90-Beta
Refined At 2.3 A Resolution
Length = 268
Score = 399 bits (1025), Expect = e-111, Method: Compositional matrix adjust.
Identities = 186/254 (73%), Positives = 230/254 (90%)
Query: 267 KQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDL 326
K KPIW R P+++T+EEY FYKSLTNDWEDHLAVKHFSVEGQLEF+A+LF+PRRAPFDL
Sbjct: 2 KTKPIWTRNPDDITQEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFIPRRAPFDL 61
Query: 327 FDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKV 386
F+ +KK NNIKLYVRRVFIMD+C+ELIPEYL F++GVVDS+DLPLNISRE LQQ+KILKV
Sbjct: 62 FENKKKKNNIKLYVRRVFIMDSCDELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKV 121
Query: 387 IRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSG 446
IRKN+VKKC+E+F+E+AE+KE+Y KFY+AFSKN+KLGIHEDS NR +L++LLR+H+++SG
Sbjct: 122 IRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSG 181
Query: 447 DEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVG 506
DEMTSL +YV+RMKE QK IYYITGES++ V NS F+ER++K+G+EV++M + IDEY V
Sbjct: 182 DEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQ 241
Query: 507 QLKEYDGKKLVSAT 520
QLKE+DGK LVS T
Sbjct: 242 QLKEFDGKSLVSVT 255
>pdb|1HK7|A Chain A, Middle Domain Of Hsp90
pdb|1HK7|B Chain B, Middle Domain Of Hsp90
Length = 288
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 193/288 (67%), Positives = 227/288 (78%), Gaps = 1/288 (0%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P+RAPFDLF+
Sbjct: 2 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 61
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQQNKI+KVIR
Sbjct: 62 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 121
Query: 389 KNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDE 448
KN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR++STKS DE
Sbjct: 122 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 181
Query: 449 MTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQL 508
+TSL DYVTRM E QK+IYYITGES KAVE SPFL+ LK K +EVLF+ D IDEYA QL
Sbjct: 182 LTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 241
Query: 509 KEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKEILGD 556
KE++GK LV T +E L K +KEILGD
Sbjct: 242 KEFEGKTLVDIT-KDFELEETDEEKAEREKEIKEYEPLTKALKEILGD 288
>pdb|2XCM|A Chain A, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
pdb|2XCM|B Chain B, Complex Of Hsp90 N-Terminal, Sgt1 Cs And Rar1 Chord2
Domain
Length = 214
Score = 392 bits (1008), Expect = e-109, Method: Compositional matrix adjust.
Identities = 187/207 (90%), Positives = 197/207 (95%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE LTDKSKLDAQPE
Sbjct: 7 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPE 66
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
LFI I+PDKA TL+I+DSG+GMTK+DLVNNLGTIARSGTKEFMEAL AGADVSMIGQFG
Sbjct: 67 LFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFG 126
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAE+V+VTTKHNDDEQYVWESQAGGSFTVTRD SGE LGRGTK+ L+LK+DQ
Sbjct: 127 VGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQ 186
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIKDLVKKHSEFISYPI LW
Sbjct: 187 MEYLEERRIKDLVKKHSEFISYPISLW 213
>pdb|2JKI|A Chain A, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|B Chain B, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
pdb|2JKI|C Chain C, Complex Of Hsp90 N-terminal And Sgt1 Cs Domain
Length = 223
Score = 392 bits (1007), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/207 (89%), Positives = 197/207 (95%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFE LTDKSKLDAQPE
Sbjct: 10 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFESLTDKSKLDAQPE 69
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
LFI I+PDKA TL+I+DSG+GMTK+DLVNNLGTIARSGTKEFMEAL AGADVSMIGQFG
Sbjct: 70 LFIHIIPDKATSTLTIVDSGIGMTKSDLVNNLGTIARSGTKEFMEALAAGADVSMIGQFG 129
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAE+V+VTTKHNDDEQYVWESQAGGSFTVTRD SGE LGRGTK+ L+LK+DQ
Sbjct: 130 VGFYSAYLVAERVVVTTKHNDDEQYVWESQAGGSFTVTRDTSGEQLGRGTKMVLYLKDDQ 189
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIKDLVK+HSEFISYPI LW
Sbjct: 190 MEYLEERRIKDLVKRHSEFISYPISLW 216
>pdb|1USV|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|C Chain C, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|E Chain E, The Structure Of The Complex Between Aha1 And Hsp90
pdb|1USV|G Chain G, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 185/254 (72%), Positives = 217/254 (85%)
Query: 267 KQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDL 326
K KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P+RAPFDL
Sbjct: 2 KTKPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDL 61
Query: 327 FDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKV 386
F+++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQQNKI+KV
Sbjct: 62 FESKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKV 121
Query: 387 IRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSG 446
IRKN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR++STKS
Sbjct: 122 IRKNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSV 181
Query: 447 DEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVG 506
DE+TSL DYVTRM E QK+IYYITGES KAVE SPFL+ LK K +EVLF+ D IDEYA
Sbjct: 182 DELTSLTDYVTRMPEHQKNIYYITGESLKAVEKSPFLDALKAKNFEVLFLTDPIDEYAFT 241
Query: 507 QLKEYDGKKLVSAT 520
QLKE++GK LV T
Sbjct: 242 QLKEFEGKTLVDIT 255
>pdb|1USU|A Chain A, The Structure Of The Complex Between Aha1 And Hsp90
Length = 260
Score = 387 bits (995), Expect = e-108, Method: Compositional matrix adjust.
Identities = 183/252 (72%), Positives = 216/252 (85%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
KP+W R P ++T+EEY +FYKS++NDWED L VKHFSVEGQLEF+AILF+P+RAPFDLF+
Sbjct: 4 KPLWTRNPSDITQEEYNAFYKSISNDWEDPLYVKHFSVEGQLEFRAILFIPKRAPFDLFE 63
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
++KK NNIKLYVRRVFI D E+LIPE+L FVKGVVDS+DLPLN+SRE LQQNKI+KVIR
Sbjct: 64 SKKKKNNIKLYVRRVFITDEAEDLIPEWLSFVKGVVDSEDLPLNLSREMLQQNKIMKVIR 123
Query: 389 KNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSGDE 448
KN+VKK IE FNEIAE+ E + KFY AFSKNIKLG+HED+QNRA LA LLR++STKS DE
Sbjct: 124 KNIVKKLIEAFNEIAEDSEQFEKFYSAFSKNIKLGVHEDTQNRAALAKLLRYNSTKSVDE 183
Query: 449 MTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAVGQL 508
+TSL DYVTRM E QK+IYYITGES K+VE SPFL+ LK K +EVLF+ D IDEYA QL
Sbjct: 184 LTSLTDYVTRMPEHQKNIYYITGESLKSVEKSPFLDALKAKNFEVLFLTDPIDEYAFTQL 243
Query: 509 KEYDGKKLVSAT 520
KE++GK LV T
Sbjct: 244 KEFEGKTLVDIT 255
>pdb|2O1T|A Chain A, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|B Chain B, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|C Chain C, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|D Chain D, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|E Chain E, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|F Chain F, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|G Chain G, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|H Chain H, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|I Chain I, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
pdb|2O1T|J Chain J, Structure Of Middle Plus C-Terminal Domains (M+c) Of Grp94
Length = 450
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 196/418 (46%), Positives = 265/418 (63%), Gaps = 7/418 (1%)
Query: 265 INKQKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPF 324
+N KPIW R +EV +EY +FYKS + + +D +A HF+ EG++ FK+ILFVP AP
Sbjct: 21 MNDIKPIWQRPSKEVEDDEYKAFYKSFSKESDDPMAYIHFTAEGEVTFKSILFVPTSAPR 80
Query: 325 DLFDT--RKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNK 382
LFD KK + IKLYVRRVFI D+ +++P+YL FVKGVVDSDDLPLN+SRETLQQ+K
Sbjct: 81 GLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQHK 140
Query: 383 ILKVIRKNLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHS 442
+LKVIRK LV+K ++M +IA+ K + F+ F NIKLG+ ED NR +LA LLRF S
Sbjct: 141 LLKVIRKKLVRKTLDMIKKIADEKYN-DTFWKEFGTNIKLGVIEDHSNRTRLAKLLRFQS 199
Query: 443 TKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDE 502
+ ++TSL YV RMKE Q IY++ G SRK E+SPF+ERL KKGYEV+++ + +DE
Sbjct: 200 SHHPSDITSLDQYVERMKEKQDKIYFMAGSSRKEAESSPFVERLLKKGYEVIYLTEPVDE 259
Query: 503 YAVGQLKEYDGKKLVSATXXXXXXXXXXXXXXXXXXXXXSFENLCKTIKE-ILGDNVEKV 561
Y + L E+DGK+ + FE L +K+ L D +EK
Sbjct: 260 YCIQALPEFDGKRFQNVAKEGVKFDESEKTKESREAIEKEFEPLLNWMKDKALKDKIEKA 319
Query: 562 VVSDRIVDSPCCLVTGEYGWSANMERIMKAQAL---RDXXXXXXXXXKKTMEINPDNGIM 618
VVS R+ +SPC LV +YGWS NMERIMKAQA +D KKT EINP + ++
Sbjct: 320 VVSQRLTESPCALVASQYGWSGNMERIMKAQAYQTGKDISTNYYASQKKTFEINPRHPLI 379
Query: 619 EELRKRAEVDKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRMLKLGLSIEED 676
+++ +R + D++DK+V D SG+ L D + RI RML+L L+I+ D
Sbjct: 380 KDMLRRVKEDEDDKTVSDLAVVLFETATLRSGYLLPDTKAYGDRIERMLRLSLNIDPD 437
>pdb|2YE2|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE3|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE4|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE5|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE6|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE9|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEA|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEB|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEC|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YED|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEF|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEG|B Chain B, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEH|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 344 bits (882), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/219 (76%), Positives = 189/219 (86%), Gaps = 7/219 (3%)
Query: 2 ADVHMG------ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEG 55
AD HM E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 20 ADKHMDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 79
Query: 56 LTDKSKLDAQPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQ 115
LTD SKLD+ EL I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQ
Sbjct: 80 LTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQ 139
Query: 116 AGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGR 175
AGAD+SMIGQFGVGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GR
Sbjct: 140 AGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 198
Query: 176 GTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
GTK+ L LKEDQ EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 199 GTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLF 237
>pdb|1UY6|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UY7|A Chain A, Human Hsp90-alpha With
9-butyl-8-(4-methoxy-benzyl)-9h-purin-6-ylamine
pdb|1UY8|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(3-Trimethoxy-Benzyl)-9h-Purin-6ylamine
pdb|1UY9|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,
5-Ylmethyl-9-Butyl-9h-Purin-6-Ylamine
pdb|1UYC|A Chain A, Human Hsp90-Alpha With
9-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYD|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine
pdb|1UYE|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYF|A Chain A, Human Hsp90-Alpha With
8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)
-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
pdb|1UYG|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYH|A Chain A, Human Hsp90-Alpha With 9-Butyl-8-
(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYK|A Chain A, Human Hsp90-Alpha With
8-Benzo[1,3]dioxol-,5-Ylmethyl-9-But
Yl-2-Fluoro-9h-Purin-6-Ylamine
pdb|1UYL|A Chain A, Structure-Activity Relationships In Purine-Based Inhibitor
Binding To Hsp90 Isoforms
pdb|2UWD|A Chain A, Inhibition Of The Hsp90 Molecular Chaperone In Vitro And
In Vivo By Novel, Synthetic, Potent Resorcinylic
Pyrazole, Isoxazole Amide Analogs
pdb|2VCI|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2VCJ|A Chain A, 4,5 Diaryl Isoxazole Hsp90 Chaperone Inhibitors: Potential
Therapeutic Agents For The Treatment Of Cancer
pdb|2WI1|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI2|B Chain B, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI3|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI4|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI5|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI6|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|2WI7|A Chain A, Orally Active 2-Amino Thienopyrimidine Inhibitors Of The
Hsp90 Chaperone
pdb|4FCP|A Chain A, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCP|B Chain B, Targetting Conserved Water Molecules: Design Of
4-Aryl-5-Cyanopyrrolo [2,3-D] Pyrimidine Hsp90
Inhibitors Using Fragment-Based Screening And
Structure-Based Optimization
pdb|4FCQ|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
pdb|4FCR|A Chain A, Targeting Conserved Water Molecules: Design Of 4-Aryl-5-
Cyanopyrrolo[2,3-D]pyrimidine Hsp90 Inhibitors Using
Fragment-Based Screening And Structure-Based
Optimization
Length = 236
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 75
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 76 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 135
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 194
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 195 TEYLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|3QDD|A Chain A, Hsp90a N-Terminal Domain In Complex With Biib021
Length = 237
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 17 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 76
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 77 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 136
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 137 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 195
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 196 TEYLEERRIKEIVKKHSQFIGYPITLF 222
>pdb|2YI0|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI5|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI6|A Chain A, Structural Characterization Of 5-Aryl-4-(5-Substituted-2-
4-Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors.
pdb|2YI7|A Chain A, Structural Characterization Of
5-Aryl-4-(5-Substituted-2-4-
Dihydroxyphenyl)-1,2,3-Thiadiazole Hsp90 Inhibitors
Length = 229
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 75
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 76 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 135
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 194
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 195 TEYLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|2BSM|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|A Chain A, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BT0|B Chain B, Novel, Potent Small Molecule Inhibitors Of The Molecular
Chaperone Hsp90 Discovered Through Structure-Based
Design
pdb|2BYH|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BYI|A Chain A, 3-(5-Chloro-2,4-Dihydroxyphenyl)-Pyrazole-4-Carboxamides
As Inhibitors Of The Hsp90 Molecular Chaperone
pdb|2BZ5|A Chain A, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
pdb|2BZ5|B Chain B, Structure-Based Discovery Of A New Class Of Hsp90
Inhibitors
Length = 235
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 15 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 74
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 75 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 134
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 135 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 193
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 194 TEYLEERRIKEIVKKHSQFIGYPITLF 220
>pdb|3HHU|A Chain A, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
pdb|3HHU|B Chain B, Human Heat-Shock Protein 90 (Hsp90) In Complex With {4-[3-
(2,4-Dihydroxy-5-Isopropyl-Phenyl)-5-Thioxo-
1,5-Dihydro- [1,2,4]triazol-4-Yl]-Benzyl}-Carbamic Acid
Ethyl Ester {zk 2819}
Length = 224
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 75
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 76 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 135
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 194
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 195 TEYLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|2FWY|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-H64
pdb|2FWZ|A Chain A, Structure Of Human Hsp90-alpha Bound To The Potent Water
Soluble Inhibitor Pu-h71
pdb|2H55|A Chain A, Structure Of Human Hsp90-Alpha Bound To The Potent Water
Soluble Inhibitor Pu-Dz8
pdb|3O0I|A Chain A, Structure Of The Human Hsp90-Alpha N-Domain Bound To The
Hsp90 Inhibitor Pu-H54
Length = 256
Score = 343 bits (880), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 36 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 95
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 96 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 155
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 156 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 214
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 215 TEYLEERRIKEIVKKHSQFIGYPITLF 241
>pdb|2YE7|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YE8|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEI|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
pdb|2YEJ|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/219 (75%), Positives = 189/219 (86%), Gaps = 7/219 (3%)
Query: 2 ADVHMGE------TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEG 55
AD HM + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 20 ADKHMDQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 79
Query: 56 LTDKSKLDAQPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQ 115
LTD SKLD+ EL I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQ
Sbjct: 80 LTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQ 139
Query: 116 AGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGR 175
AGAD+SMIGQFGVGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GR
Sbjct: 140 AGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 198
Query: 176 GTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
GTK+ L LKEDQ EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 199 GTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLF 237
>pdb|3BM9|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3BMY|A Chain A, Discovery Of Benzisoxazoles As Potent Inhibitors Of
Chaperone Hsp90
pdb|3QTF|A Chain A, Design And Sar Of Macrocyclic Hsp90 Inhibitors With
Increased Metabolic Stability And Potent
Cell-Proliferation Activity
pdb|3R91|A Chain A, Macrocyclic Lactams As Potent Hsp90 Inhibitors With
Excellent Tumor Exposure And Extended Biomarker
Activity.
pdb|3R92|A Chain A, Discovery Of A Macrocyclic O-Aminobenzamide Hsp90
Inhibitor With Heterocyclic Tether That Shows Extended
Biomarker Activity And In Vivo Efficacy In A Mouse
Xenograft Model.
pdb|3RKZ|A Chain A, Discovery Of A Stable Macrocyclic O-Aminobenzamide Hsp90
Inhibitor Capable Of Significantly Decreasing Tumor
Volume In A Mouse Xenograft Model
Length = 226
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 6 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 65
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 66 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 125
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 126 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 184
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 185 TEYLEERRIKEIVKKHSQFIGYPITLF 211
>pdb|3INW|A Chain A, Hsp90 N-Terminal Domain With Pochoxime A
pdb|3INX|A Chain A, Hsp90 N-Terminal Domain With Pochoxime B
Length = 228
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 8 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 68 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 127
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 186
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 187 TEYLEERRIKEIVKKHSQFIGYPITLF 213
>pdb|3D0B|A Chain A, Crystal Structure Of Benzamide
Tetrahydro-4h-Carbazol-4-One Bound To Hsp90
pdb|3MNR|P Chain P, Crystal Structure Of Benzamide Snx-1321 Bound To Hsp90
Length = 232
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 75
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 76 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 135
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 194
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 195 TEYLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|2CCS|A Chain A, Human Hsp90 With
4-Chloro-6-(4-Piperazin-1-Yl-1h-Pyrazol-3-
Yl)-Benzene-1,2-Diol
pdb|2CCT|A Chain A, Human Hsp90 With 5-(5-Chloro-2,4-Dihydroxy-Phenyl)-4-
Piperazin-1-Yl-2h-Pyrazole-3-Carboxylic Acid Ethylamide
pdb|2CCU|A Chain A, Human Hsp90 With 4-Chloro-6-(4-(4-(4-Methanesulphonyl-
Benzyl)-Pierazin-1-Yl)-1h-Pyrazol-3-Yl)-Benzene-1,3-Diol
Length = 236
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 16 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKE 75
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 76 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 135
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 136 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 194
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 195 TEYLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|3B24|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B24|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An
Aminotriazine Fragment Molecule
pdb|3B25|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch4675194
pdb|3B26|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B26|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro1127850
pdb|3B27|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ro4919127
pdb|3B28|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3B28|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
Ch5015765
pdb|3VHA|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHC|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor
pdb|3VHD|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
pdb|3VHD|B Chain B, Hsp90 Alpha N-Terminal Domain In Complex With A
Macrocyclic Inhibitor, Ch5164840
Length = 229
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 9 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 68
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 69 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 128
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 187
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 188 TEYLEERRIKEIVKKHSQFIGYPITLF 214
>pdb|4EGH|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
(4-Hydroxyphenyl)morpholin- 4-Yl Methanone
pdb|4EGI|A Chain A, Hsp90-Alpha Atpase Domain In Complex With
2-Amino-4-Ethylthio-6- Methyl-1,3,5-Triazine
pdb|4EGK|A Chain A, Human Hsp90-Alpha Atpase Domain Bound To Radicicol
Length = 232
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 12 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 71
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 72 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 131
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 132 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 190
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 191 TEYLEERRIKEIVKKHSQFIGYPITLF 217
>pdb|3R4M|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3T0H|A Chain A, Structure Insights Into Mechanisms Of Atp Hydrolysis And
The Activation Of Human Hsp90
pdb|3T0Z|A Chain A, Hsp90 N-Terminal Domain Bound To Atp
pdb|3T10|A Chain A, Hsp90 N-Terminal Domain Bound To Acp
pdb|3T1K|A Chain A, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T1K|B Chain B, Hsp90 N-Terminal Domain Bound To Anp
pdb|3T2S|A Chain A, Hsp90 N-Terminal Domain Bound To Ags
pdb|3T2S|B Chain B, Hsp90 N-Terminal Domain Bound To Ags
Length = 228
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 8 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 68 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 127
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 186
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 187 TEYLEERRIKEIVKKHSQFIGYPITLF 213
>pdb|4EEH|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-(4- Hydroxy-Phenyl)-1h-Indazol-6-Ol
pdb|4EFT|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
3-
Cyclohexyl-2-(6-Hydroxy-1h-Indazol-3-Yl)-Propionitrile
pdb|4EFU|A Chain A, Hsp90 Alpha N-Terminal Domain In Complex With An Inhibitor
6-Hydroxy- 3-(3-Methyl-Benzyl)-1h-Indazole-5-Carboxylic
Acid Benzyl-Methyl-Amide
Length = 229
Score = 343 bits (879), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 9 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 68
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 69 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 128
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 187
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 188 TEYLEERRIKEIVKKHSQFIGYPITLF 214
>pdb|3K98|A Chain A, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K98|B Chain B, Hsp90 N-Terminal Domain In Complex With
(1r)-2-(5-Chloro-2,
4-Dihydroxybenzoyl)-N-Ethylisoindoline-1-Carboxamide
pdb|3K99|A Chain A, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|B Chain B, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|C Chain C, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
pdb|3K99|D Chain D, Hsp90 N-Terminal Domain In Complex With 4-(1,3-Dihydro-2h-
Isoindol-2-Ylcarbonyl)benzene-1,3-Diol
Length = 232
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 9 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 68
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 69 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 128
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 187
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 188 TEYLEERRIKEIVKKHSQFIGYPITLF 214
>pdb|3EKO|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKO|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|A Chain A, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3EKR|B Chain B, Dihydroxylphenyl Amides As Inhibitors Of The Hsp90
Molecular Chaperone
pdb|3HEK|A Chain A, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3HEK|B Chain B, Hsp90 N-Terminal Domain In Complex With 1-{4-[(2r)-1-(5-
Chloro-2,4-Dihydroxybenzoyl)pyrrolidin-2-Yl]benzyl}-3,3-
Difluoropyrrolidinium
pdb|3R4N|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4N|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4O|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|A Chain A, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3R4P|B Chain B, Optimization Of Potent, Selective, And Orally Bioavailable
Pyrrolodinopyrimidine-Containing Inhibitors Of Heat
Shock Protein 90. Identification Of Development
Candidate 2-Amino-4-{4-Chloro-2-[2-(4-
Fluoro-1h-Pyrazol-1-Yl)ethoxy]-6-Methylphenyl}-N-(2,2-
Difluoropropyl)-5,7-Dihydro-6h-Pyrrolo[3,
4-D]pyrimidine-6-Carboxamide
pdb|3RLP|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLP|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,
4-Dichloro-5-Methoxyphenyl)-6-Methylpyrimidin-2-Amine
pdb|3RLQ|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLQ|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2-Methyl-7h-Pyrrolo[2,
3- D]pyrimidine-5- Carbonitrile
pdb|3RLR|A Chain A, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
pdb|3RLR|B Chain B, Co-Crystal Structure Of The Hsp90 Atp Binding Domain In
Complex With
4-(2,4-Dichloro-5-Methoxyphenyl)-2,
6-Dimethyl-7h-Pyrrolo[2,3- D]pyrimidine-5-Carbonitrile
Length = 226
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 9 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 68
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 69 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 128
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 129 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 187
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 188 TEYLEERRIKEIVKKHSQFIGYPITLF 214
>pdb|3FT5|A Chain A, Structure Of Hsp90 Bound With A Novel Fragment
pdb|3FT8|A Chain A, Structure Of Hsp90 Bound With A Noval Fragment.
pdb|3HYY|A Chain A, Crystal Structure Of Hsp90 With Fragment 37-D04
pdb|3HYZ|A Chain A, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HYZ|B Chain B, Crystal Structure Of Hsp90 With Fragment 42-C03
pdb|3HZ1|A Chain A, Crystal Structure Of Hsp90 With Fragments 37-D04 And
42-C03
pdb|3HZ5|A Chain A, Crystal Structure Of Hsp90 With Fragment Z064
pdb|2XAB|A Chain A, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XAB|B Chain B, Structure Of Hsp90 With An Inhibitor Bound
pdb|2XJX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDK|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDL|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDS|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XDX|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHR|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHT|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XK2|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 29 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 88
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 89 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 148
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 149 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 207
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 208 TEYLEERRIKEIVKKHSQFIGYPITLF 234
>pdb|4AWO|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWO|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWP|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|A Chain A, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
pdb|4AWQ|B Chain B, Complex Of Hsp90 Atpase Domain With Tropane Derived
Inhibitors
Length = 230
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 10 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 69
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 70 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 129
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 130 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 188
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 189 TEYLEERRIKEIVKKHSQFIGYPITLF 215
>pdb|2YJW|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YJX|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK2|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKB|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKC|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKE|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKI|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YKJ|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
pdb|2YK9|A Chain A, Tricyclic Series Of Hsp90 Inhibitors
Length = 209
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/208 (78%), Positives = 185/208 (88%), Gaps = 1/208 (0%)
Query: 7 GETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQP 66
G ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+
Sbjct: 1 GHMETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGK 60
Query: 67 ELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQF 126
EL I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQF
Sbjct: 61 ELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQF 120
Query: 127 GVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKED 186
GVGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKED
Sbjct: 121 GVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKED 179
Query: 187 QCEYLEERRIKDLVKKHSEFISYPIYLW 214
Q EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 180 QTEYLEERRIKEIVKKHSQFIGYPITLF 207
>pdb|3K97|A Chain A, Hsp90 N-Terminal Domain In Complex With
4-Chloro-6-{[(2r)-2-
(2-Methylphenyl)pyrrolidin-1-Yl]carbonyl}benzene-1,
3-Diol
Length = 251
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 31 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 90
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 91 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 150
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 151 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 209
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 210 TEYLEERRIKEIVKKHSQFIGYPITLF 236
>pdb|3TUH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
pdb|3TUH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90 In
The Presence Of An The Inhibitor Ganetespib
Length = 209
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 1 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 60
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 61 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 120
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 121 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 179
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 180 TEYLEERRIKEIVKKHSQFIGYPITLF 206
>pdb|2JJC|A Chain A, Hsp90 Alpha Atpase Domain With Bound Small Molecule
Fragment
Length = 218
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 11 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 70
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 71 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 130
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 131 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 189
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 190 TEYLEERRIKEIVKKHSQFIGYPITLF 216
>pdb|2XDU|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 236
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 28 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 87
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 88 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 147
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 148 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 206
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 207 TEYLEERRIKEIVKKHSQFIGYPITLF 233
>pdb|1OSF|A Chain A, Human Hsp90 In Complex With 17-desmethoxy-17-n,n-
Dimethylaminoethylamino-geldanamycin
Length = 215
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 8 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 68 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 127
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 186
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 187 TEYLEERRIKEIVKKHSQFIGYPITLF 213
>pdb|1BYQ|A Chain A, Hsp90 N-Terminal Domain Bound To Adp-Mg
pdb|1YER|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "closed"
Conformation
pdb|1YES|A Chain A, Human Hsp90 Geldanamycin-Binding Domain, "open"
Conformation
pdb|1YET|A Chain A, Geldanamycin Bound To The Hsp90 Geldanamycin-Binding
Domain
Length = 228
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 8 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 68 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 127
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 128 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 186
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 187 TEYLEERRIKEIVKKHSQFIGYPITLF 213
>pdb|2XJG|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XHX|A Chain A, Structure Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 29 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKE 88
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 89 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 148
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 149 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 207
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 208 TEYLEERRIKEIVKKHSQFIGYPITLF 234
>pdb|1YC1|A Chain A, Crystal Structures Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC3|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
pdb|1YC4|A Chain A, Crystal Structure Of Human Hsp90alpha Complexed With
Dihydroxyphenylpyrazoles
Length = 264
Score = 342 bits (877), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 44 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKE 103
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 104 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 163
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 164 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 222
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 223 TEYLEERRIKEIVKKHSQFIGYPITLF 249
>pdb|1UYI|A Chain A, Human Hsp90-Alpha With
8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-
Pent-9h-Purin-6-Ylamine
Length = 236
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ EL
Sbjct: 18 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 77
Query: 70 IRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVG 129
I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG
Sbjct: 78 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 137
Query: 130 FYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCE 189
FYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ E
Sbjct: 138 FYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTE 196
Query: 190 YLEERRIKDLVKKHSEFISYPIYLW 214
YLEERRIK++VKKHS+FI YPI L+
Sbjct: 197 YLEERRIKEIVKKHSQFIGYPITLF 221
>pdb|2K5B|A Chain A, Human Cdc37-Hsp90 Docking Model Based On Nmr
Length = 210
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 3 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKE 62
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 63 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 122
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 123 VGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 181
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 182 TEYLEERRIKEIVKKHSQFIGYPITLF 208
>pdb|2QFO|A Chain A, Hsp90 Complexed With A143571 And A516383
pdb|2QFO|B Chain B, Hsp90 Complexed With A143571 And A516383
pdb|2QG0|A Chain A, Hsp90 Complexed With A943037
pdb|2QG0|B Chain B, Hsp90 Complexed With A943037
Length = 207
Score = 340 bits (873), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ EL
Sbjct: 2 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELH 61
Query: 70 IRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVG 129
I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG
Sbjct: 62 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 121
Query: 130 FYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCE 189
FYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ E
Sbjct: 122 FYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTE 180
Query: 190 YLEERRIKDLVKKHSEFISYPIYLW 214
YLEERRIK++VKKHS+FI YPI L+
Sbjct: 181 YLEERRIKEIVKKHSQFIGYPITLF 205
>pdb|2QF6|A Chain A, Hsp90 Complexed With A56322
pdb|2QF6|B Chain B, Hsp90 Complexed With A56322
pdb|2QF6|C Chain C, Hsp90 Complexed With A56322
pdb|2QF6|D Chain D, Hsp90 Complexed With A56322
pdb|2QG2|A Chain A, Hsp90 Complexed With A917985
pdb|3OW6|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone I
pdb|3OWB|A Chain A, Crystal Structure Of Hsp90 With Ver-49009
pdb|3OWD|A Chain A, Crystal Structure Of Hsp90 With N-Aryl-Benzimidazolone Ii
Length = 207
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/205 (79%), Positives = 184/205 (89%), Gaps = 1/205 (0%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ EL
Sbjct: 2 ETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYETLTDPSKLDSGKELH 61
Query: 70 IRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVG 129
I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG
Sbjct: 62 INLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 121
Query: 130 FYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCE 189
FYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ E
Sbjct: 122 FYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQTE 180
Query: 190 YLEERRIKDLVKKHSEFISYPIYLW 214
YLEERRIK++VKKHS+FI YPI L+
Sbjct: 181 YLEERRIKEIVKKHSQFIGYPITLF 205
>pdb|2YEE|A Chain A, Hsp90 Inhibitors And Drugs From Fragment And Virtual
Screening
Length = 252
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 188/219 (85%), Gaps = 7/219 (3%)
Query: 2 ADVHMGE------TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEG 55
AD HM + ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E
Sbjct: 20 ADKHMDQPMEEEHVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYES 79
Query: 56 LTDKSKLDAQPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQ 115
LTD SKLD+ EL I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQ
Sbjct: 80 LTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQ 139
Query: 116 AGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGR 175
AGAD+SMIGQFGVGFYSAYLVAEKV V TKHNDDEQY WES AGGSFTV D +GEP+GR
Sbjct: 140 AGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTD-TGEPMGR 198
Query: 176 GTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
GTK+ L LKEDQ EYLEERRIK++VKKHS+F YPI L+
Sbjct: 199 GTKVILHLKEDQTEYLEERRIKEIVKKHSQFQGYPITLF 237
>pdb|2XJJ|A Chain A, Structre Of Hsp90 With Small Molecule Inhibitor Bound
pdb|2XJJ|B Chain B, Structre Of Hsp90 With Small Molecule Inhibitor Bound
Length = 249
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/207 (78%), Positives = 184/207 (88%), Gaps = 1/207 (0%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
E ETFAFQAEI QL+SLIINTFYSNKEIFLRELISNSSDALDKIR+E LTD SKLD+ E
Sbjct: 29 EVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKE 88
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFG 127
L I ++P+K ++TL+I+D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFG
Sbjct: 89 LHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFG 148
Query: 128 VGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQ 187
VGFYSAYLVAEKV V TKHNDD QY WES AGGSFTV D +GEP+GRGTK+ L LKEDQ
Sbjct: 149 VGFYSAYLVAEKVTVITKHNDDVQYAWESSAGGSFTVRTD-TGEPMGRGTKVILHLKEDQ 207
Query: 188 CEYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEERRIK++VKKHS+FI YPI L+
Sbjct: 208 TEYLEERRIKEIVKKHSQFIGYPITLF 234
>pdb|3K60|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
pdb|3K60|B Chain B, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf07_0029) Bound To Adp
Length = 223
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 161/206 (78%), Positives = 182/206 (88%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
TETFAF A+I QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E +TD KL A+PE
Sbjct: 3 TETFAFNADIRQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESITDTQKLSAEPEF 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI+PDK N TL+I DSG+GMTK DL+NNLGTIARSGTK FMEA+QA D+SMIGQFGV
Sbjct: 63 FIRIIPDKTNNTLTIEDSGIGMTKNDLINNLGTIARSGTKAFMEAIQASGDISMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYSAYLVA+ V+V +K+NDDEQYVWES AGGSFTVT+D + E LGRGTKI L LKEDQ
Sbjct: 123 GFYSAYLVADHVVVISKNNDDEQYVWESAAGGSFTVTKDETNEKLGRGTKIILHLKEDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYLW 214
EYLEE+RIKDLVKKHSEFIS+PI L+
Sbjct: 183 EYLEEKRIKDLVKKHSEFISFPIKLY 208
>pdb|1UYM|A Chain A, Human Hsp90-Beta With Pu3
(9-Butyl-8(3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamine)
Length = 220
Score = 332 bits (852), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 181/204 (88%), Gaps = 1/204 (0%)
Query: 11 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELFI 70
TFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E LTD SKLD+ EL I
Sbjct: 13 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKI 72
Query: 71 RIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGF 130
I+P+ +TL+++D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGF
Sbjct: 73 DIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGF 132
Query: 131 YSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCEY 190
YSAYLVAEKV+V TKHNDDEQY WES AGGSFTV D GEP+GRGTK+ L LKEDQ EY
Sbjct: 133 YSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEY 191
Query: 191 LEERRIKDLVKKHSEFISYPIYLW 214
LEERR+K++VKKHS+FI YPI L+
Sbjct: 192 LEERRVKEVVKKHSQFIGYPITLY 215
>pdb|3NMQ|A Chain A, Hsp90b N-Terminal Domain In Complex With Ec44, A
Pyrrolo-Pyrimidine Methoxypyridine Inhibitor
Length = 239
Score = 331 bits (849), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 158/204 (77%), Positives = 181/204 (88%), Gaps = 1/204 (0%)
Query: 11 TFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELFI 70
TFAFQAEI QL+SLIINTFYSNKEIFLRELISN+SDALDKIR+E LTD SKLD+ EL I
Sbjct: 18 TFAFQAEIAQLMSLIINTFYSNKEIFLRELISNASDALDKIRYESLTDPSKLDSGKELKI 77
Query: 71 RIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGF 130
I+P+ +TL+++D+G+GMTKADL+NNLGTIA+SGTK FMEALQAGAD+SMIGQFGVGF
Sbjct: 78 DIIPNPQERTLTLVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGF 137
Query: 131 YSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCEY 190
YSAYLVAEKV+V TKHNDDEQY WES AGGSFTV D GEP+GRGTK+ L LKEDQ EY
Sbjct: 138 YSAYLVAEKVVVITKHNDDEQYAWESSAGGSFTVRAD-HGEPIGRGTKVILHLKEDQTEY 196
Query: 191 LEERRIKDLVKKHSEFISYPIYLW 214
LEERR+K++VKKHS+FI YPI L+
Sbjct: 197 LEERRVKEVVKKHSQFIGYPITLY 220
>pdb|3H80|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213
pdb|3Q5J|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of 17-Dmap- Geldanamycin
pdb|3Q5K|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K213 In The
Presence Of An Inhibitor
pdb|3Q5L|A Chain A, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|B Chain B, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|C Chain C, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3Q5L|D Chain D, Crystal Structure Of The Amino-Terminal Domain Of Hsp90
From Leishmania Major, Lmjf33.0312:m1-K 213 In The
Presence Of 17-Aep- Geldanamycin
pdb|3U67|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp90 From
Leishmania Major(Lmjf33.0312)in Complex With Adp
Length = 231
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query: 7 GETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQP 66
G TETFAFQAEINQL+SLIINTFYSNKEIFLRELISN+SDA DKIR++ LTD S L P
Sbjct: 18 GMTETFAFQAEINQLMSLIINTFYSNKEIFLRELISNASDACDKIRYQSLTDPSVLGESP 77
Query: 67 ELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQF 126
L IR+VPDK NKTL++ D+G+GMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQF
Sbjct: 78 RLCIRVVPDKENKTLTVEDNGIGMTKADLVNNLGTIARSGTKAFMEALEAGGDMSMIGQF 137
Query: 127 GVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKED 186
GVGFYSAYLVA++V VT+K+N DE YVWES AGG+FT+T + + RGT+ITL LKED
Sbjct: 138 GVGFYSAYLVADRVTVTSKNNSDESYVWESSAGGTFTITSTPESD-MKRGTRITLHLKED 196
Query: 187 QCEYLEERRIKDLVKKHSEFISYPIYL 213
Q EYLE RR+K+L+KKHSEFI Y I L
Sbjct: 197 QMEYLEPRRLKELIKKHSEFIGYDIEL 223
>pdb|3O6O|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
pdb|3O6O|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
An The Inhibitor Biib021
Length = 214
Score = 312 bits (799), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 177/207 (85%), Gaps = 1/207 (0%)
Query: 7 GETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQP 66
G TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++ LT++S L +P
Sbjct: 1 GMTETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEP 60
Query: 67 ELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQF 126
L IR++PD+ NKTL++ DSG+GMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQF
Sbjct: 61 HLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQF 120
Query: 127 GVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKED 186
GVGFYSAYLVA++V V +K+N+D+ Y WES AGG+FTVT + L RGT+I L LKED
Sbjct: 121 GVGFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCD-LKRGTRIVLHLKED 179
Query: 187 QCEYLEERRIKDLVKKHSEFISYPIYL 213
Q EYLEERR+KDL+KKHSEFI Y I L
Sbjct: 180 QQEYLEERRLKDLIKKHSEFIGYDIEL 206
>pdb|3OPD|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OPD|C Chain C, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Benzamide Derivative
pdb|3OMU|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
pdb|3OMU|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Trypanosoma Brucei, Tb10.26.1080 In The Presence Of
A Thienopyrimidine Derivative
Length = 231
Score = 311 bits (798), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 177/207 (85%), Gaps = 1/207 (0%)
Query: 7 GETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQP 66
G TETFAFQAEINQL+SLIINTFYSNKEIFLRELISNSSDA DKIR++ LT++S L +P
Sbjct: 18 GMTETFAFQAEINQLMSLIINTFYSNKEIFLRELISNSSDACDKIRYQSLTNQSVLGDEP 77
Query: 67 ELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQF 126
L IR++PD+ NKTL++ DSG+GMTKADLVNNLGTIARSGTK FMEAL+AG D+SMIGQF
Sbjct: 78 HLRIRVIPDRVNKTLTVEDSGIGMTKADLVNNLGTIARSGTKSFMEALEAGGDMSMIGQF 137
Query: 127 GVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKED 186
GVGFYSAYLVA++V V +K+N+D+ Y WES AGG+FTVT + L RGT+I L LKED
Sbjct: 138 GVGFYSAYLVADRVTVVSKNNEDDAYTWESSAGGTFTVTSTPDCD-LKRGTRIVLHLKED 196
Query: 187 QCEYLEERRIKDLVKKHSEFISYPIYL 213
Q EYLEERR+KDL+KKHSEFI Y I L
Sbjct: 197 QQEYLEERRLKDLIKKHSEFIGYDIEL 223
>pdb|1ZW9|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
8-(6-Bromo-
Benzo[1,
3]dioxol-5-Ylsulfanyl)-9-(3-Isopropylamino-Propyl)-
Adenine
pdb|1ZWH|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radester Amine
pdb|2FXS|A Chain A, Yeast Hsp82 In Complex With The Novel Hsp90 Inhibitor
Radamide
Length = 240
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query: 5 HMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDA 64
HM +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+
Sbjct: 20 HMA-SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLET 78
Query: 65 QPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 124
+P+LFIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIG
Sbjct: 79 EPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIG 138
Query: 125 QFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLK 184
QFGVGFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK
Sbjct: 139 QFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 198
Query: 185 EDQCEYLEERRIKDLVKKHSEFISYPIYL 213
+DQ EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 199 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 227
>pdb|4GQT|A Chain A, N-Terminal Domain Of C. Elegans Hsp90
pdb|4GQT|B Chain B, N-Terminal Domain Of C. Elegans Hsp90
Length = 227
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 178/204 (87%), Gaps = 1/204 (0%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
ETFAFQAEI QL+SLIINTFYSNKEI+LRELISN+SDALDKIR++ LT+ S+LD ELF
Sbjct: 9 ETFAFQAEIAQLMSLIINTFYSNKEIYLRELISNASDALDKIRYQALTEPSELDTGKELF 68
Query: 70 IRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVG 129
I+I P+K KTL+I+D+G+GMTKADLVNNLGTIA+SGTK FMEALQAGAD+SMIGQFGVG
Sbjct: 69 IKITPNKEEKTLTIMDTGIGMTKADLVNNLGTIAKSGTKAFMEALQAGADISMIGQFGVG 128
Query: 130 FYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCE 189
FYSA+LVA+KV+VT+K+NDD+ Y WES AGGSF V R + + RGTKI + +KEDQ +
Sbjct: 129 FYSAFLVADKVVVTSKNNDDDSYQWESSAGGSF-VVRPFNDPEVTRGTKIVMHIKEDQID 187
Query: 190 YLEERRIKDLVKKHSEFISYPIYL 213
+LEER+IK++VKKHS+FI YPI L
Sbjct: 188 FLEERKIKEIVKKHSQFIGYPIKL 211
>pdb|2CGF|A Chain A, A Radicicol Analogue Bound To The Atp Binding Site Of The
N- Terminal Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 308 bits (788), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 146/205 (71%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 14 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 73
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 74 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 133
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 134 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 193
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++KKHSEF++YPI L
Sbjct: 194 EYLEEKRIKEVIKKHSEFVAYPIQL 218
>pdb|1A4H|A Chain A, Structure Of The N-Terminal Domain Of The Yeast Hsp90
Chaperone In Complex With Geldanamycin
Length = 230
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 13 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 72
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 73 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 132
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 133 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 192
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 193 EYLEEKRIKEVIKRHSEFVAYPIQL 217
>pdb|2BRE|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2BRE|B Chain B, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2VWC|A Chain A, Structure Of The Hsp90 Inhibitor Macbecin Bound To The N-
Terminus Of Yeast Hsp90
Length = 219
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1US7|A Chain A, Complex Of Hsp90 And P50
pdb|2BRC|A Chain A, Structure Of A Hsp90 Inhibitor Bound To The N-Terminus Of
Yeast Hsp90.
pdb|2IWS|A Chain A, Radicicol Analogues Bound To The Atp Site Of Hsp90
pdb|2IWU|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90
pdb|2IWX|A Chain A, Analogues Of Radicicol Bound To The Atp-Binding Site Of
Hsp90.
pdb|1AMW|A Chain A, Adp Binding Site In The Hsp90 Molecular Chaperone
pdb|2VW5|A Chain A, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|B Chain B, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|C Chain C, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2VW5|D Chain D, Structure Of The Hsp90 Inhibitor 7-O-Carbamoylpremacbecin
Bound To The N- Terminus Of Yeast Hsp90
pdb|2XD6|A Chain A, Hsp90 Complexed With A Resorcylic Acid Macrolactone.
pdb|2XX4|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX5|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1AH8|A Chain A, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH8|B Chain B, Structure Of The Orthorhombic Form Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
pdb|1AH6|A Chain A, Structure Of The Tetragonal Form Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
Length = 220
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1BGQ|A Chain A, Radicicol Bound To The Atp Binding Site Of The N-Terminal
Domain Of The Yeast Hsp90 Chaperone
Length = 225
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 14 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 73
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 74 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 133
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 134 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 193
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 194 EYLEEKRIKEVIKRHSEFVAYPIQL 218
>pdb|2XX2|A Chain A, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|B Chain B, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|C Chain C, Macrolactone Inhibitor Bound To Hsp90 N-Term
pdb|2XX2|D Chain D, Macrolactone Inhibitor Bound To Hsp90 N-Term
Length = 214
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|1AM1|A Chain A, Atp Binding Site In The Hsp90 Molecular Chaperone
Length = 213
Score = 306 bits (785), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 145/205 (70%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 2 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 61
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 62 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 121
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 122 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 181
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 182 EYLEEKRIKEVIKRHSEFVAYPIQL 206
>pdb|3C0E|A Chain A, Yeast Hsp82 N-Terminal Domain: Effects Of Mutants 98-99
Ks- Aa
pdb|3C11|A Chain A, Yeast Hsp82 N-Terminal Domain-Geldanamycin Complex:
Effects Of Mutants 98-99 Ks-Aa
Length = 240
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/209 (69%), Positives = 175/209 (83%), Gaps = 1/209 (0%)
Query: 5 HMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDA 64
HM +ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+
Sbjct: 20 HMA-SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLET 78
Query: 65 QPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIG 124
+P+LFIRI P K L I DSG+GMTKA+L+NNLGTIA +GTK FMEAL AGADVSMIG
Sbjct: 79 EPDLFIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAAAGTKAFMEALSAGADVSMIG 138
Query: 125 QFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLK 184
QFGVGFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK
Sbjct: 139 QFGVGFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLK 198
Query: 185 EDQCEYLEERRIKDLVKKHSEFISYPIYL 213
+DQ EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 199 DDQLEYLEEKRIKEVIKRHSEFVAYPIQL 227
>pdb|2WEP|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Adp
pdb|2WEQ|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With
Geldanamycin
pdb|2WER|A Chain A, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
pdb|2WER|B Chain B, Yeast Hsp90 N-Terminal Domain Li-Iv Mutant With Radicicol
Length = 220
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 143/205 (69%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRE++SN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLREIVSNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2YGE|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 173/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALD+IR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDRIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+L+NNLGTIA SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAELINNLGTIANSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2YGF|A Chain A, L89v, L93i And V136m Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 142/205 (69%), Positives = 174/205 (84%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA+++NN+GTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAEVINNIGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V + +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQMISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2YGA|A Chain A, E88g-n92l Mutant Of N-term Hsp90 Complexed With
Geldanamycin
Length = 220
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 144/205 (70%), Positives = 172/205 (83%)
Query: 9 TETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPEL 68
+ETF FQAEI QL+SLIINT YSNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+L
Sbjct: 3 SETFEFQAEITQLMSLIINTVYSNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDL 62
Query: 69 FIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGV 128
FIRI P K L I DSG+GMTKA L+N LGTIA+SGTK FMEAL AGADVSMIGQFGV
Sbjct: 63 FIRITPKPEQKVLEIRDSGIGMTKAGLINLLGTIAKSGTKAFMEALSAGADVSMIGQFGV 122
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYS +LVA++V V +K NDDEQY+WES AGGSFTVT D E +GRGT + LFLK+DQ
Sbjct: 123 GFYSLFLVADRVQVISKSNDDEQYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQL 182
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
EYLEE+RIK+++K+HSEF++YPI L
Sbjct: 183 EYLEEKRIKEVIKRHSEFVAYPIQL 207
>pdb|2AKP|A Chain A, Hsp90 Delta24-n210 Mutant
pdb|2AKP|B Chain B, Hsp90 Delta24-n210 Mutant
Length = 186
Score = 271 bits (694), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 128/183 (69%), Positives = 155/183 (84%)
Query: 31 SNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELFIRIVPDKANKTLSIIDSGVGM 90
SNKEIFLRELISN+SDALDKIR++ L+D +L+ +P+LFIRI P K L I DSG+GM
Sbjct: 1 SNKEIFLRELISNASDALDKIRYKSLSDPKQLETEPDLFIRITPKPEQKVLEIRDSGIGM 60
Query: 91 TKADLVNNLGTIARSGTKEFMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDE 150
TKA+L+NNLGTIA+SGTK FMEAL AGADVSMIGQFGVGFYS +LVA++V V +K NDDE
Sbjct: 61 TKAELINNLGTIAKSGTKAFMEALSAGADVSMIGQFGVGFYSLFLVADRVQVISKSNDDE 120
Query: 151 QYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQCEYLEERRIKDLVKKHSEFISYP 210
QY+WES AGGSFTVT D E +GRGT + LFLK+DQ EYLEE+RIK+++K+HSEF++YP
Sbjct: 121 QYIWESNAGGSFTVTLDEVNERIGRGTILRLFLKDDQLEYLEEKRIKEVIKRHSEFVAYP 180
Query: 211 IYL 213
I L
Sbjct: 181 IQL 183
>pdb|3PEH|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEH|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
A Thienopyrimidine Derivative
pdb|3PEJ|A Chain A, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
pdb|3PEJ|B Chain B, Crystal Structure Of The N-Terminal Domain Of An Hsp90
From Plasmodium Falciparum, Pfl1070c In The Presence Of
Macbecin
Length = 281
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
E+ +Q E+ +L+ +I+N+ Y+ KE+FLRELISN++DAL+KIRF L+D+S L + +L
Sbjct: 24 ESHQYQTEVTRLMDIIVNSLYTQKEVFLRELISNAADALEKIRFLSLSDESVLGEEKKLE 83
Query: 70 IRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEAL-QAGADVSMIGQFGV 128
IRI +K LSI D+G+GMTK DL+NNLGTIA+SGT F+EA+ ++G D+S+IGQFGV
Sbjct: 84 IRISANKEKNILSITDTGIGMTKVDLINNLGTIAKSGTSNFLEAISKSGGDMSLIGQFGV 143
Query: 129 GFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLFLKEDQC 188
GFYSA+LVA+KVIV TK+NDDEQY+WES A FT+ +D G L RGT+I+L LKED
Sbjct: 144 GFYSAFLVADKVIVYTKNNDDEQYIWESTADAKFTIYKDPRGATLKRGTRISLHLKEDAT 203
Query: 189 EYLEERRIKDLVKKHSEFISYPIYL 213
L ++++ DL+ K+S+FI +PIYL
Sbjct: 204 NLLNDKKLMDLISKYSQFIQFPIYL 228
>pdb|1QY5|A Chain A, Crystal Structure Of The N-Domain Of The Er Hsp90
Chaperone Grp94 In Complex With The Specific Ligand Neca
pdb|1QY8|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With Radicicol
pdb|1QYE|A Chain A, Crystal Structure Of The N-domain Of The Er Hsp90
Chaperone Grp94 In Complex With 2-chlorodideoxyadenosine
Length = 269
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%), Gaps = 6/212 (2%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L E
Sbjct: 4 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEE 63
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-M 122
L ++I DK L + D+GVGMT+ +LV NLGTIA+SGT EF+ EA + G S +
Sbjct: 64 LTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSEL 123
Query: 123 IGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLF 182
IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT ITL
Sbjct: 124 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLV 182
Query: 183 LKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 183 LKEEASDYLELDTIKNLVKKYSQFINFPIYVW 214
>pdb|1U0Y|A Chain A, N-Domain Of Grp94, With The Charged Domain, In Complex
With The Novel Ligand N-Propyl Carboxyamido Adenosine
pdb|1YT2|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n Apo Crystal
Length = 273
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%), Gaps = 6/212 (2%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L E
Sbjct: 8 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-M 122
L ++I DK L + D+GVGMT+ +LV NLGTIA+SGT EF+ EA + G S +
Sbjct: 68 LTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSEL 127
Query: 123 IGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLF 182
IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT ITL
Sbjct: 128 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLV 186
Query: 183 LKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 187 LKEEASDYLELDTIKNLVKKYSQFINFPIYVW 218
>pdb|1U2O|A Chain A, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1U2O|B Chain B, Crystal Structure Of The N-Domain Of Grp94 Lacking The
Charged Domain In Complex With Neca
pdb|1TBW|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TBW|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation
pdb|1TC0|A Chain A, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC0|B Chain B, Ligand Induced Conformational Shifts In The N-Terminal
Domain Of Grp94, Open Conformation Complexed With The
Physiological Partner Atp
pdb|1TC6|A Chain A, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1TC6|B Chain B, Ligand Induced Conformational Shift In The N-Terminal
Domain Of Grp94, Open Conformation Adp-Complex
pdb|1U0Z|A Chain A, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1U0Z|B Chain B, N-Domain Of Grp94 Lacking The Charged Domain In Complex
With Radicicol
pdb|1YSZ|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Neca
pdb|1YT0|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal Soaked With Adp
pdb|1YT1|A Chain A, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|1YT1|B Chain B, Crystal Structure Of The Unliganded Form Of Grp94, The Er
Hsp90: Basis For Nucleotide-Induced Conformational
Change, Grp94n(Delta)41 Apo Crystal
pdb|2EXL|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2EXL|B Chain B, Grp94 N-Terminal Domain Bound To Geldanamycin
pdb|2FYP|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2FYP|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radester
Amine
pdb|2GFD|A Chain A, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GFD|B Chain B, Grp94 In Complex With The Novel Hsp90 Inhibitor Radamide
pdb|2GQP|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2GQP|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand
N-Propyl Carboxyamido Adenosine
pdb|2HCH|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2HCH|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Amino)ethyl Carboxyamido Adenosine
pdb|2H8M|A Chain A, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2H8M|B Chain B, N-Domain Of Grp94 In Complex With The 2-Iodo-Neca
pdb|2HG1|A Chain A, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|2HG1|B Chain B, N-Domain Of Grp94 In Complex With The Novel Ligand N-(2-
Hydroxyl)ethyl Carboxyamido Adenosine
pdb|3O2F|A Chain A, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
pdb|3O2F|B Chain B, Structure Of The N-Domain Of Grp94 Bound To The Hsp90
Inhibitor Pu-H54
Length = 236
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/212 (58%), Positives = 160/212 (75%), Gaps = 6/212 (2%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L E
Sbjct: 8 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-M 122
L ++I DK L + D+GVGMT+ +LV NLGTIA+SGT EF+ EA + G S +
Sbjct: 68 LTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAKSGTSEFLNKMTEAQEDGQSTSEL 127
Query: 123 IGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLF 182
IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT ITL
Sbjct: 128 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLV 186
Query: 183 LKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 187 LKEEASDYLELDTIKNLVKKYSQFINFPIYVW 218
>pdb|2ESA|A Chain A, Grp94 N-Terminal Domain Bound To Geldanamycin: Effects Of
Mutants 168- 169 Ks-Aa
Length = 236
Score = 243 bits (621), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 123/212 (58%), Positives = 159/212 (75%), Gaps = 6/212 (2%)
Query: 8 ETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPE 67
++E FAFQAE+N+++ LIIN+ Y NKEIFLRELISN+SDALDKIR LTD++ L E
Sbjct: 8 KSEKFAFQAEVNRMMKLIINSLYKNKEIFLRELISNASDALDKIRLISLTDENALAGNEE 67
Query: 68 LFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFM----EALQAGADVS-M 122
L ++I DK L + D+GVGMT+ +LV NLGTIA +GT EF+ EA + G S +
Sbjct: 68 LTVKIKCDKEKNLLHVTDTGVGMTREELVKNLGTIAAAGTSEFLNKMTEAQEDGQSTSEL 127
Query: 123 IGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKITLF 182
IGQFGVGFYSA+LVA+KVIVT+KHN+D Q++WES + F+V D G LGRGT ITL
Sbjct: 128 IGQFGVGFYSAFLVADKVIVTSKHNNDTQHIWESDS-NEFSVIADPRGNTLGRGTTITLV 186
Query: 183 LKEDQCEYLEERRIKDLVKKHSEFISYPIYLW 214
LKE+ +YLE IK+LVKK+S+FI++PIY+W
Sbjct: 187 LKEEASDYLELDTIKNLVKKYSQFINFPIYVW 218
>pdb|2GQ0|A Chain A, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
pdb|2GQ0|B Chain B, Crystal Structure Of The Middle Domain Of Htpg, The E.
Coli Hsp90
Length = 303
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 169/255 (66%), Gaps = 4/255 (1%)
Query: 269 KPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDLFD 328
+ +W R E+T EEY FYK + +D+ D L H VEG+ E+ ++L++P +AP+D+++
Sbjct: 3 QALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTSLLYIPSQAPWDMWN 62
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKILKVIR 388
R + +KLYV+RVFIMD+ E+ +P YL FV+G++DS DLPLN+SRE LQ + + + +R
Sbjct: 63 -RDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNVSREILQDSTVTRNLR 121
Query: 389 KNLVKKCIEMFNEIA-ENKEDYAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTK--S 445
L K+ ++M ++A ++ E Y F+ F +K G ED N+ +A LLRF ST S
Sbjct: 122 NALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFANQEAIAKLLRFASTHTDS 181
Query: 446 GDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDEYAV 505
+ SL+DYV+RMKEGQ+ IYYIT +S A ++SP LE L+KKG EVL + D IDE+ +
Sbjct: 182 SAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELLRKKGIEVLLLSDRIDEWMM 241
Query: 506 GQLKEYDGKKLVSAT 520
L E+DGK S +
Sbjct: 242 NYLTEFDGKPFQSVS 256
>pdb|1Y6Z|A Chain A, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
pdb|1Y6Z|B Chain B, Middle Domain Of Plasmodium Falciparum Putative Heat Shock
Protein Pf14_0417
Length = 263
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/246 (44%), Positives = 163/246 (66%), Gaps = 7/246 (2%)
Query: 268 QKPIWLRKPEEVTKEEYASFYKSLTNDWEDHLAVKHFSVEGQLEFKAILFVPRRAPFDL- 326
Q PIW + + +T+ +Y SFYK+ ++D LA HF+VEGQ+ F +IL++P P++L
Sbjct: 3 QLPIWKQDEKSLTENDYYSFYKNTFKAYDDPLAYVHFNVEGQISFNSILYIPGSLPWELS 62
Query: 327 ---FDTRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQNKI 383
FD + I+LYV+RVFI D E IP +L F++G+VDS++LPLN+ RE LQ++K+
Sbjct: 63 KNMFDEESR--GIRLYVKRVFINDKFSESIPRWLTFLRGIVDSENLPLNVGREILQKSKM 120
Query: 384 LKVIRKNLVKKCIEMFNEIAENKED-YAKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHS 442
L +I K +V K I M + E D + KF + F K +K+G+ ED +N+ ++A L+ F+S
Sbjct: 121 LSIINKRIVLKSISMMKGLKETGGDKWTKFLNTFGKYLKIGVVEDKENQEEIASLVEFYS 180
Query: 443 TKSGDEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKKKGYEVLFMVDAIDE 502
SGD+ T L Y+ MKE QK IYYI+GE++K +NSP LE+LK Y+VLF ++ IDE
Sbjct: 181 INSGDKKTDLDSYIENMKEDQKCIYYISGENKKTAQNSPSLEKLKALNYDVLFSLEPIDE 240
Query: 503 YAVGQL 508
+ + L
Sbjct: 241 FCLSSL 246
>pdb|2IOR|A Chain A, Crystal Structure Of The N-Terminal Domain Of Htpg, The
Escherichia Coli Hsp90, Bound To Adp
Length = 235
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 149/212 (70%), Gaps = 8/212 (3%)
Query: 5 HMGETETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDA 64
HM ET FQ+E+ QLL L+I++ YSNKEIFLRELISN+SDA DK+RF L++ +
Sbjct: 20 HMKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAADKLRFRALSNPDLYEG 79
Query: 65 QPELFIRIVPDKANKTLSIIDSGVGMTKADLVNNLGTIARSGTKEFMEALQA--GADVSM 122
EL +R+ DK +TL+I D+GVGMT+ +++++LGTIA+SGTK F+E+L + D +
Sbjct: 80 DGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGTKSFLESLGSDQAKDSQL 139
Query: 123 IGQFGVGFYSAYLVAEKVIVTTK---HNDDEQYVWESQAGGSFTVTRDVSGEPLGRGTKI 179
IGQFGVGFYSA++VA+KV V T+ + WES G +TV D++ E RGT+I
Sbjct: 140 IGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEGEYTVA-DITKED--RGTEI 196
Query: 180 TLFLKEDQCEYLEERRIKDLVKKHSEFISYPI 211
TL L+E + E+L++ R++ ++ K+S+ I+ P+
Sbjct: 197 TLHLREGEDEFLDDWRVRSIISKYSDHIALPV 228
>pdb|3IED|A Chain A, Crystal Structure Of N-Terminal Domain Of Plasmodium
Falciparum Hsp90 (Pf14_0417) In Complex With Amppn
Length = 272
Score = 179 bits (454), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 103/249 (41%), Positives = 153/249 (61%), Gaps = 47/249 (18%)
Query: 10 ETFAFQAEINQLLSLIINTFYSNKEIFLRELISNSSDALDKIRFEGLTDKSKLDAQPELF 69
E + F+AE+N+++ +I+N+ Y++K++FLRELISN+SDA DK R + + +KL E+
Sbjct: 25 EKYNFKAEVNKVMDIIVNSLYTDKDVFLRELISNASDACDKKRI--ILENNKLIKDAEVV 82
Query: 70 IR--------------------------------------IVPDKANKTLSIIDSGVGMT 91
I PDK KTL+I D+G+GM
Sbjct: 83 TNEEIKNETEKEKTENVNESTDKKENVEEEKNDIKKLIIKIKPDKEKKTLTITDNGIGMD 142
Query: 92 KADLVNNLGTIARSGTKEFMEALQAG-ADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDE 150
K++L+NNLGTIA+SGT +F++ ++ G AD ++IGQFGVGFYS++LV+ +V V TK +D+
Sbjct: 143 KSELINNLGTIAQSGTAKFLKQIEEGKADSNLIGQFGVGFYSSFLVSNRVEVYTKK-EDQ 201
Query: 151 QYVWESQAGGSFTVTR----DVSGEPL-GRGTKITLFLKEDQCEYLEERRIKDLVKKHSE 205
Y W S GSF+V D + + G GTKI L LKE+ EYLE+ ++K+L+KK+SE
Sbjct: 202 IYRWSSDLKGSFSVNEIKKYDQEYDDIKGSGTKIILHLKEECDEYLEDYKLKELIKKYSE 261
Query: 206 FISYPIYLW 214
FI +PI +W
Sbjct: 262 FIKFPIEIW 270
>pdb|1SF8|A Chain A, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|B Chain B, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|C Chain C, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|D Chain D, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|E Chain E, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|F Chain F, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|G Chain G, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
pdb|1SF8|H Chain H, Crystal Structure Of The Carboxy-terminal Domain Of Htpg,
The E. Coli Hsp90
Length = 126
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 10/118 (8%)
Query: 550 IKEILGDNVEKVVVSDRIVDSPCCLVTGEYGWSANMERIMKAQALRDXXXXXXXXXKKTM 609
+K +LG+ V+ V ++ R+ D+P + T S ++ A + K
Sbjct: 17 VKALLGERVKDVRLTHRLTDTPAIVSTDADEXSTQXAKLFAAAGQK------VPEVKYIF 70
Query: 610 EINPDNGIMEELRKRAEVDKNDKSVKDXXXXXXXXXXXTSGFSLDDPNTFAARIHRML 667
E+NPD+ ++ KRA +++ + +L+DPN F R +++L
Sbjct: 71 ELNPDHVLV----KRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRXNQLL 124
>pdb|1LDK|A Chain A, Structure Of The Cul1-Rbx1-Skp1-F Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 396
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 29/133 (21%)
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQ-------N 381
+ K LN I Y+ R ++ C+E KG+ + L L R+ L + N
Sbjct: 115 SSKVLNGICAYLNRHWVRRECDE-------GRKGIYEIYSLALVTWRDCLFRPLNKQVTN 167
Query: 382 KILKVIRK---------NLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRA 432
+LK+I K L+ ++ + E+ N++D AF+K L ++++S
Sbjct: 168 AVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD------AFAKGPTLTVYKESFESQ 221
Query: 433 KLADLLRFHSTKS 445
LAD RF++ +S
Sbjct: 222 FLADTERFYTRES 234
>pdb|1LDJ|A Chain A, Structure Of The Cul1-rbx1-skp1-f Boxskp2 Scf Ubiquitin
Ligase Complex
Length = 760
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 29/135 (21%)
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQ-------N 381
+ K LN I Y+ R ++ C+E KG+ + L L R+ L + N
Sbjct: 113 SSKVLNGICAYLNRHWVRRECDE-------GRKGIYEIYSLALVTWRDCLFRPLNKQVTN 165
Query: 382 KILKVIRK---------NLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRA 432
+LK+I K L+ ++ + E+ N++D AF+K L ++++S
Sbjct: 166 AVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD------AFAKGPTLTVYKESFESQ 219
Query: 433 KLADLLRFHSTKSGD 447
LAD RF++ +S +
Sbjct: 220 FLADTERFYTRESTE 234
>pdb|1U6G|A Chain A, Crystal Structure Of The Cand1-Cul1-Roc1 Complex
Length = 776
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 29/135 (21%)
Query: 329 TRKKLNNIKLYVRRVFIMDNCEELIPEYLGFVKGVVDSDDLPLNISRETLQQ-------N 381
+ K LN I Y+ R ++ C+E KG+ + L L R+ L + N
Sbjct: 129 SSKVLNGICAYLNRHWVRRECDE-------GRKGIYEIYSLALVTWRDCLFRPLNKQVTN 181
Query: 382 KILKVIRK---------NLVKKCIEMFNEIAENKEDYAKFYDAFSKNIKLGIHEDSQNRA 432
+LK+I K L+ ++ + E+ N++D AF+K L ++++S
Sbjct: 182 AVLKLIEKERNGETINTRLISGVVQSYVELGLNEDD------AFAKGPTLTVYKESFESQ 235
Query: 433 KLADLLRFHSTKSGD 447
LAD RF++ +S +
Sbjct: 236 FLADTERFYTRESTE 250
>pdb|3ML1|A Chain A, Crystal Structure Of The Periplasmic Nitrate Reductase
From Cupriavidus Necator
Length = 802
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 59 KSKLDAQPELFIRIVPDKANKTLSIIDSGVGM-TKADLVNNL--------GTIARSGTKE 109
K+KLD EL+ D K +S+ G T+ NN+ G IA G
Sbjct: 323 KAKLDQLAELYA----DPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSP 378
Query: 110 FMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAG 159
F Q A + VG +S L A+ V+ KH ++ + +W+ G
Sbjct: 379 FSLTGQPSACGTARE---VGTFSHRLPADMVVTNPKHREEAERIWKLPPG 425
>pdb|3O5A|A Chain A, Crystal Structure Of Partially Reduced Periplasmic Nitrate
Reductase From Cupriavidus Necator Using Ionic Liquids
Length = 802
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 16/110 (14%)
Query: 59 KSKLDAQPELFIRIVPDKANKTLSIIDSGVGM-TKADLVNNL--------GTIARSGTKE 109
K+KLD EL+ D K +S+ G T+ NN+ G IA G
Sbjct: 323 KAKLDQLAELYA----DPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSP 378
Query: 110 FMEALQAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYVWESQAG 159
F Q A + VG +S L A+ V+ KH ++ + +W+ G
Sbjct: 379 FSLTGQPSACGTARE---VGTFSHRLPADMVVTNPKHREEAERIWKLPPG 425
>pdb|3I0W|A Chain A, Crystal Structure Of Clostridium Acetobutylicum
8-Oxoguanine GlycosylaseLYASE IN COMPLEX WITH DSDNA
CONTAINING CYTOSINE Opposite To 8-Oxog
Length = 290
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 388 RKNLVKKCIEMFNEIAENKEDY-AKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSG 446
R ++KKCI +E A K +Y K Y AF KL HE ++ F +G
Sbjct: 129 RIPMIKKCINNISEKAGKKLEYKGKIYYAFPTVDKL--HEFTEK--------DFEECTAG 178
Query: 447 DEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKK 488
LKD V R+ G+ ++ YI K++ ++ E LKK
Sbjct: 179 FRAKYLKDTVDRIYNGELNLEYI-----KSLNDNECHEELKK 215
>pdb|3F10|A Chain A, Crystal Structure Of Clostridium Acetobutylicum
8-Oxoguanine Dna Glycosylase In Complex With
8-Oxoguanosine
Length = 292
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 388 RKNLVKKCIEMFNEIAENKEDY-AKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSG 446
R ++KKCI +E A K +Y K Y AF KL HE ++ F +G
Sbjct: 129 RIPMIKKCINNISEKAGKKLEYKGKIYYAFPTVDKL--HEFTEK--------DFEECTAG 178
Query: 447 DEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKK 488
LKD V R+ G+ ++ YI K++ ++ E LKK
Sbjct: 179 FRAKYLKDTVDRIYNGELNLEYI-----KSLNDNECHEELKK 215
>pdb|3I0X|A Chain A, Crystal Structure Of Clostridium Acetobutylicum
8-Oxoguanine GlycosylaseLYASE IN COMPLEX WITH DSDNA
CONTAINING ADENINE Opposite To 8-Oxog
Length = 291
Score = 29.3 bits (64), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 388 RKNLVKKCIEMFNEIAENKEDY-AKFYDAFSKNIKLGIHEDSQNRAKLADLLRFHSTKSG 446
R ++KKCI +E A K +Y K Y AF KL HE ++ F +G
Sbjct: 129 RIPMIKKCINNISEKAGKKLEYKGKIYYAFPTVDKL--HEFTEK--------DFEECTAG 178
Query: 447 DEMTSLKDYVTRMKEGQKDIYYITGESRKAVENSPFLERLKK 488
LKD V R+ G+ ++ YI K++ ++ E LKK
Sbjct: 179 FRAKYLKDTVDRIYNGELNLEYI-----KSLNDNECHEELKK 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,828,939
Number of Sequences: 62578
Number of extensions: 686510
Number of successful extensions: 2000
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 101
length of query: 702
length of database: 14,973,337
effective HSP length: 106
effective length of query: 596
effective length of database: 8,340,069
effective search space: 4970681124
effective search space used: 4970681124
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)