BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005329
(702 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containing protein At3g47840
OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1
Length = 706
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/643 (60%), Positives = 485/643 (75%), Gaps = 3/643 (0%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFS--RVWVEP 102
NS L+ L+ +G L AR++FD M D +SWT++I YV A +S EAL LFS RV V+
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRV-VDH 102
Query: 103 QMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELG 162
++ D +LS+ LKAC + N+ YGESLH Y VKT ++SV+VGS+LLDMY ++GKI+
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 163 CRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADS 222
CRVF EMP RN V+WTAIITGLV AG KEGL YF+EM RS+E D+YTFAI LKA A
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 223 GALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII 282
+ +G+ IHT ++ RGF VANSLATMY++CG++ L LFE MS RDV+SWT++I
Sbjct: 223 RQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLI 282
Query: 283 TSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLV 342
+Y ++G+E A + F++M+ S V PNE TFA++ SA A+L+R+ WGEQLH +VL LGL
Sbjct: 283 VAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLN 342
Query: 343 DSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALM 402
DSLSV+NS+M MYS CG L S S++F GM RDIISWSTIIGGY Q G+ EE F+Y + M
Sbjct: 343 DSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM 402
Query: 403 RREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
R+ G +P +FA AS+LSV GNMA++E G+Q+HA + GLE+ + ++S+LINMYSKCGSI
Sbjct: 403 RQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSI 462
Query: 463 KEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTAC 522
KEAS IF ET+ DDIVS TAMINGYAEHG S+EAI LFEK VG RPDSVTF+ VLTAC
Sbjct: 463 KEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTAC 522
Query: 523 SHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVV 582
+H+G +DLGFHYFN+M + Y P+KEHYGCM+DLLCRAGRLSDAE MI M +KDDVV
Sbjct: 523 THSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Query: 583 WSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRS 642
W+TLL AC +GD+ GR AE+ILEL P+CA +TLANIY++ G EAA VRK M++
Sbjct: 583 WTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKA 642
Query: 643 KGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS 685
KGVIKEPGWS IK+KD VSAFVS DR H Q EDIY +L+L S
Sbjct: 643 KGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILELAVS 685
Score = 161 bits (408), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 6/349 (1%)
Query: 242 VVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM 301
+V F NS G L + ++F++M D++SWT+II YV + A F M
Sbjct: 38 MVKFDPNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAM 97
Query: 302 QESD--VKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
+ D V P+ + ++ A + I +GE LHA+ ++ L+ S+ V +S++ MY + G
Sbjct: 98 RVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVG 157
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLS 419
++ + VF M R+ ++W+ II G G +E Y + M R + + FA L
Sbjct: 158 KIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALK 217
Query: 420 VCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVS 479
C + ++ GK IH HV+ G T + ++L MY++CG +++ +F D+VS
Sbjct: 218 ACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVS 277
Query: 480 WTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFH-YFNLM 538
WT++I Y G +A+ F K+ + P+ TF + +AC+ + G + N++
Sbjct: 278 WTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVL 337
Query: 539 SDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
S G S M+ + G L A + + M +D + WST++
Sbjct: 338 S--LGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGM-RCRDIISWSTII 383
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/649 (35%), Positives = 368/649 (56%), Gaps = 72/649 (11%)
Query: 126 YGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLV 185
Y +H +K+GF N +F+ + L+D Y+K G +E G +VFD+MP RN+ +W +++TGL
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 186 RAG-----------------------------HNK--EGLIYFAEMWRSKEQGDSYTFAI 214
+ G H++ E L YFA M + + Y+FA
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 215 VLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRD 274
VL A + +N G ++H+++ K F ++ ++L MYSKCG ++ + R+F+ M R+
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 275 VISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHA 334
V+SW ++IT + Q G A D F M ES V+P+E T A++ISA A+L+ I+ G+++H
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHG 277
Query: 335 HVLRLG-LVDSLSVANSIMAMYSKCGQLTSTSIVFHGM-IR------------------- 373
V++ L + + ++N+ + MY+KC ++ +F M IR
Sbjct: 278 RVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTK 337
Query: 374 -----------RDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCG 422
R+++SW+ +I GY+Q G EEA L++RE P ++FA++L C
Sbjct: 338 AARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 423 NMAILEQGKQIHAHVMSIGL------ERTAMIKSALINMYSKCGSIKEASQIFYETESDD 476
++A L G Q H HV+ G E + ++LI+MY KCG ++E +F + D
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 477 IVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFN 536
VSW AMI G+A++GY EA+ LF ++ G +PD +T +GVL+AC HAG V+ G HYF+
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 537 LMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDV 596
M+ +G P ++HY CM+DLL RAG L +A++MIE MP Q D V+W +LL AC V ++
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 597 NCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKV 656
G++ AEK+LE+ PS +G ++ L+N+YA G+W + VRK MR +GV K+PG S IK+
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 657 KDQVSAFVSSDRRHSQGEDIYRMLDLLASR---ESDIDDLDSLVHDAED 702
+ F+ D+ H + + I+ +LD+L + E D ++ SL + D
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSLSSEEMD 686
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 159/527 (30%), Positives = 258/527 (48%), Gaps = 76/527 (14%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
NS + L K G+L +A +F +M +RD+ +W +++SG+ + EAL F+ + E +
Sbjct: 90 NSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFV 149
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
++ + + L AC+ ++N G +H K+ F++ V++GSAL+DMY+K G + R
Sbjct: 150 -LNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQR 208
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
VFDEM RNVVSW ++IT + G E L F M S+ + D T A V+ A A A
Sbjct: 209 VFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 225 LNFGREIHTIMLKRG---FDVVSFVANSLATMYSKCGKLD-------------------- 261
+ G+E+H ++K D++ ++N+ MY+KC ++
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDII--LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSM 326
Query: 262 ---YSLR--------LFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNE 310
Y++ +F +M+ R+V+SW +I Y Q GE E A F ++ V P
Sbjct: 327 ISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTH 386
Query: 311 YTFAAIISASANLARIQWGEQLHAHVLRLGLV------DSLSVANSIMAMYSKCGQLTST 364
Y+FA I+ A A+LA + G Q H HVL+ G D + V NS++ MY KCG +
Sbjct: 387 YSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEG 446
Query: 365 SIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNM 424
+VF M+ RD +SW+ +I G++Q GY EA E M G +P+ VLS CG+
Sbjct: 447 YLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHA 506
Query: 425 AILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMI 484
+E+G+ + + ++ F D +T M+
Sbjct: 507 GFVEEGRHYFSSM----------------------------TRDFGVAPLRD--HYTCMV 536
Query: 485 NGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
+ G+ +EA + E++PM +PDSV + +L AC + LG
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPM---QPDSVIWGSLLAACKVHRNITLG 580
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650
OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/655 (34%), Positives = 359/655 (54%), Gaps = 8/655 (1%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G L A +F M+QRD +++ TLI+G + +A+ LF R+ ++ + D L+
Sbjct: 337 GNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDG-LEPDSNTLASL 395
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
+ AC+ + + G+ LH YT K GF ++ + ALL++Y K IE F E + NV
Sbjct: 396 VVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV 455
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
V W ++ + F +M + + YT+ +LK G L G +IH+
Sbjct: 456 VLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQ 515
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
++K F + ++V + L MY+K GKLD + + R + +DV+SWTT+I Y Q ++ A
Sbjct: 516 IIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKA 575
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAM 354
F +M + ++ +E +SA A L ++ G+Q+HA G L N+++ +
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 355 YSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAF 414
YS+CG++ + + F D I+W+ ++ G+ Q G EEA M REG N F F
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 415 ASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETES 474
S + A ++QGKQ+HA + G + + +ALI+MY+KCGSI +A + F E +
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 475 DDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHY 534
+ VSW A+IN Y++HG+ EA+ F+++ +RP+ VT +GVL+ACSH GLVD G Y
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 535 FNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQG 594
F M+ +YG P EHY C++D+L RAG LS A+ I+ MP + D +VW TLL AC+V
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 595 DVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRI 654
++ G A +LEL P + T++ L+N+YA +W R+ M+ KGV KEPG S I
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 655 KVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI-------DDLDSLVHDAED 702
+VK+ + +F D+ H ++I+ L R S+I L+ L H+ +D
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKD 990
Score = 285 bits (730), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 160/599 (26%), Positives = 310/599 (51%), Gaps = 9/599 (1%)
Query: 28 LLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMD 87
+L+QG + V P ++ ++G++ AR++FD + +D SW +ISG K
Sbjct: 213 ILYQGLRDSTVVCNPLIDL----YSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 88 SIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGS 147
EA+ LF ++V M P+ S L AC ++ GE LHG +K GF + +V +
Sbjct: 269 EAEAIRLFCDMYVLGIMPT-PYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCN 327
Query: 148 ALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQG 207
AL+ +Y LG + +F M R+ V++ +I GL + G+ ++ + F M +
Sbjct: 328 ALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 208 DSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLF 267
DS T A ++ A + G L G+++H K GF + + +L +Y+KC ++ +L F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 268 ERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQ 327
+V+ W ++ +Y + + N+F F +MQ ++ PN+YT+ +I+ L ++
Sbjct: 448 LETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLE 507
Query: 328 WGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYS 387
GEQ+H+ +++ + V + ++ MY+K G+L + + +D++SW+T+I GY+
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 388 QGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAM 447
Q ++++A M G R +E + +S C + L++G+QIHA G
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLP 627
Query: 448 IKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVG 507
++AL+ +YS+CG I+E+ F +TE+ D ++W A+++G+ + G ++EA+ +F ++ G
Sbjct: 628 FQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREG 687
Query: 508 LRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDA 567
+ ++ TF + A S + G +++ K G+ E +I + + G +SDA
Sbjct: 688 IDNNNFTFGSAVKAASETANMKQGKQVHAVIT-KTGYDSETEVCNALISMYAKCGSISDA 746
Query: 568 ENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAA 626
E + K++V W+ ++ A G + + +++ +H + H+TL + +A
Sbjct: 747 EKQFLEVS-TKNEVSWNAIINAYSKHGFGSEALDSFDQM--IHSNVRPNHVTLVGVLSA 802
Score = 239 bits (610), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 145/542 (26%), Positives = 261/542 (48%), Gaps = 4/542 (0%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G L+ A K+FD M +R +W +I E LF R+ V + + S
Sbjct: 134 GDLYGAFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRM-VSENVTPNEGTFSGV 192
Query: 115 LKAC-ALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRN 173
L+AC +V + E +H + G +S V + L+D+Y++ G ++L RVFD + L++
Sbjct: 193 LEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKD 252
Query: 174 VVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
SW A+I+GL + E + F +M+ Y F+ VL A +L G ++H
Sbjct: 253 HSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHG 312
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
++LK GF ++V N+L ++Y G L + +F MS RD +++ T+I Q G E
Sbjct: 313 LVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEK 372
Query: 294 AFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMA 353
A + F RM ++P+ T A+++ A + + G+QLHA+ +LG + + +++
Sbjct: 373 AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLN 432
Query: 354 MYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFA 413
+Y+KC + + F +++ W+ ++ Y +F M+ E PN++
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYT 492
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE 473
+ S+L C + LE G+QIH+ ++ + A + S LI+MY+K G + A I
Sbjct: 493 YPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFA 552
Query: 474 SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFH 533
D+VSWT MI GY ++ + +A+ F ++ G+R D V ++AC+ + G
Sbjct: 553 GKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEG-Q 611
Query: 534 YFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQ 593
+ + GF ++ L R G++ ++ E D++ W+ L+
Sbjct: 612 QIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNIAWNALVSGFQQS 670
Query: 594 GD 595
G+
Sbjct: 671 GN 672
Score = 220 bits (560), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 144/507 (28%), Positives = 247/507 (48%), Gaps = 16/507 (3%)
Query: 84 KAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSV 143
K +DS+E + P ++L LK N +++ G LH +K G ++
Sbjct: 70 KRIDSVENRG------IRPNHQTLKWLLEGCLKT---NGSLDEGRKLHSQILKLGLDSNG 120
Query: 144 FVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIY--FAEMW 201
+ L D Y G + +VFDEMP R + +W +I L A N G ++ F M
Sbjct: 121 CLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKEL--ASRNLIGEVFGLFVRMV 178
Query: 202 RSKEQGDSYTFAIVLKAS-ADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKL 260
+ TF+ VL+A S A + +IH +L +G + V N L +YS+ G +
Sbjct: 179 SENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
Query: 261 DYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISAS 320
D + R+F+ + +D SW +I+ + E A F M + P Y F++++SA
Sbjct: 239 DLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSAC 298
Query: 321 ANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWS 380
+ ++ GEQLH VL+LG V N+++++Y G L S +F M +RD ++++
Sbjct: 299 KKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYN 358
Query: 381 TIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSI 440
T+I G SQ GY E+A E M +G P+ AS++ C L +G+Q+HA+ +
Sbjct: 359 TLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Query: 441 GLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLF 500
G I+ AL+N+Y+KC I+ A F ETE +++V W M+ Y + + +F
Sbjct: 419 GFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF 478
Query: 501 EKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCR 560
++ + + P+ T+ +L C G ++LG + + K F + +ID+ +
Sbjct: 479 RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQII-KTNFQLNAYVCSVLIDMYAK 537
Query: 561 AGRLSDAENMIENMPHQKDDVVWSTLL 587
G+L A +++ KD V W+T++
Sbjct: 538 LGKLDTAWDILIRFA-GKDVVSWTTMI 563
Score = 186 bits (472), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 114/374 (30%), Positives = 188/374 (50%), Gaps = 13/374 (3%)
Query: 222 SGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTI 281
+G+L+ GR++H+ +LK G D ++ L Y G L + ++F+ M R + +W +
Sbjct: 98 NGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 282 ITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISAS-ANLARIQWGEQLHAHVLRLG 340
I F FVRM +V PNE TF+ ++ A EQ+HA +L G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 341 LVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLA 400
L DS V N ++ +YS+ G + VF G+ +D SW +I G S+ E EA
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 401 LMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCG 460
M G P +AF+SVLS C + LE G+Q+H V+ +G + +AL+++Y G
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLG 337
Query: 461 SIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLT 520
++ A IF D V++ +ING ++ GY ++A+ LF+++ + GL PDS T ++
Sbjct: 338 NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVV 397
Query: 521 ACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDA-----ENMIENMP 575
ACS G + G + + K GF + + G +++L + + A E +EN+
Sbjct: 398 ACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENV- 455
Query: 576 HQKDDVVWSTLLRA 589
V+W+ +L A
Sbjct: 456 -----VLWNVMLVA 464
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 229/656 (34%), Positives = 377/656 (57%), Gaps = 10/656 (1%)
Query: 52 VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFIL 111
+K D RK+FD M +R+ ++WTTLISGY + + E L LF R+ E + F
Sbjct: 139 MKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP-NSFTF 197
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
+ AL A G +H VK G ++ V ++L+++Y K G + +FD+ +
Sbjct: 198 AAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEV 257
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
++VV+W ++I+G G + E L F M + + +FA V+K A+ L F ++
Sbjct: 258 KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQL 317
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMS-TRDVISWTTIITSYVQMGE 290
H ++K GF + +L YSKC + +LRLF+ + +V+SWT +I+ ++Q
Sbjct: 318 HCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
Query: 291 EENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANS 350
+E A D F M+ V+PNE+T++ I++A ++ ++HA V++ S +V +
Sbjct: 378 KEEAVDLFSEMKRKGVRPNEFTYSVILTALPVIS----PSEVHAQVVKTNYERSSTVGTA 433
Query: 351 IMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPN 410
++ Y K G++ + VF G+ +DI++WS ++ GY+Q G E A + + + G +PN
Sbjct: 434 LLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPN 493
Query: 411 EFAFASVLSVCG-NMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
EF F+S+L+VC A + QGKQ H + L+ + + SAL+ MY+K G+I+ A ++F
Sbjct: 494 EFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVF 553
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
D+VSW +MI+GYA+HG + +A+ +F+++ ++ D VTF+GV AC+HAGLV+
Sbjct: 554 KRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVE 613
Query: 530 LGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
G YF++M P+KEH CM+DL RAG+L A +IENMP+ +W T+L A
Sbjct: 614 EGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAA 673
Query: 590 CMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEP 649
C V GR AEKI+ + P + ++ L+N+YA G W+E A+VRK+M + V KEP
Sbjct: 674 CRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEP 733
Query: 650 GWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI---DDLDSLVHDAED 702
G+S I+VK++ +F++ DR H + IY L+ L++R D+ D ++ D +D
Sbjct: 734 GYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDD 789
Score = 298 bits (764), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 174/543 (32%), Positives = 297/543 (54%), Gaps = 19/543 (3%)
Query: 52 VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFIL 111
V S L++A +FD RD S+ +L+ G+ + + EA LF + M MD I
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH-RLGMEMDCSIF 96
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
S LK A + +G LH +K GF++ V VG++L+D Y K + G +VFDEM
Sbjct: 97 SSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKE 156
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
RNVV+WT +I+G R N E L F M Q +S+TFA L A+ G G ++
Sbjct: 157 RNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQV 216
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
HT+++K G D V+NSL +Y KCG + + LF++ + V++W ++I+ Y G +
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLD 276
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
A F M+ + V+ +E +FA++I ANL +++ EQLH V++ G + ++ ++
Sbjct: 277 LEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTAL 336
Query: 352 MAMYSKCGQLTSTSIVFHGM-IRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPN 410
M YSKC + +F + +++SW+ +I G+ Q +EEA + + M+R+G RPN
Sbjct: 337 MVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPN 396
Query: 411 EFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFY 470
EF ++ +L+ ++ E +HA V+ ER++ + +AL++ Y K G ++EA+++F
Sbjct: 397 EFTYSVILTALPVISPSE----VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 471 ETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDL 530
+ DIV+W+AM+ GYA+ G ++ AI +F ++ G++P+ TF +L C+ A +
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA-ATNASM 511
Query: 531 G----FHYFNLMS--DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWS 584
G FH F + S D V S ++ + + G + AE + + +KD V W+
Sbjct: 512 GQGKQFHGFAIKSRLDSSLCVSS-----ALLTMYAKKGNIESAEEVFKRQ-REKDLVSWN 565
Query: 585 TLL 587
+++
Sbjct: 566 SMI 568
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 118/432 (27%), Positives = 229/432 (53%), Gaps = 8/432 (1%)
Query: 40 STPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVW 99
+ P NS + +K G + AR +FD + ++W ++ISGY +EAL +F +
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 100 VEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKI 159
+ + + + +K CA + + E LH VK GF+ + +AL+ Y+K +
Sbjct: 288 LN-YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 160 ELGCRVFDEMP-LRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKA 218
R+F E+ + NVVSWTA+I+G ++ +E + F+EM R + + +T++++L A
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTA 406
Query: 219 SADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISW 278
E+H ++K ++ S V +L Y K GK++ + ++F + +D+++W
Sbjct: 407 LPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAW 462
Query: 279 TTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIIS-ASANLARIQWGEQLHAHVL 337
+ ++ Y Q GE E A F + + +KPNE+TF++I++ +A A + G+Q H +
Sbjct: 463 SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 522
Query: 338 RLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFE 397
+ L SL V+++++ MY+K G + S VF +D++SW+++I GY+Q G +A +
Sbjct: 523 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALD 582
Query: 398 YLALMRREGPRPNEFAFASVLSVCGNMAILEQG-KQIHAHVMSIGLERTAMIKSALINMY 456
M++ + + F V + C + ++E+G K V + T S ++++Y
Sbjct: 583 VFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLY 642
Query: 457 SKCGSIKEASQI 468
S+ G +++A ++
Sbjct: 643 SRAGQLEKAMKV 654
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 431 bits (1107), Expect = e-119, Method: Compositional matrix adjust.
Identities = 225/633 (35%), Positives = 357/633 (56%), Gaps = 2/633 (0%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G L +A ++FD + + W L++ K+ D ++ LF ++ + + MD + S
Sbjct: 143 GDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKM-MSSGVEMDSYTFSCV 201
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
K+ + +V+ GE LHG+ +K+GF VG++L+ Y K +++ +VFDEM R+V
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
+SW +II G V G ++GL F +M S + D T V ADS ++ GR +H+I
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
+K F N+L MYSKCG LD + +F MS R V+S+T++I Y + G A
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAM 354
F M+E + P+ YT A+++ A + G+++H + L + V+N++M M
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 355 YSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGP-RPNEFA 413
Y+KCG + +VF M +DIISW+TIIGGYS+ Y EA L+ E P+E
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE 473
A VL C +++ ++G++IH ++M G + ++L++MY+KCG++ A +F +
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA 561
Query: 474 SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFH 533
S D+VSWT MI GY HG+ +EAI LF ++ G+ D ++F+ +L ACSH+GLVD G+
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 534 YFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQ 593
+FN+M + P+ EHY C++D+L R G L A IENMP D +W LL C +
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 594 GDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSR 653
DV AEK+ EL P G ++ +ANIYA +W + +RK + +G+ K PG S
Sbjct: 682 HDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSW 741
Query: 654 IKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASR 686
I++K +V+ FV+ D + + E+I L + +R
Sbjct: 742 IEIKGRVNIFVAGDSSNPETENIEAFLRKVRAR 774
Score = 254 bits (649), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 155/549 (28%), Positives = 269/549 (48%), Gaps = 37/549 (6%)
Query: 40 STPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVW 99
S + N+QL+ +SG L +A K+ +
Sbjct: 60 SVTDANTQLRRFCESGNLENAVKL----------------------------------LC 85
Query: 100 VEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKI 159
V + ++DP L L+ CA + ++ G+ + + GFV +GS L MYT G +
Sbjct: 86 VSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDL 145
Query: 160 ELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKAS 219
+ RVFDE+ + + W ++ L ++G + F +M S + DSYTF+ V K+
Sbjct: 146 KEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSF 205
Query: 220 ADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWT 279
+ +++ G ++H +LK GF + V NSL Y K ++D + ++F+ M+ RDVISW
Sbjct: 206 SSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWN 265
Query: 280 TIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRL 339
+II YV G E FV+M S ++ + T ++ + A+ I G +H+ ++
Sbjct: 266 SIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKA 325
Query: 340 GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYL 399
N+++ MYSKCG L S VF M R ++S++++I GY++ G EA +
Sbjct: 326 CFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLF 385
Query: 400 ALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKC 459
M EG P+ + +VL+ C +L++GK++H + L + +AL++MY+KC
Sbjct: 386 EEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC 445
Query: 460 GSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFE-KVPMVGLRPDSVTFMGV 518
GS++EA +F E DI+SW +I GY+++ Y+ EA+ LF + PD T V
Sbjct: 446 GSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACV 505
Query: 519 LTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQK 578
L AC+ D G + + G+ + ++D+ + G L A + +++ K
Sbjct: 506 LPACASLSAFDKGREIHGYIM-RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIA-SK 563
Query: 579 DDVVWSTLL 587
D V W+ ++
Sbjct: 564 DLVSWTVMI 572
Score = 228 bits (582), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 147/478 (30%), Positives = 246/478 (51%), Gaps = 14/478 (2%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
NS + +K+ + ARK+FD MT+RD ISW ++I+GYV + + L++F ++ V +
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLV-SGI 292
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
+D + CA + ++ G ++H VK F + LLDMY+K G ++
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKA 352
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
VF EM R+VVS+T++I G R G E + F EM D YT VL A
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 225 LNFGREIHTIMLKR--GFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII 282
L+ G+ +H + + GFD+ FV+N+L MY+KCG + + +F M +D+ISW TII
Sbjct: 413 LDEGKRVHEWIKENDLGFDI--FVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTII 470
Query: 283 TSYVQMGEEENAFDAF-VRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL 341
Y + A F + ++E P+E T A ++ A A+L+ G ++H +++R G
Sbjct: 471 GGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY 530
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
VANS++ MY+KCG L ++F + +D++SW+ +I GY G+ +EA
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQ 590
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQ---IHAHVMSIGLERTAMIKSALINMYSK 458
MR+ G +E +F S+L C + ++++G + I H I E T + +++M ++
Sbjct: 591 MRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKI--EPTVEHYACIVDMLAR 648
Query: 459 CGSIKEASQIFYETE-SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTF 515
G + +A + D W A++ G H + A + EKV L P++ +
Sbjct: 649 TGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKV--FELEPENTGY 704
>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein At4g39530
OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
Length = 834
Score = 429 bits (1102), Expect = e-119, Method: Compositional matrix adjust.
Identities = 226/660 (34%), Positives = 378/660 (57%), Gaps = 9/660 (1%)
Query: 25 RPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVK 84
+ L+ G VYV T ++ LK G + AR +FD + ++ ++WTT+ISG VK
Sbjct: 171 QSFLVKSGFDRDVYVGTLLIDFYLK----DGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 85 AMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVF 144
S +L LF ++ +E + D +ILS L AC++ + G+ +H + ++ G
Sbjct: 227 MGRSYVSLQLFYQL-MEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 145 VGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSK 204
+ + L+D Y K G++ ++F+ MP +N++SWT +++G + +KE + F M +
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 205 EQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSL 264
+ D Y + +L + A AL FG ++H +K S+V NSL MY+KC L +
Sbjct: 346 LKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDAR 405
Query: 265 RLFERMSTRDVISWTTIITSYVQMG---EEENAFDAFVRMQESDVKPNEYTFAAIISASA 321
++F+ + DV+ + +I Y ++G E A + F M+ ++P+ TF +++ ASA
Sbjct: 406 KVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASA 465
Query: 322 NLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWST 381
+L + +Q+H + + GL + ++++ +YS C L + +VF M +D++ W++
Sbjct: 466 SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNS 525
Query: 382 IIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIG 441
+ GY Q EEA ++ RP+EF FA++++ GN+A ++ G++ H ++ G
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 442 LERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFE 501
LE I +AL++MY+KCGS ++A + F S D+V W ++I+ YA HG ++A+ + E
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 502 KVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRA 561
K+ G+ P+ +TF+GVL+ACSHAGLV+ G F LM ++G P EHY CM+ LL RA
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRA 704
Query: 562 GRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLA 621
GRL+ A +IE MP + +VW +LL C G+V H AE + P +G+ L+
Sbjct: 705 GRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLS 764
Query: 622 NIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLD 681
NIYA+KG W EA +VR+ M+ +GV+KEPG S I + +V F+S D+ H + IY +LD
Sbjct: 765 NIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLD 824
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 175/602 (29%), Positives = 312/602 (51%), Gaps = 17/602 (2%)
Query: 32 GTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEA 91
G +L Y+S +N ++G + ARK+F+ M +R+ +SW+T++S E+
Sbjct: 74 GLELDTYLSNILINL----YSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEES 129
Query: 92 LALFSRVWVEPQMNMDPFILSLALKACA-LNVNVNYGE-SLHGYTVKTGFVNSVFVGSAL 149
L +F W + + + +ILS ++AC+ L+ + L + VK+GF V+VG+ L
Sbjct: 130 LVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLL 189
Query: 150 LDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDS 209
+D Y K G I+ VFD +P ++ V+WT +I+G V+ G + L F ++ D
Sbjct: 190 IDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDG 249
Query: 210 YTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFER 269
Y + VL A + L G++IH +L+ G ++ + + N L Y KCG++ + +LF
Sbjct: 250 YILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNG 309
Query: 270 MSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWG 329
M +++ISWTT+++ Y Q + A + F M + +KP+ Y ++I+++ A+L + +G
Sbjct: 310 MPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFG 369
Query: 330 EQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQG 389
Q+HA+ ++ L + V NS++ MY+KC LT VF D++ ++ +I GYS+
Sbjct: 370 TQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRL 429
Query: 390 GYEEEAFEYLAL---MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTA 446
G + E E L + MR RP+ F S+L ++ L KQIH + GL
Sbjct: 430 GTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDI 489
Query: 447 MIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMV 506
SALI++YS C +K++ +F E + D+V W +M GY + ++EA++LF ++ +
Sbjct: 490 FAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLS 549
Query: 507 GLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSD 566
RPD TF ++TA + V LG F+ K G + ++D+ + G D
Sbjct: 550 RERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNPYITNALLDMYAKCGSPED 608
Query: 567 AENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILE--LHPSCAGTHITLANIY 624
A ++ +D V W++++ + G+ EK++ + P+ +IT +
Sbjct: 609 AHKAFDSAA-SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPN----YITFVGVL 663
Query: 625 AA 626
+A
Sbjct: 664 SA 665
Score = 250 bits (638), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 149/514 (28%), Positives = 271/514 (52%), Gaps = 16/514 (3%)
Query: 124 VNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITG 183
++Y +HG + G ++ + L+++Y++ G + +VF++MP RN+VSW+ +++
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 184 LVRAGHNKEGLIYFAEMWRS-KEQGDSYTFAIVLKASADSGALNFGR----EIHTIMLKR 238
G +E L+ F E WR+ K+ + Y + ++A SG GR ++ + ++K
Sbjct: 120 CNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC--SGLDGRGRWMVFQLQSFLVKS 177
Query: 239 GFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAF 298
GFD +V L Y K G +DY+ +F+ + + ++WTT+I+ V+MG + F
Sbjct: 178 GFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLF 237
Query: 299 VRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKC 358
++ E +V P+ Y + ++SA + L ++ G+Q+HAH+LR GL S+ N ++ Y KC
Sbjct: 238 YQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKC 297
Query: 359 GQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVL 418
G++ + +F+GM ++IISW+T++ GY Q +EA E M + G +P+ +A +S+L
Sbjct: 298 GRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSIL 357
Query: 419 SVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIV 478
+ C ++ L G Q+HA+ + L + + ++LI+MY+KC + +A ++F + D+V
Sbjct: 358 TSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVV 417
Query: 479 SWTAMINGYAEHGYS---QEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYF 535
+ AMI GY+ G EA+++F + +RP +TF+ +L A + + L
Sbjct: 418 LFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Query: 536 NLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGD 595
LM KYG +ID+ L D+ + + M KD V+W+++ + Q +
Sbjct: 478 GLMF-KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMK-VKDLVIWNSMFAGYVQQSE 535
Query: 596 VNCGRHTAEKILELHPSCA-GTHITLANIYAAKG 628
LEL S T AN+ A G
Sbjct: 536 ---NEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 194/372 (52%), Gaps = 20/372 (5%)
Query: 212 FAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMS 271
FA +L+ A L++ +H ++ G ++ ++++N L +YS+ G + Y+ ++FE+M
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 272 TRDVISWTTIITSYVQMGEEENAFDAFVRM-QESDVKPNEYTFAAIISASANL-ARIQWG 329
R+++SW+T++++ G E + F+ + PNEY ++ I A + L R +W
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 330 E-QLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQ 388
QL + +++ G + V ++ Y K G + +VF + + ++W+T+I G +
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 389 GGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMI 448
G + + + + P+ + ++VLS C + LE GKQIHAH++ GLE A +
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASL 286
Query: 449 KSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGL 508
+ LI+ Y KCG + A ++F + +I+SWT +++GY ++ +EA+ LF + GL
Sbjct: 287 MNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGL 346
Query: 509 RPDSVTFMGVLTACSHAGLVDLGF----HYF----NLMSDKYGFVPSKEHYGCMIDLLCR 560
+PD +LT+C A L LGF H + NL +D Y +ID+ +
Sbjct: 347 KPDMYACSSILTSC--ASLHALGFGTQVHAYTIKANLGNDSYV-------TNSLIDMYAK 397
Query: 561 AGRLSDAENMIE 572
L+DA + +
Sbjct: 398 CDCLTDARKVFD 409
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 7/185 (3%)
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE 473
FA +L + + +L +H ++ GLE + + LIN+YS+ G + A ++F +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 474 SDDIVSWTAMINGYAEHGYSQEAIHLF-EKVPMVGLRPDSVTFMGVLTACSHAGLVDLG- 531
++VSW+ M++ HG +E++ +F E P+ + ACS GL G
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 532 FHYFNLMS--DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
+ F L S K GF +ID + G + A + + +P +K V W+T++
Sbjct: 165 WMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISG 223
Query: 590 CMVQG 594
C+ G
Sbjct: 224 CVKMG 228
>sp|P93005|PP181_ARATH Pentatricopeptide repeat-containing protein At2g33680
OS=Arabidopsis thaliana GN=PCMP-E19 PE=3 SV=1
Length = 727
Score = 422 bits (1086), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/666 (34%), Positives = 363/666 (54%), Gaps = 9/666 (1%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVK---AMDSIEALALFSRVWVE 101
N + K G L A +F+ + +D +SW +LI+GY + S + LF + +
Sbjct: 53 NVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQ 112
Query: 102 PQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIEL 161
+ + + L+ KA + + G H VK ++V ++L+ MY K G +E
Sbjct: 113 DILP-NAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVED 171
Query: 162 GCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDS--YTFAIVLKAS 219
G +VF MP RN +W+ +++G G +E + F R KE+G Y F VL +
Sbjct: 172 GLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSL 231
Query: 220 ADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWT 279
A + + GR+IH I +K G ++N+L TMYSKC L+ + ++F+ R+ I+W+
Sbjct: 232 AATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWS 291
Query: 280 TIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRL 339
++T Y Q GE A F RM + +KP+EYT +++A +++ ++ G+QLH+ +L+L
Sbjct: 292 AMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL 351
Query: 340 GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYL 399
G L +++ MY+K G L F + RD+ W+++I GY Q EEA
Sbjct: 352 GFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILY 411
Query: 400 ALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKC 459
M+ G PN+ ASVL C ++A LE GKQ+H H + G I SAL MYSKC
Sbjct: 412 RRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKC 471
Query: 460 GSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVL 519
GS+++ + +F T + D+VSW AMI+G + +G EA+ LFE++ G+ PD VTF+ ++
Sbjct: 472 GSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNII 531
Query: 520 TACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKD 579
+ACSH G V+ G+ YFN+MSD+ G P +HY CM+DLL RAG+L +A+ IE+
Sbjct: 532 SACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHG 591
Query: 580 DVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKM 639
+W LL AC G G + EK++ L + T++ L+ IY A GR R+ V K
Sbjct: 592 LCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKH 651
Query: 640 MRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASR---ESDIDDLDSL 696
MR+ GV KE G S I++K+Q FV D H E+ ++ L++ + E + LDS
Sbjct: 652 MRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLDSS 711
Query: 697 VHDAED 702
+ E+
Sbjct: 712 FVEEEE 717
Score = 238 bits (607), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 136/471 (28%), Positives = 249/471 (52%), Gaps = 9/471 (1%)
Query: 123 NVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIIT 182
N+ G ++HG ++TG + + L++ Y K GK+ +F+ + ++VVSW ++IT
Sbjct: 29 NLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLIT 88
Query: 183 GLVRAGHNKEG---LIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
G + G + F EM ++YT A + KA + + GR+ H +++K
Sbjct: 89 GYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMS 148
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA---FD 296
+V SL MY K G ++ L++F M R+ +W+T+++ Y G E A F+
Sbjct: 149 SFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFN 208
Query: 297 AFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYS 356
F+R +E + ++Y F A++S+ A + G Q+H ++ GL+ ++++N+++ MYS
Sbjct: 209 LFLREKE-EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYS 267
Query: 357 KCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFAS 416
KC L +F R+ I+WS ++ GYSQ G EA + + M G +P+E+
Sbjct: 268 KCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVG 327
Query: 417 VLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDD 476
VL+ C ++ LE+GKQ+H+ ++ +G ER +AL++MY+K G + +A + F + D
Sbjct: 328 VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERD 387
Query: 477 IVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFN 536
+ WT++I+GY ++ ++EA+ L+ ++ G+ P+ T VL ACS ++LG
Sbjct: 388 VALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHG 447
Query: 537 LMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ K+GF + + + G L D + P+ KD V W+ ++
Sbjct: 448 -HTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPN-KDVVSWNAMI 496
Score = 199 bits (507), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 195/375 (52%), Gaps = 11/375 (2%)
Query: 228 GREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQ 287
GR +H +++ G AN L Y+KCGKL + +F + +DV+SW ++IT Y Q
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 288 MGEEENAFDA---FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDS 344
G +++ F M+ D+ PN YT A I A ++L G Q HA V+++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 345 LSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRR 404
+ V S++ MY K G + VF M R+ +WST++ GY+ G EEA + L R
Sbjct: 153 IYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLR 212
Query: 405 EGPR--PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
E +++ F +VLS + G+QIH + GL + +AL+ MYSKC S+
Sbjct: 213 EKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 463 KEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTAC 522
EA ++F + + ++W+AM+ GY+++G S EA+ LF ++ G++P T +GVL AC
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNAC 332
Query: 523 SHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDD 580
S ++ G H F L K GF ++D+ +AG L+DA + + ++D
Sbjct: 333 SDICYLEEGKQLHSFLL---KLGFERHLFATTALVDMYAKAGCLADARKGFDCL-QERDV 388
Query: 581 VVWSTLLRACMVQGD 595
+W++L+ + D
Sbjct: 389 ALWTSLISGYVQNSD 403
Score = 109 bits (273), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 142/293 (48%), Gaps = 13/293 (4%)
Query: 303 ESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLT 362
++++ P+ T ++ + + G +H ++R G + AN ++ Y+KCG+L
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 363 STSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL---MRREGPRPNEFAFASVLS 419
+F+ +I +D++SW+++I GYSQ G ++ + L MR + PN + A +
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 420 VCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVS 479
++ G+Q HA V+ + + ++L+ MY K G +++ ++F + +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 480 WTAMINGYAEHGYSQEAI---HLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHY 534
W+ M++GYA G +EAI +LF + G D V F VL++ + V LG H
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHC 245
Query: 535 FNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ + GFV ++ + + L++A M ++ ++ + WS ++
Sbjct: 246 ITIKNGLLGFVALSN---ALVTMYSKCESLNEACKMFDS-SGDRNSITWSAMV 294
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 422 bits (1085), Expect = e-117, Method: Compositional matrix adjust.
Identities = 229/677 (33%), Positives = 370/677 (54%), Gaps = 10/677 (1%)
Query: 34 QLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALA 93
++P + +T N+ + VK+G + AR +FD M R ++WT L+ Y + EA
Sbjct: 73 EMP-HKNTVSTNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFK 131
Query: 94 LFSRVWVEPQMNM-DPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVF--VGSALL 150
LF ++ + D + L C V N +H + VK GF + F V + LL
Sbjct: 132 LFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLL 191
Query: 151 DMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSY 210
Y ++ +++L C +F+E+P ++ V++ +ITG + G E + F +M +S Q +
Sbjct: 192 KSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDF 251
Query: 211 TFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERM 270
TF+ VLKA G+++H + + GF + V N + YSK ++ + LF+ M
Sbjct: 252 TFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEM 311
Query: 271 STRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGE 330
D +S+ +I+SY Q + E + F MQ + FA ++S +ANL+ +Q G
Sbjct: 312 PELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGR 371
Query: 331 QLHAHVLRLGLVDS-LSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQG 389
QLH L L DS L V NS++ MY+KC ++F + +R +SW+ +I GY Q
Sbjct: 372 QLHCQAL-LATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQK 430
Query: 390 GYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIK 449
G + MR R ++ FA+VL + A L GKQ+HA ++ G
Sbjct: 431 GLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSG 490
Query: 450 SALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLR 509
S L++MY+KCGSIK+A Q+F E + VSW A+I+ +A++G + AI F K+ GL+
Sbjct: 491 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQ 550
Query: 510 PDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAEN 569
PDSV+ +GVLTACSH G V+ G YF MS YG P K+HY CM+DLL R GR ++AE
Sbjct: 551 PDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 610
Query: 570 MIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHP-SCAGTHITLANIYAAKG 628
+++ MP + D+++WS++L AC + + + AEK+ + A +++++NIYAA G
Sbjct: 611 LMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAG 670
Query: 629 RWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS--- 685
W + +V+K MR +G+ K P +S ++V ++ F S+D+ H G++I R ++ L +
Sbjct: 671 EWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIE 730
Query: 686 RESDIDDLDSLVHDAED 702
RE D S+V D ++
Sbjct: 731 REGYKPDTSSVVQDVDE 747
Score = 218 bits (554), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/498 (28%), Positives = 234/498 (46%), Gaps = 41/498 (8%)
Query: 135 VKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAG------ 188
+KTGF + +++ + G++ +V+DEMP +N VS +I+G V+ G
Sbjct: 40 IKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSAR 99
Query: 189 -------------------------HNKEGLIYFAEMWRSKE--QGDSYTFAIVLKASAD 221
H E F +M RS D TF +L D
Sbjct: 100 DLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCND 159
Query: 222 SGALNFGREIHTIMLKRGFDVVSF--VANSLATMYSKCGKLDYSLRLFERMSTRDVISWT 279
+ N ++H +K GFD F V+N L Y + +LD + LFE + +D +++
Sbjct: 160 AVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFN 219
Query: 280 TIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRL 339
T+IT Y + G + F++M++S +P+++TF+ ++ A L G+QLHA +
Sbjct: 220 TLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTT 279
Query: 340 GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYL 399
G SV N I+ YSK ++ T ++F M D +S++ +I YSQ E + +
Sbjct: 280 GFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFF 339
Query: 400 ALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKC 459
M+ G F FA++LS+ N++ L+ G+Q+H + + + ++L++MY+KC
Sbjct: 340 REMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKC 399
Query: 460 GSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVL 519
+EA IF VSWTA+I+GY + G + LF K+ LR D TF VL
Sbjct: 400 EMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVL 459
Query: 520 TACSHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQ 577
A + + LG H F + S V S ++D+ + G + DA + E MP
Sbjct: 460 KASASFASLLLGKQLHAFIIRSGNLENVFSGSG---LVDMYAKCGSIKDAVQVFEEMP-D 515
Query: 578 KDDVVWSTLLRACMVQGD 595
++ V W+ L+ A GD
Sbjct: 516 RNAVSWNALISAHADNGD 533
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 231/667 (34%), Positives = 382/667 (57%), Gaps = 16/667 (2%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMT---QRDEISWTTLISGYVKAMDSIEALALFSRVWVE 101
NS + KSG A +F+TM +RD +SW+ +++ Y ++A+ +F ++E
Sbjct: 101 NSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE-FLE 159
Query: 102 PQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTG-FVNSVFVGSALLDMYTK-LGKI 159
+ + + + ++AC+ + V G G+ +KTG F + V VG +L+DM+ K
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSF 219
Query: 160 ELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKAS 219
E +VFD+M NVV+WT +IT ++ G +E + +F +M S + D +T + V A
Sbjct: 220 ENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSAC 279
Query: 220 ADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKC---GKLDYSLRLFERMSTRDVI 276
A+ L+ G+++H+ ++ G +V V SL MY+KC G +D ++F+RM V+
Sbjct: 280 AELENLSLGKQLHSWAIRSG--LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 277 SWTTIITSYVQMGE-EENAFDAFVRM-QESDVKPNEYTFAAIISASANLARIQWGEQLHA 334
SWT +IT Y++ A + F M + V+PN +TF++ A NL+ + G+Q+
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLG 397
Query: 335 HVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEE 394
+ GL + SVANS+++M+ K ++ F + ++++S++T + G + E+
Sbjct: 398 QAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQ 457
Query: 395 AFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALIN 454
AF+ L+ + + F FAS+LS N+ + +G+QIH+ V+ +GL + +ALI+
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 455 MYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVT 514
MYSKCGSI AS++F E+ +++SWT+MI G+A+HG++ + F ++ G++P+ VT
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 515 FMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENM 574
++ +L+ACSH GLV G+ +FN M + + P EHY CM+DLLCRAG L+DA I M
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTM 637
Query: 575 PHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAA 634
P Q D +VW T L AC V + G+ A KILEL P+ +I L+NIYA G+W E+
Sbjct: 638 PFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEEST 697
Query: 635 EVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS---RESDID 691
E+R+ M+ + ++KE G S I+V D++ F D H IY LD L + R +
Sbjct: 698 EMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVP 757
Query: 692 DLDSLVH 698
D D ++H
Sbjct: 758 DTDLVLH 764
Score = 175 bits (443), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/510 (24%), Positives = 243/510 (47%), Gaps = 17/510 (3%)
Query: 88 SIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGS 147
++ AL L +R + P MD S LK+C + G+ +H ++ + +
Sbjct: 45 AVSALDLMARDGIRP---MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYN 101
Query: 148 ALLDMYTKLGKIELGCRVFDEMPL---RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSK 204
+L+ +Y+K G VF+ M R+VVSW+A++ G + + F E
Sbjct: 102 SLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELG 161
Query: 205 EQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG-FDVVSFVANSLATMYSKC-GKLDY 262
+ Y + V++A ++S + GR ++K G F+ V SL M+ K +
Sbjct: 162 LVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFEN 221
Query: 263 SLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASAN 322
+ ++F++MS +V++WT +IT +QMG A F+ M S + +++T +++ SA A
Sbjct: 222 AYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAE 281
Query: 323 LARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKC---GQLTSTSIVFHGMIRRDIISW 379
L + G+QLH+ +R GLVD V S++ MY+KC G + VF M ++SW
Sbjct: 282 LENLSLGKQLHSWAIRSGLVD--DVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSW 339
Query: 380 STIIGGYSQG-GYEEEAFEYLALMRREG-PRPNEFAFASVLSVCGNMAILEQGKQIHAHV 437
+ +I GY + EA + M +G PN F F+S CGN++ GKQ+
Sbjct: 340 TALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA 399
Query: 438 MSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAI 497
GL + + +++I+M+ K +++A + F ++VS+ ++G + ++A
Sbjct: 400 FKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAF 459
Query: 498 HLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDL 557
L ++ L + TF +L+ ++ G + G + + K G ++ +I +
Sbjct: 460 KLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV-KLGLSCNQPVCNALISM 518
Query: 558 LCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ G + D + + N ++ + W++++
Sbjct: 519 YSKCGSI-DTASRVFNFMENRNVISWTSMI 547
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 102/206 (49%), Gaps = 8/206 (3%)
Query: 395 AFEYLALMRREGPRP-NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALI 453
A L LM R+G RP + F+S+L C GK +HA ++ +E +++ ++LI
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 454 NMYSKCGSIKEASQIFYETE---SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRP 510
++YSK G +A +F D+VSW+AM+ Y +G +AI +F + +GL P
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 511 DSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGC-MIDLLCRA-GRLSDAE 568
+ + V+ ACS++ V +G + K G S GC +ID+ + +A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLM-KTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 569 NMIENMPHQKDDVVWSTLLRACMVQG 594
+ + M + + V W+ ++ CM G
Sbjct: 224 KVFDKMS-ELNVVTWTLMITRCMQMG 248
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Query: 31 QGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIE 90
Q +L + + P N+ + K G + A ++F+ M R+ ISWT++I+G+ K +I
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIR 558
Query: 91 ALALFSRVWVEPQMNMDPFILSLALKACA 119
L F+++ +E + + L AC+
Sbjct: 559 VLETFNQM-IEEGVKPNEVTYVAILSACS 586
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 219/648 (33%), Positives = 361/648 (55%), Gaps = 12/648 (1%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACA 119
AR FD + RD +W +ISGY +A +S E + FS + + D LKAC
Sbjct: 105 ARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR 164
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
++ G +H +K GF+ V+V ++L+ +Y++ + +FDEMP+R++ SW A
Sbjct: 165 TVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNA 221
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
+I+G ++G+ KE L + DS T +L A ++G N G IH+ +K G
Sbjct: 222 MISGYCQSGNAKEALT----LSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
+ FV+N L +Y++ G+L ++F+RM RD+ISW +II +Y + A F
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLG-LVDSLSVANSIMAMYSKC 358
M+ S ++P+ T ++ S + L I+ + LR G ++ +++ N+++ MY+K
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 359 GQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGP-RPNEFAFASV 417
G + S VF+ + D+ISW+TII GY+Q G+ EA E +M EG N+ + SV
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSV 457
Query: 418 LSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDI 477
L C L QG ++H ++ GL + ++L +MY KCG +++A +FY+ +
Sbjct: 458 LPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS 517
Query: 478 VSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNL 537
V W +I + HG+ ++A+ LF+++ G++PD +TF+ +L+ACSH+GLVD G F +
Sbjct: 518 VPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEM 577
Query: 538 MSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVN 597
M YG PS +HYGCM+D+ RAG+L A I++M Q D +W LL AC V G+V+
Sbjct: 578 MQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVD 637
Query: 598 CGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVK 657
G+ +E + E+ P G H+ L+N+YA+ G+W E+R + KG+ K PGWS ++V
Sbjct: 638 LGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVD 697
Query: 658 DQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI---DDLDSLVHDAED 702
++V F + ++ H E++YR L L ++ I D ++ D ED
Sbjct: 698 NKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVED 745
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 226/454 (49%), Gaps = 13/454 (2%)
Query: 59 DARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKAC 118
+AR +FD M RD SW +ISGY ++ ++ EAL L + + MD + L AC
Sbjct: 203 NARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL-----RAMDSVTVVSLLSAC 257
Query: 119 ALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWT 178
+ N G ++H Y++K G + +FV + L+D+Y + G++ +VFD M +R+++SW
Sbjct: 258 TEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWN 317
Query: 179 AIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKR 238
+II + F EM S+ Q D T + + G + R + L++
Sbjct: 318 SIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRK 377
Query: 239 GFDVVSF-VANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDA 297
G+ + + N++ MY+K G +D + +F + DVISW TII+ Y Q G A +
Sbjct: 378 GWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEM 437
Query: 298 FVRM-QESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYS 356
+ M +E ++ N+ T+ +++ A + ++ G +LH +L+ GL + V S+ MY
Sbjct: 438 YNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYG 497
Query: 357 KCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFAS 416
KCG+L +F+ + R + + W+T+I + G+ E+A M EG +P+ F +
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVT 557
Query: 417 VLSVCGNMAILEQGKQIHAHVMS-IGLERTAMIKSALINMYSKCGSIKEASQIFYETE-S 474
+LS C + ++++G+ + + G+ + +++MY + G ++ A +
Sbjct: 558 LLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQ 617
Query: 475 DDIVSWTAMINGYAEHGYSQ----EAIHLFEKVP 504
D W A+++ HG + HLFE P
Sbjct: 618 PDASIWGALLSACRVHGNVDLGKIASEHLFEVEP 651
Score = 184 bits (467), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 228/471 (48%), Gaps = 13/471 (2%)
Query: 123 NVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIIT 182
N+ + LH V + + +V + + L+++Y LG + L FD + R+V +W +I+
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLMIS 125
Query: 183 GLVRAGHNKEGLIYFAE-MWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFD 241
G RAG++ E + F+ M S D TF VLKA + G +IH + LK GF
Sbjct: 126 GYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR---TVIDGNKIHCLALKFGFM 182
Query: 242 VVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM 301
+VA SL +YS+ + + LF+ M RD+ SW +I+ Y Q G + A +
Sbjct: 183 WDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLSNGL 242
Query: 302 QESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQL 361
+ D T +++SA G +H++ ++ GL L V+N ++ +Y++ G+L
Sbjct: 243 RAMD----SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRL 298
Query: 362 TSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVC 421
VF M RD+ISW++II Y A MR +P+ S+ S+
Sbjct: 299 RDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASIL 358
Query: 422 GNMAILEQGKQIHAHVMSIG-LERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSW 480
+ + + + + G I +A++ MY+K G + A +F + D++SW
Sbjct: 359 SQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISW 418
Query: 481 TAMINGYAEHGYSQEAIHLFEKVPMVG-LRPDSVTFMGVLTACSHAGLVDLGFHYFNLMS 539
+I+GYA++G++ EAI ++ + G + + T++ VL ACS AG + G +
Sbjct: 419 NTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLL 478
Query: 540 DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRAC 590
K G + D+ + GRL DA ++ +P + + V W+TL+ AC
Sbjct: 479 -KNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVNSVPWNTLI-AC 526
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 126/478 (26%), Positives = 212/478 (44%), Gaps = 59/478 (12%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G L D +K+FD M RD ISW ++I Y + A++LF + + + P L+L
Sbjct: 296 GRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLS---RIQPDCLTLI 352
Query: 115 LKACALNV--NVNYGESLHGYTVKTG-FVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
A L+ ++ S+ G+T++ G F+ + +G+A++ MY KLG ++ VF+ +P
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFGRE 230
+V+SW II+G + G E + + M E + T+ VL A + +GAL G +
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 231 IHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGE 290
+H +LK G + FV SLA MY KCG+L+ +L LF ++ + + W T+I + G
Sbjct: 473 LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGH 532
Query: 291 EENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHV-LRLGLVDSLSVAN 349
E A F M + VKP+ TF ++SA ++ + G+ + G+ SL
Sbjct: 533 GEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYG 592
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
++ MY + GQL E A +++ M + P
Sbjct: 593 CMVDMYGRAGQL-------------------------------ETALKFIKSMSLQ---P 618
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGS---IKEAS 466
+ + ++LS C ++ GK H+ + E L NMY+ G + E
Sbjct: 619 DASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGY-HVLLSNMYASAGKWEGVDEIR 677
Query: 467 QIFYETESDDIVSWTAM-INGYAEHGYSQEAIH------------LFEKVPMVGLRPD 511
I + W++M ++ E Y+ H L K+ M+G PD
Sbjct: 678 SIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD 735
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K G + AR +F+ + D ISW T+ISGY + + EA+ +++ + E ++ +
Sbjct: 396 KLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
L AC+ + G LHG +K G VFV ++L DMY K G++E +F ++P
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRV 515
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
N V W +I GH ++ ++ F EM + D TF +L A + SG ++ G+
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 233 TIMLKRGFDVVSFVAN--SLATMYSKCGKLDYSLRLFERMSTR-DVISWTTIITS 284
M++ + + + + + MY + G+L+ +L+ + MS + D W ++++
Sbjct: 576 E-MMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 111/276 (40%), Gaps = 52/276 (18%)
Query: 416 SVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESD 475
++ C N L+ K +HA ++ + I + L+N+Y G++ A F ++
Sbjct: 59 TLFRYCTN---LQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 476 DIVSWTAMINGYAEHGYSQEAIHLFEKVPM-VGLRPDSVTFMGVLTACS--------HAG 526
D+ +W MI+GY G S E I F + GL PD TF VL AC H
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 527 LVDLGFHY--------FNLMSDKYGFV----------PSKE--HYGCMIDLLCRAGRLSD 566
+ GF + +L S +Y V P ++ + MI C++G +
Sbjct: 176 ALKFGFMWDVYVAASLIHLYS-RYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKE 234
Query: 567 AENMIENMPHQKDDVVWSTLLRACMVQGDVNCG--------RHTAEKILELHPSCAGTHI 618
A + N D V +LL AC GD N G +H E L +
Sbjct: 235 ALTL-SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNK------ 287
Query: 619 TLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRI 654
L ++YA GR R+ +V M + +I W+ I
Sbjct: 288 -LIDLYAEFGRLRDCQKVFDRMYVRDLIS---WNSI 319
>sp|Q84MA3|PP345_ARATH Pentatricopeptide repeat-containing protein At4g32430,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2
SV=1
Length = 763
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/641 (34%), Positives = 363/641 (56%), Gaps = 20/641 (3%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K+G +A +F+ + D +SW T++SG+ D+ AL R+ + D F S
Sbjct: 123 KAGRFDNALCIFENLVDPDVVSWNTILSGFD---DNQIALNFVVRM-KSAGVVFDAFTYS 178
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
AL C + G L VKTG + + VG++ + MY++ G RVFDEM +
Sbjct: 179 TALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK 238
Query: 173 NVVSWTAIITGLVRAG-HNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
+++SW ++++GL + G E ++ F +M R + D +F V+ L R+I
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQI 298
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
H + +KRG++ + V N L + YSKCG L+ +F +MS R+V+SWTT+I+S +
Sbjct: 299 HGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NK 353
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
++A F+ M+ V PNE TF +I+A +I+ G ++H ++ G V SV NS
Sbjct: 354 DDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSF 413
Query: 352 MAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNE 411
+ +Y+K L F + R+IISW+ +I G++Q G+ EA + E PNE
Sbjct: 414 ITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE-TMPNE 472
Query: 412 FAFASVLSVCG---NMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
+ F SVL+ ++++ +QG++ HAH++ +GL ++ SAL++MY+K G+I E+ ++
Sbjct: 473 YTFGSVLNAIAFAEDISV-KQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKV 531
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F E + WT++I+ Y+ HG + ++LF K+ + PD VTF+ VLTAC+ G+V
Sbjct: 532 FNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMV 591
Query: 529 DLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLR 588
D G+ FN+M + Y PS EHY CM+D+L RAGRL +AE ++ +P + + ++L
Sbjct: 592 DKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLG 651
Query: 589 ACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKE 648
+C + G+V G AE +E+ P +G+++ + NIYA K W +AAE+RK MR K V KE
Sbjct: 652 SCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKE 711
Query: 649 PGWSRIKVKD-----QVSAFVSSDRRHSQGEDIYRMLDLLA 684
G+S I V D + F S D+ H + ++IYRM++++
Sbjct: 712 AGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIG 752
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 160/606 (26%), Positives = 293/606 (48%), Gaps = 56/606 (9%)
Query: 60 ARKMFDTMTQRD-EISWTTLISGYVKAMDSIEALALFSRVWVEPQM-----NMDPFILSL 113
A K+FD +QR+ S IS ++ AL++F Q+ +MD L L
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKE---NLQLGYFGRHMDEVTLCL 83
Query: 114 ALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRN 173
ALKAC ++ G +HG++ +GF + V V +A++ MY K G+ + +F+ + +
Sbjct: 84 ALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPD 141
Query: 174 VVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
VVSW I++G N+ L + M + D++T++ L S G ++ +
Sbjct: 142 VVSWNTILSGF---DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQS 198
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
++K G + V NS TMYS+ G + R+F+ MS +D+ISW ++++ Q G
Sbjct: 199 TVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEG--TF 256
Query: 294 AFDA---FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANS 350
F+A F M V+ + +F ++I+ + ++ Q+H ++ G L V N
Sbjct: 257 GFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNI 316
Query: 351 IMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPN 410
+M+ YSKCG L + VFH M R+++SW+T+I +++A MR +G PN
Sbjct: 317 LMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMI-----SSNKDDAVSIFLNMRFDGVYPN 371
Query: 411 EFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFY 470
E F +++ +++G +IH + G + ++ I +Y+K ++++A + F
Sbjct: 372 EVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFE 431
Query: 471 ETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACS------- 523
+ +I+SW AMI+G+A++G+S EA+ +F + P+ TF VL A +
Sbjct: 432 DITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISV 490
Query: 524 ------HAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQ 577
HA L+ LG + ++S ++D+ + G + ++E + M Q
Sbjct: 491 KQGQRCHAHLLKLGLNSCPVVSS------------ALLDMYAKRGNIDESEKVFNEMS-Q 537
Query: 578 KDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAA---KGRWREAA 634
K+ VW++++ A GD + K+++ + A +T ++ A KG +
Sbjct: 538 KNQFVWTSIISAYSSHGDFETVMNLFHKMIK--ENVAPDLVTFLSVLTACNRKGMVDKGY 595
Query: 635 EVRKMM 640
E+ MM
Sbjct: 596 EIFNMM 601
Score = 195 bits (496), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 124/431 (28%), Positives = 222/431 (51%), Gaps = 11/431 (2%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVK-AMDSIEALALFSRVWVEPQ 103
NS + +SG AR++FD M+ +D ISW +L+SG + EA+ +F R +
Sbjct: 213 NSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF-RDMMREG 271
Query: 104 MNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGC 163
+ +D + + C ++ +HG +K G+ + + VG+ L+ Y+K G +E
Sbjct: 272 VELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVK 331
Query: 164 RVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSG 223
VF +M RNVVSWT +I+ + + + F M + TF ++ A +
Sbjct: 332 SVFHQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE 386
Query: 224 ALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIIT 283
+ G +IH + +K GF V NS T+Y+K L+ + + FE ++ R++ISW +I+
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 284 SYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARI--QWGEQLHAHVLRLGL 341
+ Q G A F+ ++ PNEYTF ++++A A I + G++ HAH+L+LGL
Sbjct: 447 GFAQNGFSHEALKMFLS-AAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGL 505
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
V+++++ MY+K G + + VF+ M +++ W++II YS G E
Sbjct: 506 NSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHK 565
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSI-GLERTAMIKSALINMYSKCG 460
M +E P+ F SVL+ C ++++G +I ++ + LE + S +++M + G
Sbjct: 566 MIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAG 625
Query: 461 SIKEASQIFYE 471
+KEA ++ E
Sbjct: 626 RLKEAEELMSE 636
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 3/224 (1%)
Query: 17 SAIACTER-RPLLLFQGTQLPV-YVSTPEV-NSQLKHLVKSGYLHDARKMFDTMTQRDEI 73
+A+ C E+ + L G + +VS P V NS + K L DA+K F+ +T R+ I
Sbjct: 380 NAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREII 439
Query: 74 SWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGY 133
SW +ISG+ + S EAL +F E N F L A A +++V G+ H +
Sbjct: 440 SWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAH 499
Query: 134 TVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEG 193
+K G + V SALLDMY K G I+ +VF+EM +N WT+II+ G +
Sbjct: 500 LLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETV 559
Query: 194 LIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLK 237
+ F +M + D TF VL A G ++ G EI +M++
Sbjct: 560 MNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIE 603
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/635 (32%), Positives = 354/635 (55%), Gaps = 5/635 (0%)
Query: 51 LVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFI 110
+ G + +A ++F+ + + + + T++ G+ K D +AL F R+ + +++P +
Sbjct: 79 FCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYD---DVEPVV 135
Query: 111 LSLA--LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDE 168
+ LK C + G+ +HG VK+GF +F + L +MY K ++ +VFD
Sbjct: 136 YNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDR 195
Query: 169 MPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFG 228
MP R++VSW I+ G + G + L M + T VL A + ++ G
Sbjct: 196 MPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVG 255
Query: 229 REIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
+EIH ++ GFD + ++ +L MY+KCG L+ + +LF+ M R+V+SW ++I +YVQ
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQN 315
Query: 289 GEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVA 348
+ A F +M + VKP + + + A A+L ++ G +H + LGL ++SV
Sbjct: 316 ENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVV 375
Query: 349 NSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPR 408
NS+++MY KC ++ + + +F + R ++SW+ +I G++Q G +A Y + MR +
Sbjct: 376 NSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK 435
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
P+ F + SV++ ++I K IH VM L++ + +AL++MY+KCG+I A I
Sbjct: 436 PDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLI 495
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F + +W AMI+GY HG+ + A+ LFE++ ++P+ VTF+ V++ACSH+GLV
Sbjct: 496 FDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLV 555
Query: 529 DLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLR 588
+ G F +M + Y S +HYG M+DLL RAGRL++A + I MP + V+ +L
Sbjct: 556 EAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLG 615
Query: 589 ACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKE 648
AC + +VN AE++ EL+P G H+ LANIY A W + +VR M +G+ K
Sbjct: 616 ACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT 675
Query: 649 PGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLL 683
PG S +++K++V +F S H + IY L+ L
Sbjct: 676 PGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKL 710
Score = 238 bits (606), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 126/456 (27%), Positives = 241/456 (52%), Gaps = 10/456 (2%)
Query: 136 KTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLI 195
K G F + L+ ++ + G ++ RVF+ + + V + ++ G + + L
Sbjct: 62 KNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKALQ 121
Query: 196 YFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYS 255
+F M + Y F +LK D L G+EIH +++K GF + F L MY+
Sbjct: 122 FFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYA 181
Query: 256 KCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAA 315
KC +++ + ++F+RM RD++SW TI+ Y Q G A + M E ++KP+ T +
Sbjct: 182 KCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVS 241
Query: 316 IISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRD 375
++ A + L I G+++H + +R G ++++ +++ MY+KCG L + +F GM+ R+
Sbjct: 242 VLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERN 301
Query: 376 IISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHA 435
++SW+++I Y Q +EA M EG +P + + L C ++ LE+G+ IH
Sbjct: 302 VVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHK 361
Query: 436 HVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQE 495
+ +GL+R + ++LI+MY KC + A+ +F + +S +VSW AMI G+A++G +
Sbjct: 362 LSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPID 421
Query: 496 AIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHYFNLMS--DKYGFVPSKEHY 551
A++ F ++ ++PD+ T++ V+TA + + H + S DK FV +
Sbjct: 422 ALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTT---- 477
Query: 552 GCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
++D+ + G + A +I +M ++ W+ ++
Sbjct: 478 -ALVDMYAKCGAIMIAR-LIFDMMSERHVTTWNAMI 511
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 190/359 (52%), Gaps = 2/359 (0%)
Query: 229 REIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
R+I ++ K G F L +++ + G +D + R+FE + ++ + + T++ + ++
Sbjct: 54 RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKV 113
Query: 289 GEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVA 348
+ + A FVRM+ DV+P Y F ++ + A ++ G+++H +++ G L
Sbjct: 114 SDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAM 173
Query: 349 NSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPR 408
+ MY+KC Q+ VF M RD++SW+TI+ GYSQ G A E + M E +
Sbjct: 174 TGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLK 233
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
P+ SVL + ++ GK+IH + M G + I +AL++MY+KCGS++ A Q+
Sbjct: 234 PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQL 293
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F ++VSW +MI+ Y ++ +EA+ +F+K+ G++P V+ MG L AC+ G +
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 529 DLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ G + + +S + G + +I + C+ + A +M + + V W+ ++
Sbjct: 354 ERG-RFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL-QSRTLVSWNAMI 410
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 10 VGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQ 69
+G L A + + ER + +L + + VNS + K + A MF +
Sbjct: 341 MGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQS 400
Query: 70 RDEISWTTLISGYVKAMDSIEALALFSRV---WVEPQMNMDPFILSLALKACALNVNVNY 126
R +SW +I G+ + I+AL FS++ V+P D F + A A ++
Sbjct: 401 RTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKP----DTFTYVSVITAIAELSITHH 456
Query: 127 GESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVR 186
+ +HG +++ +VFV +AL+DMY K G I + +FD M R+V +W A+I G
Sbjct: 457 AKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGT 516
Query: 187 AGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIM 235
G K L F EM + + + TF V+ A + SG + G + +M
Sbjct: 517 HGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMM 565
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 79/161 (49%), Gaps = 2/161 (1%)
Query: 427 LEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMING 486
L++ +QI V GL + ++ L++++ + GS+ EA+++F +S V + M+ G
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 487 YAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVP 546
+A+ +A+ F ++ + P F +L C + +G L+ K GF
Sbjct: 110 FAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV-KSGFSL 168
Query: 547 SKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ ++ + ++++A + + MP ++D V W+T++
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIV 208
>sp|Q9LU94|PP255_ARATH Putative pentatricopeptide repeat-containing protein At3g25970
OS=Arabidopsis thaliana GN=PCMP-E46 PE=3 SV=2
Length = 701
Score = 407 bits (1045), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/676 (34%), Positives = 375/676 (55%), Gaps = 17/676 (2%)
Query: 32 GTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEA 91
G+ +YVS N L +K G+L A +FD M +RD +SW T+ISGY +A
Sbjct: 30 GSISDIYVS----NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDA 85
Query: 92 LALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLD 151
LF+ + ++D + S LK A + GE +HG +K G+ +V+VGS+L+D
Sbjct: 86 WCLFTCM-KRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVD 144
Query: 152 MYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEG--LIYFAEMWRSKEQGDS 209
MY K ++E F E+ N VSW A+I G V+ K L+ EM ++ D+
Sbjct: 145 MYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEM-KAAVTMDA 203
Query: 210 YTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFER 269
TFA +L D N +++H +LK G + N++ + Y+ CG + + R+F+
Sbjct: 204 GTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDG 263
Query: 270 MS-TRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQW 328
+ ++D+ISW ++I + + +E+AF+ F++MQ V+ + YT+ ++SA + +
Sbjct: 264 LGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF 323
Query: 329 GEQLHAHVLRLGLVDSLSVANSIMAMYSK--CGQLTSTSIVFHGMIRRDIISWSTIIGGY 386
G+ LH V++ GL S N++++MY + G + +F + +D+ISW++II G+
Sbjct: 324 GKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGF 383
Query: 387 SQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTA 446
+Q G E+A ++ + +R + +++AF+++L C ++A L+ G+QIHA G
Sbjct: 384 AQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNE 443
Query: 447 MIKSALINMYSKCGSIKEASQIFYETESD-DIVSWTAMINGYAEHGYSQEAIHLFEKVPM 505
+ S+LI MYSKCG I+ A + F + S V+W AMI GYA+HG Q ++ LF ++
Sbjct: 444 FVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCN 503
Query: 506 VGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLS 565
++ D VTF +LTACSH GL+ G NLM Y P EHY +DLL RAG ++
Sbjct: 504 QNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVN 563
Query: 566 DAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYA 625
A+ +IE+MP D +V T L C G++ A +LE+ P T+++L+++Y+
Sbjct: 564 KAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYS 623
Query: 626 AKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS 685
+W E A V+KMM+ +GV K PGWS I++++QV AF + DR + +DIY M+ L
Sbjct: 624 DLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQ 683
Query: 686 RESDID-----DLDSL 696
+D D DSL
Sbjct: 684 EMQWLDSDNGVDADSL 699
Score = 239 bits (609), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/461 (28%), Positives = 248/461 (53%), Gaps = 5/461 (1%)
Query: 131 HGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHN 190
H Y +K G ++ ++V + +LD Y K G + +FDEMP R+ VSW +I+G G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 191 KEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSL 250
++ F M RS D Y+F+ +LK A + G ++H +++K G++ +V +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 251 ATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQ-ESDVKPN 309
MY+KC +++ + F+ +S + +SW +I +VQ+ + + AF M+ ++ V +
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 310 EYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFH 369
TFA +++ + +Q+HA VL+LGL +++ N++++ Y+ CG ++ VF
Sbjct: 203 AGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFD 262
Query: 370 GM-IRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILE 428
G+ +D+ISW+++I G+S+ +E AFE M+R + + + +LS C
Sbjct: 263 GLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQI 322
Query: 429 QGKQIHAHVMSIGLERTAMIKSALINMYSK--CGSIKEASQIFYETESDDIVSWTAMING 486
GK +H V+ GLE+ +ALI+MY + G++++A +F +S D++SW ++I G
Sbjct: 323 FGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITG 382
Query: 487 YAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVP 546
+A+ G S++A+ F + ++ D F +L +CS + LG + ++ K GFV
Sbjct: 383 FAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLG-QQIHALATKSGFVS 441
Query: 547 SKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
++ +I + + G + A + + + V W+ ++
Sbjct: 442 NEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMI 482
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 406 bits (1044), Expect = e-112, Method: Compositional matrix adjust.
Identities = 231/685 (33%), Positives = 356/685 (51%), Gaps = 64/685 (9%)
Query: 75 WTTLISGYVKAMDSIEALALF----SRVWVEPQMNMDPFILSLALKACALNVNVNYGESL 130
W +LI Y + + L LF S W D + KAC +V GES
Sbjct: 95 WNSLIRSYGDNGCANKCLYLFGLMHSLSWTP-----DNYTFPFVFKACGEISSVRCGESA 149
Query: 131 HGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHN 190
H ++ TGF+++VFVG+AL+ MY++ + +VFDEM + +VVSW +II + G
Sbjct: 150 HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKP 209
Query: 191 KEGLIYFAEMWRSKEQG---DSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
K L F+ M + E G D+ T VL A G + G+++H + FV
Sbjct: 210 KVALEMFSRM--TNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 248 NSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQE---- 303
N L MY+KCG +D + +F MS +DV+SW ++ Y Q+G E+A F +MQE
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 304 -------------------------------SDVKPNEYTFAAIISASANLARIQWGEQL 332
S +KPNE T +++S A++ + G+++
Sbjct: 328 MDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEI 387
Query: 333 HAHVLRL-------GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMI--RRDIISWSTII 383
H + ++ G D V N ++ MY+KC ++ + +F + RD+++W+ +I
Sbjct: 388 HCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMI 447
Query: 384 GGYSQGGYEEEAFEYLALMRREG--PRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIG 441
GGYSQ G +A E L+ M E RPN F + L C ++A L GKQIHA+ +
Sbjct: 448 GGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ 507
Query: 442 LERTAM-IKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLF 500
+ + + LI+MY+KCGSI +A +F + + V+WT+++ GY HGY +EA+ +F
Sbjct: 508 QNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIF 567
Query: 501 EKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCR 560
+++ +G + D VT + VL ACSH+G++D G YFN M +G P EHY C++DLL R
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGR 627
Query: 561 AGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITL 620
AGRL+ A +IE MP + VVW L C + G V G + AEKI EL + G++ L
Sbjct: 628 AGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLL 687
Query: 621 ANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRML 680
+N+YA GRW++ +R +MR KGV K PG S ++ + F D+ H ++IY++L
Sbjct: 688 SNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVL 747
Query: 681 DLLASRESDI---DDLDSLVHDAED 702
R DI + +HD +D
Sbjct: 748 LDHMQRIKDIGYVPETGFALHDVDD 772
Score = 219 bits (558), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 142/495 (28%), Positives = 234/495 (47%), Gaps = 60/495 (12%)
Query: 147 SALLDMYTKLGKIELGCRVFDEMPLRN--VVSWTAIITGLVRAGHNKEGLIYFAEMWRSK 204
S L+ Y +G + + P + V W ++I G + L F M
Sbjct: 63 SHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLS 122
Query: 205 EQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSL 264
D+YTF V KA + ++ G H + L GF FV N+L MYS+C L +
Sbjct: 123 WTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDAR 182
Query: 265 RLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM-QESDVKPNEYTFAAIISASANL 323
++F+ MS DV+SW +II SY ++G+ + A + F RM E +P+ T ++ A+L
Sbjct: 183 KVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASL 242
Query: 324 ARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTII 383
G+QLH + ++ ++ V N ++ MY+KCG + + VF M +D++SW+ ++
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMV 302
Query: 384 GGYSQ------------------------------GGYEEEAFEYLAL-----MRREGPR 408
GYSQ GY + Y AL M G +
Sbjct: 303 AGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVM--SIGLERTA-----MIKSALINMYSKCGS 461
PNE SVLS C ++ L GK+IH + + I L + M+ + LI+MY+KC
Sbjct: 363 PNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKK 422
Query: 462 IKEASQIF--YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKV--PMVGLRPDSVTFMG 517
+ A +F + D+V+WT MI GY++HG + +A+ L ++ RP++ T
Sbjct: 423 VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISC 482
Query: 518 VLTACSHAGLVDLG--FHYFNLMSDKYG---FVPSKEHYGCMIDLLCRAGRLSDAENMIE 572
L AC+ + +G H + L + + FV + C+ID+ + G +SDA + +
Sbjct: 483 ALVACASLAALRIGKQIHAYALRNQQNAVPLFVSN-----CLIDMYAKCGSISDARLVFD 537
Query: 573 NMPHQKDDVVWSTLL 587
NM K++V W++L+
Sbjct: 538 NM-MAKNEVTWTSLM 551
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 142/496 (28%), Positives = 239/496 (48%), Gaps = 49/496 (9%)
Query: 57 LHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALK 116
L DARK+FD M+ D +SW ++I Y K AL +FSR+ E D L L
Sbjct: 178 LSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLP 237
Query: 117 ACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVS 176
CA + G+ LH + V + + ++FVG+ L+DMY K G ++ VF M +++VVS
Sbjct: 238 PCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVS 297
Query: 177 WTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAI---------------------- 214
W A++ G + G ++ + F +M K + D T++
Sbjct: 298 WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQML 357
Query: 215 -------------VLKASADSGALNFGREIHTIMLKRGFDV-------VSFVANSLATMY 254
VL A GAL G+EIH +K D+ + V N L MY
Sbjct: 358 SSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMY 417
Query: 255 SKCGKLDYSLRLFERMST--RDVISWTTIITSYVQMGEEENAFDAFVRMQESD--VKPNE 310
+KC K+D + +F+ +S RDV++WT +I Y Q G+ A + M E D +PN
Sbjct: 418 AKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 311 YTFAAIISASANLARIQWGEQLHAHVLR-LGLVDSLSVANSIMAMYSKCGQLTSTSIVFH 369
+T + + A A+LA ++ G+Q+HA+ LR L V+N ++ MY+KCG ++ +VF
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 370 GMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQ 429
M+ ++ ++W++++ GY GY EEA MRR G + + VL C + +++Q
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 430 GKQIHAHVMSI-GLERTAMIKSALINMYSKCGSIKEASQIFYETESD-DIVSWTAMINGY 487
G + + ++ G+ + L+++ + G + A ++ E + V W A ++
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 488 AEHGYSQEAIHLFEKV 503
HG + + EK+
Sbjct: 658 RIHGKVELGEYAAEKI 673
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 154/352 (43%), Gaps = 55/352 (15%)
Query: 32 GTQLPVYVSTPEV-------NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVK 84
G QL + T E+ N + K G + +A +F M+ +D +SW +++GY +
Sbjct: 248 GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQ 307
Query: 85 AMDSIEALALFSRVWVEPQMNMDPFILSLA------------------------------ 114
+A+ LF ++ E ++ MD S A
Sbjct: 308 IGRFEDAVRLFEKMQ-EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEV 366
Query: 115 -----LKACALNVNVNYGESLHGYTV-------KTGFVNSVFVGSALLDMYTKLGKIELG 162
L CA + +G+ +H Y + K G + V + L+DMY K K++
Sbjct: 367 TLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTA 426
Query: 163 CRVFDEMPL--RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQ--GDSYTFAIVLKA 218
+FD + R+VV+WT +I G + G + L +EM+ Q +++T + L A
Sbjct: 427 RAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVA 486
Query: 219 SADSGALNFGREIHTIMLKRGFDVVS-FVANSLATMYSKCGKLDYSLRLFERMSTRDVIS 277
A AL G++IH L+ + V FV+N L MY+KCG + + +F+ M ++ ++
Sbjct: 487 CASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVT 546
Query: 278 WTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWG 329
WT+++T Y G E A F M+ K + T ++ A ++ I G
Sbjct: 547 WTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQG 598
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 132/260 (50%), Gaps = 15/260 (5%)
Query: 44 VNSQLKHLVKSGYLHDARKMFDTMT--QRDEISWTTLISGYVKAMDSIEALALFSRVWVE 101
+N + K + AR MFD+++ +RD ++WT +I GY + D+ +AL L S ++ E
Sbjct: 410 INQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEE 469
Query: 102 P-QMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSV--FVGSALLDMYTKLGK 158
Q + F +S AL ACA + G+ +H Y ++ N+V FV + L+DMY K G
Sbjct: 470 DCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQ-QNAVPLFVSNCLIDMYAKCGS 528
Query: 159 IELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKA 218
I VFD M +N V+WT+++TG G+ +E L F EM R + D T +VL A
Sbjct: 529 ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYA 588
Query: 219 SADSGALNFGREIHTIMLKRGFDVVSFVAN--SLATMYSKCGKLDYSLRLFERMSTR-DV 275
+ SG ++ G E M K F V + L + + G+L+ +LRL E M
Sbjct: 589 CSHSGMIDQGMEYFNRM-KTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPP 647
Query: 276 ISWTTIIT-----SYVQMGE 290
+ W ++ V++GE
Sbjct: 648 VVWVAFLSCCRIHGKVELGE 667
Score = 112 bits (281), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 150/329 (45%), Gaps = 29/329 (8%)
Query: 332 LHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRD--IISWSTIIGGYSQG 389
+H +L G++ +L++ + +++ Y G L+ + D + W+++I Y
Sbjct: 47 IHQKLLSFGIL-TLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDN 105
Query: 390 GYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIK 449
G + LM P+ + F V CG ++ + G+ HA + G +
Sbjct: 106 GCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVG 165
Query: 450 SALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPM-VGL 508
+AL+ MYS+C S+ +A ++F E D+VSW ++I YA+ G + A+ +F ++ G
Sbjct: 166 NALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGC 225
Query: 509 RPDSVTFMGVLTACSHAGLVDLG--FHYFNLMSD--KYGFVPSKEHYGCMIDLLCRAGRL 564
RPD++T + VL C+ G LG H F + S+ + FV + C++D+ + G +
Sbjct: 226 RPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN-----CLVDMYAKCGMM 280
Query: 565 SDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANI- 623
+A + NM KD V W+ MV G GR E + L I + +
Sbjct: 281 DEANTVFSNMS-VKDVVSWNA-----MVAGYSQIGRF--EDAVRLFEKMQEEKIKMDVVT 332
Query: 624 -------YAAKGRWREAAEVRKMMRSKGV 645
YA +G EA V + M S G+
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGI 361
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 31 QGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIE 90
Q +P++VS N + K G + DAR +FD M ++E++WT+L++GY E
Sbjct: 507 QQNAVPLFVS----NCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEE 562
Query: 91 ALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVG---- 146
AL +F + +D L + L AC+ + ++ G Y + V V G
Sbjct: 563 ALGIFDEM-RRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVFGVSPGPEHY 618
Query: 147 SALLDMYTKLGKIELGCRVFDEMPLR-NVVSWTAIIT 182
+ L+D+ + G++ R+ +EMP+ V W A ++
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLS 655
>sp|Q9LFI1|PP280_ARATH Pentatricopeptide repeat-containing protein At3g53360,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2
SV=1
Length = 768
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/682 (32%), Positives = 373/682 (54%), Gaps = 20/682 (2%)
Query: 12 RLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLK-------HLV----KSGYLHDA 60
R + S AC+ R L QG ++ ++ +NS K H++ K G L DA
Sbjct: 68 RTYISLICACSSSRSLA--QGRKIHDHI----LNSNCKYDTILNNHILSMYGKCGSLRDA 121
Query: 61 RKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACAL 120
R++FD M +R+ +S+T++I+GY + EA+ L+ ++ ++ + D F +KACA
Sbjct: 122 REVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKM-LQEDLVPDQFAFGSIIKACAS 180
Query: 121 NVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAI 180
+ +V G+ LH +K + + +AL+ MY + ++ RVF +P+++++SW++I
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 181 ITGLVRAGHNKEGLIYFAEMWR-SKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
I G + G E L + EM + Y F LKA + ++G +IH + +K
Sbjct: 241 IAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSE 300
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
+ SL MY++CG L+ + R+F+++ D SW II G + A F
Sbjct: 301 LAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFS 360
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
+M+ S P+ + +++ A + G Q+H+++++ G + L+V NS++ MY+ C
Sbjct: 361 QMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCS 420
Query: 360 QLTSTSIVFHGMIRR-DIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVL 418
L +F D +SW+TI+ Q E LM P+ ++L
Sbjct: 421 DLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLL 480
Query: 419 SVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIV 478
C ++ L+ G Q+H + + GL IK+ LI+MY+KCGS+ +A +IF ++ D+V
Sbjct: 481 RGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNRDVV 540
Query: 479 SWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLM 538
SW+ +I GYA+ G+ +EA+ LF+++ G+ P+ VTF+GVLTACSH GLV+ G + M
Sbjct: 541 SWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATM 600
Query: 539 SDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNC 598
++G P+KEH C++DLL RAGRL++AE I+ M + D VVW TLL AC QG+V+
Sbjct: 601 QTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHL 660
Query: 599 GRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKD 658
+ AE IL++ P + H+ L +++A+ G W AA +R M+ V K PG S I+++D
Sbjct: 661 AQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIED 720
Query: 659 QVSAFVSSDRRHSQGEDIYRML 680
++ F + D H + +DIY +L
Sbjct: 721 KIHIFFAEDIFHPERDDIYTVL 742
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 156/311 (50%), Gaps = 10/311 (3%)
Query: 282 ITSYVQMGEEENAFDAFVRMQE-SDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLG 340
I S + A +AF Q+ S K T+ ++I A ++ + G ++H H+L
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSN 97
Query: 341 LVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLA 400
+ N I++MY KCG L VF M R+++S++++I GYSQ G EA
Sbjct: 98 CKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYL 157
Query: 401 LMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCG 460
M +E P++FAF S++ C + + + GKQ+HA V+ + + ++ALI MY +
Sbjct: 158 KMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFN 217
Query: 461 SIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAI-HLFEKVPMVGLRPDSVTFMGVL 519
+ +AS++FY D++SW+++I G+++ G+ EA+ HL E + P+ F L
Sbjct: 218 QMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSL 277
Query: 520 TACSHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGC-MIDLLCRAGRLSDAENMIENMPH 576
ACS D G H + S+ G + GC + D+ R G L+ A + + +
Sbjct: 278 KACSSLLRPDYGSQIHGLCIKSELAGNAIA----GCSLCDMYARCGFLNSARRVFDQI-E 332
Query: 577 QKDDVVWSTLL 587
+ D W+ ++
Sbjct: 333 RPDTASWNVII 343
>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein At3g13880
OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
Length = 748
Score = 405 bits (1040), Expect = e-112, Method: Compositional matrix adjust.
Identities = 219/650 (33%), Positives = 363/650 (55%), Gaps = 18/650 (2%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACA 119
AR++FD M +R+ IS+ +LISGY + +A+ LF E + +D F + AL C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAR-EANLKLDKFTYAGALGFCG 159
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
+++ GE LHG V G VF+ + L+DMY+K GK++ +FD R+ VSW +
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASA---DSGALNFGREIHTIML 236
+I+G VR G +E L A+M R +Y VLKA + G + G IH
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 237 KRG--FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGE---- 290
K G FD+V V +L MY+K G L +++LF M +++V+++ +I+ ++QM E
Sbjct: 280 KLGMEFDIV--VRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 291 -EENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
AF F+ MQ ++P+ TF+ ++ A + +++G Q+HA + + + +
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
+++ +Y+ G F ++DI SW+++I + Q E AF+ + RP
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
E+ + ++S C + A L G+QI + + G++ +K++ I+MY+K G++ A+Q+F
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
E ++ D+ +++AMI+ A+HG + EA+++FE + G++P+ F+GVL AC H GLV
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Query: 530 LGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
G YF M + Y P+++H+ C++DLL R GRLSDAEN+I + Q V W LL +
Sbjct: 578 QGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 590 CMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEP 649
C V D G+ AE+++EL P +G+++ L NIY G A EVR++MR +GV KEP
Sbjct: 638 CRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEP 697
Query: 650 GWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDIDDLD-SLVH 698
S I + +Q +F +D H + IY ML+ + ++D +D +LVH
Sbjct: 698 ALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM----DNVDFVDYTLVH 743
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/409 (28%), Positives = 213/409 (52%), Gaps = 8/409 (1%)
Query: 123 NVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIIT 182
+V G+ HG+ +K+ +++ + LL+MY K ++ ++FD MP RN++S+ ++I+
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 183 GLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDV 242
G + G ++ + F E + + D +T+A L + L+ G +H +++ G
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 243 VSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQ 302
F+ N L MYSKCGKLD ++ LF+R RD +SW ++I+ YV++G E + +M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 303 ESDVKPNEYTFAAIISASA---NLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
+ Y +++ A N I+ G +H + +LG+ + V +++ MY+K G
Sbjct: 242 RDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNG 301
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQ-----GGYEEEAFEYLALMRREGPRPNEFAF 414
L +F M +++++++ +I G+ Q EAF+ M+R G P+ F
Sbjct: 302 SLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 415 ASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETES 474
+ VL C LE G+QIHA + + I SALI +Y+ GS ++ Q F T
Sbjct: 362 SVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSK 421
Query: 475 DDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACS 523
DI SWT+MI+ + ++ + A LF ++ +RP+ T +++AC+
Sbjct: 422 QDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACA 470
Score = 203 bits (516), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 224/430 (52%), Gaps = 19/430 (4%)
Query: 176 SWTAIITGLVRAGHNKEGLIYFAEMWRSKEQG-DSYTFAIVLKASADSGALNFGREIHTI 234
S +IT V G+ + + + + K DS + I+ + +A SG++ G+ H
Sbjct: 18 SLVTLITKRVGLGYR-----FLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGH 72
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
M+K + ++ N+L MY KC +L ++ +LF+RM R++IS+ ++I+ Y QMG E A
Sbjct: 73 MIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQA 132
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAM 354
+ F+ +E+++K +++T+A + + GE LH V+ GL + + N ++ M
Sbjct: 133 MELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDM 192
Query: 355 YSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAF 414
YSKCG+L +F RD +SW+++I GY + G EE LA M R+G +A
Sbjct: 193 YSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYAL 252
Query: 415 ASVLSVCG---NMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYE 471
SVL C N +E+G IH + +G+E ++++AL++MY+K GS+KEA ++F
Sbjct: 253 GSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSL 312
Query: 472 TESDDIVSWTAMINGYAEHG-----YSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAG 526
S ++V++ AMI+G+ + S EA LF + GL P TF VL ACS A
Sbjct: 313 MPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK 372
Query: 527 LVDLGFHYFNLMSDKYGFVPSKEHYG-CMIDLLCRAGRLSDAENMIENMPHQKDDVVWST 585
++ G L+ K F S E G +I+L G D + Q D W++
Sbjct: 373 TLEYGRQIHALIC-KNNF-QSDEFIGSALIELYALMGSTEDGMQCFASTSKQ-DIASWTS 429
Query: 586 LLRACMVQGD 595
++ C VQ +
Sbjct: 430 MID-CHVQNE 438
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 222/646 (34%), Positives = 350/646 (54%), Gaps = 3/646 (0%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N+ L V+ G L DA +F M++R+ SW L+ GY K EA+ L+ R+ +
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
D + L+ C ++ G+ +H + V+ G+ + V +AL+ MY K G ++
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
+FD MP R+++SW A+I+G G EGL F M D T V+ A G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 225 LNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITS 284
GR+IH ++ GF V V NSL MY G + +LF RM +D++SWTT+I+
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 285 YVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDS 344
Y + A D + M + VKP+E T AA++SA A L + G +LH ++ L+
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISY 432
Query: 345 LSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRR 404
+ VAN+++ MYSKC + +FH + R+++ISW++II G EA +L M+
Sbjct: 433 VIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQMKM 492
Query: 405 EGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKE 464
+PN + L+ C + L GK+IHAHV+ G+ + +AL++MY +CG +
Sbjct: 493 T-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNT 551
Query: 465 ASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSH 524
A F ++ D+ SW ++ GY+E G + LF+++ +RPD +TF+ +L CS
Sbjct: 552 AWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSK 610
Query: 525 AGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWS 584
+ +V G YF+ M D YG P+ +HY C++DLL RAG L +A I+ MP D VW
Sbjct: 611 SQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWG 669
Query: 585 TLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKG 644
LL AC + ++ G +A+ I EL G +I L N+YA G+WRE A+VR+MM+ G
Sbjct: 670 ALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENG 729
Query: 645 VIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI 690
+ + G S ++VK +V AF+S D+ H Q ++I +L+ + S++
Sbjct: 730 LTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEV 775
Score = 223 bits (569), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 136/450 (30%), Positives = 229/450 (50%), Gaps = 13/450 (2%)
Query: 143 VFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGL-IYFAEMW 201
V +G+A L M+ + G + VF +M RN+ SW ++ G + G+ E + +Y +W
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 202 RSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLD 261
+ D YTF VL+ L G+E+H +++ G+++ V N+L TMY KCG +
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 262 YSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASA 321
+ LF+RM RD+ISW +I+ Y + G + F M+ V P+ T ++ISA
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 322 NLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWST 381
L + G +HA+V+ G +SV NS+ MY G +F M R+DI+SW+T
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 382 IIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIG 441
+I GY ++A + +M ++ +P+E A+VLS C + L+ G ++H +
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 442 LERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFE 501
L ++ + LINMYSKC I +A IF+ +++SWT++I G + EA+
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 502 KVPMVGLRPDSVTFMGVLTACSHAGLVDLG----FHYFNLMSDKYGFVPSKEHYGCMIDL 557
++ M L+P+++T L AC+ G + G H F+P+ ++D+
Sbjct: 489 QMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDM 542
Query: 558 LCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
R GR++ A + + +KD W+ LL
Sbjct: 543 YVRCGRMNTAWSQFNS--QKKDVTSWNILL 570
Score = 204 bits (519), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/467 (29%), Positives = 233/467 (49%), Gaps = 16/467 (3%)
Query: 44 VNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQ 103
VN+ + VK G + AR +FD M +RD ISW +ISGY + E L LF +
Sbjct: 234 VNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF---FAMRG 290
Query: 104 MNMDPFILSLA--LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIEL 161
+++DP +++L + AC L + G +H Y + TGF + V ++L MY G
Sbjct: 291 LSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWRE 350
Query: 162 GCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASAD 221
++F M +++VSWT +I+G + + + M + + D T A VL A A
Sbjct: 351 AEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACAT 410
Query: 222 SGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTI 281
G L+ G E+H + +K VAN+L MYSKC +D +L +F + ++VISWT+I
Sbjct: 411 LGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSI 470
Query: 282 ITSYVQMGEEENAFDA--FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRL 339
I + F+A F+R + ++PN T A ++A A + + G+++HAHVLR
Sbjct: 471 IAG---LRLNNRCFEALIFLRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRT 527
Query: 340 GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYL 399
G+ + N+++ MY +CG++ + F+ ++D+ SW+ ++ GYS+ G E
Sbjct: 528 GVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELF 586
Query: 400 ALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKC 459
M + RP+E F S+L C ++ QG + + G+ + ++++ +
Sbjct: 587 DRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMEDYGVTPNLKHYACVVDLLGRA 646
Query: 460 GSIKEASQIFYETE-SDDIVSWTAMINGYAEHGY----SQEAIHLFE 501
G ++EA + + + D W A++N H A H+FE
Sbjct: 647 GELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
Score = 189 bits (479), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 200/408 (49%), Gaps = 7/408 (1%)
Query: 183 GLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDV 242
GL G +E + M + D F +++ A G ++++I L +
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 243 VSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM- 301
+ N+ M+ + G L + +F +MS R++ SW ++ Y + G + A + RM
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 302 QESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQL 361
VKP+ YTF ++ + + G+++H HV+R G + V N+++ MY KCG +
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDV 247
Query: 362 TSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVC 421
S ++F M RRDIISW+ +I GY + G E E MR P+ SV+S C
Sbjct: 248 KSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISAC 307
Query: 422 GNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWT 481
+ G+ IHA+V++ G + ++L MY GS +EA ++F E DIVSWT
Sbjct: 308 ELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWT 367
Query: 482 AMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHYFNLMS 539
MI+GY + +AI + + ++PD +T VL+AC+ G +D G H + +
Sbjct: 368 TMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 540 DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+V + +I++ + + A ++ N+P +K+ + W++++
Sbjct: 428 RLISYVIVANN---LINMYSKCKCIDKALDIFHNIP-RKNVISWTSII 471
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/347 (21%), Positives = 147/347 (42%), Gaps = 56/347 (16%)
Query: 385 GYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLER 444
G G EEA + L M+ +E F +++ +C E+G ++++ +S
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 445 TAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVP 504
+ +A + M+ + G++ +A +F + ++ SW ++ GYA+ GY EA+ L+ ++
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 505 MV-GLRPDSVTFMGVLTACSHAGLVDLGF-HYFNLMSDKYGFVPSKEHYGCMIDLLCRAG 562
V G++PD TF VL C G+ DL ++ +YG+ + +I + + G
Sbjct: 188 WVGGVKPDVYTFPCVLRTC--GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCG 245
Query: 563 RLSDAENMIENMPHQKDDVVW-----------------------------------STLL 587
+ A + + MP ++D + W ++++
Sbjct: 246 DVKSARLLFDRMP-RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVI 304
Query: 588 RACMVQGDVNCGRHTAEKILELHPSCAGTHITLAN----IYAAKGRWREAAEVRKMMRSK 643
AC + GD GR ++ + I++ N +Y G WREA ++ M K
Sbjct: 305 SACELLGDRRLGRDIHAYVI---TTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERK 361
Query: 644 GVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI 690
++ W+ + +S + + + D YRM+D + + +I
Sbjct: 362 DIV---SWTTM-----ISGY-EYNFLPDKAIDTYRMMDQDSVKPDEI 399
>sp|P0C8Q2|PP323_ARATH Pentatricopeptide repeat-containing protein At4g19191,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E1 PE=2
SV=1
Length = 654
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/617 (34%), Positives = 331/617 (53%), Gaps = 10/617 (1%)
Query: 74 SWTTLISGYVKAMDSIEALALF---SRVWVEPQMNMDPFILSLALKACALNVNVNYGESL 130
+W I V D +E+L LF R EP PF+ KACA +V E +
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVA----KACARLADVGCCEMV 74
Query: 131 HGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHN 190
H + +K+ F + VFVG+A +DM+ K ++ +VF+ MP R+ +W A+++G ++GH
Sbjct: 75 HAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHT 134
Query: 191 KEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSL 250
+ F EM ++ DS T ++++++ +L +H + ++ G DV VAN+
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTW 194
Query: 251 ATMYSKCGKLDYSLRLFERMS--TRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKP 308
+ Y KCG LD + +FE + R V+SW ++ +Y GE +AF + M + KP
Sbjct: 195 ISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKP 254
Query: 309 NEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVF 368
+ TF + ++ N + G +H+H + LG + N+ ++MYSK S ++F
Sbjct: 255 DLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLF 314
Query: 369 HGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILE 428
M R +SW+ +I GY++ G +EA M + G +P+ S++S CG LE
Sbjct: 315 DIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLE 374
Query: 429 QGKQIHAHVMSIGLER-TAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGY 487
GK I A G +R MI +ALI+MYSKCGSI EA IF T +V+WT MI GY
Sbjct: 375 TGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGY 434
Query: 488 AEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPS 547
A +G EA+ LF K+ + +P+ +TF+ VL AC+H+G ++ G+ YF++M Y P
Sbjct: 435 ALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPG 494
Query: 548 KEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKIL 607
+HY CM+DLL R G+L +A +I NM + D +W LL AC + +V AE +
Sbjct: 495 LDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAAESLF 554
Query: 608 ELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSD 667
L P A ++ +ANIYAA G W A +R +M+ + + K PG S I+V + +F +
Sbjct: 555 NLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGE 614
Query: 668 RRHSQGEDIYRMLDLLA 684
H + E IY L+ L+
Sbjct: 615 HGHVENEVIYFTLNGLS 631
Score = 221 bits (563), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/434 (29%), Positives = 222/434 (51%), Gaps = 5/434 (1%)
Query: 164 RVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSG 223
R++ L +V +W I V E L+ F EM R + +++TF V KA A
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLA 66
Query: 224 ALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIIT 283
+ +H ++K F FV + M+ KC +DY+ ++FERM RD +W +++
Sbjct: 67 DVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLS 126
Query: 284 SYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVD 343
+ Q G + AF F M+ +++ P+ T +I +++ ++ E +HA +RLG+
Sbjct: 127 GFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDV 186
Query: 344 SLSVANSIMAMYSKCGQLTSTSIVFHGMIR--RDIISWSTIIGGYSQGGYEEEAFEYLAL 401
++VAN+ ++ Y KCG L S +VF + R R ++SW+++ YS G +AF L
Sbjct: 187 QVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCL 246
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGS 461
M RE +P+ F ++ + C N L QG+ IH+H + +G ++ + I+MYSK
Sbjct: 247 MLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSED 306
Query: 462 IKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTA 521
A +F S VSWT MI+GYAE G EA+ LF + G +PD VT + +++
Sbjct: 307 TCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 522 CSHAGLVDLGFHYFNLMSDKYGFVPSKEHY-GCMIDLLCRAGRLSDAENMIENMPHQKDD 580
C G ++ G + + +D YG +ID+ + G + +A ++ +N P +K
Sbjct: 367 CGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP-EKTV 424
Query: 581 VVWSTLLRACMVQG 594
V W+T++ + G
Sbjct: 425 VTWTTMIAGYALNG 438
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 115/464 (24%), Positives = 219/464 (47%), Gaps = 20/464 (4%)
Query: 37 VYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFS 96
V+V T V+ VK + A K+F+ M +RD +W ++SG+ ++ + +A +LF
Sbjct: 87 VFVGTATVD----MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFR 142
Query: 97 RVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKL 156
+ + ++ D + +++ + ++ E++H ++ G V V + + Y K
Sbjct: 143 EMRLN-EITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKC 201
Query: 157 GKIELGCRVFDEMPL--RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAI 214
G ++ VF+ + R VVSW ++ G + + M R + + D TF
Sbjct: 202 GDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFIN 261
Query: 215 VLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRD 274
+ + + L GR IH+ + G D N+ +MYSK + LF+ M++R
Sbjct: 262 LAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRT 321
Query: 275 VISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHA 334
+SWT +I+ Y + G+ + A F M +S KP+ T ++IS ++ G+ + A
Sbjct: 322 CVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDA 381
Query: 335 HVLRLGLV-DSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEE 393
G D++ + N+++ MYSKCG + +F + +++W+T+I GY+ G
Sbjct: 382 RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFL 441
Query: 394 EAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVM------SIGLERTAM 447
EA + + M +PN F +VL C + LE+G + + H+M S GL+
Sbjct: 442 EALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWE-YFHIMKQVYNISPGLDHY-- 498
Query: 448 IKSALINMYSKCGSIKEASQIFYE-TESDDIVSWTAMINGYAEH 490
S ++++ + G ++EA ++ + D W A++N H
Sbjct: 499 --SCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIH 540
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 21/285 (7%)
Query: 14 FASSAIACTERRPLLLFQGTQL---PVYVSTPE----VNSQLKHLVKSGYLHDARKMFDT 66
F + A +C + P L QG + +++ T + +N+ + KS AR +FD
Sbjct: 259 FINLAASC--QNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDI 316
Query: 67 MTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNY 126
MT R +SWT +ISGY + D EALALF + ++ D L + C ++
Sbjct: 317 MTSRTCVSWTVMISGYAEKGDMDEALALFHAM-IKSGEKPDLVTLLSLISGCGKFGSLET 375
Query: 127 GESLHGYTVKTGFV-NSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLV 185
G+ + G ++V + +AL+DMY+K G I +FD P + VV+WT +I G
Sbjct: 376 GKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYA 435
Query: 186 RAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIM-----LKRGF 240
G E L F++M + + TF VL+A A SG+L G E IM + G
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGL 495
Query: 241 DVVSFVANSLATMYSKCGKLDYSLRLFERMSTR-DVISWTTIITS 284
D S + + L + GKL+ +L L MS + D W ++ +
Sbjct: 496 DHYSCMVDLLG----RKGKLEEALELIRNMSAKPDAGIWGALLNA 536
>sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protein At5g27110
OS=Arabidopsis thaliana GN=PCMP-E14 PE=2 SV=2
Length = 691
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 217/627 (34%), Positives = 342/627 (54%), Gaps = 2/627 (0%)
Query: 60 ARKMFDTMTQRDEIS-WTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKAC 118
AR +F+ R ++ W +L+SGY K + L +F R+ D F +KA
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 119 ALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWT 178
G +H VK+G+V V V S+L+ MY K E +VFDEMP R+V SW
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 179 AIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKR 238
+I+ ++G ++ L F M S + +S + + + A + L G+EIH +K+
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 239 GFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAF 298
GF++ +V ++L MY KC L+ + +F++M + +++W ++I YV G+ ++ +
Sbjct: 238 GFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEIL 297
Query: 299 VRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKC 358
RM +P++ T +I+ A + + G+ +H +V+R + + V S++ +Y KC
Sbjct: 298 NRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKC 357
Query: 359 GQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVL 418
G+ VF + SW+ +I Y G +A E M G +P+ F SVL
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVL 417
Query: 419 SVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIV 478
C +A LE+GKQIH + LE ++ SAL++MYSKCG+ KEA +IF D+V
Sbjct: 418 PACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVV 477
Query: 479 SWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLM 538
SWT MI+ Y HG +EA++ F+++ GL+PD VT + VL+AC HAGL+D G +F+ M
Sbjct: 478 SWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQM 537
Query: 539 SDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV-VWSTLLRACMVQGDVN 597
KYG P EHY CMID+L RAGRL +A +I+ P D+ + STL AC + + +
Sbjct: 538 RSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHS 597
Query: 598 CGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVK 657
G A ++E +P A T++ L N+YA+ W A VR M+ G+ K+PG S I++
Sbjct: 598 LGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Query: 658 DQVSAFVSSDRRHSQGEDIYRMLDLLA 684
D+V F + DR H + E++Y L LL+
Sbjct: 658 DKVCHFFAEDRSHLRAENVYECLALLS 684
Score = 199 bits (506), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/429 (28%), Positives = 224/429 (52%), Gaps = 9/429 (2%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRV---WVEPQMNMDPF 109
K ++ ++FD M +RD SW T+IS + ++ ++ +AL LF R+ EP +
Sbjct: 154 KFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEP----NSV 209
Query: 110 ILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEM 169
L++A+ AC+ + + G+ +H VK GF +V SAL+DMY K +E+ VF +M
Sbjct: 210 SLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKM 269
Query: 170 PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGR 229
P +++V+W ++I G V G +K + M + T +L A + S L G+
Sbjct: 270 PRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGK 329
Query: 230 EIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMG 289
IH +++ + +V SL +Y KCG+ + + +F + SW +I+SY+ +G
Sbjct: 330 FIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVG 389
Query: 290 EEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
A + + +M VKP+ TF +++ A + LA ++ G+Q+H + L + +
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
+++ MYSKCG +F+ + ++D++SW+ +I Y G EA M++ G +P
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKP 509
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMS-IGLERTAMIKSALINMYSKCGSIKEASQI 468
+ +VLS CG+ ++++G + + + S G+E S +I++ + G + EA +I
Sbjct: 510 DGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEI 569
Query: 469 FYET-ESDD 476
+T E+ D
Sbjct: 570 IQQTPETSD 578
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 94/197 (47%), Gaps = 12/197 (6%)
Query: 416 SVLSVCGN-MAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE- 473
S+L C N L + K +H ++++GL R ++ +LIN+Y C A +F +
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDI 67
Query: 474 SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGL-RPDSVTFMGVLTACSHAGLVDLGF 532
D+ W ++++GY+++ + + +F+++ + PDS TF V+ A G LG
Sbjct: 68 RSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGR 127
Query: 533 HYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMV 592
L+ K G+V ++ + + ++ + + MP ++D W+T++ +C
Sbjct: 128 MIHTLVV-KSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMP-ERDVASWNTVI-SCFY 184
Query: 593 QGDVNCGRHTAEKILEL 609
Q AEK LEL
Sbjct: 185 QSG------EAEKALEL 195
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 394 bits (1011), Expect = e-108, Method: Compositional matrix adjust.
Identities = 223/676 (32%), Positives = 359/676 (53%), Gaps = 64/676 (9%)
Query: 35 LPVYVSTPEVNSQLKHLVKSGYLHD-----ARKMFDTMTQRDEISWTTLISGYVKAMDSI 89
L V+ P +S + + SGYL + ARK+FD M +RD +SW +I GYV+ +
Sbjct: 84 LRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLG 143
Query: 90 EALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSAL 149
+A LF + P+ ++ C+ N +
Sbjct: 144 KARELFE---IMPERDV-----------CSWNT--------------------------M 163
Query: 150 LDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDS 209
L Y + G ++ VFD MP +N VSW A+++ V+ +E + F +S+E
Sbjct: 164 LSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLF----KSRENWAL 219
Query: 210 YTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFER 269
++ +L + R+ M R DVVS+ N++ T Y++ GK+D + +LF+
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVR--DVVSW--NTIITGYAQSGKIDEARQLFDE 275
Query: 270 MSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWG 329
+DV +WT +++ Y+Q E A + F +M E NE ++ A+++ R++
Sbjct: 276 SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMA 331
Query: 330 EQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQG 389
++L + ++S N+++ Y++CG+++ +F M +RD +SW+ +I GYSQ
Sbjct: 332 KEL----FDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQS 387
Query: 390 GYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIK 449
G+ EA M REG R N +F+S LS C ++ LE GKQ+H ++ G E +
Sbjct: 388 GHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 447
Query: 450 SALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLR 509
+AL+ MY KCGSI+EA+ +F E DIVSW MI GY+ HG+ + A+ FE + GL+
Sbjct: 448 NALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLK 507
Query: 510 PDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAEN 569
PD T + VL+ACSH GLVD G YF M+ YG +P+ +HY CM+DLL RAG L DA N
Sbjct: 508 PDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHN 567
Query: 570 MIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGR 629
+++NMP + D +W TLL A V G+ A+KI + P +G ++ L+N+YA+ GR
Sbjct: 568 LMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGR 627
Query: 630 WREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRM---LDLLASR 686
W + ++R MR KGV K PG+S I+++++ F D H + ++I+ LDL +
Sbjct: 628 WGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKK 687
Query: 687 ESDIDDLDSLVHDAED 702
+ ++HD E+
Sbjct: 688 AGYVSKTSVVLHDVEE 703
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 200/447 (44%), Gaps = 59/447 (13%)
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
++ W I+ +R G E L F M R S ++ ++ +G R++
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPR----WSSVSYNGMISGYLRNGEFELARKLF 118
Query: 233 TIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEE 292
M +R D+VS+ N + Y + L + LFE M RDV SW T+++ Y Q G +
Sbjct: 119 DEMPER--DLVSW--NVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVD 174
Query: 293 NAFDAFVRMQESDVKPNEYTFAAIISA----------------SANLARIQWGEQLHAHV 336
+A F RM E N+ ++ A++SA N A + W L V
Sbjct: 175 DARSVFDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFV 230
Query: 337 LRLGLV------DSLSVA-----NSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGG 385
+ +V DS++V N+I+ Y++ G++ +F +D+ +W+ ++ G
Sbjct: 231 KKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 386 YSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERT 445
Y Q EEA E M P NE ++ ++L+ +E K++ VM R
Sbjct: 291 YIQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMAKELF-DVMPC---RN 342
Query: 446 AMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPM 505
+ +I Y++CG I EA +F + D VSW AMI GY++ G+S EA+ LF ++
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 506 VGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMID-----LLCR 560
G R + +F L+ C+ ++LG + V GC + + C+
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRL------VKGGYETGCFVGNALLLMYCK 456
Query: 561 AGRLSDAENMIENMPHQKDDVVWSTLL 587
G + +A ++ + M KD V W+T++
Sbjct: 457 CGSIEEANDLFKEMA-GKDIVSWNTMI 482
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 82/195 (42%), Gaps = 28/195 (14%)
Query: 425 AILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI---------FYETESD 475
A+ + +Q+H ++ GL+R N +S +K A+Q +
Sbjct: 8 ALSRRAQQLHYTSLN-GLKRRCNNAHGAANFHS----LKRATQTQIQKSQTKPLLKCGDS 62
Query: 476 DIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYF 535
DI W I+ Y G EA+ +F+++P R SV++ G+++ G +L F
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMP----RWSSVSYNGMISGYLRNGEFELARKLF 118
Query: 536 NLMSDKYGFVPSKE--HYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQ 593
+ M P ++ + MI R L A + E MP ++D W+T+L
Sbjct: 119 DEM-------PERDLVSWNVMIKGYVRNRNLGKARELFEIMP-ERDVCSWNTMLSGYAQN 170
Query: 594 GDVNCGRHTAEKILE 608
G V+ R +++ E
Sbjct: 171 GCVDDARSVFDRMPE 185
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust.
Identities = 220/644 (34%), Positives = 352/644 (54%), Gaps = 8/644 (1%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRV---WVE 101
N+ + + G L AR++FD M RD +SW +LISGY EAL ++ + W+
Sbjct: 145 NALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIV 204
Query: 102 PQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIEL 161
P D F +S L A + V G+ LHG+ +K+G + V V + L+ MY K +
Sbjct: 205 P----DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTD 260
Query: 162 GCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASAD 221
RVFDEM +R+ VS+ +I G ++ +E + F E + + D T + VL+A
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 222 SGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTI 281
L+ + I+ MLK GF + S V N L +Y+KCG + + +F M +D +SW +I
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 282 ITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL 341
I+ Y+Q G+ A F M + + + T+ +IS S LA +++G+ LH++ ++ G+
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
LSV+N+++ MY+KCG++ + +F M D ++W+T+I + G +
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGS 461
MR+ P+ F L +C ++A GK+IH ++ G E I +ALI MYSKCG
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 462 IKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTA 521
++ +S++F D+V+WT MI Y +G ++A+ F + G+ PDSV F+ ++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 522 CSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV 581
CSH+GLVD G F M Y P EHY C++DLL R+ ++S AE I+ MP + D
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 582 VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMR 641
+W+++LRAC GD+ + +I+EL+P G I +N YAA +W + + +RK ++
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 642 SKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS 685
K + K PG+S I+V V F S D Q E IY+ L++L S
Sbjct: 740 DKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYS 783
Score = 223 bits (567), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 285/554 (51%), Gaps = 9/554 (1%)
Query: 75 WTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYT 134
W ++I + K EAL + ++ E +++ D + +KACA + G+ ++
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLR-ESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 135 VKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGL 194
+ GF + +FVG+AL+DMY+++G + +VFDEMP+R++VSW ++I+G G+ +E L
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 195 IYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMY 254
+ E+ S DS+T + VL A + + G+ +H LK G + V V N L MY
Sbjct: 193 EIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMY 252
Query: 255 SKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFA 314
K + + R+F+ M RD +S+ T+I Y+++ E + F+ + KP+ T +
Sbjct: 253 LKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLLTVS 311
Query: 315 AIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRR 374
+++ A +L + + ++ ++L+ G V +V N ++ +Y+KCG + + VF+ M +
Sbjct: 312 SVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECK 371
Query: 375 DIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIH 434
D +SW++II GY Q G EA + +M + + + ++SV +A L+ GK +H
Sbjct: 372 DTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLH 431
Query: 435 AHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQ 494
++ + G+ + +ALI+MY+KCG + ++ +IF + D V+W +I+ G
Sbjct: 432 SNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFA 491
Query: 495 EAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCM 554
+ + ++ + PD TF+ L C+ LG + ++G+ + +
Sbjct: 492 TGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLL-RFGYESELQIGNAL 550
Query: 555 IDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPS-- 612
I++ + G L ++ + E M ++D V W+ ++ A + G+ G E ++ S
Sbjct: 551 IEMYSKCGCLENSSRVFERM-SRRDVVTWTGMIYAYGMYGE---GEKALETFADMEKSGI 606
Query: 613 CAGTHITLANIYAA 626
+ + +A IYA
Sbjct: 607 VPDSVVFIAIIYAC 620
Score = 219 bits (557), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 151/518 (29%), Positives = 263/518 (50%), Gaps = 14/518 (2%)
Query: 108 PFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFD 167
PFI S AL + + N+N +H + G +S F L+D Y+ + VF
Sbjct: 8 PFI-SRALSSSS---NLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFR 63
Query: 168 EM-PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALN 226
+ P +NV W +II + G E L ++ ++ SK D YTF V+KA A
Sbjct: 64 RVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAE 123
Query: 227 FGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYV 286
G ++ +L GF+ FV N+L MYS+ G L + ++F+ M RD++SW ++I+ Y
Sbjct: 124 MGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYS 183
Query: 287 QMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLS 346
G E A + + ++ S + P+ +T ++++ A NL ++ G+ LH L+ G+ +
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVV 243
Query: 347 VANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREG 406
V N ++AMY K + T VF M RD +S++T+I GY + EE+ + L +
Sbjct: 244 VNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVR-MFLENLDQ 302
Query: 407 PRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEAS 466
+P+ +SVL CG++ L K I+ +++ G + +++ LI++Y+KCG + A
Sbjct: 303 FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITAR 362
Query: 467 QIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAG 526
+F E D VSW ++I+GY + G EA+ LF+ + ++ + D +T++ +++ +
Sbjct: 363 DVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTR-- 420
Query: 527 LVDLGFHYFNLMSD--KYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWS 584
L DL F L S+ K G +ID+ + G + D+ + +M D V W+
Sbjct: 421 LADLKFGK-GLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSM-GTGDTVTWN 478
Query: 585 TLLRACMVQGDVNCGRHTAEKIL--ELHPSCAGTHITL 620
T++ AC+ GD G ++ E+ P A +TL
Sbjct: 479 TVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTL 516
>sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protein At2g03380,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3
SV=1
Length = 689
Score = 390 bits (1003), Expect = e-107, Method: Compositional matrix adjust.
Identities = 205/604 (33%), Positives = 334/604 (55%), Gaps = 7/604 (1%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
GY DAR +FD + + D W ++ Y +S+E + L+ + ++ D + S A
Sbjct: 90 GYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYD-LLMKHGFRYDDIVFSKA 148
Query: 115 LKACALNVNVNYGESLHGYTVKT-GFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRN 173
LKAC +++ G+ +H VK F N V G LLDMY K G+I+ +VF+++ LRN
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRN 206
Query: 174 VVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
VV WT++I G V+ +EGL+ F M + G+ YT+ ++ A AL+ G+ H
Sbjct: 207 VVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHG 266
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
++K G ++ S + SL MY KCG + + R+F S D++ WT +I Y G
Sbjct: 267 CLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNE 326
Query: 294 AFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMA 353
A F +M+ ++KPN T A+++S + ++ G +H +++G+ D+ +VAN+++
Sbjct: 327 ALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT-NVANALVH 385
Query: 354 MYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFA 413
MY+KC Q VF +DI++W++II G+SQ G EA M E PN
Sbjct: 386 MYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVT 445
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMSIGL--ERTAMIKSALINMYSKCGSIKEASQIFYE 471
AS+ S C ++ L G +HA+ + +G + + +AL++ Y+KCG + A IF
Sbjct: 446 VASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDT 505
Query: 472 TESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
E + ++W+AMI GY + G + ++ LFE++ +P+ TF +L+AC H G+V+ G
Sbjct: 506 IEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEG 565
Query: 532 FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACM 591
YF+ M Y F PS +HY CM+D+L RAG L A ++IE MP Q D + L C
Sbjct: 566 KKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCG 625
Query: 592 VQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGW 651
+ + G +K+L+LHP A ++ ++N+YA+ GRW +A EVR +M+ +G+ K G
Sbjct: 626 MHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGH 685
Query: 652 SRIK 655
S ++
Sbjct: 686 STME 689
Score = 226 bits (577), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 166/574 (28%), Positives = 275/574 (47%), Gaps = 48/574 (8%)
Query: 13 LFASSAIACTERRPL-----LLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTM 67
+F+ + ACTE + L + Q ++P + + + L K G + A K+F+ +
Sbjct: 144 VFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVV-LTGLLDMYAKCGEIKSAHKVFNDI 202
Query: 68 TQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYG 127
T R+ + WT++I+GYVK E L LF+R+ E + + + + AC ++ G
Sbjct: 203 TLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMR-ENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 128 ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRA 187
+ HG VK+G S + ++LLDMY K G I RVF+E ++V WTA+I G
Sbjct: 262 KWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHN 321
Query: 188 GHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
G E L F +M + + + T A VL L GR +H + +K G + VA
Sbjct: 322 GSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VA 380
Query: 248 NSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVK 307
N+L MY+KC + + +FE S +D+++W +II+ + Q G A F RM V
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVT 440
Query: 308 PNEYTFAAIISASANLARIQWGEQLHAHVLRLGLV--DSLSVANSIMAMYSKCGQLTSTS 365
PN T A++ SA A+L + G LHA+ ++LG + S+ V +++ Y+KCG S
Sbjct: 441 PNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSAR 500
Query: 366 IVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMA 425
++F + ++ I+WS +IGGY + G + E M ++ +PNE F S+LS CG+
Sbjct: 501 LIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTG 560
Query: 426 ILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMIN 485
++ +GK+ S++ Y+ S K +T M++
Sbjct: 561 MVNEGKKYF---------------SSMYKDYNFTPSTKH---------------YTCMVD 590
Query: 486 GYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFV 545
A G ++A+ + EK+P ++PD F L C DLG M D +
Sbjct: 591 MLARAGELEQALDIIEKMP---IQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLH--- 644
Query: 546 PSKEHYGCMI-DLLCRAGRLSDAENMIENMPHQK 578
P Y ++ +L GR + A+ + N+ Q+
Sbjct: 645 PDDASYYVLVSNLYASDGRWNQAKE-VRNLMKQR 677
Score = 215 bits (548), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/488 (27%), Positives = 248/488 (50%), Gaps = 15/488 (3%)
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
L L C N++ HG G + + + + L+ +Y G + VFD++P
Sbjct: 49 LLLSKCT---NIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
+ W ++ + E + + + + + D F+ LKA + L+ G++IH
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH 165
Query: 233 TIMLK-RGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
++K FD V V L MY+KCG++ + ++F ++ R+V+ WT++I YV+
Sbjct: 166 CQLVKVPSFDNV--VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLC 223
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
E F RM+E++V NEYT+ +I A L+ + G+ H +++ G+ S + S+
Sbjct: 224 EEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSL 283
Query: 352 MAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNE 411
+ MY KCG +++ VF+ D++ W+ +I GY+ G EA M+ +PN
Sbjct: 284 LDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 412 FAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYE 471
ASVLS CG + LE G+ +H + +G+ T + +AL++MY+KC ++A +F
Sbjct: 344 VTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFEM 402
Query: 472 TESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
DIV+W ++I+G++++G EA+ LF ++ + P+ VT + +AC+ G + +G
Sbjct: 403 ESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVG 462
Query: 532 --FHYFNLMSDKYGFVPSKE-HYG-CMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
H +++ K GF+ S H G ++D + G A +I + +K+ + WS ++
Sbjct: 463 SSLHAYSV---KLGFLASSSVHVGTALLDFYAKCGDPQSAR-LIFDTIEEKNTITWSAMI 518
Query: 588 RACMVQGD 595
QGD
Sbjct: 519 GGYGKQGD 526
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 150/315 (47%), Gaps = 12/315 (3%)
Query: 316 IISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRD 375
++S N+ ++ Q H + GL+ +S+A ++++Y G +VF + D
Sbjct: 50 LLSKCTNIDSLR---QSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 376 IISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHA 435
W ++ Y E + L+ + G R ++ F+ L C + L+ GK+IH
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 436 HVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQE 495
++ + ++ + L++MY+KCG IK A ++F + ++V WT+MI GY ++ +E
Sbjct: 167 QLVKVP-SFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 496 AIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMI 555
+ LF ++ + + T+ ++ AC+ + G +F+ K G S ++
Sbjct: 226 GLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGCLVKSGIELSSCLVTSLL 284
Query: 556 DLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKI--LELHPSC 613
D+ + G +S+A + H D V+W+ ++ G VN +K+ +E+ P+C
Sbjct: 285 DMYVKCGDISNARRVFNEHSHV-DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNC 343
Query: 614 AGTHITLANIYAAKG 628
+T+A++ + G
Sbjct: 344 ----VTIASVLSGCG 354
>sp|Q9FXA9|PPR83_ARATH Putative pentatricopeptide repeat-containing protein At1g56570
OS=Arabidopsis thaliana GN=PCMP-E64 PE=3 SV=1
Length = 611
Score = 390 bits (1002), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/563 (35%), Positives = 326/563 (57%), Gaps = 7/563 (1%)
Query: 145 VGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSK 204
+ + L+ Y + G +E +FDEMP R+VV+WTA+ITG + +N F EM +
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 205 EQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCG-KLDYS 263
+ +T + VLK+ + L +G +H +++K G + +V N++ MY+ C ++ +
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAA 166
Query: 264 LRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANL 323
+F + ++ ++WTT+IT + +G+ + +M + + Y + ASA++
Sbjct: 167 CLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASI 226
Query: 324 ARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTII 383
+ G+Q+HA V++ G +L V NSI+ +Y +CG L+ FH M +D+I+W+T+I
Sbjct: 227 DSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLI 286
Query: 384 GGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLE 443
+ EA +G PN + F S+++ C N+A L G+Q+H + G
Sbjct: 287 SELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFN 345
Query: 444 RTAMIKSALINMYSKCGSIKEASQIFYE-TESDDIVSWTAMINGYAEHGYSQEAIHLFEK 502
+ + +ALI+MY+KCG+I ++ ++F E + ++VSWT+M+ GY HGY EA+ LF+K
Sbjct: 346 KNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 503 VPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAG 562
+ G+RPD + FM VL+AC HAGLV+ G YFN+M +YG P ++ Y C++DLL RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 563 RLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVN-CGRHTAEKILELHPSCAGTHITLA 621
++ +A ++E MP + D+ W +L AC R A K++EL P GT++ L+
Sbjct: 466 KIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLS 525
Query: 622 NIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLD 681
IYAA+G+W + A VRKMMR G KE G S I V++QV +F SD+ +Y +L
Sbjct: 526 YIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLG 585
Query: 682 LL--ASRESD-IDDLDSLVHDAE 701
LL +RE+ + +LDSLV+D E
Sbjct: 586 LLIEETREAGYVPELDSLVNDQE 608
Score = 245 bits (626), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 149/507 (29%), Positives = 252/507 (49%), Gaps = 45/507 (8%)
Query: 31 QGTQLPVYVSTPE---VNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMD 87
Q T+ P Y + + + G + +AR +FD M RD ++WT +I+GY +
Sbjct: 32 QNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNY 91
Query: 88 SIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGS 147
+ A F + V+ + + F LS LK+C + YG +HG VK G S++V +
Sbjct: 92 NARAWECFHEM-VKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDN 150
Query: 148 ALLDMYTKLG-KIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQ 206
A+++MY +E C +F ++ ++N V+WT +ITG G GL + +M +
Sbjct: 151 AMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAE 210
Query: 207 GDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRL 266
Y I ++ASA ++ G++IH ++KRGF V NS+ +Y +CG L +
Sbjct: 211 VTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHY 270
Query: 267 FERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARI 326
F M +D+I+W T+I S ++ + A F R + PN YTF ++++A AN+A +
Sbjct: 271 FHEMEDKDLITWNTLI-SELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAAL 329
Query: 327 QWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMI-RRDIISWSTIIGG 385
G+QLH + R G ++ +AN+++ MY+KCG + + VF ++ RR+++SW++++ G
Sbjct: 330 NCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIG 389
Query: 386 YSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQG-KQIHAHVMSIGLER 444
Y GY EA E M G RP+ F +VLS C + ++E+G K + G+
Sbjct: 390 YGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINP 449
Query: 445 TAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVP 504
I + ++++ + G I EA YE L E++P
Sbjct: 450 DRDIYNCVVDLLGRAGKIGEA----YE---------------------------LVERMP 478
Query: 505 MVGLRPDSVTFMGVLTAC---SHAGLV 528
+PD T+ +L AC H GL+
Sbjct: 479 ---FKPDESTWGAILGACKAHKHNGLI 502
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 9/179 (5%)
Query: 447 MIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMV 506
++ + LI Y + G ++EA +F E D+V+WTAMI GYA Y+ A F ++
Sbjct: 46 ILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQ 105
Query: 507 GLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSD 566
G P+ T VL +C + ++ G ++ K G S M+++ +
Sbjct: 106 GTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVV-KLGMEGSLYVDNAMMNMYATCSVTME 164
Query: 567 AENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKIL----ELHPSCAGTHITLA 621
A +I K+DV W+TL+ GD G +++L E+ P C IT+A
Sbjct: 165 AACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYC----ITIA 219
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/580 (34%), Positives = 328/580 (56%), Gaps = 6/580 (1%)
Query: 128 ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRA 187
+ +H + G S F+ + L+ + G I +VFD++P + W AII G R
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 188 GHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
H ++ L+ ++ M ++ DS+TF +LKA + L GR +H + + GFD FV
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 248 NSLATMYSKCGKLDYSLRLFE--RMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESD 305
N L +Y+KC +L + +FE + R ++SWT I+++Y Q GE A + F +M++ D
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 306 VKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTS 365
VKP+ ++++A L ++ G +HA V+++GL + S+ MY+KCGQ+ +
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 366 IVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMA 425
I+F M ++I W+ +I GY++ GY EA + M + RP+ + S +S C +
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 426 ILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMIN 485
LEQ + ++ +V I SALI+M++KCGS++ A +F T D+V W+AMI
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIV 397
Query: 486 GYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFV 545
GY HG ++EAI L+ + G+ P+ VTF+G+L AC+H+G+V G+ +FN M+D +
Sbjct: 398 GYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKIN 456
Query: 546 PSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEK 605
P ++HY C+IDLL RAG L A +I+ MP Q VW LL AC V G + A++
Sbjct: 457 PQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQ 516
Query: 606 ILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVS 665
+ + PS G ++ L+N+YAA W AEVR M+ KG+ K+ G S ++V+ ++ AF
Sbjct: 517 LFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 666 SDRRHSQGEDIYRMLDLLASRESD---IDDLDSLVHDAED 702
D+ H + E+I R ++ + SR + + + D+ +HD D
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLND 616
Score = 198 bits (504), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 213/434 (49%), Gaps = 4/434 (0%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACA 119
AR++FD + + W +I GY + +AL ++S + + +++ D F LKAC+
Sbjct: 72 ARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACS 130
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL--RNVVSW 177
++ G +H + GF VFV + L+ +Y K ++ VF+ +PL R +VSW
Sbjct: 131 GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSW 190
Query: 178 TAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLK 237
TAI++ + G E L F++M + + D VL A L GR IH ++K
Sbjct: 191 TAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVK 250
Query: 238 RGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDA 297
G ++ + SL TMY+KCG++ + LF++M + ++I W +I+ Y + G A D
Sbjct: 251 MGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDM 310
Query: 298 FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSK 357
F M DV+P+ + + ISA A + ++ ++ +V R D + ++++++ M++K
Sbjct: 311 FHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAK 370
Query: 358 CGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASV 417
CG + +VF + RD++ WS +I GY G EA M R G PN+ F +
Sbjct: 371 CGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 418 LSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE-SDD 476
L C + ++ +G + + + +I++ + G + +A ++
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPG 490
Query: 477 IVSWTAMINGYAEH 490
+ W A+++ +H
Sbjct: 491 VTVWGALLSACKKH 504
Score = 123 bits (308), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 142/281 (50%), Gaps = 7/281 (2%)
Query: 53 KSGYLHDARKMFD--TMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFI 110
K L AR +F+ + +R +SWT ++S Y + + +EAL +FS++ +M++ P
Sbjct: 166 KCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM---RKMDVKPDW 222
Query: 111 LSLA--LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDE 168
++L L A ++ G S+H VK G + +L MY K G++ +FD+
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDK 282
Query: 169 MPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFG 228
M N++ W A+I+G + G+ +E + F EM + D+ + + A A G+L
Sbjct: 283 MKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQA 342
Query: 229 REIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
R ++ + + + F++++L M++KCG ++ + +F+R RDV+ W+ +I Y
Sbjct: 343 RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLH 402
Query: 289 GEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWG 329
G A + M+ V PN+ TF ++ A + ++ G
Sbjct: 403 GRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
Query: 429 QGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYA 488
Q KQIHA ++ +GL+ + + + LI+ S G I A Q+F + I W A+I GY+
Sbjct: 36 QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYS 95
Query: 489 EHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSK 548
+ + Q+A+ ++ + + + PDS TF +L ACS + +G + + + GF
Sbjct: 96 RNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMG-RFVHAQVFRLGFDADV 154
Query: 549 EHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVV-WSTLLRACMVQGD 595
+I L + RL A + E +P + +V W+ ++ A G+
Sbjct: 155 FVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGE 202
>sp|Q9CA56|PP121_ARATH Pentatricopeptide repeat-containing protein At1g74600,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E69 PE=2
SV=1
Length = 895
Score = 386 bits (992), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/605 (34%), Positives = 335/605 (55%), Gaps = 9/605 (1%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K G++ +A ++F + +SWT ++SGY K+ D+ AL +F + + ++ ++
Sbjct: 297 KCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMR-HSGVEINNCTVT 355
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVF---DEM 169
+ AC V +H + K+GF V +AL+ MY+K G I+L +VF D++
Sbjct: 356 SVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 170 PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGR 229
+N+V+ +IT ++ + + F M + + D ++ +L LN G+
Sbjct: 416 QRQNIVN--VMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVL---DCLNLGK 470
Query: 230 EIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMG 289
++H LK G + V +SL T+YSKCG L+ S +LF+ + +D W ++I+ + + G
Sbjct: 471 QVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYG 530
Query: 290 EEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
A F M + P+E T AA+++ ++ + G+++H + LR G+ + + +
Sbjct: 531 YLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGS 590
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
+++ MYSKCG L V+ + D +S S++I GYSQ G ++ F M G
Sbjct: 591 ALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTM 650
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
+ FA +S+L G Q+HA++ IGL + S+L+ MYSK GSI + + F
Sbjct: 651 DSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAF 710
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
+ D+++WTA+I YA+HG + EA+ ++ + G +PD VTF+GVL+ACSH GLV+
Sbjct: 711 SQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVE 770
Query: 530 LGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
+ + N M YG P HY CM+D L R+GRL +AE+ I NM + D +VW TLL A
Sbjct: 771 ESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAA 830
Query: 590 CMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEP 649
C + G+V G+ A+K +EL PS AG +I+L+NI A G W E E RK+M+ GV KEP
Sbjct: 831 CKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEP 890
Query: 650 GWSRI 654
GWS +
Sbjct: 891 GWSSV 895
Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 164/541 (30%), Positives = 279/541 (51%), Gaps = 18/541 (3%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRV-WVEPQMNMDPFIL 111
SG + DA K+FDT+ Q D +S +ISGY + E+L FS++ ++ + N +
Sbjct: 96 NSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISY-- 153
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
+ AC+ + E + +T+K G+ V SAL+D+++K + E +VF +
Sbjct: 154 GSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLS 213
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
NV W II G +R + F EM ++ DSYT++ VL A A L FG+ +
Sbjct: 214 ANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVV 273
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
++K G + V FV ++ +Y+KCG + ++ +F R+ V+SWT +++ Y + +
Sbjct: 274 QARVIKCGAEDV-FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDA 332
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
+A + F M+ S V+ N T ++ISA + + Q+HA V + G SVA ++
Sbjct: 333 FSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAAL 392
Query: 352 MAMYSKCGQLTSTSIVFHGM---IRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPR 408
++MYSK G + + VF + R++I+ + +I +SQ +A M +EG R
Sbjct: 393 ISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLR 450
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
+EF+ S+LSV + L GKQ+H + + GL + S+L +YSKCGS++E+ ++
Sbjct: 451 TDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKL 507
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F D W +MI+G+ E+GY +EAI LF ++ G PD T VLT CS +
Sbjct: 508 FQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSL 567
Query: 529 DLG--FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTL 586
G H + L + G + ++++ + G L A + + +P + D V S+L
Sbjct: 568 PRGKEIHGYTL---RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLP-ELDPVSCSSL 623
Query: 587 L 587
+
Sbjct: 624 I 624
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/450 (26%), Positives = 220/450 (48%), Gaps = 15/450 (3%)
Query: 143 VFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWR 202
VF+ +LL Y+ G + ++FD +P +VVS +I+G + +E L +F++M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 203 SKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDY 262
+ + ++ V+ A + A F + +K G+ V ++L ++SK + +
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 263 SLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASAN 322
+ ++F + +V W TII ++ FD F M KP+ YT++++++A A+
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 323 LARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTI 382
L ++++G+ + A V++ G D V +I+ +Y+KCG + VF + ++SW+ +
Sbjct: 264 LEKLRFGKVVQARVIKCGAEDVF-VCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 383 IGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGL 442
+ GY++ A E MR G N SV+S CG +++ + Q+HA V G
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 443 ERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSW---TAMINGYAEHGYSQEAIHL 499
+ + +ALI+MYSK G I + Q+F + DDI MI +++ +AI L
Sbjct: 383 YLDSSVAAALISMYSKSGDIDLSEQVFEDL--DDIQRQNIVNVMITSFSQSKKPGKAIRL 440
Query: 500 FEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGCMIDL 557
F ++ GLR D + +L+ ++LG H + L K G V + L
Sbjct: 441 FTRMLQEGLRTDEFSVCSLLSVLD---CLNLGKQVHGYTL---KSGLVLDLTVGSSLFTL 494
Query: 558 LCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ G L ++ + + +P KD+ W++++
Sbjct: 495 YSKCGSLEESYKLFQGIPF-KDNACWASMI 523
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 137/272 (50%), Gaps = 8/272 (2%)
Query: 319 ASANLARIQWGEQLHAHVLRLGLVD-SLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDII 377
+++ L ++ + L AH+LR L+ + + S+++ YS G + + +F + + D++
Sbjct: 57 SNSRLCNLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVV 116
Query: 378 SWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHV 437
S + +I GY Q EE+ + + M G NE ++ SV+S C + + + H
Sbjct: 117 SCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHT 176
Query: 438 MSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAI 497
+ +G +++SALI+++SK ++A ++F ++ S ++ W +I G +
Sbjct: 177 IKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVF 236
Query: 498 HLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGC--MI 555
LF ++ + +PDS T+ VL AC A L L F ++ + +++ + C ++
Sbjct: 237 DLFHEMCVGFQKPDSYTYSSVLAAC--ASLEKLRFG--KVVQARVIKCGAEDVFVCTAIV 292
Query: 556 DLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
DL + G +++A + +P+ V W+ +L
Sbjct: 293 DLYAKCGHMAEAMEVFSRIPN-PSVVSWTVML 323
Score = 34.7 bits (78), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 8/95 (8%)
Query: 32 GTQLPVYVST------PEVNSQLKHLV-KSGYLHDARKMFDTMTQRDEISWTTLISGYVK 84
G Q+ Y++ P V S L + K G + D K F + D I+WT LI+ Y +
Sbjct: 671 GAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQ 730
Query: 85 AMDSIEALALFSRVWVEPQMNMDPFILSLALKACA 119
+ EAL +++ + E D L AC+
Sbjct: 731 HGKANEALQVYN-LMKEKGFKPDKVTFVGVLSACS 764
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 385 bits (989), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/664 (33%), Positives = 354/664 (53%), Gaps = 37/664 (5%)
Query: 75 WTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYT 134
+ +LI GY + EA+ LF R+ + ++ D + L ACA + G +HG
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRM-MNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLI 160
Query: 135 VKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGL 194
VK G+ +FV ++L+ Y + G+++ +VFDEM RNVVSWT++I G R K+ +
Sbjct: 161 VKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAV 220
Query: 195 IYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATM 253
F M R +E +S T V+ A A L G +++ + G +V + ++L M
Sbjct: 221 DLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDM 280
Query: 254 YSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTF 313
Y KC +D + RLF+ ++ + ++YV+ G A F M +S V+P+ +
Sbjct: 281 YMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISM 340
Query: 314 AAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQ------------- 360
+ IS+ + L I WG+ H +VLR G ++ N+++ MY KC +
Sbjct: 341 LSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSN 400
Query: 361 ---LTSTSIV---------------FHGMIRRDIISWSTIIGGYSQGGYEEEAFE-YLAL 401
+T SIV F M ++I+SW+TII G QG EEA E + ++
Sbjct: 401 KTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM 460
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGS 461
+EG + S+ S CG++ L+ K I+ ++ G++ + + L++M+S+CG
Sbjct: 461 QSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGD 520
Query: 462 IKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTA 521
+ A IF + D+ +WTA I A G ++ AI LF+ + GL+PD V F+G LTA
Sbjct: 521 PESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTA 580
Query: 522 CSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV 581
CSH GLV G F M +G P HYGCM+DLL RAG L +A +IE+MP + +DV
Sbjct: 581 CSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDV 640
Query: 582 VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMR 641
+W++LL AC VQG+V + AEKI L P G+++ L+N+YA+ GRW + A+VR M+
Sbjct: 641 IWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMK 700
Query: 642 SKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRES---DIDDLDSLVH 698
KG+ K PG S I+++ + F S D H + +I MLD ++ R S + DL +++
Sbjct: 701 EKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLM 760
Query: 699 DAED 702
D ++
Sbjct: 761 DVDE 764
Score = 196 bits (497), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 247/499 (49%), Gaps = 38/499 (7%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
NS + + G L ARK+FD M++R+ +SWT++I GY + + +A+ LF R+ + ++
Sbjct: 173 NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEV 232
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGF-VNSVFVGSALLDMYTKLGKIELGC 163
+ + + ACA ++ GE ++ + +G VN + V SAL+DMY K I++
Sbjct: 233 TPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV-SALVDMYMKCNAIDVAK 291
Query: 164 RVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSG 223
R+FDE N+ A+ + VR G +E L F M S + D + + + +
Sbjct: 292 RLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLR 351
Query: 224 ALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIIT 283
+ +G+ H +L+ GF+ + N+L MY KC + D + R+F+RMS + V++W +I+
Sbjct: 352 NILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVA 411
Query: 284 SYVQMGEEENAFDAFVRMQESD--------------------------------VKPNEY 311
YV+ GE + A++ F M E + V +
Sbjct: 412 GYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGV 471
Query: 312 TFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGM 371
T +I SA +L + + ++ ++ + G+ + + +++ M+S+CG S +F+ +
Sbjct: 472 TMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
Query: 372 IRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGK 431
RD+ +W+ IG + G E A E M +G +P+ AF L+ C + +++QGK
Sbjct: 532 TNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGK 591
Query: 432 QIHAHVMSI-GLERTAMIKSALINMYSKCGSIKEASQIFYE--TESDDIVSWTAMINGYA 488
+I ++ + G+ + ++++ + G ++EA Q+ + E +D++ W +++
Sbjct: 592 EIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVI-WNSLLAACR 650
Query: 489 EHGYSQEAIHLFEKVPMVG 507
G + A + EK+ ++
Sbjct: 651 VQGNVEMAAYAAEKIQVLA 669
>sp|Q9SS83|PP220_ARATH Pentatricopeptide repeat-containing protein At3g09040, mitochondrial
OS=Arabidopsis thaliana GN=PCMP-E88 PE=2 SV=1
Length = 1028
Score = 382 bits (980), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/705 (31%), Positives = 369/705 (52%), Gaps = 13/705 (1%)
Query: 3 LQSTRHRVGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLV-KSGYLHDAR 61
++STR +G + ++ I L++ S V S L + K + A
Sbjct: 323 VKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAA 382
Query: 62 KMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALN 121
K+F+ + +++++ W +I GY +S + + LF + N+D F + L CA +
Sbjct: 383 KVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDM-KSSGYNIDDFTFTSLLSTCAAS 441
Query: 122 VNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAII 181
++ G H +K ++FVG+AL+DMY K G +E ++F+ M R+ V+W II
Sbjct: 442 HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTII 501
Query: 182 TGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFD 241
V+ + E F M D A LKA L G+++H + +K G D
Sbjct: 502 GSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLD 561
Query: 242 VVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM 301
+SL MYSKCG + + ++F + V+S +I Y Q EE A F M
Sbjct: 562 RDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEE-AVVLFQEM 620
Query: 302 QESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLV-DSLSVANSIMAMYSKCGQ 360
V P+E TFA I+ A + G Q H + + G + + S++ MY
Sbjct: 621 LTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRG 680
Query: 361 LTSTSIVFHGMIR-RDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLS 419
+T +F + + I+ W+ ++ G+SQ G+ EEA ++ MR +G P++ F +VL
Sbjct: 681 MTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLR 740
Query: 420 VCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETES-DDIV 478
VC ++ L +G+ IH+ + + + + + LI+MY+KCG +K +SQ+F E ++V
Sbjct: 741 VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVV 800
Query: 479 SWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLM 538
SW ++INGYA++GY+++A+ +F+ + + PD +TF+GVLTACSHAG V G F +M
Sbjct: 801 SWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMM 860
Query: 539 SDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNC 598
+YG +H CM+DLL R G L +A++ IE + D +WS+LL AC + GD
Sbjct: 861 IGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIR 920
Query: 599 GRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKD 658
G +AEK++EL P + ++ L+NIYA++G W +A +RK+MR +GV K PG+S I V+
Sbjct: 921 GEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQ 980
Query: 659 QVSAFVSSDRRHSQ-------GEDIYRMLDLLASRESDIDDLDSL 696
+ F + D+ HS+ ED+Y ++ A DI + SL
Sbjct: 981 RTHIFAAGDKSHSEIGKIEMFLEDLYDLMKDDAVVNPDIVEQGSL 1025
Score = 266 bits (679), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 168/573 (29%), Positives = 283/573 (49%), Gaps = 20/573 (3%)
Query: 52 VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFIL 111
++ G L DAR +F M+ D ++W +ISG+ K A+ F + + + L
Sbjct: 272 IRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMR-KSSVKSTRSTL 330
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
L A + N++ G +H +K G ++++VGS+L+ MY+K K+E +VF+ +
Sbjct: 331 GSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEE 390
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
+N V W A+I G G + + + F +M S D +TF +L A S L G +
Sbjct: 391 KNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
H+I++K+ FV N+L MY+KCG L+ + ++FERM RD ++W TII SYVQ E
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
AFD F RM + + A+ + A ++ + G+Q+H ++ GL L +S+
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSL 570
Query: 352 MAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNE 411
+ MYSKCG + VF + ++S + +I GYSQ EE + ++ R G P+E
Sbjct: 571 IDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLEEAVVLFQEMLTR-GVNPSE 629
Query: 412 FAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTA-MIKSALINMYSKCGSIKEASQIFY 470
FA+++ C L G Q H + G + +L+ MY + EA +F
Sbjct: 630 ITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFS 689
Query: 471 ETES-DDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
E S IV WT M++G++++G+ +EA+ ++++ G+ PD TF+ VL CS +
Sbjct: 690 ELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLR 749
Query: 530 LG--FH--YFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWST 585
G H F+L D + +ID+ + G + + + + M + + V W++
Sbjct: 750 EGRAIHSLIFHLAHDLDELTSNT-----LIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNS 804
Query: 586 LLRACMVQGDVNCGRHTAEKILELHPSCAGTHI 618
L+ G AE L++ S +HI
Sbjct: 805 LINGYAKNG-------YAEDALKIFDSMRQSHI 830
Score = 247 bits (630), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 289/628 (46%), Gaps = 75/628 (11%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K + DAR++F+ + + + WT L SGYVKA EA+ +F R+ E P L+
Sbjct: 207 KCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHR---PDHLA 263
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
+++ Y +LGK++ +F EM
Sbjct: 264 FV---------------------------------TVINTYIRLGKLKDARLLFGEMSSP 290
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
+VV+W +I+G + G + YF M +S + T VL A L+ G +H
Sbjct: 291 DVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVH 350
Query: 233 TIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEE 292
+K G +V +SL +MYSKC K++ + ++FE + ++ + W +I Y GE
Sbjct: 351 AEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESH 410
Query: 293 NAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIM 352
+ F+ M+ S +++TF +++S A ++ G Q H+ +++ L +L V N+++
Sbjct: 411 KVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALV 470
Query: 353 AMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEF 412
MY+KCG L +F M RD ++W+TIIG Y Q E EAF+ M G +
Sbjct: 471 DMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGA 530
Query: 413 AFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYET 472
AS L C ++ L QGKQ+H + GL+R S+LI+MYSKCG IK+A ++F
Sbjct: 531 CLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSL 590
Query: 473 ESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGF 532
+VS A+I GY+++ +EA+ LF+++ G+ P +TF ++ AC + LG
Sbjct: 591 PEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGT 649
Query: 533 HYFNLMSDKYGFVPSKEHYG-CMIDLLCRAGRLSDAENMIENMPHQKDDVVWS------- 584
+ ++ K GF E+ G ++ + + +++A + + K V+W+
Sbjct: 650 QFHGQIT-KRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHS 708
Query: 585 ----------------------------TLLRACMVQGDVNCGRHTAEKILEL-HPSCAG 615
T+LR C V + GR I L H
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 616 THITLANIYAAKGRWREAAEVRKMMRSK 643
T TL ++YA G + +++V MR +
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRR 796
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 146/535 (27%), Positives = 253/535 (47%), Gaps = 44/535 (8%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACA 119
A K FD + ++D +W +++S Y + L F ++ E Q+ + F S+ L CA
Sbjct: 114 AEKQFDFL-EKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF-ENQIFPNKFTFSIVLSTCA 171
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
NV +G +H +K G + + G AL+DMY K +I RVF+ + N V WT
Sbjct: 172 RETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTC 231
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
+ +G V+AG +E ++ F M + D F V+
Sbjct: 232 LFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINT--------------------- 270
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
Y + GKL + LF MS+ DV++W +I+ + + G E A + F
Sbjct: 271 --------------YIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFF 316
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
M++S VK T +++SA +A + G +HA ++LGL ++ V +S+++MYSKC
Sbjct: 317 NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCE 376
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLS 419
++ + + VF + ++ + W+ +I GY+ G + E M+ G ++F F S+LS
Sbjct: 377 KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLS 436
Query: 420 VCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVS 479
C LE G Q H+ ++ L + + +AL++MY+KCG++++A QIF D V+
Sbjct: 437 TCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVT 496
Query: 480 WTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMS 539
W +I Y + EA LF+++ + G+ D L AC+H + G + +S
Sbjct: 497 WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLS 555
Query: 540 DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQG 594
K G +ID+ + G + DA + ++P WS + ++ G
Sbjct: 556 VKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPE------WSVVSMNALIAG 604
Score = 207 bits (528), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 232/470 (49%), Gaps = 42/470 (8%)
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
L + + G+++H ++ G + +G+A++D+Y K ++ + FD + ++V +W +
Sbjct: 72 LALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNS 130
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
+++ G + L F ++ ++ + +TF+IVL A + FGR+IH M+K G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
+ S+ +L MY+KC ++ + R+FE + + + WT + + YV+ G E A F
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
RM++ +P+ F +I+ Y + G
Sbjct: 251 RMRDEGHRPDHLAFVTVINT-----------------------------------YIRLG 275
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLS 419
+L ++F M D+++W+ +I G+ + G E A EY MR+ + SVLS
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335
Query: 420 VCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVS 479
G +A L+ G +HA + +GL + S+L++MYSKC ++ A+++F E + V
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395
Query: 480 WTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMS 539
W AMI GYA +G S + + LF + G D TF +L+ C+ + +++G + +++
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIII 455
Query: 540 DKYGFVPSKEHY--GCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
K +K + ++D+ + G L DA + E M +D+V W+T++
Sbjct: 456 KKK---LAKNLFVGNALVDMYAKCGALEDARQIFERMC-DRDNVTWNTII 501
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 380 bits (976), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/694 (31%), Positives = 380/694 (54%), Gaps = 23/694 (3%)
Query: 15 ASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEIS 74
++ AI C +L +G+ L ++ + N L VK+G+ DA +FD M +R+ +S
Sbjct: 67 SAKAIHCD-----ILKKGSCLDLFAT----NILLNAYVKAGFDKDALNLFDEMPERNNVS 117
Query: 75 WTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGES---LH 131
+ TL GY + + L+SR+ E ++P + + LK L V+++ E LH
Sbjct: 118 FVTLAQGYA----CQDPIGLYSRLHREGH-ELNPHVFTSFLK---LFVSLDKAEICPWLH 169
Query: 132 GYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNK 191
VK G+ ++ FVG+AL++ Y+ G ++ VF+ + +++V W I++ V G+ +
Sbjct: 170 SPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFE 229
Query: 192 EGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLA 251
+ L + M + ++YTF LKAS GA +F + +H +LK + + V L
Sbjct: 230 DSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLL 289
Query: 252 TMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEY 311
+Y++ G + + ++F M DV+ W+ +I + Q G A D F+RM+E+ V PNE+
Sbjct: 290 QLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEF 349
Query: 312 TFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGM 371
T ++I++ A GEQLH V+++G + V+N+++ +Y+KC ++ + +F +
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAEL 409
Query: 372 IRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGK 431
++ +SW+T+I GY G +AF R E F+S L C ++A ++ G
Sbjct: 410 SSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGV 469
Query: 432 QIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHG 491
Q+H + + + ++LI+MY+KCG IK A +F E E+ D+ SW A+I+GY+ HG
Sbjct: 470 QVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHG 529
Query: 492 YSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHY 551
++A+ + + + +P+ +TF+GVL+ CS+AGL+D G F M +G P EHY
Sbjct: 530 LGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHY 589
Query: 552 GCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHP 611
CM+ LL R+G+L A +IE +P++ ++W +L A M Q + R +AE+IL+++P
Sbjct: 590 TCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINP 649
Query: 612 SCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHS 671
T++ ++N+YA +W A +RK M+ GV KEPG S I+ + V F H
Sbjct: 650 KDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHP 709
Query: 672 QGEDIYRMLDLL---ASRESDIDDLDSLVHDAED 702
+ I ML+ L A+R + D ++++ D +D
Sbjct: 710 DMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDD 743
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/480 (26%), Positives = 224/480 (46%), Gaps = 6/480 (1%)
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
L+ C + +++H +K G +F + LL+ Y K G + +FDEMP RN
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERNN 115
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
VS+ + G A + GL ++ + R + + + F LK +H+
Sbjct: 116 VSFVTLAQGY--ACQDPIGL--YSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSP 171
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
++K G+D +FV +L YS CG +D + +FE + +D++ W I++ YV+ G E++
Sbjct: 172 IVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDS 231
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAM 354
M+ + PN YTF + AS L + + +H +L+ V V ++ +
Sbjct: 232 LKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQL 291
Query: 355 YSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAF 414
Y++ G ++ VF+ M + D++ WS +I + Q G+ EA + MR PNEF
Sbjct: 292 YTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTL 351
Query: 415 ASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETES 474
+S+L+ C G+Q+H V+ +G + + +ALI++Y+KC + A ++F E S
Sbjct: 352 SSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSS 411
Query: 475 DDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHY 534
+ VSW +I GY G +A +F + + VTF L AC+ +DLG
Sbjct: 412 KNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQV 471
Query: 535 FNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQG 594
L + K +ID+ + G + A+++ M D W+ L+ G
Sbjct: 472 HGL-AIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEM-ETIDVASWNALISGYSTHG 529
Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 178/380 (46%), Gaps = 6/380 (1%)
Query: 208 DSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLF 267
DS+ + +L+ + IH +LK+G + F N L Y K G +L LF
Sbjct: 48 DSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLF 107
Query: 268 ERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQ 327
+ M R+ +S+ T+ Y ++ + R+ + N + F + + +L + +
Sbjct: 108 DEMPERNNVSFVTLAQGYAC----QDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAE 163
Query: 328 WGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYS 387
LH+ +++LG + V +++ YS CG + S VF G++ +DI+ W+ I+ Y
Sbjct: 164 ICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYV 223
Query: 388 QGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAM 447
+ GY E++ + L+ MR G PN + F + L + + K +H ++
Sbjct: 224 ENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 448 IKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVG 507
+ L+ +Y++ G + +A ++F E +D+V W+ MI + ++G+ EA+ LF ++
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAF 343
Query: 508 LRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDA 567
+ P+ T +L C+ LG L+ K GF +ID+ + ++ A
Sbjct: 344 VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV-KVGFDLDIYVSNALIDVYAKCEKMDTA 402
Query: 568 ENMIENMPHQKDDVVWSTLL 587
+ + K++V W+T++
Sbjct: 403 VKLFAELS-SKNEVSWNTVI 421
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/649 (35%), Positives = 355/649 (54%), Gaps = 11/649 (1%)
Query: 51 LVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALF----SRVWVEPQMNM 106
KSG L ARK+F+ M R+ ++ L+ G V+ EA LF S + V P+ +
Sbjct: 253 FAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYV 312
Query: 107 DPFILSLALKACALNVNVNYGESLHGYTVKTGFVN-SVFVGSALLDMYTKLGKIELGCRV 165
+ S + A V + G +HG+ + TG V+ V +G+ L++MY K G I RV
Sbjct: 313 -ILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRV 371
Query: 166 FDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGAL 225
F M ++ VSW ++ITGL + G E + + M R S+T L + A
Sbjct: 372 FYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWA 431
Query: 226 NFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSY 285
G++IH LK G D+ V+N+L T+Y++ G L+ ++F M D +SW +II +
Sbjct: 432 KLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGAL 491
Query: 286 VQMGEE-ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDS 344
+ A F+ Q + K N TF++++SA ++L+ + G+Q+H L+ + D
Sbjct: 492 ARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADE 551
Query: 345 LSVANSIMAMYSKCGQLTSTSIVFHGMI-RRDIISWSTIIGGYSQGGYEEEAFEYLALMR 403
+ N+++A Y KCG++ +F M RRD ++W+++I GY +A + + M
Sbjct: 552 ATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML 611
Query: 404 REGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIK 463
+ G R + F +A+VLS ++A LE+G ++HA + LE ++ SAL++MYSKCG +
Sbjct: 612 QTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLD 671
Query: 464 EASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVG-LRPDSVTFMGVLTAC 522
A + F + SW +MI+GYA HG +EA+ LFE + + G PD VTF+GVL+AC
Sbjct: 672 YALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSAC 731
Query: 523 SHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVV 582
SHAGL++ GF +F MSD YG P EH+ CM D+L RAG L E+ IE MP + + ++
Sbjct: 732 SHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLI 791
Query: 583 WSTLLRACMVQG--DVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMM 640
W T+L AC G+ AE + +L P A ++ L N+YAA GRW + + RK M
Sbjct: 792 WRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKM 851
Query: 641 RSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESD 689
+ V KE G+S + +KD V FV+ D+ H + IY+ L L + D
Sbjct: 852 KDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRD 900
Score = 224 bits (572), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 249/471 (52%), Gaps = 14/471 (2%)
Query: 130 LHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGH 189
H K V++ + L++ Y + G +VFDEMPLRN VSW I++G R G
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 190 NKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALN--FGREIHTIMLKRGFDVVSFVA 247
+KE L++ +M + + Y F VL+A + G++ FGR+IH +M K + V + V+
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 248 NSLATMYSKC-GKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDV 306
N L +MY KC G + Y+L F + ++ +SW +II+ Y Q G++ +AF F MQ
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 307 KPNEYTFAAIISASANLAR--IQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTST 364
+P EYTF ++++ + +L ++ EQ+ + + GL+ L V + +++ ++K G L+
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 365 SIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNM 424
VF+ M R+ ++ + ++ G + + EEA + M E ++ +LS
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPE-SYVILLSSFPEY 321
Query: 425 AI-----LEQGKQIHAHVMSIGL-ERTAMIKSALINMYSKCGSIKEASQIFYETESDDIV 478
++ L++G+++H HV++ GL + I + L+NMY+KCGSI +A ++FY D V
Sbjct: 322 SLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSV 381
Query: 479 SWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLM 538
SW +MI G ++G EA+ ++ + + P S T + L++C+ LG +
Sbjct: 382 SWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLG-QQIHGE 440
Query: 539 SDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
S K G + ++ L G L++ + +MP + D V W++++ A
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 153/562 (27%), Positives = 263/562 (46%), Gaps = 17/562 (3%)
Query: 37 VYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFS 96
VY+ +N+ L+ +G ARK+FD M R+ +SW ++SGY + + EAL +F
Sbjct: 36 VYLCNNLINAYLE----TGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEAL-VFL 90
Query: 97 RVWVEPQMNMDPFILSLALKACAL--NVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYT 154
R V+ + + + L+AC +V + +G +HG K + V + L+ MY
Sbjct: 91 RDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYW 150
Query: 155 K-LGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFA 213
K +G + F ++ ++N VSW +II+ +AG + F+ M + YTF
Sbjct: 151 KCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFG 210
Query: 214 --IVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMS 271
+ S + +I + K G FV + L + ++K G L Y+ ++F +M
Sbjct: 211 SLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQME 270
Query: 272 TRDVISWTTIITSYVQMGEEENAFDAFVRMQES-DVKPNEYTFAAIISASANLAR---IQ 327
TR+ ++ ++ V+ E A F+ M DV P Y +LA ++
Sbjct: 271 TRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLK 330
Query: 328 WGEQLHAHVLRLGLVDSL-SVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGY 386
G ++H HV+ GLVD + + N ++ MY+KCG + VF+ M +D +SW+++I G
Sbjct: 331 KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL 390
Query: 387 SQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTA 446
Q G EA E MRR P F S LS C ++ + G+QIH + +G++
Sbjct: 391 DQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNV 450
Query: 447 MIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYS-QEAIHLFEKVPM 505
+ +AL+ +Y++ G + E +IF D VSW ++I A S EA+ F
Sbjct: 451 SVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQR 510
Query: 506 VGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLS 565
G + + +TF VL+A S +LG L + K +I + G +
Sbjct: 511 AGQKLNRITFSSVLSAVSSLSFGELGKQIHGL-ALKNNIADEATTENALIACYGKCGEMD 569
Query: 566 DAENMIENMPHQKDDVVWSTLL 587
E + M ++D+V W++++
Sbjct: 570 GCEKIFSRMAERRDNVTWNSMI 591
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 182/364 (50%), Gaps = 22/364 (6%)
Query: 32 GTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSI-E 90
G L V VS N+ + ++GYL++ RK+F +M + D++SW ++I ++ S+ E
Sbjct: 445 GIDLNVSVS----NALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE 500
Query: 91 ALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALL 150
A+ F Q ++ S L A + G+ +HG +K + +AL+
Sbjct: 501 AVVCFLNAQRAGQ-KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALI 559
Query: 151 DMYTKLGKIELGC-RVFDEMP-LRNVVSWTAIITGLVRAGHNK-----EGLIYFAEMWRS 203
Y K G+++ GC ++F M R+ V+W ++I+G + HN+ L++F M ++
Sbjct: 560 ACYGKCGEMD-GCEKIFSRMAERRDNVTWNSMISGYI---HNELLAKALDLVWF--MLQT 613
Query: 204 KEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYS 263
++ DS+ +A VL A A L G E+H ++ + V ++L MYSKCG+LDY+
Sbjct: 614 GQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYA 673
Query: 264 LRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQ-ESDVKPNEYTFAAIISASAN 322
LR F M R+ SW ++I+ Y + G+ E A F M+ + P+ TF ++SA ++
Sbjct: 674 LRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSH 733
Query: 323 LARIQWG-EQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGM-IRRDIISWS 380
++ G + + GL + + + + + G+L M ++ +++ W
Sbjct: 734 AGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWR 793
Query: 381 TIIG 384
T++G
Sbjct: 794 TVLG 797
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 182/384 (47%), Gaps = 42/384 (10%)
Query: 229 REIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
R H+ + K D ++ N+L Y + G + ++F+ M R+ +SW I++ Y +
Sbjct: 21 RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRN 80
Query: 289 GEEENAFDAFVRMQESDVKPNEYTFAAIISASANLAR--IQWGEQLHAHVLRLGLVDSLS 346
GE + A M + + N+Y F +++ A + I +G Q+H + +L
Sbjct: 81 GEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAV 140
Query: 347 VANSIMAMYSKC-GQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRRE 405
V+N +++MY KC G + F + ++ +SW++II YSQ G + AF + M+ +
Sbjct: 141 VSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYD 200
Query: 406 GPRPNEFAFASVLSVCGNMA-----ILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCG 460
G RP E+ F S+++ ++ +LE QI + GL + S L++ ++K G
Sbjct: 201 GSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGLVSAFAKSG 257
Query: 461 SIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKV-PMVGLRPDSVTFMGVL 519
S+ A ++F + E+ + V+ ++ G + +EA LF + M+ + P+S + L
Sbjct: 258 SLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVIL--L 315
Query: 520 TACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYG----------------CMIDLLCRAGR 563
++ F ++L +++ G +E +G ++++ + G
Sbjct: 316 SS----------FPEYSL-AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 564 LSDAENMIENMPHQKDDVVWSTLL 587
++DA + M KD V W++++
Sbjct: 365 IADARRVFYFMT-DKDSVSWNSMI 387
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 379 bits (974), Expect = e-104, Method: Compositional matrix adjust.
Identities = 208/656 (31%), Positives = 348/656 (53%), Gaps = 25/656 (3%)
Query: 59 DARKMFDTMTQRDEISWTTLISGYVKAMDSIEALAL-FSRVWVEPQMNMDPFILSLALKA 117
++ ++F + +++ +SW+ +I+G V+ +++ +LAL F + + + I + L++
Sbjct: 233 ESLRVFQGIPEKNSVSWSAIIAGCVQ--NNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 118 CALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSW 177
CA + G LH + +K+ F V +A LDMY K ++ +FD N S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 178 TAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLK 237
A+ITG + H + L+ F + S D + + V +A A L+ G +I+ + +K
Sbjct: 351 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 410
Query: 238 RGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDA 297
+ VAN+ MY KC L + R+F+ M RD +SW II ++ Q G+
Sbjct: 411 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 470
Query: 298 FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSK 357
FV M S ++P+E+TF +I+ A + +G ++H+ +++ G+ + SV S++ MYSK
Sbjct: 471 FVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 358 CGQLTSTSIVFHGMIRRD--------------------IISWSTIIGGYSQGGYEEEAFE 397
CG + + +R +SW++II GY E+A
Sbjct: 530 CGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQM 589
Query: 398 YLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYS 457
M G P++F +A+VL C N+A GKQIHA V+ L+ I S L++MYS
Sbjct: 590 LFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYS 649
Query: 458 KCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMG 517
KCG + ++ +F ++ D V+W AMI GYA HG +EAI LFE++ + ++P+ VTF+
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFIS 709
Query: 518 VLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQ 577
+L AC+H GL+D G YF +M YG P HY M+D+L ++G++ A +I MP +
Sbjct: 710 ILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFE 769
Query: 578 KDDVVWSTLLRACMV-QGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEV 636
DDV+W TLL C + + +V +L L P + + L+N+YA G W + +++
Sbjct: 770 ADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDL 829
Query: 637 RKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDIDD 692
R+ MR + KEPG S +++KD++ F+ D+ H + E+IY L L+ S DD
Sbjct: 830 RRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMKPFDD 885
Score = 240 bits (613), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 165/568 (29%), Positives = 270/568 (47%), Gaps = 34/568 (5%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N + KS + A F+ M RD +SW +++SGY++ +S++++ +F + E +
Sbjct: 118 NKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG-I 176
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
D ++ LK C+ + + G +HG V+ G V SALLDMY K + R
Sbjct: 177 EFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLR 236
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
VF +P +N VSW+AII G V+ L +F EM + +A VL++ A
Sbjct: 237 VFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSE 296
Query: 225 LNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITS 284
L G ++H LK F V + MY+KC + + LF+ + S+ +IT
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 285 YVQMGEEENAFDA---FVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL 341
Y Q EE+ F A F R+ S + +E + + + A A + + G Q++ ++ L
Sbjct: 357 YSQ---EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSL 413
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
+ VAN+ + MY KC L VF M RRD +SW+ II + Q G E
Sbjct: 414 SLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVS 473
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGS 461
M R P+EF F S+L C + L G +IH+ ++ G+ + + +LI+MYSKCG
Sbjct: 474 MLRSRIEPDEFTFGSILKACTGGS-LGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGM 532
Query: 462 IKEASQI---FYETES-----------------DDIVSWTAMINGYAEHGYSQEAIHLFE 501
I+EA +I F++ + + VSW ++I+GY S++A LF
Sbjct: 533 IEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFT 592
Query: 502 KVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGC--MIDLLC 559
++ +G+ PD T+ VL C++ LG + K + Y C ++D+
Sbjct: 593 RMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE---LQSDVYICSTLVDMYS 649
Query: 560 RAGRLSDAENMIENMPHQKDDVVWSTLL 587
+ G L D+ M E ++D V W+ ++
Sbjct: 650 KCGDLHDSRLMFEK-SLRRDFVTWNAMI 676
Score = 202 bits (515), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 140/495 (28%), Positives = 233/495 (47%), Gaps = 41/495 (8%)
Query: 111 LSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMP 170
S K CA + G+ H + + +GF + FV + LL +YT VFD+MP
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 171 LRNVVSWTAII-------------------------------TGLVRAGHNKEGLIYFAE 199
LR+VVSW +I +G ++ G + + + F +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 200 MWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGK 259
M R + D TFAI+LK + + G +IH I+++ G D A++L MY+K +
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 260 LDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISA 319
SLR+F+ + ++ +SW+ II VQ A F MQ+ + ++ +A+++ +
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRS 290
Query: 320 SANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISW 379
A L+ ++ G QLHAH L+ V + + MY+KC + I+F + S+
Sbjct: 291 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 350
Query: 380 STIIGGYSQGGYEEEAFEYLALMRR---EGPRPNEFAFASVLSVCGNMAILEQGKQIHAH 436
+ +I GYSQ EE F+ L L R G +E + + V C + L +G QI+
Sbjct: 351 NAMITGYSQ---EEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL 407
Query: 437 VMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEA 496
+ L + +A I+MY KC ++ EA ++F E D VSW A+I + ++G E
Sbjct: 408 AIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYET 467
Query: 497 IHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGC-MI 555
+ LF + + PD TF +L AC+ G + G + + K G + S GC +I
Sbjct: 468 LFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSG-MASNSSVGCSLI 524
Query: 556 DLLCRAGRLSDAENM 570
D+ + G + +AE +
Sbjct: 525 DMYSKCGMIEEAEKI 539
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 208/449 (46%), Gaps = 34/449 (7%)
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
R+VVS+ +T + + YF + + F+ V K A GAL G++
Sbjct: 12 RSVVSFNRCLTEKI-SYRRVPSFSYFTDFLNQVNSVSTTNFSFVFKECAKQGALELGKQA 70
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII--------- 282
H M+ GF +FV N L +Y+ + +F++M RDV+SW +I
Sbjct: 71 HAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 283 ----------------------TSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISAS 320
+ Y+Q GE + + FV M ++ + TFA I+
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 321 ANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWS 380
+ L G Q+H V+R+G + A++++ MY+K + + VF G+ ++ +SWS
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 250
Query: 381 TIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSI 440
II G Q A ++ M++ ++ +ASVL C ++ L G Q+HAH +
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKS 310
Query: 441 GLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLF 500
++++A ++MY+KC ++++A +F +E+ + S+ AMI GY++ + +A+ LF
Sbjct: 311 DFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLF 370
Query: 501 EKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCR 560
++ GL D ++ GV AC+ + G + L + K ID+ +
Sbjct: 371 HRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL-AIKSSLSLDVCVANAAIDMYGK 429
Query: 561 AGRLSDAENMIENMPHQKDDVVWSTLLRA 589
L++A + + M ++D V W+ ++ A
Sbjct: 430 CQALAEAFRVFDEM-RRRDAVSWNAIIAA 457
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K G LHD+R MF+ +RD ++W +I GY EA+ LF R+ +E N+ P ++
Sbjct: 650 KCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE---NIKPNHVT 706
Query: 113 L--ALKACALNVNVNYG-ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEM 169
L+ACA ++ G E + G + S ++D+ K GK++ + EM
Sbjct: 707 FISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREM 766
Query: 170 PLR-NVVSWTAII 181
P + V W ++
Sbjct: 767 PFEADDVIWRTLL 779
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 377 bits (967), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/580 (34%), Positives = 319/580 (55%), Gaps = 2/580 (0%)
Query: 100 VEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKI 159
VE + D L L ++ G+ +H +K G + V ++L++MY KL K
Sbjct: 307 VESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKF 366
Query: 160 ELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKAS 219
VFD M R+++SW ++I G+ + G E + F ++ R + D YT VLKA+
Sbjct: 367 GFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA 426
Query: 220 AD-SGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISW 278
+ L+ +++H +K SFV+ +L YS+ + + LFER + D+++W
Sbjct: 427 SSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAW 485
Query: 279 TTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLR 338
++ Y Q + F M + + +++T A + L I G+Q+HA+ ++
Sbjct: 486 NAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 339 LGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEY 398
G L V++ I+ MY KCG +++ F + D ++W+T+I G + G EE AF
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHV 605
Query: 399 LALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSK 458
+ MR G P+EF A++ + LEQG+QIHA+ + + + ++L++MY+K
Sbjct: 606 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAK 665
Query: 459 CGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGV 518
CGSI +A +F E +I +W AM+ G A+HG +E + LF+++ +G++PD VTF+GV
Sbjct: 666 CGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGV 725
Query: 519 LTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQK 578
L+ACSH+GLV + + M YG P EHY C+ D L RAG + AEN+IE+M +
Sbjct: 726 LSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA 785
Query: 579 DDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRK 638
++ TLL AC VQGD G+ A K+LEL P + ++ L+N+YAA +W E R
Sbjct: 786 SASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLART 845
Query: 639 MMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYR 678
MM+ V K+PG+S I+VK+++ FV DR + Q E IYR
Sbjct: 846 MMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/572 (26%), Positives = 268/572 (46%), Gaps = 47/572 (8%)
Query: 34 QLPVYVSTPE---VNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKA----M 86
++ + PE +N+ + K G L AR++FD M RD +SW ++++ Y ++ +
Sbjct: 64 RILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVV 123
Query: 87 DSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVG 146
++I+ L R+ + + LS LK C + V ES HGY K G FV
Sbjct: 124 ENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVA 183
Query: 147 SALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQ 206
AL+++Y K GK++ G +F+EMP R+VV W ++ + G +E + + S
Sbjct: 184 GALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLN 243
Query: 207 GDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRL 266
+ T ++ + S D V SF + A+
Sbjct: 244 PNEITLRLLARISGDDSDAG--------------QVKSFANGNDAS-------------- 275
Query: 267 FERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARI 326
S ++I ++ Y+ G+ F M ESDV+ ++ TF +++ + + +
Sbjct: 276 ----SVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSL 331
Query: 327 QWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGY 386
G+Q+H L+LGL L+V+NS++ MY K + VF M RD+ISW+++I G
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGI 391
Query: 387 SQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAI-LEQGKQIHAHVMSIGLERT 445
+Q G E EA + R G +P+++ SVL ++ L KQ+H H + I
Sbjct: 392 AQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSD 451
Query: 446 AMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPM 505
+ + +ALI+ YS+ +KEA +I +E + D+V+W AM+ GY + + + LF +
Sbjct: 452 SFVSTALIDAYSRNRCMKEA-EILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHK 510
Query: 506 VGLRPDSVTFMGVLTACSHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGR 563
G R D T V C ++ G H + + K G+ ++D+ + G
Sbjct: 511 QGERSDDFTLATVFKTCGFLFAINQGKQVHAYAI---KSGYDLDLWVSSGILDMYVKCGD 567
Query: 564 LSDAENMIENMPHQKDDVVWSTLLRACMVQGD 595
+S A+ +++P DDV W+T++ C+ G+
Sbjct: 568 MSAAQFAFDSIP-VPDDVAWTTMISGCIENGE 598
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/470 (27%), Positives = 246/470 (52%), Gaps = 13/470 (2%)
Query: 1 MLLQSTRHRVGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDA 60
+L+ +T +V L + C + L G L + VS +N K L K G+ A
Sbjct: 319 ILMLATAVKVDSLALGQQVHC-----MALKLGLDLMLTVSNSLINMYCK-LRKFGF---A 369
Query: 61 RKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKAC-A 119
R +FD M++RD ISW ++I+G + +EA+ LF ++ + + D + ++ LKA +
Sbjct: 370 RTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQL-LRCGLKPDQYTMTSVLKAASS 428
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
L ++ + +H + +K V+ FV +AL+D Y++ ++ +F+ ++V+W A
Sbjct: 429 LPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNA 487
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
++ G ++ + L FA M + E+ D +T A V K A+N G+++H +K G
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
+D+ +V++ + MY KCG + + F+ + D ++WTT+I+ ++ GEEE AF F
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
+M+ V P+E+T A + AS+ L ++ G Q+HA+ L+L + V S++ MY+KCG
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCG 667
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLS 419
+ +F + +I +W+ ++ G +Q G +E + M+ G +P++ F VLS
Sbjct: 668 SIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLS 727
Query: 420 VCGNMAILEQG-KQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
C + ++ + K + + G++ S L + + G +K+A +
Sbjct: 728 ACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENL 777
Score = 204 bits (520), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 149/605 (24%), Positives = 277/605 (45%), Gaps = 65/605 (10%)
Query: 52 VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFIL 111
+K G + + + +F+ M RD + W ++ Y++ EA+ L S ++P +
Sbjct: 191 LKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF---HSSGLNPNEI 247
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
+L L A + G G V S G+ D +
Sbjct: 248 TLRLLA-----------RISGDDSDAGQVKSFANGN-------------------DASSV 277
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREI 231
++ ++ + +G L FA+M S + D TF ++L + +L G+++
Sbjct: 278 SEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQV 337
Query: 232 HTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
H + LK G D++ V+NSL MY K K ++ +F+ MS RD+ISW ++I Q G E
Sbjct: 338 HCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLE 397
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLAR-IQWGEQLHAHVLRLGLVDSLSVANS 350
A F+++ +KP++YT +++ A+++L + +Q+H H +++ V V+ +
Sbjct: 398 VEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTA 457
Query: 351 IMAMYSKCGQLTSTSIVF--HGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPR 408
++ YS+ + I+F H D+++W+ ++ GY+Q + + ALM ++G R
Sbjct: 458 LIDAYSRNRCMKEAEILFERHNF---DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGER 514
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
++F A+V CG + + QGKQ+HA+ + G + + S +++MY KCG + A
Sbjct: 515 SDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFA 574
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGV------LTAC 522
F D V+WT MI+G E+G + A H+F ++ ++G+ PD T + LTA
Sbjct: 575 FDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTAL 634
Query: 523 SHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVV 582
+ N +D FV + ++D+ + G + DA + + + +
Sbjct: 635 EQGRQIHANALKLNCTNDP--FVGTS-----LVDMYAKCGSIDDAYCLFKRI-EMMNITA 686
Query: 583 WSTLLRACMVQGDVNCGRHTAE-----KILELHPSCAGTHITLANIYAAKGRWREAAEVR 637
W+ +L G+ G+ T + K L + P +T + +A +E
Sbjct: 687 WNAMLVGLAQHGE---GKETLQLFKQMKSLGIKPD----KVTFIGVLSACSHSGLVSEAY 739
Query: 638 KMMRS 642
K MRS
Sbjct: 740 KHMRS 744
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 329 GEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQ 388
G+ HA +L + N++++MYSKCG LT VF M RD++SW++I+ Y+Q
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 389 GG-----YEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLE 443
++AF ++R++ + + +L +C + + + H + IGL+
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLD 177
Query: 444 RTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKV 503
+ AL+N+Y K G +KE +F E D+V W M+ Y E G+ +EAI L
Sbjct: 178 GDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAF 237
Query: 504 PMVGLRPDSVTF 515
GL P+ +T
Sbjct: 238 HSSGLNPNEITL 249
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/377 (21%), Positives = 162/377 (42%), Gaps = 39/377 (10%)
Query: 216 LKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDV 275
L+ + S L G+ H +L + F+ N+L +MYSKCG L Y+ R+F++M RD+
Sbjct: 46 LRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDL 105
Query: 276 ISWTTIITSYVQMGEE-----ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGE 330
+SW +I+ +Y Q E + AF F +++ V + T + ++ + + E
Sbjct: 106 VSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASE 165
Query: 331 QLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGG 390
H + ++GL VA +++ +Y K G++ ++F M RD++ W+ ++ Y + G
Sbjct: 166 SFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMG 225
Query: 391 YEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKS 450
++EEA + + G PNE + + G+ + Q K
Sbjct: 226 FKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKS------------------ 267
Query: 451 ALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRP 510
++ S+I + + ++ Y G + F + +
Sbjct: 268 -----FANGNDASSVSEIIFRNKG---------LSEYLHSGQYSALLKCFADMVESDVEC 313
Query: 511 DSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENM 570
D VTF+ +L + LG + M+ K G +I++ C+ + A +
Sbjct: 314 DQVTFILMLATAVKVDSLALG-QQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTV 372
Query: 571 IENMPHQKDDVVWSTLL 587
+NM ++D + W++++
Sbjct: 373 FDNMS-ERDLISWNSVI 388
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 216/664 (32%), Positives = 353/664 (53%), Gaps = 70/664 (10%)
Query: 109 FILSLALKACALNVNVNYGESLHGYTVKTGF-VNSVFVGSALLDMYTKLGKIELGCRVFD 167
+ S+ L +NV G +LH + + + F + +L Y+K G ++ C FD
Sbjct: 45 LMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFD 104
Query: 168 EMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNF 227
++P R+ VSWT +I G G + + +M + + +T VL + A + +
Sbjct: 105 QLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMET 164
Query: 228 GREIHTIMLKRGFDVVSFVANSLATMYSKCG----------------------------- 258
G+++H+ ++K G V+NSL MY+KCG
Sbjct: 165 GKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQ 224
Query: 259 --KLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRM-QESDVKPNEYTFAA 315
++D ++ FE+M+ RD+++W ++I+ + Q G + A D F +M ++S + P+ +T A+
Sbjct: 225 VGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLAS 284
Query: 316 IISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG---------------- 359
++SA ANL ++ G+Q+H+H++ G S V N++++MYS+CG
Sbjct: 285 VLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKD 344
Query: 360 -----------------QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALM 402
+ +F + RD+++W+ +I GY Q G EA M
Sbjct: 345 LKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSM 404
Query: 403 RREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
G RPN + A++LSV ++A L GKQIH + G + + +ALI MY+K G+I
Sbjct: 405 VGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNI 464
Query: 463 KEASQIFYETESD-DIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTA 521
AS+ F + D VSWT+MI A+HG+++EA+ LFE + M GLRPD +T++GV +A
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSA 524
Query: 522 CSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV 581
C+HAGLV+ G YF++M D +P+ HY CM+DL RAG L +A+ IE MP + D V
Sbjct: 525 CTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVV 584
Query: 582 VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMR 641
W +LL AC V +++ G+ AE++L L P +G + LAN+Y+A G+W EAA++RK M+
Sbjct: 585 TWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMK 644
Query: 642 SKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLL---ASRESDIDDLDSLVH 698
V KE G+S I+VK +V F D H + +IY + + + + D S++H
Sbjct: 645 DGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLH 704
Query: 699 DAED 702
D E+
Sbjct: 705 DLEE 708
Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 158/557 (28%), Positives = 262/557 (47%), Gaps = 108/557 (19%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYV---KAMDSIEALALFSRVWVE 101
N+ L K G + + FD + QRD +SWTT+I GY + +I + + +E
Sbjct: 84 NTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIE 143
Query: 102 PQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTK------ 155
P F L+ L + A + G+ +H + VK G +V V ++LL+MY K
Sbjct: 144 PTQ----FTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMM 199
Query: 156 -------------------------LGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHN 190
+G+++L F++M R++V+W ++I+G + G++
Sbjct: 200 AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYD 259
Query: 191 KEGLIYFAEMWR-SKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANS 249
L F++M R S D +T A VL A A+ L G++IH+ ++ GFD+ V N+
Sbjct: 260 LRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 250 LATMYSKCGKLDYSLRLFERMST---------------------------------RDVI 276
L +MYS+CG ++ + RL E+ T RDV+
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 277 SWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHV 336
+WT +I Y Q G A + F M +PN YT AA++S +++LA + G+Q+H
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSA 439
Query: 337 LRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIR--RDIISWSTIIGGYSQGGYEEE 394
++ G + S+SV+N+++ MY+K G +TS S F +IR RD +SW+++I +Q G+ EE
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGNITSASRAF-DLIRCERDTVSWTSMIIALAQHGHAEE 498
Query: 395 AFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALIN 454
A E M EG RP+ + V S C + ++ QG+Q +
Sbjct: 499 ALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ-------------------YFD 539
Query: 455 MYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVT 514
M +K+ +I + + M++ + G QEA EK+P + PD VT
Sbjct: 540 M------MKDVDKII-----PTLSHYACMVDLFGRAGLLQEAQEFIEKMP---IEPDVVT 585
Query: 515 FMGVLTACSHAGLVDLG 531
+ +L+AC +DLG
Sbjct: 586 WGSLLSACRVHKNIDLG 602
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 209/458 (45%), Gaps = 68/458 (14%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N+ + ++ G + A F+ M +RD ++W ++ISG+ + + AL +FS++ + +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
+ D F L+ L ACA + G+ +H + V TGF S V +AL+ MY++ G +E R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 165 ---------------------------------VFDEMPLRNVVSWTAIITGLVRAGHNK 191
+F + R+VV+WTA+I G + G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 192 EGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLA 251
E + F M ++ +SYT A +L ++ +L+ G++IH +K G V+N+L
Sbjct: 396 EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALI 455
Query: 252 TMYSKCGKLDYSLRLFERMST-RDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNE 310
TMY+K G + + R F+ + RD +SWT++I + Q G E A + F M ++P+
Sbjct: 456 TMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDH 515
Query: 311 YTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHG 370
T+ + SA + + G Q D + + I+ S
Sbjct: 516 ITYVGVFSACTHAGLVNQGRQ---------YFDMMKDVDKIIPTLSH------------- 553
Query: 371 MIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQG 430
++ ++ + + G +EA E++ M E P+ + S+LS C ++ G
Sbjct: 554 --------YACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLSACRVHKNIDLG 602
Query: 431 KQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
K ++ + E + SAL N+YS CG +EA++I
Sbjct: 603 KVAAERLLLLEPENSGAY-SALANLYSACGKWEEAAKI 639
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 409 PNEFAFASVLSVCGNMAILEQGKQ--------IHAHVMSIGLERTAMIKSALINMYSKCG 460
P + +++L +C N+ K +H V+ GL + + + L+N+YSK G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 461 SIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLT 520
A ++F E SW +++ Y++ G F+++P + DSV++ ++
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLP----QRDSVSWTTMIV 119
Query: 521 ACSHAG 526
+ G
Sbjct: 120 GYKNIG 125
>sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protein At4g35130,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H27 PE=3
SV=1
Length = 804
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/660 (30%), Positives = 347/660 (52%), Gaps = 7/660 (1%)
Query: 27 LLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAM 86
L+L ++ V+ P + L+ S + DA ++FD M + D W +I G+
Sbjct: 50 LVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG 109
Query: 87 DSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVG 146
IEA+ +SR+ V + D F +K+ A ++ G+ +H +K GFV+ V+V
Sbjct: 110 LYIEAVQFYSRM-VFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 147 SALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQ 206
++L+ +Y KLG +VF+EMP R++VSW ++I+G + G L+ F EM + +
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFK 228
Query: 207 GDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVS-FVANSLATMYSKCGKLDYSLR 265
D ++ L A + + G+EIH ++ + V S+ MYSK G++ Y+ R
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 266 LFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESD-VKPNEYTFAAIISASANLA 324
+F M R++++W +I Y + G +AF F +M E + ++P+ T ++ ASA L
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE 348
Query: 325 RIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIG 384
G +H + +R G + + + +++ MY +CGQL S ++F M +++ISW++II
Sbjct: 349 ----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIA 404
Query: 385 GYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLER 444
Y Q G A E + P+ AS+L L +G++IHA+++
Sbjct: 405 AYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWS 464
Query: 445 TAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVP 504
+I ++L++MY+ CG +++A + F D+VSW ++I YA HG+ + ++ LF ++
Sbjct: 465 NTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMI 524
Query: 505 MVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRL 564
+ P+ TF +L ACS +G+VD G+ YF M +YG P EHYGCM+DL+ R G
Sbjct: 525 ASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 565 SDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIY 624
S A+ +E MP +W +LL A D+ AE+I ++ G ++ L N+Y
Sbjct: 585 SAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMY 644
Query: 625 AAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLA 684
A GRW + ++ +M SKG+ + S ++ K + F + DR H IY +LD+++
Sbjct: 645 AEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVS 704
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/562 (34%), Positives = 324/562 (57%), Gaps = 8/562 (1%)
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
L+ C + G +H Y +K+G ++ + L+DMY K + + +VFD MP RNV
Sbjct: 13 LRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNV 72
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
VSW+A+++G V G K L F+EM R + +TF+ LKA AL G +IH
Sbjct: 73 VSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGF 132
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
LK GF+++ V NSL MYSKCG+++ + ++F R+ R +ISW +I +V G A
Sbjct: 133 CLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKA 192
Query: 295 FDAFVRMQESDVK--PNEYTFAAIISASANLARIQWGEQLHAHVLRLGL--VDSLSVANS 350
D F MQE+++K P+E+T +++ A ++ I G+Q+H ++R G S ++ S
Sbjct: 193 LDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGS 252
Query: 351 IMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPN 410
++ +Y KCG L S F + + +ISWS++I GY+Q G EA ++ + +
Sbjct: 253 LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQID 312
Query: 411 EFAFASVLSVCGNMAILEQGKQIHAHVMSI--GLERTAMIKSALINMYSKCGSIKEASQI 468
FA +S++ V + A+L QGKQ+ A + + GLE + + +++++MY KCG + EA +
Sbjct: 313 SFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKC 370
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F E + D++SWT +I GY +HG ++++ +F ++ + PD V ++ VL+ACSH+G++
Sbjct: 371 FAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMI 430
Query: 529 DLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLR 588
G F+ + + +G P EHY C++DLL RAGRL +A+++I+ MP + + +W TLL
Sbjct: 431 KEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLS 490
Query: 589 ACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKE 648
C V GD+ G+ + +L + ++ ++N+Y G W E R++ KG+ KE
Sbjct: 491 LCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE 550
Query: 649 PGWSRIKVKDQVSAFVSSDRRH 670
G S ++++ +V F S + H
Sbjct: 551 AGMSWVEIEREVHFFRSGEDSH 572
Score = 237 bits (604), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 156/511 (30%), Positives = 271/511 (53%), Gaps = 32/511 (6%)
Query: 21 CTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHD----------ARKMFDTMTQR 70
CT R L QG Q+ Y+ S L +L+ S YL D A K+FD+M +R
Sbjct: 16 CT--RKGLSDQGGQVHCYLLKS--GSGL-NLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 71 DEISWTTLISGYVKAMDSIEALALFS---RVWVEPQMNMDPFILSLALKACALNVNVNYG 127
+ +SW+ L+SG+V D +L+LFS R + P + F S LKAC L + G
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP----NEFTFSTNLKACGLLNALEKG 126
Query: 128 ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRA 187
+HG+ +K GF V VG++L+DMY+K G+I +VF + R+++SW A+I G V A
Sbjct: 127 LQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHA 186
Query: 188 GHNKEGLIYFAEMWRS--KEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVS- 244
G+ + L F M + KE+ D +T +LKA + +G + G++IH +++ GF S
Sbjct: 187 GYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSS 246
Query: 245 -FVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQE 303
+ SL +Y KCG L + + F+++ + +ISW+++I Y Q GE A F R+QE
Sbjct: 247 ATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQE 306
Query: 304 SDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTS 363
+ + + + ++II A+ A ++ G+Q+ A ++L SV NS++ MY KCG +
Sbjct: 307 LNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDE 366
Query: 364 TSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGN 423
F M +D+ISW+ +I GY + G +++ M R P+E + +VLS C +
Sbjct: 367 AEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSH 426
Query: 424 MAILEQGKQIHAHVMSI-GLERTAMIKSALINMYSKCGSIKEASQIFYETE-SDDIVSWT 481
++++G+++ + ++ G++ + ++++ + G +KEA + ++ W
Sbjct: 427 SGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQ 486
Query: 482 AMINGYAEHGYSQEAIHLFEKVPMVGLRPDS 512
+++ HG I L ++V + LR D+
Sbjct: 487 TLLSLCRVHG----DIELGKEVGKILLRIDA 513
Score = 187 bits (474), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/380 (27%), Positives = 194/380 (51%), Gaps = 12/380 (3%)
Query: 215 VLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRD 274
+L+ G + G ++H +LK G + +N L MY KC + + ++F+ M R+
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 275 VISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHA 334
V+SW+ +++ +V G+ + + F M + PNE+TF+ + A L ++ G Q+H
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHG 131
Query: 335 HVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEE 394
L++G + V NS++ MYSKCG++ VF ++ R +ISW+ +I G+ GY +
Sbjct: 132 FCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSK 191
Query: 395 AFEYLALMRREG--PRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLE--RTAMIKS 450
A + +M+ RP+EF S+L C + ++ GKQIH ++ G +A I
Sbjct: 192 ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITG 251
Query: 451 ALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRP 510
+L+++Y KCG + A + F + + ++SW+++I GYA+ G EA+ LF+++ + +
Sbjct: 252 SLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQI 311
Query: 511 DSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCM---IDLLCRAGRLSDA 567
DS ++ + L+ G L +PS + +D+ + G + +A
Sbjct: 312 DSFALSSIIGVFADFALLRQGKQMQALAVK----LPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 568 ENMIENMPHQKDDVVWSTLL 587
E M KD + W+ ++
Sbjct: 368 EKCFAEM-QLKDVISWTVVI 386
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 123/288 (42%), Gaps = 48/288 (16%)
Query: 409 PNEFA-FASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQ 467
PN+ S+L VC + +QG Q+H +++ G + + LI+MY KC A +
Sbjct: 3 PNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYK 62
Query: 468 IFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGL 527
+F ++VSW+A+++G+ +G + ++ LF ++ G+ P+ TF L AC
Sbjct: 63 VFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNA 122
Query: 528 VDLGF--HYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIE------------- 572
++ G H F L K GF E ++D+ + GR+++AE +
Sbjct: 123 LEKGLQIHGFCL---KIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAM 179
Query: 573 -----------------------NMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILE- 608
N+ + D+ ++LL+AC G + G+ ++
Sbjct: 180 IAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 609 -LH-PSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRI 654
H PS A +L ++Y G A + ++ K +I WS +
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS---WSSL 284
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 14 FASSAIACTERRPLLLFQGTQ-------LPVYVSTPEVNSQLKHLVKSGYLHDARKMFDT 66
FA S+I LL QG Q LP + T +NS + +K G + +A K F
Sbjct: 314 FALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAE 373
Query: 67 MTQRDEISWTTLISGYVKAMDSIEALALFSRVW---VEPQMNMDPFILSLALKACALNVN 123
M +D ISWT +I+GY K +++ +F + +EP D L AC+ +
Sbjct: 374 MQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEP----DEVCYLAVLSACSHSGM 429
Query: 124 VNYGESLHGYTVKT-GFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR-NVVSWTAII 181
+ GE L ++T G V + ++D+ + G+++ + D MP++ NV W ++
Sbjct: 430 IKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLL 489
Query: 182 T 182
+
Sbjct: 490 S 490
>sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containing protein At3g01580
OS=Arabidopsis thaliana GN=PCMP-E87 PE=3 SV=2
Length = 660
Score = 372 bits (955), Expect = e-102, Method: Compositional matrix adjust.
Identities = 205/647 (31%), Positives = 340/647 (52%), Gaps = 13/647 (2%)
Query: 59 DARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKAC 118
DAR+MF MT+R W TL+ + E L FS ++ + + D F L +ALKAC
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEE-KPDNFTLPVALKAC 70
Query: 119 ALNVNVNYGESLHGYTVKTGFVNS-VFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSW 177
VNYGE +HG+ K + S ++VGS+L+ MY K G++ R+FDE+ ++V+W
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 178 TAIITGLVRAGHNKEGLIYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFGREIHTIML 236
+++++G + G + + +F M + + D T ++ A GR +H ++
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 237 KRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFD 296
+RGF + NSL Y+K ++ LF+ ++ +DVISW+T+I YVQ G A
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 297 AFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYS 356
F M + +PN T ++ A A ++ G + H +R GL + V+ +++ MY
Sbjct: 251 VFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYM 310
Query: 357 KCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREG-PRPNEFAFA 415
KC VF + R+D++SW +I G++ G + E ++M E RP+
Sbjct: 311 KCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMV 370
Query: 416 SVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESD 475
VL C + LEQ K H++V+ G + I ++L+ +YS+CGS+ AS++F
Sbjct: 371 KVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK 430
Query: 476 DIVSWTAMINGYAEHGYSQEAIHLFEK-VPMVGLRPDSVTFMGVLTACSHAGLVDLGFHY 534
D V WT++I GY HG +A+ F V ++P+ VTF+ +L+ACSHAGL+ G
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRI 490
Query: 535 FNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQG 594
F LM + Y P+ EHY ++DLL R G L A + + MP + TLL AC +
Sbjct: 491 FKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQ 550
Query: 595 DVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRI 654
+ A+K+ EL + AG ++ ++N+Y KG W ++R ++ +G+ K S I
Sbjct: 551 NGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLI 610
Query: 655 KVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDI---DDLDSLVH 698
+++ +V FV+ D H + E +Y +L +E D+ +DL++ V+
Sbjct: 611 EIRRKVHRFVADDELHPEKEPVYGLL-----KELDLHMKEDLENCVY 652
Score = 196 bits (499), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 225/433 (51%), Gaps = 12/433 (2%)
Query: 44 VNSQLKHL-VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEP 102
V S L ++ +K G + +A +MFD + + D ++W++++SG+ K +A+ F R+ +
Sbjct: 98 VGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMAS 157
Query: 103 QMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELG 162
+ D L + AC N G +HG+ ++ GF N + + ++LL+ Y K +
Sbjct: 158 DVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEA 217
Query: 163 CRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADS 222
+F + ++V+SW+ +I V+ G E L+ F +M + + T VL+A A +
Sbjct: 218 VNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAA 277
Query: 223 GALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII 282
L GR+ H + +++G + V+ +L MY KC + + +F R+ +DV+SW +I
Sbjct: 278 HDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALI 337
Query: 283 TSYVQMGEEENAFDAF-VRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL 341
+ + G + + F + + E++ +P+ ++ + + L ++ + H++V++ G
Sbjct: 338 SGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGF 397
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
+ + S++ +YS+CG L + S VF+G+ +D + W+++I GY G +A E
Sbjct: 398 DSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNH 457
Query: 402 MRREGP-RPNEFAFASVLSVCGNMAILEQGKQI-----HAHVMSIGLERTAMIKSALINM 455
M + +PNE F S+LS C + ++ +G +I + + ++ LE A+ L+++
Sbjct: 458 MVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAV----LVDL 513
Query: 456 YSKCGSIKEASQI 468
+ G + A +I
Sbjct: 514 LGRVGDLDTAIEI 526
Score = 33.9 bits (76), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 15/137 (10%)
Query: 458 KCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMG 517
K S +A Q+F E + W ++ + +E ++ F + +PD+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 518 VLTACSHAGLVDLG--FHYF-----NLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENM 570
L AC V+ G H F L SD Y V S +I + + GR+ +A M
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLY--VGSS-----LIYMYIKCGRMIEALRM 118
Query: 571 IENMPHQKDDVVWSTLL 587
+ + + D V WS+++
Sbjct: 119 FDEL-EKPDIVTWSSMV 134
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 371 bits (952), Expect = e-101, Method: Compositional matrix adjust.
Identities = 213/670 (31%), Positives = 351/670 (52%), Gaps = 22/670 (3%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K G K+FD +++R+++SW +LIS AL F R ++ + F L
Sbjct: 145 KCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF-RCMLDENVEPSSFTLV 203
Query: 113 LALKACA---LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEM 169
+ AC+ + + G+ +H Y ++ G +NS F+ + L+ MY KLGK+ +
Sbjct: 204 SVVTACSNLPMPEGLMMGKQVHAYGLRKGELNS-FIINTLVAMYGKLGKLASSKVLLGSF 262
Query: 170 PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGR 229
R++V+W +++ L + E L Y EM + D +T + VL A + L G+
Sbjct: 263 GGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGK 322
Query: 230 EIHTIMLKRG-FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
E+H LK G D SFV ++L MY C ++ R+F+ M R + W +I Y Q
Sbjct: 323 ELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQN 382
Query: 289 GEEENAFDAFVRMQES-DVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSV 347
++ A F+ M+ES + N T A ++ A E +H V++ GL V
Sbjct: 383 EHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFV 442
Query: 348 ANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMR---- 403
N++M MYS+ G++ +F M RD+++W+T+I GY + E+A L M+
Sbjct: 443 QNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLER 502
Query: 404 -------REGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMY 456
R +PN ++L C ++ L +GK+IHA+ + L + SAL++MY
Sbjct: 503 KVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMY 562
Query: 457 SKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFM 516
+KCG ++ + ++F + ++++W +I Y HG QEAI L + + G++P+ VTF+
Sbjct: 563 AKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 517 GVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPH 576
V ACSH+G+VD G F +M YG PS +HY C++DLL RAGR+ +A ++ MP
Sbjct: 623 SVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPR 682
Query: 577 QKDDV-VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAE 635
+ WS+LL A + ++ G A+ +++L P+ A ++ LANIY++ G W +A E
Sbjct: 683 DFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATE 742
Query: 636 VRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASR---ESDIDD 692
VR+ M+ +GV KEPG S I+ D+V FV+ D H Q E + L+ L R E + D
Sbjct: 743 VRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPD 802
Query: 693 LDSLVHDAED 702
++H+ E+
Sbjct: 803 TSCVLHNVEE 812
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/501 (30%), Positives = 263/501 (52%), Gaps = 26/501 (5%)
Query: 14 FASSAIACTE-RRPLLLFQGTQLPVY-VSTPEVNSQLKHLV-----KSGYLHDARKMFDT 66
S AC+ P L G Q+ Y + E+NS + + + K G L ++ + +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGS 261
Query: 67 MTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNY 126
RD ++W T++S + +EAL + +E + D F +S L AC+ +
Sbjct: 262 FGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRT 320
Query: 127 GESLHGYTVKTGFVN-SVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLV 185
G+ LH Y +K G ++ + FVGSAL+DMY ++ G RVFD M R + W A+I G
Sbjct: 321 GKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYS 380
Query: 186 RAGHNKEGLIYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVS 244
+ H+KE L+ F M S +S T A V+ A SGA + IH ++KRG D
Sbjct: 381 QNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDR 440
Query: 245 FVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQES 304
FV N+L MYS+ GK+D ++R+F +M RD+++W T+IT YV E+A +MQ
Sbjct: 441 FVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNL 500
Query: 305 D-----------VKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMA 353
+ +KPN T I+ + A L+ + G+++HA+ ++ L ++V ++++
Sbjct: 501 ERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVD 560
Query: 354 MYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFA 413
MY+KCG L + VF + ++++I+W+ II Y G +EA + L +M +G +PNE
Sbjct: 561 MYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVT 620
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMS--IGLERTAMIKSALINMYSKCGSIKEASQIFYE 471
F SV + C + ++++G +I +VM G+E ++ + ++++ + G IKEA Q+
Sbjct: 621 FISVFAACSHSGMVDEGLRIF-YVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 679
Query: 472 TESD--DIVSWTAMINGYAEH 490
D +W++++ H
Sbjct: 680 MPRDFNKAGAWSSLLGASRIH 700
Score = 223 bits (568), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 144/508 (28%), Positives = 257/508 (50%), Gaps = 24/508 (4%)
Query: 107 DPFILSLALKACALNVNVNYGESLHGYTVKTGF-VNSVFVGSALLDMYTKLGKIELGCRV 165
D + LKA A ++ G+ +H + K G+ V+SV V + L+++Y K G +V
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 166 FDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASAD---S 222
FD + RN VSW ++I+ L + L F M + S+T V+ A ++
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 223 GALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII 282
L G+++H L++G ++ SF+ N+L MY K GKL S L RD+++W T++
Sbjct: 216 EGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVL 274
Query: 283 TSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLV 342
+S Q + A + M V+P+E+T ++++ A ++L ++ G++LHA+ L+ G +
Sbjct: 275 SSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSL 334
Query: 343 DSLS-VANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEA-FEYLA 400
D S V ++++ MY C Q+ S VF GM R I W+ +I GYSQ +++EA ++
Sbjct: 335 DENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIG 394
Query: 401 LMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCG 460
+ G N A V+ C + + IH V+ GL+R +++ L++MYS+ G
Sbjct: 395 MEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLG 454
Query: 461 SIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKV-----------PMVGLR 509
I A +IF + E D+V+W MI GY + ++A+ L K+ V L+
Sbjct: 455 KIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLK 514
Query: 510 PDSVTFMGVLTACSHAGLVDLG--FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDA 567
P+S+T M +L +C+ + G H + + K ++D+ + G L +
Sbjct: 515 PNSITLMTILPSCAALSALAKGKEIHAYAI---KNNLATDVAVGSALVDMYAKCGCLQMS 571
Query: 568 ENMIENMPHQKDDVVWSTLLRACMVQGD 595
+ + +P QK+ + W+ ++ A + G+
Sbjct: 572 RKVFDQIP-QKNVITWNVIIMAYGMHGN 598
Score = 220 bits (561), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 137/442 (30%), Positives = 236/442 (53%), Gaps = 19/442 (4%)
Query: 177 WTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIML 236
W ++ VR+ +E ++ + +M + D+Y F +LKA AD + G++IH +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 237 KRGFDVVSF-VANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAF 295
K G+ V S VAN+L +Y KCG ++F+R+S R+ +SW ++I+S + E A
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 296 DAFVRMQESDVKPNEYTFAAIISASANLAR---IQWGEQLHAHVLRLGLVDSLSVANSIM 352
+AF M + +V+P+ +T ++++A +NL + G+Q+HA+ LR G ++S + N+++
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSF-IINTLV 243
Query: 353 AMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEF 412
AMY K G+L S+ ++ RD+++W+T++ Q EA EYL M EG P+EF
Sbjct: 244 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 413 AFASVLSVCGNMAILEQGKQIHAHVMSIG-LERTAMIKSALINMYSKCGSIKEASQIFYE 471
+SVL C ++ +L GK++HA+ + G L+ + + SAL++MY C + ++F
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 363
Query: 472 TESDDIVSWTAMINGYAEHGYSQEAIHLFEKV-PMVGLRPDSVTFMGVLTACSHAGLVDL 530
I W AMI GY+++ + +EA+ LF + GL +S T GV+ AC +G
Sbjct: 364 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 423
Query: 531 --GFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLR 588
H F + K G + ++D+ R G++ A + M +D V W+T
Sbjct: 424 KEAIHGFVV---KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKM-EDRDLVTWNT--- 476
Query: 589 ACMVQGDVNCGRHTAEKILELH 610
M+ G V H + +L LH
Sbjct: 477 --MITGYV-FSEHHEDALLLLH 495
>sp|Q9FLZ9|PP405_ARATH Pentatricopeptide repeat-containing protein At5g39350
OS=Arabidopsis thaliana GN=PCMP-E16 PE=2 SV=1
Length = 677
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 208/616 (33%), Positives = 324/616 (52%), Gaps = 17/616 (2%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVE-----PQMNMDPF 109
G++ ARK+F+ M Q +S+ +I YV+ +A+++F R+ E P PF
Sbjct: 63 GHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPF 122
Query: 110 ILSLA--LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFD 167
+ A LK+ L G +HG +++ F +V +ALL MY GK+E+ VFD
Sbjct: 123 VAKAAGELKSMKL------GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFD 176
Query: 168 EMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNF 227
M R+V+SW +I+G R G+ + L+ F M D T +L L
Sbjct: 177 VMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 228 GREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQ 287
GR +H ++ ++ V N+L MY KCG++D + +F+RM RDVI+WT +I Y +
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTE 296
Query: 288 MGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSV 347
G+ ENA + MQ V+PN T A+++S + ++ G+ LH +R + + +
Sbjct: 297 DGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIII 356
Query: 348 ANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGP 407
S+++MY+KC ++ VF G + WS II G Q +A MRRE
Sbjct: 357 ETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDV 416
Query: 408 RPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQ 467
PN S+L +A L Q IH ++ G + + L+++YSKCG+++ A +
Sbjct: 417 EPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHK 476
Query: 468 IFY----ETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACS 523
IF + +S D+V W A+I+GY HG A+ +F ++ G+ P+ +TF L ACS
Sbjct: 477 IFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACS 536
Query: 524 HAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVW 583
H+GLV+ G F M + Y + HY C++DLL RAGRL +A N+I +P + VW
Sbjct: 537 HSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVW 596
Query: 584 STLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSK 643
LL AC+ +V G A K+ EL P G ++ LANIYAA GRW++ +VR MM +
Sbjct: 597 GALLAACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENV 656
Query: 644 GVIKEPGWSRIKVKDQ 659
G+ K+PG S I+++
Sbjct: 657 GLRKKPGHSTIEIRSN 672
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/475 (27%), Positives = 225/475 (47%), Gaps = 21/475 (4%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVW-VEPQ 103
N+ L + G + AR +FD M RD ISW T+ISGY + +AL +F W V
Sbjct: 156 NALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFD--WMVNES 213
Query: 104 MNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGC 163
+++D + L C ++ G ++H + + + V +AL++MY K G+++
Sbjct: 214 VDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEAR 273
Query: 164 RVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSG 223
VFD M R+V++WT +I G G + L M + ++ T A ++ D+
Sbjct: 274 FVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDAL 333
Query: 224 ALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIIT 283
+N G+ +H +++ + SL +MY+KC ++D R+F S W+ II
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIA 393
Query: 284 SYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVD 343
VQ +A F RM+ DV+PN T +++ A A LA ++ +H ++ + G +
Sbjct: 394 GCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMS 453
Query: 344 SLSVANSIMAMYSKCGQLTSTSIVFHGMIR----RDIISWSTIIGGYSQGGYEEEAFEYL 399
SL A ++ +YSKCG L S +F+G+ +D++ W +I GY G A +
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVF 513
Query: 400 ALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMS--IGLERTAMIKSALINMYS 457
M R G PNE F S L+ C + ++E+G + ++ L R+ + ++++
Sbjct: 514 MEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHY-TCIVDLLG 572
Query: 458 KCGSIKEA----SQIFYETESDDIVSWTAMINGYAEHGYSQ----EAIHLFEKVP 504
+ G + EA + I +E S W A++ H Q A LFE P
Sbjct: 573 RAGRLDEAYNLITTIPFEPTS---TVWGALLAACVTHENVQLGEMAANKLFELEP 624
Score = 181 bits (460), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 156/295 (52%), Gaps = 2/295 (0%)
Query: 239 GFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAF 298
G V + ++L+ Y+ CG + Y+ +LFE M ++S+ +I YV+ G +A F
Sbjct: 44 GGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVF 103
Query: 299 VRMQESDVK--PNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYS 356
+RM VK P+ YT+ + A+ L ++ G +H +LR V N+++AMY
Sbjct: 104 IRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYM 163
Query: 357 KCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFAS 416
G++ VF M RD+ISW+T+I GY + GY +A M E + S
Sbjct: 164 NFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVS 223
Query: 417 VLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDD 476
+L VCG++ LE G+ +H V L +K+AL+NMY KCG + EA +F E D
Sbjct: 224 MLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRD 283
Query: 477 IVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
+++WT MINGY E G + A+ L + G+RP++VT +++ C A V+ G
Sbjct: 284 VITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
>sp|Q9LIE7|PP246_ARATH Pentatricopeptide repeat-containing protein At3g22150,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-E95 PE=2
SV=1
Length = 820
Score = 370 bits (951), Expect = e-101, Method: Compositional matrix adjust.
Identities = 212/636 (33%), Positives = 349/636 (54%), Gaps = 18/636 (2%)
Query: 61 RKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFS---RVWVEPQMNMDPFILSLALKA 117
RK+FD M +++ ++W TLIS YVK + EA F R+ V+P P A
Sbjct: 168 RKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKP----SPVSFVNVFPA 223
Query: 118 CALNVNVNYGESLHGYTVKTG--FVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVV 175
+++ ++ +G +K G +V +FV S+ + MY +LG IE RVFD RN+
Sbjct: 224 VSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIE 283
Query: 176 SWTAIITGLVRAGHNKEGLIYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFGREIHTI 234
W +I V+ E + F E SKE D T+ + A + + GR+ H
Sbjct: 284 VWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGF 343
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
+ K ++ + NSL MYS+CG + S +F M RDV+SW T+I+++VQ G ++
Sbjct: 344 VSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEG 403
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANS-IMA 353
MQ+ K + T A++SA++NL + G+Q HA ++R G+ NS ++
Sbjct: 404 LMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGI--QFEGMNSYLID 461
Query: 354 MYSKCGQLTSTSIVFHG--MIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNE 411
MYSK G + + +F G RD +W+++I GY+Q G+ E+ F M + RPN
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 412 FAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYE 471
AS+L C + ++ GKQ+H + L++ + SAL++MYSK G+IK A +F +
Sbjct: 522 VTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQ 581
Query: 472 TESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
T+ + V++T MI GY +HG + AI LF + G++PD++TF+ VL+ACS++GL+D G
Sbjct: 582 TKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEG 641
Query: 532 FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV-VWSTLLRAC 590
F M + Y PS EHY C+ D+L R GR+++A ++ + + + +W +LL +C
Sbjct: 642 LKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSC 701
Query: 591 MVQGDVNCGRHTAEKILELH--PSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKE 648
+ G++ +E++ + + +G + L+N+YA + +W+ +VR+ MR KG+ KE
Sbjct: 702 KLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKE 761
Query: 649 PGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLA 684
G S I++ V+ FVS D+ H +IY ++D LA
Sbjct: 762 VGRSGIEIAGYVNCFVSRDQEHPHSSEIYDVIDGLA 797
Score = 258 bits (659), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 165/563 (29%), Positives = 298/563 (52%), Gaps = 23/563 (4%)
Query: 41 TPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRV-W 99
TP + S+L + + G AR++FD + + + W T+I G++ EAL +SR+
Sbjct: 39 TPSIRSRLSKICQDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKK 98
Query: 100 VEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTK---- 155
P N D + S LKACA N+ G+++H + ++ +S V ++L++MY
Sbjct: 99 TAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNA 158
Query: 156 --LGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFA 213
+ ++ +VFD M +NVV+W +I+ V+ G N E F M R + + +F
Sbjct: 159 PDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFV 218
Query: 214 IVLKASADSGALNFGREIHTIMLKRGFDVVS--FVANSLATMYSKCGKLDYSLRLFERMS 271
V A + S ++ + +MLK G + V FV +S +MY++ G ++ S R+F+
Sbjct: 219 NVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCV 278
Query: 272 TRDVISWTTIITSYVQMGEEENAFDAFVR-MQESDVKPNEYTFAAIISASANLARIQWGE 330
R++ W T+I YVQ + + F+ + ++ +E T+ SA + L +++ G
Sbjct: 279 ERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGR 338
Query: 331 QLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGG 390
Q H V + + + NS+M MYS+CG + + VF M RD++SW+T+I + Q G
Sbjct: 339 QFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNG 398
Query: 391 YEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKS 450
++E + M+++G + + ++LS N+ E GKQ HA ++ G++ M S
Sbjct: 399 LDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NS 457
Query: 451 ALINMYSKCGSIKEASQIFYET--ESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGL 508
LI+MYSK G I+ + ++F + D +W +MI+GY ++G++++ +F K+ +
Sbjct: 458 YLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNI 517
Query: 509 RPDSVTFMGVLTACSHAGLVDLG--FHYFNLMS--DKYGFVPSKEHYGCMIDLLCRAGRL 564
RP++VT +L ACS G VDLG H F++ D+ FV S ++D+ +AG +
Sbjct: 518 RPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVAS-----ALVDMYSKAGAI 572
Query: 565 SDAENMIENMPHQKDDVVWSTLL 587
AE+M + +++ V ++T++
Sbjct: 573 KYAEDMF-SQTKERNSVTYTTMI 594
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 214/425 (50%), Gaps = 4/425 (0%)
Query: 44 VNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQ 103
V+S + + G + +R++FD+ +R+ W T+I YV+ +E++ LF +
Sbjct: 254 VSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKE 313
Query: 104 MNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGC 163
+ D LA A + V G HG+ K + + ++L+ MY++ G +
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSF 373
Query: 164 RVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSG 223
VF M R+VVSW +I+ V+ G + EGL+ EM + + D T +L A+++
Sbjct: 374 GVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLR 433
Query: 224 ALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFE--RMSTRDVISWTTI 281
G++ H ++++G + + L MYSK G + S +LFE + RD +W ++
Sbjct: 434 NKEIGKQTHAFLIRQGIQFEG-MNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSM 492
Query: 282 ITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL 341
I+ Y Q G E F F +M E +++PN T A+I+ A + + + G+QLH +R L
Sbjct: 493 ISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYL 552
Query: 342 VDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLAL 401
++ VA++++ MYSK G + +F R+ ++++T+I GY Q G E A
Sbjct: 553 DQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLS 612
Query: 402 MRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSI-GLERTAMIKSALINMYSKCG 460
M+ G +P+ F +VLS C ++++G +I + + ++ ++ + +M + G
Sbjct: 613 MQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVG 672
Query: 461 SIKEA 465
+ EA
Sbjct: 673 RVNEA 677
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 125/495 (25%), Positives = 232/495 (46%), Gaps = 42/495 (8%)
Query: 157 GKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKE--QGDSYTFAI 214
G +L ++FD +P V W II G + E L++++ M ++ D+YT++
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 215 VLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMY------SKCGKLDYSLRLFE 268
LKA A++ L G+ +H +++ + V NSL MY C + D ++F+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 269 RMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQW 328
M ++V++W T+I+ YV+ G A F M +VKP+ +F + A + I+
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 329 GEQLHAHVLRLG--LVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGY 386
+ +L+LG V L V +S ++MY++ G + S+ VF + R+I W+T+IG Y
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 387 SQGGYEEEAFE-YLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERT 445
Q E+ E +L + + +E + S + +E G+Q H V E
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 446 AMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPM 505
+I ++L+ MYS+CGS+ ++ +F D+VSW MI+ + ++G E + L ++
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 506 VGLRPDSVTFMGVLTACS-----------HAGLVDLGFHYFNLMSDKYGFVPSKEHYGCM 554
G + D +T +L+A S HA L+ G + + S +
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNS-------------YL 459
Query: 555 IDLLCRAGRLSDAENMIENMPH-QKDDVVWSTLLRACMVQGDVNCGRHTAEKILE--LHP 611
ID+ ++G + ++ + E + ++D W++++ G K+LE + P
Sbjct: 460 IDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRP 519
Query: 612 SCAGTHITLANIYAA 626
+ +T+A+I A
Sbjct: 520 NA----VTVASILPA 530
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 200/596 (33%), Positives = 318/596 (53%), Gaps = 36/596 (6%)
Query: 142 SVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMW 201
++F + LL Y+K G I F+++P R+ V+W +I G +G + + M
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 202 RSKEQG-DSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSK---- 256
R T +LK S+ +G ++ G++IH ++K GF+ V + L MY+
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCI 190
Query: 257 ---------------------------CGKLDYSLRLFERMSTRDVISWTTIITSYVQMG 289
CG ++ +L+LF M +D +SW +I Q G
Sbjct: 191 SDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNG 249
Query: 290 EEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
+ A + F M+ +K ++Y F +++ A L I G+Q+HA ++R D + V +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
+++ MY KC L VF M +++++SW+ ++ GY Q G EEA + M+R G P
Sbjct: 310 ALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDP 369
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
+ + +S C N++ LE+G Q H ++ GL + ++L+ +Y KCG I +++++F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
E D VSWTAM++ YA+ G + E I LF+K+ GL+PD VT GV++ACS AGLV+
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 530 LGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRA 589
G YF LM+ +YG VPS HY CMIDL R+GRL +A I MP D + W+TLL A
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 590 CMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEP 649
C +G++ G+ AE ++EL P + L++IYA+KG+W A++R+ MR K V KEP
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 650 GWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESD---IDDLDSLVHDAED 702
G S IK K ++ +F + D + IY L+ L ++ D D + HD E+
Sbjct: 610 GQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEE 665
Score = 36.2 bits (82), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 431 KQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEH 490
K IH +++ + + +++ Y+ S A ++F ++ SW ++ Y++
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 491 GYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLM 538
G E FEK+P D VT+ ++ S +GLV +N M
Sbjct: 86 GLISEMESTFEKLP----DRDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 206/573 (35%), Positives = 307/573 (53%), Gaps = 3/573 (0%)
Query: 111 LSLALKACALNVNVNYGESLHGYTVKT-GFVNSVFVGSALLDMYTKLGKIELGCRVFDEM 169
L L LK ++ G +H VKT F+ + L++MY+KL E V
Sbjct: 9 LGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 170 PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGR 229
P RNVVSWT++I+GL + GH L+ F EM R + +TF KA A G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 230 EIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMG 289
+IH + +K G + FV S MY K D + +LF+ + R++ +W I++ V G
Sbjct: 129 QIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDG 188
Query: 290 EEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
A +AF+ + D PN TF A ++A ++ + G QLH VLR G +SV N
Sbjct: 189 RPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCN 248
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
++ Y KC Q+ S+ I+F M ++ +SW +++ Y Q +E+A R++
Sbjct: 249 GLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
++F +SVLS C MA LE G+ IHAH + +ERT + SAL++MY KCG I+++ Q F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPM--VGLRPDSVTFMGVLTACSHAGL 527
E ++V+ ++I GYA G A+ LFE++ G P+ +TF+ +L+ACS AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 528 VDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
V+ G F+ M YG P EHY C++D+L RAG + A I+ MP Q VW L
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 588 RACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIK 647
AC + G G AE + +L P +G H+ L+N +AA GRW EA VR+ ++ G+ K
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 648 EPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRML 680
G+S I VK+QV AF + DR H ++I L
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTL 581
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 146/500 (29%), Positives = 251/500 (50%), Gaps = 26/500 (5%)
Query: 3 LQSTRHRVGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVN--SQLKHLVKSGYLHDA 60
+ ++ R+GR+ + + + P P +++ +N S+L H A
Sbjct: 17 ISASSMRLGRVVHARIVKTLDSPP---------PPFLANYLINMYSKLDHP------ESA 61
Query: 61 RKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACA- 119
R + R+ +SWT+LISG + AL F + E + D F A KA A
Sbjct: 62 RLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPND-FTFPCAFKAVAS 120
Query: 120 LNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTA 179
L + V G+ +H VK G + VFVG + DMY K + ++FDE+P RN+ +W A
Sbjct: 121 LRLPVT-GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 180 IITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRG 239
I+ V G +E + F E R +S TF L A +D LN G ++H ++L+ G
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG 239
Query: 240 FDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFV 299
FD V N L Y KC ++ S +F M T++ +SW +++ +YVQ E+E A ++
Sbjct: 240 FDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYL 299
Query: 300 RMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCG 359
R ++ V+ +++ ++++SA A +A ++ G +HAH ++ + ++ V ++++ MY KCG
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 360 QLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEA---FEYLALMRREGPRPNEFAFAS 416
+ + F M +++++ +++IGGY+ G + A FE +A R GP PN F S
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA-PRGCGPTPNYMTFVS 418
Query: 417 VLSVCGNMAILEQGKQIHAHVMSI-GLERTAMIKSALINMYSKCGSIKEASQIFYETESD 475
+LS C +E G +I + S G+E A S +++M + G ++ A + +
Sbjct: 419 LLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQ 478
Query: 476 DIVS-WTAMINGYAEHGYSQ 494
+S W A+ N HG Q
Sbjct: 479 PTISVWGALQNACRMHGKPQ 498
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 364 bits (934), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 188/585 (32%), Positives = 304/585 (51%), Gaps = 35/585 (5%)
Query: 131 HGYTVKTGFVNSVFVGSALLDM--YTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAG 188
HG+ ++TG + + S L M + +E +VFDE+P N +W +I
Sbjct: 50 HGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGP 109
Query: 189 HNKEGLIYFAEMW-RSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
+ F +M S+ + YTF ++KA+A+ +L+ G+ +H + +K FVA
Sbjct: 110 DPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVA 169
Query: 248 NSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVK 307
NSL Y CG LD + ++F + +DV+SW ++I +VQ G + A + F +M+ DVK
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVK 229
Query: 308 PNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIV 367
+ T ++SA A + +++G Q+ +++ + +L++AN+++ MY+KCG + +
Sbjct: 230 ASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRL 289
Query: 368 F-------------------------------HGMIRRDIISWSTIIGGYSQGGYEEEAF 396
F + M ++DI++W+ +I Y Q G EA
Sbjct: 290 FDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEAL 349
Query: 397 -EYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINM 455
+ L ++ + N+ S LS C + LE G+ IH+++ G+ + SALI+M
Sbjct: 350 IVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHM 409
Query: 456 YSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTF 515
YSKCG ++++ ++F E D+ W+AMI G A HG EA+ +F K+ ++P+ VTF
Sbjct: 410 YSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 516 MGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMP 575
V ACSH GLVD F+ M YG VP ++HY C++D+L R+G L A IE MP
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMP 529
Query: 576 HQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAE 635
VW LL AC + ++N ++LEL P G H+ L+NIYA G+W +E
Sbjct: 530 IPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSE 589
Query: 636 VRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRML 680
+RK MR G+ KEPG S I++ + F+S D H E +Y L
Sbjct: 590 LRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKL 634
Score = 204 bits (520), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/509 (26%), Positives = 236/509 (46%), Gaps = 76/509 (14%)
Query: 57 LHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALK 116
L ARK+FD + + + +W TLI Y D + ++ F + E Q + + +K
Sbjct: 80 LEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIK 139
Query: 117 ACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVS 176
A A +++ G+SLHG VK+ + VFV ++L+ Y G ++ C+VF + ++VVS
Sbjct: 140 AAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVS 199
Query: 177 WTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIML 236
W ++I G V+ G + L F +M + T VL A A L FGR++ + +
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 237 KRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTT---------------- 280
+ +V +AN++ MY+KCG ++ + RLF+ M +D ++WTT
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 281 ---------------IITSYVQMGEEENAFDAFVRMQ-ESDVKPNEYTFAAIISASANLA 324
+I++Y Q G+ A F +Q + ++K N+ T + +SA A +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 325 RIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIG 384
++ G +H+++ + G+ + V ++++ MYSKCG L + VF+ + +RD+ WS +IG
Sbjct: 380 ALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIG 439
Query: 385 GYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLER 444
G + G EA + M+ +PN F +V C
Sbjct: 440 GLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCAC----------------------- 476
Query: 445 TAMIKSALINMYSKCGSIKEASQIFYETESD-DIVS----WTAMINGYAEHGYSQEAIHL 499
S G + EA +F++ ES+ IV + +++ GY ++A+
Sbjct: 477 ------------SHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 500 FEKVPMVGLRPDSVTFMGVLTACS-HAGL 527
E +P + P + + +L AC HA L
Sbjct: 525 IEAMP---IPPSTSVWGALLGACKIHANL 550
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 218/460 (47%), Gaps = 45/460 (9%)
Query: 229 REIHTIMLKRGFDVVSFVANSLATM--YSKCGKLDYSLRLFERMSTRDVISWTTIITSYV 286
++ H M++ G + A+ L M S L+Y+ ++F+ + + +W T+I +Y
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYA 106
Query: 287 QMGEEENAFDAFVRM-QESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSL 345
+ + AF+ M ES PN+YTF +I A+A ++ + G+ LH ++ + +
Sbjct: 107 SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDV 166
Query: 346 SVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRRE 405
VANS++ Y CG L S VF + +D++SW+++I G+ Q G ++A E M E
Sbjct: 167 FVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 406 GPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEA 465
+ + VLS C + LE G+Q+ +++ + + +A+++MY+KCGSI++A
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 466 SQIFYETESDDIVSWTAMINGYA-------------------------------EHGYSQ 494
++F E D V+WT M++GYA ++G
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 495 EAIHLFEKVPM-VGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGC 553
EA+ +F ++ + ++ + +T + L+AC+ G ++LG + + K+G +
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRMNFHVTSA 405
Query: 554 MIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSC 613
+I + + G L + + N ++D VWS ++ + G CG + ++ +
Sbjct: 406 LIHMYSKCGDLEKSREVF-NSVEKRDVFVWSAMIGGLAMHG---CGNEAVDMFYKMQEAN 461
Query: 614 AGTH-ITLANIYAA---KGRWREAAEVRKMMRSK-GVIKE 648
+ +T N++ A G EA + M S G++ E
Sbjct: 462 VKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPE 501
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 165/375 (44%), Gaps = 35/375 (9%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
NS + G L A K+F T+ ++D +SW ++I+G+V+ +AL LF ++ E +
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESE-DV 228
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
+ L ACA N+ +G + Y + ++ + +A+LDMYTK G IE R
Sbjct: 229 KASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKR 288
Query: 165 VFD-------------------------------EMPLRNVVSWTAIITGLVRAGHNKEG 193
+FD MP +++V+W A+I+ + G E
Sbjct: 289 LFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEA 348
Query: 194 LIYFAEMWRSKEQG-DSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLAT 252
LI F E+ K + T L A A GAL GR IH+ + K G + V ++L
Sbjct: 349 LIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIH 408
Query: 253 MYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYT 312
MYSKCG L+ S +F + RDV W+ +I G A D F +MQE++VKPN T
Sbjct: 409 MYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVT 468
Query: 313 FAAIISASANLARIQWGEQL-HAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGM 371
F + A ++ + E L H G+V I+ + + G L M
Sbjct: 469 FTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Query: 372 -IRRDIISWSTIIGG 385
I W ++G
Sbjct: 529 PIPPSTSVWGALLGA 543
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 107/245 (43%), Gaps = 40/245 (16%)
Query: 20 ACTERRPLLLFQGTQLPVYVSTPEVN-------SQLKHLVKSGYLHDARKMFDTMTQRDE 72
AC + R L G Q+ Y+ VN + L K G + DA+++FD M ++D
Sbjct: 241 ACAKIRNLEF--GRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDN 298
Query: 73 ISWTTLISGYVKAMD-------------------------------SIEALALFSRVWVE 101
++WTT++ GY + D EAL +F + ++
Sbjct: 299 VTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQ 358
Query: 102 PQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIEL 161
M ++ L L ACA + G +H Y K G + V SAL+ MY+K G +E
Sbjct: 359 KNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEK 418
Query: 162 GCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASAD 221
VF+ + R+V W+A+I GL G E + F +M + + + TF V A +
Sbjct: 419 SREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSH 478
Query: 222 SGALN 226
+G ++
Sbjct: 479 TGLVD 483
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 362 bits (929), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 195/561 (34%), Positives = 298/561 (53%), Gaps = 36/561 (6%)
Query: 145 VGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSK 204
+G L+ Y L + +VFDE+P RNV+ +I V G EG+ F M
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 205 EQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSL 264
+ D YTF VLKA + SG + GR+IH K G FV N L +MY KCG L +
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 265 RLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLA 324
+ + MS RDV+SW +++ Y Q ++A + M+ + + T A+++ A +N
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN-- 253
Query: 325 RIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIG 384
+ MY K +F M ++ ++SW+ +IG
Sbjct: 254 -----------------------TTTENVMYVK--------DMFFKMGKKSLVSWNVMIG 282
Query: 385 GYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLER 444
Y + EA E + M +G P+ + SVL CG+ + L GK+IH ++ L
Sbjct: 283 VYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 342
Query: 445 TAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVP 504
++++ALI+MY+KCG +++A +F +S D+VSWTAMI+ Y G +A+ LF K+
Sbjct: 343 NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ 402
Query: 505 MVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRL 564
GL PDS+ F+ L ACSHAGL++ G F LM+D Y P EH CM+DLL RAG++
Sbjct: 403 DSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKV 462
Query: 565 SDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIY 624
+A I++M + ++ VW LL AC V D + G A+K+ +L P +G ++ L+NIY
Sbjct: 463 KEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIY 522
Query: 625 AAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLA 684
A GRW E +R +M+SKG+ K PG S ++V + F+ DR H Q ++IYR LD+L
Sbjct: 523 AKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLV 582
Query: 685 SRESD---IDDLDSLVHDAED 702
+ + + D +S +HD E+
Sbjct: 583 KKMKELGYVPDSESALHDVEE 603
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 215/468 (45%), Gaps = 48/468 (10%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVW---VEPQMNMDPFILSLALK 116
ARK+FD + +R+ I +I YV E + +F + V P D + LK
Sbjct: 93 ARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRP----DHYTFPCVLK 148
Query: 117 ACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVS 176
AC+ + + G +HG K G +++FVG+ L+ MY K G + V DEM R+VVS
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS 208
Query: 177 WTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIML 236
W +++ G + + L EM K D+ T A +L A +++ N
Sbjct: 209 WNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTEN---------- 258
Query: 237 KRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFD 296
MY K +F +M + ++SW +I Y++ A +
Sbjct: 259 ---------------VMYVK--------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVE 295
Query: 297 AFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYS 356
+ RM+ +P+ + +++ A + + + G+++H ++ R L+ +L + N+++ MY+
Sbjct: 296 LYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYA 355
Query: 357 KCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFAS 416
KCG L VF M RD++SW+ +I Y G +A + ++ G P+ AF +
Sbjct: 356 KCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVT 415
Query: 417 VLSVCGNMAILEQGKQIHAHVMSIGLERTAMIK--SALINMYSKCGSIKEASQIFYE--T 472
L+ C + +LE+G+ +M+ + T ++ + ++++ + G +KEA + +
Sbjct: 416 TLAACSHAGLLEEGRSCF-KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 473 ESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLT 520
E ++ V W A++ H S I L + L P+ + +L+
Sbjct: 475 EPNERV-WGALLGACRVH--SDTDIGLLAADKLFQLAPEQSGYYVLLS 519
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 183/416 (43%), Gaps = 68/416 (16%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
K G+L +AR + D M++RD +SW +L+ GY + +AL + R +++ D ++
Sbjct: 187 KCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEV-CREMESVKISHDAGTMA 245
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
L A + T N ++V DM+ K+GK +
Sbjct: 246 SLLPAVS----------------NTTTENVMYVK----DMFFKMGK-------------K 272
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
++VSW +I ++ E + ++ M + D+ + VL A D+ AL+ G++IH
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIH 332
Query: 233 TIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEE 292
+ ++ + N+L MY+KCG L+ + +FE M +RDV+SWT +I++Y G
Sbjct: 333 GYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGC 392
Query: 293 NAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIM 352
+A F ++Q+S + P+ F ++A + HA +L G
Sbjct: 393 DAVALFSKLQDSGLVPDSIAFVTTLAACS-----------HAGLLEEG------------ 429
Query: 353 AMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEF 412
C +L + H I + + ++ + G +EA+ ++ M E PNE
Sbjct: 430 ---RSCFKLMTD----HYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSME---PNER 479
Query: 413 AFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
+ ++L C + + G + + E++ L N+Y+K G +E + I
Sbjct: 480 VWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYY-VLLSNIYAKAGRWEEVTNI 534
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 9/320 (2%)
Query: 332 LHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGY 391
+H+ ++ L + S+ +M Y+ + S VF + R++I + +I Y G+
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 392 EEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSA 451
E + M RP+ + F VL C + G++IH +GL T + +
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 452 LINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPD 511
L++MY KCG + EA + E D+VSW +++ GYA++ +A+ + ++ V + D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 512 SVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMI 571
+ T +L A S+ ++ Y M K G S + MI + + +A +
Sbjct: 241 AGTMASLLPAVSNTTTENV--MYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 572 ENMP---HQKDDVVWSTLLRACMVQGDVNCGR--HTAEKILELHPSCAGTHITLANIYAA 626
M + D V +++L AC ++ G+ H + +L P+ + L ++YA
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN-ALIDMYAK 356
Query: 627 KGRWREAAEVRKMMRSKGVI 646
G +A +V + M+S+ V+
Sbjct: 357 CGCLEKARDVFENMKSRDVV 376
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N+ + K G L AR +F+ M RD +SWT +IS Y + +A+ALFS++ + +
Sbjct: 348 NALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQ-DSGL 406
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSA-LLDMYTKLGKIELGC 163
D L AC+ + G S + A ++D+ + GK++
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 164 RVFDEMPLR-NVVSWTAIITGLVRAGHNKE-GLIYFAEMWRSKEQGDSYTFAIVLKASAD 221
R +M + N W A++ G R + + GL+ ++++ + Y + ++ A
Sbjct: 467 RFIQDMSMEPNERVWGALL-GACRVHSDTDIGLLAADKLFQLAPEQSGY-YVLLSNIYAK 524
Query: 222 SGALNFGREIHTIMLKRGF 240
+G I IM +G
Sbjct: 525 AGRWEEVTNIRNIMKSKGL 543
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 361 bits (927), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/472 (37%), Positives = 281/472 (59%), Gaps = 1/472 (0%)
Query: 207 GDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRL 266
D + +LK L GR +H +L+ F + N+L MY+KCG L+ + ++
Sbjct: 58 ADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKV 117
Query: 267 FERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARI 326
FE+M RD ++WTT+I+ Y Q +A F +M PNE+T +++I A+A R
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 327 QWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGY 386
G QLH ++ G ++ V ++++ +Y++ G + +VF + R+ +SW+ +I G+
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 387 SQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTA 446
++ E+A E M R+G RP+ F++AS+ C + LEQGK +HA+++ G + A
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 447 MIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMV 506
+ L++MY+K GSI +A +IF D+VSW +++ YA+HG+ +EA+ FE++ V
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 507 GLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSD 566
G+RP+ ++F+ VLTACSH+GL+D G+HY+ LM K G VP HY ++DLL RAG L+
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMK-KDGIVPEAWHYVTVVDLLGRAGDLNR 416
Query: 567 AENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAA 626
A IE MP + +W LL AC + + G + AE + EL P G H+ L NIYA+
Sbjct: 417 ALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYAS 476
Query: 627 KGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYR 678
GRW +AA VRK M+ GV KEP S +++++ + FV++D RH Q E+I R
Sbjct: 477 GGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Score = 199 bits (506), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 212/395 (53%), Gaps = 5/395 (1%)
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
LK C + + G +H + +++ F + + +G+ LL+MY K G +E +VF++MP R+
Sbjct: 67 LKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDF 126
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
V+WT +I+G + + L++F +M R + +T + V+KA+A G ++H
Sbjct: 127 VTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGF 186
Query: 235 MLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENA 294
+K GFD V ++L +Y++ G +D + +F+ + +R+ +SW +I + + E A
Sbjct: 187 CVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKA 246
Query: 295 FDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAM 354
+ F M +P+ +++A++ A ++ ++ G+ +HA++++ G N+++ M
Sbjct: 247 LELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDM 306
Query: 355 YSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAF 414
Y+K G + +F + +RD++SW++++ Y+Q G+ +EA + MRR G RPNE +F
Sbjct: 307 YAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISF 366
Query: 415 ASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETES 474
SVL+ C + +L++G + + G+ A ++++ + G + A + E
Sbjct: 367 LSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPI 426
Query: 475 DDIVS-WTAMINGYAEHGYSQ----EAIHLFEKVP 504
+ + W A++N H ++ A H+FE P
Sbjct: 427 EPTAAIWKALLNACRMHKNTELGAYAAEHVFELDP 461
Score = 191 bits (486), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/318 (33%), Positives = 179/318 (56%), Gaps = 1/318 (0%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N+ L K G L +ARK+F+ M QRD ++WTTLISGY + +AL F+++ +
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQM-LRFGY 157
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
+ + F LS +KA A G LHG+ VK GF ++V VGSALLD+YT+ G ++
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
VFD + RN VSW A+I G R ++ L F M R + +++A + A + +G
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 225 LNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITS 284
L G+ +H M+K G +V+F N+L MY+K G + + ++F+R++ RDV+SW +++T+
Sbjct: 278 LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTA 337
Query: 285 YVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDS 344
Y Q G + A F M+ ++PNE +F ++++A ++ + G + + + G+V
Sbjct: 338 YAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPE 397
Query: 345 LSVANSIMAMYSKCGQLT 362
+++ + + G L
Sbjct: 398 AWHYVTVVDLLGRAGDLN 415
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 190/642 (29%), Positives = 351/642 (54%), Gaps = 6/642 (0%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVK--AMDSIEALALFSRVWVEP 102
+S +K ++ G + K+FD + Q+D + W +++GY K A+DS+ + FS + ++
Sbjct: 177 SSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSV--IKGFSVMRMD- 233
Query: 103 QMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELG 162
Q++ + L CA + ++ G LHG V +G + ++LL MY+K G+ +
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 163 CRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADS 222
++F M + V+W +I+G V++G +E L +F EM S D+ TF+ +L + +
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 223 GALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTII 282
L + ++IH +++ + F+ ++L Y KC + + +F + ++ DV+ +T +I
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 283 TSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLV 342
+ Y+ G ++ + F + + + PNE T +I+ L ++ G +LH +++ G
Sbjct: 414 SGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFD 473
Query: 343 DSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALM 402
+ ++ +++ MY+KCG++ +F + +RDI+SW+++I +Q A + M
Sbjct: 474 NRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM 533
Query: 403 RREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
G + + ++ LS C N+ GK IH ++ L +S LI+MY+KCG++
Sbjct: 534 GVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNL 593
Query: 463 KEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLF-EKVPMVGLRPDSVTFMGVLTA 521
K A +F + +IVSW ++I HG ++++ LF E V G+RPD +TF+ ++++
Sbjct: 594 KAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 522 CSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDV 581
C H G VD G +F M++ YG P +EHY C++DL RAGRL++A +++MP D
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAG 713
Query: 582 VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMR 641
VW TLL AC + +V + K+++L PS +G ++ ++N +A W +VR +M+
Sbjct: 714 VWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWESVTKVRSLMK 773
Query: 642 SKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLL 683
+ V K PG+S I++ + FVS D H + IY +L+ L
Sbjct: 774 EREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSL 815
Score = 236 bits (603), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 158/595 (26%), Positives = 287/595 (48%), Gaps = 32/595 (5%)
Query: 20 ACTERRPLLLFQGTQLPVYVSTPEVNSQ-------LKHLVKSGYLHDARKMFDTMT-QRD 71
AC+ P LL QG Q+ ++ ++ L G D KMF + +R
Sbjct: 44 ACSN--PNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 72 EI-SWTTLISGYVKAMDSIEALALFSRVW---VEPQMNMDPFILSLALKACALNVNVNYG 127
I W ++IS +V+ +ALA + ++ V P ++ P ++ KAC N
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLV----KACVALKNFKGI 157
Query: 128 ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRA 187
+ L G + FV S+L+ Y + GKI++ ++FD + ++ V W ++ G +
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKC 217
Query: 188 GHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
G + F+ M + ++ TF VL A ++ G ++H +++ G D +
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 248 NSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVK 307
NSL +MYSKCG+ D + +LF MS D ++W +I+ YVQ G E + F M S V
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVL 337
Query: 308 PNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIV 367
P+ TF++++ + + +++ +Q+H +++R + + + ++++ Y KC ++ +
Sbjct: 338 PDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNI 397
Query: 368 FHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAIL 427
F D++ ++ +I GY G ++ E + + PNE S+L V G + L
Sbjct: 398 FSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLAL 457
Query: 428 EQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGY 487
+ G+++H ++ G + I A+I+MY+KCG + A +IF DIVSW +MI
Sbjct: 458 KLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRC 517
Query: 488 AEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHYF----NLMSDK 541
A+ AI +F ++ + G+ D V+ L+AC++ G H F +L SD
Sbjct: 518 AQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDV 577
Query: 542 YGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDV 596
Y +ID+ + G L A N+ + M +K+ V W++++ AC G +
Sbjct: 578 YS-------ESTLIDMYAKCGNLKAAMNVFKTM-KEKNIVSWNSIIAACGNHGKL 624
Score = 224 bits (570), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 141/488 (28%), Positives = 239/488 (48%), Gaps = 10/488 (2%)
Query: 108 PFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFD 167
P LSL L+AC+ + G+ +H + + + +L MY G ++F
Sbjct: 35 PRRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFY 94
Query: 168 EMPLR--NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGAL 225
+ LR ++ W +II+ VR G + L ++ +M D TF ++KA
Sbjct: 95 RLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF 154
Query: 226 NFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSY 285
+ + G D FVA+SL Y + GK+D +LF+R+ +D + W ++ Y
Sbjct: 155 KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGY 214
Query: 286 VQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSL 345
+ G ++ F M+ + PN TF ++S A+ I G QLH V+ G+
Sbjct: 215 AKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEG 274
Query: 346 SVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRRE 405
S+ NS+++MYSKCG+ S +F M R D ++W+ +I GY Q G EE+ + M
Sbjct: 275 SIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS 334
Query: 406 GPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEA 465
G P+ F+S+L LE KQIH ++M + + SALI+ Y KC + A
Sbjct: 335 GVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMA 394
Query: 466 SQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHA 525
IF + S D+V +TAMI+GY +G +++ +F + V + P+ +T + +L
Sbjct: 395 QNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGIL 454
Query: 526 GLVDLG--FHYFNLMSDKYGFVPSKEHYGC-MIDLLCRAGRLSDAENMIENMPHQKDDVV 582
+ LG H F + K GF ++ + GC +ID+ + GR++ A + E + ++D V
Sbjct: 455 LALKLGRELHGFII---KKGF-DNRCNIGCAVIDMYAKCGRMNLAYEIFERL-SKRDIVS 509
Query: 583 WSTLLRAC 590
W++++ C
Sbjct: 510 WNSMITRC 517
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 17/189 (8%)
Query: 417 VLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFY--ETES 474
+L C N +L QGKQ+HA ++ + + ++ MY+ CGS + ++FY +
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 475 DDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTAC----SHAGLVDL 530
I W ++I+ + +G +A+ + K+ G+ PD TF ++ AC + G+ L
Sbjct: 101 SSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFL 160
Query: 531 GFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRAC 590
+L D FV S +I G++ D + + + QKD V+W+
Sbjct: 161 SDTVSSLGMDCNEFVASS-----LIKAYLEYGKI-DVPSKLFDRVLQKDCVIWNV----- 209
Query: 591 MVQGDVNCG 599
M+ G CG
Sbjct: 210 MLNGYAKCG 218
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 361 bits (926), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 196/612 (32%), Positives = 328/612 (53%), Gaps = 39/612 (6%)
Query: 130 LHGYTVKTGFVNSVFVGSALLD---MYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVR 186
+H +K G N+ + S L++ + + VF + N++ W + G
Sbjct: 52 IHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHAL 111
Query: 187 AGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFV 246
+ L + M +SYTF VLK+ A S A G++IH +LK G D+ +V
Sbjct: 112 SSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYV 171
Query: 247 ANSLATMYSKCGKLD-----------------------YSLR--------LFERMSTRDV 275
SL +MY + G+L+ Y+ R LF+ + +DV
Sbjct: 172 HTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV 231
Query: 276 ISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAH 335
+SW +I+ Y + G + A + F M +++V+P+E T ++SA A I+ G Q+H
Sbjct: 232 VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW 291
Query: 336 VLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEA 395
+ G +L + N+++ +YSKCG+L + +F + +D+ISW+T+IGGY+ +EA
Sbjct: 292 IDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEA 351
Query: 396 FEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMS--IGLERTAMIKSALI 453
M R G PN+ S+L C ++ ++ G+ IH ++ G+ + ++++LI
Sbjct: 352 LLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLI 411
Query: 454 NMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSV 513
+MY+KCG I+ A Q+F + SW AMI G+A HG + + LF ++ +G++PD +
Sbjct: 412 DMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDI 471
Query: 514 TFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIEN 573
TF+G+L+ACSH+G++DLG H F M+ Y P EHYGCMIDLL +G +AE MI
Sbjct: 472 TFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINM 531
Query: 574 MPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREA 633
M + D V+W +LL+AC + G+V G AE ++++ P G+++ L+NIYA+ GRW E
Sbjct: 532 MEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEV 591
Query: 634 AEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRML---DLLASRESDI 690
A+ R ++ KG+ K PG S I++ V F+ D+ H + +IY ML ++L + +
Sbjct: 592 AKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFV 651
Query: 691 DDLDSLVHDAED 702
D ++ + E+
Sbjct: 652 PDTSEVLQEMEE 663
Score = 214 bits (544), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 213/410 (51%), Gaps = 40/410 (9%)
Query: 60 ARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFS---RVWVEPQMNMDPFILSLALK 116
A +F T+ + + + W T+ G+ + D + AL L+ + + P PF+L K
Sbjct: 87 AISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVL----K 142
Query: 117 ACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVV- 175
+CA + G+ +HG+ +K G ++V ++L+ MY + G++E +VFD+ P R+VV
Sbjct: 143 SCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVS 202
Query: 176 ------------------------------SWTAIITGLVRAGHNKEGLIYFAEMWRSKE 205
SW A+I+G G+ KE L F +M ++
Sbjct: 203 YTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 206 QGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLR 265
+ D T V+ A A SG++ GR++H + GF + N+L +YSKCG+L+ +
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 266 LFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLAR 325
LFER+ +DVISW T+I Y M + A F M S PN+ T +I+ A A+L
Sbjct: 323 LFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGA 382
Query: 326 IQWGEQLHAHV-LRL-GLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTII 383
I G +H ++ RL G+ ++ S+ S++ MY+KCG + + VF+ ++ + + SW+ +I
Sbjct: 383 IDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMI 442
Query: 384 GGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQI 433
G++ G + +F+ + MR+ G +P++ F +LS C + +L+ G+ I
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 195/443 (44%), Gaps = 71/443 (16%)
Query: 229 REIHTIMLKRGFDVVSFVANSL---ATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSY 285
R IH M+K G ++ + L + L Y++ +F+ + +++ W T+ +
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGH 109
Query: 286 VQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSL 345
+ +A +V M + PN YTF ++ + A + G+Q+H HVL+LG L
Sbjct: 110 ALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDL 169
Query: 346 SVANSIMAMYSKCGQLTSTSIVF--------------------HGMIR-----------R 374
V S+++MY + G+L VF G I +
Sbjct: 170 YVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVK 229
Query: 375 DIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIH 434
D++SW+ +I GY++ G +EA E M + RP+E +V+S C +E G+Q+H
Sbjct: 230 DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVH 289
Query: 435 AHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQ 494
+ G I +ALI++YSKCG ++ A +F D++SW +I GY +
Sbjct: 290 LWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYK 349
Query: 495 EAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDK--YGFVPSKEHYG 552
EA+ LF+++ G P+ VT + +L AC+H G +D+G + ++ DK G +
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG-RWIHVYIDKRLKGVTNASSLRT 408
Query: 553 CMIDLLCRAGRLSDAENMIENMPH----------------------------------QK 578
+ID+ + G + A + ++ H Q
Sbjct: 409 SLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQP 468
Query: 579 DDVVWSTLLRACMVQGDVNCGRH 601
DD+ + LL AC G ++ GRH
Sbjct: 469 DDITFVGLLSACSHSGMLDLGRH 491
Score = 171 bits (432), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 159/287 (55%), Gaps = 3/287 (1%)
Query: 48 LKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMD 107
+K GY+ +A+K+FD + +D +SW +ISGY + + EAL LF + ++ + D
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPD 265
Query: 108 PFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFD 167
+ + ACA + ++ G +H + GF +++ + +AL+D+Y+K G++E C +F+
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFE 325
Query: 168 EMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNF 227
+P ++V+SW +I G KE L+ F EM RS E + T +L A A GA++
Sbjct: 326 RLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDI 385
Query: 228 GREIHTIMLKR--GFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSY 285
GR IH + KR G S + SL MY+KCG ++ + ++F + + + SW +I +
Sbjct: 386 GRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGF 445
Query: 286 VQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQL 332
G + +FD F RM++ ++P++ TF ++SA ++ + G +
Sbjct: 446 AMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Score = 124 bits (312), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 144/300 (48%), Gaps = 36/300 (12%)
Query: 322 NLARIQWGEQLHAHVLRLGLVDS---LSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIIS 378
N +Q +HA ++++GL ++ LS + L VF + +++
Sbjct: 42 NCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLI 101
Query: 379 WSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVM 438
W+T+ G++ A + M G PN + F VL C ++G+QIH HV+
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 439 SIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIH 498
+G + + ++LI+MY + G +++A ++F ++ D+VS+TA+I GYA GY + A
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 499 LFEKVPM-------------------------------VGLRPDSVTFMGVLTACSHAGL 527
LF+++P+ +RPD T + V++AC+ +G
Sbjct: 222 LFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGS 281
Query: 528 VDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
++LG +L D +GF + + +IDL + G L A + E +P+ KD + W+TL+
Sbjct: 282 IELG-RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY-KDVISWNTLI 339
>sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containing protein At1g77010,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E5 PE=3
SV=1
Length = 695
Score = 358 bits (920), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 215/670 (32%), Positives = 342/670 (51%), Gaps = 106/670 (15%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
N L+ +SG + AR +FD M R+ SW T+I GY+ + + +L F + P+
Sbjct: 66 NHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM---PER 122
Query: 105 NMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCR 164
+ GY+ N V G + K G++ + R
Sbjct: 123 D--------------------------GYSW-----NVVVSG------FAKAGELSVARR 145
Query: 165 VFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA 224
+F+ MP ++VV+ +++ G + G+ +E L F E+ S D+ T VLKA A+ A
Sbjct: 146 LFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFS---ADAITLTTVLKACAELEA 202
Query: 225 LNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKL--------------DYSLR----- 265
L G++IH +L G + S + +SL +Y+KCG L D+SL
Sbjct: 203 LKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISG 262
Query: 266 ------------LFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTF 313
LF+R S R VI W ++I+ Y+ + A F M+ ++ + + T
Sbjct: 263 YANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRTL 321
Query: 314 AAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTST--------- 364
AA+I+A L ++ G+Q+H H + GL+D + VA++++ MYSKCG
Sbjct: 322 AAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVES 381
Query: 365 --SIVFHGMIR--------------------RDIISWSTIIGGYSQGGYEEEAFEYLALM 402
+I+ + MI+ + +ISW+++ G+SQ G E EY M
Sbjct: 382 YDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQM 441
Query: 403 RREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
+ +E + +SV+S C +++ LE G+Q+ A +GL+ ++ S+LI++Y KCG +
Sbjct: 442 HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFV 501
Query: 463 KEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTAC 522
+ ++F D V W +MI+GYA +G EAI LF+K+ + G+RP +TFM VLTAC
Sbjct: 502 EHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTAC 561
Query: 523 SHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVV 582
++ GLV+ G F M +GFVP KEH+ CM+DLL RAG + +A N++E MP D +
Sbjct: 562 NYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSM 621
Query: 583 WSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRS 642
WS++LR C+ G G+ AEKI+EL P + ++ L+ I+A G W +A VRK+MR
Sbjct: 622 WSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSALVRKLMRE 681
Query: 643 KGVIKEPGWS 652
V K PG S
Sbjct: 682 NNVTKNPGSS 691
Score = 192 bits (488), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 144/553 (26%), Positives = 254/553 (45%), Gaps = 80/553 (14%)
Query: 31 QGTQLPVYVSTPEV-----NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKA 85
+GT L + PE N + K+G L AR++F+ M ++D ++ +L+ GY+
Sbjct: 109 KGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 86 MDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGF-----V 140
+ EAL LF E + D L+ LKACA + G+ +H + G +
Sbjct: 169 GYAEEALRLFK----ELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKM 224
Query: 141 NSVFVG--------------------------SALLDMYTKLGKIELGCRVFDEMPLRNV 174
NS V SAL+ Y G++ +FD R V
Sbjct: 225 NSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCV 284
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTI 234
+ W ++I+G + E L+ F EM R++ + DS T A V+ A G L G+++H
Sbjct: 285 ILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGKQMHCH 343
Query: 235 MLKRGF--DVVSFVANSLATMYSK-------------------------------CGKLD 261
K G D+V VA++L MYSK CG++D
Sbjct: 344 ACKFGLIDDIV--VASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRID 401
Query: 262 YSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASA 321
+ R+FER+ + +ISW ++ + Q G + F +M + D+ +E + +++ISA A
Sbjct: 402 DAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACA 461
Query: 322 NLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWST 381
+++ ++ GEQ+ A +GL V++S++ +Y KCG + VF M++ D + W++
Sbjct: 462 SISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNS 521
Query: 382 IIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHV-MSI 440
+I GY+ G EA + M G RP + F VL+ C ++E+G+++ + +
Sbjct: 522 MISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDH 581
Query: 441 GLERTAMIKSALINMYSKCGSIKEASQIFYETESD-DIVSWTAMINGYAEHGYSQEAIHL 499
G S ++++ ++ G ++EA + E D D W++++ G +GY
Sbjct: 582 GFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKA 641
Query: 500 FEKVPMVGLRPDS 512
EK+ + L P++
Sbjct: 642 AEKI--IELEPEN 652
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 232/543 (42%), Gaps = 108/543 (19%)
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNS-VFVGSALLDMYTKLGKIELGCRVFDEMPLRN 173
L++C+ +G +K GF++S V V + LL MY++ GK+ + +FDEMP RN
Sbjct: 33 LQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRN 92
Query: 174 VVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
SW +I G + +G L +F M + D Y++ +V+ A +G L+ R
Sbjct: 93 YFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVAR---- 144
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
RLF M +DV++ +++ Y+ G E
Sbjct: 145 -------------------------------RLFNAMPEKDVVTLNSLLHGYILNGYAEE 173
Query: 294 AFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMA 353
A F +E + + T ++ A A L ++ G+Q+HA +L G+ + +S++
Sbjct: 174 ALRLF---KELNFSADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVN 230
Query: 354 MYSKCGQLTSTSI-------------------------------VFHGMIRRDIISWSTI 382
+Y+KCG L S +F R +I W+++
Sbjct: 231 VYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSM 290
Query: 383 IGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGL 442
I GY + EA MR E R + A+V++ C + LE GKQ+H H GL
Sbjct: 291 ISGYIANNMKMEALVLFNEMRNE-TREDSRTLAAVINACIGLGFLETGKQMHCHACKFGL 349
Query: 443 ERTAMIKSALINMYSKCGSIKEASQIFYETESDD-------------------------- 476
++ S L++MYSKCGS EA ++F E ES D
Sbjct: 350 IDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFER 409
Query: 477 -----IVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
++SW +M NG++++G + E + F ++ + L D V+ V++AC+ ++LG
Sbjct: 410 IENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELG 469
Query: 532 FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACM 591
F + G + +IDL C+ G + + + M + D+V W++++
Sbjct: 470 EQVF-ARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV-KSDEVPWNSMISGYA 527
Query: 592 VQG 594
G
Sbjct: 528 TNG 530
>sp|Q9SCT2|PP277_ARATH Pentatricopeptide repeat-containing protein At3g50420
OS=Arabidopsis thaliana GN=PCMP-E85 PE=2 SV=1
Length = 794
Score = 358 bits (918), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 210/647 (32%), Positives = 353/647 (54%), Gaps = 17/647 (2%)
Query: 41 TPEVNSQLKHL-VKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMD-SIEALALFSRV 98
+P N+ L + V+ G L ARK+FD M R+ +S+ L S Y + D + A L + +
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 99 ---WVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTK 155
+V+P N F + ++ CA+ +V G SL+ +K G+ ++V V +++L MY+
Sbjct: 191 AFEYVKP--NSSTF--TSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSS 246
Query: 156 LGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIV 215
G +E R+FD + R+ V+W +I G ++ ++GL++F M S +T++IV
Sbjct: 247 CGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIV 306
Query: 216 LKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDV 275
L + G+ + G+ IH ++ + N+L MY CG + + +F R+ ++
Sbjct: 307 LNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNL 366
Query: 276 ISWTTIITSYVQMGEEENAFDAFVRM-QESDVKPNEYTFAAIISASANLARIQWGEQLHA 334
+SW +II+ + G E A + R+ + S +P+EYTF+A ISA+A R G+ LH
Sbjct: 367 VSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHG 426
Query: 335 HVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEE 394
V +LG S+ V ++++MY K + S VF M RD++ W+ +I G+S+ G E
Sbjct: 427 QVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSEL 486
Query: 395 AFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALIN 454
A ++ M RE R + F+ +SV+ C +MA+L QG+ H + G + + AL++
Sbjct: 487 AVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVD 546
Query: 455 MYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVT 514
MY K G + A IF + D+ W +M+ Y++HG ++A+ FE++ G PD+VT
Sbjct: 547 MYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVT 606
Query: 515 FMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENM 574
++ +L ACSH G G +N M ++ G +HY CM++L+ +AG + +A +IE
Sbjct: 607 YLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQS 665
Query: 575 PHQKDDV-VWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREA 633
P + +W TLL AC+ ++ G + AE+IL+L P THI L+N+YA GRW +
Sbjct: 666 PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDV 725
Query: 634 AEVRKMMRSKGVIKEPGWSRIKV-KDQVSAFVSSDRRH----SQGED 675
AE+R+ +R K+PG S I+V + F S D+ + SQ +D
Sbjct: 726 AEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQAQD 772
Score = 227 bits (578), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 160/618 (25%), Positives = 296/618 (47%), Gaps = 18/618 (2%)
Query: 42 PEVNSQLKHL-VKSGYLHDARKMFDTMTQRDEISWTTL--ISGYVKAMDSIEA----LAL 94
P N+ L + V+ L ARK+FD M QR+ ++ L + YV S+ + L
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 95 FSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGF---VNSVFVGSALLD 151
F ++ P + ++ L K ++ V + +H + G S + + L+
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCVSITV-LKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 152 MYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVR-AGHNKEGLIYFAEMWRSKEQGDSY 210
MY + G +E +VFD+MP RNVVS+ A+ + R M + +S
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 211 TFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERM 270
TF +++ A + G +++ ++K G+ V S+ MYS CG L+ + R+F+ +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 271 STRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGE 330
+ RD ++W T+I ++ + E+ F M S V P ++T++ +++ + L G+
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 331 QLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGG 390
+HA ++ + L + N+++ MY CG + VF + +++SW++II G S+ G
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 391 YEEEA-FEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIK 449
+ E+A Y L+R PRP+E+ F++ +S GK +H V +G ER+ +
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 450 SALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLR 509
+ L++MY K + A ++F + D+V WT MI G++ G S+ A+ F ++ R
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNR 500
Query: 510 PDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAEN 569
D + V+ ACS ++ G F+ ++ + GF G ++D+ + G+ AE
Sbjct: 501 SDGFSLSSVIGACSDMAMLRQG-EVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 570 MIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILE--LHPSCAGTHITLANIYAAK 627
I ++ D W+++L A G V E+ILE P A T+++L + +
Sbjct: 560 -IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD-AVTYLSLLAACSHR 617
Query: 628 GRWREAAEVRKMMRSKGV 645
G + + M+ +G+
Sbjct: 618 GSTLQGKFLWNQMKEQGI 635
>sp|Q9C507|PP111_ARATH Putative pentatricopeptide repeat-containing protein At1g69350,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-E66 PE=3
SV=1
Length = 787
Score = 357 bits (917), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 207/644 (32%), Positives = 349/644 (54%), Gaps = 5/644 (0%)
Query: 53 KSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILS 112
++G L DA K+FD M RD ++W+TL+S ++ + ++AL +F + V+ + D +
Sbjct: 148 QTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMF-KCMVDDGVEPDAVTMI 206
Query: 113 LALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLR 172
++ CA + S+HG + F + ++LL MY+K G + R+F+++ +
Sbjct: 207 SVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKK 266
Query: 173 NVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIH 232
N VSWTA+I+ R +++ L F+EM +S + + T VL + G + G+ +H
Sbjct: 267 NAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVH 326
Query: 233 TIMLKRGFDV-VSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEE 291
++R D ++ +L +Y++CGKL + +S R++++W ++I+ Y G
Sbjct: 327 GFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMV 386
Query: 292 ENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSI 351
A F +M +KP+ +T A+ ISA N + G+Q+H HV+R + D V NS+
Sbjct: 387 IQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEF-VQNSL 445
Query: 352 MAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNE 411
+ MYSK G + S S VF+ + R +++W++++ G+SQ G EA M NE
Sbjct: 446 IDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNE 505
Query: 412 FAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYE 471
F +V+ C ++ LE+GK +H ++ GL + +ALI+MY+KCG + A +F
Sbjct: 506 VTFLAVIQACSSIGSLEKGKWVHHKLIISGL-KDLFTDTALIDMYAKCGDLNAAETVFRA 564
Query: 472 TESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG 531
S IVSW++MIN Y HG AI F ++ G +P+ V FM VL+AC H+G V+ G
Sbjct: 565 MSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEG 624
Query: 532 FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACM 591
+YFNLM +G P+ EH+ C IDLL R+G L +A I+ MP D VW +L+ C
Sbjct: 625 KYYFNLMK-SFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCR 683
Query: 592 VQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGW 651
+ ++ + + ++ G + L+NIYA +G W E +R M+S + K PG+
Sbjct: 684 IHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGY 743
Query: 652 SRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDIDDLDS 695
S I++ +V F + + Q ++IYR L L + ++ +DS
Sbjct: 744 SAIEIDQKVFRFGAGEENRIQTDEIYRFLGNLQNLTNEEHVVDS 787
Score = 253 bits (645), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 156/527 (29%), Positives = 280/527 (53%), Gaps = 16/527 (3%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G +R +F+ D + LI V A+ L+ R+ V + F+
Sbjct: 48 GSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL-VSETTQISKFVFPSV 106
Query: 115 LKACALN-VNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRN 173
L+ACA + +++ G +HG +K G + + ++LL MY + G + +VFD MP+R+
Sbjct: 107 LRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRD 166
Query: 174 VVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
+V+W+ +++ + G + L F M + D+ T V++ A+ G L R +H
Sbjct: 167 LVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHG 226
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
+ ++ FD+ + NSL TMYSKCG L S R+FE+++ ++ +SWT +I+SY + E
Sbjct: 227 QITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEK 286
Query: 294 AFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGL---VDSLSVANS 350
A +F M +S ++PN T +++S+ + I+ G+ +H +R L +SLS+A
Sbjct: 287 ALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLA-- 344
Query: 351 IMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPN 410
++ +Y++CG+L+ V + R+I++W+++I Y+ G +A M + +P+
Sbjct: 345 LVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPD 404
Query: 411 EFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFY 470
F AS +S C N ++ GKQIH HV+ + ++++LI+MYSK GS+ AS +F
Sbjct: 405 AFTLASSISACENAGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFN 463
Query: 471 ETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDL 530
+ + +V+W +M+ G++++G S EAI LF+ + L + VTF+ V+ ACS G ++
Sbjct: 464 QIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEK 523
Query: 531 G---FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENM 574
G H + K F + +ID+ + G L+ AE + M
Sbjct: 524 GKWVHHKLIISGLKDLFTDTA-----LIDMYAKCGDLNAAETVFRAM 565
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 230/463 (49%), Gaps = 10/463 (2%)
Query: 130 LHGYTVKTGFVN-SVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAG 188
LH + + TG + + L++ Y +G + VF+ P + + +I V
Sbjct: 20 LHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCH 79
Query: 189 HNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGA-LNFGREIHTIMLKRGFDVVSFVA 247
+ + + Q + F VL+A A S L+ G ++H ++K G D + +
Sbjct: 80 LLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIE 139
Query: 248 NSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVK 307
SL MY + G L + ++F+ M RD+++W+T+++S ++ GE A F M + V+
Sbjct: 140 TSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVE 199
Query: 308 PNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIV 367
P+ T +++ A L ++ +H + R ++ NS++ MYSKCG L S+ +
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 368 FHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAIL 427
F + +++ +SW+ +I Y++G + E+A + M + G PN SVLS CG + ++
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLI 319
Query: 428 EQGKQIHAHVMSIGLERT-AMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMING 486
+GK +H + L+ + AL+ +Y++CG + + + +IV+W ++I+
Sbjct: 320 REGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISL 379
Query: 487 YAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLG--FHYFNLMSDKYGF 544
YA G +A+ LF ++ ++PD+ T ++AC +AGLV LG H + +D
Sbjct: 380 YAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD---- 435
Query: 545 VPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLL 587
V + +ID+ ++G + A + + H + V W+++L
Sbjct: 436 VSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH-RSVVTWNSML 477
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/451 (29%), Positives = 234/451 (51%), Gaps = 11/451 (2%)
Query: 45 NSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQM 104
NS L K G L + ++F+ + +++ +SWT +IS Y + S +AL FS + +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI---KS 297
Query: 105 NMDPFILSL--ALKACALNVNVNYGESLHGYTVKTGF-VNSVFVGSALLDMYTKLGKIEL 161
++P +++L L +C L + G+S+HG+ V+ N + AL+++Y + GK+
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 162 GCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASAD 221
V + RN+V+W ++I+ G + L F +M + + D++T A + A +
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 222 SGALNFGREIHTIMLKRGFDVVS-FVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTT 280
+G + G++IH +++ DV FV NSL MYSK G +D + +F ++ R V++W +
Sbjct: 418 AGLVPLGKQIHGHVIRT--DVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNS 475
Query: 281 IITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLG 340
++ + Q G A F M S ++ NE TF A+I A +++ ++ G+ +H ++ G
Sbjct: 476 MLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISG 535
Query: 341 LVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLA 400
L D L +++ MY+KCG L + VF M R I+SWS++I Y G A
Sbjct: 536 LKD-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 401 LMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCG 460
M G +PNE F +VLS CG+ +E+GK + S G+ + + I++ S+ G
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHFACFIDLLSRSG 654
Query: 461 SIKEASQIFYETES-DDIVSWTAMINGYAEH 490
+KEA + E D W +++NG H
Sbjct: 655 DLKEAYRTIKEMPFLADASVWGSLVNGCRIH 685
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 11/277 (3%)
Query: 14 FASSAIACTERRPLLLFQGTQLPVYVSTPEV------NSQLKHLVKSGYLHDARKMFDTM 67
ASS AC L+ G Q+ +V +V NS + KSG + A +F+ +
Sbjct: 408 LASSISAC--ENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQI 465
Query: 68 TQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYG 127
R ++W +++ G+ + +S+EA++LF ++ + M+ ++AC+ ++ G
Sbjct: 466 KHRSVVTWNSMLCGFSQNGNSVEAISLFDYMY-HSYLEMNEVTFLAVIQACSSIGSLEKG 524
Query: 128 ESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRA 187
+ +H + +G + +F +AL+DMY K G + VF M R++VSW+++I
Sbjct: 525 KWVHHKLIISG-LKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMH 583
Query: 188 GHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVA 247
G + F +M S + + F VL A SG++ G+ +M G S
Sbjct: 584 GRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKSFGVSPNSEHF 643
Query: 248 NSLATMYSKCGKLDYSLRLFERMS-TRDVISWTTIIT 283
+ S+ G L + R + M D W +++
Sbjct: 644 ACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVN 680
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 357 bits (915), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 202/654 (30%), Positives = 338/654 (51%), Gaps = 9/654 (1%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEP---QMNMDPFIL 111
G++ DA ++FD M +R+ +SW ++I + S E+ L + E D L
Sbjct: 236 GFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATL 295
Query: 112 SLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPL 171
L CA + G+ +HG+ VK + + +AL+DMY+K G I +F
Sbjct: 296 VTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNN 355
Query: 172 RNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKE--QGDSYTFAIVLKASADSGALNFGR 229
+NVVSW ++ G G +M E + D T + L +
Sbjct: 356 KNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLK 415
Query: 230 EIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMG 289
E+H LK+ F VAN+ Y+KCG L Y+ R+F + ++ V SW +I + Q
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 290 EEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVAN 349
+ + DA ++M+ S + P+ +T +++SA + L ++ G+++H ++R L L V
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYL 535
Query: 350 SIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRP 409
S++++Y CG+L + +F M + ++SW+T+I GY Q G+ + A M G +
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQL 595
Query: 410 NEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIF 469
+ V C + L G++ HA+ + LE A I +LI+MY+K GSI ++S++F
Sbjct: 596 CGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVF 655
Query: 470 YETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVD 529
+ SW AMI GY HG ++EAI LFE++ G PD +TF+GVLTAC+H+GL+
Sbjct: 656 NGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIH 715
Query: 530 LGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMI-ENMPHQKDDVVWSTLLR 588
G Y + M +G P+ +HY C+ID+L RAG+L A ++ E M + D +W +LL
Sbjct: 716 EGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLS 775
Query: 589 ACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKE 648
+C + ++ G A K+ EL P ++ L+N+YA G+W + +VR+ M + K+
Sbjct: 776 SCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKD 835
Query: 649 PGWSRIKVKDQVSAFVSSDRRHSQGEDI---YRMLDLLASRESDIDDLDSLVHD 699
G S I++ +V +FV +R E+I + +L++ S+ D S+ HD
Sbjct: 836 AGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHD 889
Score = 244 bits (624), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/551 (27%), Positives = 264/551 (47%), Gaps = 18/551 (3%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G D+R +FD + ++ W +IS Y + E L F + + D F
Sbjct: 134 GSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCV 193
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
+KACA +V G ++HG VKTG V VFVG+AL+ Y G + ++FD MP RN+
Sbjct: 194 IKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNL 253
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQG----DSYTFAIVLKASADSGALNFGRE 230
VSW ++I G ++E + EM G D T VL A + G+
Sbjct: 254 VSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKG 313
Query: 231 IHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGE 290
+H +K D + N+L MYSKCG + + +F+ + ++V+SW T++ + G+
Sbjct: 314 VHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGD 373
Query: 291 EENAFDAFVRMQES--DVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVA 348
FD +M DVK +E T + + + + ++LH + L+ V + VA
Sbjct: 374 THGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVA 433
Query: 349 NSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPR 408
N+ +A Y+KCG L+ VFHG+ + + SW+ +IGG++Q + + M+ G
Sbjct: 434 NAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLL 493
Query: 409 PNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQI 468
P+ F S+LS C + L GK++H ++ LER + +++++Y CG + +
Sbjct: 494 PDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQAL 553
Query: 469 FYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLV 528
F E +VSW +I GY ++G+ A+ +F ++ + G++ ++ M V ACS +
Sbjct: 554 FDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSL 613
Query: 529 DLG-----FHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVW 583
LG + +L+ D F+ +ID+ + G ++ + + + +K W
Sbjct: 614 RLGREAHAYALKHLLEDD-AFIACS-----LIDMYAKNGSITQSSKVFNGLK-EKSTASW 666
Query: 584 STLLRACMVQG 594
+ ++ + G
Sbjct: 667 NAMIMGYGIHG 677
Score = 185 bits (470), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 130/496 (26%), Positives = 237/496 (47%), Gaps = 18/496 (3%)
Query: 111 LSLALKACALNVNVNYGESLHGY-TVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEM 169
L L L+A ++ G +H + T N + + ++ MY G + VFD +
Sbjct: 87 LGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL 146
Query: 170 PLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKE-QGDSYTFAIVLKASADSGALNFG 228
+N+ W A+I+ R E L F EM + + D +T+ V+KA A + G
Sbjct: 147 RSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIG 206
Query: 229 REIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQM 288
+H +++K G FV N+L + Y G + +L+LF+ M R+++SW ++I +
Sbjct: 207 LAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN 266
Query: 289 GEEENAFDAFVRMQESD----VKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDS 344
G E +F M E + P+ T ++ A I G+ +H ++L L
Sbjct: 267 GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE 326
Query: 345 LSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRR 404
L + N++M MYSKCG +T+ ++F ++++SW+T++GG+S G F+ L M
Sbjct: 327 LVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLA 386
Query: 405 EGP--RPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSI 462
G + +E + + VC + + L K++H + + ++ +A + Y+KCGS+
Sbjct: 387 GGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSL 446
Query: 463 KEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTAC 522
A ++F+ S + SW A+I G+A+ + ++ ++ + GL PDS T +L+AC
Sbjct: 447 SYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSAC 506
Query: 523 SHAGLVDLG--FHYFNLMS--DKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQK 578
S + LG H F + + ++ FV Y ++ L G L + + + M K
Sbjct: 507 SKLKSLRLGKEVHGFIIRNWLERDLFV-----YLSVLSLYIHCGELCTVQALFDAM-EDK 560
Query: 579 DDVVWSTLLRACMVQG 594
V W+T++ + G
Sbjct: 561 SLVSWNTVITGYLQNG 576
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 11/255 (4%)
Query: 46 SQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMN 105
S L + G L + +FD M + +SW T+I+GY++ AL +F R V +
Sbjct: 536 SVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVF-RQMVLYGIQ 594
Query: 106 MDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRV 165
+ + AC+L ++ G H Y +K + F+ +L+DMY K G I +V
Sbjct: 595 LCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKV 654
Query: 166 FDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGAL 225
F+ + ++ SW A+I G G KE + F EM R+ D TF VL A SG +
Sbjct: 655 FNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLI 714
Query: 226 NFGREIHTIMLKRGFDVVSFVAN--SLATMYSKCGKLDYSLRLF-ERMSTR-DVISWTTI 281
+ G + +K F + + + + M + G+LD +LR+ E MS DV W ++
Sbjct: 715 HEGLR-YLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSL 773
Query: 282 ITS-----YVQMGEE 291
++S ++MGE+
Sbjct: 774 LSSCRIHQNLEMGEK 788
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 355 bits (911), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 203/652 (31%), Positives = 332/652 (50%), Gaps = 7/652 (1%)
Query: 55 GYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLA 114
G ++ AR +F ++ + D + L+ G+ +L++F+ + + + + A
Sbjct: 66 GAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFA 125
Query: 115 LKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNV 174
+ A + + G +HG V G + + +GS ++ MY K ++E +VFD MP ++
Sbjct: 126 ISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDT 185
Query: 175 VSWTAIITGLVRAGHNKEGLIYFAEMW-RSKEQGDSYTFAIVLKASADSGALNFGREIHT 233
+ W +I+G + E + F ++ S + D+ T +L A A+ L G +IH+
Sbjct: 186 ILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHS 245
Query: 234 IMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEEN 293
+ K G +V ++YSKCGK+ LF D++++ +I Y GE E
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 294 AFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMA 353
+ F + S + T +++ S +L I +H + L+ + SV+ ++
Sbjct: 306 SLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIY---AIHGYCLKSNFLSHASVSTALTT 362
Query: 354 MYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFA 413
+YSK ++ S +F + + SW+ +I GY+Q G E+A M++ PN
Sbjct: 363 VYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVT 422
Query: 414 FASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETE 473
+LS C + L GK +H V S E + + +ALI MY+KCGSI EA ++F
Sbjct: 423 ITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT 482
Query: 474 SDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFH 533
+ V+W MI+GY HG QEA+++F ++ G+ P VTF+ VL ACSHAGLV G
Sbjct: 483 KKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDE 542
Query: 534 YFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQ 593
FN M +YGF PS +HY CM+D+L RAG L A IE M + VW TLL AC +
Sbjct: 543 IFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIH 602
Query: 594 GDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSR 653
D N R +EK+ EL P G H+ L+NI++A + +AA VR+ + + + K PG++
Sbjct: 603 KDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTL 662
Query: 654 IKVKDQVSAFVSSDRRHSQGEDIYRMLDLLAS--RESDIDDLDSL-VHDAED 702
I++ + F S D+ H Q ++IY L+ L RE+ L +HD E+
Sbjct: 663 IEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEE 714
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 432 QIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHG 491
Q HA ++ G + + L S G+I A IF + D+ + ++ G++ +
Sbjct: 38 QTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNE 97
Query: 492 YSQEAIHLFEKV-PMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEH 550
++ +F + L+P+S T+ ++A S GF D+ G V +
Sbjct: 98 SPHSSLSVFAHLRKSTDLKPNSSTYAFAISAAS-------GFR-----DDRAGRVIHGQA 145
Query: 551 Y--GCMIDLLCRAG---------RLSDAENMIENMPHQKDDVVWSTLL 587
GC +LL + R+ DA + + MP +KD ++W+T++
Sbjct: 146 VVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMP-EKDTILWNTMI 192
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,196,582
Number of Sequences: 539616
Number of extensions: 9957859
Number of successful extensions: 30807
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 372
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 21582
Number of HSP's gapped (non-prelim): 2345
length of query: 702
length of database: 191,569,459
effective HSP length: 125
effective length of query: 577
effective length of database: 124,117,459
effective search space: 71615773843
effective search space used: 71615773843
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)