Query 005334
Match_columns 701
No_of_seqs 438 out of 2709
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 22:25:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005334.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005334hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 2E-126 7E-131 1093.3 49.2 612 67-701 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 7E-115 3E-119 1000.3 50.1 598 67-700 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 8.4E-82 2.9E-86 753.7 44.7 524 80-700 7-605 (926)
4 3afg_A Subtilisin-like serine 100.0 7E-60 2.4E-64 533.2 29.2 341 22-548 59-419 (539)
5 1y9z_A Alkaline serine proteas 100.0 2.3E-55 7.9E-60 487.5 27.7 378 79-567 13-436 (441)
6 3t41_A Epidermin leader peptid 100.0 1.3E-55 4.5E-60 494.5 24.7 333 22-548 65-466 (471)
7 2z2z_A TK-subtilisin precursor 100.0 6E-56 2E-60 485.3 18.6 321 22-547 23-392 (395)
8 1r6v_A Subtilisin-like serine 100.0 8.5E-52 2.9E-56 472.6 24.7 350 22-558 52-450 (671)
9 2p4e_P Proprotein convertase s 100.0 4.9E-54 1.7E-58 487.9 5.0 315 8-513 94-422 (692)
10 1dbi_A AK.1 serine protease; h 100.0 6.6E-51 2.3E-55 424.6 22.4 264 74-546 13-279 (280)
11 4h6x_A Thiazoline oxidase/subt 100.0 1.9E-52 6.5E-57 451.3 8.5 285 80-546 21-337 (357)
12 1gci_A Subtilisin; hydrolase, 100.0 2.2E-50 7.7E-55 418.0 20.9 255 80-546 14-269 (269)
13 1r0r_E Subtilisin carlsberg; h 100.0 1.9E-50 6.4E-55 420.1 19.5 256 80-546 14-274 (274)
14 1to2_E Subtilisin BPN'; serine 100.0 4E-50 1.4E-54 419.0 20.3 258 80-547 14-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 1E-49 3.4E-54 415.7 22.8 257 80-546 21-278 (279)
16 3zxy_A Subtilisin-like protein 100.0 2.7E-50 9.1E-55 421.3 15.6 264 86-546 3-274 (282)
17 2x8j_A Intracellular subtilisi 100.0 4.2E-50 1.4E-54 427.6 16.6 264 79-546 30-310 (327)
18 2ixt_A 36KDA protease; serine 100.0 1.4E-48 4.7E-53 414.0 26.0 283 79-541 15-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 6.1E-49 2.1E-53 418.0 18.1 265 79-547 17-317 (320)
20 3lxu_X Tripeptidyl-peptidase 2 100.0 3.6E-48 1.2E-52 460.0 26.7 406 91-699 214-651 (1354)
21 4h6w_A N-terminal cyanobactin 100.0 1.2E-49 4.2E-54 421.4 12.0 270 80-546 11-287 (306)
22 2iy9_A SUBA; toxin, shiga, pla 100.0 5.1E-49 1.7E-53 423.8 16.0 271 79-547 32-329 (347)
23 1wmd_A Protease; alpha-beta hy 100.0 6E-48 2E-52 427.5 18.9 291 80-548 11-319 (434)
24 3lpc_A APRB2; protease, subtil 100.0 6.6E-48 2.2E-52 414.2 18.0 283 79-548 21-338 (340)
25 1sh7_A Extracellular subtilisi 100.0 1.3E-46 4.6E-51 392.5 22.9 235 80-514 19-257 (284)
26 2b6n_A Proteinase K; S binding 100.0 4.6E-46 1.6E-50 387.9 21.8 237 80-514 21-261 (278)
27 2oxa_A Extracellular serine pr 100.0 1.5E-46 5.3E-51 431.9 19.8 298 80-552 60-430 (600)
28 4dzt_A Aqualysin-1, aqualysin- 100.0 7.3E-46 2.5E-50 386.3 20.8 235 80-514 21-259 (276)
29 2pwa_A Proteinase K; structure 100.0 4.2E-46 1.4E-50 387.8 18.1 241 82-543 24-273 (279)
30 1p8j_A Furin precursor; prohor 100.0 4.5E-46 1.6E-50 416.0 18.2 292 79-549 27-332 (471)
31 2id4_A Kexin; KEX2, kexin, fur 100.0 5.6E-45 1.9E-49 409.9 19.7 283 80-549 44-344 (503)
32 2qtw_B Proprotein convertase s 100.0 1.1E-44 3.6E-49 401.4 21.3 246 82-514 18-271 (546)
33 3f7m_A Alkaline serine proteas 100.0 7.4E-45 2.5E-49 379.4 16.6 228 82-514 25-261 (279)
34 3hjr_A Extracellular serine pr 100.0 4.4E-42 1.5E-46 396.1 26.1 316 80-549 60-427 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 2.2E-24 7.5E-29 243.2 10.4 96 173-272 274-383 (552)
36 1ga6_A Serine-carboxyl protein 99.9 4.6E-22 1.6E-26 213.9 10.7 99 174-272 90-206 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 3.4E-10 1.2E-14 126.7 8.9 97 175-272 263-374 (544)
38 2w2n_P Proprotein convertase s 98.7 1.6E-08 5.5E-13 89.4 4.8 61 5-65 53-113 (114)
39 3icu_A E3 ubiquitin-protein li 98.5 3.8E-07 1.3E-11 87.6 11.4 94 317-410 82-187 (194)
40 3cnq_P Subtilisin BPN'; unclea 98.3 9.2E-07 3.2E-11 72.9 6.0 47 22-69 33-79 (80)
41 2qtw_A Proprotein convertase s 98.1 2.2E-06 7.4E-11 76.7 4.9 59 7-65 65-123 (124)
42 1v5i_B POIA1, IA-1=serine prot 97.6 0.0001 3.5E-09 59.9 6.0 44 22-65 29-75 (76)
43 2z30_B TK-subtilisin; thermoco 96.6 0.0022 7.4E-08 50.2 4.8 42 22-64 22-63 (65)
44 2ek8_A Aminopeptidase; metallo 95.9 0.035 1.2E-06 60.2 11.4 70 328-397 110-182 (421)
45 3iib_A Peptidase M28; YP_92679 95.3 0.063 2.2E-06 58.7 10.5 102 301-410 105-227 (444)
46 3kas_A Transferrin receptor pr 95.0 0.042 1.4E-06 62.6 8.5 69 329-397 128-230 (640)
47 3fed_A Glutamate carboxypeptid 94.4 0.037 1.3E-06 63.7 5.8 71 328-398 150-268 (707)
48 2ys4_A Hydrocephalus-inducing 92.1 0.37 1.3E-05 42.3 7.5 72 616-696 41-114 (122)
49 3lxu_X Tripeptidyl-peptidase 2 88.3 0.21 7.3E-06 60.7 3.2 25 86-110 32-56 (1354)
50 1y9z_A Alkaline serine proteas 81.6 0.94 3.2E-05 49.2 4.1 32 416-455 181-212 (441)
51 3idu_A Uncharacterized protein 71.2 11 0.00038 33.1 7.3 50 616-670 33-84 (127)
52 2e6j_A Hydin protein; PAPD, st 68.0 4.3 0.00015 34.5 3.9 67 616-686 26-93 (112)
53 2r39_A FIXG-related protein; s 64.6 30 0.001 29.6 8.8 54 616-672 31-85 (118)
54 3qbt_B Inositol polyphosphate 56.8 47 0.0016 29.4 8.8 82 616-700 43-137 (140)
55 2qsv_A Uncharacterized protein 51.3 80 0.0027 30.2 10.2 66 616-686 19-85 (220)
56 1wgl_A TOLL-interacting protei 43.7 15 0.00053 27.5 2.8 36 477-512 3-38 (59)
57 1w8o_A Bacterial sialidase; 3D 42.6 1.6E+02 0.0055 32.5 12.4 54 616-673 373-428 (601)
58 2l0d_A Cell surface protein; s 38.5 99 0.0034 26.4 7.5 23 616-638 19-43 (114)
59 3qis_A Inositol polyphosphate 34.2 2.1E+02 0.0072 29.6 10.9 82 616-700 46-140 (366)
60 2x41_A Beta-glucosidase; hydro 33.5 33 0.0011 39.5 4.8 73 590-671 595-677 (721)
61 3abz_A Beta-glucosidase I; gly 29.8 74 0.0025 37.2 7.0 44 469-512 618-662 (845)
62 2kq1_A BH0266 protein; solutio 29.5 15 0.00053 31.6 0.9 32 640-671 78-110 (119)
63 3isy_A Bsupi, intracellular pr 29.1 1.8E+02 0.0062 25.0 7.6 52 616-669 18-87 (120)
64 3zyz_A Beta-D-glucoside glucoh 28.1 83 0.0028 36.0 6.9 55 616-671 613-674 (713)
65 1z9l_A Vesicle-associated memb 26.9 1.5E+02 0.0051 25.5 6.9 52 616-671 27-79 (128)
66 1m1s_A WR4; structural genomic 25.7 1.6E+02 0.0055 25.2 6.6 49 619-671 26-75 (116)
67 3sd2_A Putative member of DUF3 25.2 2.9E+02 0.01 22.9 8.0 65 597-685 35-100 (101)
68 1ni7_A ER75, hypothetical prot 23.9 51 0.0017 29.9 3.3 31 474-505 80-110 (155)
69 1row_A SSP-19, MSP-domain prot 23.6 2.5E+02 0.0085 23.5 7.4 49 619-671 18-67 (109)
70 1wic_A Hypothetical protein ri 21.2 2E+02 0.0068 25.7 6.7 51 617-671 36-87 (152)
71 1msp_A MSP, major sperm protei 20.5 1.9E+02 0.0067 24.8 6.3 50 618-671 27-77 (126)
72 3g0m_A Cysteine desulfuration 20.1 49 0.0017 29.5 2.3 33 471-504 70-102 (141)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=2e-126 Score=1093.34 Aligned_cols=612 Identities=39% Similarity=0.652 Sum_probs=551.3
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecc-------cCC--------
Q 005334 67 TTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEA-------VGP-------- 131 (701)
Q Consensus 67 ~~~s~~~~gl~~~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~-------~~~-------- 131 (701)
|+++|+|+||.+..++|..+.+|+||+|||||||||++||+|.+.+++|+|.+|+|.|.... +.+
T Consensus 1 Tt~s~~flgl~~~~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig~~~f~ 80 (649)
T 3i6s_A 1 TTHTSDFLKLNPSSGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIGANYFN 80 (649)
T ss_dssp CCSHHHHTTCCSSSSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEEEEECC
T ss_pred CCCChHHcCCCCchhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceeeeEecc
Confidence 57899999998778899999999999999999999999999999999999999999993210 001
Q ss_pred -------ccCCCCCCCCCCCCCChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHH
Q 005334 132 -------IDETAESKSPRDDDGHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDK 204 (701)
Q Consensus 132 -------~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ 204 (701)
.+...+..+++|..||||||||||||+.+.+.+++|++.|++.||||+|+|++||+|+..|+..+++++||++
T Consensus 81 ~~~~~~~~~~~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~Ai~~ 160 (649)
T 3i6s_A 81 KGILANDPTVNITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEGTFTSDLIAAMDQ 160 (649)
T ss_dssp HHHHHHCTTCCCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTEECHHHHHHHHHH
T ss_pred CcccccccccccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCCCCHHHHHHHHHH
Confidence 1122345678999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHcCCeEEEEeccCCCCCCccCHHHHHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCC
Q 005334 205 AIEDGVNVMSMSIGGGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGN 284 (701)
Q Consensus 205 ai~~gvdVInlSlG~~~~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~ 284 (701)
|+++|+||||||||....+++.+.+++++++|+++||+||+||||+|+...++++.+||+|+|||++.||.|...+.++|
T Consensus 161 A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgAst~dr~f~~~~~lgn 240 (649)
T 3i6s_A 161 AVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVASGHTDRTFAGTLTLGN 240 (649)
T ss_dssp HHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEEEECSCEEEEEEEETT
T ss_pred HHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEeeeecccceeeEEEeCC
Confidence 99999999999999887778889999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEeecCCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCc--cceEEEEecCCCchhhhhHHHhHcCceEEEE
Q 005334 285 GKSFSGVSLYSRRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKV--AGKIVVCDRGGNSRVEKGVEVKDAGGVGMIL 362 (701)
Q Consensus 285 g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~--~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~ 362 (701)
++++.|.++++.... ...+|+++.. ....|.+..+++..+ +||||+|+++.+.+.+|..+++++|+.|+|+
T Consensus 241 g~~~~g~sl~~~~~~-~~~~plv~~~------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~ 313 (649)
T 3i6s_A 241 GLKIRGWSLFPARAF-VRDSPVIYNK------TLSDCSSEELLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFI 313 (649)
T ss_dssp SCEEEEECCCSSCBC-EEEEEEECCT------TTTTCCCHHHHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEE
T ss_pred CcEEeeeecccCccc-CcceeeEecc------cccccccccccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEE
Confidence 999999999987653 6789999965 356899988888888 9999999999999999999999999999999
Q ss_pred eecCCCCccccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEE
Q 005334 363 TNTDSYGEELVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLI 442 (701)
Q Consensus 363 ~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~ 442 (701)
+|.. .....+.+.+|+++++..+++.|++|++++.+++++|.+..+..+..+++.++.||||||+...+++|||||+
T Consensus 314 ~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~FSSrGP~~~~~~ilKPDI~ 390 (649)
T 3i6s_A 314 SEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAASSARGPSRSYLGISKPDIL 390 (649)
T ss_dssp CCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECTTSCCSSCTTCTTSCSCCEE
T ss_pred ecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccccCCCCCCCCCCCccCCeEE
Confidence 9986 4556678899999999999999999999999999999999999998999999999999999988899999999
Q ss_pred ecCCcEEecccCCCCCCCCCCCc-ccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccc
Q 005334 443 APGVNILAGWTGAVGPTGLESDK-RHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLL 521 (701)
Q Consensus 443 APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~ 521 (701)
|||++|+++|+....+.....+. +...|..+||||||||||||+||||||+||+|||++||++||+||+++++.+.++.
T Consensus 391 APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~IksaLmtTA~~~~~~g~~i~ 470 (649)
T 3i6s_A 391 APGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAIRSAMMTTADPLDNTRKPIK 470 (649)
T ss_dssp EECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCBCTTSSBCE
T ss_pred eCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHHHHHHhcccccccCCCCccc
Confidence 99999999999865544333332 44689999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCccccCccccCCCCccccCChhhHHhhhhcCCCCcceEEEeeccccc--ccCCCCCCCCCCCCCceE
Q 005334 522 DISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFQIKQATNRDFA--CLSSKTYSLGDVNYPSFS 599 (701)
Q Consensus 522 ~~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~--c~~~~~~~~~~ln~ps~~ 599 (701)
+...+.++++|+||+|+|||.+|++||||||++++||++|||++||+.++|+.|++.+++ |+. .+.+||||||+
T Consensus 471 ~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~~~~~~~C~~----~~~~lNyPs~~ 546 (649)
T 3i6s_A 471 DSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIARSSASHNCSN----PSADLNYPSFI 546 (649)
T ss_dssp ETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHTTTSCC-CCC----CCCCCCCSSEE
T ss_pred ccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeecCCCcCCCCC----chhhcCCCcEE
Confidence 876678899999999999999999999999999999999999999999999999998777 975 46799999999
Q ss_pred eec-cCCCCCcCCcCccee--EEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCC
Q 005334 600 VPF-ETASGTWGGVGATST--VKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPS 675 (701)
Q Consensus 600 ~~~-~~~~~~~~~~~~~~~--~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~ 675 (701)
+.+ +.... .. ++|+|||||||+..+ |+++|+ .|+|++|+|+|++|+|++.+|+++|+|||+......
T Consensus 547 ~~~~~~~~~--------~~~~~~~~Rtvtnvg~~~~~y~~~v~-~p~g~~v~v~P~~l~f~~~~~~~~f~v~~~~~~~~~ 617 (649)
T 3i6s_A 547 ALYSIEGNF--------TLLEQKFKRTVTNVGKGAATYKAKLK-APKNSTISVSPQILVFKNKNEKQSYTLTIRYIGDEG 617 (649)
T ss_dssp EEECCSSCC--------CCEEEEEEEEEEECC--CEEEEEEEE-CCTTEEEEEESSEEEECC-CCEEEEEEEEEECCC--
T ss_pred eecccCCCC--------ccceEEEEEEEEEeCCCCcEEEEEEe-cCCCCEEEEECCEEEEecCCCEEEEEEEEEecccCC
Confidence 987 42110 12 899999999999888 999999 999999999999999988999999999999875556
Q ss_pred CCeEEEEEEEEc--CCeEEEeeEEEEeC
Q 005334 676 GTTSFARLQWSD--GKHVVGSPIAFSWT 701 (701)
Q Consensus 676 ~~~~~G~~~~~~--~~~~v~~P~~v~~~ 701 (701)
+.|.||+|+|+| ++|.||+||+|++.
T Consensus 618 ~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 618 QSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp -CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 678999999998 99999999999863
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=7.5e-115 Score=1000.34 Aligned_cols=598 Identities=43% Similarity=0.723 Sum_probs=498.0
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecc---------------cCC
Q 005334 67 TTRTPEFLGLGKSETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEA---------------VGP 131 (701)
Q Consensus 67 ~~~s~~~~gl~~~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~---------------~~~ 131 (701)
||++|+|+||+ ..+|.+..+|+||+|||||||||++||+|.|+++.+++.+|+|.|.... .+.
T Consensus 1 tt~s~~flGl~--~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~~~~~n~k~ig~~~~~~~~ 78 (621)
T 3vta_A 1 TTRSWDFLGFP--LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSNNFRCNRKIIGARSYHIGR 78 (621)
T ss_dssp CCSHHHHTTCC--TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSSSCCCCSSEEEEEECCCSS
T ss_pred CCCChhHcCCC--ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCCCcccCcceeeeeecccCC
Confidence 68999999996 4689999999999999999999999999999999999999999983211 111
Q ss_pred ccCCCCCCCCCCCCCChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHHcCCe
Q 005334 132 IDETAESKSPRDDDGHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIEDGVN 211 (701)
Q Consensus 132 ~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~~gvd 211 (701)
.....+..+|+|.+||||||||||||+.+.+.+.+|.+.+.++||||+|+|++||+|++.||..+++++||++|+++|+|
T Consensus 79 ~~~~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g~~~~di~~a~~~a~~~g~d 158 (621)
T 3vta_A 79 PISPGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDGCSDTDILAAYDDAIADGVD 158 (621)
T ss_dssp SCCTTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTEECHHHHHHHHHHHHHHTCS
T ss_pred ccCCCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCCCCHHHHHHHHHHHHHhCCC
Confidence 12233456789999999999999999999888888988899999999999999999999999999999999999999999
Q ss_pred EEEEeccCCC-CCCccCHHHHHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEE
Q 005334 212 VMSMSIGGGL-TDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSG 290 (701)
Q Consensus 212 VInlSlG~~~-~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g 290 (701)
|||||||+.. ..++.+++++++++|+++||+||+||||+|+...++++.+||+++|++++.+|.|...+.++++..+.+
T Consensus 159 Vin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~ast~d~~~~~~~~~~~~~~~~~ 238 (621)
T 3vta_A 159 IISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAASTMDRKFVTQVQIGNGQSFQG 238 (621)
T ss_dssp EEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEEECCSEEEEEEEEETTSCEEEE
T ss_pred EEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEEeeccccceeeEEeccCceeee
Confidence 9999999865 456678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCCCCCceeeEEEcCCCCC----CcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecC
Q 005334 291 VSLYSRRPLSGSMVPIVDAANVSS----TSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTD 366 (701)
Q Consensus 291 ~s~~~~~~~~~~~~~l~~~~~~~~----~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 366 (701)
.+++... ...+++++..+... ......|....+++..++|||++|+++. ..+.......|+.++|++++.
T Consensus 239 ~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~---~~~~~~~~~~Ga~gvi~~~~~ 312 (621)
T 3vta_A 239 VSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF---GPHEFFKSLDGAAGVLMTSNT 312 (621)
T ss_dssp BCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC---CHHHHHHHHTTCSEEEEECSC
T ss_pred eecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecCC---ChhHHhhhhcceeEEEEEecC
Confidence 8876543 46778887665432 2345679999999999999999998653 356677788899999998875
Q ss_pred CCCccccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCC
Q 005334 367 SYGEELVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGV 446 (701)
Q Consensus 367 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~ 446 (701)
.. ..+.+.+|...++..++..++.|+..+..+.+.+....+. .....+.++.||||||+...+++|||||+|||+
T Consensus 313 ~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~-~~~~~~~va~FSSrGP~~~~~~ilKPDI~APG~ 387 (621)
T 3vta_A 313 RD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTI-LNASAPVVVSFSSRGPNRATKDVIKPDISGPGV 387 (621)
T ss_dssp CS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEE-ECTTCCCBCTTSCCCSCTTCTTSCSCCEEEECS
T ss_pred CC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEe-ccCCCCceeeecCCCCCCCCCCeeccccccCCc
Confidence 43 3456789999999999999999999999888887555444 346789999999999998888999999999999
Q ss_pred cEEecccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCC
Q 005334 447 NILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTG 526 (701)
Q Consensus 447 ~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~ 526 (701)
+|+++|+....... ..+...|..|||||||||||||+||||||+||+|||++||++||+||++++.. .
T Consensus 388 ~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaLmtTA~~~~~~---------~ 455 (621)
T 3vta_A 388 EILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSALMTTASPMNAR---------F 455 (621)
T ss_dssp SEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTCBCCCTT---------T
T ss_pred ceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHHHhcCCccccc---------C
Confidence 99999987543222 23446799999999999999999999999999999999999999999988654 3
Q ss_pred CCCCCCCCCccccCccccCCCCccccCChhhHHhhhhcCCCCcceEEEeecccccccCCCCCCCCCCCCCceEeeccCCC
Q 005334 527 QPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFQIKQATNRDFACLSSKTYSLGDVNYPSFSVPFETAS 606 (701)
Q Consensus 527 ~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~ 606 (701)
.++.+|+||+|+|||.+|++||||||++.+||+.|||+++|+.++|+.+++....|.........+||||||++.+....
T Consensus 456 ~~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lN~pS~~v~~~~~~ 535 (621)
T 3vta_A 456 NPQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITGDYSACTSGNTGRVWDLNYPSFGLSVSPSQ 535 (621)
T ss_dssp CTTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC-----------------------------CGGGSCCSSEEEECCSSC
T ss_pred CCCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeeccccccCCCCcCcccccccccEEEEccCCC
Confidence 45678999999999999999999999999999999999999999999999988889776555678999999999765322
Q ss_pred CCcCCcCcceeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCCCCeEEEEEEE
Q 005334 607 GTWGGVGATSTVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPSGTTSFARLQW 685 (701)
Q Consensus 607 ~~~~~~~~~~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~ 685 (701)
. .+++|+|||||||+..+ |+++++ .|+|++|+|+|++|+|++.+|+++|+|||+.. ..+.|+||+|+|
T Consensus 536 ~--------~~~t~~rtvtnvg~~~~ty~~~v~-~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~~--~~~~~~~g~l~w 604 (621)
T 3vta_A 536 T--------FNQYFNRTLTSVAPQASTYRAMIS-APQGLTISVNPNVLSFNGLGDRKSFTLTVRGS--IKGFVVSASLVW 604 (621)
T ss_dssp C--------EEEEEEEEEEECSSSCEEEEEEEE-CCSSEEEEEESSEEEECSTTCEEEEEEEEEEC--CCSSEEEEEEEE
T ss_pred c--------eEEEEEEEEEccCCCCeEEEEEEE-CCCCcEEEEecCEEEEcCCCcEEEEEEEEEec--CCCceEEEEEEE
Confidence 1 68999999999999888 999999 99999999999999999899999999999864 567899999999
Q ss_pred EcCCeEEEeeEEEEe
Q 005334 686 SDGKHVVGSPIAFSW 700 (701)
Q Consensus 686 ~~~~~~v~~P~~v~~ 700 (701)
+|++|.|||||+|+.
T Consensus 605 ~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 605 SDGVHYVRSPITITS 619 (621)
T ss_dssp ECSSCCCEEEEEEEC
T ss_pred EcCCEEEEeCEEEEE
Confidence 999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=8.4e-82 Score=753.73 Aligned_cols=524 Identities=23% Similarity=0.292 Sum_probs=414.1
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEe-----------------cccCCc----cCCCCC
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYE-----------------EAVGPI----DETAES 138 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~-----------------~~~~~~----~~~~~~ 138 (701)
..+|..+.+|+||+|||||||||++||+|.+. ..|++.|.. .++.++ +.....
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 45899899999999999999999999999853 345444310 001111 111122
Q ss_pred CCCCCCCCChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCC--CChHHHHHHHHHHHHcCCeEEEEe
Q 005334 139 KSPRDDDGHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAG--CFGSDILAGMDKAIEDGVNVMSMS 216 (701)
Q Consensus 139 ~~~~D~~gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~ai~~gvdVInlS 216 (701)
. ..|..||||||||||||+.+.+.+. .+.+.||||+|+|++||+|+..+ +...++++||++|+++|+||||||
T Consensus 81 ~-~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~~~~~~~i~~Ai~~Ai~~gvdVIn~S 155 (926)
T 1xf1_A 81 K-TAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGLADYARNYAQAIRDAINLGAKVINMS 155 (926)
T ss_dssp C-CCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred C-CCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCCCCcHHHHHHHHHHHHHhCCcEEEEC
Confidence 2 2388999999999999997655432 24569999999999999998876 566789999999999999999999
Q ss_pred ccCCC--CCCccCHHHHHHHHHHHCCCEEEEecCCCCCC-------------CCcccc--CCCceEEecCCccCceeeeE
Q 005334 217 IGGGL--TDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPY-------------ANSISN--VAPWITTVGAGTLDRNFPTY 279 (701)
Q Consensus 217 lG~~~--~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~-------------~~~~~~--~ap~vitVgAst~~~~~~~~ 279 (701)
||+.. ...+.+.++.++++|.++||+||+||||+|+. ..++.+ .+||+|+|||++.++.+...
T Consensus 156 lG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~~~~vitVgA~~~~~~~~~~ 235 (926)
T 1xf1_A 156 FGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAAADSTLTVASYSPDKQLTET 235 (926)
T ss_dssp CSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTTTCCSEEEEEEBCSEEEEEE
T ss_pred CCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCcccCCceEEEeccccccccccc
Confidence 99864 34456788889999999999999999999963 222333 48999999999999999998
Q ss_pred EEc-CCCcEEEEEEeecCCCC-CCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCc
Q 005334 280 VSL-GNGKSFSGVSLYSRRPL-SGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGG 357 (701)
Q Consensus 280 ~~l-~~g~~~~g~s~~~~~~~-~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga 357 (701)
+.+ +++....+.+++....+ ....+++++... .|.+..+ .+++||||+|+|+.|.+.+|..+++++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~--------g~~~~~~--~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga 305 (926)
T 1xf1_A 236 VRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR--------GTKEDDF--KDVKGKIALIERGDIDFKDKIAKAKKAGA 305 (926)
T ss_dssp EEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT--------SCSTTTT--TTCTTSEEEEECCSSCHHHHHHHHHHTTC
T ss_pred eEEEcCCCcceeeEEEecCCCCCCceEEEEECCC--------CCCccch--hhcCCeEEEEECCCCCHHHHHHHHHhCCC
Confidence 888 67666666666543332 456899998754 3766666 68999999999999999999999999999
Q ss_pred eEEEEeecCCCCccc-cccccccceEEechhhHHHHHHhHhcCCCCeEEEEeccee--ecccCCCceecccCCCCCCCCC
Q 005334 358 VGMILTNTDSYGEEL-VADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQ--LGIQPSPVVAAFSSRGPNPITP 434 (701)
Q Consensus 358 ~g~i~~n~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~a~fSS~GP~~~~~ 434 (701)
.|+|++|+....... ......+|+..++..++..|++ ++.++|.+..+. ......+.++.||||||+. +
T Consensus 306 ~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~------~~~~ti~~~~~~~~~~~~~~~~~a~FSSrGp~~--~ 377 (926)
T 1xf1_A 306 VGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD------NPQKTITFNATPKVLPTASGTKLSRFSSWGLTA--D 377 (926)
T ss_dssp SEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH------CSSCEEEECSSCEEEECSSCSBCCTTSCCCBCT--T
T ss_pred cEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh------CCceEEEecccceecccCCcceeccccCCCCCC--C
Confidence 999999986543322 3446789999999999998874 355667666654 4556688999999999996 7
Q ss_pred CCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHH----hhCCCCCHHH----HHHHH
Q 005334 435 EILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLK----AAHPEWSPSA----IKSAL 506 (701)
Q Consensus 435 ~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~----~~~P~~sp~~----Ik~~L 506 (701)
+++||||+|||++|+++++++ .|..+||||||||||||+||||+ +.||+|+|+| ||++|
T Consensus 378 ~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~~k~~~P~~sp~~~~~~Iks~L 444 (926)
T 1xf1_A 378 GNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQYETQYPDMTPSERLDLAKKVL 444 (926)
T ss_dssp SCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHHHHHSSSSSHHHHHHHHHHHHH
T ss_pred CccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHH
Confidence 999999999999999999764 79999999999999999999995 5699999997 99999
Q ss_pred HhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCCCCccccCChhhHHhhhhcCCCCcceEEEeecccccccCCC
Q 005334 507 MTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDYSSFQIKQATNRDFACLSSK 586 (701)
Q Consensus 507 ~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~~~~~~~~~~~~~~~c~~~~ 586 (701)
|+||++++..+. ...+++++||+|+||+.+|++|.+ |||..+++..
T Consensus 445 ~~TA~~~~~~~~-------~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~~~~~~---------------- 490 (926)
T 1xf1_A 445 MSSATALYDEDE-------KAYFSPRQQGAGAVDAKKASAATM-----------YVTDKDNTSS---------------- 490 (926)
T ss_dssp HHHSBCCEEGGG-------TEECCHHHHTTCBCCHHHHHHCSE-----------EEEESSSSCS----------------
T ss_pred HhcCCCcccCCC-------CccCChhccCCCccCHHHhcCCCe-----------EEEcCCCCcc----------------
Confidence 999998753321 235678899999999999999855 6787765332
Q ss_pred CCCCCCCCCCceEeeccCCCCCcCCcCcceeEEEEEEEeeCCCCC--e-EEEEEEe-cCCceEEEEeeCeEEEeec----
Q 005334 587 TYSLGDVNYPSFSVPFETASGTWGGVGATSTVKYTRTLTNVGTPT--T-YMVSVSS-QSTSVKILVEPESLSFSRQ---- 658 (701)
Q Consensus 587 ~~~~~~ln~ps~~~~~~~~~~~~~~~~~~~~~~~~rtvtnv~~~~--~-y~~~v~~-~p~g~~v~v~p~~l~~~~~---- 658 (701)
+|.+..+ . .+++++|||||+|+.. . |++++.. .|.+..++|+|..|.|...
T Consensus 491 ----------~i~l~~~--~---------~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~~l~~~~~~~vt 549 (926)
T 1xf1_A 491 ----------KVHLNNV--S---------DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPKVLYETSWQKIT 549 (926)
T ss_dssp ----------CEEEEEE--C---------SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEEEEEECCCEEEE
T ss_pred ----------eeecccc--C---------ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccceeEeccCCeEE
Confidence 2232222 1 4688999999999853 4 8888872 3789999999987776544
Q ss_pred ---ceeEEEEEEEEeee--------CCCCCeEEEEEEEE--cCCeE-EEeeEEEEe
Q 005334 659 ---YEKKSYVVTFTASS--------MPSGTTSFARLQWS--DGKHV-VGSPIAFSW 700 (701)
Q Consensus 659 ---~~~~~~~vt~~~~~--------~~~~~~~~G~~~~~--~~~~~-v~~P~~v~~ 700 (701)
||+++|+|||+... ++.+.|+||+|+|+ +++|. ||+||++..
T Consensus 550 v~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 550 IPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp ECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred ECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 99999999999751 34667899999999 67665 999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=7e-60 Score=533.17 Aligned_cols=341 Identities=29% Similarity=0.471 Sum_probs=273.4
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHh-----------hcCCCeEEEEeCceeccCCCCC--CcccCCCCCCCCCCCCCC
Q 005334 22 SAAMLYTYKNVIHGFSTRLTAKEAESL-----------QKQPGIVSVLPEVRYELHTTRT--PEFLGLGKSETLFPTSEV 88 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~~~~~~L-----------~~~p~V~~V~~~~~~~~~~~~s--~~~~gl~~~~~~~~~~~~ 88 (701)
..+++|+|+ .|+||+++++++++++| +++|+|++|++++.+++..... ...+...+...+|..+.+
T Consensus 59 g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~~~~~~~~~V~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (539)
T 3afg_A 59 GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGYFGNAQLSGVQFIQEDYVVKVAVETEGLDESAAQVMATNMWNLGYD 137 (539)
T ss_dssp TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC---CCCCTTEEEEEECCEEECC-----------CCBCSCCBCCSCC
T ss_pred CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccccccccCCCeeEEEecccccccCccccCCccccccCcHhHHhcCCC
Confidence 468999997 79999999999999999 8999999999999988754321 111222234678999999
Q ss_pred CCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccCCCccccc
Q 005334 89 QSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVNGASLFGF 168 (701)
Q Consensus 89 G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~~~G~ 168 (701)
|+||+|||||||||++||+|.++.. + .++. ......+.|.+||||||||||||+....
T Consensus 138 G~gv~VaViDtGid~~Hpdl~~~i~--------~-~~d~-------~~~~~~~~D~~gHGThVAgiiag~~~~~------ 195 (539)
T 3afg_A 138 GSGITIGIIDTGIDASHPDLQGKVI--------G-WVDF-------VNGKTTPYDDNGHGTHVASIAAGTGAAS------ 195 (539)
T ss_dssp CTTCEEEEEESBCCTTSGGGTTTEE--------E-EEET-------TTCCSSCCBSSSHHHHHHHHHHCCCGGG------
T ss_pred CCCcEEEEEecCCCCCChHHhCCEe--------e-eEEC-------CCCCCCCCCCCCCHHHHHHHHhCcCccC------
Confidence 9999999999999999999986521 1 1111 1122357889999999999999974321
Q ss_pred CCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc----CCeEEEEeccCCCCCCccCHHHHHHHHHHHCCCEE
Q 005334 169 ASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED----GVNVMSMSIGGGLTDYYRDTVAIGAFTAMAQGIFV 243 (701)
Q Consensus 169 ~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~----gvdVInlSlG~~~~~~~~d~i~~a~~~a~~~Gi~v 243 (701)
.|.+.||||+|+|+.+|+++..| +..+++++||+||+++ |++|||||||........+.+..++.+|.++|++|
T Consensus 196 -~g~~~GvAp~A~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~Gvlv 274 (539)
T 3afg_A 196 -NGKYKGMAPGAKLVGIKVLNGQGSGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVV 274 (539)
T ss_dssp -TTTTCCSCTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEE
T ss_pred -CCCEEEECCCCEEEEEEeecCCCCcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEE
Confidence 23458999999999999998877 7889999999999975 99999999998765556788899999999999999
Q ss_pred EEecCCCCCCCC--ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCCcCCCcc
Q 005334 244 SCSAGNGGPYAN--SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSSTSSGNLC 321 (701)
Q Consensus 244 V~AAGN~G~~~~--~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C 321 (701)
|+||||+|+... ..+..++++|+|||++
T Consensus 275 V~AAGN~g~~~~~~~~Pa~~~~vitVgA~~-------------------------------------------------- 304 (539)
T 3afg_A 275 VVAAGNSGPNKYTVGSPAAASKVITVGAVD-------------------------------------------------- 304 (539)
T ss_dssp EEECCSCCSSSSCCCTTTTCSSSEEEEEEC--------------------------------------------------
T ss_pred EEECCCCCCCCCcccCCccCCceEEEeeec--------------------------------------------------
Confidence 999999998644 3456788999999831
Q ss_pred CCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHhHhcCCC
Q 005334 322 MTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNYISSDPG 401 (701)
Q Consensus 322 ~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 401 (701)
T Consensus 305 -------------------------------------------------------------------------------- 304 (539)
T 3afg_A 305 -------------------------------------------------------------------------------- 304 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccchhh
Q 005334 402 PMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCP 481 (701)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP 481 (701)
..+.++.||||||+. ++++||||+|||++|+++++..... .+.....|..++|||||||
T Consensus 305 ---------------~~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~----~~~~~~~y~~~sGTSmAaP 363 (539)
T 3afg_A 305 ---------------KYDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSM----GQPINDYYTAAPGTAMATP 363 (539)
T ss_dssp ---------------TTSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCC----SEECSSSEEEECSHHHHHH
T ss_pred ---------------CCcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCC----CCCCcccccccCchHHHHH
Confidence 112678999999998 6899999999999999998764211 0111235999999999999
Q ss_pred hHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCCCC
Q 005334 482 HVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPG 548 (701)
Q Consensus 482 ~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~g 548 (701)
||||++|||+|++|+|+|++||++|++||++++..+ .+++.||+|+||+.+|++..
T Consensus 364 ~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 364 HVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 999999999999999999999999999999875221 23458999999999999843
No 5
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=2.3e-55 Score=487.46 Aligned_cols=378 Identities=26% Similarity=0.368 Sum_probs=275.9
Q ss_pred CCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhccc
Q 005334 79 SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGS 158 (701)
Q Consensus 79 ~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~ 158 (701)
++.+|..+ |+||+|||||||||++||+|.++ .|.+.++ ........+.|..||||||||||+|.
T Consensus 13 ~~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~-------~~~~~~~-------~~~~~~~~~~d~~gHGT~vAgiia~~ 76 (441)
T 1y9z_A 13 ATVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN-------NVTGTNN-------SGTGNWYQPGNNNAHGTHVAGTIAAI 76 (441)
T ss_dssp CSSSCCTT--GGGCEEEEEESCCCTTSTTTTTS-------EEEECCC-------TTSCCTTCCCSSCCHHHHHHHHHHCC
T ss_pred hhhhhhcC--CCCcEEEEEcCCCCCCChhHhcC-------cccCccc-------CCCCCCCCCCCCCCcHHHHHHHHhcc
Confidence 35688765 77999999999999999999875 2222211 01112335678899999999999997
Q ss_pred ccCCCcccccCCCceeeecCCC--eEEEEEeecCCC-CChHHHHHHHHHHHHc-CCeEEEEeccCCCCCCccCHHHHHHH
Q 005334 159 VVNGASLFGFASGTARGMAAQA--RVATYKVCWLAG-CFGSDILAGMDKAIED-GVNVMSMSIGGGLTDYYRDTVAIGAF 234 (701)
Q Consensus 159 ~~~~~~~~G~~~g~~~GvAP~A--~l~~~kv~~~~g-~~~~~i~~ai~~ai~~-gvdVInlSlG~~~~~~~~d~i~~a~~ 234 (701)
... .| +.||||+| +|+.+|+++..| +..+++++||+||+++ |+||||||||.... ...+..++.
T Consensus 77 ~~~----~g-----~~GvAP~a~~~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~g~~Vin~S~G~~~~---~~~~~~ai~ 144 (441)
T 1y9z_A 77 ANN----EG-----VVGVMPNQNANIHIVKVFNEAGWGYSSSLVAAIDTCVNSGGANVVTMSLGGSGS---TTTERNALN 144 (441)
T ss_dssp CSS----SB-----CCCSSCSSCSEEEEEECEETTEECCSSCHHHHHHHHHHTTCCSEEEECCCBSCC---BHHHHHHHH
T ss_pred cCC----CC-----ceEecCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHHhcCCcEEEeCCCCCCC---CHHHHHHHH
Confidence 521 12 48999995 999999999877 7888999999999999 99999999998532 345666777
Q ss_pred HHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEc-------------------CCCc----EEEEE
Q 005334 235 TAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSL-------------------GNGK----SFSGV 291 (701)
Q Consensus 235 ~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l-------------------~~g~----~~~g~ 291 (701)
+|.++|++||+||||+|+....++...||+|+|||++.+.....+... +++. .+.|.
T Consensus 145 ~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~vdv~ApG~~i~s~~~~g~g~~~~~~~~G~ 224 (441)
T 1y9z_A 145 THYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQVEISGPGEAILSTVTVGEGRLADITIGGQ 224 (441)
T ss_dssp HHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTTEEEEEECSSEEEECSTTCEEEEEEEETTE
T ss_pred HHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCceEEEeccCCeeccccCCCcccceeecccc
Confidence 899999999999999998877888889999999998876542211111 2221 22233
Q ss_pred EeecCCCCCCc-eee--EEEcCCCC---CCcCCCccCCC--CCCCCCccceEEEEecCCC-----chhhhhHHHhHcCce
Q 005334 292 SLYSRRPLSGS-MVP--IVDAANVS---STSSGNLCMTG--SLIPAKVAGKIVVCDRGGN-----SRVEKGVEVKDAGGV 358 (701)
Q Consensus 292 s~~~~~~~~~~-~~~--l~~~~~~~---~~~~~~~C~~~--~~~~~~~~gkiv~~~~g~~-----~~~~~~~~~~~~Ga~ 358 (701)
+++.....+.. .++ +.+..... .......|... .++..+++|||++|+|+.+ .+.+|..+++++|+.
T Consensus 225 s~~~~~~~p~~~~~~~~~~~~~~~~~g~~~~~~~~C~~~~~~~~~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~ 304 (441)
T 1y9z_A 225 SYFSNGVVPHNRLTPSGTSYAPAPINASATGALAECTVNGTSFSCGNMANKICLVERVGNQGSSYPEINSTKACKTAGAK 304 (441)
T ss_dssp ECGGGCCEECEEEEEETTEEEECCCCCEEEEEEEEEEEETTEEECCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCS
T ss_pred cccccccCcccccccCCccccccccccccccchhccccccccccCCCccccEEEEeccccCcccccHHHHHHHHHhcCCe
Confidence 33321110000 000 01111000 00122457543 5677899999999999876 678899999999999
Q ss_pred EEEEeecCCCCcc------ccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCC
Q 005334 359 GMILTNTDSYGEE------LVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPI 432 (701)
Q Consensus 359 g~i~~n~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~ 432 (701)
|+|++|+...... .....+.+|.+.++..+|+.|++|+.+. .+
T Consensus 305 gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~----~t--------------------------- 353 (441)
T 1y9z_A 305 GIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS----TT--------------------------- 353 (441)
T ss_dssp EEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE----EE---------------------------
T ss_pred EEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC----cc---------------------------
Confidence 9999987543111 1233567999999999999999886431 10
Q ss_pred CCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 005334 433 TPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYS 512 (701)
Q Consensus 433 ~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~ 512 (701)
+ +... ...|..++|||||||||||++|||+|+||+|||++||++||+||++
T Consensus 354 --------~--------~~~~-------------~~~y~~~sGTSmAaP~VAG~aALl~~~~p~~sp~~ik~~L~~TA~~ 404 (441)
T 1y9z_A 354 --------V--------SNQG-------------NQDYEYYNGTSMATPHVSGVATLVWSYHPECSASQVRAALNATADD 404 (441)
T ss_dssp --------E--------EEEE-------------EESEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSBC
T ss_pred --------c--------cccc-------------CCCceeecccccCCcccchHHHHHHHHCCCCCHHHHHHHHHhhchh
Confidence 0 0111 1379999999999999999999999999999999999999999998
Q ss_pred CCCCCcccccCCCCCCCCCCCCCccccCccccCCCCccccCChhhHHhhhhcCCC
Q 005334 513 TNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGLVYDATVQDYLDFLCALDY 567 (701)
Q Consensus 513 ~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~glv~d~~~~dy~~~lc~~~~ 567 (701)
++..+ .+.+||+|+||+.+|+ ||+.|||++++
T Consensus 405 ~~~~g------------~~~~~G~G~vn~~~A~-----------~~~~~lc~~~~ 436 (441)
T 1y9z_A 405 LSVAG------------RDNQTGYGMINAVAAK-----------AYLDESCTGPT 436 (441)
T ss_dssp CSSSS------------CBTTTBTCBCCHHHHH-----------HHHHHCTTCC-
T ss_pred hccCC------------CcccccccccCHHHHH-----------HHHHhhhcCCC
Confidence 86443 2348999999999996 49999999886
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=1.3e-55 Score=494.53 Aligned_cols=333 Identities=21% Similarity=0.254 Sum_probs=262.5
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHhhc-CCCeEEEEeCceeccCCCCCC----------cccCCC---CCCCCCCCCC
Q 005334 22 SAAMLYTYKNVIHGFSTRLTAKEAESLQK-QPGIVSVLPEVRYELHTTRTP----------EFLGLG---KSETLFPTSE 87 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~-~p~V~~V~~~~~~~~~~~~s~----------~~~gl~---~~~~~~~~~~ 87 (701)
..+++++|. .|++|+++++++++++|++ +|+|++|++++.++++.+... ..|++. ....+|..+.
T Consensus 65 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~~~~~~~~~ 143 (471)
T 3t41_A 65 SLNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNNGASYDDLP 143 (471)
T ss_dssp TCEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTTTGGGGGCC
T ss_pred CCEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCcHHHHhccC
Confidence 568889996 5999999999999999999 999999999998887543321 123332 2236899999
Q ss_pred CCCCCEEEEEccCCCCCCCCccCCCCCCCCCccc-eeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccCCCccc
Q 005334 88 VQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWK-GVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVNGASLF 166 (701)
Q Consensus 88 ~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~~~ 166 (701)
+|+||+|||||||||++||+|.++..... ..+. +..|.. .......+...+.|..||||||||||||+.
T Consensus 144 ~G~gv~VaViDtGid~~Hp~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~d~~gHGT~vAgiiaa~g------- 213 (471)
T 3t41_A 144 KHANTKIAIIDTGVMKNHDDLKNNFSTDS-KNLVPLNGFRG--TEPEETGDVHDVNDRKGHGTMVSGQTSANG------- 213 (471)
T ss_dssp SSCCCCEEEEESCCCTTCTTTTTTBCTTC-EECCCTTCGGG--CCTTCCCCTTCCCCSSSHHHHHHHHHHCBS-------
T ss_pred CCCCcEEEEEeCCCCCCChhHhcCcccCC-cccccCCCccC--CCcccCCCCCCCcCCCCccchhhheeecCC-------
Confidence 99999999999999999999997532200 0000 000000 001112223357889999999999999863
Q ss_pred ccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHHcCCeEEEEeccCCCC-------------CCccCHHHHHH
Q 005334 167 GFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIEDGVNVMSMSIGGGLT-------------DYYRDTVAIGA 233 (701)
Q Consensus 167 G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~~gvdVInlSlG~~~~-------------~~~~d~i~~a~ 233 (701)
...||||+|+|+.+|+++..++...++++||++|+++|++|||||||.... ....+.+..++
T Consensus 214 -----~~~GvAp~a~l~~~kv~~~~~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai 288 (471)
T 3t41_A 214 -----KLIGVAPNNKFTMYRVFGSKKTELLWVSKAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAI 288 (471)
T ss_dssp -----SSBCSSTTSCEEEEECCSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEEEECTTCCCSEESSCHHHHHHHHHHH
T ss_pred -----ceeEECCCCeEEEEEeccCCCCcHHHHHHHHHHHHhCCCCEEEeCCCCCCCCccccccccccccchhHHHHHHHH
Confidence 148999999999999998877899999999999999999999999997321 02235677788
Q ss_pred HHHHHCCCEEEEecCCCCCCCCc------------------cccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeec
Q 005334 234 FTAMAQGIFVSCSAGNGGPYANS------------------ISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYS 295 (701)
Q Consensus 234 ~~a~~~Gi~vV~AAGN~G~~~~~------------------~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~ 295 (701)
..+.++|++||+||||+|..... .+..+|++|+|||++
T Consensus 289 ~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~vitVgA~~------------------------ 344 (471)
T 3t41_A 289 NYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNVVTVGSTD------------------------ 344 (471)
T ss_dssp HHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTEEEEEEEC------------------------
T ss_pred HHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCeEEEEeeC------------------------
Confidence 88999999999999999976532 556778888888732
Q ss_pred CCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcccccc
Q 005334 296 RRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVAD 375 (701)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 375 (701)
T Consensus 345 -------------------------------------------------------------------------------- 344 (471)
T 3t41_A 345 -------------------------------------------------------------------------------- 344 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCc--------
Q 005334 376 AQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVN-------- 447 (701)
Q Consensus 376 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~-------- 447 (701)
..+.++.||++||+. |||+|||++
T Consensus 345 -----------------------------------------~~~~~a~fS~~G~~~-------~di~APG~~i~~~~~~g 376 (471)
T 3t41_A 345 -----------------------------------------QKSNLSEFSNFGMNY-------TDIAAPGGSFAYLNQFG 376 (471)
T ss_dssp -----------------------------------------TTSSBCTTCCBCTTT-------CCEEEECCCCHHHHHHH
T ss_pred -----------------------------------------CCCCCCCccCCCCCC-------CeEEecCCCcccccccc
Confidence 112678999999974 599999987
Q ss_pred --------------EEecccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhhCC-CCCHHHHHHHHHhcccc
Q 005334 448 --------------ILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHP-EWSPSAIKSALMTTAYS 512 (701)
Q Consensus 448 --------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-~~sp~~Ik~~L~~TA~~ 512 (701)
|+++++.+ .|..++|||||||||||++|||+|++| +|+|++||++|++||++
T Consensus 377 ~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS~AaP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~ 443 (471)
T 3t41_A 377 VDKWMNEGYMHKENILTTANNG-------------RYIYQAGTALATPKVSGALALIIDKYHLEKHPDKAIELLYQHGTS 443 (471)
T ss_dssp HHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBC
T ss_pred cccccccccccCceeEecCCCC-------------CEEeecchHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCC
Confidence 88887664 799999999999999999999999999 89999999999999997
Q ss_pred CCCCCcccccCCCCCCCCCCCCCccccCccccCCCC
Q 005334 513 TNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPG 548 (701)
Q Consensus 513 ~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~g 548 (701)
... .+...||||+||+.+|++..
T Consensus 444 ~~~-------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 444 KNN-------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp CSC-------------CCHHHHTTCBBCHHHHTTTT
T ss_pred CCC-------------CCcCccccChhCHHHHHHHH
Confidence 642 23348999999999999854
No 7
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=6e-56 Score=485.31 Aligned_cols=321 Identities=28% Similarity=0.394 Sum_probs=260.4
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceeccCCCCC-----------CcccCCCC--CCCCCCCCCC
Q 005334 22 SAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTRT-----------PEFLGLGK--SETLFPTSEV 88 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s-----------~~~~gl~~--~~~~~~~~~~ 88 (701)
..+++++|. .|++|+++++++++++|+++|+|++|++++.++++.... ...|++.. ...+|..+ +
T Consensus 23 g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i~~~~~w~~~-~ 100 (395)
T 2z2z_A 23 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVLLGKPSWLGGGSTQPAQTIPWGIERVKAPSVWSIT-D 100 (395)
T ss_dssp TCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEEECCEEEECCEECC------CCSCCCCHHHHHTTCGGGGGTC-S
T ss_pred CCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEEEeeeecccCCCCcccccccCccccCCcchhhcCHHHHHhhc-C
Confidence 568999998 599999999999999999999999999999987753221 12233322 35689888 9
Q ss_pred CCC--CEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccCCCccc
Q 005334 89 QSE--VIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVNGASLF 166 (701)
Q Consensus 89 G~g--VvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~~~ 166 (701)
|+| |+|||||||||++||+|.++. +.+ ++...+... ....++.|..||||||||||||.. ++ .
T Consensus 101 G~g~~v~VaViDtGid~~Hp~l~~~~-------~~~--~~~~~~~~~--~~~~~~~d~~gHGT~vAgiia~~~-n~---~ 165 (395)
T 2z2z_A 101 GSVSVIQVAVLDTGVDYDHPDLAANI-------AWC--VSTLRGKVS--TKLRDCADQNGHGTHVIGTIAALN-ND---I 165 (395)
T ss_dssp SCCTTCEEEEEESCBCTTCTTTGGGE-------EEE--EECGGGCCB--CCHHHHBCSSSHHHHHHHHHHCCC-SS---S
T ss_pred CCCCcEEEEEEcCCCCCCChhHhhcc-------ccC--ccccCCccc--CCCCCCCCCCCCHHHHHHHHHeec-CC---C
Confidence 999 999999999999999998751 111 111111110 001124688999999999999973 11 1
Q ss_pred ccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc--------------------CCeEEEEeccCCCCCCc
Q 005334 167 GFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED--------------------GVNVMSMSIGGGLTDYY 225 (701)
Q Consensus 167 G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~--------------------gvdVInlSlG~~~~~~~ 225 (701)
| +.||||+|+|+.+|+++..| +..+++++||+||+++ +++|||||||....
T Consensus 166 g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~~--- 237 (395)
T 2z2z_A 166 G-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPAD--- 237 (395)
T ss_dssp S-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSCC---
T ss_pred c-----eEEECCCCEEEEEEEecCCCCccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCCC---
Confidence 2 38999999999999998877 7788999999999998 99999999998532
Q ss_pred cCHHHHHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceee
Q 005334 226 RDTVAIGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVP 305 (701)
Q Consensus 226 ~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~ 305 (701)
...+..++.+|.++|++||+||||+|.....++...|++|+|||++
T Consensus 238 ~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~---------------------------------- 283 (395)
T 2z2z_A 238 DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID---------------------------------- 283 (395)
T ss_dssp CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC----------------------------------
T ss_pred CHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEec----------------------------------
Confidence 3566777778899999999999999988778888899999999842
Q ss_pred EEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEec
Q 005334 306 IVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVG 385 (701)
Q Consensus 306 l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~ 385 (701)
T Consensus 284 -------------------------------------------------------------------------------- 283 (395)
T 2z2z_A 284 -------------------------------------------------------------------------------- 283 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCc
Q 005334 386 EKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDK 465 (701)
Q Consensus 386 ~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~ 465 (701)
..+.++.||+||| +|+|||++|+++++.+
T Consensus 284 -------------------------------~~~~~a~fS~~G~----------~v~APG~~i~s~~~~~---------- 312 (395)
T 2z2z_A 284 -------------------------------SNDNIASFSNRQP----------EVSAPGVDILSTYPDD---------- 312 (395)
T ss_dssp -------------------------------TTSCBCTTSCSSC----------SEEEECSSEEEEETTT----------
T ss_pred -------------------------------CCCCCCcccCCCC----------CEEeCCCCeeeecCCC----------
Confidence 1126789999997 5799999999998764
Q ss_pred ccceeEeeccccchhhhHhHHHHHHHhhCC-------------CCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCC
Q 005334 466 RHVSFNIISGTSMSCPHVSGLAALLKAAHP-------------EWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPF 532 (701)
Q Consensus 466 ~~~~y~~~sGTSmAaP~VAG~aALl~~~~P-------------~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~ 532 (701)
.|..++|||||||||||++|||+|++| +|++.+||++|++||+++...+ .++
T Consensus 313 ---~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g------------~~~ 377 (395)
T 2z2z_A 313 ---SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG------------WDA 377 (395)
T ss_dssp ---EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS------------SBT
T ss_pred ---ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC------------CCC
Confidence 799999999999999999999999999 9999999999999999875322 235
Q ss_pred CCCccccCccccCCC
Q 005334 533 DFGAGHVDPVAALDP 547 (701)
Q Consensus 533 ~~G~G~vn~~~A~~~ 547 (701)
.||||+||+.+|++.
T Consensus 378 ~~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 378 DYGYGVVRAALAVQA 392 (395)
T ss_dssp TTBTCBCCHHHHHHH
T ss_pred CccCceeCHHHHHHH
Confidence 899999999999874
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=8.5e-52 Score=472.62 Aligned_cols=350 Identities=28% Similarity=0.323 Sum_probs=260.5
Q ss_pred cccEEEEecceeeEEEEEeCH---H-HHHHhh--cCCCeEEEEeCceeccCC----CC----------------------
Q 005334 22 SAAMLYTYKNVIHGFSTRLTA---K-EAESLQ--KQPGIVSVLPEVRYELHT----TR---------------------- 69 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~---~-~~~~L~--~~p~V~~V~~~~~~~~~~----~~---------------------- 69 (701)
..++++++. .+++++++++. + .+++|+ ++|+|++|+|+..+++.. ..
T Consensus 52 g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (671)
T 1r6v_A 52 NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALALKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEE 130 (671)
T ss_dssp TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSCCSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSST
T ss_pred CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhccCCCceEEecCeEEEeccccccCccccccccccccccccccccccc
Confidence 457888887 79999999864 3 346676 489999999997765431 00
Q ss_pred -CCcccCCCC--CCCC-CCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCC
Q 005334 70 -TPEFLGLGK--SETL-FPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDD 145 (701)
Q Consensus 70 -s~~~~gl~~--~~~~-~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~ 145 (701)
....|++.. +..+ |+. .+|+||+|||||||||++||+|.++. +.+ |+...+.. .....+..|.+
T Consensus 131 ~~~~~W~l~~I~~~~a~w~~-~tG~gV~VAVIDTGVd~~HpdL~~~~-------~~g--~~~~~~~~--~p~~~d~~d~~ 198 (671)
T 1r6v_A 131 LSNELWGLEAIGVTQQLWEE-ASGTNIIVAVVDTGVDGTHPDLEGQV-------IAG--YRPAFDEE--LPAGTDSSYGG 198 (671)
T ss_dssp TGGGCHHHHHTTCCHHHHHH-CSCTTCEEEEEESCCBTTSGGGTTTB-------CCE--EEGGGTEE--ECTTCBCCTTC
T ss_pred ccccCCchhccCCchhhhhc-cCCCCCEEEEEeCCCCCCCccccccE-------Eec--ccccCCCc--CCCCCCCccCC
Confidence 001233322 2345 877 89999999999999999999998752 222 11111100 01112345678
Q ss_pred CChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecC------CC-CChHHHHHHHHHHHHcCCeEEEEecc
Q 005334 146 GHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWL------AG-CFGSDILAGMDKAIEDGVNVMSMSIG 218 (701)
Q Consensus 146 gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~------~g-~~~~~i~~ai~~ai~~gvdVInlSlG 218 (701)
||||||||||||.. ++ .| +.||||+|+|+.+|+++. .+ .....+++||+||+++|++|||||||
T Consensus 199 gHGThVAGiIAa~~-ng---~g-----v~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG 269 (671)
T 1r6v_A 199 SAGTHVAGTIAAKK-DG---KG-----IVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWG 269 (671)
T ss_dssp SHHHHHHHHHHCCC-SS---SS-----CCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEE
T ss_pred CcchhhhhhhhccC-CC---Cc-----eEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCC
Confidence 99999999999973 11 12 489999999999999976 22 34567899999999999999999999
Q ss_pred CCCCCCccCHHHHHHHHHHHCCCEEEEecCCCCCCC-CccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCC
Q 005334 219 GGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYA-NSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRR 297 (701)
Q Consensus 219 ~~~~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~-~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~ 297 (701)
+.. +...+..++.+|.++|++||+||||+|... ..++...|++|+|||++.+.
T Consensus 270 ~~~---~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g----------------------- 323 (671)
T 1r6v_A 270 GWG---YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG----------------------- 323 (671)
T ss_dssp BSC---CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET-----------------------
T ss_pred CCC---CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC-----------------------
Confidence 843 345677888899999999999999999765 56677889999999842110
Q ss_pred CCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcccccccc
Q 005334 298 PLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQ 377 (701)
Q Consensus 298 ~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~ 377 (701)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCC
Q 005334 378 LLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVG 457 (701)
Q Consensus 378 ~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~ 457 (701)
....++.||++||.. ||+|||++|+++++....
T Consensus 324 ---------------------------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~ 356 (671)
T 1r6v_A 324 ---------------------------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDS 356 (671)
T ss_dssp ---------------------------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTS
T ss_pred ---------------------------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCc
Confidence 001478999999976 999999999999876421
Q ss_pred CCC-----CCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCC
Q 005334 458 PTG-----LESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPF 532 (701)
Q Consensus 458 ~~~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~ 532 (701)
... .........|..++|||||||||||++|||+|++|+|+|.+||++|++||+++...+ .+.
T Consensus 357 ~g~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~ 424 (671)
T 1r6v_A 357 IGYEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDH 424 (671)
T ss_dssp TTCCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBT
T ss_pred cccccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCC
Confidence 100 000112347999999999999999999999999999999999999999999875332 234
Q ss_pred CCCccccCccccCCCCccccCChhhH
Q 005334 533 DFGAGHVDPVAALDPGLVYDATVQDY 558 (701)
Q Consensus 533 ~~G~G~vn~~~A~~~glv~d~~~~dy 558 (701)
.+|||+||+.+|++..|..+....||
T Consensus 425 ~~G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 425 DTGYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp TTBTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred CcccceeCHHHHhhhhcCCCCCccce
Confidence 89999999999999888777655444
No 9
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=4.9e-54 Score=487.87 Aligned_cols=315 Identities=21% Similarity=0.260 Sum_probs=46.4
Q ss_pred HHHHHHHhhccccccccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceeccCCCCCCcccCCCCC------CC
Q 005334 8 HFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTRTPEFLGLGKS------ET 81 (701)
Q Consensus 8 h~~~~~~~l~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~s~~~~gl~~~------~~ 81 (701)
|.+++...+.+.....++++.|+++|+||+++++++++++|+++|+|++|++++.++.+. .. |++..+ ..
T Consensus 94 ~~~~l~a~~~~~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd~~v~~~~-~p---WgL~~i~~~~~~~~ 169 (692)
T 2p4e_P 94 TARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFAQS-IP---WNLERITPPRYRAD 169 (692)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEEC---------------------
T ss_pred HHHHHHHHHhhcccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEeccccccCC-CC---cchhhccccccccc
Confidence 334444433322224689999999999999999999999999999999999999876532 22 444332 23
Q ss_pred CCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccC
Q 005334 82 LFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVN 161 (701)
Q Consensus 82 ~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~ 161 (701)
.|..+.+|+||+|+|||||||++||+|.++.. |.+ |+.... .+.......+.|.+||||||||||+|+.
T Consensus 170 ~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~~--~~~~~d-~dg~~~~~~~~D~~GHGTHVAGiIAg~~-- 238 (692)
T 2p4e_P 170 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VTD--FENVPE-EDGTRFHRQASKCDSHGTHLAGVVSGRD-- 238 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ecc--cccccC-CCCCcccCCCCCCCCcHHHhhhHhhcCC--
Confidence 68788899999999999999999999997631 111 111000 0000011346789999999999999873
Q ss_pred CCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc------CCeEEEEeccCCCCCCccCHHHHHHH
Q 005334 162 GASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED------GVNVMSMSIGGGLTDYYRDTVAIGAF 234 (701)
Q Consensus 162 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~------gvdVInlSlG~~~~~~~~d~i~~a~~ 234 (701)
.||||+|+|+.+|+++..| ++.+++++||+|++++ |++|||||||+.. ...+..++.
T Consensus 239 ------------~GVAP~A~L~~vKVl~~~G~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~ 302 (692)
T 2p4e_P 239 ------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQ 302 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------CccCCCCEEEEEEeecCCCCCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHH
Confidence 7999999999999998876 7888999999999986 8999999999753 344555666
Q ss_pred HHHHCCCEEEEecCCCCCCCCc-cccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCC
Q 005334 235 TAMAQGIFVSCSAGNGGPYANS-ISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVS 313 (701)
Q Consensus 235 ~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~ 313 (701)
+|.++|++||+||||+|..... .+...|++|+|||++.+...
T Consensus 303 ~A~~~GVlvVaAAGN~G~~~~~~sPA~~~~vItVGA~d~~~~~------------------------------------- 345 (692)
T 2p4e_P 303 RLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHCCCEEEEECCCCCCCCCccCcccCCCEEEEEEEcCCCCc-------------------------------------
Confidence 8889999999999999976543 46778999999995322100
Q ss_pred CCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHH
Q 005334 314 STSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIK 393 (701)
Q Consensus 314 ~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 393 (701)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEee
Q 005334 394 NYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNII 473 (701)
Q Consensus 394 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~ 473 (701)
...-+.||++|| ||||+|||++|+++++... ..|..+
T Consensus 346 ------------------------a~~ss~fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~ 382 (692)
T 2p4e_P 346 ------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQ 382 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------------------------cccccccCCCCC--------ceeEEecCCcEEeeccCCC-----------CceEec
Confidence 000123899997 4599999999999987631 268999
Q ss_pred ccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccC
Q 005334 474 SGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYST 513 (701)
Q Consensus 474 sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~ 513 (701)
+|||||||||||++|||++++|+|+|++||++|++||.+.
T Consensus 383 SGTSmAAPhVAG~aALlls~~P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 383 SGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp ----------------------------------------
T ss_pred cchHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 9999999999999999999999999999999999999864
No 10
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=6.6e-51 Score=424.65 Aligned_cols=264 Identities=30% Similarity=0.394 Sum_probs=211.0
Q ss_pred cCCCCC--CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHH
Q 005334 74 LGLGKS--ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHT 151 (701)
Q Consensus 74 ~gl~~~--~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThv 151 (701)
|++..+ ..+|+.+..|+||+|||||||||++||+|.++.. .+ ++. .....++.|..||||||
T Consensus 13 w~l~~i~~~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~~~-------~~--~~~-------~~~~~~~~d~~gHGT~v 76 (280)
T 1dbi_A 13 YGPQNTYTDYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGKVI-------KG--YDF-------VDNDYDPMDLNNHGTHV 76 (280)
T ss_dssp CTTGGGTHHHHTTTCCCCTTCEEEEEESCCCTTSTTTTTTEE-------EE--EET-------TTTBSCCCCSSSHHHHH
T ss_pred CChhhcCcHHHHhhcCCCCCCEEEEEeCCcCCCChhhccCcc-------cc--eec-------cCCCCCCCCCCCcHHHH
Confidence 455443 4689998878899999999999999999987521 11 111 12223467899999999
Q ss_pred HHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHHH
Q 005334 152 STTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTVA 230 (701)
Q Consensus 152 AgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i~ 230 (701)
||||+|...+.. | +.||||+|+|+.+|+++..+ +..+++++||++|+++|++|||||||... ....+.
T Consensus 77 Agiia~~~~~~~---g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~g~~Vin~S~G~~~---~~~~~~ 145 (280)
T 1dbi_A 77 AGIAAAETNNAT---G-----IAGMAPNTRILAVRALDRNGSGTLSDIADAIIYAADSGAEVINLSLGCDC---HTTTLE 145 (280)
T ss_dssp HHHHHCCCSSSS---S-----CCCSSSSCEEEEEECCCTTSCCCHHHHHHHHHHHHHTTCSEEEECCSSCC---CCHHHH
T ss_pred HHHHhCcCCCCC---c-----ceEeCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHCCCCEEEeCCCCCC---CCHHHH
Confidence 999999753321 2 48999999999999998776 78889999999999999999999999853 345677
Q ss_pred HHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcC
Q 005334 231 IGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAA 310 (701)
Q Consensus 231 ~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~ 310 (701)
.++.+|.++|++||+||||+|......+...|++|+|||++
T Consensus 146 ~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~--------------------------------------- 186 (280)
T 1dbi_A 146 NAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVD--------------------------------------- 186 (280)
T ss_dssp HHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEEC---------------------------------------
T ss_pred HHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeC---------------------------------------
Confidence 78888999999999999999987777778889999999832
Q ss_pred CCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHH
Q 005334 311 NVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGD 390 (701)
Q Consensus 311 ~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~ 390 (701)
T Consensus 187 -------------------------------------------------------------------------------- 186 (280)
T 1dbi_A 187 -------------------------------------------------------------------------------- 186 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCccccee
Q 005334 391 AIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSF 470 (701)
Q Consensus 391 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y 470 (701)
..+.++.||++||.. ||+|||++|+++++.+ .|
T Consensus 187 --------------------------~~~~~~~~S~~G~~~--------dv~ApG~~i~s~~~~~-------------~~ 219 (280)
T 1dbi_A 187 --------------------------QYDRLASFSNYGTWV--------DVVAPGVDIVSTITGN-------------RY 219 (280)
T ss_dssp --------------------------TTSCBCTTBCCSTTC--------CEEEECSSEEEEETTT-------------EE
T ss_pred --------------------------CCCCcCCCCCCCCCc--------eEEEecCCeEeecCCC-------------CE
Confidence 112678899999854 9999999999998764 79
Q ss_pred EeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 471 NIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 471 ~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
..++|||||||||||++|||++ |++++.+||++|++||+++... ...||+|+||+.+|++
T Consensus 220 ~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~--------------~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 220 AYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT--------------GTYFKYGRINSYNAVT 279 (280)
T ss_dssp EEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB--------------TTTBSSEECCHHHHHT
T ss_pred EEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC--------------CCcccCCEECHHHHhc
Confidence 9999999999999999999987 8999999999999999987521 1379999999999986
No 11
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.9e-52 Score=451.26 Aligned_cols=285 Identities=20% Similarity=0.231 Sum_probs=193.1
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecc---------------cC------CccCCCCC
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEA---------------VG------PIDETAES 138 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~---------------~~------~~~~~~~~ 138 (701)
..+|..+..|++|+|||||||||++||+|.+..+.+....|...+.... .+ ......+.
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQGLKGKEKEEALEAVIPDT 100 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHTCCSHHHHHHHHHHCTTT
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCccccccccccccccccCCC
Confidence 4589999889999999999999999999998755555555654331000 00 00001122
Q ss_pred CCCCCCCCChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCC------CChHHHHHHHHHHHHcCCeE
Q 005334 139 KSPRDDDGHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAG------CFGSDILAGMDKAIEDGVNV 212 (701)
Q Consensus 139 ~~~~D~~gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g------~~~~~i~~ai~~ai~~gvdV 212 (701)
.++.|.+||||||||||||+... .+.||||+|+|+.+|++.... ....+++++|++|++.|++|
T Consensus 101 ~~~~D~~gHGThVAGiiag~~~~----------g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~a~~~g~~V 170 (357)
T 4h6x_A 101 KDRIVLNDHACHVTSTIVGQEHS----------PVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDLALELGANI 170 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTS----------SCCCSCTTSEEEEEECTTC----------CHHHHHHHHHHHHTTCSE
T ss_pred CCCcCCCCcHHHHHHHHhccCCC----------CceEeeccceEEeeeecccCCCCccccccHHHHHHHHHHHHHcCCCE
Confidence 23456789999999999997422 248999999999999975321 44567899999999999999
Q ss_pred EEEeccCCC-CCCccCHHHHHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEE
Q 005334 213 MSMSIGGGL-TDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGV 291 (701)
Q Consensus 213 InlSlG~~~-~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~ 291 (701)
||||||... .....+.+..++.++.++|++||+||||+|.....++...|++|+|||++
T Consensus 171 in~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~-------------------- 230 (357)
T 4h6x_A 171 IHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAK-------------------- 230 (357)
T ss_dssp EEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEEC--------------------
T ss_pred EeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEec--------------------
Confidence 999999754 33456778888889999999999999999988778888889999999832
Q ss_pred EeecCCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcc
Q 005334 292 SLYSRRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEE 371 (701)
Q Consensus 292 s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 371 (701)
T Consensus 231 -------------------------------------------------------------------------------- 230 (357)
T 4h6x_A 231 -------------------------------------------------------------------------------- 230 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEec
Q 005334 372 LVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAG 451 (701)
Q Consensus 372 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 451 (701)
..+.++.||+||+.. .||||+|||++|+++
T Consensus 231 ---------------------------------------------~~~~~~~fSn~G~~~-----~~~di~APG~~i~s~ 260 (357)
T 4h6x_A 231 ---------------------------------------------VDGTPCHFSNWGGNN-----TKEGILAPGEEILGA 260 (357)
T ss_dssp ---------------------------------------------TTSSBCTTCC---CT-----TTTEEEEECSSEEEC
T ss_pred ---------------------------------------------cCCcccccccCCCCC-----CccceeecCCCeEec
Confidence 122678899999754 589999999999999
Q ss_pred ccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCcccccCCCCC
Q 005334 452 WTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAA----HPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQ 527 (701)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~ 527 (701)
++.+ ..|..++|||||||||||++|||+++ +|.|+++|||++|++||++++.. .
T Consensus 261 ~~~~------------~~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~----------~ 318 (357)
T 4h6x_A 261 QPCT------------EEPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE----------V 318 (357)
T ss_dssp CTTC------------SCCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC------------------
T ss_pred cCCC------------CcccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC----------C
Confidence 8764 25778999999999999999999954 66899999999999999987532 1
Q ss_pred CCCCCCCCccccCccccCC
Q 005334 528 PSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 528 ~~~~~~~G~G~vn~~~A~~ 546 (701)
...+..||+|+||+.+|++
T Consensus 319 ~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 319 VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp ------CTTCBCCHHHHHH
T ss_pred CCCcccceeEEecHHHHHH
Confidence 2234589999999999987
No 12
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=2.2e-50 Score=417.97 Aligned_cols=255 Identities=31% Similarity=0.432 Sum_probs=214.1
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
+.+|..+++|+||+|+|||||| .+||+|+.. .+ ++. ......+.|..||||||||||+|..
T Consensus 14 ~~a~~~g~~G~gv~VaViDtGi-~~h~~l~~~---------~~--~~~-------~~~~~~~~d~~gHGT~vAgiia~~~ 74 (269)
T 1gci_A 14 PAAHNRGLTGSGVKVAVLDTGI-STHPDLNIR---------GG--ASF-------VPGEPSTQDGNGHGTHVAGTIAALN 74 (269)
T ss_dssp HHHHHTTCSCTTCEEEEEESCC-CCCTTCCEE---------EE--EEC-------STTCCSCSCSSSHHHHHHHHHHCCC
T ss_pred HHHHhcCCCCCCCEEEEECCCC-CCCHhhccc---------CC--ccc-------CCCCCCCCCCCCChHHHHHHHhcCc
Confidence 4589999999999999999999 899999421 01 111 1112236788999999999999973
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHHHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTVAIGAFTAMA 238 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i~~a~~~a~~ 238 (701)
. ..| +.|+||+|+|+.+|+++..+ +..+++++||+||++++++|||||||.... ...+..++.++.+
T Consensus 75 ~----~~~-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~ 142 (269)
T 1gci_A 75 N----SIG-----VLGVAPSAELYAVKVLGASGSGSVSSIAQGLEWAGNNGMHVANLSLGSPSP---SATLEQAVNSATS 142 (269)
T ss_dssp S----SSB-----CCCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHTTCSEEEECCCBSSC---CHHHHHHHHHHHH
T ss_pred C----CCC-----cEEeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHHCCCeEEEeCCCCCCC---CHHHHHHHHHHHH
Confidence 1 112 48999999999999998766 678899999999999999999999998542 3567777888999
Q ss_pred CCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCCcCC
Q 005334 239 QGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSSTSSG 318 (701)
Q Consensus 239 ~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (701)
+|++||+||||+|.....++...|++|+|||.+
T Consensus 143 ~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~----------------------------------------------- 175 (269)
T 1gci_A 143 RGVLVVAASGNSGAGSISYPARYANAMAVGATD----------------------------------------------- 175 (269)
T ss_dssp TTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC-----------------------------------------------
T ss_pred CCCEEEEecCCCCCCCCcCCccCCCeEEEEeec-----------------------------------------------
Confidence 999999999999988777888889999999832
Q ss_pred CccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHhHhc
Q 005334 319 NLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNYISS 398 (701)
Q Consensus 319 ~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 398 (701)
T Consensus 176 -------------------------------------------------------------------------------- 175 (269)
T 1gci_A 176 -------------------------------------------------------------------------------- 175 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccc
Q 005334 399 DPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSM 478 (701)
Q Consensus 399 ~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 478 (701)
..+.++.||++||.. ||+|||++|+++++.. .|..++||||
T Consensus 176 ------------------~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~~-------------~~~~~sGTS~ 216 (269)
T 1gci_A 176 ------------------QNNNRASFSQYGAGL--------DIVAPGVNVQSTYPGS-------------TYASLNGTSM 216 (269)
T ss_dssp ------------------TTSCBCTTCCCSTTE--------EEEEECSSEEEEETTT-------------EEEEECSHHH
T ss_pred ------------------CCCCCCCCCCCCCCc--------ceEecCCCeEeecCCC-------------CEEEcCcHHH
Confidence 112568899999865 9999999999998764 7999999999
Q ss_pred hhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 479 SCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 479 AaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
|||||||++|||+|++|+|++.+||++|++||+++. .++.||+|+||+.+|++
T Consensus 217 AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g---------------~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 217 ATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG---------------STNLYGSGLVNAEAATR 269 (269)
T ss_dssp HHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS---------------CHHHHTTCBCCHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC---------------CCCCcccCccCHHHHcC
Confidence 999999999999999999999999999999999874 12489999999999985
No 13
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=1.9e-50 Score=420.08 Aligned_cols=256 Identities=29% Similarity=0.412 Sum_probs=212.0
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|+|||||||++||+|+.. .+. +. ......+.|..||||||||||+|..
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~---------~g~--~~-------~~~~~~~~d~~gHGT~vAgiia~~~ 75 (274)
T 1r0r_E 14 DKVQAQGFKGANVKVAVLDTGIQASHPDLNVV---------GGA--SF-------VAGEAYNTDGNGHGTHVAGTVAALD 75 (274)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE---------EEE--EC-------STTCCTTCCSSSHHHHHHHHHHCCS
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHhHcCC---------CCc--cc-------cCCCCCCCCCCCCHHHHHHHHHccC
Confidence 45899999999999999999999999999421 111 11 1112235788999999999999973
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHHHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTVAIGAFTAMA 238 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i~~a~~~a~~ 238 (701)
. .. .+.||||+|+|+.+|+++..+ +..+++++||+||++++++|||||||.... ...+..++.++.+
T Consensus 76 ~----~~-----g~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~ 143 (274)
T 1r0r_E 76 N----TT-----GVLGVAPSVSLYAVKVLNSSGSGSYSGIVSGIEWATTNGMDVINMSLGGASG---STAMKQAVDNAYA 143 (274)
T ss_dssp S----SS-----BCCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSSC---CHHHHHHHHHHHH
T ss_pred C----CC-----ceEEECCCCEEEEEEEECCCCCccHHHHHHHHHHHHHcCCCEEEeCCCCCCC---cHHHHHHHHHHHH
Confidence 1 11 248999999999999998776 678899999999999999999999998542 4567778888999
Q ss_pred CCCEEEEecCCCCCCC----CccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCC
Q 005334 239 QGIFVSCSAGNGGPYA----NSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSS 314 (701)
Q Consensus 239 ~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~ 314 (701)
+|++||+||||+|... ..++...|++|+|||.+
T Consensus 144 ~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~------------------------------------------- 180 (274)
T 1r0r_E 144 RGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVD------------------------------------------- 180 (274)
T ss_dssp TTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEEC-------------------------------------------
T ss_pred CCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEec-------------------------------------------
Confidence 9999999999999763 34566778889988731
Q ss_pred CcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHH
Q 005334 315 TSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKN 394 (701)
Q Consensus 315 ~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~ 394 (701)
T Consensus 181 -------------------------------------------------------------------------------- 180 (274)
T 1r0r_E 181 -------------------------------------------------------------------------------- 180 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeec
Q 005334 395 YISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIIS 474 (701)
Q Consensus 395 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 474 (701)
..+.++.||++||. |||+|||++|+++++.+ .|..++
T Consensus 181 ----------------------~~~~~~~~S~~G~~--------~di~APG~~i~s~~~~~-------------~~~~~s 217 (274)
T 1r0r_E 181 ----------------------SNSNRASFSSVGAE--------LEVMAPGAGVYSTYPTN-------------TYATLN 217 (274)
T ss_dssp ----------------------TTSCBCTTCCCSTT--------EEEEEECSSEEEEETTT-------------EEEEEC
T ss_pred ----------------------CCCCcCccCCCCCC--------ceEEeCCCCeEeecCCC-------------CEEEec
Confidence 11266889999985 49999999999998764 799999
Q ss_pred cccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 475 GTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 475 GTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
|||||||||||++|||+|++|+|++.+||++|++||+++. +++.||+|+||+.+|++
T Consensus 218 GTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 218 GTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG---------------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp SHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS---------------CHHHHTTCBCCHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC---------------CCCCcccCccCHHHHhC
Confidence 9999999999999999999999999999999999999873 12489999999999985
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=4e-50 Score=418.95 Aligned_cols=258 Identities=31% Similarity=0.457 Sum_probs=212.8
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|||||||||++||+|+.. .+ ++... .......|..||||||||||+|..
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~~---------~g--~~~~~------~~~~~~~d~~gHGT~vAgiia~~~ 76 (281)
T 1to2_E 14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKVA---------GG--ASMVP------SETNPFQDNNSHGTHVAGTVAALN 76 (281)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCEE---------EE--EECCT------TCCCTTCCSSSHHHHHHHHHHCCS
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcCc---------CC--ccccC------CCCCCCCCCCCcHHHHHHHHhccC
Confidence 45899999999999999999999999999531 11 11110 111123688999999999999973
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHHHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTVAIGAFTAMA 238 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i~~a~~~a~~ 238 (701)
. ..| +.||||+|+|+.+|+++..+ +..++++++|+||++++++|||||||.... ...+..++.++.+
T Consensus 77 ~----~~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~---~~~~~~ai~~a~~ 144 (281)
T 1to2_E 77 N----SIG-----VLGVAPSASLYAVKVLGADGSGQYSWIINGIEWAIANNMDVINMSLGGPSG---SAALKAAVDKAVA 144 (281)
T ss_dssp S----SSS-----BCCSSTTSEEEEEECSCTTSEECHHHHHHHHHHHHHTTCSEEEECEEBSCC---CHHHHHHHHHHHH
T ss_pred C----CCc-----ceeeCCCCEEEEEEEeCCCCCccHHHHHHHHHHHHHCCCcEEEECCcCCCC---CHHHHHHHHHHHH
Confidence 1 112 48999999999999998776 678899999999999999999999998542 4567778888999
Q ss_pred CCCEEEEecCCCCCCC----CccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCC
Q 005334 239 QGIFVSCSAGNGGPYA----NSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSS 314 (701)
Q Consensus 239 ~Gi~vV~AAGN~G~~~----~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~ 314 (701)
+|++||+||||+|... ..++...|++|+|||..
T Consensus 145 ~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~------------------------------------------- 181 (281)
T 1to2_E 145 SGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVD------------------------------------------- 181 (281)
T ss_dssp TTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEEC-------------------------------------------
T ss_pred CCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEec-------------------------------------------
Confidence 9999999999999762 34566778889998731
Q ss_pred CcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHH
Q 005334 315 TSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKN 394 (701)
Q Consensus 315 ~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~ 394 (701)
T Consensus 182 -------------------------------------------------------------------------------- 181 (281)
T 1to2_E 182 -------------------------------------------------------------------------------- 181 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeec
Q 005334 395 YISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIIS 474 (701)
Q Consensus 395 ~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~s 474 (701)
..+.++.||++||.. ||+|||++|+++++.+ .|..++
T Consensus 182 ----------------------~~~~~~~fS~~G~~~--------di~APG~~i~s~~~~~-------------~~~~~s 218 (281)
T 1to2_E 182 ----------------------SSNQRASFSSVGPEL--------DVMAPGVSIQSTLPGN-------------KYGAYN 218 (281)
T ss_dssp ----------------------TTSCBCTTCCCSTTC--------CEEEECSSEEEEETTT-------------EEEEEC
T ss_pred ----------------------CCCCcCCcCCCCCCc--------eEEecCCCeEeecCCC-------------CEEecC
Confidence 112668899999854 9999999999998764 799999
Q ss_pred cccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCCC
Q 005334 475 GTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDP 547 (701)
Q Consensus 475 GTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~ 547 (701)
|||||||||||++|||+|++|+|++++||++|++||+++. +++.||||+||+.+|+++
T Consensus 219 GTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g---------------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 219 GTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG---------------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp BHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS---------------CHHHHTTCBCCHHHHTSS
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC---------------CCCCcccceecHHHHhhh
Confidence 9999999999999999999999999999999999999873 234899999999999985
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=1e-49 Score=415.70 Aligned_cols=257 Identities=27% Similarity=0.407 Sum_probs=214.2
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|+.. +|+||+|||||||||++||+|.++.. .+ ++. ......+.|..||||||||||+|..
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~~~-------~~--~~~-------~~~~~~~~d~~gHGT~vAgiia~~~ 83 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGKVV-------GG--WDF-------VDNDSTPQNGNGHGTHCAGIAAAVT 83 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTTEE-------EE--EET-------TTTBSCCCCSSSHHHHHHHHHHCCC
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhcCcc-------cc--ccc-------cCCCCCCCCCCCcHHHHHHHHhCcc
Confidence 4588876 69999999999999999999987521 11 111 1222346789999999999999975
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHHHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTVAIGAFTAMA 238 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i~~a~~~a~~ 238 (701)
.++. | +.|+||+|+|+.+|+++..+ ++..++++||++|+++|++|||||||... ..+.+..++.+|.+
T Consensus 84 ~n~~---g-----~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~---~~~~l~~ai~~a~~ 152 (279)
T 1thm_A 84 NNST---G-----IAGTAPKASILAVRVLDNSGSGTWTAVANGITYAADQGAKVISLSLGGTV---GNSGLQQAVNYAWN 152 (279)
T ss_dssp SSSS---S-----CCCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHTTCSEEEECCCBSS---CCHHHHHHHHHHHH
T ss_pred CCCC---c-----cEEeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHHCCCCEEEEecCCCC---CCHHHHHHHHHHHH
Confidence 4321 2 38999999999999998776 77889999999999999999999999853 24567778888999
Q ss_pred CCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCCcCC
Q 005334 239 QGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSSTSSG 318 (701)
Q Consensus 239 ~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (701)
+|++||+||||+|.....++...|++|+|||++
T Consensus 153 ~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~----------------------------------------------- 185 (279)
T 1thm_A 153 KGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTD----------------------------------------------- 185 (279)
T ss_dssp TTCEEEEECCSSSSCCCCBTTTSTTEEEEEEEC-----------------------------------------------
T ss_pred CCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeC-----------------------------------------------
Confidence 999999999999987777888889999999832
Q ss_pred CccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHhHhc
Q 005334 319 NLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNYISS 398 (701)
Q Consensus 319 ~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~ 398 (701)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 1thm_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccc
Q 005334 399 DPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSM 478 (701)
Q Consensus 399 ~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSm 478 (701)
..+.++.||++||.. ||+|||++|+++++.. .|..++||||
T Consensus 186 ------------------~~~~~~~fS~~G~~~--------dv~APG~~i~s~~~~~-------------~~~~~sGTS~ 226 (279)
T 1thm_A 186 ------------------QNDNKSSFSTYGSWV--------DVAAPGSSIYSTYPTS-------------TYASLSGTSM 226 (279)
T ss_dssp ------------------TTSCBCTTCCCCTTC--------CEEEECSSEEEEETTT-------------EEEEECSHHH
T ss_pred ------------------CCCCcCCcCCCCCce--------EEEEcCCCeEEEeCCC-------------CEEEcccHHH
Confidence 112567899999864 9999999999998764 7999999999
Q ss_pred hhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 479 SCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 479 AaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
|||||||++||| ++|.+++++||++|++||+++...+ ..||+|+||+.+|++
T Consensus 227 AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~--------------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 227 ATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG--------------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp HHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------------TTBSSEECCHHHHHH
T ss_pred HHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------------ccccCCeeCHHHHhc
Confidence 999999999999 5799999999999999999875321 279999999999975
No 16
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=2.7e-50 Score=421.27 Aligned_cols=264 Identities=22% Similarity=0.274 Sum_probs=208.7
Q ss_pred CCCC-CCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccCCCc
Q 005334 86 SEVQ-SEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVNGAS 164 (701)
Q Consensus 86 ~~~G-~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~~~~ 164 (701)
..+| +||+|||||||||++||+|.++... +. .. ..........|.+||||||||||+|+...
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~~~~-------~~--~~-----~~~~~~~~d~~~~gHGT~VAGiiag~~~~--- 65 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGADLT-------VL--PT-----LAPTAARSDGFMSAHGTHVASIIFGQPET--- 65 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTCEEE-------EC--CC-----SSCCCCCTTCHHHHHHHHHHHHHHCCTTS---
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCCeee-------cC--cC-----CCCCCCCCCCCCCCcccceeehhhccCCc---
Confidence 3578 6999999999999999999875211 11 00 00111122334578999999999987422
Q ss_pred ccccCCCceeeecCCCeEEEEEeecCCC--CChHHHHHHHHHHHHcCCeEEEEeccCCC-CCCccCHHHHHHHHHHHCCC
Q 005334 165 LFGFASGTARGMAAQARVATYKVCWLAG--CFGSDILAGMDKAIEDGVNVMSMSIGGGL-TDYYRDTVAIGAFTAMAQGI 241 (701)
Q Consensus 165 ~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~ai~~gvdVInlSlG~~~-~~~~~d~i~~a~~~a~~~Gi 241 (701)
.+.||||+|+|+.+|++.+.+ ....+++++|+||++++++|||||||... .......+..++..+.++|+
T Consensus 66 -------~~~GvAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi 138 (282)
T 3zxy_A 66 -------SVPGIAPQCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAHIINISGGELTDFGEADGWLENAVSLCRQNNV 138 (282)
T ss_dssp -------SSCCSSTTSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTC
T ss_pred -------eeeeeccccceEeeEeeccccccchHHHHHHHHHHhhccCCeEEeccCccccccccccHHHHHHHHHHhhcCc
Confidence 248999999999999986543 67788999999999999999999999754 22334567777888999999
Q ss_pred EEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCCcCCCcc
Q 005334 242 FVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSSTSSGNLC 321 (701)
Q Consensus 242 ~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C 321 (701)
++|+||||+|......+...|++|+|||.+
T Consensus 139 ~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~-------------------------------------------------- 168 (282)
T 3zxy_A 139 LLVAAAGNNGCDCLHVPAALPAVLAVGAMD-------------------------------------------------- 168 (282)
T ss_dssp EEEEECCSSCSSCEEETTTSTTCEEEEEEC--------------------------------------------------
T ss_pred eEEEecccCCCccccCccccceeEEEEEEc--------------------------------------------------
Confidence 999999999988878888899999999832
Q ss_pred CCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHhHhcCCC
Q 005334 322 MTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNYISSDPG 401 (701)
Q Consensus 322 ~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~ 401 (701)
T Consensus 169 -------------------------------------------------------------------------------- 168 (282)
T 3zxy_A 169 -------------------------------------------------------------------------------- 168 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccccchhh
Q 005334 402 PMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCP 481 (701)
Q Consensus 402 ~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP 481 (701)
..+.++.||+||+.. .||||+|||++|+++++.+ .|..++|||||||
T Consensus 169 ---------------~~~~~~~~S~~~~~~-----~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP 215 (282)
T 3zxy_A 169 ---------------DHGHPLDFSNWGSTY-----EQQGILAPGEDILGAKPGG-------------GTERLSGTAFATP 215 (282)
T ss_dssp ---------------TTSCBCSSSCCCHHH-----HHHEEEEECSSEEEECTTS-------------CEEEECSHHHHHH
T ss_pred ---------------CCCccccccCCCCCc-----cccceeccCcceeeecCCC-------------ceeecCCCcccch
Confidence 112567889998753 5889999999999998764 7999999999999
Q ss_pred hHhHHHHHHHhhC----CCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 482 HVSGLAALLKAAH----PEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 482 ~VAG~aALl~~~~----P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
||||++|||++++ |.++|++||++|++||++++.. .+.....+|+|+||+.+|++
T Consensus 216 ~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~----------~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 216 IVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD----------APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC-----------------CGGGTTCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC----------CCCccCceeeeEeCHHHHHH
Confidence 9999999999874 7899999999999999977532 22334589999999999986
No 17
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=4.2e-50 Score=427.61 Aligned_cols=264 Identities=24% Similarity=0.326 Sum_probs=210.3
Q ss_pred CCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhccc
Q 005334 79 SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGS 158 (701)
Q Consensus 79 ~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~ 158 (701)
+..+|..+++|+||+|||||||||++||+|.++.. .+..+.... ........|..||||||||||+|+
T Consensus 30 ~~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~~~-------~~~~~~~~~-----~~~~~~~~d~~gHGT~VAgiia~~ 97 (327)
T 2x8j_A 30 APAVWRASAKGAGQIIGVIDTGCQVDHPDLAERII-------GGVNLTTDY-----GGDETNFSDNNGHGTHVAGTVAAA 97 (327)
T ss_dssp HHHHHHHHGGGTTCEEEEEESCCCTTCTTTGGGEE-------EEEECSSGG-----GGCTTCCCCSSSHHHHHHHHHHCC
T ss_pred hHHHHhcCCCCCCCEEEEEcCCCCCCChhHhhccc-------CCccccCCC-----CCCCCCCCCCCCchHHHHHHHhcc
Confidence 35689999999999999999999999999987521 111111110 011223578899999999999997
Q ss_pred ccCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHH------cCCeEEEEeccCCCCCCccCHHHH
Q 005334 159 VVNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIE------DGVNVMSMSIGGGLTDYYRDTVAI 231 (701)
Q Consensus 159 ~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~------~gvdVInlSlG~~~~~~~~d~i~~ 231 (701)
.. + .| +.||||+|+|+.+|+++..+ +..+++++||+||++ .+++|||||||... ....+..
T Consensus 98 ~~-~---~g-----~~GvAp~a~l~~~kv~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ 165 (327)
T 2x8j_A 98 ET-G---SG-----VVGVAPKADLFIIKALSGDGSGEMGWIAKAIRYAVDWRGPKGEQMRIITMSLGGPT---DSEELHD 165 (327)
T ss_dssp CC-S---SB-----CCCSSTTCEEEEEECSCTTSEECHHHHHHHHHHHHHCCCTTSCCCSEEEECEEBSC---CCHHHHH
T ss_pred CC-C---CC-----cEeeCCCCEEEEEEeECCCCCcCHHHHHHHHHHHHhhcccccCCceEEEECCCcCC---CCHHHHH
Confidence 31 1 12 48999999999999998776 778899999999999 89999999999853 2456777
Q ss_pred HHHHHHHCCCEEEEecCCCCCCC-----CccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeE
Q 005334 232 GAFTAMAQGIFVSCSAGNGGPYA-----NSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPI 306 (701)
Q Consensus 232 a~~~a~~~Gi~vV~AAGN~G~~~-----~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l 306 (701)
++.+|.++|++||+||||+|... ...+...|++|+|||++
T Consensus 166 ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~----------------------------------- 210 (327)
T 2x8j_A 166 AVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVD----------------------------------- 210 (327)
T ss_dssp HHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEEC-----------------------------------
T ss_pred HHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEEC-----------------------------------
Confidence 88889999999999999999752 35566788999999842
Q ss_pred EEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEech
Q 005334 307 VDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGE 386 (701)
Q Consensus 307 ~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~ 386 (701)
T Consensus 211 -------------------------------------------------------------------------------- 210 (327)
T 2x8j_A 211 -------------------------------------------------------------------------------- 210 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcc
Q 005334 387 KAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKR 466 (701)
Q Consensus 387 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 466 (701)
..+.++.||++||. |||+|||++|+++++.+
T Consensus 211 ------------------------------~~~~~~~fS~~G~~--------~di~APG~~i~s~~~~~----------- 241 (327)
T 2x8j_A 211 ------------------------------FDLRLSDFTNTNEE--------IDIVAPGVGIKSTYLDS----------- 241 (327)
T ss_dssp ------------------------------TTCCBSCC---CCC--------CSEEEECSSEEEECSTT-----------
T ss_pred ------------------------------CCCCCCCccCCCCC--------ceEecCcCceEeecCCC-----------
Confidence 11267889999984 59999999999998764
Q ss_pred cceeEeeccccchhhhHhHHHHHHHhh-----CCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCc
Q 005334 467 HVSFNIISGTSMSCPHVSGLAALLKAA-----HPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDP 541 (701)
Q Consensus 467 ~~~y~~~sGTSmAaP~VAG~aALl~~~-----~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~ 541 (701)
.|..++|||||||||||++|||+|+ +|.|++.+||++|++||+++.. +++.+|+|+||+
T Consensus 242 --~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~tA~~~g~--------------~~~~~G~G~vd~ 305 (327)
T 2x8j_A 242 --GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRRATPIGF--------------TAQAEGNGFLTL 305 (327)
T ss_dssp --CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTTEECCSS--------------CHHHHTTCEECT
T ss_pred --CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHhCccCCC--------------CCCceeeeEECH
Confidence 7999999999999999999999999 9999999999999999998741 234899999999
Q ss_pred cccCC
Q 005334 542 VAALD 546 (701)
Q Consensus 542 ~~A~~ 546 (701)
.+|++
T Consensus 306 ~~A~~ 310 (327)
T 2x8j_A 306 DLVER 310 (327)
T ss_dssp THHHH
T ss_pred HHHHH
Confidence 99998
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=1.4e-48 Score=413.97 Aligned_cols=283 Identities=27% Similarity=0.349 Sum_probs=220.1
Q ss_pred CCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhccc
Q 005334 79 SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGS 158 (701)
Q Consensus 79 ~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~ 158 (701)
+..+|..+.+|+||+|||||||||++||+|.++.. . +++.... .........|..||||||||||+|.
T Consensus 15 ~~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~~~-------~--~~~~~~~---~~~~~~~~~d~~gHGT~vAgiia~~ 82 (310)
T 2ixt_A 15 NNDTLTSTTGGSGINIAVLDTGVNTSHPDLVNNVE-------Q--CKDFTGA---TTPINNSCTDRNGHGTHVAGTALAD 82 (310)
T ss_dssp TCTTCCCCCCCTTCEEEEEESCCCTTCTTTTTTEE-------E--EEESSSS---SSCEETCCCCSSSHHHHHHHHHHCB
T ss_pred chhhhhccCCCCCcEEEEEecCCCCCCHHHhhccc-------c--cccccCC---CCCCCCCCCCCCCCHHHHHHHHhcc
Confidence 46799999999999999999999999999987521 1 1111111 0011123578899999999999998
Q ss_pred ccCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCC-----eEEEEeccCCCCCCccCHHHHH
Q 005334 159 VVNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGV-----NVMSMSIGGGLTDYYRDTVAIG 232 (701)
Q Consensus 159 ~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gv-----dVInlSlG~~~~~~~~d~i~~a 232 (701)
...+ ...+.||||+|+|+.+|+++..+ +..+++++||+||+++++ +|||||||.... ...+..+
T Consensus 83 ~~~n-------~~g~~GvAp~a~l~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~Vin~S~G~~~~---~~~~~~a 152 (310)
T 2ixt_A 83 GGSD-------QAGIYGVAPDADLWAYKVLLDSGSGYSDDIAAAIRHAADQATATGTKTIISMSLGSSAN---NSLISSA 152 (310)
T ss_dssp CCTT-------SCSCBCSCTTSEEEEEECSCTTSCCCHHHHHHHHHHHHHHHHHHTCCEEEEECCCBSSC---CHHHHHH
T ss_pred CCCC-------CCceEEECCCCEEEEEEEEcCCCCCcHHHHHHHHHHHHHhhhccCCCeEEEEcCCCCCC---CHHHHHH
Confidence 5221 12248999999999999998776 678899999999999988 999999998542 4567777
Q ss_pred HHHHHHCCCEEEEecCCCCCC--CCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcC
Q 005334 233 AFTAMAQGIFVSCSAGNGGPY--ANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAA 310 (701)
Q Consensus 233 ~~~a~~~Gi~vV~AAGN~G~~--~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~ 310 (701)
+.++.++|++||+||||+|.. ....+...|++|+|||.+....
T Consensus 153 i~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~~----------------------------------- 197 (310)
T 2ixt_A 153 VNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQQ----------------------------------- 197 (310)
T ss_dssp HHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEEE-----------------------------------
T ss_pred HHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEecccccc-----------------------------------
Confidence 788999999999999999976 3456677899999998421000
Q ss_pred CCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHH
Q 005334 311 NVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGD 390 (701)
Q Consensus 311 ~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~ 390 (701)
T Consensus 198 -------------------------------------------------------------------------------- 197 (310)
T 2ixt_A 198 -------------------------------------------------------------------------------- 197 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCC----CCCCCCcEEecCCcEEecccCCCCCCCCCCCcc
Q 005334 391 AIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPIT----PEILKPDLIAPGVNILAGWTGAVGPTGLESDKR 466 (701)
Q Consensus 391 ~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~----~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 466 (701)
.....++.||++||.... ..+.||||+|||++|+++++.+
T Consensus 198 -------------------------~g~~~~~~~S~~G~~~~~g~~~~~~~~~di~ApG~~i~s~~~~~----------- 241 (310)
T 2ixt_A 198 -------------------------NGTYRVADYSSRGYISTAGDYVIQEGDIEISAPGSSVYSTWYNG----------- 241 (310)
T ss_dssp -------------------------TTEEEECTTSCCCCTTTTTSSSCCTTCCCEEEECSSEEEECTTS-----------
T ss_pred -------------------------CCCeeeccccCCCCccCCccccccCCCeeEECCCCCEeeecCCC-----------
Confidence 000156789999995421 1345999999999999998754
Q ss_pred cceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCc
Q 005334 467 HVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDP 541 (701)
Q Consensus 467 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~ 541 (701)
.|..++|||||||||||++|||+|++|+|++.+||++|++||++.+..+. ....+..++.+|||++|+
T Consensus 242 --~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 242 --GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKSVDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp --SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTSCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred --CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccCCCCC-----cccccCCccccccceeec
Confidence 79999999999999999999999999999999999999999998864321 112455667999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=6.1e-49 Score=418.02 Aligned_cols=265 Identities=30% Similarity=0.415 Sum_probs=214.8
Q ss_pred CCCCCCCCCCCC--CCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhc
Q 005334 79 SETLFPTSEVQS--EVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAA 156 (701)
Q Consensus 79 ~~~~~~~~~~G~--gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaA 156 (701)
+..+|..+ +|+ ||+|||||||||++||+|.++. +.+ ++...+.. ........|..||||||||||+
T Consensus 17 ~~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~~-------~~~--~~~~~~~~--~~~~~~~~d~~gHGT~vAgiia 84 (320)
T 2z30_A 17 APSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAANI-------AWC--VSTLRGKV--STKLRDCADQNGHGTHVIGTIA 84 (320)
T ss_dssp CGGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGGE-------EEE--EECGGGCC--BCCHHHHBCSSSHHHHHHHHHH
T ss_pred hHHHHHhc-CCCcCCeEEEEECCCCCCCChhHhccc-------ccC--ccccCCcc--CCCCCCCCCCCCCHHHHHHHHH
Confidence 35689988 899 9999999999999999998751 111 11111100 0011123678999999999999
Q ss_pred ccccCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc--------------------CCeEEEE
Q 005334 157 GSVVNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED--------------------GVNVMSM 215 (701)
Q Consensus 157 G~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~--------------------gvdVInl 215 (701)
|.. ++ .| +.||||+|+|+.+|+++..| +..++++++|+||+++ +++||||
T Consensus 85 ~~~-n~---~g-----~~GvAp~a~l~~~~v~~~~g~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~ 155 (320)
T 2z30_A 85 ALN-ND---IG-----VVGVAPGVQIYSVRVLDARGSGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISM 155 (320)
T ss_dssp CCS-SS---BS-----CCCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHTTTTCSCTTSSSCCTTCTTSCCCSEEEE
T ss_pred ccc-CC---Cc-----eEeeCCCCEEEEEEeeCCCCCccHHHHHHHHHHHHhCcccccccccccccccccccCCceEEEe
Confidence 972 11 12 38999999999999998776 7788999999999987 9999999
Q ss_pred eccCCCCCCccCHHHHHHHHHHHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeec
Q 005334 216 SIGGGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYS 295 (701)
Q Consensus 216 SlG~~~~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~ 295 (701)
|||.... ...+..++.+|.++|++||+||||+|.....++...|++|+|||.+
T Consensus 156 S~G~~~~---~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~------------------------ 208 (320)
T 2z30_A 156 SLGGPAD---DSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAID------------------------ 208 (320)
T ss_dssp CEEBSCC---CHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEEC------------------------
T ss_pred cCCCCCC---CHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEeeC------------------------
Confidence 9998542 4556777778999999999999999988777888899999999832
Q ss_pred CCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcccccc
Q 005334 296 RRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVAD 375 (701)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~ 375 (701)
T Consensus 209 -------------------------------------------------------------------------------- 208 (320)
T 2z30_A 209 -------------------------------------------------------------------------------- 208 (320)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCC
Q 005334 376 AQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGA 455 (701)
Q Consensus 376 ~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 455 (701)
..+.++.||++|| +|+|||++|+++++..
T Consensus 209 -----------------------------------------~~~~~~~~S~~g~----------~v~APG~~i~s~~~~~ 237 (320)
T 2z30_A 209 -----------------------------------------SNDNIASFSNRQP----------EVSAPGVDILSTYPDD 237 (320)
T ss_dssp -----------------------------------------TTSCBCTTSCSSC----------SEEEECSSEEEEETTT
T ss_pred -----------------------------------------CCCCcCcccCCCC----------CEEeCCCCeEEeccCC
Confidence 1126678999986 7899999999998764
Q ss_pred CCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhhC-------------CCCCHHHHHHHHHhccccCCCCCccccc
Q 005334 456 VGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAH-------------PEWSPSAIKSALMTTAYSTNGNGKTLLD 522 (701)
Q Consensus 456 ~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~-------------P~~sp~~Ik~~L~~TA~~~~~~g~~~~~ 522 (701)
.|..++|||||||||||++|||+|++ |+|++.+||++|++||+++...+
T Consensus 238 -------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~~~p~lt~~~v~~~L~~ta~~~~~~g----- 299 (320)
T 2z30_A 238 -------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG----- 299 (320)
T ss_dssp -------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSTTSHHHHHHHHSBCCSSSS-----
T ss_pred -------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccccccCCCCCHHHHHHHHHhhCccCCCCC-----
Confidence 79999999999999999999999999 99999999999999999874322
Q ss_pred CCCCCCCCCCCCCccccCccccCCC
Q 005334 523 ISTGQPSTPFDFGAGHVDPVAALDP 547 (701)
Q Consensus 523 ~~~~~~~~~~~~G~G~vn~~~A~~~ 547 (701)
....+|||+||+.+|++.
T Consensus 300 -------~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 300 -------WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp -------SBTTTBTCBCCHHHHHHH
T ss_pred -------CCCCcCCceeCHHHHHHH
Confidence 234899999999999873
No 20
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=3.6e-48 Score=459.96 Aligned_cols=406 Identities=19% Similarity=0.193 Sum_probs=265.4
Q ss_pred CCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEec-ccCCccCCCC---CCCCCCCCCChhHHHHhhcccccCCCccc
Q 005334 91 EVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEE-AVGPIDETAE---SKSPRDDDGHGTHTSTTAAGSVVNGASLF 166 (701)
Q Consensus 91 gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~---~~~~~D~~gHGThvAgiaAG~~~~~~~~~ 166 (701)
+|+|||||||++++|++.....-......|. ++.. .....+..++ .....|.+||||||||||||.. ++
T Consensus 214 ~V~VAVIDTG~d~DL~d~~~l~~Y~~~~dyg--~F~D~v~~~~n~~Ddgd~~~~v~D~~GHGThVAGIIAa~~-N~---- 286 (1354)
T 3lxu_X 214 DGWLTIVDTTEQGDLDQALRIGEYSRTHETR--NVDDFLSISVNVHDEGNVLEVVGMSSPHGTHVSSIASGNH-SS---- 286 (1354)
T ss_dssp SSCEEEECSSSSCCSSCSEEEECTTTTCCCC--EESSSCEEEEEEEGGGTEEEEEECCCHHHHHHHHHHCCCC-SS----
T ss_pred CEEEEEEeCCCCCCccccccccccccccccc--ccccccCCCCccCCCCCccccCCCCCCcHHHHHHHHhcCC-CC----
Confidence 6999999999988776643110000000110 0000 0000010111 1112478899999999999985 22
Q ss_pred ccCCCceeeecCCCeEEEEEeecCCC---CChHHHHHHHHHHHH-----cCCeEEEEeccCCCCCCccCHHHHHHHHHH-
Q 005334 167 GFASGTARGMAAQARVATYKVCWLAG---CFGSDILAGMDKAIE-----DGVNVMSMSIGGGLTDYYRDTVAIGAFTAM- 237 (701)
Q Consensus 167 G~~~g~~~GvAP~A~l~~~kv~~~~g---~~~~~i~~ai~~ai~-----~gvdVInlSlG~~~~~~~~d~i~~a~~~a~- 237 (701)
..+.||||+|+|+.+|+++..+ ....+++++|.+|++ .|++|||||||........+.+..++.+|.
T Consensus 287 ----~g~~GVAP~AkI~~vKVld~~~g~~~t~s~l~~AI~~Aid~a~~~~gadVINmS~G~~~~~~~~~~l~~aI~~A~~ 362 (1354)
T 3lxu_X 287 ----RDVDGVAPNAKIVSMTIGDGRLGSMETGTALVRAMTKVMELCRDGRRIDVINMSYGEHANWSNSGRIGELMNEVVN 362 (1354)
T ss_dssp ----SSSCCSCTTCEEEEEECBCTTTSSCBCHHHHHHHHHHHHHHHHTTCCCCEEEECCCCCCSCSSCCHHHHHHHHHHH
T ss_pred ----CCceeecCCCEEEEEEeccCCCCcccChHHHHHHHHHHHHHHhhcCCceEEEcCCccCCCCCccHHHHHHHHHHHH
Confidence 2248999999999999997653 355778888888887 799999999999764344567777777776
Q ss_pred HCCCEEEEecCCCCCCCCc--ccc--CCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCC
Q 005334 238 AQGIFVSCSAGNGGPYANS--ISN--VAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVS 313 (701)
Q Consensus 238 ~~Gi~vV~AAGN~G~~~~~--~~~--~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~ 313 (701)
++|++||+||||+|+...+ .+. .++++|+|||++..........
T Consensus 363 ~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~ys-------------------------------- 410 (1354)
T 3lxu_X 363 KYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAEYA-------------------------------- 410 (1354)
T ss_dssp TSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC-----------------------------------
T ss_pred hCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccccc--------------------------------
Confidence 8999999999999986544 344 3799999999643221100000
Q ss_pred CCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHH
Q 005334 314 STSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIK 393 (701)
Q Consensus 314 ~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 393 (701)
T Consensus 411 -------------------------------------------------------------------------------- 410 (1354)
T 3lxu_X 411 -------------------------------------------------------------------------------- 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEee
Q 005334 394 NYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNII 473 (701)
Q Consensus 394 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~ 473 (701)
......+.++.|||+||+. ++++||||+|||++|+++..... ..|..+
T Consensus 411 -------------------~~~~~~g~~asFSS~GPt~--dg~~KpDIaAPG~~I~St~~~~~-----------~~y~~~ 458 (1354)
T 3lxu_X 411 -------------------MREKLPGNVYTWTSRDPCI--DGGQGVTVCAPGGAIASVPQFTM-----------SKSQLM 458 (1354)
T ss_dssp --------------------------CCCCCCCCSCCS--SSSCCEEEEEEC--------------------------CC
T ss_pred -------------------cccCCCCccccccCCCCCc--cCCCcceEEecCceEEEeecCCC-----------CceecC
Confidence 0001124789999999997 68999999999999999755321 278899
Q ss_pred ccccchhhhHhHHHHHHHh----hCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCCCCc
Q 005334 474 SGTSMSCPHVSGLAALLKA----AHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALDPGL 549 (701)
Q Consensus 474 sGTSmAaP~VAG~aALl~~----~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~~gl 549 (701)
+|||||||||||++|||++ .+|+|++.+||++|++||++.+. .+++.||+|+||+.+|++..+
T Consensus 459 SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~-------------~~~~~~G~GlLDa~~AV~~a~ 525 (1354)
T 3lxu_X 459 NGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY-------------VDPFAQGHGLLNVEKAFEHLT 525 (1354)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-------------SCTTTSSSSBCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-------------CCcccccCCEeCHHHHHHHHH
Confidence 9999999999999999986 79999999999999999998752 234589999999999999999
Q ss_pred cccCChhhHHhhhhcCCCCc-ceEEEeecccccccCCCCCCCCCCCCCceEeeccCCCCCcCCcCcceeEEEEEEEeeCC
Q 005334 550 VYDATVQDYLDFLCALDYSS-FQIKQATNRDFACLSSKTYSLGDVNYPSFSVPFETASGTWGGVGATSTVKYTRTLTNVG 628 (701)
Q Consensus 550 v~d~~~~dy~~~lc~~~~~~-~~~~~~~~~~~~c~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~~~~~~~~~~rtvtnv~ 628 (701)
.|+..+.+|+.|+|..++.. ..|- .+.. .| ++.. . .+++|+-+..|..
T Consensus 526 ~~~~~p~~~v~f~~~v~~~~~rgIy--lR~~-~~-------------~~~~------~---------~tv~V~p~f~~~~ 574 (1354)
T 3lxu_X 526 EHRQSKDNMLRFSVRVGNNADKGIH--LRQG-VQ-------------RNSI------D---------YNVYIEPIFYNDK 574 (1354)
T ss_dssp TTTTCGGGGEEEEEEETTTTBSSEE--ECSS-CC-------------CSCE------E---------EEEEEEEEESSCS
T ss_pred hcCCCCccceEEEEEecCCCCCceE--Eecc-cc-------------CCce------E---------EEEEEeeeecCcc
Confidence 99999999999999987532 2221 0000 00 0000 0 2333333442221
Q ss_pred ---CC-Ce-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCCCCeEEEEEEEEc-----CCeEEEeeEEE
Q 005334 629 ---TP-TT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPSGTTSFARLQWSD-----GKHVVGSPIAF 698 (701)
Q Consensus 629 ---~~-~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~~-----~~~~v~~P~~v 698 (701)
.. .. |...+...+..--|.+ |+.|.+ .++.++|.|.++.+.. .....+++|..-| .....|+||.|
T Consensus 575 ~~~~~~~i~f~~~l~L~~t~~wv~~-p~~l~l--~~~~r~~~v~vDp~~L-~~G~h~~~v~~~D~~~~~~gp~f~ipvTv 650 (1354)
T 3lxu_X 575 EADPKDKFNFNVRLNLIASQPWVQC-GAFLDL--SYGTRSIAVRVDPTGL-QPGVHSAVIRAYDTDCVQKGSLFEIPVTV 650 (1354)
T ss_dssp CSSSTTCSCCCCEEEEEESSTTEEE-CSCEEC--TTSCEEEEEEECGGGC-CSEEEEEEEEEEESSCTTSCCSEEEEEEE
T ss_pred cCChhhccceEEEEEEecCCCceec-ccceee--cCCCceEEEEECCCCC-CCcceeEEEEEEEcCCcccCceEEeeEEE
Confidence 11 11 4443331121222332 777777 5789999999998844 4467899998875 36899999987
Q ss_pred E
Q 005334 699 S 699 (701)
Q Consensus 699 ~ 699 (701)
.
T Consensus 651 ~ 651 (1354)
T 3lxu_X 651 V 651 (1354)
T ss_dssp E
T ss_pred E
Confidence 5
No 21
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=1.2e-49 Score=421.43 Aligned_cols=270 Identities=22% Similarity=0.267 Sum_probs=214.9
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
+.+|+.+..++||+|||||||||++||+|.++.+. +.. .. ...+.....|..||||||||||+|+.
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~~~~-------~~~-~~------~~~~~~~~~d~~gHGThVAGiiag~~ 76 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGADLT-------RLP-SL------VSGEANANGSMSTHGTHVASIIFGQH 76 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTCEEE-------ECC-----------------CCCCHHHHHHHHHHHCCT
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCCccc-------CCC-cc------cCCCCCCCCCCCCchHHHHHHHHccc
Confidence 45899887779999999999999999999875321 100 00 00111234567899999999999874
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC--CChHHHHHHHHHHHHcCCeEEEEeccCCC-CCCccCHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG--CFGSDILAGMDKAIEDGVNVMSMSIGGGL-TDYYRDTVAIGAFTA 236 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g--~~~~~i~~ai~~ai~~gvdVInlSlG~~~-~~~~~d~i~~a~~~a 236 (701)
.. .+.||||+|+|+.+|++.+.+ ....++++||+||++++++|||+|||... .......+..++..+
T Consensus 77 ~~----------~~~GVAp~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~g~~vi~~s~g~~~~~~~~~~~~~~ai~~a 146 (306)
T 4h6w_A 77 DS----------PVTGIAPQCRGLIVPVFADESLKLSQLDLSRAIEQAVNNGANIINVSAGQLTDAGEADTWLEKAIQLC 146 (306)
T ss_dssp TS----------SSCCSSTTSEEEECCCCCSSSCCCCHHHHHHHHHHHHHTTCSEEEECCCEEESSSCCCHHHHHHHHHH
T ss_pred cC----------CcceeccccccceeeccccccccchHHHHHHHHHHhhcccceeeeccccccccCCCccHHHHHHHHHH
Confidence 21 248999999999999986543 67788999999999999999999999643 233455677788899
Q ss_pred HHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCCc
Q 005334 237 MAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSSTS 316 (701)
Q Consensus 237 ~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~ 316 (701)
.++|++||++|||+|......+...+++|+|||+.
T Consensus 147 ~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~--------------------------------------------- 181 (306)
T 4h6w_A 147 QENNVLLIAATGNDGCECLHVPASLPTVLAVGAMD--------------------------------------------- 181 (306)
T ss_dssp HHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEEC---------------------------------------------
T ss_pred HHcCCeEEEecCCCCcccccccccCCcceEEEEec---------------------------------------------
Confidence 99999999999999988777778889999999832
Q ss_pred CCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHhH
Q 005334 317 SGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNYI 396 (701)
Q Consensus 317 ~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~ 396 (701)
T Consensus 182 -------------------------------------------------------------------------------- 181 (306)
T 4h6w_A 182 -------------------------------------------------------------------------------- 181 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeeccc
Q 005334 397 SSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISGT 476 (701)
Q Consensus 397 ~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGT 476 (701)
..+.++.||++|+.. .||||+|||++|+++++.+ .|..++||
T Consensus 182 --------------------~~~~~~~~s~~g~~~-----~~~di~APG~~i~s~~~~~-------------~~~~~sGT 223 (306)
T 4h6w_A 182 --------------------DQGKPVDFSNWGDAY-----QKQGILAPGKDILGAKPNG-------------GTIRLSGT 223 (306)
T ss_dssp --------------------TTSCBCSSSCBCHHH-----HHHEEEEECSSEEEECTTS-------------CEEEECSH
T ss_pred --------------------CCCCccccccccCCc-----CcceeecCCcCcccccCCC-------------ceeccCCC
Confidence 112567788888653 5889999999999998764 79999999
Q ss_pred cchhhhHhHHHHHHHhh----CCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccccCC
Q 005334 477 SMSCPHVSGLAALLKAA----HPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAALD 546 (701)
Q Consensus 477 SmAaP~VAG~aALl~~~----~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A~~ 546 (701)
|||||||||++|||+++ +|.|+|++||++|++||++++..+. .....||+|+||+.+|++
T Consensus 224 S~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~~----------~~~~~~G~G~ln~~~Av~ 287 (306)
T 4h6w_A 224 SFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKDT----------DDQSRCLMGKLNILDAIE 287 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTTC----------SCGGGGTTCBCCHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCCC----------CCCCCcceeecCHHHHHH
Confidence 99999999999999864 6999999999999999998754321 123479999999999997
No 22
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=5.1e-49 Score=423.80 Aligned_cols=271 Identities=18% Similarity=0.117 Sum_probs=214.6
Q ss_pred CCCCCCCCCCCC--CCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhc
Q 005334 79 SETLFPTSEVQS--EVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAA 156 (701)
Q Consensus 79 ~~~~~~~~~~G~--gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaA 156 (701)
...+|+. .+|+ ||+||||||||| +||+|.++. +.+..+... + .......+.|..||||||||||+
T Consensus 32 ~~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~~-------~~~~~~~~~-~---~~~~~~~~~d~~gHGT~vAgiia 98 (347)
T 2iy9_A 32 LTETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDSE-------FAKFSFTQD-G---SPFPVKKSEALYIHGTAMASLIA 98 (347)
T ss_dssp CCHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTCE-------EEEEECBTT-C---CSSCCSSSHHHHHHHHHHHHHHH
T ss_pred hHHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcCc-------ccCCcccCC-C---CCCCCCCCCCCCCcHHHHHHHHh
Confidence 3568887 8899 999999999999 999998752 222211110 0 00111245678899999999999
Q ss_pred ccccCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHHc------CCeEEEEeccCCCCCCccCHHH
Q 005334 157 GSVVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIED------GVNVMSMSIGGGLTDYYRDTVA 230 (701)
Q Consensus 157 G~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~~------gvdVInlSlG~~~~~~~~d~i~ 230 (701)
|+ .| +.||||+|+|+.+|+++..+.. ++++||+||+++ |++|||||||........+.+.
T Consensus 99 ~~-------~g-----~~GvAp~a~l~~~~v~~~~~~~--~~~~ai~~a~~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~ 164 (347)
T 2iy9_A 99 SR-------YG-----IYGVYPHALISSRRVIPDGVQD--SWIRAIESIMSNVFLAPGEEKIINISGGQKGVASASVWTE 164 (347)
T ss_dssp CS-------SS-----SCCSSTTCEEEEEECCSSBCTT--HHHHHHHHHHTCTTSCTTEEEEEEESSCBCCC-CCHHHHH
T ss_pred cc-------cC-----CcccCCCCEEEEEEEecCCCHH--HHHHHHHHHHhhhhcccCCceEEEeccccCCCCCcCHHHH
Confidence 97 12 3899999999999999765533 999999999999 9999999999865444567788
Q ss_pred HHHHHHHHCCCEEEEecCCCCCC-------CCccccCCC----------ceEEecCCcc--CceeeeEEEcCCCcEEEEE
Q 005334 231 IGAFTAMAQGIFVSCSAGNGGPY-------ANSISNVAP----------WITTVGAGTL--DRNFPTYVSLGNGKSFSGV 291 (701)
Q Consensus 231 ~a~~~a~~~Gi~vV~AAGN~G~~-------~~~~~~~ap----------~vitVgAst~--~~~~~~~~~l~~g~~~~g~ 291 (701)
.++..+.++|++||+||||+|.. ...++...| ++|+|||++. +...
T Consensus 165 ~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~vi~Vga~~~~~~g~~--------------- 229 (347)
T 2iy9_A 165 LLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDPVIRVAALAQYRKGET--------------- 229 (347)
T ss_dssp HHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCCEEEEEEECCCCTTSC---------------
T ss_pred HHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCCEEEEEEcccCCCCce---------------
Confidence 88889999999999999999975 345666777 8999988532 1000
Q ss_pred EeecCCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcc
Q 005334 292 SLYSRRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEE 371 (701)
Q Consensus 292 s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~ 371 (701)
T Consensus 230 -------------------------------------------------------------------------------- 229 (347)
T 2iy9_A 230 -------------------------------------------------------------------------------- 229 (347)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEec
Q 005334 372 LVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAG 451 (701)
Q Consensus 372 ~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa 451 (701)
......++.||++||+ ||||+|||++|+++
T Consensus 230 -------------------------------------------~~~~~~~~~fS~~G~~-------~~di~APG~~i~s~ 259 (347)
T 2iy9_A 230 -------------------------------------------PVLHGGGITGSRFGNN-------WVDIAAPGQNITFL 259 (347)
T ss_dssp -------------------------------------------CCBCCCSSSCBCBCTT-------TCSEEEECSSEEEE
T ss_pred -------------------------------------------ecccCCCCCCCCCCCC-------CCEEEeCCCCeEee
Confidence 0001245799999995 67999999999999
Q ss_pred ccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCC
Q 005334 452 WTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTP 531 (701)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~ 531 (701)
++.+ .|..++|||||||||||++|||+|++|+|++.+||++|++||++....+ .
T Consensus 260 ~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~~~~-------------~ 313 (347)
T 2iy9_A 260 RPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRATATELKRTLLESADKYPSLV-------------D 313 (347)
T ss_dssp CTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHSEECGGGT-------------T
T ss_pred cCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCCCC-------------C
Confidence 8764 7999999999999999999999999999999999999999999875321 1
Q ss_pred CCCCccccCccccCCC
Q 005334 532 FDFGAGHVDPVAALDP 547 (701)
Q Consensus 532 ~~~G~G~vn~~~A~~~ 547 (701)
..+|+|+||+.+|++.
T Consensus 314 ~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 314 KVTEGRVLNAEKAISM 329 (347)
T ss_dssp TSGGGEECCHHHHHHH
T ss_pred ccccCCEecHHHHHHH
Confidence 3999999999999984
No 23
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=6e-48 Score=427.54 Aligned_cols=291 Identities=27% Similarity=0.324 Sum_probs=221.0
Q ss_pred CCCCC-CCCCCCCCEEEEEccCCCC------CCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHH
Q 005334 80 ETLFP-TSEVQSEVIVGVLDTGVWP------EIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTS 152 (701)
Q Consensus 80 ~~~~~-~~~~G~gVvVgVIDtGId~------~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvA 152 (701)
+.+|+ .+++|+||+|||||||||+ .||+|.++.. . .++. .+...+.|..|||||||
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~i~-------~--~~~~--------~~~~~~~d~~gHGT~VA 73 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGKIT-------A--LYAL--------GRTNNANDTNGHGTHVA 73 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTCEE-------E--EEET--------TTTTCCCCSSSHHHHHH
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCCEe-------e--eccc--------cCCCCCCCCCCcHHHHH
Confidence 35787 6899999999999999999 7999986511 1 1111 11135678899999999
Q ss_pred HhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCCC---ChHHHHHHHHHHHHcCCeEEEEeccCCCCCCccCHH
Q 005334 153 TTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAGC---FGSDILAGMDKAIEDGVNVMSMSIGGGLTDYYRDTV 229 (701)
Q Consensus 153 giaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~---~~~~i~~ai~~ai~~gvdVInlSlG~~~~~~~~d~i 229 (701)
|||+|+.. .+.||||+|+|+.+|+++..|. ...++.++|++|+++|++|||||||......+ +..
T Consensus 74 giiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~~~~~~~~~~ai~~a~~~g~~Vin~S~G~~~~~~~-~~~ 141 (434)
T 1wmd_A 74 GSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGLGGLPSNLQTLFSQAYSAGARIHTNSWGAAVNGAY-TTD 141 (434)
T ss_dssp HHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSCTTSCSSHHHHHHHHHHTTCSEEEECCCBCCTTCC-CHH
T ss_pred HHHHcCCC-----------CceeeCCCCEEEEEEeecCCCccccccHHHHHHHHHHHhcCCeEEEecCCCCcCCcC-CHH
Confidence 99998631 1479999999999999987663 45689999999999999999999998652222 334
Q ss_pred HHHHHHH-HHCCCEEEEecCCCCCCCC--ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeE
Q 005334 230 AIGAFTA-MAQGIFVSCSAGNGGPYAN--SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPI 306 (701)
Q Consensus 230 ~~a~~~a-~~~Gi~vV~AAGN~G~~~~--~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l 306 (701)
..++.++ .++|++||+||||+|.... ..+..+|++|+|||++..+...
T Consensus 142 ~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~----------------------------- 192 (434)
T 1wmd_A 142 SRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF----------------------------- 192 (434)
T ss_dssp HHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-----------------------------
T ss_pred HHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-----------------------------
Confidence 4444444 5899999999999997643 4566889999999964321100
Q ss_pred EEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEech
Q 005334 307 VDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGE 386 (701)
Q Consensus 307 ~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~ 386 (701)
+ .
T Consensus 193 ----------------------------------~---------------~----------------------------- 194 (434)
T 1wmd_A 193 ----------------------------------G---------------S----------------------------- 194 (434)
T ss_dssp ----------------------------------C---------------G-----------------------------
T ss_pred ----------------------------------C---------------c-----------------------------
Confidence 0 0
Q ss_pred hhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcc
Q 005334 387 KAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKR 466 (701)
Q Consensus 387 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~ 466 (701)
+ ....+.++.||++||+. ++++||||+|||++|+++++........ ....
T Consensus 195 --------~-------------------~~~~~~~a~fS~~G~~~--~g~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~ 244 (434)
T 1wmd_A 195 --------Y-------------------ADNINHVAQFSSRGPTK--DGRIKPDVMAPGTFILSARSSLAPDSSF-WANH 244 (434)
T ss_dssp --------G-------------------GSCTTSBCTTSCCCCCT--TSCCCCCEEEECSSEEEECCTTCCGGGS-SEEE
T ss_pred --------c-------------------cCCCCccccccCCCCCC--CCCCCceEEcCCCCeEecCCCCCCCccc-ccCC
Confidence 0 01234789999999998 6999999999999999998653210000 0011
Q ss_pred cceeEeeccccchhhhHhHHHHHHHhhCCCC-----CHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCc
Q 005334 467 HVSFNIISGTSMSCPHVSGLAALLKAAHPEW-----SPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDP 541 (701)
Q Consensus 467 ~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~-----sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~ 541 (701)
...|..++|||||||||||++|||+|++|++ ++++||++|++||+++.. ..+.+.+|||+||+
T Consensus 245 ~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA~~~~~------------~~~~~~~G~G~vd~ 312 (434)
T 1wmd_A 245 DSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGAADIGL------------GYPNGNQGWGRVTL 312 (434)
T ss_dssp ETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHCBCCSS------------CSSCTTTTTCBCCH
T ss_pred CCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCCcccCC------------CCCCccCCcCeEeH
Confidence 2479999999999999999999999999876 999999999999987531 23456999999999
Q ss_pred cccCCCC
Q 005334 542 VAALDPG 548 (701)
Q Consensus 542 ~~A~~~g 548 (701)
.+|++..
T Consensus 313 ~~a~~~~ 319 (434)
T 1wmd_A 313 DKSLNVA 319 (434)
T ss_dssp HHHHTCE
T ss_pred HHhcccc
Confidence 9999754
No 24
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=6.6e-48 Score=414.16 Aligned_cols=283 Identities=28% Similarity=0.378 Sum_probs=218.4
Q ss_pred CCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceee--E--ecccCC----c------------cCCCCC
Q 005334 79 SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVW--Y--EEAVGP----I------------DETAES 138 (701)
Q Consensus 79 ~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~--~--~~~~~~----~------------~~~~~~ 138 (701)
+..+|+.+++|+||+||||||||+ +||+|.++... .|+-.. . ....+. . ......
T Consensus 21 ~~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~~----~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (340)
T 3lpc_A 21 ADKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVLP----GYDFISNSQISLDGDGRDADPFDEGDWFDNWACGGRPDPR 95 (340)
T ss_dssp HHHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBCC----CEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTSCTTCGG
T ss_pred HHHHHHhcCCCCCeEEEEEcCCCC-CChhhhccccc----CccccCCccccccCCCccCCccccccccccccccCCCCcc
Confidence 356999999999999999999998 99999875322 111000 0 000000 0 001111
Q ss_pred CCCCCCCCChhHHHHhhcccccCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHH----------c
Q 005334 139 KSPRDDDGHGTHTSTTAAGSVVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIE----------D 208 (701)
Q Consensus 139 ~~~~D~~gHGThvAgiaAG~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~----------~ 208 (701)
....|..||||||||||+|...+.. | +.||||+|+|+.+|+++..++...+++++|+||++ .
T Consensus 96 ~~~~d~~gHGT~vAgiia~~~~~~~---g-----~~GvAp~a~l~~~~v~~~~~~~~~~~~~ai~~a~~~~~~~~~~~~~ 167 (340)
T 3lpc_A 96 KERSDSSWHGSHVAGTIAAVTNNRI---G-----VAGVAYGAKVVPVRALGRCGGYDSDISDGLYWAAGGRIAGIPENRN 167 (340)
T ss_dssp GSCBCCCCHHHHHHHHHHCCCSSSS---S-----CCCTTTTSEEEEEECCBTTBCCHHHHHHHHHHHHTCCCTTSCCCSS
T ss_pred cCCCCCCCCHHHHHHHHHccCCCCC---c-----ceeecCCCEEEEEEEecCCCCcHHHHHHHHHHHhcccccccccccC
Confidence 2356889999999999999854332 2 38999999999999998888889999999999998 8
Q ss_pred CCeEEEEeccCCCCCCccCHHHHHHHHHHHCCCEEEEecCCCCCCCC-ccccCCCceEEecCCccCceeeeEEEcCCCcE
Q 005334 209 GVNVMSMSIGGGLTDYYRDTVAIGAFTAMAQGIFVSCSAGNGGPYAN-SISNVAPWITTVGAGTLDRNFPTYVSLGNGKS 287 (701)
Q Consensus 209 gvdVInlSlG~~~~~~~~d~i~~a~~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~ 287 (701)
+++|||||||... .....+..++.+|.++|++||+||||+|.... ..+...|++|+|||++
T Consensus 168 ~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~---------------- 229 (340)
T 3lpc_A 168 PAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATT---------------- 229 (340)
T ss_dssp CCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEEC----------------
T ss_pred CCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCC----------------
Confidence 9999999999743 22345667777889999999999999997643 4566788999999832
Q ss_pred EEEEEeecCCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCC
Q 005334 288 FSGVSLYSRRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDS 367 (701)
Q Consensus 288 ~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~ 367 (701)
T Consensus 230 -------------------------------------------------------------------------------- 229 (340)
T 3lpc_A 230 -------------------------------------------------------------------------------- 229 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCc
Q 005334 368 YGEELVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVN 447 (701)
Q Consensus 368 ~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~ 447 (701)
..+.++.||++|| ||||+|||++
T Consensus 230 -------------------------------------------------~~~~~~~~S~~g~--------~~di~ApG~~ 252 (340)
T 3lpc_A 230 -------------------------------------------------SRGIRASFSNYGV--------DVDLAAPGQD 252 (340)
T ss_dssp -------------------------------------------------TTSSBCTTCCBST--------TCCEEEECSS
T ss_pred -------------------------------------------------CCCCcCCCCCCCC--------CceEEecCCC
Confidence 1126788999997 5699999999
Q ss_pred EEecccCCCCCCCCCCCcccceeEeeccccchhhhHhHHHHHHHhh-C---CCCCHHHHHHHHHhccccCCCCCcccccC
Q 005334 448 ILAGWTGAVGPTGLESDKRHVSFNIISGTSMSCPHVSGLAALLKAA-H---PEWSPSAIKSALMTTAYSTNGNGKTLLDI 523 (701)
Q Consensus 448 I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~-~---P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~ 523 (701)
|+++++..... .....|..++|||||||||||++|||+|+ + |+|++++||++|++||+++..
T Consensus 253 i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~tA~~~~~-------- 318 (340)
T 3lpc_A 253 ILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVSTTSPFNG-------- 318 (340)
T ss_dssp EEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCSS--------
T ss_pred eecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhcCCcCCC--------
Confidence 99998765321 11246999999999999999999999998 5 999999999999999998741
Q ss_pred CCCCCCCCCCCCccccCccccCCCC
Q 005334 524 STGQPSTPFDFGAGHVDPVAALDPG 548 (701)
Q Consensus 524 ~~~~~~~~~~~G~G~vn~~~A~~~g 548 (701)
.....+|+|+||+.+|++..
T Consensus 319 -----~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 319 -----RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp -----CCSSCCCSSBCCHHHHHHHH
T ss_pred -----CCCCCcccceecHHHHHHHH
Confidence 12348999999999998743
No 25
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=1.3e-46 Score=392.51 Aligned_cols=235 Identities=29% Similarity=0.424 Sum_probs=198.4
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|||||||||++||+|.++.. . .|+. ......+.|..||||||||||+|+.
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~~~-------~--~~~~-------~~~~~~~~d~~gHGT~vAgiia~~~ 82 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGRSV-------S--GYDF-------VDNDADSSDCNGHGTHVAGTIGGSQ 82 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTCEE-------E--EEET-------TTTBSCCCCSSSHHHHHHHHHHCTT
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCCcc-------c--cccc-------cCCCCCCCCCCCcHHHHHHHHhccc
Confidence 4689999999999999999999999999987521 1 1221 1122346789999999999999873
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc--CCeEEEEeccCCCCCCccCHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED--GVNVMSMSIGGGLTDYYRDTVAIGAFTA 236 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~--gvdVInlSlG~~~~~~~~d~i~~a~~~a 236 (701)
.||||+|+|+.+|+++..+ +..+++++||+|++++ +++|||||||.. ....+..++.++
T Consensus 83 --------------~GvAp~a~l~~~kv~~~~g~~~~~~~~~ai~~a~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a 144 (284)
T 1sh7_A 83 --------------YGVAKNVNIVGVRVLSCSGSGTTSGVISGVDWVAQNASGPSVANMSLGGG----QSTALDSAVQGA 144 (284)
T ss_dssp --------------TCSSTTCEEEEEECBCTTSCBCHHHHHHHHHHHHHHCCSSEEEEECCCBS----CCHHHHHHHHHH
T ss_pred --------------CCcCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhCCCCCcEEEeCCCCC----CCHHHHHHHHHH
Confidence 6999999999999998776 6788999999999984 799999999985 245677778889
Q ss_pred HHCCCEEEEecCCCCCCCC-ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCC
Q 005334 237 MAQGIFVSCSAGNGGPYAN-SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSST 315 (701)
Q Consensus 237 ~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~ 315 (701)
.++|++||+||||+|.... ..+...|++|+|||++
T Consensus 145 ~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------------------------------- 180 (284)
T 1sh7_A 145 IQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTT-------------------------------------------- 180 (284)
T ss_dssp HHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEEC--------------------------------------------
T ss_pred HHCCCEEEEECCcCCCCCCccccccCCCeEEEEEec--------------------------------------------
Confidence 9999999999999997543 4566789999999832
Q ss_pred cCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHh
Q 005334 316 SSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNY 395 (701)
Q Consensus 316 ~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~ 395 (701)
T Consensus 181 -------------------------------------------------------------------------------- 180 (284)
T 1sh7_A 181 -------------------------------------------------------------------------------- 180 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeecc
Q 005334 396 ISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISG 475 (701)
Q Consensus 396 ~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 475 (701)
..+.++.||++||.. ||+|||++|+++++.+ .|..++|
T Consensus 181 ---------------------~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~-------------~~~~~sG 218 (284)
T 1sh7_A 181 ---------------------SSDSRSSFSNWGSCV--------DLFAPGSQIKSAWYDG-------------GYKTISG 218 (284)
T ss_dssp ---------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTS-------------SEEEECS
T ss_pred ---------------------CCCCcCcccCCCCcc--------EEEeccCCeEEecCCC-------------CEEEccC
Confidence 112678899999965 9999999999998764 7899999
Q ss_pred ccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 005334 476 TSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTN 514 (701)
Q Consensus 476 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 514 (701)
||||||||||++|||+|++|+|++++||++|++||++..
T Consensus 219 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 257 (284)
T 1sh7_A 219 TSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASENK 257 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred hHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCC
Confidence 999999999999999999999999999999999999764
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=4.6e-46 Score=387.86 Aligned_cols=237 Identities=32% Similarity=0.424 Sum_probs=197.6
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|+|||||||++||+|.++.. ..++. .....++.|..||||||||||+|+.
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~~~---------~~~d~-------~~~~~~~~d~~gHGT~vAgiia~~~ 84 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGRAS---------SGYDF-------IDNDYDATDCNGHGTHVAGTIGGST 84 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTCEE---------EEEET-------TTTBSCCCCSSSHHHHHHHHHHCTT
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcccc---------cCeec-------CCCCCCCCCCCCcHHHHHHHHHCCC
Confidence 4579999999999999999999999999987521 11221 1122346789999999999999862
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHH--cCCeEEEEeccCCCCCCccCHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIE--DGVNVMSMSIGGGLTDYYRDTVAIGAFTA 236 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~--~gvdVInlSlG~~~~~~~~d~i~~a~~~a 236 (701)
.||||+|+|+.+|++++.+ +..++++++|+|+++ .+++|||||||... ...+..++.++
T Consensus 85 --------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~g~~Vin~S~G~~~----~~~~~~ai~~a 146 (278)
T 2b6n_A 85 --------------YGVAKNVNVVGVRVLNCSGSGSNSGVIAGINWVKNNASGPAVANMSLGGGA----SQATDDAVNAA 146 (278)
T ss_dssp --------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHH
T ss_pred --------------cCCCCCCeEEEEEEECCCCCccHHHHHHHHHHHHhCCCCCeEEEECCCCCc----CHHHHHHHHHH
Confidence 6999999999999998776 778899999999998 59999999999854 35667777788
Q ss_pred HHCCCEEEEecCCCCCCCC-ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCC
Q 005334 237 MAQGIFVSCSAGNGGPYAN-SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSST 315 (701)
Q Consensus 237 ~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~ 315 (701)
.++|++||+||||+|.... ..+...|++|+|||.+
T Consensus 147 ~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------------------------------- 182 (278)
T 2b6n_A 147 VAAGITFVVAAGNDNSNACNYSPARAADAITVGSTT-------------------------------------------- 182 (278)
T ss_dssp HHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------------------------------
T ss_pred HHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeC--------------------------------------------
Confidence 9999999999999997653 3466788999999832
Q ss_pred cCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHh
Q 005334 316 SSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNY 395 (701)
Q Consensus 316 ~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~ 395 (701)
T Consensus 183 -------------------------------------------------------------------------------- 182 (278)
T 2b6n_A 183 -------------------------------------------------------------------------------- 182 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeecc
Q 005334 396 ISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISG 475 (701)
Q Consensus 396 ~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 475 (701)
..+.++.||++||.. ||+|||++|++++.... ..|..++|
T Consensus 183 ---------------------~~~~~~~~S~~G~~~--------di~ApG~~i~s~~~~~~-----------~~~~~~sG 222 (278)
T 2b6n_A 183 ---------------------SNDSRSSFSNYGTCL--------DIYAPGSSITSSWYTSN-----------SATNTISG 222 (278)
T ss_dssp ---------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTST-----------TCEEEECS
T ss_pred ---------------------CCCCcCCcCCCCCCC--------eEEeCCCCeECcccCCC-----------CCEEEeCc
Confidence 112667899999854 99999999999886531 27899999
Q ss_pred ccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 005334 476 TSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTN 514 (701)
Q Consensus 476 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 514 (701)
||||||||||++|||+|++|+|++.+||++|++||++..
T Consensus 223 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 261 (278)
T 2b6n_A 223 TSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATADK 261 (278)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC
Confidence 999999999999999999999999999999999998753
No 27
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=1.5e-46 Score=431.94 Aligned_cols=298 Identities=22% Similarity=0.193 Sum_probs=202.2
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCC-CCCChhHHHHhhccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRD-DDGHGTHTSTTAAGS 158 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D-~~gHGThvAgiaAG~ 158 (701)
..+|..+++|+||+|||||||||++||+|.++... +. ++... ......|.| ..||||||||||||.
T Consensus 60 ~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~~~-------~~-~~~~~-----~~~d~~p~d~~~gHGT~vAGiiaa~ 126 (600)
T 2oxa_A 60 WWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNVRP-------GS-KNVVT-----GSDDPTPTDPDTGHGTSVSGIIAAV 126 (600)
T ss_dssp HHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGBCS-------CC-BCTTT-----CSSCCCCCSTTCCHHHHHHHHHHCC
T ss_pred HHHHhcCCCCCCcEEEEecCCcCCCCcchhhcccc-------Cc-eeccC-----CCCCCCCCCCCCCCccHHHHHhhcc
Confidence 45899999999999999999999999999875221 10 11111 111223455 789999999999998
Q ss_pred ccCCCcccccCCCceeeecCCCeEEEEEeecCCCCCh--HHHHHHHHHHHHcCCeEEEEeccCCCC-CCcc----CHHHH
Q 005334 159 VVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFG--SDILAGMDKAIEDGVNVMSMSIGGGLT-DYYR----DTVAI 231 (701)
Q Consensus 159 ~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~--~~i~~ai~~ai~~gvdVInlSlG~~~~-~~~~----d~i~~ 231 (701)
.++. | +.||||+|+|+.+|+++..+... ..+++....+..++++|||||||.... .... ..+..
T Consensus 127 -~n~~---g-----~~GVAp~A~l~~vkv~~~~~~~~~~~~~~~~~~~a~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~ 197 (600)
T 2oxa_A 127 -DNAI---G-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNHSYRMSVVDPRSANSLDQSQLD 197 (600)
T ss_dssp -SSSS---S-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTTSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHH
T ss_pred -cCCC---c-----ceEEccCCceEEEeeecCcccchHHHHHHHHhhhhcccCCeEEEEeccCCCCCccccCchhHHHHH
Confidence 3321 2 38999999999999998776432 344454445778899999999998642 1111 22222
Q ss_pred HHHH---HHHCCCEEEEecCCCCCCCC----------------------ccccCCCceEEecCCccCceeeeEEEcCCCc
Q 005334 232 GAFT---AMAQGIFVSCSAGNGGPYAN----------------------SISNVAPWITTVGAGTLDRNFPTYVSLGNGK 286 (701)
Q Consensus 232 a~~~---a~~~Gi~vV~AAGN~G~~~~----------------------~~~~~ap~vitVgAst~~~~~~~~~~l~~g~ 286 (701)
++.. +.++|++||+||||+|+... ...+.+||+|+|||.
T Consensus 198 ~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~~~~~~s~~vItVgA~---------------- 261 (600)
T 2oxa_A 198 RLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNLDPSNSNFWNLVVSAL---------------- 261 (600)
T ss_dssp HHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTSSGGGGSSSEEEEEEE----------------
T ss_pred HHHHHHHhccCCcEEEEecCCCCccCCCCcceecCccccccccccccccCCcccCceeEEEecc----------------
Confidence 2222 44789999999999986321 111123334444431
Q ss_pred EEEEEEeecCCCCCCceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecC
Q 005334 287 SFSGVSLYSRRPLSGSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTD 366 (701)
Q Consensus 287 ~~~g~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~ 366 (701)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCC
Q 005334 367 SYGEELVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGV 446 (701)
Q Consensus 367 ~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~ 446 (701)
...+.++.||++||+. ||+|||+
T Consensus 262 -------------------------------------------------~~~g~~a~fS~~G~~v--------dv~APG~ 284 (600)
T 2oxa_A 262 -------------------------------------------------NADGVRSSYSSVGSNI--------FLSATGG 284 (600)
T ss_dssp -------------------------------------------------CTTSSBCTTCCBCTTE--------EEEEECC
T ss_pred -------------------------------------------------cCCCCcCCcCCCCCCe--------EEEeccC
Confidence 2234788999999987 9999999
Q ss_pred cEEecccC-------CCC--CC------------CCCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHH
Q 005334 447 NILAGWTG-------AVG--PT------------GLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSA 505 (701)
Q Consensus 447 ~I~sa~~~-------~~~--~~------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~ 505 (701)
+|.+..+. ... .. ....+.....|..++|||||||||||+||||+|++|+|++++||++
T Consensus 285 ~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~ 364 (600)
T 2oxa_A 285 EYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDL 364 (600)
T ss_dssp SCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHH
T ss_pred CCCcCCCceEeccccccccccccccccccccccccccccCCcccccccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHH
Confidence 96544331 100 00 0000111234899999999999999999999999999999999999
Q ss_pred HHhccccCCCCCcccc-------------------cCCCCCCCCCCCCCccccCccccCCCCcccc
Q 005334 506 LMTTAYSTNGNGKTLL-------------------DISTGQPSTPFDFGAGHVDPVAALDPGLVYD 552 (701)
Q Consensus 506 L~~TA~~~~~~g~~~~-------------------~~~~~~~~~~~~~G~G~vn~~~A~~~glv~d 552 (701)
|++||++++..+.++. ..........+.||||+||+.+|++.+.-+.
T Consensus 365 L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~~~G~G~vda~~Av~~A~~~~ 430 (600)
T 2oxa_A 365 LARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANHQ 430 (600)
T ss_dssp HHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTCC
T ss_pred HHHhCccCCcccccccccccccccccccccccccccccCCCccccccCCCchhhHHHHHHHHHhcc
Confidence 9999999875542211 0001122234689999999999998655443
No 28
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=7.3e-46 Score=386.33 Aligned_cols=235 Identities=30% Similarity=0.446 Sum_probs=199.1
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+.+|+||+|||||||||++||+|.++. +.+ ++.. ...+.|..||||||||||+|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~~-------~~~--~~~~---------~~~~~d~~gHGT~vAgiiag~~ 82 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGRA-------RVG--YDAL---------GGNGQDCNGHGTHVAGTIGGVT 82 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTCE-------EEE--EETT---------SSCSCCSSSHHHHHHHHHHCTT
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccCe-------ecc--ccCC---------CCCCCCCCCCHHHHHHHHHccc
Confidence 568999999999999999999999999998752 111 1111 1346788999999999999873
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc--CCeEEEEeccCCCCCCccCHHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED--GVNVMSMSIGGGLTDYYRDTVAIGAFTA 236 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~--gvdVInlSlG~~~~~~~~d~i~~a~~~a 236 (701)
.|+||+|+|+.+|+++..+ ....+++++|+|+++. +++|||||||... ...+..++.++
T Consensus 83 --------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~vin~S~g~~~----~~~~~~a~~~a 144 (276)
T 4dzt_A 83 --------------YGVAKAVNLYAVRVLDCNGSGSTSGVIAGVDWVTRNHRRPAVANMSLGGGV----STALDNAVKNS 144 (276)
T ss_dssp --------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHCCSSEEEEECCCEEC----CHHHHHHHHHH
T ss_pred --------------cCCCCCCEEEEEEEeCCCCCcCHHHHHHHHHHHHhcCCCCeEEEECCCCCC----CHHHHHHHHHH
Confidence 7999999999999998776 7888999999999997 8999999999743 46677788899
Q ss_pred HHCCCEEEEecCCCCCCCCc-cccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCCCC
Q 005334 237 MAQGIFVSCSAGNGGPYANS-ISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVSST 315 (701)
Q Consensus 237 ~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~~~ 315 (701)
.++|+++|+||||+|..... .+...|++|+|||.+
T Consensus 145 ~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~-------------------------------------------- 180 (276)
T 4dzt_A 145 IAAGVVYAVAAGNDNANACNYSPARVAEALTVGATT-------------------------------------------- 180 (276)
T ss_dssp HHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC--------------------------------------------
T ss_pred HhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEEC--------------------------------------------
Confidence 99999999999999976543 366788899998832
Q ss_pred cCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHHHh
Q 005334 316 SSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIKNY 395 (701)
Q Consensus 316 ~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~ 395 (701)
T Consensus 181 -------------------------------------------------------------------------------- 180 (276)
T 4dzt_A 181 -------------------------------------------------------------------------------- 180 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEeecc
Q 005334 396 ISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNIISG 475 (701)
Q Consensus 396 ~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sG 475 (701)
..+.++.||++||.. ||+|||++|++++.... ..|..++|
T Consensus 181 ---------------------~~~~~~~~S~~g~~~--------dv~ApG~~i~s~~~~~~-----------~~~~~~sG 220 (276)
T 4dzt_A 181 ---------------------SSDARASFSNYGSCV--------DLFAPGASIPSAWYTSD-----------TATQTLNG 220 (276)
T ss_dssp ---------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECTTSS-----------SCEEEECS
T ss_pred ---------------------CCCCcCCcCCCCCCc--------eEEeCCCCeEccccCCC-----------CceEEeeE
Confidence 122678899999976 99999999999987642 26899999
Q ss_pred ccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 005334 476 TSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTN 514 (701)
Q Consensus 476 TSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 514 (701)
||||||||||++|||+|++|+|++++||++|++||++..
T Consensus 221 TS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 221 TSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999999999999999999999999999999874
No 29
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=4.2e-46 Score=387.79 Aligned_cols=241 Identities=32% Similarity=0.417 Sum_probs=200.8
Q ss_pred CCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccC
Q 005334 82 LFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVN 161 (701)
Q Consensus 82 ~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~ 161 (701)
.|. ..+|+||+|+|||||||++||+|.++.. .+ ++. . ..+.|..||||||||||+|+.
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~~~-------~~--~~~-------~---~~~~d~~gHGT~vAgiia~~~-- 81 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGRAQ-------MV--KTY-------Y---YSSRDGNGHGTHCAGTVGSRT-- 81 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTCEE-------EE--EES-------S---SCSSCSSSHHHHHHHHHHCTT--
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCccc-------cc--cCC-------C---CCCCCCCCCHHHHHHHHHhcc--
Confidence 454 3689999999999999999999987521 11 111 1 236788999999999999872
Q ss_pred CCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcCC-------eEEEEeccCCCCCCccCHHHHHH
Q 005334 162 GASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDGV-------NVMSMSIGGGLTDYYRDTVAIGA 233 (701)
Q Consensus 162 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~gv-------dVInlSlG~~~~~~~~d~i~~a~ 233 (701)
.||||+|+|+.+|+++..+ +..+++++||+|++++++ +|||||||.. +.+.+..++
T Consensus 82 ------------~GvAp~a~i~~~~v~~~~g~~~~~~~~~ai~~a~~~~~~~~~~~~~Vin~S~G~~----~~~~~~~ai 145 (279)
T 2pwa_A 82 ------------YGVAKKTQLFGVKVLDDNGSGQYSTIIAGMDFVASDKNNRNCPKGVVASLSLGGG----YSSSVNSAA 145 (279)
T ss_dssp ------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHH
T ss_pred ------------cccCCCCEEEEEEeEcCCCCcCHHHHHHHHHHHHhcCccccCCCccEEEecCCCC----CCHHHHHHH
Confidence 7999999999999998876 788999999999999987 9999999974 346677788
Q ss_pred HHHHHCCCEEEEecCCCCCCCC-ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCC
Q 005334 234 FTAMAQGIFVSCSAGNGGPYAN-SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANV 312 (701)
Q Consensus 234 ~~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~ 312 (701)
.++.++|++||+||||+|.... ..+...|++|+|||++
T Consensus 146 ~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------------------------------- 184 (279)
T 2pwa_A 146 ARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASD----------------------------------------- 184 (279)
T ss_dssp HHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------------------------------
T ss_pred HHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEec-----------------------------------------
Confidence 8899999999999999997643 3566789999999832
Q ss_pred CCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHH
Q 005334 313 SSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAI 392 (701)
Q Consensus 313 ~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l 392 (701)
T Consensus 185 -------------------------------------------------------------------------------- 184 (279)
T 2pwa_A 185 -------------------------------------------------------------------------------- 184 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEe
Q 005334 393 KNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNI 472 (701)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 472 (701)
..+.++.||++||.. ||+|||++|+++++.+ .|..
T Consensus 185 ------------------------~~~~~~~~S~~G~~~--------di~APG~~i~s~~~~~-------------~~~~ 219 (279)
T 2pwa_A 185 ------------------------RYDRRSSFSNYGSVL--------DIFGPGTDILSTWIGG-------------STRS 219 (279)
T ss_dssp ------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEEETTT-------------EEEE
T ss_pred ------------------------CCCCcCCcCCCCCcc--------eEEEecCCeEEeecCC-------------CEEE
Confidence 112678899999864 9999999999998764 7999
Q ss_pred eccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCccc
Q 005334 473 ISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVA 543 (701)
Q Consensus 473 ~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~ 543 (701)
++|||||||||||++|||+|+ |++++.+||++|++||++.... .+|+|..|+..
T Consensus 220 ~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~~----------------~~~~g~~n~l~ 273 (279)
T 2pwa_A 220 ISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDLS----------------NIPFGTVNLLA 273 (279)
T ss_dssp ECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCCB----------------SCCTTSCCEEC
T ss_pred cCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCcccccC----------------CCCCCCccEee
Confidence 999999999999999999999 9999999999999999976311 56778777643
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=4.5e-46 Score=416.02 Aligned_cols=292 Identities=16% Similarity=0.153 Sum_probs=213.4
Q ss_pred CCCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhccc
Q 005334 79 SETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGS 158 (701)
Q Consensus 79 ~~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~ 158 (701)
+..+|..+++|+||+|||||||||++||+|.++... +..|+..... ....+...+.|..||||||||||||.
T Consensus 27 ~~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~~~-------~~~~d~~~~~-~~p~~~~~~~d~~gHGT~vAGiiaa~ 98 (471)
T 1p8j_A 27 VKEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNYDP-------GASFDVNDQD-PDPQPRYTQMNDNRHGTRCAGEVAAV 98 (471)
T ss_dssp CHHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGBCG-------GGCEETTTTB-SCCCCCCCTTCTTCHHHHHHHHHHCC
T ss_pred hHHHHhcCCCCCCCEEEEEeCCcCCCChhHhhccCc-------cCcccccCCC-CCCCCccCCCCCCCcHHHHHHHHHee
Confidence 356899999999999999999999999999875211 1112221110 00111123568899999999999997
Q ss_pred ccCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHH-cCCeEEEEeccCCCCC----CccCHHHHHH
Q 005334 159 VVNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIE-DGVNVMSMSIGGGLTD----YYRDTVAIGA 233 (701)
Q Consensus 159 ~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~-~gvdVInlSlG~~~~~----~~~d~i~~a~ 233 (701)
..++. .+.||||+|+|+.+|+++ +..+++++|++++++ ++++|||||||..... .....+..++
T Consensus 99 ~~n~~--------g~~GvAp~a~i~~~rv~~---g~~~~~~~ai~~a~~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~ 167 (471)
T 1p8j_A 99 ANNGV--------CGVGVAYNARIGGVRMLD---GEVTDAVEARSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAF 167 (471)
T ss_dssp SSSSS--------SCCCTTTTSEEEEEECSS---SCCCHHHHHHHHTSCTTTCCEEEECCBSCCSSSCCBCCCHHHHHHH
T ss_pred ccCCC--------CCEEECCCCeEEEEEccC---CchhHHHHHHHhhhccCCCeEEEeccCcCCCCCcccCcHHHHHHHH
Confidence 53322 138999999999999985 446789999999999 9999999999985421 1123344444
Q ss_pred HHHH-----HCCCEEEEecCCCCCCCCc----cccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCcee
Q 005334 234 FTAM-----AQGIFVSCSAGNGGPYANS----ISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMV 304 (701)
Q Consensus 234 ~~a~-----~~Gi~vV~AAGN~G~~~~~----~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~ 304 (701)
.++. .+|++||+||||+|..... ....+|++|+|||.+
T Consensus 168 ~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~--------------------------------- 214 (471)
T 1p8j_A 168 FRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSAT--------------------------------- 214 (471)
T ss_dssp HHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEEC---------------------------------
T ss_pred HHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEeccc---------------------------------
Confidence 5554 3799999999999975322 123458899999832
Q ss_pred eEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEe
Q 005334 305 PIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANV 384 (701)
Q Consensus 305 ~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i 384 (701)
T Consensus 215 -------------------------------------------------------------------------------- 214 (471)
T 1p8j_A 215 -------------------------------------------------------------------------------- 214 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCC
Q 005334 385 GEKAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESD 464 (701)
Q Consensus 385 ~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~ 464 (701)
..+.++.||++||... ...+|...+||.+|+++....
T Consensus 215 --------------------------------~~g~~a~~S~~g~~~~--~~~~~~~~~~g~~i~st~~~~--------- 251 (471)
T 1p8j_A 215 --------------------------------QFGNVPWYSEACSSTL--ATTYSSGNQNEKQIVTTDLRQ--------- 251 (471)
T ss_dssp --------------------------------TTSCCCTTCCBCTTCC--EEEECCCSTTSCCEEEEETTT---------
T ss_pred --------------------------------CCCCcccccCCCCcce--EEeCCCCCCCCCCEEEeeCCC---------
Confidence 1226788999999873 344555555667999987643
Q ss_pred cccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccccCCCCCCCCCCCCCccccCcccc
Q 005334 465 KRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLLDISTGQPSTPFDFGAGHVDPVAA 544 (701)
Q Consensus 465 ~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~vn~~~A 544 (701)
..|..++|||||||||||++|||+|++|+|++++||++|++||++.+........+. ........||||+||+.+|
T Consensus 252 ---~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~n~-~g~~~~~~~G~G~vda~~A 327 (471)
T 1p8j_A 252 ---KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSKPAHLNADDWATNG-VGRKVSHSYGYGLLDAGAM 327 (471)
T ss_dssp ---EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCTTCCCSCCEECT-TSCEEBTTTBTCBCCHHHH
T ss_pred ---CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCccCCCCCCCceecC-CCcccCCCCCCEEEcHhHH
Confidence 368999999999999999999999999999999999999999998864432222111 1112345999999999999
Q ss_pred CCCCc
Q 005334 545 LDPGL 549 (701)
Q Consensus 545 ~~~gl 549 (701)
++...
T Consensus 328 v~~a~ 332 (471)
T 1p8j_A 328 VALAQ 332 (471)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 98544
No 31
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=5.6e-45 Score=409.91 Aligned_cols=283 Identities=18% Similarity=0.179 Sum_probs=211.8
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|||||||||++||+|.++.. ....|+.... ........|..||||||||||||..
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~~-------~~~~~d~~~~----~~~~~p~~d~~gHGT~vAGiiaa~~ 112 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNFC-------AEGSWDFNDN----TNLPKPRLSDDYHGTRCAGEIAAKK 112 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTBC-------GGGCEETTTT----BSCCCCCSTTTTHHHHHHHHHHCCS
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhccc-------ccCcccCCCC----CCCCCCCCCCCChHHHHHHHHHhcc
Confidence 4589999999999999999999999999987622 1111222111 1111123578899999999999975
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHHcCCeEEEEeccCCCCC----CccCHHHHHHHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIEDGVNVMSMSIGGGLTD----YYRDTVAIGAFT 235 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~~gvdVInlSlG~~~~~----~~~d~i~~a~~~ 235 (701)
.++. | +.||||+|+|+.+|+++.. +...++++||++|++++ +|||||||..... .....+..++.+
T Consensus 113 ~n~~---~-----~~GvAp~a~i~~~rv~~~~-~~~~~~~~ai~~a~~~~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~ 182 (503)
T 2id4_A 113 GNNF---C-----GVGVGYNAKISGIRILSGD-ITTEDEAASLIYGLDVN-DIYSCSWGPADDGRHLQGPSDLVKKALVK 182 (503)
T ss_dssp SSSS---S-----CCCTTTTSEEEEEECTTSC-CCHHHHHHHTTTTTTTC-SEEEECEESCCSSSCCBCCCHHHHHHHHH
T ss_pred CCCC---C-----cEEECCCCEEEEEEeeCCC-CChHHHHHHHHhHhhcC-CEEEeCCCcCCCCccccCchHHHHHHHHH
Confidence 3322 1 3799999999999999743 67888999999999988 9999999985421 122345556666
Q ss_pred HH-----HCCCEEEEecCCCCCCCC--ccc--cCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeE
Q 005334 236 AM-----AQGIFVSCSAGNGGPYAN--SIS--NVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPI 306 (701)
Q Consensus 236 a~-----~~Gi~vV~AAGN~G~~~~--~~~--~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l 306 (701)
+. .+|++||+||||+|.... .++ ..++++|+|||.+
T Consensus 183 a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~----------------------------------- 227 (503)
T 2id4_A 183 GVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAID----------------------------------- 227 (503)
T ss_dssp HHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEEC-----------------------------------
T ss_pred HHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeC-----------------------------------
Confidence 65 479999999999996532 222 2567889998832
Q ss_pred EEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEech
Q 005334 307 VDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGE 386 (701)
Q Consensus 307 ~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~ 386 (701)
T Consensus 228 -------------------------------------------------------------------------------- 227 (503)
T 2id4_A 228 -------------------------------------------------------------------------------- 227 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEe----cCCcEEecccCCCCCCCCC
Q 005334 387 KAGDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIA----PGVNILAGWTGAVGPTGLE 462 (701)
Q Consensus 387 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~A----PG~~I~sa~~~~~~~~~~~ 462 (701)
..+.++.||++||.. |++| ||..|+++....
T Consensus 228 ------------------------------~~~~~a~~S~~g~~~--------~~~a~~~gpG~~I~st~~~~------- 262 (503)
T 2id4_A 228 ------------------------------HKDLHPPYSEGCSAV--------MAVTYSSGSGEYIHSSDING------- 262 (503)
T ss_dssp ------------------------------TTSCCCTTCCCCTTE--------EEEEECSBTTBCEEEECSTT-------
T ss_pred ------------------------------CCCCcCCcCCCCCcc--------eEeecCCCCCCceEeecCCC-------
Confidence 122567899999987 8887 899999985432
Q ss_pred CCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCC-CcccccCCCCCCCCCCCCCccccCc
Q 005334 463 SDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGN-GKTLLDISTGQPSTPFDFGAGHVDP 541 (701)
Q Consensus 463 ~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~-g~~~~~~~~~~~~~~~~~G~G~vn~ 541 (701)
..|..++|||||||||||++|||+|++|+|++++||++|++||++++.. ......+. ........||||+||+
T Consensus 263 -----~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~~~~~~~~~~~~~~~-~g~~~~~~~G~G~vda 336 (503)
T 2id4_A 263 -----RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSILSAVGLEKNADGDWRDSA-MGKKYSHRYGFGKIDA 336 (503)
T ss_dssp -----CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCCTTCGGGCCEECS-SSSEEBTTTBTCBCCH
T ss_pred -----CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCcCCCceecC-CCCccCcccCCcEecH
Confidence 3799999999999999999999999999999999999999999987643 11111111 1112234899999999
Q ss_pred cccCCCCc
Q 005334 542 VAALDPGL 549 (701)
Q Consensus 542 ~~A~~~gl 549 (701)
.+|++...
T Consensus 337 ~~Av~~a~ 344 (503)
T 2id4_A 337 HKLIEMSK 344 (503)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998544
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=1.1e-44 Score=401.41 Aligned_cols=246 Identities=25% Similarity=0.300 Sum_probs=188.6
Q ss_pred CCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccC
Q 005334 82 LFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVN 161 (701)
Q Consensus 82 ~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~ 161 (701)
.|..+.+|+||+|+|||||||++||+|.++.. + ..|+.... .+.......+.|..||||||||||+|+.
T Consensus 18 aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~~------~--~~~~~v~~-~dg~~f~~~~~D~~GHGThVAGIIag~~-- 86 (546)
T 2qtw_B 18 EYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------V--TDFENVPE-EDGTRFHRQASKCDSHGTHLAGVVSGRD-- 86 (546)
T ss_dssp ------CCTTSEEEEEESCCCTTSTTTTTTEE------E--EEEECCCC-CC-------CTTTTHHHHHHHHHHHCTT--
T ss_pred hcccCCCCCCcEEEEECCCCCCCChHHccccc------c--cCcccccC-CCCccccCCCCCCCChHHHHHHHHhccC--
Confidence 78888999999999999999999999987521 1 11111100 0000001346788999999999999873
Q ss_pred CCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHc------CCeEEEEeccCCCCCCccCHHHHHHH
Q 005334 162 GASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIED------GVNVMSMSIGGGLTDYYRDTVAIGAF 234 (701)
Q Consensus 162 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~------gvdVInlSlG~~~~~~~~d~i~~a~~ 234 (701)
.||||+|+|+.+|+++..| ++.+++++||+|+++. +++|||||||+. +...+..++.
T Consensus 87 ------------~GVAP~A~L~~vkVl~~~G~g~~s~ii~ai~~a~~~~~~~~~g~~VINmSlGg~----~s~~l~~Ai~ 150 (546)
T 2qtw_B 87 ------------AGVAKGASMRSLRVLNCQGKGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGG----YSRVLNAACQ 150 (546)
T ss_dssp ------------TCSSTTCEEEEEECSCTTSEEEHHHHHHHHHHHHHHHHHSCCSCEEEEECEEEE----CCHHHHHHHH
T ss_pred ------------CCcCCCCEEEEEEEECCCCCcCHHHHHHHHHHHHHhhhhccCCCeEEEecCCCC----CcHHHHHHHH
Confidence 6999999999999998776 6788999999999984 899999999974 3456777888
Q ss_pred HHHHCCCEEEEecCCCCCCCC-ccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCCC
Q 005334 235 TAMAQGIFVSCSAGNGGPYAN-SISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANVS 313 (701)
Q Consensus 235 ~a~~~Gi~vV~AAGN~G~~~~-~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~~ 313 (701)
+|.++|++||+||||+|.... ..+...|++|+|||++.+...
T Consensus 151 ~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g~~------------------------------------- 193 (546)
T 2qtw_B 151 RLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQDQP------------------------------------- 193 (546)
T ss_dssp HHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTSCB-------------------------------------
T ss_pred HHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCCCc-------------------------------------
Confidence 899999999999999997643 346778999999985321100
Q ss_pred CCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHHH
Q 005334 314 STSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAIK 393 (701)
Q Consensus 314 ~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l~ 393 (701)
T Consensus 194 -------------------------------------------------------------------------------- 193 (546)
T 2qtw_B 194 -------------------------------------------------------------------------------- 193 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEee
Q 005334 394 NYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNII 473 (701)
Q Consensus 394 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~ 473 (701)
...-..||++|+ ||||+|||++|+++++... ..|..+
T Consensus 194 ------------------------a~~s~~fSn~G~--------~vDI~APG~~I~St~~~~~-----------~~y~~~ 230 (546)
T 2qtw_B 194 ------------------------VTLGTLGTNFGR--------CVDLFAPGEDIIGASSDCS-----------TCFVSQ 230 (546)
T ss_dssp ------------------------CEETTEECCBST--------TCCEEEECSSEEEECTTST-----------TCEEEE
T ss_pred ------------------------ccccCCcCCCCC--------cceEEecCccEEeeccCCC-----------CcEeee
Confidence 000012889987 4599999999999987642 268999
Q ss_pred ccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 005334 474 SGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTN 514 (701)
Q Consensus 474 sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 514 (701)
+|||||||||||++|||+|++|+|+|++||++|++||.+..
T Consensus 231 SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~~ 271 (546)
T 2qtw_B 231 SGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKDV 271 (546)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEESC
T ss_pred CcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999998653
No 33
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=7.4e-45 Score=379.36 Aligned_cols=228 Identities=34% Similarity=0.456 Sum_probs=192.1
Q ss_pred CCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccccC
Q 005334 82 LFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSVVN 161 (701)
Q Consensus 82 ~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~~~ 161 (701)
+|... +|+||+|||||||||++||+|.++. +.+. +. .....|..||||||||||+|+.
T Consensus 25 ~~~~~-~G~gv~VaViDtGvd~~h~~l~~~~-------~~~~--~~----------~~~~~d~~gHGT~vAgii~~~~-- 82 (279)
T 3f7m_A 25 AYDTS-AGAGACVYVIDTGVEDTHPDFEGRA-------KQIK--SY----------ASTARDGHGHGTHCAGTIGSKT-- 82 (279)
T ss_dssp EECTT-TTTTEEEEEEESCCCTTCGGGTTCE-------EEEE--EC----------SSSSSCSSSHHHHHHHHHHCTT--
T ss_pred eecCC-CCCCCEEEEEcCCCCCCChhhcccc-------cccc--CC----------CCCCCCCCCcHHHHHHHHhcCc--
Confidence 56655 8999999999999999999998752 1111 11 0123388999999999999862
Q ss_pred CCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHHHHHHHcC-------CeEEEEeccCCCCCCccCHHHHHH
Q 005334 162 GASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGMDKAIEDG-------VNVMSMSIGGGLTDYYRDTVAIGA 233 (701)
Q Consensus 162 ~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai~~ai~~g-------vdVInlSlG~~~~~~~~d~i~~a~ 233 (701)
.||||+|+|+.+|+++..+ +...+++++|+++++++ ++|||||||.. +.+.+..++
T Consensus 83 ------------~GvAp~a~l~~~~v~~~~~~~~~~~~~~ai~~~~~~~~~~~~~~~~Vin~S~g~~----~~~~~~~a~ 146 (279)
T 3f7m_A 83 ------------WGVAKKVSIFGVKVLDDSGSGSLSNIIAGMDFVASDRQSRNCPRRTVASMSLGGG----YSAALNQAA 146 (279)
T ss_dssp ------------TCSSTTCEEEEEECSCTTSCCCHHHHHHHHHHHHHHGGGSCCTTEEEEEECCCEE----CCHHHHHHH
T ss_pred ------------cccCCCCEEEEEEeeCCCCCcCHHHHHHHHHHHHhccccccCCCCeEEEeCCCcC----ccHHHHHHH
Confidence 7999999999999998776 78889999999999986 99999999974 456777888
Q ss_pred HHHHHCCCEEEEecCCCCCCCCc-cccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEcCCC
Q 005334 234 FTAMAQGIFVSCSAGNGGPYANS-ISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDAANV 312 (701)
Q Consensus 234 ~~a~~~Gi~vV~AAGN~G~~~~~-~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~~~~ 312 (701)
.++.++|++||+||||+|..... .+...|++|+|||.+
T Consensus 147 ~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~----------------------------------------- 185 (279)
T 3f7m_A 147 ARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATD----------------------------------------- 185 (279)
T ss_dssp HHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEEC-----------------------------------------
T ss_pred HHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecC-----------------------------------------
Confidence 89999999999999999976443 366788999999832
Q ss_pred CCCcCCCccCCCCCCCCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhhHHHH
Q 005334 313 SSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKAGDAI 392 (701)
Q Consensus 313 ~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~g~~l 392 (701)
T Consensus 186 -------------------------------------------------------------------------------- 185 (279)
T 3f7m_A 186 -------------------------------------------------------------------------------- 185 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCCCCCCCCCCCcccceeEe
Q 005334 393 KNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGAVGPTGLESDKRHVSFNI 472 (701)
Q Consensus 393 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~ 472 (701)
..+.++.||++||.. ||+|||++|+++++.+ .|..
T Consensus 186 ------------------------~~~~~~~~S~~g~~~--------di~ApG~~i~s~~~~~-------------~~~~ 220 (279)
T 3f7m_A 186 ------------------------SNDVRSTFSNYGRVV--------DIFAPGTSITSTWIGG-------------RTNT 220 (279)
T ss_dssp ------------------------TTSBBCTTCCBSTTC--------CEEEECSSEEEECGGG-------------CEEE
T ss_pred ------------------------CCCCCCCCCCCCCCC--------eEEECCCCeEeecCCC-------------CEEE
Confidence 112678899999965 9999999999998764 6899
Q ss_pred eccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCC
Q 005334 473 ISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTN 514 (701)
Q Consensus 473 ~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~ 514 (701)
++|||||||||||++|||+|++|+ ++++||.+|++||++..
T Consensus 221 ~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~~ 261 (279)
T 3f7m_A 221 ISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKNV 261 (279)
T ss_dssp ECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEESC
T ss_pred eeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhccccc
Confidence 999999999999999999999999 99999999999998764
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=4.4e-42 Score=396.13 Aligned_cols=316 Identities=22% Similarity=0.202 Sum_probs=198.4
Q ss_pred CCCCCCCCCCCCCEEEEEccCCCCCCCCccCCCCCCCCCccceeeEecccCCccCCCCCCCCCCCCCChhHHHHhhcccc
Q 005334 80 ETLFPTSEVQSEVIVGVLDTGVWPEIKSFDDTGMGPVPRGWKGVWYEEAVGPIDETAESKSPRDDDGHGTHTSTTAAGSV 159 (701)
Q Consensus 80 ~~~~~~~~~G~gVvVgVIDtGId~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~D~~gHGThvAgiaAG~~ 159 (701)
..+|..+++|+||+|||||||||++||+|.++... +. ++.. +...+.....|.+||||||||||||..
T Consensus 60 ~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n~~~-------~~-~~~~----~~~~dp~p~~~~~gHGThVAGiIAa~~ 127 (600)
T 3hjr_A 60 WWAHRTGVLGQGVNVAVVDDGLAIAHPDLADNVRP-------GS-KNVV----TGSDDPTPTDPDTAHGTSVSGIIAAVD 127 (600)
T ss_dssp HHHHHHTCSCTTCEEEEESSCCCTTCTTTGGGBCS-------CC-BCTT----TSSSCCCCCSTTCCHHHHHHHHHHCCS
T ss_pred HHHHHcCCCCCCeEEEEEcCCCCCCChhHhhcccc-------Cc-ceee----cCCCCCCCCCCCCChHHHHHHHHhEeC
Confidence 45899999999999999999999999999875211 10 1111 111122223467899999999999862
Q ss_pred cCCCcccccCCCceeeecCCCeEEEEEeecCCC-CChHHHHHHH-HHHHHcCCeEEEEeccCCC-CCCccCH-----HHH
Q 005334 160 VNGASLFGFASGTARGMAAQARVATYKVCWLAG-CFGSDILAGM-DKAIEDGVNVMSMSIGGGL-TDYYRDT-----VAI 231 (701)
Q Consensus 160 ~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g-~~~~~i~~ai-~~ai~~gvdVInlSlG~~~-~~~~~d~-----i~~ 231 (701)
+ ..| +.||||+|+|+.+|++++.+ +..++++.|+ +++..++++|||+|||... .+...+. +..
T Consensus 128 -n---~~g-----~~GVAp~A~l~~~rvl~~~~~~~~~~~~~a~~~~~~~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~ 198 (600)
T 3hjr_A 128 -N---AIG-----TKGIAPRAQLQGFNLLDDNSQQLQKDWLYALGDSNASRDNRVFNQSYGMSVVDPRSANSLDQSQLDR 198 (600)
T ss_dssp -S---SSS-----CCCSSTTCEEEEECTTSTTCCCCHHHHHHHTTSSHHHHTCSEEEECCCCCCSSCCCSCSHHHHHHHH
T ss_pred -C---CCC-----cEEeCCCCEEEEEEeecCCCCccHHHHHHHhhhhhhhcCCCEEecccCccccCCccCCcchhhhHHH
Confidence 1 122 38999999999999998776 6677777766 6778899999999999753 1111111 222
Q ss_pred HHHHH--HHCCCEEEEecCCCCCCCCccccCCCceEEecCCccCceeeeEEEcCCCcEEEEEEeecCCCCCCceeeEEEc
Q 005334 232 GAFTA--MAQGIFVSCSAGNGGPYANSISNVAPWITTVGAGTLDRNFPTYVSLGNGKSFSGVSLYSRRPLSGSMVPIVDA 309 (701)
Q Consensus 232 a~~~a--~~~Gi~vV~AAGN~G~~~~~~~~~ap~vitVgAst~~~~~~~~~~l~~g~~~~g~s~~~~~~~~~~~~~l~~~ 309 (701)
++..+ ..+|+++|+||||.+....... .....+ +++.
T Consensus 199 ~~~~~~~~~~g~~~v~AaGNg~~~~~~~~-----~~~~~~-------------g~~~----------------------- 237 (600)
T 3hjr_A 199 LFEQQTLKAQGAAYIKAAGNGFNKIAAGG-----YVLNRT-------------GNGP----------------------- 237 (600)
T ss_dssp HHHHHHHSTTCCEEEEECCSCSSEEEETT-----EEEEEE-------------SSCC-----------------------
T ss_pred HHHHhhhccCCcEEEEeccCccccccccc-----cccccC-------------CCCC-----------------------
Confidence 22222 2579999999999864211000 000000 0000
Q ss_pred CCCCCCcCCCccCCCCCCC-CCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCccccccccccceEEechhh
Q 005334 310 ANVSSTSSGNLCMTGSLIP-AKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEELVADAQLLPSANVGEKA 388 (701)
Q Consensus 310 ~~~~~~~~~~~C~~~~~~~-~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~~~~~~~~~p~~~i~~~~ 388 (701)
......|. +++ ......|.+.
T Consensus 238 -----~~~~~~~~---~d~~~~~~~~IsVg-------------------------------------------------- 259 (600)
T 3hjr_A 238 -----KLPFENSN---LDPSNSNFWNLVVS-------------------------------------------------- 259 (600)
T ss_dssp -----CCCSSBTT---SSGGGGSSSEEEEE--------------------------------------------------
T ss_pred -----CCCccccc---ccCccccCcceEEe--------------------------------------------------
Confidence 00000110 000 0000011110
Q ss_pred HHHHHHhHhcCCCCeEEEEecceeecccCCCceecccCCCCCCCCCCCCCCcEEecCCcE-------E-ecccCCCCCC-
Q 005334 389 GDAIKNYISSDPGPMATIISRGTQLGIQPSPVVAAFSSRGPNPITPEILKPDLIAPGVNI-------L-AGWTGAVGPT- 459 (701)
Q Consensus 389 g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I-------~-sa~~~~~~~~- 459 (701)
.....+.++.||++|+.. +++|||..+ . ...++.....
T Consensus 260 -------------------------A~~~~g~~a~yS~~G~~v--------~~~apg~~~~~~~~~~vt~~~pG~~~~~~ 306 (600)
T 3hjr_A 260 -------------------------ALNADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYN 306 (600)
T ss_dssp -------------------------EECTTSSBCTTCCBCTTC--------CEEEECCSCSSSSCCEEEECCSSTTSSSS
T ss_pred -------------------------eecCCCCEeecccCCcce--------eeccCCCCCCCCCcceeeecCCCcccccc
Confidence 013345788999999987 899998763 2 2222110000
Q ss_pred ------------CCCCCcccceeEeeccccchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhccccCCCCCcccc------
Q 005334 460 ------------GLESDKRHVSFNIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYSTNGNGKTLL------ 521 (701)
Q Consensus 460 ------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~~~~~g~~~~------ 521 (701)
..........|..++|||||||||||++|||+|+||+||++|||++|++||++++....|+.
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~ 386 (600)
T 3hjr_A 307 RTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSS 386 (600)
T ss_dssp STTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECT
T ss_pred ccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCCCccccccccc
Confidence 00111223468899999999999999999999999999999999999999999986655421
Q ss_pred --------------cCCCCCCCCCCCCCccccCccccCCCCc
Q 005334 522 --------------DISTGQPSTPFDFGAGHVDPVAALDPGL 549 (701)
Q Consensus 522 --------------~~~~~~~~~~~~~G~G~vn~~~A~~~gl 549 (701)
.+..+..+ ...||||+||+.+|++.+.
T Consensus 387 ~~~~~~~~~~~~w~~N~aG~~~-s~~yGfG~vDA~~aV~~A~ 427 (600)
T 3hjr_A 387 TGKVRDVKGLEGWERNAAGMWF-SPTYGFGLIDVNKALELAA 427 (600)
T ss_dssp TSCEEEEEEECCSEECTTSCEE-BTTTBTCBCCHHHHHHHHT
T ss_pred ccccccccccCCcccccCCceE-ccccCCceecHHHHHHHhh
Confidence 11112222 3489999999999987443
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.90 E-value=2.2e-24 Score=243.18 Aligned_cols=96 Identities=22% Similarity=0.349 Sum_probs=77.5
Q ss_pred eeeecCCCeEEEEEeecCCCCChHHHHHHHHHHHH---cCCeEEEEeccCCCCCC---ccCHHHHHHHHHHHCCCEEEEe
Q 005334 173 ARGMAAQARVATYKVCWLAGCFGSDILAGMDKAIE---DGVNVMSMSIGGGLTDY---YRDTVAIGAFTAMAQGIFVSCS 246 (701)
Q Consensus 173 ~~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~---~gvdVInlSlG~~~~~~---~~d~i~~a~~~a~~~Gi~vV~A 246 (701)
+.||||+|+|+.|++. ....+++++|++|++ ++++|||+|||...... +...+..++.+|..+||+||+|
T Consensus 274 ~~gvAp~a~i~~~~~~----~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi~vv~A 349 (552)
T 1t1e_A 274 AGALAPGAKIAVYFAP----NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGVTVLAA 349 (552)
T ss_dssp HHHHCTTSEEEEEECC----SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhccCCCCeEEEEEcC----CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4799999999999974 356789999999998 79999999999864221 2245666677888999999999
Q ss_pred cCCCCCCC--------CccccCCCceEEecCCcc
Q 005334 247 AGNGGPYA--------NSISNVAPWITTVGAGTL 272 (701)
Q Consensus 247 AGN~G~~~--------~~~~~~ap~vitVgAst~ 272 (701)
|||+|... ...+..+|||++|||++.
T Consensus 350 sGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 350 AGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp CCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred cCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 99999643 345678999999999753
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.86 E-value=4.6e-22 Score=213.86 Aligned_cols=99 Identities=21% Similarity=0.212 Sum_probs=80.6
Q ss_pred eeecCCCeEEEEEeecCCCCChHHHHHHHHHHHH-cCCeEEEEeccCCCC----CCccCHHHHHHHHHHHCCCEEEEecC
Q 005334 174 RGMAAQARVATYKVCWLAGCFGSDILAGMDKAIE-DGVNVMSMSIGGGLT----DYYRDTVAIGAFTAMAQGIFVSCSAG 248 (701)
Q Consensus 174 ~GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai~-~gvdVInlSlG~~~~----~~~~d~i~~a~~~a~~~Gi~vV~AAG 248 (701)
..+||+++++.|++.+..++..++++++|+||++ ++++|||||||.... ..+...+..++.+|..+||+||+|||
T Consensus 90 g~~aP~a~~~~~~~~~~~~~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv~AsG 169 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSASGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFSVSSG 169 (372)
T ss_dssp HHTTSCEEEEEEEEECTTSSTTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred hhcCCCCcEEEEEeCCCCCcccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEEEEEC
Confidence 4578999999999987655778899999999998 899999999998531 12334667777788899999999999
Q ss_pred CCCCCCC-------------ccccCCCceEEecCCcc
Q 005334 249 NGGPYAN-------------SISNVAPWITTVGAGTL 272 (701)
Q Consensus 249 N~G~~~~-------------~~~~~ap~vitVgAst~ 272 (701)
|+|...+ ..+..+|||++||+++.
T Consensus 170 d~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~ 206 (372)
T 1ga6_A 170 DEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTL 206 (372)
T ss_dssp SBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEE
T ss_pred CCCCccccccCccCCccCCcCCCCCCCCeEEEEeeec
Confidence 9997532 45568899999999754
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=99.02 E-value=3.4e-10 Score=126.74 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=61.8
Q ss_pred eecCCCeEEEEEeecCCCCChHHHHHHHHHHH--HcCCeEEEEeccCCCCC---CccCHHHHHHHHHHHCCCEEEEecCC
Q 005334 175 GMAAQARVATYKVCWLAGCFGSDILAGMDKAI--EDGVNVMSMSIGGGLTD---YYRDTVAIGAFTAMAQGIFVSCSAGN 249 (701)
Q Consensus 175 GvAP~A~l~~~kv~~~~g~~~~~i~~ai~~ai--~~gvdVInlSlG~~~~~---~~~d~i~~a~~~a~~~Gi~vV~AAGN 249 (701)
++++...++.|-.... ......++..+++.. .+-++|||+|||..... .+...+...+.++..+||.|++|+||
T Consensus 263 a~~~~i~~~~~~~~g~-~~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv~~ASGD 341 (544)
T 3edy_A 263 SAGANISTWVYSSPGR-HEGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTLLFASGD 341 (544)
T ss_dssp HHSTTSEEEEECCCSC-CTTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEEEEECCS
T ss_pred ccCCCceEEEEecCCc-ccccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEEEEecCC
Confidence 4445555555533211 112234555444433 24688999999986422 22344555666788999999999999
Q ss_pred CCCCC----------CccccCCCceEEecCCcc
Q 005334 250 GGPYA----------NSISNVAPWITTVGAGTL 272 (701)
Q Consensus 250 ~G~~~----------~~~~~~ap~vitVgAst~ 272 (701)
+|... ...+..+|||++||+++.
T Consensus 342 ~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 342 SGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp STTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred CCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99642 245678999999999753
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.65 E-value=1.6e-08 Score=89.44 Aligned_cols=61 Identities=10% Similarity=0.101 Sum_probs=54.9
Q ss_pred cccHHHHHHHhhccccccccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceecc
Q 005334 5 FNDHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYEL 65 (701)
Q Consensus 5 ~~~h~~~~~~~l~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 65 (701)
+.+|++|+.+++.+.....+++|+|++.|+||+++|+++++++|+++|+|.+|++|+.++.
T Consensus 53 ~~~h~~~l~s~~~~~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~VE~D~~v~~ 113 (114)
T 2w2n_P 53 SERTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 113 (114)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHhhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccEEEeCceEec
Confidence 5679999999987743467999999999999999999999999999999999999998764
No 39
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.54 E-value=3.8e-07 Score=87.60 Aligned_cols=94 Identities=17% Similarity=0.154 Sum_probs=73.9
Q ss_pred CCCccCCCCCCCC-------CccceEEEEecCC-CchhhhhHHHhHcCceEEEEeecCCCCcc---c-cccccccceEEe
Q 005334 317 SGNLCMTGSLIPA-------KVAGKIVVCDRGG-NSRVEKGVEVKDAGGVGMILTNTDSYGEE---L-VADAQLLPSANV 384 (701)
Q Consensus 317 ~~~~C~~~~~~~~-------~~~gkiv~~~~g~-~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~---~-~~~~~~~p~~~i 384 (701)
....|.+...... ..+|||+|++||. |+|.+|..+++++||.++|++|+...+.. + ......||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 4578987664322 2578999999999 99999999999999999999997532211 1 123357999999
Q ss_pred chhhHHHHHHhHhcCCCCeEEEEecc
Q 005334 385 GEKAGDAIKNYISSDPGPMATIISRG 410 (701)
Q Consensus 385 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 410 (701)
+..+|+.|++++..+...+.+|.+..
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999887777776643
No 40
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.28 E-value=9.2e-07 Score=72.95 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=43.7
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceeccCCCC
Q 005334 22 SAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYELHTTR 69 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~~~~~ 69 (701)
..+++|+|++ |+||+++++++++++|+++|+|.+||++..++++++.
T Consensus 33 g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 33 GGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAYVEEDKLYRALSAT 79 (80)
T ss_dssp TCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEEEEECCEEEECCC-
T ss_pred CCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccEEEeCcEEEEeeec
Confidence 5689999998 9999999999999999999999999999999988765
No 41
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.10 E-value=2.2e-06 Score=76.70 Aligned_cols=59 Identities=10% Similarity=0.115 Sum_probs=47.7
Q ss_pred cHHHHHHHhhccccccccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceecc
Q 005334 7 DHFEWYDSSLKSVSASAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYEL 65 (701)
Q Consensus 7 ~h~~~~~~~l~~~~~~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~~ 65 (701)
.|.+++.++++......+++|+|++.||||+++|+++++++|+++|+|.+|++++.++.
T Consensus 65 ~~~~~l~~~~~~r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~VE~D~~v~a 123 (124)
T 2qtw_A 65 RTARRLQAQAARRGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEEDSSVFA 123 (124)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhhcccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEEEeCceEec
Confidence 45555555443322356899999999999999999999999999999999999988764
No 42
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=97.57 E-value=0.0001 Score=59.86 Aligned_cols=44 Identities=18% Similarity=0.197 Sum_probs=39.6
Q ss_pred cccEEEEec-ceeeEEEEEeCHHHHHHhhcC--CCeEEEEeCceecc
Q 005334 22 SAAMLYTYK-NVIHGFSTRLTAKEAESLQKQ--PGIVSVLPEVRYEL 65 (701)
Q Consensus 22 ~~~~~~~y~-~~~ng~s~~l~~~~~~~L~~~--p~V~~V~~~~~~~~ 65 (701)
..++.|.|+ .+|+||+++++++++++|+++ |.|.+||++..+++
T Consensus 29 gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~VE~D~~v~~ 75 (76)
T 1v5i_B 29 GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDSIEEDHVAHA 75 (76)
T ss_dssp TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEEEEECCEEEC
T ss_pred CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcEEcCCcEEeC
Confidence 357899994 799999999999999999999 88999999998764
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=96.60 E-value=0.0022 Score=50.19 Aligned_cols=42 Identities=21% Similarity=0.375 Sum_probs=39.4
Q ss_pred cccEEEEecceeeEEEEEeCHHHHHHhhcCCCeEEEEeCceec
Q 005334 22 SAAMLYTYKNVIHGFSTRLTAKEAESLQKQPGIVSVLPEVRYE 64 (701)
Q Consensus 22 ~~~~~~~y~~~~ng~s~~l~~~~~~~L~~~p~V~~V~~~~~~~ 64 (701)
+.+++|+|. .+++++++|+++.++.|+++|+|++|++|...+
T Consensus 22 gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~ 63 (65)
T 2z30_B 22 GGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAV 63 (65)
T ss_dssp TCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEE
T ss_pred CCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEE
Confidence 679999998 899999999999999999999999999998765
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=95.90 E-value=0.035 Score=60.23 Aligned_cols=70 Identities=23% Similarity=0.343 Sum_probs=57.7
Q ss_pred CCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcc--cc-ccccccceEEechhhHHHHHHhHh
Q 005334 328 PAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEE--LV-ADAQLLPSANVGEKAGDAIKNYIS 397 (701)
Q Consensus 328 ~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~--~~-~~~~~~p~~~i~~~~g~~l~~~~~ 397 (701)
..+++||||++.++.|.+..|..+++++||.|+|++++...... +. .....+|.+.++..+++.|+..+.
T Consensus 110 ~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 110 GKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred CCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 34799999999999999999999999999999999987632211 11 134678999999999999999984
No 45
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.27 E-value=0.063 Score=58.65 Aligned_cols=102 Identities=16% Similarity=0.233 Sum_probs=69.1
Q ss_pred CceeeEEEcCCCCCCcCCCccCCCCCCCCCccceEEEEecCCCc---------hhhh----hHHHhHcCceEEEEeecCC
Q 005334 301 GSMVPIVDAANVSSTSSGNLCMTGSLIPAKVAGKIVVCDRGGNS---------RVEK----GVEVKDAGGVGMILTNTDS 367 (701)
Q Consensus 301 ~~~~~l~~~~~~~~~~~~~~C~~~~~~~~~~~gkiv~~~~g~~~---------~~~~----~~~~~~~Ga~g~i~~n~~~ 367 (701)
....++++..+. ..|.. ..+.+++|||||+.++.|. +..+ ..++.++||+|+|+++...
T Consensus 105 ~vta~lV~v~~~------~~~~~--~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~ 176 (444)
T 3iib_A 105 GLSATIVRFDTL------QDLQN--AEAGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGT 176 (444)
T ss_dssp CEEEEEEEESSH------HHHHT--SCTTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCS
T ss_pred CeEEEEEecCCH------HHHhh--ccccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCC
Confidence 346778876421 12322 2356899999999998874 3333 3468999999999998643
Q ss_pred CCc--------cccccccccceEEechhhHHHHHHhHhcCCCCeEEEEecc
Q 005334 368 YGE--------ELVADAQLLPSANVGEKAGDAIKNYISSDPGPMATIISRG 410 (701)
Q Consensus 368 ~~~--------~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~ 410 (701)
... ........+|++.|+..+++.|+..+..+...+.++....
T Consensus 177 ~~~~~~~tg~~~~~~~~~~IP~~~Is~~da~~L~~~l~~g~~~~v~l~~~~ 227 (444)
T 3iib_A 177 DHDRMAHTGMMRYEEGVTAIPAAAISNPDADLINAMLKRDKEVVISLELGS 227 (444)
T ss_dssp CCSSCCCCCBCCCCTTSCCCCEEEECHHHHHHHHHHHTTTCCCEEEEEEEE
T ss_pred cccccccCCccccCCCCCCCCeEEecHHHHHHHHHHHhCCCCeEEEEEEee
Confidence 211 1111245799999999999999999987765555555443
No 46
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.05 E-value=0.042 Score=62.60 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=55.4
Q ss_pred CCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCCCcc------------------cc----------------c
Q 005334 329 AKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSYGEE------------------LV----------------A 374 (701)
Q Consensus 329 ~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~~~~------------------~~----------------~ 374 (701)
-+++|||||+.+|.|.+..|..++.++||.|+|++++...... .. .
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 4799999999999999999999999999999999987532100 00 0
Q ss_pred cccccceEEechhhHHHHHHhHh
Q 005334 375 DAQLLPSANVGEKAGDAIKNYIS 397 (701)
Q Consensus 375 ~~~~~p~~~i~~~~g~~l~~~~~ 397 (701)
....||+..|+..+++.|+..+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 12368999999999999988764
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.36 E-value=0.037 Score=63.75 Aligned_cols=71 Identities=23% Similarity=0.342 Sum_probs=56.4
Q ss_pred CCCccceEEEEecCCCchhhhhHHHhHcCceEEEEeecCCC----C---------------------------ccccc--
Q 005334 328 PAKVAGKIVVCDRGGNSRVEKGVEVKDAGGVGMILTNTDSY----G---------------------------EELVA-- 374 (701)
Q Consensus 328 ~~~~~gkiv~~~~g~~~~~~~~~~~~~~Ga~g~i~~n~~~~----~---------------------------~~~~~-- 374 (701)
..+++|||+|+++|.|.+.+|..+++++||+|+|++++..+ + ..+.+
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 35799999999999999999999999999999999985320 0 00000
Q ss_pred ---------------cccccceEEechhhHHHHHHhHhc
Q 005334 375 ---------------DAQLLPSANVGEKAGDAIKNYISS 398 (701)
Q Consensus 375 ---------------~~~~~p~~~i~~~~g~~l~~~~~~ 398 (701)
....||+..|+..+++.|+..+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 124699999999999999998754
No 48
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.14 E-value=0.37 Score=42.34 Aligned_cols=72 Identities=17% Similarity=0.164 Sum_probs=51.4
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCCCCeEEEEEEEE-cCCeEEE
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPSGTTSFARLQWS-DGKHVVG 693 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~-~~~~~v~ 693 (701)
.+.+.+.+++|+|+... |+.... + -.+|+|....+ ++|++..++|+|.+.. ...+.+.|... ++...+.
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~~---~--~F~i~P~~g~L-~pg~~~~i~V~F~P~~---~g~~~~~l~v~~~~g~~~~ 111 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKTC---R--PFSIEPAIGTL-NVGESMQLEVEFEPQS---VGDHSGRLIVCYDTGEKVF 111 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEECC---T--TEEEESSEEEE-CTTCEEEEEEEECCSS---SBCCCCBCEEEESSSCEEC
T ss_pred CeEEEEEEEEECCCCCEEEEEecC---C--CeEEECCcCEE-CCCCEEEEEEEEEcCC---CccEEEEEEEEECCCCEEE
Confidence 56788889999999877 876643 2 36678999999 6899999999998862 12345555554 5555554
Q ss_pred eeE
Q 005334 694 SPI 696 (701)
Q Consensus 694 ~P~ 696 (701)
+++
T Consensus 112 v~L 114 (122)
T 2ys4_A 112 VSL 114 (122)
T ss_dssp CEE
T ss_pred EEE
Confidence 443
No 49
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=88.29 E-value=0.21 Score=60.65 Aligned_cols=25 Identities=20% Similarity=0.415 Sum_probs=23.2
Q ss_pred CCCCCCCEEEEEccCCCCCCCCccC
Q 005334 86 SEVQSEVIVGVLDTGVWPEIKSFDD 110 (701)
Q Consensus 86 ~~~G~gVvVgVIDtGId~~Hp~f~~ 110 (701)
.+.|+||+|||+||||||.+|-|.-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 6789999999999999999999974
No 50
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=81.61 E-value=0.94 Score=49.19 Aligned_cols=32 Identities=28% Similarity=0.270 Sum_probs=26.8
Q ss_pred cCCCceecccCCCCCCCCCCCCCCcEEecCCcEEecccCC
Q 005334 416 QPSPVVAAFSSRGPNPITPEILKPDLIAPGVNILAGWTGA 455 (701)
Q Consensus 416 ~~~~~~a~fSS~GP~~~~~~~lKPDI~APG~~I~sa~~~~ 455 (701)
...+.++.||++||.. ||+|||++|+++++.+
T Consensus 181 ~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 181 DSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp CTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred CCCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 3456789999999865 9999999999998743
No 51
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=71.19 E-value=11 Score=33.10 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=37.6
Q ss_pred eeEEEEEEEeeCCCCCe--EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEe
Q 005334 616 STVKYTRTLTNVGTPTT--YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTA 670 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~--y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~ 670 (701)
...+++.||+|.|...+ |++.+. . .|-.+.-. ...+ ++|++++++++...
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~ly-v-ng~~v~t~--~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVY-I-NGTLYKNW--TVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEE-E-TTEEEEEE--EEEE-CTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEE-E-CCEEEeeE--Eecc-CCCCeEEEEEEEEc
Confidence 68999999999999875 999876 3 56555433 3356 68999988877754
No 52
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.98 E-value=4.3 Score=34.48 Aligned_cols=67 Identities=12% Similarity=0.153 Sum_probs=46.0
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCCCCeEEEEEEEE
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPSGTTSFARLQWS 686 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~ 686 (701)
...+.+.+++|.|+... |+......+.+...+++|..=.+ ++|++++++|+|.+.. .+.| .=.|.+.
T Consensus 26 ~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~~~--~g~f-~~~i~v~ 93 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSSII--LGNF-EEEFLVN 93 (112)
T ss_dssp CCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECCCC--CEEE-EEEECEE
T ss_pred CEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEECCC--cceE-EEEEEEE
Confidence 35677789999999887 88732101223347778999888 6899999999998862 2333 3345555
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=64.56 E-value=30 Score=29.65 Aligned_cols=54 Identities=15% Similarity=0.158 Sum_probs=43.0
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeee
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASS 672 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~ 672 (701)
-.-.++..+.|...... |+++++ ..+|+++. .|..+.+ ++++..++.|.+....
T Consensus 31 I~N~Ytlki~Nkt~~~~~~~l~v~-g~~~l~~~-g~~~i~v-~~g~~~~~~v~v~~~~ 85 (118)
T 2r39_A 31 VENTYTLKVINKTQQVQEYNLDVK-GLNDVSWY-GKQTIQV-EPGEVLNLPMSLGADP 85 (118)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEE-SCSSCEEE-SCCEEEE-CTTCEEEEEEEEEECG
T ss_pred EEEEEEEEEEECCCCCEEEEEEEe-CCcccEEe-CCCcEEE-CCCCEEEEEEEEEECh
Confidence 46778889999988888 999999 66775543 2556888 7899999999998864
No 54
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=56.82 E-value=47 Score=29.44 Aligned_cols=82 Identities=12% Similarity=-0.031 Sum_probs=57.6
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCC-----ceEEEEeeCeEEEeecceeEEEEEEEEeeeC------CCCCeEEEEE
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQST-----SVKILVEPESLSFSRQYEKKSYVVTFTASSM------PSGTTSFARL 683 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~-----g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~------~~~~~~~G~~ 683 (701)
...+-+.|++|.|.-.. |+.... +. .--++|+|..=++ .+|++..++|++..... ....-.+--|
T Consensus 43 ~~~~~~l~I~Ntg~vpa~F~f~~~--~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g~~~l~diL 119 (140)
T 3qbt_B 43 QLQKEKFQISNNGQVPCHFSFIPK--LNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDIL 119 (140)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECC--TTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHSSSCSCEEE
T ss_pred eeeeeEEEEEcCCccceEEEEecC--CCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccchhhhheeE
Confidence 34566779999999888 988742 21 1236678999888 79999999999986421 0112346667
Q ss_pred EEE-cCCeEEEeeEEEEe
Q 005334 684 QWS-DGKHVVGSPIAFSW 700 (701)
Q Consensus 684 ~~~-~~~~~v~~P~~v~~ 700 (701)
++. +++....+|+...|
T Consensus 120 vL~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 120 VLHLDRGKDYFLTISGNY 137 (140)
T ss_dssp EEEETTSCEEEEEEEEEE
T ss_pred EEEeecCCcEEEEEeccc
Confidence 777 77777888887665
No 55
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=51.25 E-value=80 Score=30.15 Aligned_cols=66 Identities=11% Similarity=-0.018 Sum_probs=44.9
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCCCCeEEEEEEEE
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPSGTTSFARLQWS 686 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~~~~~~G~~~~~ 686 (701)
...+.+.+++|.|+..- ++.. . .|+-+++...|..| ++|++.+++|+++......-....+.|+..
T Consensus 19 ~~~~~~~~i~N~g~~pl~i~~~-~-~p~~~~~~~~~~~I---~PG~~g~I~vt~~~~~~~~~G~~~~~i~v~ 85 (220)
T 2qsv_A 19 DEGVVRLVVNNTDESDLQVAVV-S-LPSFVSLDDRAFRL---QAREPRELNLSLAVPRNMPPGMKDEPLVLE 85 (220)
T ss_dssp CCCEEEEEEEECSSSCEEEEEE-E-CCTTEECSCCEEEE---CSSSCEEEEEEECCCTTCCSEEEEEEEEEE
T ss_pred CcceEEEEEEeCCCCceEEEec-c-CCCceEeeeCccee---CCCCceEEEEEEcchhcccCCceeeEEEEE
Confidence 34566778999998765 5542 3 47776665555554 789999999999876433334456767776
No 56
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=43.74 E-value=15 Score=27.50 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=27.2
Q ss_pred cchhhhHhHHHHHHHhhCCCCCHHHHHHHHHhcccc
Q 005334 477 SMSCPHVSGLAALLKAAHPEWSPSAIKSALMTTAYS 512 (701)
Q Consensus 477 SmAaP~VAG~aALl~~~~P~~sp~~Ik~~L~~TA~~ 512 (701)
|-..|..--....|++.||+++...|+.+|...-..
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~gd 38 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQRGN 38 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcCCC
Confidence 333444455677899999999999999999876443
No 57
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=42.59 E-value=1.6e+02 Score=32.48 Aligned_cols=54 Identities=13% Similarity=0.010 Sum_probs=38.5
Q ss_pred eeEEEEEEEeeCCCCCe--EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeC
Q 005334 616 STVKYTRTLTNVGTPTT--YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSM 673 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~--y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~ 673 (701)
.+.+++.+|+|-+.... =++++. .|.+.+++. ....+ ++|++.+++++|+....
T Consensus 373 ~~~~~~~~vtn~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~~~~ 428 (601)
T 1w8o_A 373 QQVTVPVAVTNQSGIAVPKPSLQLD-ASPDWQVQG--SVEPL-MPGRQAKGQVTITVPAG 428 (601)
T ss_dssp CEEEEEEEEECCSSSCBSSCEEEEE-CCTTSEEEE--EECCB-CTTCEEEEEEEEECCTT
T ss_pred ceeEEEEEEECCCceeccCceEEEe-cCCCcEEec--ccccc-CCCCceEEEEEEecCCC
Confidence 57899999999654332 255566 899998887 23445 57899888888877643
No 58
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=38.46 E-value=99 Score=26.38 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=19.0
Q ss_pred eeEEEEEEEeeCCCCCe--EEEEEE
Q 005334 616 STVKYTRTLTNVGTPTT--YMVSVS 638 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~--y~~~v~ 638 (701)
...+|+.||+|.|...+ +++.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 58999999999998754 777765
No 59
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=34.19 E-value=2.1e+02 Score=29.59 Aligned_cols=82 Identities=12% Similarity=-0.025 Sum_probs=54.3
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCc-e-E---EEEeeCeEEEeecceeEEEEEEEEeeeCC------CCCeEEEEE
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTS-V-K---ILVEPESLSFSRQYEKKSYVVTFTASSMP------SGTTSFARL 683 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g-~-~---v~v~p~~l~~~~~~~~~~~~vt~~~~~~~------~~~~~~G~~ 683 (701)
...+-+.|++|.|.-.. |+..-. +.+ . . ++|+|..-.+ .+|++.+++|++...... ...-.+--|
T Consensus 46 ~~~~~~l~i~N~g~~pa~f~f~~~--~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~g~~~l~diL 122 (366)
T 3qis_A 46 QLQKEKFQISNNGQVPCHFSFIPK--LNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSGEDKIEDIL 122 (366)
T ss_dssp CCEEEEEEEEECSSSCEEEEEECC--TTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHHTSSCSCEEE
T ss_pred CeEEEEEEEEecCCceEEEEEEeC--CCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhcCccccceEE
Confidence 35667779999999888 888533 322 1 1 7788999888 789999999999876310 012345556
Q ss_pred EEE-cCCeEEEeeEEEEe
Q 005334 684 QWS-DGKHVVGSPIAFSW 700 (701)
Q Consensus 684 ~~~-~~~~~v~~P~~v~~ 700 (701)
++. ++++..-+|+-..|
T Consensus 123 vL~ve~G~d~FI~v~~~~ 140 (366)
T 3qis_A 123 VLHLDRGKDYFLTISGNY 140 (366)
T ss_dssp EEEETTSCEEEEEEEEEE
T ss_pred EEEEeCCCcEEEEecccc
Confidence 666 55555566665443
No 60
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=33.55 E-value=33 Score=39.46 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=43.3
Q ss_pred CCCCCCCceEeeccCCCCCcCCcCcceeEEEEEEEeeCCCCCe-EEEEEEe-cCCceEEEEeeC-------eE-EEeecc
Q 005334 590 LGDVNYPSFSVPFETASGTWGGVGATSTVKYTRTLTNVGTPTT-YMVSVSS-QSTSVKILVEPE-------SL-SFSRQY 659 (701)
Q Consensus 590 ~~~ln~ps~~~~~~~~~~~~~~~~~~~~~~~~rtvtnv~~~~~-y~~~v~~-~p~g~~v~v~p~-------~l-~~~~~~ 659 (701)
..-|-|-+|..+.+.... . ....+++.+|||.|+... -.+.+-. .|.+ .+. .|. ++ .+ ++|
T Consensus 595 G~GLSYTtF~ys~~~~~~----~--~~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~-~~~-~P~k~L~gF~kv~~L-~pG 665 (721)
T 2x41_A 595 GYGLSYTTFEYSDLNVSF----D--GETLRVQYRIENTGGRAGKEVSQVYIKAPKG-KID-KPFQELKAFHKTRLL-NPG 665 (721)
T ss_dssp TCCBCSSCEEEEEEEEEE----C--SSEEEEEEEEEECSSSCBCCEEEEEEECCCS-SSC-CCSCEEEEEEECCCB-CTT
T ss_pred CCCCCcceeEeeceEeec----C--CCeEEEEEEEEECCCCCCcEEeeEEEccCCC-CCC-CchHHhhcccccccC-CCC
Confidence 346777777766542110 0 046899999999998654 4443321 3432 111 121 23 33 789
Q ss_pred eeEEEEEEEEee
Q 005334 660 EKKSYVVTFTAS 671 (701)
Q Consensus 660 ~~~~~~vt~~~~ 671 (701)
|+++++++|+..
T Consensus 666 es~~V~~~l~~~ 677 (721)
T 2x41_A 666 ESEEVVLEIPVR 677 (721)
T ss_dssp CEEEEEEEEEGG
T ss_pred CeEEEEEEECHH
Confidence 999999999865
No 61
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=29.82 E-value=74 Score=37.19 Aligned_cols=44 Identities=23% Similarity=0.166 Sum_probs=33.2
Q ss_pred eeEeeccccchhhhHhHHHHHHHhhCCCCC-HHHHHHHHHhcccc
Q 005334 469 SFNIISGTSMSCPHVSGLAALLKAAHPEWS-PSAIKSALMTTAYS 512 (701)
Q Consensus 469 ~y~~~sGTSmAaP~VAG~aALl~~~~P~~s-p~~Ik~~L~~TA~~ 512 (701)
-...++|..++-|.+--+.|+|...+|.-- ...|-.+|.--..|
T Consensus 618 VVVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 618 VIVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp EEEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred EEEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 456778888888888888888888888765 56777777665554
No 62
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=29.52 E-value=15 Score=31.63 Aligned_cols=32 Identities=19% Similarity=0.169 Sum_probs=22.2
Q ss_pred cCCceEEEEeeCeEEEe-ecceeEEEEEEEEee
Q 005334 640 QSTSVKILVEPESLSFS-RQYEKKSYVVTFTAS 671 (701)
Q Consensus 640 ~p~g~~v~v~p~~l~~~-~~~~~~~~~vt~~~~ 671 (701)
-|.|++++++|+.+++. ..-.+++|.|++...
T Consensus 78 lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~~ 110 (119)
T 2kq1_A 78 FPGDLAVTVEPRMARVQLEERQTVSVPVTVEMI 110 (119)
T ss_dssp SCTTSEEEESCCEEEEEEESCCCCCCCCCCCCC
T ss_pred CCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEEC
Confidence 58888888899887764 334566777666543
No 63
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.12 E-value=1.8e+02 Score=25.00 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=35.9
Q ss_pred eeEEEEEEEeeCCCCC--------e-EEEEEEecCCceEEEE---------eeCeEEEeecceeEEEEEEEE
Q 005334 616 STVKYTRTLTNVGTPT--------T-YMVSVSSQSTSVKILV---------EPESLSFSRQYEKKSYVVTFT 669 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~--------~-y~~~v~~~p~g~~v~v---------~p~~l~~~~~~~~~~~~vt~~ 669 (701)
+...++.+|+|.++.. . |...+. ...|-.|-- .-...++ ++||+++|+.++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~-d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~ 87 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVY-DSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWK 87 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEE-CTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEES
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEE-CCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeC
Confidence 5789999999998742 1 566665 556654441 1224556 7899999999997
No 64
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=28.08 E-value=83 Score=36.02 Aligned_cols=55 Identities=15% Similarity=0.091 Sum_probs=34.3
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEe-cCCce-----EEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSS-QSTSV-----KILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~-~p~g~-----~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
...+++.+|||.|+... -.+.+-. .|.+. +.-.-=+++.+ ++||+++++++|+..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 46899999999998754 4443321 44321 11111123345 789999999999865
No 65
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=26.88 E-value=1.5e+02 Score=25.51 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=40.6
Q ss_pred eeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 616 STVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 616 ~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
..++-..+++|.++..- |+++.. +|.-. .|.|..=.+ .++++..+.|++.+.
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT-~p~~y--~VrP~~G~i-~P~~s~~v~V~~~~~ 79 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTT-APRRY--CVRPNSGVI-DPGSIVTVSVMLQPF 79 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEES-CGGGE--EEESCEEEE-CTTCEEEEEEEECCC
T ss_pred ceEEEEEEEECCCCCeEEEEEECC-CCCce--EEeCCCcEE-CCCCeEEEEEEECcC
Confidence 35677789999988776 999887 88654 566776555 789999999999864
No 66
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=25.69 E-value=1.6e+02 Score=25.16 Aligned_cols=49 Identities=14% Similarity=0.070 Sum_probs=37.7
Q ss_pred EEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 619 KYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 619 ~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
+.+.+++|..+..- |+++.. .|.-. .|.|..=.+ .+|++.++.|++.+.
T Consensus 26 ~~~l~L~N~t~~~vAFKVKtT-~p~~Y--rVrP~~G~I-~Pg~~~~I~I~~q~~ 75 (116)
T 1m1s_A 26 NSTHNITSESDSRLAFKVKSS-NNEHY--RVRPVYGFV-DAKGKSKLDINRLPG 75 (116)
T ss_dssp EEEEEEEECSSSEEEEEEEES-CTTTE--EEECSEEEE-CTTCEEEEEEEECSC
T ss_pred EEEEEEECCCCCeEEEEEEec-CCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 55678899988776 999877 77665 455765444 789999999999875
No 67
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=25.17 E-value=2.9e+02 Score=22.89 Aligned_cols=65 Identities=14% Similarity=0.142 Sum_probs=42.2
Q ss_pred ceEeeccCCCCCcCCcCcceeEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEeeeCCC
Q 005334 597 SFSVPFETASGTWGGVGATSTVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTASSMPS 675 (701)
Q Consensus 597 s~~~~~~~~~~~~~~~~~~~~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~~~~~ 675 (701)
.++|.|.. ..-.++.||+|...+.. |.-... .|. .+++ .+ ...++-.|+|.+...
T Consensus 35 vlsV~F~~-----------~~~~vTItItNe~TG~~VYs~~~s-~p~--~i~I-----dL-nge~sG~Y~IeI~~~---- 90 (101)
T 3sd2_A 35 ILNVSFGR-----------AKDYAIITVTNKATGEIVHSKTYH-NTS--IVMI-----DM-SSCEKGEYTIHIILN---- 90 (101)
T ss_dssp EEEEEESS-----------CCSCEEEEEEETTTCCEEEEEEES-SCS--EEEE-----EC-TTSCSEEEEEEEEET----
T ss_pred EEEEEecc-----------CCCcEEEEEEECCCCcEEEEEecc-CCc--EEEE-----Ec-CCCcCceEEEEEEeC----
Confidence 67777773 24567889999877777 887766 443 2222 23 234578899988764
Q ss_pred CCeEEEEEEE
Q 005334 676 GTTSFARLQW 685 (701)
Q Consensus 676 ~~~~~G~~~~ 685 (701)
..+..|..+.
T Consensus 91 ~~~LtG~F~i 100 (101)
T 3sd2_A 91 DCLLEGTFTV 100 (101)
T ss_dssp TEEEEEEEEE
T ss_pred CcEEEEEEEe
Confidence 4567777653
No 68
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=23.93 E-value=51 Score=29.91 Aligned_cols=31 Identities=26% Similarity=0.261 Sum_probs=26.3
Q ss_pred ccccchhhhHhHHHHHHHhhCCCCCHHHHHHH
Q 005334 474 SGTSMSCPHVSGLAALLKAAHPEWSPSAIKSA 505 (701)
Q Consensus 474 sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~~ 505 (701)
.|-| =|++|-|++|||.+.+-..||++|.+.
T Consensus 80 ~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 80 FGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp EEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred eeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3444 389999999999999999999998764
No 69
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=23.62 E-value=2.5e+02 Score=23.55 Aligned_cols=49 Identities=22% Similarity=0.197 Sum_probs=37.8
Q ss_pred EEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 619 KYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 619 ~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
+-+.+++|..+..- |+++-. +|.-. .|.|..=.+ .+|++.++.|++.+.
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT-~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~~ 67 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSS-NNNEY--RIAPVFGFV-DPSGSKDVVITRTAG 67 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEES-CSSSE--EEECSEEEE-CTTEEEEEEEEECSC
T ss_pred eEEEEEEcCCCCeEEEEEEeC-CCCce--EEcCCceEE-CCCCeEEEEEEeCCC
Confidence 35678899988877 999877 78665 556766444 789999999998774
No 70
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=21.17 E-value=2e+02 Score=25.70 Aligned_cols=51 Identities=20% Similarity=0.152 Sum_probs=39.9
Q ss_pred eEEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 617 TVKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 617 ~~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
.++-..+++|..+..- |+++.. +|.-. .|.|..=.+ .++++.++.|++.+.
T Consensus 36 ~~~~~l~L~N~s~~~VaFKVKTT-~p~~y--~VrP~~GiI-~P~~s~~V~V~lq~~ 87 (152)
T 1wic_A 36 EKKTLIVLTNVTKNIVAFKVRTT-APEKY--RVKPSNSSC-DPGASIDIIVSPHGG 87 (152)
T ss_dssp CCCEEEEEEBCSSSCEEEEEEES-CTTTE--EEESSEEEE-CTTCEEEEEEEECSS
T ss_pred eEEEEEEEEcCCCCeEEEEEECC-CCCce--eecCCCcEE-CCCCeEEEEEEecCc
Confidence 3455788999988776 999887 88755 566877555 789999999999764
No 71
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=20.52 E-value=1.9e+02 Score=24.80 Aligned_cols=50 Identities=18% Similarity=0.236 Sum_probs=39.0
Q ss_pred EEEEEEEeeCCCCCe-EEEEEEecCCceEEEEeeCeEEEeecceeEEEEEEEEee
Q 005334 618 VKYTRTLTNVGTPTT-YMVSVSSQSTSVKILVEPESLSFSRQYEKKSYVVTFTAS 671 (701)
Q Consensus 618 ~~~~rtvtnv~~~~~-y~~~v~~~p~g~~v~v~p~~l~~~~~~~~~~~~vt~~~~ 671 (701)
.+-..+++|.++..- |+++.. +|.-. .|.|..=.+ .++++..+.|++.+.
T Consensus 27 ~~~~l~l~N~s~~~vaFKVKTT-~p~~y--~VrP~~Gii-~P~~s~~v~V~~q~~ 77 (126)
T 1msp_A 27 HTYHIKITNAGGRRIGWAIKTT-NMRRL--SVDPPCGVL-DPKEKVLMAVSCDTF 77 (126)
T ss_dssp CCEEEEEEECSSSCEEEEEEES-CTTTE--EEESCEEEE-CTTCEEEEEEEECCC
T ss_pred eEEEEEEECCCCCeEEEEEEcC-CCCcE--EEECCCeEE-CCCCEEEEEEEecCC
Confidence 445678899988776 999987 88765 566777666 789999999998773
No 72
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=20.13 E-value=49 Score=29.51 Aligned_cols=33 Identities=21% Similarity=0.211 Sum_probs=27.5
Q ss_pred EeeccccchhhhHhHHHHHHHhhCCCCCHHHHHH
Q 005334 471 NIISGTSMSCPHVSGLAALLKAAHPEWSPSAIKS 504 (701)
Q Consensus 471 ~~~sGTSmAaP~VAG~aALl~~~~P~~sp~~Ik~ 504 (701)
-.+.|.| =|++|-|++|||.+.+-..+|++|.+
T Consensus 70 l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 70 IELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp EEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 3445666 38999999999999999999999865
Done!