Citrus Sinensis ID: 005329

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700--

MLLQSTRHRVGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDIDDLDSLVHDAED

cccccccccccccHHHHHHHHHcccccHHccccccccccccHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHcccccHHHHHHHHHHHHccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccHHHHHHHHccccccccccHHHHHHHHHcccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHHccccccccEEHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHHccccccccEEEEEEccEEEEEEccccccccHHHHHHHHHHHHHHcccccccccccccccc

*********VGRLFASSAIACTERRPLLLFQGTQLPVYVSTPEVNSQLKHLVKSGYLHDARKMFDTMTQRDEISWTTLISGYVKAMDSIEALALFSRVWVEPQMNMDPFILSLALKACALNVNVNYGESLHGYTVKTGFVNSVFVGSALLDMYTKLGKIELGCRVFDEMPLRNVVSWTAIITGLVRAGHNKEGLIYFAEMWRSKEQGDSYTFAIVLKASADSGALNFGREIHTIMLKRGFDVVSFVANSLATMYSKCGKLDYSLRLFERMSTRDVISWTTIITSYVQMGEEENAFDAFVRMQESDVKPNEYTFAAIISASANLARIQWGEQLHAHVLRLGLVDSLSVANSIMAMYSKCGQLTSTSIVFHGMIRRDIISWSTIIGGYSQGGYEEEAFEYLALMRREGPRPNEFAFASVLSVCGNMAILEQGKQIHAHVMSIGLERTAMIKSALINMYSKCGSIKEASQIFYETESDDIVSWTAMINGYAEHGYSQEAIHLFEKVPMVGLRPDSVTFMGVLTACSHAGLVDLGFHYFNLMSDKYGFVPSKEHYGCMIDLLCRAGRLSDAENMIENMPHQKDDVVWSTLLRACMVQGDVNCGRHTAEKILELHPSCAGTHITLANIYAAKGRWREAAEVRKMMRSKGVIKEPGWSRIKVKDQVSAFVSSDRRHSQGEDIYRMLDLLASRESDIDDLDSLVHDAED

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
Putative pentatricopeptide repeat-containing protein At3g47840		probable	Q9STS9

Prediction of Enzyme Commission Number

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 141-270
View the alignment between query and template
View the model in PyMOL

Template: 3SPA, chain A
Confidence level:very confident
Coverage over the Query: 243-371
View the alignment between query and template
View the model in PyMOL

Template: 2XPI, chain A
Confidence level:confident
Coverage over the Query: 70-406,474-625
View the alignment between query and template
View the model in PyMOL

Template: 2XPI, chain A
Confidence level:confident
Coverage over the Query: 172-643
View the alignment between query and template
View the model in PyMOL

Template: 3IEG, chain A
Confidence level:confident
Coverage over the Query: 310-429,447-643,670-688
View the alignment between query and template
View the model in PyMOL

Template: 1FCH, chain A
Confidence level:confident
Coverage over the Query: 397-647,669-697
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID	Alignment Graph	Confidence Level	View Alignment and Template
Query
1xi4, chain A		confident	Alignment \| Template Structure