BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005338
(701 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225444019|ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 979 bits (2531), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/696 (76%), Positives = 579/696 (83%), Gaps = 31/696 (4%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
MED+EG LSFDFEGGLDA PG P IQSD+TAAAAA ++ + + G AP
Sbjct: 1 MEDAEGVLSFDFEGGLDAAPGTAATVAPLIQSDATAAAAAPSSVVSAEP--TPGGAP--- 55
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDC
Sbjct: 56 --------GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDC 107
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
VYKHTNEDIKECNMYKLGFCPNG DCRYRH KLPGPPP++EEV QKIQQ+SS+N+G+ N+
Sbjct: 108 VYKHTNEDIKECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNR 167
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ 240
+Q R ++ QT+KSQ QG NAVN G KSST E+ NV QQQ+ QQ T MQ
Sbjct: 168 FYQNRNPYNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPP--QQQVSQTPMQ 225
Query: 241 NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 300
NLPNGLPNQ N+ A+PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 226 NLPNGLPNQANKTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 285
Query: 301 AENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 360
ENVILIFSVNRTRHFQGCAKMTSKIGG VGGGNWKYAHGTAHYGRNFSVKWLKLCELSF
Sbjct: 286 VENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 345
Query: 361 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLA+LLYLEPDSELMAIS+AAE+KREEEK
Sbjct: 346 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKREEEK 405
Query: 421 AKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGRGMMWPGPMP 476
AKGVNPDNGG+NPDIVPFEDNEEEEEEESEEEE ++LG A+QGRGRGRG+MWP MP
Sbjct: 406 AKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPPHMP 465
Query: 477 LARGARPVPGMRGFPPMMIGADGFSY-GVTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTG 535
LARGARP+P MRGFPP+M+GADGFSY V PDGF MPD+FGV PR F PYGPRFSGDFTG
Sbjct: 466 LARGARPIPSMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTG 525
Query: 536 PG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMG-PAATNPRGGRPVGVPPPFP 593
P GMMFPGR QPG+VFP +G+G MMMGPGR PFMGGMG PAA R GRPVG+PP FP
Sbjct: 526 PASGMMFPGRG-QPGAVFPASGYG-MMMGPGRAPFMGGMGVPAAAPTRAGRPVGMPPMFP 583
Query: 594 NQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKA 653
P + ++R KRD R +NDRNDRYS GSDQGR Q+M GP DDE QY Q G K+
Sbjct: 584 PPPPPNSQNNRT-KRDQRTPVNDRNDRYSGGSDQGRGQDMAGP----DDETQYLQ-GLKS 637
Query: 654 NQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKR 688
Q+DQ+G N FRNDESESEDEAPRRSRHGEGKKKR
Sbjct: 638 QQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 673
>gi|449447537|ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 946 bits (2444), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/715 (72%), Positives = 565/715 (79%), Gaps = 24/715 (3%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMP--TASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPD 58
MEDSEG LSFDFEGGLDAGP P T+S P I SDS+A AA+A + + + +
Sbjct: 1 MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAE 60
Query: 59 HASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ 118
AP + RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRL+GECREQ
Sbjct: 61 PTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
Query: 119 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNP 178
DCVYKHTNEDIKECNMYK GFCPNGPDCRYRH KLPGPPP +EE+LQKIQ + SYN+G
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPS 180
Query: 179 NKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT 237
NK F QRG S Q +KSQF Q P V QG GK S AES NV QQQ Q Q T
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQ--ASQT 238
Query: 238 QMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 297
+Q+L NG PNQ NRNAT LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA
Sbjct: 239 PVQSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 298
Query: 298 FDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCE 357
FDSA+NVILIFSVNRTRHFQGCAKM S+IGGSV GGNWKYAHGT HYG+NFS+KWLKLCE
Sbjct: 299 FDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCE 358
Query: 358 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKRE 417
LSF KTRHLRNPYNENLPVKISRDCQELEPS+GEQLA+LLYLEPD ELMA+SVAAE+KRE
Sbjct: 359 LSFQKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKRE 418
Query: 418 EEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE-----ESLGTASQGRGRGRGMMWP 472
EEKAKGVNPD G +NPDIVPFEDNEEEEEEESEEEE +S G QGRGRGRGMMWP
Sbjct: 419 EEKAKGVNPDIGSENPDIVPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMWP 478
Query: 473 GPMPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGP--RF 529
MP+ RGARP GM+GFPP M+G DG SYG VTPDGFPMPD+FG+ PR F PYGP RF
Sbjct: 479 PHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPRF 538
Query: 530 SGDFTGP-GGMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGRPVG 587
SGDF GP MMF GRP QP ++FPP+GFG MMMG GR PFMGGMG A NP R GRPVG
Sbjct: 539 SGDFMGPPTAMMFRGRPSQPAAMFPPSGFG-MMMGQGRGPFMGGMGVAGANPARPGRPVG 597
Query: 588 VPPPFPNQPQ-SSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQY 646
V P +P SSQN +RA KRD RG NDR Y G DQ + E+ GR D+E+QY
Sbjct: 598 VSPLYPPPAVPSSQNMNRAIKRDQRGLTNDR---YIVGMDQNKGVEIQSSGR--DEEMQY 652
Query: 647 QQEGSKANQEDQYGS-RNFRNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSD 700
+Q GSKA ++QYG+ FRN+ESESEDEAPRRSRHGEGKKKRR SEGDA A S+
Sbjct: 653 KQ-GSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISN 706
>gi|255564409|ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical protein [Ricinus communis]
Length = 702
Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/718 (76%), Positives = 585/718 (81%), Gaps = 33/718 (4%)
Query: 1 MEDSEGGLSFDFEGGLDA-GPGMPTASNPAIQSDSTAAAAAAAANANHAAPS-SSGAAPD 58
M+D++GGLSFDFEGGLD+ GP PTAS PAI SD+TAA AAA N+ P+ SS
Sbjct: 1 MDDTDGGLSFDFEGGLDSSGPTNPTASIPAIPSDNTAAVAAATNNS--IVPNVSSNDPAS 58
Query: 59 HASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ 118
A+A + +GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQ
Sbjct: 59 AAAAAANNQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 118
Query: 119 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNP 178
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEVLQKIQQ++SYN+G+
Sbjct: 119 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSS 178
Query: 179 NKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT 237
NK FQQRGA F DKSQFSQGPN + QG A K ESANV Q Q Q QG Q+
Sbjct: 179 NKFFQQRGAGFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQ 238
Query: 238 QMQ------NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE 291
Q NLPNG PNQ NR A PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE
Sbjct: 239 QQATQTPTQNLPNGQPNQANRTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE 298
Query: 292 AKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVK 351
AKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIG SVGGGNWKYAHGTAHYGRNFSVK
Sbjct: 299 AKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVK 358
Query: 352 WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVA 411
WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPS+G QLA LLY EPDSELMAIS+A
Sbjct: 359 WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLA 418
Query: 412 AEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGR 467
AEAKREEEKAKGVNP+NGGDNPDIVPFEDNEEEEEEESEEEE ++LG QGRGRGR
Sbjct: 419 AEAKREEEKAKGVNPENGGDNPDIVPFEDNEEEEEEESEEEEESFGQALGAPGQGRGRGR 478
Query: 468 GMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYG 526
G++WP MPLARGARP+PGMRGFPPMM+GAD FSYG VTPDGF MPDLFGVAPR F PY
Sbjct: 479 GIIWPH-MPLARGARPIPGMRGFPPMMMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYA 537
Query: 527 PRFSGDFTGPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGR 584
PRFSGDFTG GMMFPGRPPQPG VF PNG GMMMGPGR PFMGGMGP +TNP RG
Sbjct: 538 PRFSGDFTGAASGMMFPGRPPQPGGVF-PNGGFGMMMGPGRAPFMGGMGPNSTNPLRGNW 596
Query: 585 PVGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEV 644
P G+ P P + + R KRD R + NDRYS GSDQGR PDDE
Sbjct: 597 PGGM----PFPPLPTPSPQRPVKRDQRMTA---NDRYSTGSDQGR-----NTAGEPDDEA 644
Query: 645 QYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701
+YQQEG KA+ EDQ+G+ N FRNDESESEDEAPRRSRHGEGKKKRR SEGDA SD+
Sbjct: 645 RYQQEGLKASHEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGSDH 702
>gi|356555859|ref|XP_003546247.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 691
Score = 894 bits (2311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/703 (74%), Positives = 570/703 (81%), Gaps = 27/703 (3%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASN---PAIQSDSTAAAAAAAANANHAAPSSSGAAP 57
MEDSEG LSFDFEGGLDA P A+ P +Q DS+AAA+A + N HAAP+ S A P
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAVPSGPLVQHDSSAAASAVS-NGGHAAPAPSTADP 59
Query: 58 DHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE 117
+ P GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRL+GECRE
Sbjct: 60 AGGNVP-----GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECRE 114
Query: 118 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGN 177
QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K PGPPP VEEVLQKIQ + SYN+ +
Sbjct: 115 QDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLFSYNYNS 174
Query: 178 PNKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQT 236
NK FQQRGA ++ Q +K Q QG N+ NQG GK AES N QQ VQQ QQ
Sbjct: 175 SNKFFQQRGASYNQQAEKPQLPQGTNSTNQGVTGKPLPAESGNAQPQQQVQQ-SQQQVNQ 233
Query: 237 TQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
+QMQN+ NG PNQ NR ATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNE
Sbjct: 234 SQMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNE 293
Query: 297 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLC 356
AFDS ENVIL+FSVNRTRHFQGCAKMTS+IGGSV GGNWKYAHGTAHYGRNFSVKWLKLC
Sbjct: 294 AFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLC 353
Query: 357 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLA+LLYLEPDSELMAISVAAE+KR
Sbjct: 354 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKR 413
Query: 417 EEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEE----EESLGTASQGRGRGRGMMWP 472
EEEKAKGVNPDNGG+NPDIVPFEDNEEEEEEES+EE +G A QGRGRGRGMMWP
Sbjct: 414 EEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFSHGVGPAGQGRGRGRGMMWP 473
Query: 473 GPMPLARGARPVPGMRGFPPMMIGADGFSYG----VTPDGFPMPDLFGVAPRPFAPYGPR 528
MPL RGARP+PGM+GF P+M+G DG SYG V PDGF MPDLFGV PR FAPYGPR
Sbjct: 474 PHMPLGRGARPMPGMQGFNPVMMG-DGLSYGPVGPVGPDGFGMPDLFGVGPRGFAPYGPR 532
Query: 529 FSGDFTG-PGGMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATN-PRGGRPV 586
FSGDF G P MMF GRP QPG +FP GF GMMM PGR PFMGGMG N PRGGRPV
Sbjct: 533 FSGDFGGPPAAMMFRGRPSQPG-MFPSGGF-GMMMNPGRGPFMGGMGVGGANPPRGGRPV 590
Query: 587 GVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQY 646
+PP FP P QN++RAAKRD R + DRNDR+ +GS+QG++Q+M GPDD+ QY
Sbjct: 591 NMPPMFPPPPPLPQNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDAQY 648
Query: 647 QQEGSKANQEDQYGSRNFRNDESESEDEAPRRSRHGEGKKKRR 689
QQ G K NQ+D NFRND+SESEDEAPRRSRHGEGKKK +
Sbjct: 649 QQ-GYKGNQDDHPAVNNFRNDDSESEDEAPRRSRHGEGKKKHK 690
>gi|224116602|ref|XP_002317344.1| predicted protein [Populus trichocarpa]
gi|222860409|gb|EEE97956.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/759 (67%), Positives = 550/759 (72%), Gaps = 97/759 (12%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANA--NHAAPSSSGAAPD 58
MED EG LSFDFEGGLD+GP P+AS AI SD+ +A AAA N A+ S++
Sbjct: 1 MEDPEGVLSFDFEGGLDSGPTNPSASMAAIPSDNQGSAMAAAPNTATTGASTSNTTTNNS 60
Query: 59 HASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ 118
S +GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQ
Sbjct: 61 SDSGAADMQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQ 120
Query: 119 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNP 178
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP V E +QK QQ++SYN+GN
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVVEAVQKTQQLNSYNYGNS 180
Query: 179 NKHFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQ 238
NK FQQR A Q Q + P + K S ESAN L QQ Q Q Q
Sbjct: 181 NKFFQQRTAGVPQ----QIEKSPITII-----KPSGMESAN-----LQQQQQPQTQTQAQ 226
Query: 239 MQNLPNGL--PNQTNRNATPLPQGISR--------------------------------- 263
NLPNG PN NR AT LPQGISR
Sbjct: 227 APNLPNGQQQPNPLNRIATTLPQGISRCVQSSEVFYRVICKSIIIVLASFLENFCTPQTL 286
Query: 264 --------------YFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFS 309
YFIVKSCN ENLELSVQQGVWATQRSNE KLNEAFDSAENVILIFS
Sbjct: 287 CAFLWSIISGKPEKYFIVKSCNLENLELSVQQGVWATQRSNEPKLNEAFDSAENVILIFS 346
Query: 310 VNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 369
VNRTRHFQGCAKMTSKIG SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP
Sbjct: 347 VNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 406
Query: 370 YNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNG 429
+NENLPVKISRDCQELEPSIGEQLA+LLYLEPDS+LMAISVAAEAKREEEK KGVNPD+G
Sbjct: 407 FNENLPVKISRDCQELEPSIGEQLASLLYLEPDSDLMAISVAAEAKREEEKEKGVNPDSG 466
Query: 430 GDNPDIVPFEDNEEEEEEESEEEEES----LGTASQGRGRGRGMMWPGPMPLARGARPVP 485
G+NPDIVPFEDNEEEEEEESEEE E+ LG A+QGRGRGRG+MWP +P+ARGARP+P
Sbjct: 467 GENPDIVPFEDNEEEEEEESEEEVEAFGHPLGAAAQGRGRGRGIMWPPHIPIARGARPIP 526
Query: 486 GMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTG-PGGMMFPGR 544
GMR FPPMM+GADGFSYG PD F MPDLFGVAPR FAPYGPRFSGDFTG GMMFPGR
Sbjct: 527 GMRAFPPMMMGADGFSYGAVPDSFGMPDLFGVAPRGFAPYGPRFSGDFTGATSGMMFPGR 586
Query: 545 PPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGRPVGVPPPFPNQPQSSQNSS 603
P QPG++FP G GMMMG GR PFMGGMGP A+NP RG RP G+ P SSQN++
Sbjct: 587 PSQPGAMFPAGG-FGMMMGSGRAPFMGGMGPTASNPLRGPRPGGMFAPL--LASSSQNNN 643
Query: 604 RAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRN 663
R+ KRD R + P +DE +Y QE KA+ EDQ+G+ N
Sbjct: 644 RSFKRDQRAA----------------------PTGESNDETRYPQETYKASHEDQFGAVN 681
Query: 664 F-RNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSDN 701
RNDESESEDEAPRRSRHGEGKKKRR SEGDA SD+
Sbjct: 682 SNRNDESESEDEAPRRSRHGEGKKKRRGSEGDANPGSDH 720
>gi|356532407|ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 840 bits (2169), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/699 (73%), Positives = 558/699 (79%), Gaps = 29/699 (4%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASN--PAIQSDSTAAAAAAAANANHAAPSSSGAAPD 58
MEDSEG LSFDFEGGLDA P A+ P I DS+AAA+A + N AAP+ S P
Sbjct: 1 MEDSEGVLSFDFEGGLDAAPSSAAAAPSGPLIPHDSSAAASAVS-NGGPAAPAPSAVDPV 59
Query: 59 HASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ 118
VP GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDK+RMPVCRFFRL+GECREQ
Sbjct: 60 -GGGNVP---GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQ 115
Query: 119 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNP 178
DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRH K PGPPP VEEVLQKIQ + SYN+ +
Sbjct: 116 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSS 175
Query: 179 NKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTT 237
NK FQQRGA ++ Q +K QG N+ NQG G AE N QQ VQQ QQ +
Sbjct: 176 NKFFQQRGASYNQQAEKPLLPQGNNSTNQGVTGNPLPAELGNAQPQQQVQQ-SQQQVNQS 234
Query: 238 QMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 297
QMQN+ NG PNQ NR ATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEA
Sbjct: 235 QMQNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEA 294
Query: 298 FDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCE 357
FDS ENVILIFSVNRTRHFQGCAKMTSKIGGSV GGNWKYAHGTAHYGRNFSVKWLKLCE
Sbjct: 295 FDSVENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCE 354
Query: 358 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKRE 417
LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLA+LLYLEPDSELMAISVAAE+KRE
Sbjct: 355 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKRE 414
Query: 418 EEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQGRGRGRGMMWPG 473
EEKAKGVNPDNGG+NPDIVPFEDNEEEEEEES+EEE +G A QGRGRGRGMMWP
Sbjct: 415 EEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPP 474
Query: 474 PMPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGPRFSGD 532
MPL RGARP+PGM+GF P+M+G DG SYG V PDGF MPDLFGV PR FAPYGPRFSGD
Sbjct: 475 HMPLGRGARPMPGMQGFNPVMMG-DGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGD 533
Query: 533 FTG-PGGMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATN-PRGGRPVGVPP 590
F G P MMF GRP QPG P G GMM+ PGR PFMGG+G N PRGGRPV +PP
Sbjct: 534 FGGPPAAMMFRGRPSQPGMF--PGGGFGMMLNPGRGPFMGGIGVGGANPPRGGRPVNMPP 591
Query: 591 PFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEG 650
FP P QN++RAAKRD R + DRNDR+ +GS+QG++Q+M GPDD+ QYQQ G
Sbjct: 592 MFPPPPPLPQNANRAAKRDQRTA--DRNDRFGSGSEQGKSQDMLSQSGGPDDDPQYQQ-G 648
Query: 651 SKANQEDQYGSRNFRNDESESEDEAPRRSRHGEGKKKRR 689
K NQ+D D+SESEDEAPRRSRHGEGKKK +
Sbjct: 649 YKGNQDDH-------PDDSESEDEAPRRSRHGEGKKKHK 680
>gi|224061049|ref|XP_002300333.1| predicted protein [Populus trichocarpa]
gi|222847591|gb|EEE85138.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 828 bits (2139), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/726 (70%), Positives = 547/726 (75%), Gaps = 82/726 (11%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDS-----TAAAAAAAANANHAAPSSSGA 55
MEDSEG LSFDFEGGLD+GP P AS PAI SD+ AA N S+SGA
Sbjct: 1 MEDSEGVLSFDFEGGLDSGPANPIASIPAIPSDNYGAATAAAPNTTNTTTNTTNNSNSGA 60
Query: 56 APDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGEC 115
A A GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GEC
Sbjct: 61 ADIQA--------GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGEC 112
Query: 116 REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNH 175
REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEV+QKIQQ++SYN
Sbjct: 113 REQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQLNSYNG 172
Query: 176 GNPNKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGT 234
NK+FQQR A FS Q +KS PN + K S ESANV QQQ QQ Q Q
Sbjct: 173 VTSNKNFQQRNAGFSQQIEKS-----PNTII-----KPSGTESANVQQQQQQQQ-QTQTP 221
Query: 235 QTTQMQNLPNGLPNQTNRNATPLPQGISR-----------YFIVKSCNRENLELSVQQGV 283
T Q+ PN NR ATPLPQGIS YFIVKSCNRENLELSVQQGV
Sbjct: 222 HLTNGQHQQPQQPNPLNRIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSVQQGV 281
Query: 284 WATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAH 343
WATQRSNE KLNEA DSA+NVILIFSVNRTRHFQGCAKM SKIG SVGGGNWKYAHGTAH
Sbjct: 282 WATQRSNEIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAHGTAH 341
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDS 403
YGRNFSVKWLKLCELSFHKTRHLRNP+NENLPVKISRDCQELEPSIGEQLA+LLYLEPDS
Sbjct: 342 YGRNFSVKWLKLCELSFHKTRHLRNPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDS 401
Query: 404 ELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTA 459
ELMA+S+AAEAKREEEK KGVNPD+GG+NPDIVPFEDNEEEEEEESEEEE + LG A
Sbjct: 402 ELMAVSLAAEAKREEEKEKGVNPDSGGENPDIVPFEDNEEEEEEESEEEEESFGQPLGPA 461
Query: 460 SQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYG-VTPDGFPMPDLFGVA 518
+QGRGRGRGMMWP P+ARGARP+PG+RGFPPMM+GADGFSYG VTPD F MPDLFGVA
Sbjct: 462 AQGRGRGRGMMWPSHNPMARGARPIPGIRGFPPMMMGADGFSYGAVTPDSFGMPDLFGVA 521
Query: 519 PRPFAPYGPRFSGDFTGPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAA 577
R F PYGPRFSGDFTG GMMFPGRP QPG+VFP G GMMMGPGRPPF+GGMGP
Sbjct: 522 SRGFPPYGPRFSGDFTGAASGMMFPGRPSQPGAVFPAGG-FGMMMGPGRPPFIGGMGPTP 580
Query: 578 TNP-RGGRPVGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGP 636
+N RG RP G+ PFP SSQN+SR+ KRD R + NDRNDR+
Sbjct: 581 SNLLRGPRPGGMFSPFP--APSSQNNSRSVKRDQRAAANDRNDRH--------------- 623
Query: 637 GRGPDDEVQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKRRDSEGDA 695
+Q+G+ N RNDESESEDEAPRRSRHGEGKKKRR S DA
Sbjct: 624 --------------------NQFGAVNSIRNDESESEDEAPRRSRHGEGKKKRRGSGDDA 663
Query: 696 AASSDN 701
S++
Sbjct: 664 TPGSEH 669
>gi|297740812|emb|CBI30994.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 758 bits (1957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/461 (83%), Positives = 410/461 (88%), Gaps = 7/461 (1%)
Query: 87 MKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDC 146
MKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTNEDIKECNMYKLGFCPNG DC
Sbjct: 1 MKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGSDC 60
Query: 147 RYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFSHQTDKSQFSQGPNAVNQ 206
RYRH KLPGPPP++EEV QKIQQ+SS+N+G+ N+ +Q R ++ QT+KSQ QG NAVN
Sbjct: 61 RYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNPYNQQTEKSQILQGSNAVNL 120
Query: 207 GAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFI 266
G KSST E+ NV QQQ QP QQ T MQNLPNGLPNQ N+ A+PLPQGISRYFI
Sbjct: 121 GTVAKSSTTEAINVQQQQ--VQPPQQQVSQTPMQNLPNGLPNQANKTASPLPQGISRYFI 178
Query: 267 VKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
VKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS ENVILIFSVNRTRHFQGCAKMTSKI
Sbjct: 179 VKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKI 238
Query: 327 GGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 386
GG VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE
Sbjct: 239 GGFVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 298
Query: 387 PSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEE 446
PSIGEQLA+LLYLEPDSELMAIS+AAE+KREEEKAKGVNPDNGG+NPDIVPFEDNEEEEE
Sbjct: 299 PSIGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEE 358
Query: 447 EESEEEE----ESLGTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSY 502
EESEEEE ++LG A+QGRGRGRG+MWP MPLARGARP+P MRGFPP+M+GADGFSY
Sbjct: 359 EESEEEEESFGQALGPAAQGRGRGRGIMWPPHMPLARGARPIPSMRGFPPVMMGADGFSY 418
Query: 503 -GVTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPGGMMFP 542
V PDGF MPD+FGV PR F PYGPRFSGDFTGP M P
Sbjct: 419 SAVPPDGFAMPDIFGVGPRAFPPYGPRFSGDFTGPASGMIP 459
>gi|297851474|ref|XP_002893618.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
gi|297339460|gb|EFH69877.1| hypothetical protein ARALYDRAFT_890588 [Arabidopsis lyrata subsp.
lyrata]
Length = 631
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/695 (61%), Positives = 489/695 (70%), Gaps = 71/695 (10%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
MED++G LSFDFEGGLD+GP P+AS P D++++AA + AP+ DH+
Sbjct: 1 MEDADG-LSFDFEGGLDSGPAQPSASVPVAPPDNSSSAAV------NVAPTY-----DHS 48
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
SA V RSFRQTVCRHWLR LCMKGDACGFLHQYDK+RMP+CRFFRL+GECREQDC
Sbjct: 49 SATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQYDKARMPICRFFRLYGECREQDC 108
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEVLQKIQQ++SYN+G PN+
Sbjct: 109 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTSYNYG-PNR 167
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ 240
+Q R DK Q + QG E+ N+ QQQ Q QQ
Sbjct: 168 FYQPRNVAPQLQDKPQ----GQVLTQG-----QPQEAGNLQQQQQQQP--QQSQHQVSQT 216
Query: 241 NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 300
+PN +QTNR + PLPQG++RYF+VKSCNREN ELSVQQGVWATQRSNE+KLNEAFDS
Sbjct: 217 QIPNPA-DQTNRTSHPLPQGVNRYFVVKSCNRENFELSVQQGVWATQRSNESKLNEAFDS 275
Query: 301 AENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 360
ENVILIFSVNRTRHFQGCAKMTS+IG +GGGNWK+ HGTA YGRNFSVKWLKLCELSF
Sbjct: 276 VENVILIFSVNRTRHFQGCAKMTSRIGSYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSF 335
Query: 361 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
HKTR+LRNPYNENLPVKISRDCQELEPS+GEQLA+LLYLEPDS+LMAIS+AAEAKREEEK
Sbjct: 336 HKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSDLMAISIAAEAKREEEK 395
Query: 421 AKGVNPDNGGDNPDIVPF--EDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLA 478
AKGVNP++ +NPDIVPF + EEEEE+ESEEEEES+ QGRGRGRGMMWP MPL
Sbjct: 396 AKGVNPESRAENPDIVPFEDNEEEEEEEDESEEEEESMAGGPQGRGRGRGMMWPPQMPLG 455
Query: 479 RGARPVPGMRGFPPMMIG-ADGFSYGVTPDGFP-MPDLFGVAPRPFAPYGPRFSGDFTGP 536
RG RP+PGM GFP ++G D F YG P G+ MPD FG+ PRPF PYGPRF GDF GP
Sbjct: 456 RGIRPMPGMGGFPLGVMGPGDAFPYG--PGGYNGMPDPFGMGPRPFGPYGPRFGGDFRGP 513
Query: 537 G-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPPFPNQ 595
GMMFPGRPPQ F G MG PRGGRP+ PP
Sbjct: 514 VPGMMFPGRPPQ--------QFPHGGYGMMGGGRGPHMGGMGNAPRGGRPMYYPP----- 560
Query: 596 PQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQ 655
+ +S+R + + +R+D G+DQ Q + + +
Sbjct: 561 ---ATSSARPGPTNRK--TPERSDERGVGADQ-------------------QNQDTSHDM 596
Query: 656 EDQYGSRNFRN--DESESEDEAPRRSRHGEGKKKR 688
E + RN ESE EDEAPRRSRHGEGKK+R
Sbjct: 597 EQFEVGNSLRNEESESEDEDEAPRRSRHGEGKKRR 631
>gi|79356321|ref|NP_174334.2| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
gi|229553918|sp|A9LNK9.1|CPSF_ARATH RecName: Full=Cleavage and polyadenylation specificity factor
CPSF30; AltName: Full=Zinc finger CCCH domain-containing
protein 11; Short=AtC3H11
gi|160338218|gb|ABX26048.1| cleavage and polyadenylation specificity factor-YT521B [Arabidopsis
thaliana]
gi|332193100|gb|AEE31221.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
Length = 631
Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/695 (61%), Positives = 485/695 (69%), Gaps = 71/695 (10%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
MED++G LSFDFEGGLD+GP TAS P +++++AA + AP+ DH+
Sbjct: 1 MEDADG-LSFDFEGGLDSGPVQNTASVPVAPPENSSSAAV------NVAPTY-----DHS 48
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
SA V RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRL+GECREQDC
Sbjct: 49 SATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDC 108
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEVLQKIQQ+++YN+G N+
Sbjct: 109 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYGT-NR 167
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ 240
+Q R D+ Q Q P + ES N+ QQQ Q Q Q + +
Sbjct: 168 LYQARNVAPQLQDRPQ-GQVPM--------QGQPQESGNLQQQQQQQPQQSQHQVSQTL- 217
Query: 241 NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 300
+PN +QTNR + PLPQG++RYF+VKS NREN ELSVQQGVWATQRSNEAKLNEAFDS
Sbjct: 218 -IPNPA-DQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFDS 275
Query: 301 AENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSF 360
ENVILIFSVNRTRHFQGCAKMTS+IGG +GGGNWK+ HGTA YGRNFSVKWLKLCELSF
Sbjct: 276 VENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSF 335
Query: 361 HKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
HKTR+LRNPYNENLPVKISRDCQELEPS+GEQLA+LLYLEPDSELMAIS+AAEAKREEEK
Sbjct: 336 HKTRNLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEK 395
Query: 421 AKGVNPDNGGDNPDIVPF--EDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLA 478
AKGVNP++ +NPDIVPF + EEEEE+ESEEEEES+ QGRGRGRG+MWP MPL
Sbjct: 396 AKGVNPESRAENPDIVPFEDNEEEEEEEDESEEEEESMAGGPQGRGRGRGIMWPPQMPLG 455
Query: 479 RGARPVPGMRGFPPMMIG-ADGFSYGVTPDGFP-MPDLFGVAPRPFAPYGPRFSGDFTGP 536
RG RP+PGM GFP ++G D F YG P G+ MPD FG+ PRPF PYGPRF GDF GP
Sbjct: 456 RGIRPMPGMGGFPLGVMGPGDAFPYG--PGGYNGMPDPFGMGPRPFGPYGPRFGGDFRGP 513
Query: 537 G-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPPFPNQ 595
GMMFPGRPPQ F G MG PRGGRP+ PP +
Sbjct: 514 VPGMMFPGRPPQ--------QFPHGGYGMMGGGRGPHMGGMGNAPRGGRPMYYPPATSSA 565
Query: 596 PQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQ 655
N + D RG D Q Q+ S +
Sbjct: 566 RPGPSNRKTPERSDERGVSGD----------------------------QQNQDASHDME 597
Query: 656 EDQYGSRNFRN--DESESEDEAPRRSRHGEGKKKR 688
+ + G+ + RN ESE EDEAPRRSRHGEGKK+R
Sbjct: 598 QFEVGN-SLRNEESESEDEDEAPRRSRHGEGKKRR 631
>gi|115469520|ref|NP_001058359.1| Os06g0677700 [Oryza sativa Japonica Group]
gi|122167909|sp|Q0DA50.1|C3H45_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 45;
Short=OsC3H45
gi|113596399|dbj|BAF20273.1| Os06g0677700 [Oryza sativa Japonica Group]
Length = 665
Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/696 (57%), Positives = 459/696 (65%), Gaps = 55/696 (7%)
Query: 5 EGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPV 64
+G LSFDFEGGLD P SD
Sbjct: 3 DGDLSFDFEGGLDQPPAGGGGGPAPHSSDPGGVGGGGGGGGPGDGGGHGRGRGRG----- 57
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKH 124
S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC YKH
Sbjct: 58 -------SYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKH 110
Query: 125 TNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQ 184
+ +D+KECNMYK+GFCPNGP+CRY+HVKLPGPPP VEEVLQKI QI S+N N ++H
Sbjct: 111 SYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRH--- 167
Query: 185 RGAFSHQTDKSQFSQGPNAVNQGAAGKSST--AESANVHQQQLVQQPQQQG--------- 233
++ Q ++ Q QG NQ + ++T A+ A Q Q Q Q
Sbjct: 168 -NNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQ 226
Query: 234 -----TQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQR 288
Q+Q++PNG NQ R ATPLPQG SRYFIVKSCNRENLE+SVQQG+WATQR
Sbjct: 227 QQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWATQR 286
Query: 289 SNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNF 348
SNEAKLNEAF+S ENVILIFS+NRTR+FQGCAKMTS+IGG +GGGNWK AHGTAHYGRNF
Sbjct: 287 SNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYGRNF 346
Query: 349 SVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAI 408
S++WLKLCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL AI
Sbjct: 347 SIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAI 406
Query: 409 SVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRG 468
+AAEAK+EEEKAKGV+ D DN DIV F+DNEEEEEEESEEEEE G SQGRGRGRG
Sbjct: 407 LIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEGNGQESQGRGRGRG 466
Query: 469 MMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPYGPR 528
MMWP MP+ RG P+ G RGFPP MIG G MPD FGV PR F P+GPR
Sbjct: 467 MMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFGFGGGF----GMPDPFGV-PRGFPPFGPR 521
Query: 529 FSGDFTGPG---GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRP 585
F GDF G GM+FPGRPPQPG +FP MMMGPGR P + G R RP
Sbjct: 522 FPGDFARGGPMPGMVFPGRPPQPGGMFPMG--LEMMMGPGRGP-LMGGLGMGGPGRPNRP 578
Query: 586 VGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQ 645
VG+ PF P N R KR+ R +R DRY SDQG RG D
Sbjct: 579 VGM-APFMPPPPPPNN--RGTKREQRRPGGERGDRYETTSDQG--------SRGHDATGN 627
Query: 646 YQQEGSKANQEDQYGSRNFRNDESESEDE-APRRSR 680
EG+++ D+YG R+D+SES++E APRRSR
Sbjct: 628 SGAEGARSQSGDRYGRSALRDDDSESDEEAAPRRSR 663
>gi|357123412|ref|XP_003563404.1| PREDICTED: zinc finger CCCH domain-containing protein 45-like
[Brachypodium distachyon]
Length = 653
Score = 647 bits (1668), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/690 (57%), Positives = 467/690 (67%), Gaps = 55/690 (7%)
Query: 5 EGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPV 64
+G LSFDFEGGLD P AA A + + +
Sbjct: 3 DGDLSFDFEGGLDPAP-------------------AAGGLAPSSGDAGAIGGGGMDGIGH 43
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKH 124
GR S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC YKH
Sbjct: 44 GRGRGRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKH 103
Query: 125 TNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQ 184
+ +D+KECNMYK+GFCPNGP CRY+HVKLPGPPP VEEVL KI Q+ + NK Q
Sbjct: 104 SYDDVKECNMYKMGFCPNGPHCRYKHVKLPGPPPPVEEVLAKILQVRTSGF---NKFNQH 160
Query: 185 RGA-FSHQTDKSQFSQGPNAVNQGAAGKSST----------AESANVHQQQLVQQPQQQG 233
RG ++ Q ++ + G NQ + ++ A++ N Q Q QQ+
Sbjct: 161 RGNNYNQQGERPRPPHGSGLPNQNSTENATAVTMQPAAGQQAQTMNQQPPQKQQPQQQKP 220
Query: 234 TQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 293
Q+Q +PNG NQT R ATPLPQG +RYFIVKSCNRENLE+SVQQG+WATQRSNEAK
Sbjct: 221 NTNDQVQGVPNGSSNQTTRIATPLPQGTTRYFIVKSCNRENLEISVQQGIWATQRSNEAK 280
Query: 294 LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWL 353
LNEAF+S ENVILIFS+NRTR+FQGCAKMTS+IGG +GGGNWK A+GTAHYGRNFS++WL
Sbjct: 281 LNEAFESMENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSANGTAHYGRNFSLQWL 340
Query: 354 KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAE 413
KLCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL + VAAE
Sbjct: 341 KLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTEMLVAAE 400
Query: 414 AKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPG 473
AKREEEKAKGV+ D DN DIV F+DNEEEEEEESEEEEE+ G SQGRGRGRGMMWP
Sbjct: 401 AKREEEKAKGVSADEATDNQDIVLFDDNEEEEEEESEEEEENNGPESQGRGRGRGMMWPP 460
Query: 474 PMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPYGPRFSGDF 533
M + R P+ G RGFPP M+G DGF +G + F MPD FG+ PR F P+GPRF G+F
Sbjct: 461 HMGMPRAVGPLMGARGFPPNMMG-DGFGFG---NAFGMPDPFGM-PRGFPPFGPRFPGEF 515
Query: 534 T-GPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPP 591
GP GM+FPGRPPQ G +FP MMMGPGR + G R RP+G+ P
Sbjct: 516 ARGPMPGMVFPGRPPQHGGLFPMG--LEMMMGPGRGGPLMGGMGMGGPGRPNRPIGMAP- 572
Query: 592 FPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGS 651
P + R +R G DR+DRY GS+QG RG D +G+
Sbjct: 573 -FMPPPPPRPVKRGDQRRPGGG--DRSDRYETGSEQG--------SRGHDTAGNSAADGA 621
Query: 652 KANQEDQYGSRNFRNDESESEDE-APRRSR 680
++ D+YG +FR+D+SES++E APRRS+
Sbjct: 622 RSQSGDKYGRSSFRDDDSESDEEAAPRRSK 651
>gi|52076625|dbj|BAD45526.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
gi|52076911|dbj|BAD45923.1| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
Japonica Group]
Length = 678
Score = 639 bits (1647), Expect = e-180, Method: Compositional matrix adjust.
Identities = 402/709 (56%), Positives = 459/709 (64%), Gaps = 68/709 (9%)
Query: 5 EGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPV 64
+G LSFDFEGGLD P SD
Sbjct: 3 DGDLSFDFEGGLDQPPAGGGGGPAPHSSDPGGVGGGGGGGGPGDGGGHGRGRGRG----- 57
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKH 124
S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC YKH
Sbjct: 58 -------SYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKH 110
Query: 125 TNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQ 184
+ +D+KECNMYK+GFCPNGP+CRY+HVKLPGPPP VEEVLQKI QI S+N N ++H
Sbjct: 111 SYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRH--- 167
Query: 185 RGAFSHQTDKSQFSQGPNAVNQGAAGKSST--AESANVHQQQLVQQPQQQG--------- 233
++ Q ++ Q QG NQ + ++T A+ A Q Q Q Q
Sbjct: 168 -NNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQ 226
Query: 234 -----TQTTQMQNLPNGLPNQTNRNATPLPQGIS-------------RYFIVKSCNRENL 275
Q+Q++PNG NQ R ATPLPQG S RYFIVKSCNRENL
Sbjct: 227 QQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSSSLIKSLVGNVKIRYFIVKSCNRENL 286
Query: 276 ELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNW 335
E+SVQQG+WATQRSNEAKLNEAF+S ENVILIFS+NRTR+FQGCAKMTS+IGG +GGGNW
Sbjct: 287 EISVQQGIWATQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNW 346
Query: 336 KYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAA 395
K AHGTAHYGRNFS++WLKLCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+
Sbjct: 347 KSAHGTAHYGRNFSIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLAS 406
Query: 396 LLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEES 455
LLYLEPDSEL AI +AAEAK+EEEKAKGV+ D DN DIV F+DNEEEEEEESEEEEE
Sbjct: 407 LLYLEPDSELTAILIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEG 466
Query: 456 LGTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLF 515
G SQGRGRGRGMMWP MP+ RG P+ G RGFPP MIG G MPD F
Sbjct: 467 NGQESQGRGRGRGMMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFGFGGGF----GMPDPF 522
Query: 516 GVAPRPFAPYGPRFSGDFTGPG---GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGG 572
GV PR F P+GPRF GDF G GM+FPGRPPQPG +FP MMMGPGR P + G
Sbjct: 523 GV-PRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMFPMG--LEMMMGPGRGP-LMG 578
Query: 573 MGPAATNPRGGRPVGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQE 632
R RPVG+ PF P N R KR+ R +R DRY SDQG
Sbjct: 579 GLGMGGPGRPNRPVGM-APFMPPPPPPNN--RGTKREQRRPGGERGDRYETTSDQG---- 631
Query: 633 MGGPGRGPDDEVQYQQEGSKANQEDQYGSRNFRNDESESEDE-APRRSR 680
RG D EG+++ D+YG R+D+SES++E APRRSR
Sbjct: 632 ----SRGHDATGNSGAEGARSQSGDRYGRSALRDDDSESDEEAAPRRSR 676
>gi|326521084|dbj|BAJ96745.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 391/690 (56%), Positives = 453/690 (65%), Gaps = 68/690 (9%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
LSFDFEGGLD GP AA A +A +
Sbjct: 10 LSFDFEGGLDTGP-------------------AAGGLAPSSADAGGTGGGGPDGGGHGRG 50
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
GR S+RQTVCRHWLR LCMKGDACGFLHQ+DK+RMPVCRFFR +GECRE DC YKH+ +
Sbjct: 51 RGRGSYRQTVCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYD 110
Query: 128 DIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGA 187
D+KECNMYK+GFCPNGP+CRY+HVKLPGPPP VEEVL KI Q+ S N N+H +
Sbjct: 111 DVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLAKILQMRSSNFNKFNQH--RNNN 168
Query: 188 FSHQTDKSQ---FSQGPNAVNQGAAGKSSTAESANVHQQQL----------VQQPQQQGT 234
++ Q D+ + S PN + A S+ +A Q + VQQ QQ+
Sbjct: 169 YNQQGDRPRPPPASGLPNQNSTDNATASAMQPAAGQQAQTMNQQPQQKQQQVQQQQQKPN 228
Query: 235 QTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 294
Q+Q +PNG NQ R ATPLPQG SRYFIVKSCNRENLE+SVQQG+WATQRSNEAKL
Sbjct: 229 TNDQVQGVPNGSSNQPTRLATPLPQGSSRYFIVKSCNRENLEISVQQGIWATQRSNEAKL 288
Query: 295 NEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLK 354
NEAF+S +NVILIFS+NRTR+FQGCAKMTS+IGG +GGGNWK A+GTAHYGRNFS++WLK
Sbjct: 289 NEAFESMDNVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSANGTAHYGRNFSLQWLK 348
Query: 355 LCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEA 414
LCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL A+ VAAEA
Sbjct: 349 LCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAMLVAAEA 408
Query: 415 KREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGP 474
KREEEKAKGV+ D DN DIV FEDNEEEEEEESEEE+E+ G SQGRGRGRGMMWP
Sbjct: 409 KREEEKAKGVSADEAVDNQDIVLFEDNEEEEEEESEEEDENNGQESQGRGRGRGMMWPPQ 468
Query: 475 MPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPY-GPRFSGDF 533
M + RG P+ G RGFPP M+G PD FG+ PR F P+ GPRF
Sbjct: 469 MQMPRG--PMMGPRGFPPNMMGDGFGGGFGFGM----PDPFGM-PRGFPPFGGPRFPDFP 521
Query: 534 TGPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPPF 592
GP GM+FPGRPPQPG P G MMMGPGR R RP+G+
Sbjct: 522 RGPMPGMVFPGRPPQPGMF--PMGL-EMMMGPGR---GPLGMGMGGPGRPNRPIGM---- 571
Query: 593 PNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEV-QYQQEGS 651
P R KRD R DRY GSDQG RG D+ +G+
Sbjct: 572 --APFMPPPPPRPVKRDQR---RPGGDRYETGSDQG--------SRGHDNNAGNSGADGN 618
Query: 652 KANQEDQYGSRNFRNDESESEDE-APRRSR 680
++ D++G FR+D+SES++E APRRSR
Sbjct: 619 RSQSGDRFGRSAFRDDDSESDEEAAPRRSR 648
>gi|242093910|ref|XP_002437445.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
gi|241915668|gb|EER88812.1| hypothetical protein SORBIDRAFT_10g027200 [Sorghum bicolor]
Length = 645
Score = 605 bits (1561), Expect = e-170, Method: Compositional matrix adjust.
Identities = 398/694 (57%), Positives = 463/694 (66%), Gaps = 65/694 (9%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
M+D +GGLSFDFEGGLD+ P AA + P + G
Sbjct: 1 MDDGDGGLSFDFEGGLDSVP----------------AAGGGGPVPSSTDPGAGGGGGGDG 44
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
GR S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC
Sbjct: 45 PGMHGRGRGRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDC 104
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
YKH+ +D+KECNMYK+GFCPNGP+CRY+H+KLPGPPPSVEEVLQKI Q+ S+N N+
Sbjct: 105 AYKHSYDDVKECNMYKMGFCPNGPNCRYKHIKLPGPPPSVEEVLQKILQMRSFNRYGQNR 164
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSST---------AESANVHQQQLVQQPQQ 231
+ + Q ++ Q QG NQ +A ++ A++ N Q Q+P
Sbjct: 165 NNNY----NQQGERPQHPQGSGMPNQNSAENATAAAPPAGGQQAQTMNQQPPQQQQKP-- 218
Query: 232 QGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNE 291
Q Q + NG Q R ATPLPQG SRYFIVKSCNRENLE+SVQQG+WATQRSNE
Sbjct: 219 --NTNDQAQGVSNG--QQATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWATQRSNE 274
Query: 292 AKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVK 351
AKLNEAF+S ENVILIFS+NRTR+FQGCAKMTS+IGG +GGGNWK AHGTAHYGRNFS++
Sbjct: 275 AKLNEAFESTENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYGRNFSMQ 334
Query: 352 WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVA 411
WLKLCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL A+ +A
Sbjct: 335 WLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAMLIA 394
Query: 412 AEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRGMMW 471
AEAKREEEKAKGV+ D DN DIV F+DNEE+EEEESEEEEE+ G SQGRGRGRGMMW
Sbjct: 395 AEAKREEEKAKGVSADEAADNQDIVLFDDNEEDEEEESEEEEEANGQESQGRGRGRGMMW 454
Query: 472 PGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPY-GPRFS 530
P MP+ RG P+ RGFPP M+G G MPD FG+ PR F P+ GPRF
Sbjct: 455 PPQMPMMRG--PMMAGRGFPPNMMGDGFGFGGGF----GMPDPFGM-PRGFPPFVGPRFP 507
Query: 531 GDFT-GPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGV 588
GDF GP GM FPGRPPQP P G MMMGPGR P MGGMG
Sbjct: 508 GDFARGPMPGMGFPGRPPQPF----PLGL-DMMMGPGRGPLMGGMGMGGPGRPNRPMGMA 562
Query: 589 PPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRY-SAGSDQGRAQEMGGPGRGPDDEVQYQ 647
++RAAKR+ R DR DR+ + SDQG RG D+
Sbjct: 563 -----PFMPPPPPNNRAAKREQRRPGGDRGDRFETVSSDQG--------NRGHDNTGNSG 609
Query: 648 QEGSKANQEDQYGSRNFRNDESESEDE-APRRSR 680
+G++A D+YG R+D+SESE+E APRRSR
Sbjct: 610 ADGARAQSGDRYGRSALRDDDSESEEEAAPRRSR 643
>gi|125556470|gb|EAZ02076.1| hypothetical protein OsI_24157 [Oryza sativa Indica Group]
Length = 543
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 351/558 (62%), Positives = 402/558 (72%), Gaps = 35/558 (6%)
Query: 87 MKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDC 146
MKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC YKH+ +D+KECNMYK+GFCPNGP+C
Sbjct: 1 MKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAYKHSYDDVKECNMYKMGFCPNGPNC 60
Query: 147 RYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFSHQTDKSQFSQGPNAVNQ 206
RY+HVKLPGPPP VEEVLQKI QI S+N N ++H ++ Q ++ Q QG NQ
Sbjct: 61 RYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRH----NNYNQQGERPQHPQGSGLPNQ 116
Query: 207 GAA--GKSSTAESANVHQQQLVQQPQQ---------------QGTQTTQMQNLPNGLPNQ 249
+ ++TA+ A Q Q Q + Q+Q++PNG NQ
Sbjct: 117 NSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQQQQQKPNTNDQVQSVPNGSSNQ 176
Query: 250 TNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFS 309
R ATPLPQG SRYFIVKSCNRENLE+SVQQG+WATQRSNEAKLNEAF+S ENVILIFS
Sbjct: 177 ATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWATQRSNEAKLNEAFESIENVILIFS 236
Query: 310 VNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 369
+NRTR+FQGCAKMTS+IGG +GGGNWK AHGTAHYGRNFS++WLKLCELSF KT HLRNP
Sbjct: 237 INRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYGRNFSIQWLKLCELSFQKTHHLRNP 296
Query: 370 YNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNG 429
YN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL AI +AAEAK+EEEKAKGV+ D
Sbjct: 297 YNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAILIAAEAKKEEEKAKGVSADEA 356
Query: 430 GDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLARGARPVPGMRG 489
DN DIV F+DNEEEEEEESEEEEE G SQGRGRGRGMMWP MP+ RG P+ G RG
Sbjct: 357 ADNQDIVLFDDNEEEEEEESEEEEEGNGQESQGRGRGRGMMWPPQMPMLRGVGPMMGGRG 416
Query: 490 FPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPYGPRFSGDFTGPG---GMMFPGRPP 546
FPP MIG G MPD FGV PR F P+GPRF GDF G GM+FPGRPP
Sbjct: 417 FPPNMIGDGFSFGGGF----GMPDPFGV-PRGFPPFGPRFPGDFARGGPMPGMVFPGRPP 471
Query: 547 QPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPPFPNQPQSSQNSSRAA 606
QPG +F P G MMMGPGR + G R RPVG+ P P P + N +R
Sbjct: 472 QPGGMF-PMGL-EMMMGPGR-GPLMGGLGMGGPGRPNRPVGMAPFMP--PTTPPN-NRGT 525
Query: 607 KRDVRGSINDRNDRYSAG 624
KR+ R + +R DR S G
Sbjct: 526 KREQRRAGGERGDRLSPG 543
>gi|449481468|ref|XP_004156192.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 379
Score = 560 bits (1442), Expect = e-156, Method: Compositional matrix adjust.
Identities = 289/385 (75%), Positives = 310/385 (80%), Gaps = 13/385 (3%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMP--TASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPD 58
MEDSEG LSFDFEGGLDAGP P T+S P I SDS+A AA+A + P S P
Sbjct: 1 MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAV----SNPLSGALGPA 56
Query: 59 HASAPV--PHHS--GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
++ P PH + RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMP+CRFFRL+GE
Sbjct: 57 VSAEPTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGE 116
Query: 115 CREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYN 174
CREQDCVYKHTNEDIKECNMYK GFCPNGPDCRYRH KLPGPPP +EE+LQKIQ + SYN
Sbjct: 117 CREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYN 176
Query: 175 HGNPNKHFQQRGA-FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQG 233
+G NK F QRG S Q +KSQF Q P V QG GK S AES NV QQQ Q Q
Sbjct: 177 YGPSNKFFPQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQ-- 234
Query: 234 TQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 293
T +Q+L NG PNQ NRNAT LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK
Sbjct: 235 ASQTPVQSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 294
Query: 294 LNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWL 353
LNEAFDSA+NVILIFSVNRTRHFQGCAKM S+IGGSV GGNWKYAHGT HYG+NFS+KWL
Sbjct: 295 LNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWL 354
Query: 354 KLCELSFHKTRHLRNPYNENLPVKI 378
KLCELSF KTRHLRNPYNENLPVK+
Sbjct: 355 KLCELSFQKTRHLRNPYNENLPVKV 379
>gi|222636084|gb|EEE66216.1| hypothetical protein OsJ_22357 [Oryza sativa Japonica Group]
Length = 644
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 338/576 (58%), Positives = 388/576 (67%), Gaps = 43/576 (7%)
Query: 125 TNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQ 184
T + YK+GFCPNGP+CRY+HVKLPGPPP VEEVLQKI QI S+N N ++H
Sbjct: 90 TRTLVAAIMRYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSFNKFNQHRH--- 146
Query: 185 RGAFSHQTDKSQFSQGPNAVNQGAA--GKSSTAESANVHQQQLVQQPQQQG--------- 233
++ Q ++ Q QG NQ + ++TA+ A Q Q Q Q
Sbjct: 147 -NNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQQQQ 205
Query: 234 -----TQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQR 288
Q+Q++PNG NQ R ATPLPQG SRYFIVKSCNRENLE+SVQQG+WATQR
Sbjct: 206 QQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWATQR 265
Query: 289 SNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNF 348
SNEAKLNEAF+S ENVILIFS+NRTR+FQGCAKMTS+IGG +GGGNWK AHGTAHYGRNF
Sbjct: 266 SNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYGRNF 325
Query: 349 SVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAI 408
S++WLKLCELSF KT HLRNPYN+NLPVKISRDCQELEP IGEQLA+LLYLEPDSEL AI
Sbjct: 326 SIQWLKLCELSFQKTHHLRNPYNDNLPVKISRDCQELEPFIGEQLASLLYLEPDSELTAI 385
Query: 409 SVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEEESLGTASQGRGRGRG 468
+AAEAK+EEEKAKGV+ D DN DIV F+DNEEEEEEESEEEEE G SQGRGRGRG
Sbjct: 386 LIAAEAKKEEEKAKGVSADEAADNQDIVLFDDNEEEEEEESEEEEEGNGQESQGRGRGRG 445
Query: 469 MMWPGPMPLARGARPVPGMRGFPPMMIGADGFSYGVTPDGFPMPDLFGVAPRPFAPYGPR 528
MMWP MP+ RG P+ G RGFPP MIG G MPD FGV PR F P+GPR
Sbjct: 446 MMWPPQMPMLRGVGPMMGGRGFPPNMIGDGFGFGGGF----GMPDPFGV-PRGFPPFGPR 500
Query: 529 FSGDFTGPG---GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNPRGGRP 585
F GDF G GM+FPGRPPQPG +F P G MMMGPGR + G R RP
Sbjct: 501 FPGDFARGGPMPGMVFPGRPPQPGGMF-PMGL-EMMMGPGR-GPLMGGLGMGGPGRPNRP 557
Query: 586 VGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQ 645
VG+ PF P N R KR+ R +R DRY SDQG RG D
Sbjct: 558 VGM-APFMPPPPPPNN--RGTKREQRRPGGERGDRYETTSDQG--------SRGHDATGN 606
Query: 646 YQQEGSKANQEDQYGSRNFRNDESESEDE-APRRSR 680
EG+++ D+YG R+D+SES++E APRRSR
Sbjct: 607 SGAEGARSQSGDRYGRSALRDDDSESDEEAAPRRSR 642
>gi|168001521|ref|XP_001753463.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695342|gb|EDQ81686.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 981
Score = 493 bits (1268), Expect = e-136, Method: Compositional matrix adjust.
Identities = 263/451 (58%), Positives = 308/451 (68%), Gaps = 44/451 (9%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
MED++GGLSFDFEGGL+A + A P T A A+ N N PSS AAP +
Sbjct: 1 MEDADGGLSFDFEGGLEAA--VAAAGPP-----QTGAPQQASVNNNAQVPSSL-AAPKNQ 52
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
A R+++RQTVCRHWLR LCMKGDACGFLHQ+DK+RMPVCRFF FGECRE DC
Sbjct: 53 QA-------RKNYRQTVCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFAKFGECREPDC 105
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQ-QISSYNHGNPN 179
+YKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPPSV++ LQKIQ ++ + N
Sbjct: 106 IYKHTNEDIKECNMYKLGFCPNGPDCRYRHQKLPGPPPSVDQNLQKIQHRVYAPNTNGTT 165
Query: 180 KHFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQM 239
H + ++ S+G G G +TAE A + + Q Q
Sbjct: 166 THHGKH-------TPARNSEG------GQTGGRATAEEAQPPRSSRLPA-QLVAPQLPPA 211
Query: 240 QNLPNGL--PNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 297
+ NG P A PLP G RYFIVKS NRENLELSV++G+WAT R+NEAKLN+A
Sbjct: 212 SGMANGPIPPTSFPSIAAPLPLGYCRYFIVKSSNRENLELSVERGLWATHRNNEAKLNDA 271
Query: 298 FDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCE 357
FDS E+VI IFSVN TRHFQGCA+M SKIGG GGG WKYAHGTA+YGRNF +KWLKLCE
Sbjct: 272 FDSCEHVIFIFSVNETRHFQGCARMMSKIGGVAGGGAWKYAHGTANYGRNFRLKWLKLCE 331
Query: 358 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVA------ 411
LSF+KTRHLRN YNEN+PVKISRDCQELEPS+GEQLA LLY EPDS+LM + +
Sbjct: 332 LSFYKTRHLRNSYNENMPVKISRDCQELEPSVGEQLALLLYQEPDSDLMVLHLKYVLTQT 391
Query: 412 ----AEAKREEEKAKGVNPDNGGDNPDIVPF 438
+E KRE+E+A+G DI+PF
Sbjct: 392 LAKESEEKREDERARGAQEPE--QEADIIPF 420
>gi|449530857|ref|XP_004172408.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like, partial [Cucumis sativus]
Length = 331
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 232/337 (68%), Positives = 260/337 (77%), Gaps = 19/337 (5%)
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDI 435
++ISRDCQELEPS+GEQLA+LLYLEPD ELMA+SVAAE+KREEEKAKGVNPD G +NPDI
Sbjct: 1 LQISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDIGSENPDI 60
Query: 436 VPFEDNEEEEEEESEEEE-----ESLGTASQGRGRGRGMMWPGPMPLARGARPVPGMRGF 490
VPFEDNEEEEEEESEEEE +S G QGRGRGRGMMWP MP+ RGARP GM+GF
Sbjct: 61 VPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRGARPFHGMQGF 120
Query: 491 PPMMIGADGFSYG-VTPDGFPMPDLFGVAPRPFAPYGP--RFSGDFTGP-GGMMFPGRPP 546
PP M+G DG SYG VTPDGFPMPD+FG+ PR F PYGP RFSGDF GP MMF GRP
Sbjct: 121 PPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPRFSGDFMGPPTAMMFRGRPS 180
Query: 547 QPGSVFPPNGFGGMMMGPGRPPFMGGMGPAATNP-RGGRPVGVPPPFPNQPQ-SSQNSSR 604
QP ++FPP+GFG MMMG GR PFMGGMG A NP R GRPVGV P +P SSQN +R
Sbjct: 181 QPAAMFPPSGFG-MMMGQGRGPFMGGMGVAGANPARPGRPVGVSPLYPPPAVPSSQNMNR 239
Query: 605 AAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGS-RN 663
KRD RG NDR Y G DQ + E+ GR D+E+QY+Q GSKA ++QYG+
Sbjct: 240 TIKRDQRGLTNDR---YIVGMDQNKGVEIQSSGR--DEEMQYKQ-GSKAYSDEQYGTGTT 293
Query: 664 FRNDESESEDEAPRRSRHGEGKKKRRDSEGDAAASSD 700
FRN+ESESEDEAPRRSRHGEGKKKRR SEGDA A S+
Sbjct: 294 FRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISN 330
>gi|147801779|emb|CAN61344.1| hypothetical protein VITISV_022201 [Vitis vinifera]
Length = 299
Score = 348 bits (892), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 213/290 (73%), Positives = 236/290 (81%), Gaps = 15/290 (5%)
Query: 407 AISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDNEEEEEEESEEEE----ESLGTASQG 462
AIS+AAE+KREEEKAKGVNPDNGG+NPDIVPFEDNEEEEEEESEEEE ++LG A+QG
Sbjct: 17 AISLAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQG 76
Query: 463 RGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIGADGFSY-GVTPDGFPMPDLFGVAPRP 521
RGRGRG+MWP MPLARGARP+PGMRGFPP+M+GADGFSY V PDGF MPD+FGV PR
Sbjct: 77 RGRGRGIMWPPHMPLARGARPIPGMRGFPPVMMGADGFSYSAVPPDGFAMPDIFGVGPRA 136
Query: 522 FAPYGPRFSGDFTGPG-GMMFPGRPPQPGSVFPPNGFGGMMMGPGRPPFMGGMG-PAATN 579
F PYGPRFSGDFTGP GMMFPGR QPG+VFP +G+ GMMMGPGR PFMGGMG PAA
Sbjct: 137 FPPYGPRFSGDFTGPASGMMFPGR-GQPGAVFPASGY-GMMMGPGRAPFMGGMGVPAAAP 194
Query: 580 PRGGRPVGVPPPFPNQPQSSQNSSRAAKRDVRGSINDRNDRYSAGSDQGRAQEMGGPGRG 639
R GRPVG+PP FP P + ++ KRD R +NDRNDRYS GSDQGR Q+M G
Sbjct: 195 TRAGRPVGMPPMFPPPPPPNSQNTNRTKRDQRTPVNDRNDRYSGGSDQGRGQDMA----G 250
Query: 640 PDDEVQYQQEGSKANQEDQYGSRN-FRNDESESEDEAPRRSRHGEGKKKR 688
PDDE QY Q G K+ Q+DQ+G N FRNDESESEDEAPRRSRHGEGKKKR
Sbjct: 251 PDDETQYLQ-GLKSQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 299
>gi|6634766|gb|AAF19746.1|AC009917_5 Contains similarity to gb|U07224 a2 (IV) basement membrane collagen
from Brugia malayi [Arabidopsis thaliana]
Length = 335
Score = 306 bits (783), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 222/374 (59%), Positives = 252/374 (67%), Gaps = 46/374 (12%)
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MTS+IGG +GGGNWK+ HGTA YGRNFSVKWLKLCELSFHKTR+LRNPYNENLPVKISRD
Sbjct: 1 MTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELSFHKTRNLRNPYNENLPVKISRD 60
Query: 382 CQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPF--E 439
CQELEPS+GEQLA+LLYLEPDSELMAIS+AAEAKREEEKAKGVNP++ +NPDIVPF
Sbjct: 61 CQELEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEKAKGVNPESRAENPDIVPFEDN 120
Query: 440 DNEEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFPPMMIG-AD 498
+ EEEEE+ESEEEEES+ QGRGRGRG+MWP MPL RG RP+PGM GFP ++G D
Sbjct: 121 EEEEEEEDESEEEEESMAGGPQGRGRGRGIMWPPQMPLGRGIRPMPGMGGFPLGVMGPGD 180
Query: 499 GFSYGVTPDGFP-MPDLFGVAPRPFAPYGPRFSGDFTGP-GGMMFPGRPPQPGSVFPPNG 556
F YG P G+ MPD FG+ PRPF PYGPRF GDF GP GMMFPGRPPQ FP G
Sbjct: 181 AFPYG--PGGYNGMPDPFGMGPRPFGPYGPRFGGDFRGPVPGMMFPGRPPQ---QFPHGG 235
Query: 557 FGGMMMGPGRPPFMGGMGPAATNPRGGRPVGVPPPFPNQPQSSQNSSRAAKRDVRGSIND 616
+G M G MG PRGGRP+ PP + N + D RG D
Sbjct: 236 YGMMGGG-----RGPHMGGMGNAPRGGRPMYYPPATSSARPGPSNRKTPERSDERGVSGD 290
Query: 617 RNDRYSAGSDQGRAQEMGGPGRGPDDEVQYQQEGSKANQEDQYGSRNFRN--DESESEDE 674
Q Q+ S ++ + G+ + RN ESE EDE
Sbjct: 291 ----------------------------QQNQDASHDMEQFEVGN-SLRNEESESEDEDE 321
Query: 675 APRRSRHGEGKKKR 688
APRRSRHGEGKK+R
Sbjct: 322 APRRSRHGEGKKRR 335
>gi|145324080|ref|NP_001077629.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
gi|6634767|gb|AAF19747.1|AC009917_6 Contains similarity to gb|U96448 cleavage and polyadenylation
specificity factor 30 kDa from Bos taurus [Arabidopsis
thaliana]
gi|24415582|gb|AAN41459.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Arabidopsis thaliana]
gi|332193101|gb|AEE31222.1| cleavage and polyadenylation specificity factor CPSF30 [Arabidopsis
thaliana]
Length = 250
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 183/263 (69%), Gaps = 25/263 (9%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
MED++G LSFDFEGGLD+GP TAS P +++++AA + AP+ DH+
Sbjct: 1 MEDADG-LSFDFEGGLDSGPVQNTASVPVAPPENSSSAAV------NVAPTY-----DHS 48
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
SA V RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMP+CRFFRL+GECREQDC
Sbjct: 49 SATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQDC 108
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
VYKHTNEDIKECNMYKLGFCPNGPDCRYRH KLPGPPP VEEVLQKIQQ+++YN+G N+
Sbjct: 109 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYGT-NR 167
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ 240
+Q R D+ Q Q P + ES N+ QQQ Q Q Q + +
Sbjct: 168 LYQARNVAPQLQDRPQ-GQVPM--------QGQPQESGNLQQQQQQQPQQSQHQVSQTL- 217
Query: 241 NLPNGLPNQTNRNATPLPQGISR 263
+PN +QTNR + PLPQG++R
Sbjct: 218 -IPNP-ADQTNRTSHPLPQGVNR 238
>gi|413943365|gb|AFW76014.1| hypothetical protein ZEAMMB73_244879 [Zea mays]
Length = 251
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 127/272 (46%), Positives = 161/272 (59%), Gaps = 35/272 (12%)
Query: 1 MEDSEGGLSFDFEGGLDAGPG------MPTASNPAIQSDSTAAAAAAAANANHAAPSSSG 54
M+DS+GGLSFDFEGGLD+ P +P++++P
Sbjct: 1 MDDSDGGLSFDFEGGLDSAPASGGGGPVPSSTDPGAGVGGGGDGLGMHGRGRGRGSYR-- 58
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
QTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGE
Sbjct: 59 --------------------QTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGE 98
Query: 115 CREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYN 174
CRE DC YKH+ +D+KECNMYK+GFCPNGP+CRY+H+KLPGPPPSVEEVLQKI Q+ S+N
Sbjct: 99 CREPDCAYKHSYDDVKECNMYKMGFCPNGPNCRYKHIKLPGPPPSVEEVLQKILQMRSFN 158
Query: 175 HGNPNKHFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAE-SANVHQQQLVQQPQQQG 233
+ N++ ++HQ ++ Q QG NQ +A ++ + A Q Q + Q Q
Sbjct: 159 RYSQNRN----NNYNHQGERPQHPQGSGLPNQNSAENATAVDPPAGGQQAQTLNQQPPQQ 214
Query: 234 TQTTQMQNLPNGLPN--QTNRNATPLPQGISR 263
Q + G+ N Q R ATPLPQG SR
Sbjct: 215 QQKPNTNDQAQGVSNGHQATRIATPLPQGPSR 246
>gi|295913522|gb|ADG58009.1| transcription factor [Lycoris longituba]
Length = 153
Score = 226 bits (576), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/137 (78%), Positives = 117/137 (85%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
RRSFRQTVCRHWLRSLCMKGD+CGFLHQYDKSRMPVCRFFRL+GECREQDCVYKHTN+DI
Sbjct: 15 RRSFRQTVCRHWLRSLCMKGDSCGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNDDI 74
Query: 130 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFS 189
KECNMYKLGFCPNGPDCRYRHVKLPGPPP VEEV QKIQ +SSYN+G+ + ++
Sbjct: 75 KECNMYKLGFCPNGPDCRYRHVKLPGPPPPVEEVFQKIQHLSSYNYGSDRFFEHKNTGYN 134
Query: 190 HQTDKSQFSQGPNAVNQ 206
Q +K QF QG NQ
Sbjct: 135 QQGEKPQFPQGSTVANQ 151
>gi|413934440|gb|AFW68991.1| hypothetical protein ZEAMMB73_893936 [Zea mays]
Length = 246
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/272 (47%), Positives = 159/272 (58%), Gaps = 40/272 (14%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
M+D +GGLSFDFEGGLD+ P A P S A +
Sbjct: 1 MDDGDGGLSFDFEGGLDSAP---AAGGPVPSSTDPGAGGGDGPGMHGRGRGRGSYR---- 53
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
QTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGECRE DC
Sbjct: 54 --------------QTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDC 99
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
YKH+ +D+KECNMYK+GFCPNGP+CRY+H+KLPGPPPSVEEVLQKI Q+ S+N + N+
Sbjct: 100 AYKHSYDDVKECNMYKMGFCPNGPNCRYKHIKLPGPPPSVEEVLQKILQMRSFNRYSQNR 159
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSST---------AESANVHQQQLVQQPQQ 231
+ ++ Q ++ Q QG NQ +A ++ A++ N Q Q+P
Sbjct: 160 N----SNYNQQGERPQHPQGSALPNQNSAENATAAAPPAGGQQAQTLNQQPPQQQQKP-- 213
Query: 232 QGTQTTQMQNLPNGLPNQTNRNATPLPQGISR 263
Q Q + NG +Q R ATPLPQG SR
Sbjct: 214 --NTNDQAQGVSNG--HQATRIATPLPQGPSR 241
>gi|326529119|dbj|BAK00953.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 262
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 132/269 (49%), Positives = 159/269 (59%), Gaps = 34/269 (12%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
LSFDFEGGLD GP AA A +A +
Sbjct: 10 LSFDFEGGLDTGP-------------------AAGGLAPSSADAGGTGGGGPDGGGHGRG 50
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
GR S+RQTVCRHWLR LCMKGDACGFLHQ+DK+RMPVCRFFR +GECRE DC YKH+ +
Sbjct: 51 RGRGSYRQTVCRHWLRGLCMKGDACGFLHQFDKARMPVCRFFRDYGECREPDCAYKHSYD 110
Query: 128 DIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGA 187
D+KECNMYK+GFCPNGP+CRY+HVKLPGPPP VEEVL KI Q+ S N N+H +
Sbjct: 111 DVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLAKILQMRSSNFNKFNQH--RNNN 168
Query: 188 FSHQTDK-------------SQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGT 234
++ Q D+ S + +A+ A ++ T +QQ VQQ QQ+
Sbjct: 169 YNQQGDRPRPPPASGLPNQNSTDNATASAMQPAAGQQAQTMNQQPQQKQQQVQQQQQKPN 228
Query: 235 QTTQMQNLPNGLPNQTNRNATPLPQGISR 263
Q+Q +PNG NQ R ATPLPQG SR
Sbjct: 229 TNDQVQGVPNGSSNQPTRLATPLPQGSSR 257
>gi|190899694|gb|ACE98360.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 85/88 (96%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H+GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 30 PADIHAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 89
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRH 150
KHTNEDIKECNMYKLGFCPNGPDCRYRH
Sbjct: 90 KHTNEDIKECNMYKLGFCPNGPDCRYRH 117
>gi|190899688|gb|ACE98357.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899692|gb|ACE98359.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899696|gb|ACE98361.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899700|gb|ACE98363.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899702|gb|ACE98364.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899704|gb|ACE98365.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899708|gb|ACE98367.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899710|gb|ACE98368.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899712|gb|ACE98369.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899714|gb|ACE98370.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899720|gb|ACE98373.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899722|gb|ACE98374.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899724|gb|ACE98375.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899726|gb|ACE98376.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899728|gb|ACE98377.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899730|gb|ACE98378.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899732|gb|ACE98379.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899734|gb|ACE98380.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 82/88 (93%), Positives = 84/88 (95%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P +GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 30 PADIQAGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 89
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRH 150
KHTNEDIKECNMYKLGFCPNGPDCRYRH
Sbjct: 90 KHTNEDIKECNMYKLGFCPNGPDCRYRH 117
>gi|190899698|gb|ACE98362.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899706|gb|ACE98366.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
gi|190899716|gb|ACE98371.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 81/88 (92%), Positives = 83/88 (94%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P +GRRSFRQTVCRHWLRSLCMKGDACG LHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 30 PADIQAGRRSFRQTVCRHWLRSLCMKGDACGCLHQYDKSRMPVCRFFRLYGECREQDCVY 89
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRH 150
KHTNEDIKECNMYKLGFCPNGPDCRYRH
Sbjct: 90 KHTNEDIKECNMYKLGFCPNGPDCRYRH 117
>gi|190899718|gb|ACE98372.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 181 bits (460), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 81/88 (92%), Positives = 83/88 (94%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P +GRRSFRQTVCRH LRSLCMKGDACGFLHQYDKSRMPVCRFFRL+GECREQDCVY
Sbjct: 30 PADIQAGRRSFRQTVCRHRLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVY 89
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRH 150
KHTNEDIKECNMYKLGFCPNGPDCRYRH
Sbjct: 90 KHTNEDIKECNMYKLGFCPNGPDCRYRH 117
>gi|190899690|gb|ACE98358.1| C-x8-C-x5-C-x3-H type Zn-finger [Populus tremula]
Length = 118
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 80/88 (90%), Positives = 82/88 (93%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P +GRRSFRQTVCRHWLRSLCMKGDACG LHQYDKSRMPVCRF RL+GECREQDCVY
Sbjct: 30 PADIQAGRRSFRQTVCRHWLRSLCMKGDACGCLHQYDKSRMPVCRFSRLYGECREQDCVY 89
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRH 150
KHTNEDIKECNMYKLGFCPNGPDCRYRH
Sbjct: 90 KHTNEDIKECNMYKLGFCPNGPDCRYRH 117
>gi|412989291|emb|CCO15882.1| predicted protein [Bathycoccus prasinos]
Length = 218
Score = 162 bits (411), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 86/115 (74%)
Query: 44 NANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRM 103
N + AP A + ++++RQTVCRHWLR+LCMKGD CGFLHQ+DK RM
Sbjct: 11 NLEQTDLKTQTLAPTLAPSDQLEPRAQKNYRQTVCRHWLRNLCMKGDKCGFLHQFDKERM 70
Query: 104 PVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPP 158
P CR+F +GEC+E DC YKH+N+D+KECNMYKLGFC +GP+CRY+H++LPGP P
Sbjct: 71 PTCRYFAKYGECKEPDCPYKHSNDDVKECNMYKLGFCIHGPNCRYKHIRLPGPAP 125
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/389 (28%), Positives = 181/389 (46%), Gaps = 42/389 (10%)
Query: 53 SGAAPDHASAPVPHHSGRRSFRQ--TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFR 110
+GA A H + ++ F++ VCRHWLR+LCMKGD C FLHQYD S+MP CR+
Sbjct: 38 NGAVVGVGGATFGHQAAKKDFKRGTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGM 97
Query: 111 LFGECREQDCVYKHT-NEDIKECNMYKLGFCPNGPDCRYRHVKLPGP--PPSVEEVLQ-- 165
EC+ +C ++H +E+ EC YK GFC +G CRYRH+KL P + + LQ
Sbjct: 98 ---ECQVPECPFRHVPDEERVECAFYKQGFCSHGSSCRYRHIKLAREECPETADFALQAK 154
Query: 166 ----------KIQQISSYNHGNPNKHFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTA 215
K Q ++ + KH+++ G+ D+ F+ G + G+
Sbjct: 155 VADEENVKRRKAQPVNEFFKIAICKHWEKMGSCPF-GDECHFAHGETELRPFPKGEKEEK 213
Query: 216 ESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENL 275
E+ + + G Q P +++YF+++S + NL
Sbjct: 214 EA---------RAGRPGGHQGPAFNGGDRPHQGPPPGPQLPDDGKMAKYFLLQSASYLNL 264
Query: 276 ELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMT--------SKIG 327
SV WA + ++ A ++++ V L F+V ++H+QG A++ + G
Sbjct: 265 AHSVHHERWAVPPAVLQQIKMASETSDEVFLFFAVGPSKHYQGVARLVNGAMSSADASAG 324
Query: 328 GSVGGGNWKY-AHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 386
+ G Y A G A + +F ++WL++CE + + N+ L V + QEL+
Sbjct: 325 EDLAAGVVPYEADGKAEWAGSFGIEWLRICECPWERLAQFE---NKQLAVSECPNGQELD 381
Query: 387 PSIGEQLAALLYLEPDSELMAISVAAEAK 415
G L LL+ +P +L SV E+K
Sbjct: 382 AETGHALVRLLFNQPQIQLHYRSVEDESK 410
>gi|145346398|ref|XP_001417675.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577903|gb|ABO95968.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 82
Score = 153 bits (387), Expect = 3e-34, Method: Composition-based stats.
Identities = 60/82 (73%), Positives = 73/82 (89%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
R+++RQTVCRHWLR+LCMKG+ACGFLHQ+DKSRMP CRFF +GEC+E DC YKH+ ED+
Sbjct: 1 RKNYRQTVCRHWLRNLCMKGNACGFLHQFDKSRMPTCRFFAKYGECKEPDCPYKHSLEDM 60
Query: 130 KECNMYKLGFCPNGPDCRYRHV 151
K+CNMYKLGFC +G CR+RHV
Sbjct: 61 KDCNMYKLGFCIHGSLCRFRHV 82
>gi|302832461|ref|XP_002947795.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
gi|300267143|gb|EFJ51328.1| hypothetical protein VOLCADRAFT_103576 [Volvox carteri f.
nagariensis]
Length = 652
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 64/94 (68%), Positives = 76/94 (80%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
R++FR+TVC +WLR LCMKGDACGFLHQ+ RMPVCR +GEC +QDC YKH+ ++I
Sbjct: 149 RKNFRKTVCTYWLRGLCMKGDACGFLHQFVSDRMPVCRNLLKYGECHDQDCPYKHSLDEI 208
Query: 130 KECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEV 163
KECNMYKLGFC GP CRY+H+K PGPPP EEV
Sbjct: 209 KECNMYKLGFCIYGPVCRYKHIKNPGPPPDPEEV 242
>gi|326517990|dbj|BAK07247.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 152 bits (384), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 93/247 (37%), Positives = 121/247 (48%), Gaps = 29/247 (11%)
Query: 1 MEDSEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHA 60
M+ EG L FDFE LDA A + + +A++ P + G + H
Sbjct: 96 MDGDEGSLRFDFEDYLDA---------------VGAGSGSMSASSEAPIPVTKGLSHGHR 140
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
R F+QTVC+HWLR LC K + C FLHQ+D MPVC F F C +DC
Sbjct: 141 ---------RVIFQQTVCQHWLRGLCKKAEPCSFLHQFDMDHMPVCHFHHAFRFCCAEDC 191
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNK 180
KH +I+ C M+ +GFCPNGP+C Y HV+LPGPPP V+EVLQK QQ ++YN G +
Sbjct: 192 NLKH---EIQVCEMFSVGFCPNGPNCNYMHVRLPGPPPPVQEVLQKFQQTNAYNCGPSSG 248
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQ--PQQQGTQTTQ 238
+Q R Q K+Q G NQ A ++ Q P Q Q
Sbjct: 249 TYQPRDNNCKQKAKAQVQHGSVLNNQNLAVNATLVAQQPAAQHAQTANPAPHLQQKQNAH 308
Query: 239 MQNLPNG 245
+Q NG
Sbjct: 309 VQGFHNG 315
>gi|156088693|ref|XP_001611753.1| YT521-B-like family protein [Babesia bovis]
gi|154799007|gb|EDO08185.1| YT521-B-like family protein [Babesia bovis]
Length = 427
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 113/425 (26%), Positives = 182/425 (42%), Gaps = 59/425 (13%)
Query: 21 GMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRH 80
G + P ++ + + A + + ++ + A + + G+ S VCRH
Sbjct: 14 GEKSVEAPKVRKCNVLMSLALSVVKRESEKAALLKLKGYERADIERNRGKHS---VVCRH 70
Query: 81 WLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYKLGFC 140
WL+ +CMKG+ C FLHQ SRMP CR F K GFC
Sbjct: 71 WLKGMCMKGEFCDFLHQLVYSRMPPCRLFE-------------------------KNGFC 105
Query: 141 PNGP--DCRYRHV-----KLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQR------GA 187
+ +C ++H+ + P ++E + + +H F
Sbjct: 106 IDNQRGNCIFQHIVEQPESITAQDPRIKEAIANGINFAEISHETDPDGFATAFILAVASV 165
Query: 188 FSHQTDKSQFSQG----PNAVN-----QGAAGKSSTAESANVHQQQLVQQ--PQQQGTQT 236
F TD + + P V+ + A ++S E + + ++ P +
Sbjct: 166 FPKITDCAIMEEAIPPSPQPVDMLDPVEAVATEASIPEDSRIDDAPVISASIPGLLKFDS 225
Query: 237 TQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
M + L + + N+ ++ F++KS N N+ S+ G+WAT +N AKL
Sbjct: 226 ASMIDADRRLHSSFDVNSKN-----TKCFMIKSNNMMNIYFSICYGIWATGINNTAKLIN 280
Query: 297 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLC 356
AF S E+VILIFS N + FQG A+M + + G W + G NF VKW+K C
Sbjct: 281 AFQSCEHVILIFSGNESGGFQGYARMMTLPISGLYKGIW--GSFQSRLGDNFRVKWIKQC 338
Query: 357 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
+ F RH+ N YN+NLP+K SRD EL + E + L+ PD +L+ + A +R
Sbjct: 339 SVEFEVLRHVTNQYNQNLPLKKSRDGTELPLDVAEIICNTLWNAPDDDLLKGTPMATWER 398
Query: 417 EEEKA 421
+ K
Sbjct: 399 IDHKT 403
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 111/362 (30%), Positives = 165/362 (45%), Gaps = 41/362 (11%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT-NEDIKECNM 134
VCRHWLR LCMKGD+C FLHQYD S+MP CR+ EC+ +C ++H +ED EC
Sbjct: 62 VVCRHWLRGLCMKGDSCEFLHQYDMSKMPECRWGM---ECQVPECPFRHVPDEDRMECAF 118
Query: 135 YKLGFCPNGPDCRYRHVKLPGP--PPSVEEVLQ------------KIQQISSYNHGNPNK 180
Y+ GFC +GP+CRYRH+KL P + + LQ K Q ++ + K
Sbjct: 119 YRQGFCSHGPNCRYRHIKLAREECPETADFALQSKVAEEENVKRRKTQPVNEFYKIAICK 178
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQ 240
H+++ G+ D+ F+ G + + ++ AES Q+ G T
Sbjct: 179 HWEKLGSCPF-GDECHFAHGDQEL-RPFPRQNERAESVGF---------QKPGASDTFPI 227
Query: 241 NLPNG-LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 299
N P+ +P Q + P YFI+ S + N+ SV W S +L E
Sbjct: 228 NEPSHPIPFQEPQPRLPDADRNCAYFILHSFSYHNIAHSVHYHQWTLTDSPLQQLREIAG 287
Query: 300 SAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRN--------FSVK 351
S + V L +V +RHFQG ++T I + A G Y + F V+
Sbjct: 288 SYDVVFLFITVTSSRHFQGVVRVTKDIIQRLPSCGEDLASGIVPYQTDKRSSWEGVFPVE 347
Query: 352 WLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVA 411
WL++CE + + + Y L V + LE G + +L+ +P +L SV
Sbjct: 348 WLRICECPWEFFESIASKY---LFVPNAPKLIPLETDQGRKCMHILFSQPQIQLHYKSVE 404
Query: 412 AE 413
E
Sbjct: 405 DE 406
>gi|168022294|ref|XP_001763675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685168|gb|EDQ71565.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 690
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/137 (52%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS N N+E S+++G+WATQ NE LNEAF+++E V+L+FSVN + HFQG A
Sbjct: 285 TRYFIIKSLNHHNIEKSIEKGIWATQAMNETVLNEAFETSEKVVLVFSVNMSSHFQGYAL 344
Query: 322 MTSKIGGSVGGGNWKYAHGTAH-YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
M+S IG W A+ A+ +G F V+WL+L +L F KT HL+NP N PVKISR
Sbjct: 345 MSSPIGQR-RANIWSEANEGANPWGGTFHVEWLRLYDLPFQKTVHLKNPLNAFKPVKISR 403
Query: 381 DCQELEPSIGEQLAALL 397
DCQEL +IG+ L AL+
Sbjct: 404 DCQELTQAIGKALCALI 420
>gi|356497191|ref|XP_003517446.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
Length = 396
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 112/174 (64%), Gaps = 11/174 (6%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+YFI+KS N +N+ LS+++G+WATQ NE L EAF ++ +VILIFSVN + FQG A+M
Sbjct: 71 KYFIIKSLNHQNIHLSIEKGIWATQIMNEPILEEAFHNSGSVILIFSVNMSGSFQGYAQM 130
Query: 323 TSKIGGSVGGGN-WKYAHGTAH-YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
S IG G N W G ++ +GR+F VKW+ L +L FHKT HL+NP N+ PVKISR
Sbjct: 131 MSSIGR--GRDNVWSEGTGKSNPWGRSFKVKWMCLNDLPFHKTLHLKNPLNDYKPVKISR 188
Query: 381 DCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV---NPDNGGD 431
DCQEL P IG L LL + ++ + S++ R+E KG+ P + GD
Sbjct: 189 DCQELSPDIGLALCELLDGKNYTDCLPTSLS----RDEFSLKGLYANTPSSMGD 238
>gi|303274592|ref|XP_003056614.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462698|gb|EEH59990.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/95 (61%), Positives = 76/95 (80%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
+ R+++RQTVCRHWLR LCMKG+ CGFLHQ+DK RMP CRFF + EC+E DC +KH+ E
Sbjct: 31 NARKNYRQTVCRHWLRGLCMKGNHCGFLHQFDKQRMPTCRFFAKYSECKEPDCPFKHSLE 90
Query: 128 DIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEE 162
D+K+CNM+KLGFC +GP+CRYRH + PS+ +
Sbjct: 91 DVKDCNMFKLGFCIHGPNCRYRHPRSSSEHPSISD 125
>gi|224054017|ref|XP_002298082.1| predicted protein [Populus trichocarpa]
gi|222845340|gb|EEE82887.1| predicted protein [Populus trichocarpa]
Length = 398
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 98/147 (66%), Gaps = 2/147 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS N+ N++LS++ G+WATQ NE L EAF ++ VILI+SVN + FQG A+
Sbjct: 68 TRYFIIKSLNQHNIQLSIENGIWATQVRNEPILEEAFHNSGRVILIYSVNMSGFFQGYAQ 127
Query: 322 MTSKIGGSVGGGNWKYAHGTAH-YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
M S +G W G ++ +GR+F VKWL+L +L F KT HL+NP N+ PVKISR
Sbjct: 128 MISSVGWR-HDNLWSEGSGKSNPWGRSFKVKWLRLNDLPFQKTLHLKNPLNDYKPVKISR 186
Query: 381 DCQELEPSIGEQLAALLYLEPDSELMA 407
DCQEL IGE L L+ E D++ M
Sbjct: 187 DCQELPEDIGEALCELIDGERDTDGMV 213
>gi|359474272|ref|XP_002275532.2| PREDICTED: uncharacterized protein LOC100254803 [Vitis vinifera]
Length = 404
Score = 143 bits (361), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 92/136 (67%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS N N++LS+++G+WATQ NE L EAF ++ VILIFSVN + FQG A+
Sbjct: 70 TRYFIIKSLNHHNIQLSMEKGIWATQVMNEPILEEAFHNSGKVILIFSVNMSGFFQGYAQ 129
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M S +G + + G +GR+F VKWL+L +L F KT HL+NP N+ PVKISRD
Sbjct: 130 MMSSVGWRRDNVWSQGSGGNNPWGRSFKVKWLRLHDLPFQKTLHLKNPLNDYKPVKISRD 189
Query: 382 CQELEPSIGEQLAALL 397
CQEL IGE L LL
Sbjct: 190 CQELSQEIGEALCELL 205
>gi|297742631|emb|CBI34780.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/136 (52%), Positives = 92/136 (67%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS N N++LS+++G+WATQ NE L EAF ++ VILIFSVN + FQG A+
Sbjct: 70 TRYFIIKSLNHHNIQLSMEKGIWATQVMNEPILEEAFHNSGKVILIFSVNMSGFFQGYAQ 129
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M S +G + + G +GR+F VKWL+L +L F KT HL+NP N+ PVKISRD
Sbjct: 130 MMSSVGWRRDNVWSQGSGGNNPWGRSFKVKWLRLHDLPFQKTLHLKNPLNDYKPVKISRD 189
Query: 382 CQELEPSIGEQLAALL 397
CQEL IGE L LL
Sbjct: 190 CQELSQEIGEALCELL 205
>gi|255071081|ref|XP_002507622.1| predicted protein [Micromonas sp. RCC299]
gi|226522897|gb|ACO68880.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNM 134
QTVCRHWLR LCMKG+ CGFLHQ+DK RMP CRFF + ECRE DC +KH+ ED+K+CNM
Sbjct: 49 QTVCRHWLRGLCMKGNGCGFLHQFDKRRMPTCRFFAKYNECREPDCPFKHSLEDVKDCNM 108
Query: 135 YKLGFCPNGPDCRYRHVKLPGPP-PSVEEVL 164
+KLGFC +G CRYRH L PP P+ E L
Sbjct: 109 FKLGFCIHGKLCRYRHASLKAPPMPTFEAAL 139
>gi|297809507|ref|XP_002872637.1| hypothetical protein ARALYDRAFT_490016 [Arabidopsis lyrata subsp.
lyrata]
gi|297318474|gb|EFH48896.1| hypothetical protein ARALYDRAFT_490016 [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 98/154 (63%), Gaps = 16/154 (10%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
N+N+ P Q +RYFI+KS N +N+++SV++G+WATQ NE L AF + VILIFSV
Sbjct: 63 NKNSKPGYQ--TRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGRVILIFSV 120
Query: 311 NRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAH-------YGRNFSVKWLKLCELSFHKT 363
N + FQG A+M S +G W+ H + +GR+F VKWL+L EL F KT
Sbjct: 121 NMSGFFQGYAEMLSPVG-------WRRDHIWSQGGGKNNPWGRSFKVKWLRLSELPFQKT 173
Query: 364 RHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
HL+NP N+ PVKISRDCQEL IGE L LL
Sbjct: 174 LHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207
>gi|356540480|ref|XP_003538717.1| PREDICTED: YTH domain-containing protein 1-like [Glycine max]
Length = 368
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 96/139 (69%), Gaps = 6/139 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
++YF++KS N +N+ LS+++G+WATQ NE L EA+ ++ +VILIFSVN + FQG A+
Sbjct: 70 TKYFVIKSLNHQNIHLSIEKGIWATQIMNEPILQEAYHNSGSVILIFSVNMSGSFQGYAQ 129
Query: 322 MTSKIGGSVGGGNWKYAHGTAH---YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
M + IG G + ++ GT +GR+F VKWL L +L FHKT HL+NP N+ PVKI
Sbjct: 130 MMTSIGR---GRDNAWSEGTGKSNPWGRSFKVKWLCLNDLPFHKTLHLKNPLNDYKPVKI 186
Query: 379 SRDCQELEPSIGEQLAALL 397
SRDCQEL P IG L LL
Sbjct: 187 SRDCQELSPDIGLALCKLL 205
>gi|42572881|ref|NP_974537.1| YT521-B-like protein [Arabidopsis thaliana]
gi|4586102|emb|CAB40938.1| putative protein [Arabidopsis thaliana]
gi|7267898|emb|CAB78240.1| putative protein [Arabidopsis thaliana]
gi|50198805|gb|AAT70436.1| At4g11970 [Arabidopsis thaliana]
gi|52421293|gb|AAU45216.1| At4g11970 [Arabidopsis thaliana]
gi|332657677|gb|AEE83077.1| YT521-B-like protein [Arabidopsis thaliana]
Length = 359
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 15/165 (9%)
Query: 240 QNLPNGLPN-QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298
+N P+ L + + N+N+ P + +RYFI+KS N +N+++SV++G+WATQ NE L AF
Sbjct: 51 RNFPDQLESAKANKNSKPGYR--TRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAF 108
Query: 299 DSAENVILIFSVNRTRHFQGCAKMTSKIGG------SVGGGNWKYAHGTAHYGRNFSVKW 352
+ VILIFSVN + FQG A+M S +G S GGG +GR+F VKW
Sbjct: 109 HKSGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIWSQGGGK------NNPWGRSFKVKW 162
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L+L EL F KT HL+NP N+ PVKISRDCQEL IGE L LL
Sbjct: 163 LRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207
>gi|307104178|gb|EFN52433.1| hypothetical protein CHLNCDRAFT_138954 [Chlorella variabilis]
Length = 233
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 69/93 (74%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
R++RQTVC +WLR LCMKGD CGFLHQ+D RMPVCR FG C+E DC YKHT E IK
Sbjct: 39 RNYRQTVCTYWLRGLCMKGDTCGFLHQFDPERMPVCRSLLKFGVCKEPDCPYKHTLEAIK 98
Query: 131 ECNMYKLGFCPNGPDCRYRHVKLPGPPPSVEEV 163
ECNMYKLGFC GP CR++H + PPP E +
Sbjct: 99 ECNMYKLGFCIYGPACRFKHTRQLAPPPDPETL 131
>gi|334186446|ref|NP_001190703.1| YT521-B-like protein [Arabidopsis thaliana]
gi|332657678|gb|AEE83078.1| YT521-B-like protein [Arabidopsis thaliana]
Length = 385
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 15/165 (9%)
Query: 240 QNLPNGLPN-QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298
+N P+ L + + N+N+ P + +RYFI+KS N +N+++SV++G+WATQ NE L AF
Sbjct: 51 RNFPDQLESAKANKNSKPGYR--TRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAF 108
Query: 299 DSAENVILIFSVNRTRHFQGCAKMTSKIGG------SVGGGNWKYAHGTAHYGRNFSVKW 352
+ VILIFSVN + FQG A+M S +G S GGG +GR+F VKW
Sbjct: 109 HKSGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIWSQGGGK------NNPWGRSFKVKW 162
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L+L EL F KT HL+NP N+ PVKISRDCQEL IGE L LL
Sbjct: 163 LRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207
>gi|255537209|ref|XP_002509671.1| splicing factor yt521-B, putative [Ricinus communis]
gi|223549570|gb|EEF51058.1| splicing factor yt521-B, putative [Ricinus communis]
Length = 358
Score = 140 bits (352), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 95/143 (66%), Gaps = 14/143 (9%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS N N++LSV++G+WATQ NE L EAF ++ VILIFS+N + FQG A+
Sbjct: 68 TRYFIIKSLNHHNIQLSVEKGIWATQVMNEPILEEAFHNSGKVILIFSINMSGFFQGYAQ 127
Query: 322 MTSKIGGSVGGGNWK----YAHGTAH---YGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
M S +G W+ ++ G + +GR+F VKWL+L +L F KT HL+NP N+
Sbjct: 128 MMSTVG-------WRRDNIWSQGCSKNNPWGRSFRVKWLQLNDLPFQKTLHLKNPLNDYK 180
Query: 375 PVKISRDCQELEPSIGEQLAALL 397
PVKISRDCQEL IGE L L+
Sbjct: 181 PVKISRDCQELPEDIGEALCELI 203
>gi|42566517|ref|NP_192934.2| YT521-B-like protein [Arabidopsis thaliana]
gi|332657676|gb|AEE83076.1| YT521-B-like protein [Arabidopsis thaliana]
Length = 444
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 105/165 (63%), Gaps = 15/165 (9%)
Query: 240 QNLPNGLPN-QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 298
+N P+ L + + N+N+ P + +RYFI+KS N +N+++SV++G+WATQ NE L AF
Sbjct: 51 RNFPDQLESAKANKNSKPGYR--TRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAF 108
Query: 299 DSAENVILIFSVNRTRHFQGCAKMTSKIGG------SVGGGNWKYAHGTAHYGRNFSVKW 352
+ VILIFSVN + FQG A+M S +G S GGG +GR+F VKW
Sbjct: 109 HKSGRVILIFSVNMSGFFQGYAEMLSPVGWRRDQIWSQGGGK------NNPWGRSFKVKW 162
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L+L EL F KT HL+NP N+ PVKISRDCQEL IGE L LL
Sbjct: 163 LRLSELPFQKTLHLKNPLNDYKPVKISRDCQELPEDIGEALCELL 207
>gi|413943364|gb|AFW76013.1| hypothetical protein ZEAMMB73_244879 [Zea mays]
Length = 118
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 67/140 (47%), Positives = 81/140 (57%), Gaps = 28/140 (20%)
Query: 1 MEDSEGGLSFDFEGGLDAGPG------MPTASNPAIQSDSTAAAAAAAANANHAAPSSSG 54
M+DS+GGLSFDFEGGLD+ P +P++++P
Sbjct: 1 MDDSDGGLSFDFEGGLDSAPASGGGGPVPSSTDPGAGVGGGGDGLGMHGRGRGRGSYR-- 58
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
QTVCRHWLR LCMKG+ACGFLHQ+DK+RMPVCRFFR FGE
Sbjct: 59 --------------------QTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGE 98
Query: 115 CREQDCVYKHTNEDIKECNM 134
CRE DC YKH+ +D+KECNM
Sbjct: 99 CREPDCAYKHSYDDVKECNM 118
>gi|219130928|ref|XP_002185604.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum
CCAP 1055/1]
gi|217402944|gb|EEC42902.1| hypothetical protein PHATRDRAFT_50624 [Phaeodactylum tricornutum
CCAP 1055/1]
Length = 603
Score = 135 bits (341), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/363 (28%), Positives = 164/363 (45%), Gaps = 54/363 (14%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE-CREQDCVYKHTNE-DIK 130
R VCRHWLR LCMKG AC FLHQYD S+MP+CR GE C+ +DC ++H +E +
Sbjct: 66 LRTVVCRHWLRDLCMKGTACEFLHQYDLSKMPLCR----HGERCKIKDCPFRHISEANRM 121
Query: 131 ECNMYKLGFCPNGPDCRYRHVKLPGPP-PSVEEVLQKIQQISSYNHG---------NPN- 179
EC Y GFC +GP CRY+H++ P+V + + Q+ + G PN
Sbjct: 122 ECVFYSQGFCIHGPFCRYKHIRRAREDLPAVADFTLGLSQMQASKDGEKVTKRTAPKPNE 181
Query: 180 -------KHFQQRGA-------FSH-QTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQ 224
KHF Q F+H +++ +F + +G G T ++ V+Q
Sbjct: 182 FYKISLCKHFLQGSCPFAENCHFAHGESELRKFPRKDENEEEGDGGDELT-DNMFVNQDT 240
Query: 225 LVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVW 284
Q G N P P+Q ++++IV++ +L +S Q W
Sbjct: 241 TTIDYFQGGASGGGKPN-PILEPDQ------------AKFYIVRAATHHDLAISTVQNEW 287
Query: 285 ATQRSNEAKLNEAF-DSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAH 343
QR + +N A+ D V++ F+V+ + H QG A +T+ G +G
Sbjct: 288 YLQRKHAQAMNAAYQDGKHQVMIFFTVSDSNHIQGAALLTAP-----GVYQKSSDNGKDP 342
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDS 403
+ S++W + EL + + + LP ++ CQ++ + GE L ++ P
Sbjct: 343 FCHRISLEWFRTTELPIETALGVAS--DLLLPTSSTQYCQDMSSTTGESLMKAIWNAPLV 400
Query: 404 ELM 406
L
Sbjct: 401 TLF 403
>gi|302756121|ref|XP_002961484.1| hypothetical protein SELMODRAFT_77664 [Selaginella moellendorffii]
gi|300170143|gb|EFJ36744.1| hypothetical protein SELMODRAFT_77664 [Selaginella moellendorffii]
Length = 152
Score = 134 bits (336), Expect = 2e-28, Method: Composition-based stats.
Identities = 71/149 (47%), Positives = 96/149 (64%), Gaps = 2/149 (1%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N +NL SV++GVWAT NE LNEAF ++E V+L+FSVN + HFQG A+M
Sbjct: 1 RYFIIKSLNHQNLSKSVERGVWATPAVNEDILNEAFQTSERVVLVFSVNMSGHFQGYAEM 60
Query: 323 TSKIGGSVGGGNWKYAH-GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
TS+ G W A+ G++ +G FSV WLKL +L F +T HL+NP ++N PVKIS+D
Sbjct: 61 TSR-PGRRKDNLWNDANDGSSPWGGVFSVDWLKLHDLPFQETSHLKNPLDDNKPVKISKD 119
Query: 382 CQELEPSIGEQLAALLYLEPDSELMAISV 410
CQ L + L +L S +S+
Sbjct: 120 CQVLCLLCSHVIVILFFLGTSSRSWGVSL 148
>gi|387219107|gb|AFJ69262.1| hypothetical protein NGATSA_3006800, partial [Nannochloropsis
gaditana CCMP526]
Length = 317
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 4/144 (2%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
Q R+F++KS N +NL SV++GVW T R+NE LNEAF + + V+L +SVN + H+QG
Sbjct: 124 QARVRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFYSVNESGHWQG 183
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAH----YGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
A MTS I + H + FS++WL+L L F TR LRNP N+NL
Sbjct: 184 AAVMTSPIRSQQQPPHLPPLQMLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNL 243
Query: 375 PVKISRDCQELEPSIGEQLAALLY 398
P+ SRDCQEL P IG QL L+Y
Sbjct: 244 PISRSRDCQELTPEIGRQLLYLIY 267
>gi|302776052|ref|XP_002971322.1| hypothetical protein SELMODRAFT_95116 [Selaginella moellendorffii]
gi|300161304|gb|EFJ27920.1| hypothetical protein SELMODRAFT_95116 [Selaginella moellendorffii]
Length = 150
Score = 127 bits (318), Expect = 2e-26, Method: Composition-based stats.
Identities = 65/122 (53%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N +NL SV++GVWAT NE LNEAF ++E V+L+FSVN + +FQG A+M
Sbjct: 1 RYFIIKSLNHQNLSKSVERGVWATPAVNEDILNEAFQTSERVVLVFSVNMSGYFQGYAEM 60
Query: 323 TSKIGGSVGGGNWKYAH-GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
TS+ G W A+ G++ +G FSV WLKL +L F +T HL+NP ++N PVKIS+D
Sbjct: 61 TSR-PGRRKDNLWNDANDGSSPWGGVFSVDWLKLHDLPFQETSHLKNPLDDNKPVKISKD 119
Query: 382 CQ 383
CQ
Sbjct: 120 CQ 121
>gi|74146224|dbj|BAE24242.1| unnamed protein product [Mus musculus]
Length = 155
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
+++ +P P RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV
Sbjct: 2 SKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSV 61
Query: 311 NRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPY 370
+ HFQG ++M+S+IG +W G+A G F V+W++ L F HL NP+
Sbjct: 62 QGSGHFQGFSRMSSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPW 116
Query: 371 NENLPVKISRDCQELEPSIGEQLAAL 396
N+N V+ISRD QELEP +GEQL L
Sbjct: 117 NDNKKVQISRDGQELEPQVGEQLLQL 142
>gi|157127743|ref|XP_001661159.1| splicing factor yt521-b [Aedes aegypti]
gi|108882333|gb|EAT46558.1| AAEL002272-PA [Aedes aegypti]
Length = 594
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 112/226 (49%), Gaps = 16/226 (7%)
Query: 208 AAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGIS----- 262
+ G ++T S ++ + PQ T T + N N + +N+ ++
Sbjct: 102 SGGNATTNNSTKKERKSRSRSPQASSTADTSTETKRNRTKNSSVKNSAKSYDYVTKINYL 161
Query: 263 ----RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
R+F++KS N EN+ +S +GVW+T NEA LN+AF + NVIL+FSV + F G
Sbjct: 162 FRETRFFLIKSNNTENVTISKTKGVWSTLPPNEANLNQAFRESRNVILVFSVKESGKFAG 221
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A+M ++ + W G + G + W+ EL F T HL NP+NEN PV
Sbjct: 222 FARMAAEARRDLPAVEWVLPPGMSAKALGGVIKIDWVCKKELPFTSTTHLYNPWNENKPV 281
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
KI RD QE+EP + E+L L E A+ + K+ +E +K
Sbjct: 282 KIGRDGQEIEPKVAEELCRLF-----PEDTAVEMTPILKKSKEASK 322
>gi|349603958|gb|AEP99642.1| putative ATP-dependent RNA helicase YTHDC2-like protein, partial
[Equus caballus]
Length = 274
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 134 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 193
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N++ V+ISRD
Sbjct: 194 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDHKKVQISRDG 248
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 249 QELEPQVGEQLLQL 262
>gi|399218849|emb|CCF75736.1| unnamed protein product [Babesia microti strain RI]
Length = 379
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 147/339 (43%), Gaps = 76/339 (22%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI 129
RR VCRHWL+++CMKG+ C FLHQ SRMP C +
Sbjct: 70 RRGKHSVVCRHWLKNMCMKGEFCDFLHQLVYSRMPPCTIYG------------------- 110
Query: 130 KECNMYKLGFCPNGP--DCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGA 187
K+G+CP+ C +H+K V+E+ + S H
Sbjct: 111 ------KIGYCPDERRGQCTMKHIK----DDKVDELSGSDEDTSDVEH------------ 148
Query: 188 FSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLP 247
G+ T+ A H+ V+ + + + + NG P
Sbjct: 149 ---------------------KGEQDTSSFAEFHR--FVRAVKTSNCDKSGIWGIWNG-P 184
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307
N++ P + FIVKS N+ S+ GVWAT +N + +AF +++VI++
Sbjct: 185 NES-------PSHRIKCFIVKSAQIINIYYSIVYGVWATGPANTKRFADAFAESDHVIIV 237
Query: 308 FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR 367
FS N + QG ++ + ++ G W + ++ G NF VKW++ C L F K ++
Sbjct: 238 FSGNESGGIQGYVRVMTPPIENLYKGIW--GNISSRLGHNFRVKWVRQCSLDFSKVNNIH 295
Query: 368 NPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELM 406
NP N+NLP+K SRD EL + +Q+ + P +L+
Sbjct: 296 NPLNDNLPLKKSRDGTELPLVVCQQVCNAICNAPQIDLL 334
>gi|432114676|gb|ELK36515.1| Putative ATP-dependent RNA helicase YTHDC2 [Myotis davidii]
Length = 1365
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 90/145 (62%), Gaps = 5/145 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1224 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1283
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1284 SSEIGKE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1338
Query: 383 QELEPSIGEQLAALLYLEPDSELMA 407
QELEP IGEQL L P E M
Sbjct: 1339 QELEPQIGEQLLQLWERLPSGEKMT 1363
>gi|410904377|ref|XP_003965668.1| PREDICTED: YTH domain-containing protein 1-like [Takifugu rubripes]
Length = 685
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 98/170 (57%), Gaps = 5/170 (2%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VIL+FSV + FQG A+
Sbjct: 312 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKFQGFAR 371
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ +W G G F + WL EL F KT HL NP+NE+ PVKI
Sbjct: 372 LASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFTKTAHLSNPWNEHKPVKIG 431
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKRE---EEKAKGVNP 426
RD QE++P IG QL L L+ + ++ ++ KR E++ +G P
Sbjct: 432 RDGQEIQPDIGAQLCLLFPLDENVDIHQVARRIRHKRRTPSEQRPRGRPP 481
>gi|397575886|gb|EJK49944.1| hypothetical protein THAOC_31122 [Thalassiosira oceanica]
Length = 627
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 146/359 (40%), Gaps = 80/359 (22%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE-CREQDCVYKHTNE-DIK 130
R VCRHWLR LCMKG AC FLHQYD S+MP+CR GE C+ +DC ++H NE D
Sbjct: 67 LRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPLCR----HGERCKVRDCPFRHINEADRL 122
Query: 131 ECNMYKLGFCPNGPDCRYRHVKLP-GPPPSVEEVLQKIQQISSYNHG---------NPNK 180
EC Y GFC +GP CRYRHV+ P V + + Q+ + G PN+
Sbjct: 123 ECVFYSQGFCIHGPFCRYRHVQRDRADLPLVADFTLGLSQMQAGKDGGMTMRRPAAKPNE 182
Query: 181 HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQ---QQGTQTT 237
++ Q + F +G + + A +L + P+ Q GT
Sbjct: 183 FYKVSLCKHFQNGECPFGEGCHFAHGEA---------------ELRRYPKPGLQSGTDGE 227
Query: 238 QM-QNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
++ +N+ + +S +G W Q + +N+
Sbjct: 228 ELGENM-------------------------------DCAVSTVRGEWYVQERHAEMINK 256
Query: 297 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKY----------AHGTAHYGR 346
A V+ F+V + H QG A +TSK + GG K A +
Sbjct: 257 AIKQGMQVMTFFTVGDSLHIQGAALVTSK--AEMAGGATKRKRQPKSDAVSADKDGPFCY 314
Query: 347 NFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSEL 405
F W + CEL L + LP +R CQ++ GE + ++ P L
Sbjct: 315 RFKCVWYRTCELPVSTA--LDAAPDLLLPTPATRYCQDMTSKSGEAVMKAVWNSPLCTL 371
>gi|301613947|ref|XP_002936459.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Xenopus (Silurana) tropicalis]
Length = 1406
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN+AF + V L+FSV + HFQG A+M
Sbjct: 1266 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNQAFWESSTVYLVFSVQGSGHFQGFARM 1325
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
TS+IG +W G+ G F V+W++ L F + HL NP+N+N V+ISRD
Sbjct: 1326 TSEIGRE-KSQDW----GSTSLGGVFKVEWIRKESLPFQQAHHLLNPWNDNKKVQISRDG 1380
Query: 383 QELEPSIGEQLAAL 396
QELE +GEQL L
Sbjct: 1381 QELETLVGEQLLLL 1394
>gi|391330830|ref|XP_003739855.1| PREDICTED: YTH domain-containing protein 1-like [Metaseiulus
occidentalis]
Length = 266
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 99/163 (60%), Gaps = 2/163 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ LS +GVW+T NEAKLN+AF +NVIL+FSV + FQG A+
Sbjct: 82 ARFFMIKSNNYENVALSKARGVWSTPPQNEAKLNQAFRECKNVILVFSVKESGRFQGFAR 141
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ + NW G + G F V W+ EL F K +HL NP+N+ PVKI
Sbjct: 142 LASESRHDIPPINWVLPPGLSVRALGGVFYVDWICRKELPFIKCQHLYNPWNQGKPVKIG 201
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
RD QE+EP +G++L L ++ +L+ I A A+RE K K
Sbjct: 202 RDGQEIEPRMGKELCQLFPVDDGVDLIDIIKRARAERERYKRK 244
>gi|384247363|gb|EIE20850.1| hypothetical protein COCSUDRAFT_9790, partial [Coccomyxa
subellipsoidea C-169]
Length = 76
Score = 124 bits (311), Expect = 2e-25, Method: Composition-based stats.
Identities = 49/76 (64%), Positives = 59/76 (77%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNM 134
QTVC +WL+ LCMKG+ CGFLHQ D RMPVCR FGEC++ +C +KH E++KECNM
Sbjct: 1 QTVCTYWLKGLCMKGEECGFLHQLDPQRMPVCRTLLKFGECKDPECPFKHNLEEVKECNM 60
Query: 135 YKLGFCPNGPDCRYRH 150
YKLGFC GP CR+RH
Sbjct: 61 YKLGFCVYGPRCRFRH 76
>gi|348504281|ref|XP_003439690.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Oreochromis niloticus]
Length = 1393
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
Q + RYFI+KS N NLE+S Q+G+W+T SNE KL +AF +ILIFSV + HFQG
Sbjct: 1250 QTLVRYFIMKSSNIRNLEISQQKGIWSTTPSNETKLTKAFLENSAIILIFSVQGSGHFQG 1309
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+MTS + +W G G FSV+W+ + F T+H+ NP+N+N V+I
Sbjct: 1310 YARMTSVVSQEESCQDW----GLMELGGVFSVEWIHKENIPFQCTQHILNPWNDNKKVQI 1365
Query: 379 SRDCQELEPSIGEQLAAL 396
SRD QELEP G QL L
Sbjct: 1366 SRDGQELEPQAGSQLLLL 1383
>gi|300796442|ref|NP_001179740.1| probable ATP-dependent RNA helicase YTHDC2 [Bos taurus]
gi|296483779|tpg|DAA25894.1| TPA: YTH domain containing 2-like [Bos taurus]
gi|440900126|gb|ELR51325.1| Putative ATP-dependent RNA helicase YTHDC2 [Bos grunniens mutus]
Length = 1429
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 93/146 (63%), Gaps = 5/146 (3%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
+++ +P P RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV
Sbjct: 1276 SKSPSPKPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSV 1335
Query: 311 NRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPY 370
+ HFQG ++M+S+IG +W G+A G F V+W++ L F HL NP+
Sbjct: 1336 QGSGHFQGFSRMSSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPW 1390
Query: 371 NENLPVKISRDCQELEPSIGEQLAAL 396
N+N V+ISRD QELEP +GEQL L
Sbjct: 1391 NDNKKVQISRDGQELEPQVGEQLLQL 1416
>gi|197100155|ref|NP_001126423.1| YTH domain-containing protein 2 [Pongo abelii]
gi|75041361|sp|Q5R746.1|YTDC2_PONAB RecName: Full=YTH domain-containing protein 2
gi|55731400|emb|CAH92414.1| hypothetical protein [Pongo abelii]
Length = 671
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 530 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 589
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 590 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 644
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 645 QELEPQVGEQLLQL 658
>gi|291410671|ref|XP_002721618.1| PREDICTED: YTH domain containing 2 [Oryctolagus cuniculus]
Length = 1533
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1392 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1451
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1452 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1506
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1507 QELEPQVGEQLLQL 1520
>gi|389585769|dbj|GAB68499.1| YT521-B-like family protein [Plasmodium cynomolgi strain B]
Length = 565
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 176/427 (41%), Gaps = 89/427 (20%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCVYKHTNEDIK-- 130
+C H+++++CMK C +LHQ +++P C+ F C ++ C+++HT E+I
Sbjct: 103 IICIHYIKNMCMKNLFCNYLHQLIYAKIPACKNFLKNNYCADKVRGSCMFRHTQENINPG 162
Query: 131 ---------------------ECNMYKLGFCPNGPDCRYRH-------VKLPGPPPS--V 160
C Y LGFC G +C+ H + L P +
Sbjct: 163 GSAESRDDYLDDVLKFLYEKNICVNYLLGFCNLGYNCKKVHKYKSRKFINLISTLPKFYL 222
Query: 161 EEVLQKIQQISSYNHGNPNK----HFQQRGAFSHQTDKSQFSQGPNAVNQGAAGKSSTAE 216
+ +L Q++ ++ + N K + R A + + + P +VN SS E
Sbjct: 223 DHILVN-QRLYTHLYSNQKKLSLDMSKLRDALIVLSGEKYQEKVPLSVNSN----SSKNE 277
Query: 217 SANVHQQQL----------------------------------------VQQPQQQGTQT 236
N+ L Q + GT T
Sbjct: 278 KENIQTDDLSGSSRHYHPKVGVSGGTKNLDDFFPLGDNITMTSREKEKGFTQNNRVGTNT 337
Query: 237 TQ--MQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 294
+ +NL N +P + N +P + FI+K +L LS+ GVWAT ++N K
Sbjct: 338 DKKNQENLMN-IPGIYDINNEIVPCEKIKIFIIKCNQISHLYLSILYGVWATGKNNTRKF 396
Query: 295 NEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLK 354
F +I +FSVN + FQG AKM + ++ W T G NF ++W+K
Sbjct: 397 ITLFKENYTIIFLFSVNESGGFQGYAKMVTMPIKNLYENLW--GPITKRLGGNFRIQWIK 454
Query: 355 LCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEA 414
+ ++ F ++++NP NENLP+K SRD EL ++ + +Y P + +A ++
Sbjct: 455 IAKIDFDAFKNMKNPCNENLPLKKSRDGTELPLNLASIICNRIYALPSEDFLAGTIYEYK 514
Query: 415 KREEEKA 421
+R A
Sbjct: 515 RRINHAA 521
>gi|114601166|ref|XP_517881.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 isoform 2 [Pan
troglodytes]
gi|410213520|gb|JAA03979.1| YTH domain containing 2 [Pan troglodytes]
gi|410259616|gb|JAA17774.1| YTH domain containing 2 [Pan troglodytes]
gi|410298748|gb|JAA27974.1| YTH domain containing 2 [Pan troglodytes]
gi|410335283|gb|JAA36588.1| YTH domain containing 2 [Pan troglodytes]
Length = 1430
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSTVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPQVGEQLLQL 1417
>gi|10438158|dbj|BAB15183.1| unnamed protein product [Homo sapiens]
Length = 671
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 530 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 589
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 590 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 644
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 645 QELEPQVGEQLLQL 658
>gi|348532259|ref|XP_003453624.1| PREDICTED: YTH domain-containing protein 1-like [Oreochromis
niloticus]
Length = 672
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/157 (42%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +V+LIFSV + FQG A+
Sbjct: 308 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLIFSVRESGKFQGFAR 367
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ +W G G F + WL EL F KT HL NP+NE+ PVKI
Sbjct: 368 LASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNEHKPVKIG 427
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE++P IG QL AL L+ ++ ++ KR
Sbjct: 428 RDGQEIQPDIGAQLCALFPLDESVDIHQVARRIRHKR 464
>gi|126320676|ref|XP_001370066.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Monodelphis
domestica]
Length = 1447
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1306 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1365
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1366 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1420
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1421 QELEPQVGEQLLQL 1434
>gi|159164849|pdb|2YU6|A Chain A, Solution Structure Of The Yth Domain In Yth Domain-
Containing Protein 2
Length = 141
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 9 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 68
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 69 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 123
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 124 QELEPQVGEQLLQL 137
>gi|338713357|ref|XP_001918336.2| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Equus caballus]
Length = 1434
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1293 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1352
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1353 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1407
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1408 QELEPQVGEQLLQL 1421
>gi|344265985|ref|XP_003405061.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Loxodonta
africana]
Length = 1437
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1296 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1355
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1356 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1410
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1411 QELEPQVGEQLLQL 1424
>gi|244793002|ref|NP_001156485.1| probable ATP-dependent RNA helicase YTHDC2 [Mus musculus]
gi|239983830|sp|B2RR83.1|YTDC2_MOUSE RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187957072|gb|AAI38264.1| YTH domain containing 2 [Mus musculus]
gi|219520864|gb|AAI71951.1| Ythdc2 protein [Mus musculus]
Length = 1445
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1304 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1363
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1364 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1418
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1419 QELEPQVGEQLLQL 1432
>gi|431907961|gb|ELK11568.1| Putative ATP-dependent RNA helicase YTHDC2 [Pteropus alecto]
Length = 1438
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1297 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1356
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1357 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1411
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1412 QELEPQVGEQLLQL 1425
>gi|119569365|gb|EAW48980.1| YTH domain containing 2, isoform CRA_c [Homo sapiens]
Length = 709
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 568 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 627
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 628 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 682
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 683 QELEPQVGEQLLQL 696
>gi|354490378|ref|XP_003507335.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2-like [Cricetulus griseus]
Length = 1433
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1292 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1351
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1352 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1406
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1407 QELEPQVGEQLLQL 1420
>gi|426233785|ref|XP_004010894.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Ovis aries]
Length = 1431
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1290 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSVVYLVFSVQGSGHFQGFSRM 1349
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1350 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1404
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1405 QELEPQVGEQLLQL 1418
>gi|383409739|gb|AFH28083.1| putative ATP-dependent RNA helicase YTHDC2 [Macaca mulatta]
Length = 1430
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPQVGEQLLQL 1417
>gi|350581003|ref|XP_003123893.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like, partial
[Sus scrofa]
Length = 1151
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1010 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1069
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1070 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1124
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1125 QELEPQVGEQLLQL 1138
>gi|348575085|ref|XP_003473320.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Cavia
porcellus]
Length = 1438
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1297 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1356
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1357 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1411
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1412 QELEPQVGEQLLQL 1425
>gi|119569363|gb|EAW48978.1| YTH domain containing 2, isoform CRA_a [Homo sapiens]
Length = 898
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 757 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 816
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 817 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 871
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 872 QELEPQVGEQLLQL 885
>gi|296193949|ref|XP_002744748.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Callithrix
jacchus]
Length = 1429
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1288 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1347
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1348 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1402
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1403 QELEPQVGEQLLQL 1416
>gi|344254992|gb|EGW11096.1| putative ATP-dependent RNA helicase YTHDC2 [Cricetulus griseus]
Length = 1268
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1127 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1186
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1187 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1241
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1242 QELEPQVGEQLLQL 1255
>gi|297294858|ref|XP_002804526.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Macaca
mulatta]
Length = 1443
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1302 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1361
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1362 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1416
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1417 QELEPQVGEQLLQL 1430
>gi|392342510|ref|XP_003754609.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Rattus
norvegicus]
Length = 1434
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1293 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1352
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1353 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1407
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1408 QELEPLVGEQLLQL 1421
>gi|403256107|ref|XP_003920739.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Saimiri
boliviensis boliviensis]
Length = 1430
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPQVGEQLLQL 1417
>gi|395510586|ref|XP_003759555.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2, partial
[Sarcophilus harrisii]
Length = 1420
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1279 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1338
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1339 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1393
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1394 QELEPQVGEQLLQL 1407
>gi|380798777|gb|AFE71264.1| putative ATP-dependent RNA helicase YTHDC2, partial [Macaca mulatta]
Length = 1303
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1162 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1221
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1222 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1276
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1277 QELEPQVGEQLLQL 1290
>gi|397512911|ref|XP_003826777.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Pan paniscus]
Length = 1430
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPQVGEQLLQL 1417
>gi|426349664|ref|XP_004042411.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Gorilla gorilla gorilla]
Length = 1424
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1283 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1342
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1343 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1397
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1398 QELEPQVGEQLLQL 1411
>gi|332221479|ref|XP_003259888.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Nomascus
leucogenys]
Length = 1430
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPQVGEQLLQL 1417
>gi|410948040|ref|XP_003980749.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Felis catus]
Length = 1411
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 89/142 (62%), Gaps = 5/142 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1270 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1329
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1330 SSEIGRE-KSQDW----GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDG 1384
Query: 383 QELEPSIGEQLAALLYLEPDSE 404
QELEP +GEQL L P E
Sbjct: 1385 QELEPQVGEQLLQLWERLPSGE 1406
>gi|149029549|gb|EDL84747.1| similar to YTH domain containing 2 (predicted) [Rattus norvegicus]
Length = 818
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 677 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 736
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 737 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 791
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 792 QELEPLVGEQLLQL 805
>gi|118104219|ref|XP_413970.2| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Gallus gallus]
Length = 1439
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N +NL++S Q+G+W+T SNE KLN AF + V LIFSV + HFQG A+M
Sbjct: 1296 RYFIMKSSNLQNLDISQQKGIWSTTPSNEQKLNRAFWESSLVYLIFSVQGSGHFQGFARM 1355
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG W G+ G F V+W++ + F T HL NP+N+N V+ISRD
Sbjct: 1356 SSEIGCE-QSQCW----GSTGLGGVFKVEWIRKESIPFQFTHHLLNPWNDNKEVQISRDG 1410
Query: 383 QELEPSIGEQLAAL 396
QELEP IGEQL L
Sbjct: 1411 QELEPQIGEQLLKL 1424
>gi|402872279|ref|XP_003900050.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Papio anubis]
Length = 1365
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1224 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1283
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1284 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1338
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1339 QELEPQVGEQLLQL 1352
>gi|392344596|ref|XP_003749024.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
YTHDC2 [Rattus norvegicus]
Length = 1430
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPLVGEQLLQL 1417
>gi|148678047|gb|EDL09994.1| mCG11938 [Mus musculus]
Length = 1056
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 915 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 974
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 975 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1029
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1030 QELEPQVGEQLLQL 1043
>gi|355691523|gb|EHH26708.1| hypothetical protein EGK_16756 [Macaca mulatta]
gi|355750107|gb|EHH54445.1| hypothetical protein EGM_15291 [Macaca fascicularis]
Length = 1432
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1291 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1350
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1351 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1405
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1406 QELEPQVGEQLLQL 1419
>gi|355729599|gb|AES09922.1| YTH domain containing 2 [Mustela putorius furo]
Length = 824
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 684 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 743
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 744 SSEIGRE-KSQDW----GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDG 798
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 799 QELEPQVGEQLLQL 812
>gi|359320707|ref|XP_531871.3| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Canis lupus
familiaris]
Length = 1374
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1233 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1292
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1293 SSEIGRE-KSQDW----GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDG 1347
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1348 QELEPQVGEQLLQL 1361
>gi|327276569|ref|XP_003223042.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Anolis
carolinensis]
Length = 1440
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG A+M
Sbjct: 1299 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSVVYLVFSVQGSGHFQGFARM 1358
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+ G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1359 SSEIGRE-KSQDW----GSTGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1413
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1414 QELEPQVGEQLLQL 1427
>gi|47077415|dbj|BAD18595.1| unnamed protein product [Homo sapiens]
Length = 1340
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1199 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 1258
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1259 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1313
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1314 QELEPQVGEQLLQL 1327
>gi|269847874|ref|NP_073739.3| probable ATP-dependent RNA helicase YTHDC2 [Homo sapiens]
gi|239938805|sp|Q9H6S0.2|YTDC2_HUMAN RecName: Full=Probable ATP-dependent RNA helicase YTHDC2
gi|187950589|gb|AAI37286.1| YTH domain containing 2 [Homo sapiens]
Length = 1430
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1289 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRM 1348
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1349 SSEIGRE-KSQDW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1403
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1404 QELEPLVGEQLLQL 1417
>gi|301777390|ref|XP_002924113.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like
[Ailuropoda melanoleuca]
Length = 1460
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 87/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1319 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1378
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1379 SSEIGRE-KSQDW----GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDG 1433
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1434 QELEPQVGEQLLQL 1447
>gi|340373785|ref|XP_003385420.1| PREDICTED: hypothetical protein LOC100638718 [Amphimedon
queenslandica]
Length = 570
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 10/167 (5%)
Query: 256 PLPQGIS-------RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
PLP I+ RYF++KS N EN++++ + VW+T NE KLN+A+ NV+LIF
Sbjct: 153 PLPHKITDRLFVNTRYFVIKSNNYENVDIAKSKNVWSTLPYNEKKLNKAYRDCRNVLLIF 212
Query: 309 SVNRTRHFQGCAKMTSKIGGSVGGGNWKY--AHGTAHYGRNFSVKWLKLCELSFHKTRHL 366
SV + FQG AK+ S+ V +W + + F + W+ L+F+ + L
Sbjct: 213 SVKESGGFQGFAKLVSESRSDVPRVHWVLPPSMSASQLSHVFKLDWIHKGTLAFNLCQDL 272
Query: 367 RNPYNENLPVKISRDCQELEPSIGEQLAAL-LYLEPDSELMAISVAA 412
+NP+NEN PVKI RD QE+EPS+GE+L L L L D A S A
Sbjct: 273 KNPWNENKPVKIGRDGQEIEPSVGEKLCKLWLSLNADGSSSASSTVA 319
>gi|351703291|gb|EHB06210.1| Putative ATP-dependent RNA helicase YTHDC2 [Heterocephalus glaber]
Length = 1433
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1292 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1351
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+ G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1352 SSEIGRE-KSQDW----GSTGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1406
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1407 QELEPQVGEQLLQL 1420
>gi|395831759|ref|XP_003788959.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2 [Otolemur
garnettii]
Length = 1436
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 85/134 (63%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1295 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1354
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
S+IG W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1355 CSEIGRE-KSQEW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQISRDG 1409
Query: 383 QELEPSIGEQLAAL 396
QELEP +GEQL L
Sbjct: 1410 QELEPQVGEQLLQL 1423
>gi|432956465|ref|XP_004085707.1| PREDICTED: uncharacterized protein LOC101166689, partial [Oryzias
latipes]
Length = 469
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 295 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 354
Query: 322 MTSKIGGSVGGG---NWKYAHGT--AHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + WL EL F KT HL NP+NE+ P+
Sbjct: 355 LASE---SQHGGSPIHWVLPAGINAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNEHKPI 411
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
KI RD QE++P +G QL L L+ ++ +S KR
Sbjct: 412 KIGRDGQEIQPDVGAQLCGLFPLDESVDVHQVSRRIRHKR 451
>gi|260829479|ref|XP_002609689.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
gi|229295051|gb|EEN65699.1| hypothetical protein BRAFLDRAFT_123593 [Branchiostoma floridae]
Length = 1907
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+K N+ NL++++ Q +WAT SNE KLN+AF +NV L+FSV + HFQG A+M
Sbjct: 1605 RYFILKCNNQRNLDIAMNQSIWATTPSNEKKLNKAFKDCQNVYLVFSVQGSGHFQGYARM 1664
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
S I + +A G F ++W+K + F HL NP+NEN V+ISRD
Sbjct: 1665 ASSI-----SKDKVPEFSSASLGGAFQIEWIKRMSIPFQAAHHLLNPWNENKKVQISRDG 1719
Query: 383 QELEPSIGEQL 393
QE+EP +GEQL
Sbjct: 1720 QEIEPQVGEQL 1730
>gi|170042916|ref|XP_001849154.1| splicing factor yt521-b [Culex quinquefasciatus]
gi|167866328|gb|EDS29711.1| splicing factor yt521-b [Culex quinquefasciatus]
Length = 569
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ +S +GVW+T NEA LN+AF + NVIL+FSV + F G A+
Sbjct: 163 TRFFLIKSNNTENVTISKTKGVWSTLPPNEANLNQAFRESRNVILVFSVKESGKFAGFAR 222
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M ++ + W G + G + W+ EL F T HL NP+NEN PVKI
Sbjct: 223 MAAEARRDLPAVEWVLPPGMSAKALGGVIKIDWVCKKELPFTSTTHLYNPWNENKPVKIG 282
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
RD QE+EP + E+L L E AI + K+ +E +K
Sbjct: 283 RDGQEIEPKVAEELCRLF-----PEDTAIEMTPILKKSKEASK 320
>gi|156064289|ref|XP_001598066.1| hypothetical protein SS1G_00152 [Sclerotinia sclerotiorum 1980]
gi|154691014|gb|EDN90752.1| hypothetical protein SS1G_00152 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 821
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +RYFIVKS N EN+ ++ GVW TQ N E F++ +NVIL+FS+N++R FQG
Sbjct: 647 KGDTRYFIVKSFNDENVIKCIEDGVWTTQAQNGPIFKETFETCKNVILVFSINKSRAFQG 706
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + GSV +W+++ G F VKWL +C + FHK +L+N N +L V I
Sbjct: 707 YARMES-LPGSVPVPSWQHSINWESAGA-FKVKWLAVCTVRFHKVGYLKNSLNADLAVLI 764
Query: 379 SRDCQELEPSIGEQLAALL 397
++D QE+E G +L ++
Sbjct: 765 AKDGQEIEGGCGCELLGVI 783
>gi|148224696|ref|NP_001088293.1| YTH domain containing 1 [Xenopus laevis]
gi|54038191|gb|AAH84321.1| LOC495129 protein [Xenopus laevis]
Length = 704
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VIL+FSV + FQG A+
Sbjct: 334 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKFQGFAR 393
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ ELSF K HL NP+NE+ PVKI
Sbjct: 394 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELSFTKCVHLTNPWNEHKPVKIG 453
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+EP G QL L + +L + KR
Sbjct: 454 RDGQEIEPDCGTQLCLLFSADDSIDLYQVIHKMRHKR 490
>gi|156382101|ref|XP_001632393.1| predicted protein [Nematostella vectensis]
gi|156219448|gb|EDO40330.1| predicted protein [Nematostella vectensis]
Length = 1403
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 87/135 (64%), Gaps = 5/135 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+K N+ NL++S+ +G+WAT +NE KLN AF ++ V+LIFSV + HFQG A
Sbjct: 1272 ARFFIMKCNNQRNLDISMAKGIWATTIANEKKLNRAFKESKKVVLIFSVQGSGHFQGVAH 1331
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MTS IG G++ G F+V+W+ + F + HL NP+N++ V+ISRD
Sbjct: 1332 MTSPIGREKSP-----EFGSSSLGGVFTVEWITKANIPFQQAHHLVNPWNDHKKVQISRD 1386
Query: 382 CQELEPSIGEQLAAL 396
QELEPSIG +L L
Sbjct: 1387 GQELEPSIGAELCKL 1401
>gi|449688694|ref|XP_004211818.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Hydra
magnipapillata]
Length = 603
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/133 (43%), Positives = 87/133 (65%), Gaps = 5/133 (3%)
Query: 264 YFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMT 323
YFI+K N +N+ +S ++ +WAT R NE +LN AF+ ++ V LIFSV + HFQG AKMT
Sbjct: 340 YFIMKCNNDKNMSISFERNIWATTRGNEKRLNRAFNESDEVFLIFSVQGSGHFQGVAKMT 399
Query: 324 SKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQ 383
S+IG G+ + G F+++W+ E++F T+HL NP+N+N V+ISRD Q
Sbjct: 400 SEIGDRRCED-----FGSLNLGGLFNIEWIHQEEIAFQYTQHLCNPWNDNKKVQISRDAQ 454
Query: 384 ELEPSIGEQLAAL 396
ELE ++G+ L +
Sbjct: 455 ELETNVGKSLVEM 467
>gi|347836834|emb|CCD51406.1| hypothetical protein [Botryotinia fuckeliana]
Length = 789
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +RYFIVKS N EN+ ++ G+W TQ N EAF++ +NVILIFS+N++R FQG
Sbjct: 637 KGDTRYFIVKSFNDENVIKCIEDGIWTTQAQNGPIFKEAFETCKNVILIFSINKSRAFQG 696
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M + + G++ +W+ + G F V+WL +C + F K HLRN N+NLPV I
Sbjct: 697 YARMET-LPGAIQIPSWQNSINWESAGA-FRVRWLVVCNVRFGKIGHLRNGLNDNLPVLI 754
Query: 379 SRDCQELEPSIGEQLAALL 397
+D QE+E G L L
Sbjct: 755 GKDGQEVEEGCGRGLCECL 773
>gi|221484134|gb|EEE22438.1| zinc finger (CCCH type) protein [Toxoplasma gondii GT1]
gi|221505396|gb|EEE31050.1| zinc finger (CCCH type) protein [Toxoplasma gondii VEG]
Length = 640
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
PQ R+FI+KS N+ S+Q GVWAT + N KL+ AF S ++V+L+FS N + FQ
Sbjct: 442 PQSTKRFFIIKSNRMSNIYTSIQHGVWATSKGNSRKLSNAFTSTDHVLLLFSANESGGFQ 501
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G +M S + G W G NF V WLK C++ F + + NP+N++LP++
Sbjct: 502 GFGRMMSLPDPQLFPGIWGPVQ--LRLGSNFRVMWLKQCKIEFEELGKVTNPWNDDLPLR 559
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
SRD E+ P++G L + P +L+A + A R + A
Sbjct: 560 KSRDGTEVPPALGSLLCTWMSQRPSEDLLAGTGIDPATRIDHSA 603
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 68 SGRRSFRQTV-CRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
SGR+ + TV CRHW + +CMKG+ C FLHQ RMP CR + R C ++H +
Sbjct: 133 SGRQWGKHTVVCRHWWKGMCMKGEFCDFLHQLIYHRMPACRNQLCCPDTRRGCCPFRHED 192
>gi|237836297|ref|XP_002367446.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
gi|211965110|gb|EEB00306.1| zinc finger (CCCH type) protein, putative [Toxoplasma gondii ME49]
Length = 640
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 90/164 (54%), Gaps = 2/164 (1%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
PQ R+FI+KS N+ S+Q GVWAT + N KL+ AF S ++V+L+FS N + FQ
Sbjct: 442 PQSTKRFFIIKSNRMSNIYTSIQHGVWATSKGNSRKLSNAFTSTDHVLLLFSANESGGFQ 501
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G +M S + G W G NF V WLK C++ F + + NP+N++LP++
Sbjct: 502 GFGRMMSLPDPQLFPGIWGPVQ--LRLGSNFRVMWLKQCKIEFEELGKVTNPWNDDLPLR 559
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
SRD E+ P++G L + P +L+A + A R + A
Sbjct: 560 KSRDGTEVPPALGSLLCTWMSQRPSEDLLAGTGIDPATRIDHSA 603
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 68 SGRRSFRQTV-CRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
SGR+ + TV CRHW + +CMKG+ C FLHQ RMP CR + R C ++H +
Sbjct: 133 SGRQWGKHTVVCRHWWKGMCMKGEFCDFLHQLIYHRMPACRNQLCCPDTRRGCCPFRHED 192
>gi|401406231|ref|XP_003882565.1| YT521-B-like family protein, related [Neospora caninum Liverpool]
gi|325116980|emb|CBZ52533.1| YT521-B-like family protein, related [Neospora caninum Liverpool]
Length = 661
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 89/164 (54%), Gaps = 2/164 (1%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
PQ R+FI+KS N+ SVQ GVWAT + N KL AF S ++V+L+FS N + FQ
Sbjct: 437 PQSTKRFFIIKSNRMSNIYTSVQHGVWATSKGNTRKLINAFTSTDHVLLLFSANESGGFQ 496
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G +M + + G W G NF V WLK C++ F + + NP+NE+LP++
Sbjct: 497 GFGRMMTLPDAQLFPGIWGPVQ--LRLGGNFRVMWLKQCKVEFEELGKVTNPWNEDLPLR 554
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
SRD E+ P++G L + P +L+A + A R + A
Sbjct: 555 KSRDGTEVPPALGSLLCTWMAQRPSEDLLAGTGIDAATRIDHSA 598
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 68 SGRRSFRQTV-CRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKH 124
SGR+ R TV CRHW + +CMKG+ C FLHQ RMP CR + R C ++H
Sbjct: 130 SGRQWGRHTVVCRHWWKGMCMKGEFCDFLHQLIYHRMPACRNQLCCPDTRRGCCPFRH 187
>gi|336466541|gb|EGO54706.1| hypothetical protein NEUTE1DRAFT_124901 [Neurospora tetrasperma
FGSC 2508]
gi|350286572|gb|EGZ67819.1| YTH-domain-containing protein, partial [Neurospora tetrasperma FGSC
2509]
Length = 710
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 98/177 (55%), Gaps = 12/177 (6%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+F++KS N ENL+ ++ +W TQ SNE K +A+++ +NVI FSVN+++ FQG
Sbjct: 501 KGDTRFFVLKSFNNENLDKAMDDAIWVTQTSNEEKFTKAYETCKNVIFFFSVNKSKAFQG 560
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A MTS + +W H+ + F ++WL + F + +L+NP NENL V
Sbjct: 561 YALMTSLPSADINKASW---MKNIHWQTSPPFRLRWLSKVAVPFSRIGYLKNPLNENLSV 617
Query: 377 KISRDCQELEPSIGEQLAALL--YLEPDSELMAISVAAE-----AKREEEKAKGVNP 426
I++D QE+E G L + Y E +S A + A+RE + A G NP
Sbjct: 618 LIAKDGQEVEEDCGRALLREMESYAEWESNKTAFPSGSRQQPQHARRESDSASGFNP 674
>gi|326918913|ref|XP_003205729.1| PREDICTED: YTH domain-containing protein 1-like isoform 3
[Meleagris gallopavo]
Length = 686
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 314 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 373
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 374 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 433
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP G QL L
Sbjct: 434 RDGQEIEPECGTQLCLLF 451
>gi|224049584|ref|XP_002197763.1| PREDICTED: YTH domain-containing protein 1 [Taeniopygia guttata]
Length = 704
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 332 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 391
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 392 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 451
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP G QL L
Sbjct: 452 RDGQEIEPECGTQLCLLF 469
>gi|326918911|ref|XP_003205728.1| PREDICTED: YTH domain-containing protein 1-like isoform 2
[Meleagris gallopavo]
Length = 704
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 332 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 391
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 392 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 451
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP G QL L
Sbjct: 452 RDGQEIEPECGTQLCLLF 469
>gi|432962041|ref|XP_004086639.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Oryzias
latipes]
Length = 1383
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 83/134 (61%), Gaps = 5/134 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+ +W+T SNE KL +AF VILIFSV + HFQG A+M
Sbjct: 1237 RYFIMKSSNMRNLEISRQKEIWSTSPSNENKLTKAFHCNSFVILIFSVQGSGHFQGYARM 1296
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
TS + +W G G FSV+W+ +SF T+H+ NP+N+N V+ISRD
Sbjct: 1297 TSAVHME-NCQDW----GFVGLGGVFSVEWIHKESISFQCTQHILNPWNDNKKVQISRDG 1351
Query: 383 QELEPSIGEQLAAL 396
QELEP G QL L
Sbjct: 1352 QELEPQTGHQLLML 1365
>gi|326667516|ref|XP_695496.5| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Danio
rerio]
Length = 1329
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 83/139 (59%), Gaps = 5/139 (3%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
P RYFI+KS N N+ELS Q+ VW+T +NE KLN AF ++ V L+FSV + HFQ
Sbjct: 1192 PHSSVRYFIMKSSNPRNIELSQQRSVWSTTPNNEQKLNRAFQNSSAVFLVFSVQGSGHFQ 1251
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+MTS + G++ G FSV+W+ L+F T L NP+N+N V+
Sbjct: 1252 GYARMTSAVSSERC-----LDFGSSGLGGVFSVQWIHTESLAFQLTHKLLNPWNDNKKVQ 1306
Query: 378 ISRDCQELEPSIGEQLAAL 396
ISRD QELEP G QL L
Sbjct: 1307 ISRDAQELEPHTGNQLLQL 1325
>gi|405953797|gb|EKC21388.1| YTH domain-containing protein 1 [Crassostrea gigas]
Length = 985
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYF++KS N EN+ L+ +GVW+T NE +LN A+ S +NVILIFSV + FQG A+
Sbjct: 293 ARYFLIKSNNHENVALAKAKGVWSTPPQNEIRLNNAYKSCDNVILIFSVRESGKFQGFAR 352
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ + W G + + F + W+ EL+F KT+HL N +N+N PVKI
Sbjct: 353 IADESTKDHPPIRWVLPPGLSARALSGVFKLDWINRKELAFTKTQHLHNAWNDNKPVKIG 412
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+EP GE L + PD + S+A +A++
Sbjct: 413 RDGQEVEPRCGEALCKM--FPPDENVDLSSIARKARK 447
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 92/157 (58%), Gaps = 4/157 (2%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYF++KS N EN+ L+ +GVW+T NE +LN A+ S +NVILIFSV + FQG A+
Sbjct: 733 ARYFLIKSNNHENVALAKAKGVWSTPPQNEIRLNNAYKSCDNVILIFSVRESGKFQGFAR 792
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ + W G + + F + W+ EL+F KT+HL N +N+N PVKI
Sbjct: 793 IADESTKDHPPIRWVLPPGLSARALSGVFKLDWINRKELAFTKTQHLHNAWNDNKPVKIG 852
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+EP GE L + PD + S+A +A++
Sbjct: 853 RDGQEVEPRCGEALCKM--FPPDENVDLSSIARKARK 887
>gi|85090781|ref|XP_958582.1| hypothetical protein NCU05968 [Neurospora crassa OR74A]
gi|28919955|gb|EAA29346.1| predicted protein [Neurospora crassa OR74A]
Length = 713
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 12/177 (6%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+F++KS N ENL+ ++ +W TQ SNE K +A+++ +NVI FSVN+++ FQG
Sbjct: 502 KGDTRFFVLKSFNNENLDKAMDDAIWVTQTSNEEKFTKAYETCKNVIFFFSVNKSKAFQG 561
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A MTS + +W H+ + F ++WL + F + +L+NP NENL V
Sbjct: 562 YALMTSLPSADINKASW---MKNIHWPTSPPFRLRWLSKVAVPFSRIGYLKNPLNENLSV 618
Query: 377 KISRDCQELEPSIGEQLAALL--YLEPDSELMAI-----SVAAEAKREEEKAKGVNP 426
I++D QE+E G L + Y E +S A A+RE + A G NP
Sbjct: 619 LIAKDGQEVEEDCGRALLREMESYAEWESNKTAFPSGGRQQPEHARRESDSASGFNP 675
>gi|326918909|ref|XP_003205727.1| PREDICTED: YTH domain-containing protein 1-like isoform 1
[Meleagris gallopavo]
Length = 749
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 377 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 436
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 437 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 496
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP G QL L
Sbjct: 497 RDGQEIEPECGTQLCLLF 514
>gi|427795935|gb|JAA63419.1| Putative splicing factor yt521-b protein, partial [Rhipicephalus
pulchellus]
Length = 464
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/149 (42%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F+VKS N EN+ LS +GVW+T NEAKLN+AF +NVILI+SV + FQG A+
Sbjct: 120 ARFFLVKSNNHENVVLSKAKGVWSTPPQNEAKLNQAFRECKNVILIYSVKESGKFQGFAR 179
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ W G + G F V W+ EL F KT HL NP+N+ VKI
Sbjct: 180 LGSESNHDCPTIQWVLPPGLSARALGGVFQVDWICRRELPFTKTTHLYNPWNDGKQVKIG 239
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAI 408
RD QE+EP + E+L L ++ + +L +I
Sbjct: 240 RDGQEIEPRVAEELCRLFPVDENIDLRSI 268
>gi|55925411|ref|NP_001007411.1| YTH domain-containing protein 1 [Danio rerio]
gi|55250288|gb|AAH85378.1| Zgc:101592 [Danio rerio]
gi|182890948|gb|AAI65861.1| Zgc:101592 protein [Danio rerio]
Length = 679
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 89/157 (56%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF +A +V+LIFSV + FQG A+
Sbjct: 299 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRAARSVVLIFSVRESGKFQGFAR 358
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F KT HL NP+NE+ PVKI
Sbjct: 359 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLANPWNEHKPVKIG 418
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+EP G +L L + +L + KR
Sbjct: 419 RDGQEIEPECGTELCMLFPHDESIDLYQVIHKMRHKR 455
>gi|449270189|gb|EMC80893.1| YTH domain-containing protein 1, partial [Columba livia]
Length = 694
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 322 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 381
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 382 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 441
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP G QL L
Sbjct: 442 RDGQEIEPECGTQLCLLF 459
>gi|336268789|ref|XP_003349157.1| hypothetical protein SMAC_06993 [Sordaria macrospora k-hell]
gi|380089487|emb|CCC12586.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 740
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 84/143 (58%), Gaps = 5/143 (3%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+F++KS N ENLE +++ G+W TQ SNE K +AF++ NVI FSVN+++ FQG
Sbjct: 525 KGDTRFFVLKSFNNENLEKAMEDGIWVTQTSNEEKFTKAFETCRNVIFFFSVNKSKAFQG 584
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A MTS + +W H+ + F +KWL + F + +L+N NENL V
Sbjct: 585 VALMTSLPSADISKASW---MKNIHWQTSPPFRLKWLTKVAVPFSRIGYLKNSLNENLSV 641
Query: 377 KISRDCQELEPSIGEQLAALLYL 399
I++D QE+E G L + L
Sbjct: 642 LIAKDGQEVEEECGRLLMREMEL 664
>gi|194749423|ref|XP_001957138.1| GF10271 [Drosophila ananassae]
gi|190624420|gb|EDV39944.1| GF10271 [Drosophila ananassae]
Length = 713
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 243 TRFFLIKSNNSDNVQLSKSKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 302
Query: 322 MTSKIGGSVGGGNWKY--AHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 303 MAAPSRRDIPQVAWVLPPSISSKALGGVIELDWICRKELSFNATLHLHNSWNEGKPVKIG 362
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 363 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 408
>gi|56118412|ref|NP_001008121.1| YTH domain containing 1 [Xenopus (Silurana) tropicalis]
gi|51703808|gb|AAH81325.1| MGC89461 protein [Xenopus (Silurana) tropicalis]
Length = 673
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VIL+FSV + FQG A+
Sbjct: 305 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILVFSVRESGKFQGFAR 364
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K HL NP+NE+ PVKI
Sbjct: 365 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKCVHLTNPWNEHKPVKIG 424
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+EP G QL L + +L + KR
Sbjct: 425 RDGQEIEPDCGTQLCLLFPADDSIDLYQVIHKMRHKR 461
>gi|357628554|gb|EHJ77849.1| hypothetical protein KGM_02742 [Danaus plexippus]
Length = 443
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 7/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 108 TRFFLIKSNNSENITLSKAKGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFAR 167
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ V +W G + + F V W+ ELSF T HL NP+NE PVKI
Sbjct: 168 LASESRRDVPSISWVLPPGLSAKVLDGVFKVDWICRKELSFSSTLHLYNPWNEGKPVKIG 227
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGG 430
RD QE+EP + E+L L P+ E I + ++ +E +K +GG
Sbjct: 228 RDGQEIEPKVAEELCRLF---PEDE--GIEMTPILRKSKEASKKAYLKSGG 273
>gi|226484654|emb|CAX74236.1| YTH domain-containing protein [Schistosoma japonicum]
Length = 855
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
++YF++KS N EN+E++ + VWAT + NE +LN+AF NV+LIFSV + FQG A+
Sbjct: 179 TKYFMIKSNNFENIEIAKSRNVWATTKGNETRLNKAFFDYNNVLLIFSVRESGRFQGFAR 238
Query: 322 MTSKIGGSVGGGNWKYAH--GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ + + +W + T F +KW+ ELSF KT HL N +NE+ PVKI
Sbjct: 239 IIASSDPRI-KVDWVLSSRMNTGLLSNPFRIKWISKSELSFTKTGHLLNAWNEDKPVKIG 297
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP+ GE L +
Sbjct: 298 RDGQEIEPTCGEALCRMF 315
>gi|194866090|ref|XP_001971751.1| GG14260 [Drosophila erecta]
gi|190653534|gb|EDV50777.1| GG14260 [Drosophila erecta]
Length = 723
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|345317651|ref|XP_003429909.1| PREDICTED: YTH domain-containing protein 1-like [Ornithorhynchus
anatinus]
Length = 782
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 88/157 (56%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 410 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 469
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 470 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 529
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE+E G QL L + +L + KR
Sbjct: 530 RDGQEIELECGTQLCLLFPPDESIDLYQVIHKMRHKR 566
>gi|195491430|ref|XP_002093557.1| GE20687 [Drosophila yakuba]
gi|194179658|gb|EDW93269.1| GE20687 [Drosophila yakuba]
Length = 723
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|195587488|ref|XP_002083493.1| GD13329 [Drosophila simulans]
gi|194195502|gb|EDX09078.1| GD13329 [Drosophila simulans]
Length = 721
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|5052478|gb|AAD38569.1|AF145594_1 BcDNA.GH01918 [Drosophila melanogaster]
Length = 721
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|24656811|ref|NP_647811.2| YT521-B, isoform A [Drosophila melanogaster]
gi|23092919|gb|AAF47768.2| YT521-B, isoform A [Drosophila melanogaster]
Length = 721
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|24656816|ref|NP_728876.1| YT521-B, isoform B [Drosophila melanogaster]
gi|23092920|gb|AAN11564.1| YT521-B, isoform B [Drosophila melanogaster]
Length = 710
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 243 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 302
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 303 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 362
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 363 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 408
>gi|25012176|gb|AAN71205.1| GH27257p, partial [Drosophila melanogaster]
Length = 719
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 252 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 311
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 312 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 371
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 372 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 417
>gi|195337162|ref|XP_002035198.1| GM14053 [Drosophila sechellia]
gi|194128291|gb|EDW50334.1| GM14053 [Drosophila sechellia]
Length = 721
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 254 TRFFLIKSNNSDNVQLSKNKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 313
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 314 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 373
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 374 RDGQEIEPKIGGELCRLFPEDEQIELTPILKKSKETARVMREKGIH 419
>gi|449527454|ref|XP_004170726.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like, partial [Cucumis sativus]
Length = 129
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 86/130 (66%), Gaps = 4/130 (3%)
Query: 135 YKLGFCPNGPDCRYRHVKLPGPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGA-FSHQTD 193
YK G CPNGPDCRYRH K+P PPP +EE+LQKIQ + SYN+G NK F QRG S Q
Sbjct: 1 YKFGLCPNGPDCRYRHAKMPEPPPPLEEILQKIQHLGSYNYGPSNKFFTQRGVGLSQQNK 60
Query: 194 KSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRN 253
KSQF Q P V QG GK S AESANV QQQ Q Q T +Q+L NG +Q NRN
Sbjct: 61 KSQFPQVPALVTQGVTGKPSAAESANVQQQQGQQFAPQ--ASQTPVQSLSNG-HDQLNRN 117
Query: 254 ATPLPQGISR 263
A LPQGISR
Sbjct: 118 AMSLPQGISR 127
>gi|195441434|ref|XP_002068514.1| GK20378 [Drosophila willistoni]
gi|194164599|gb|EDW79500.1| GK20378 [Drosophila willistoni]
Length = 716
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 245 TRFFLIKSNNSDNVQLSKSKNVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 304
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 305 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNSWNEGKPVKIG 364
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 365 RDGQEIEPKIGGELCRLFPEDEQIELTPILRKSKETARVMREKGIH 410
>gi|406866866|gb|EKD19905.1| hypothetical protein MBM_01857 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 795
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +RYFIVKS N EN+ +Q VW TQ N AF++ +NVIL+FS N+++ FQG
Sbjct: 637 KGETRYFIVKSFNEENVLRCIQDSVWTTQVQNGHIFKRAFETCKNVILVFSTNKSKAFQG 696
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M + GS W+ G F V+WL +C FH+ HL+N NE + V I
Sbjct: 697 YARMEG-LPGSAAITQWQRVITWESAG-AFKVRWLVVCPTFFHRVGHLKNSLNEGMAVFI 754
Query: 379 SRDCQELEPSIGEQLAALLYLEPDS 403
+D QE+E + G +L L+ E D+
Sbjct: 755 GKDGQEIEENCGSKLVDLIDEEFDA 779
>gi|156379627|ref|XP_001631558.1| predicted protein [Nematostella vectensis]
gi|156218600|gb|EDO39495.1| predicted protein [Nematostella vectensis]
Length = 137
Score = 114 bits (284), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 2/137 (1%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYF++KS N EN+ LS +GVW+T R+NE KLN AF +NVILIFSV + FQG A++
Sbjct: 1 RYFVMKSNNAENVLLSKAKGVWSTPRTNEKKLNAAFKRYKNVILIFSVKESGKFQGFARL 60
Query: 323 TSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
+ W G G F ++WL +L F K HLRNP+N+N VKI R
Sbjct: 61 LGEAKHGEHFVPWVLPPGMNAKALGGVFKLEWLNRHDLWFSKCIHLRNPWNDNKEVKICR 120
Query: 381 DCQELEPSIGEQLAALL 397
D QE+EP +GE+L L
Sbjct: 121 DGQEVEPGVGEELCRLF 137
>gi|410903275|ref|XP_003965119.1| PREDICTED: probable ATP-dependent RNA helicase YTHDC2-like [Takifugu
rubripes]
Length = 1382
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 86/135 (63%), Gaps = 5/135 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+ YFI+KS N ++++S Q+G+W+T SNE KL++AF +ILIFSV + HFQG A+
Sbjct: 1243 AHYFIMKSSNIGSIKISQQRGIWSTTPSNETKLSKAFTDDHLIILIFSVQGSGHFQGYAR 1302
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MTS I +W + G FSV+W++ L FH T+H+ NP+N+N V+ISRD
Sbjct: 1303 MTSVISQE-SCQDWDF----LGLGGVFSVEWIQKESLPFHCTQHILNPWNDNKKVQISRD 1357
Query: 382 CQELEPSIGEQLAAL 396
QELEP QL +L
Sbjct: 1358 GQELEPQAAAQLLSL 1372
>gi|195376107|ref|XP_002046838.1| GJ13107 [Drosophila virilis]
gi|194153996|gb|EDW69180.1| GJ13107 [Drosophila virilis]
Length = 706
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A L++AF A NV+LIFSVN + F G A+
Sbjct: 261 TRFFLIKSNNSDNVQLSKSKSVWATLPQNDANLSQAFKEARNVLLIFSVNESGKFAGFAR 320
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 321 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNSWNEGKPVKIG 380
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 381 RDGQEIEPKIGAELCRLFPEDEQIELTPILRKSKETARVMREKGIH 426
>gi|195125998|ref|XP_002007461.1| GI12962 [Drosophila mojavensis]
gi|193919070|gb|EDW17937.1| GI12962 [Drosophila mojavensis]
Length = 698
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 91/166 (54%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A L++AF A NV+LIFSVN + F G A+
Sbjct: 247 TRFFLIKSNNSDNVQLSKSKSVWATLPQNDANLSQAFKEARNVLLIFSVNESGKFAGFAR 306
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 307 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 366
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + EL I ++ + KG++
Sbjct: 367 RDGQEIEPKIGAELCRLFPEDEQIELTPILRKSKETARVMREKGIH 412
>gi|291401719|ref|XP_002717094.1| PREDICTED: splicing factor YT521-B [Oryctolagus cuniculus]
Length = 766
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 394 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 453
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 454 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 513
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 514 RDGQEIELECGTQLCLLF 531
>gi|242013069|ref|XP_002427239.1| splicing factor yt521-B, putative [Pediculus humanus corporis]
gi|212511561|gb|EEB14501.1| splicing factor yt521-B, putative [Pediculus humanus corporis]
Length = 431
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 90/161 (55%), Gaps = 5/161 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ LS +GVW+T NEAKLN+AF + NV+LIFSV + FQG A+
Sbjct: 105 TRFFVIKSNNLENVVLSKAKGVWSTLPQNEAKLNQAFQESRNVLLIFSVKESGKFQGFAR 164
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ V +W G + G F V W+ EL F T HL N +NE PVKI
Sbjct: 165 LHGTSRRDVPPISWVLPPGLSAKALGGVFQVDWICRKELPFTATAHLYNSWNEGKPVKIG 224
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+EP + E+L L P+ E + ++ +E K
Sbjct: 225 RDGQEIEPKVAEELCRLF---PEDENIEMTPILRKSKEASK 262
>gi|195092662|ref|XP_001997660.1| GH24419 [Drosophila grimshawi]
gi|193891561|gb|EDV90427.1| GH24419 [Drosophila grimshawi]
Length = 753
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A L +AF A NV+LIFSVN + F G A+
Sbjct: 279 TRFFLIKSNNIDNVQLSKNKNVWATLPQNDANLTQAFKEARNVLLIFSVNESGKFSGFAR 338
Query: 322 MTSKIGGSVGGGNWKY--AHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M++ + W + + G + W+ EL F+ T HL N +NE PVKI
Sbjct: 339 MSTSSRREIPQVAWVLPPSISSKALGGVIELDWICRKELPFNTTLHLHNSWNEGKPVKIG 398
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + + EL I ++ + KG++
Sbjct: 399 RDGQEIEPKIGAELCRLFPEDDEIELTPILRKSKETARVMREKGIH 444
>gi|198463533|ref|XP_002135520.1| GA28277 [Drosophila pseudoobscura pseudoobscura]
gi|198151298|gb|EDY74147.1| GA28277 [Drosophila pseudoobscura pseudoobscura]
Length = 735
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 2/149 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A LN+AF A NV+LIFSVN + F G A+
Sbjct: 260 TRFFLIKSNNIDNVQLSKGKSVWATLPQNDANLNQAFKEARNVLLIFSVNESGKFAGFAR 319
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + + W + G + W+ ELSF+ T HL N +NE PVKI
Sbjct: 320 MAAPSRRDIPQVAWVLPPSISPKALGGVIELDWICRKELSFNATLHLHNTWNEGKPVKIG 379
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAI 408
RD QE+EP IG +L L + EL I
Sbjct: 380 RDGQEIEPKIGGELCRLFPEDEQIELTPI 408
>gi|195013275|ref|XP_001983824.1| GH15361 [Drosophila grimshawi]
gi|193897306|gb|EDV96172.1| GH15361 [Drosophila grimshawi]
Length = 755
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 2/166 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N++LS + VWAT N+A L +AF A NV+LIFSVN + F G A+
Sbjct: 281 TRFFLIKSNNIDNVQLSKNKNVWATLPQNDANLTQAFKEARNVLLIFSVNESGKFSGFAR 340
Query: 322 MTSKIGGSVGGGNWKY--AHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M++ + W + + G + W+ EL F+ T HL N +NE PVKI
Sbjct: 341 MSTSSRREIPQVAWVLPPSISSKALGGVIELDWICRKELPFNTTLHLHNSWNEGKPVKIG 400
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP IG +L L + + EL I ++ + KG++
Sbjct: 401 RDGQEIEPKIGAELCRLFPEDDEIELTPILRKSKETARVMREKGIH 446
>gi|198435163|ref|XP_002127950.1| PREDICTED: similar to LOC495129 protein [Ciona intestinalis]
Length = 624
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 7/163 (4%)
Query: 264 YFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMT 323
++++KS N EN+ L+ +GVW+T SNEAKLN +F A NVILI+SV + FQG A++
Sbjct: 261 FYLIKSNNHENVALAKARGVWSTPPSNEAKLNRSFREARNVILIYSVRESGAFQGFARLA 320
Query: 324 SKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
++ ++ +W G + G F + WL ELSF KT + N +N N PVKI RD
Sbjct: 321 TEAKHNLSPIDWVLPAGLSAKALGGVFKIDWLCKRELSFAKTTDIYNTFNGNKPVKIGRD 380
Query: 382 CQELEPSIGEQLAALLYLE-PDSELMAISVAAEAKREEEKAKG 423
QE+EP+ G+ +L LE P + + + + R+++KA G
Sbjct: 381 GQEVEPNAGK----VLCLEFPHDDKVDLETIIQRVRKQQKADG 419
>gi|158295035|ref|XP_001688755.1| AGAP005940-PA [Anopheles gambiae str. PEST]
gi|157015844|gb|EDO63761.1| AGAP005940-PA [Anopheles gambiae str. PEST]
Length = 879
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N+ LS +GVW+T NEA LN+AF + NVIL+FSV + F G A+
Sbjct: 369 ARFFLIKSNNHDNVALSKSKGVWSTLPPNEANLNQAFRESRNVILLFSVKESGKFAGFAR 428
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M ++ + +W G + G + W+ EL F T HL N +N++ PVKI
Sbjct: 429 MGAEARRDLPAVDWVLPPGMSAKALGGVIKIDWVCKKELPFTSTSHLYNAWNDDKPVKIG 488
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
RD QE+EP + E+L L +E I + K+ +E +K
Sbjct: 489 RDGQEIEPKVAEELCRLF-----TEDTGIDMTPILKKSKEASK 526
>gi|114051698|ref|NP_001039985.1| YTH domain-containing protein 1 [Bos taurus]
gi|88954297|gb|AAI14070.1| YTH domain containing 1 [Bos taurus]
Length = 717
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|296486494|tpg|DAA28607.1| TPA: splicing factor YT521-B [Bos taurus]
Length = 718
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|91092310|ref|XP_969804.1| PREDICTED: similar to splicing factor yt521-b [Tribolium castaneum]
gi|270015693|gb|EFA12141.1| hypothetical protein TcasGA2_TC002288 [Tribolium castaneum]
Length = 435
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 93/166 (56%), Gaps = 7/166 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 107 ARFFVIKSNNAENITLSKAKGVWSTLPQNEANLNKAYRESRNVLLIFSVKESGKFAGFAR 166
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ S+ V +W G + G F V W+ EL F T HL NP+N+ PVKI
Sbjct: 167 LHSESRHDVPAISWVLPPGLSAKALGGVFKVDWICRKELPFSNTMHLYNPWNDGKPVKIG 226
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP + E+L L P+ E I V + +E AK N
Sbjct: 227 RDGQEIEPRVAEELCRLF---PEDE--GIEVTPILRLAKEAAKKNN 267
>gi|148706022|gb|EDL37969.1| mCG1787 [Mus musculus]
Length = 727
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 355 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 414
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 415 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 474
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 475 RDGQEIELECGTQLCLLF 492
>gi|301788168|ref|XP_002929502.1| PREDICTED: YTH domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 730
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 358 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 417
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 418 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 477
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 478 RDGQEIELECGTQLCLLF 495
>gi|426231784|ref|XP_004009917.1| PREDICTED: YTH domain-containing protein 1 [Ovis aries]
Length = 728
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|410957494|ref|XP_003985362.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Felis catus]
Length = 711
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 339 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 398
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 399 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 458
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 459 RDGQEIELECGTQLCLLF 476
>gi|410957492|ref|XP_003985361.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Felis catus]
Length = 729
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 357 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 416
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 417 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 476
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 477 RDGQEIELECGTQLCLLF 494
>gi|16551831|dbj|BAB71181.1| unnamed protein product [Homo sapiens]
Length = 658
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 286 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 345
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 346 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 405
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 406 RDGQEIELECGTQLCLLF 423
>gi|2696611|dbj|BAA23885.1| RNA splicing-related protein [Rattus norvegicus]
Length = 712
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 90/152 (59%), Gaps = 4/152 (2%)
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307
+QT++ + L +R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILI
Sbjct: 328 DQTSKLKSVLQD--ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILI 385
Query: 308 FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRH 365
FSV + FQG A+++S+ +W G + G F + W+ EL F K+ H
Sbjct: 386 FSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAH 445
Query: 366 LRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L NP+NE+ PVKI RD QE+E G QL L
Sbjct: 446 LTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 477
>gi|403280911|ref|XP_003931948.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 710
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 338 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 397
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 398 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 457
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 458 RDGQEIELECGTQLCLLF 475
>gi|395542697|ref|XP_003773262.1| PREDICTED: YTH domain-containing protein 1 [Sarcophilus harrisii]
Length = 696
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 324 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 383
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 384 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 443
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 444 RDGQEIELECGTQLCLLF 461
>gi|281338976|gb|EFB14560.1| hypothetical protein PANDA_019686 [Ailuropoda melanoleuca]
Length = 721
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 349 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 408
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 409 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 468
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 469 RDGQEIELECGTQLCLLF 486
>gi|149751625|ref|XP_001501576.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Equus
caballus]
Length = 730
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 358 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 417
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 418 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 477
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 478 RDGQEIELECGTQLCLLF 495
>gi|359321086|ref|XP_532391.4| PREDICTED: YTH domain-containing protein 1 isoform 1 [Canis lupus
familiaris]
Length = 817
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 445 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 504
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 505 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 564
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 565 RDGQEIELECGTQLCLLF 582
>gi|158295037|ref|XP_315971.4| AGAP005940-PB [Anopheles gambiae str. PEST]
gi|157015845|gb|EAA11066.4| AGAP005940-PB [Anopheles gambiae str. PEST]
Length = 790
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 91/163 (55%), Gaps = 7/163 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N+ LS +GVW+T NEA LN+AF + NVIL+FSV + F G A+
Sbjct: 323 ARFFLIKSNNHDNVALSKSKGVWSTLPPNEANLNQAFRESRNVILLFSVKESGKFAGFAR 382
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M ++ + +W G + G + W+ EL F T HL N +N++ PVKI
Sbjct: 383 MGAEARRDLPAVDWVLPPGMSAKALGGVIKIDWVCKKELPFTSTSHLYNAWNDDKPVKIG 442
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
RD QE+EP + E+L L +E I + K+ +E +K
Sbjct: 443 RDGQEIEPKVAEELCRLF-----TEDTGIDMTPILKKSKEASK 480
>gi|126331593|ref|XP_001366725.1| PREDICTED: YTH domain-containing protein 1 [Monodelphis domestica]
Length = 701
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 329 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 388
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 389 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 448
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 449 RDGQEIELECGTQLCLLF 466
>gi|63995069|gb|AAY41024.1| unknown [Homo sapiens]
Length = 658
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 286 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 345
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 346 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 405
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 406 RDGQEIELECGTQLCLLF 423
>gi|94536805|ref|NP_588611.2| YTH domain-containing protein 1 isoform 2 [Homo sapiens]
gi|31808095|gb|AAH53863.1| YTH domain containing 1 [Homo sapiens]
gi|119625976|gb|EAX05571.1| YTH domain containing 1, isoform CRA_b [Homo sapiens]
Length = 709
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 337 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 396
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 397 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 456
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 457 RDGQEIELECGTQLCLLF 474
>gi|348556007|ref|XP_003463814.1| PREDICTED: YTH domain-containing protein 1-like [Cavia porcellus]
Length = 683
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 355 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 414
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 415 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 474
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 475 RDGQEIELECGTQLCLLF 492
>gi|327275289|ref|XP_003222406.1| PREDICTED: YTH domain-containing protein 1-like isoform 2 [Anolis
carolinensis]
Length = 693
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307
+QT+R L R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILI
Sbjct: 311 DQTSRLKYILQDA--RFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILI 368
Query: 308 FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRH 365
FSV + FQG A++ S+ +W G G F + W+ EL F K+ H
Sbjct: 369 FSVRESGKFQGFARLASESHHGGSPIHWVLPAGMNARMLGGVFKIDWICRRELPFTKSSH 428
Query: 366 LRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L NP+NE+ PVKI RD QE+E G QL L
Sbjct: 429 LTNPWNEHKPVKIGRDGQEIEIECGTQLCLLF 460
>gi|72534750|ref|NP_001026902.1| YTH domain-containing protein 1 isoform 1 [Homo sapiens]
gi|47606762|sp|Q96MU7.3|YTDC1_HUMAN RecName: Full=YTH domain-containing protein 1; AltName:
Full=Putative splicing factor YT521
gi|45708780|gb|AAH41119.1| YTH domain containing 1 [Homo sapiens]
gi|119625975|gb|EAX05570.1| YTH domain containing 1, isoform CRA_a [Homo sapiens]
gi|168275580|dbj|BAG10510.1| YTH domain-containing protein 1 [synthetic construct]
Length = 727
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 355 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 414
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 415 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 474
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 475 RDGQEIELECGTQLCLLF 492
>gi|332819685|ref|XP_003310416.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Pan
troglodytes]
gi|397478308|ref|XP_003810492.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Pan paniscus]
Length = 709
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 337 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 396
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 397 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 456
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 457 RDGQEIELECGTQLCLLF 474
>gi|403280909|ref|XP_003931947.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 728
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|47199414|emb|CAF88528.1| unnamed protein product [Tetraodon nigroviridis]
Length = 147
Score = 112 bits (280), Expect = 7e-22, Method: Composition-based stats.
Identities = 66/141 (46%), Positives = 90/141 (63%), Gaps = 7/141 (4%)
Query: 258 PQGIS--RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRH 315
P G+S RYFI+KS N ++++S Q+G+W+T SNE+KL++AF VILIFSV + H
Sbjct: 8 PPGLSSARYFIMKSSNSGSIKISQQKGIWSTTTSNESKLSKAFVEDHLVILIFSVQGSGH 67
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
FQG A+MTS I +W G FSV+WL+ + FH T+H+ NP+N++
Sbjct: 68 FQGYARMTSVISQE-SCQDWD----VLGLGGVFSVEWLQKESIPFHCTQHILNPWNDSKK 122
Query: 376 VKISRDCQELEPSIGEQLAAL 396
V+ISRD QELEP QL AL
Sbjct: 123 VQISRDGQELEPQAAAQLLAL 143
>gi|387543076|gb|AFJ72165.1| YTH domain-containing protein 1 isoform 2 [Macaca mulatta]
Length = 710
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 338 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 397
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 398 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 457
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 458 RDGQEIELECGTQLCLLF 475
>gi|297292811|ref|XP_002804145.1| PREDICTED: YTH domain-containing protein 1-like isoform 2 [Macaca
mulatta]
Length = 710
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 338 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 397
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 398 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 457
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 458 RDGQEIELECGTQLCLLF 475
>gi|426344480|ref|XP_004038792.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 713
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 341 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 400
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 401 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 460
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 461 RDGQEIELECGTQLCLLF 478
>gi|402869684|ref|XP_003898879.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Papio anubis]
Length = 710
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 338 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 397
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 398 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 457
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 458 RDGQEIELECGTQLCLLF 475
>gi|149035125|gb|EDL89829.1| splicing factor YT521-B, isoform CRA_b [Rattus norvegicus]
Length = 712
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 340 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 399
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 400 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 459
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 460 RDGQEIELECGTQLCLLF 477
>gi|417412438|gb|JAA52606.1| Putative signal transduction protein involved in rna splicing,
partial [Desmodus rotundus]
Length = 719
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 339 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 398
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 399 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 458
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 459 RDGQEIELECGTQLCLLF 476
>gi|395857246|ref|XP_003801016.1| PREDICTED: YTH domain-containing protein 1 [Otolemur garnettii]
Length = 709
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 337 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 396
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 397 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 456
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 457 RDGQEIELECGTQLCLLF 474
>gi|417412407|gb|JAA52592.1| Putative signal transduction protein involved in rna splicing,
partial [Desmodus rotundus]
Length = 711
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 339 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 398
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 399 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 458
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 459 RDGQEIELECGTQLCLLF 476
>gi|327275287|ref|XP_003222405.1| PREDICTED: YTH domain-containing protein 1-like isoform 1 [Anolis
carolinensis]
Length = 711
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 4/152 (2%)
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307
+QT+R L R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILI
Sbjct: 329 DQTSRLKYILQDA--RFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILI 386
Query: 308 FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRH 365
FSV + FQG A++ S+ +W G G F + W+ EL F K+ H
Sbjct: 387 FSVRESGKFQGFARLASESHHGGSPIHWVLPAGMNARMLGGVFKIDWICRRELPFTKSSH 446
Query: 366 LRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L NP+NE+ PVKI RD QE+E G QL L
Sbjct: 447 LTNPWNEHKPVKIGRDGQEIEIECGTQLCLLF 478
>gi|390460825|ref|XP_003732542.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain-containing protein
1-like [Callithrix jacchus]
Length = 724
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 352 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFAR 411
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 412 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 471
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 472 RDGQEIELECGTQLCLLF 489
>gi|426344478|ref|XP_004038791.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Gorilla
gorilla gorilla]
Length = 731
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 359 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 418
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 419 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 478
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 479 RDGQEIELECGTQLCLLF 496
>gi|402869682|ref|XP_003898878.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Papio anubis]
Length = 728
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|355687388|gb|EHH25972.1| Putative splicing factor YT521 [Macaca mulatta]
gi|355749371|gb|EHH53770.1| Putative splicing factor YT521 [Macaca fascicularis]
Length = 728
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|297292809|ref|XP_001098270.2| PREDICTED: YTH domain-containing protein 1-like isoform 1 [Macaca
mulatta]
Length = 728
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|114594504|ref|XP_517262.2| PREDICTED: YTH domain-containing protein 1 isoform 2 [Pan
troglodytes]
gi|397478306|ref|XP_003810491.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Pan paniscus]
Length = 727
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 355 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 414
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 415 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 474
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 475 RDGQEIELECGTQLCLLF 492
>gi|19173798|ref|NP_596914.1| YTH domain-containing protein 1 [Rattus norvegicus]
gi|28380115|sp|Q9QY02.1|YTDC1_RAT RecName: Full=YTH domain-containing protein 1; AltName:
Full=Putative splicing factor YT521; AltName:
Full=RA301-binding protein
gi|5917651|gb|AAD55973.1|AF144731_1 putative splicing factor YT521-B [Rattus norvegicus]
Length = 738
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 4/152 (2%)
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILI 307
+QT++ + L R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILI
Sbjct: 346 DQTSKLKSVLQDA--RFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILI 403
Query: 308 FSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRH 365
FSV + FQG A+++S+ +W G + G F + W+ EL F K+ H
Sbjct: 404 FSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAH 463
Query: 366 LRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
L NP+NE+ PVKI RD QE+E G QL L
Sbjct: 464 LTNPWNEHKPVKIGRDGQEIELECGTQLCLLF 495
>gi|441624725|ref|XP_003268477.2| PREDICTED: LOW QUALITY PROTEIN: YTH domain-containing protein 1
[Nomascus leucogenys]
Length = 730
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 358 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 417
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 418 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 477
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 478 RDGQEIELECGTQLCLLF 495
>gi|344288432|ref|XP_003415954.1| PREDICTED: YTH domain-containing protein 1 isoform 2 [Loxodonta
africana]
Length = 704
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 332 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 391
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 392 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 451
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 452 RDGQEIELECGTQLCLLF 469
>gi|380800953|gb|AFE72352.1| YTH domain-containing protein 1 isoform 2, partial [Macaca mulatta]
Length = 472
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 100 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 159
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 160 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 219
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 220 RDGQEIELECGTQLCLLF 237
>gi|149035126|gb|EDL89830.1| splicing factor YT521-B, isoform CRA_c [Rattus norvegicus]
Length = 738
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 358 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 417
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 418 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 477
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 478 RDGQEIELECGTQLCLLF 495
>gi|390349896|ref|XP_783255.3| PREDICTED: YTH domain-containing protein 1-like [Strongylocentrotus
purpuratus]
Length = 462
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 2/149 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYF++KS N EN+ L+ +GVW+T NE +LN AF A NV+LIFSV + FQG A+
Sbjct: 69 ARYFLIKSNNHENIALAKAKGVWSTLPYNEQRLNAAFREARNVLLIFSVKESGKFQGFAR 128
Query: 322 MTSKIGGSVGGGNWKYAHGT--AHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M + NW +G + G F V W+ EL F KT HL NP+N++ PVKI
Sbjct: 129 MRCESRRDGQPINWVLPNGMNRSILGGVFKVDWITRNELPFTKTTHLYNPWNDSKPVKIG 188
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAI 408
RD QE+E GE + L + + +++ I
Sbjct: 189 RDGQEIESKCGESVCRLFPRDENIDVVEI 217
>gi|149035124|gb|EDL89828.1| splicing factor YT521-B, isoform CRA_a [Rattus norvegicus]
Length = 628
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 256 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 315
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 316 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 375
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 376 RDGQEIELECGTQLCLLF 393
>gi|344288430|ref|XP_003415953.1| PREDICTED: YTH domain-containing protein 1 isoform 1 [Loxodonta
africana]
Length = 722
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 350 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 409
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 410 LSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 469
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 470 RDGQEIELECGTQLCLLF 487
>gi|124430549|ref|NP_808348.2| YTH domain containing 1 [Mus musculus]
Length = 736
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 356 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 415
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 416 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 475
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 476 RDGQEIELECGTQLCLLF 493
>gi|354496794|ref|XP_003510510.1| PREDICTED: YTH domain-containing protein 1-like [Cricetulus
griseus]
Length = 743
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 373 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 432
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 433 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 492
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 493 RDGQEIELECGTQLCLLF 510
>gi|50511209|dbj|BAD32590.1| mKIAA1966 protein [Mus musculus]
Length = 507
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 135 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 194
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 195 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 254
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 255 RDGQEIELECGTQLCLLF 272
>gi|443683950|gb|ELT88031.1| hypothetical protein CAPTEDRAFT_225537 [Capitella teleta]
Length = 617
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 98/168 (58%), Gaps = 9/168 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG--- 318
+R+F++KS N EN+ L+ +GVW+T NE+KLN+AF NVIL+FSV + +QG
Sbjct: 263 ARFFLIKSNNHENVALAKAKGVWSTPPQNESKLNQAFRQCSNVILVFSVKESGKYQGDFF 322
Query: 319 --C-AKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNEN 373
C A++ S+ + W G N F + W+ +LSF T HL NP+NEN
Sbjct: 323 ISCFARLASESDKTHPPIRWVLPPGLGQRAFNGVFKLDWINRKDLSFSNTMHLHNPWNEN 382
Query: 374 LPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISV-AAEAKREEEK 420
PVKI RD QE+EP GE L L + + +L I++ A +A R++E+
Sbjct: 383 KPVKIGRDGQEVEPQCGEALCRLFPPDTNVDLRTIALKAKKAHRQKER 430
>gi|18916821|dbj|BAB85552.1| KIAA1966 protein [Homo sapiens]
Length = 480
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 108 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 167
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 168 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 227
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 228 RDGQEIELECGTQLCLLF 245
>gi|380800951|gb|AFE72351.1| YTH domain-containing protein 1 isoform 1, partial [Macaca mulatta]
Length = 490
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 118 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 177
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 178 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 237
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 238 RDGQEIELECGTQLCLLF 255
>gi|367040263|ref|XP_003650512.1| hypothetical protein THITE_2110044 [Thielavia terrestris NRRL 8126]
gi|346997773|gb|AEO64176.1| hypothetical protein THITE_2110044 [Thielavia terrestris NRRL 8126]
Length = 766
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+FIVKS N EN+ ++ +W TQ N +EAF +NVIL FSVN++R FQG
Sbjct: 575 KGDTRFFIVKSFNEENVRSCMEDSLWTTQVQNGPTFSEAFAKCKNVILFFSVNKSRAFQG 634
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A+M S W H + F V+WL +SF++ HL+N YNE+LPV
Sbjct: 635 YARMASAPSPDTPSPRWLRG---LHLDTSDPFRVQWLSKKSVSFYRIGHLKNSYNESLPV 691
Query: 377 KISRDCQELEPSIGEQLAALL 397
+ +D QE+EP G AALL
Sbjct: 692 LVGKDGQEIEPECG---AALL 709
>gi|344244086|gb|EGW00190.1| YTH domain-containing protein 1 [Cricetulus griseus]
Length = 667
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 329 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 388
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 389 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 448
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+E G QL L
Sbjct: 449 RDGQEIELECGTQLCLLF 466
>gi|197100298|ref|NP_001125792.1| YTH domain-containing protein 1 [Pongo abelii]
gi|55729205|emb|CAH91339.1| hypothetical protein [Pongo abelii]
Length = 482
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 86/141 (60%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 287 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 346
Query: 322 MTSKIGGSVGGG---NWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
++S+ S GG +W G + G F + W+ EL F K+ HL NP+NE+ PV
Sbjct: 347 LSSE---SHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPV 403
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE+E G QL L
Sbjct: 404 KIGRDGQEIELECGTQLCLLF 424
>gi|417402552|gb|JAA48121.1| Putative signal transduction protein involved in rna splicing
[Desmodus rotundus]
Length = 544
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 349 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 408
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
++S+ S GG +W G G F + W+ EL F K+ HL NP+NE+ PV
Sbjct: 409 LSSE---SHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPV 465
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE+E G QL L
Sbjct: 466 KIGRDGQEIELECGTQLCLLF 486
>gi|312378545|gb|EFR25093.1| hypothetical protein AND_09884 [Anopheles darlingi]
Length = 1025
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 85/149 (57%), Gaps = 2/149 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N +N+ LS +GVW+T NEA LN+AF + NVIL+FSV + F G A+
Sbjct: 477 TRFFLIKSNNHDNVSLSKAKGVWSTLPPNEANLNQAFQESRNVILLFSVKESGKFAGFAR 536
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M ++ + +W G + G + W+ +L F T HL N +N++ PVKI
Sbjct: 537 MAAEARRDLPAVDWVLPPGMSAKALGGVIKIDWVCKRDLPFTSTTHLYNAWNDDKPVKIG 596
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAI 408
RD QE+EP + E+L L + E+ I
Sbjct: 597 RDGQEIEPKVAEELCRLFPEDTSIEMTPI 625
>gi|156381166|ref|XP_001632137.1| predicted protein [Nematostella vectensis]
gi|156219188|gb|EDO40074.1| predicted protein [Nematostella vectensis]
Length = 173
Score = 110 bits (276), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/95 (50%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H SG ++ VC+HWLR LC KGD C FLHQYD ++MP C F+ FGEC +
Sbjct: 53 AYCPFRHTSGEKT---VVCKHWLRGLCKKGDQCEFLHQYDMTKMPECYFYSKFGECSNKK 109
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C Y H + IK+C Y GFC +GP CR+RHV+
Sbjct: 110 CQYLHIDPQSKIKDCPWYDRGFCKHGPHCRHRHVR 144
>gi|355729587|gb|AES09917.1| YTH domain containing 1 [Mustela putorius furo]
Length = 295
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 85/141 (60%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 117 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVILIFSVRESGKFQGFAR 176
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
++S+ S GG +W G G F + W+ EL F K+ HL NP+NE+ PV
Sbjct: 177 LSSE---SHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPV 233
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE+E G QL L
Sbjct: 234 KIGRDGQEIELECGTQLCLLF 254
>gi|296415318|ref|XP_002837337.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633201|emb|CAZ81528.1| unnamed protein product [Tuber melanosporum]
Length = 1090
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 82/136 (60%), Gaps = 2/136 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYF+VKS N +N++++ + +WATQ+ N EAF ++ +VIL+FSVN++ FQG A+
Sbjct: 941 TRYFVVKSFNHDNVKMAQKDELWATQKKNSETFEEAFKTSRDVILVFSVNKSGKFQGYAR 1000
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M S G+ W G F ++W+ + +++FH+ HL N NE+ PV I RD
Sbjct: 1001 MES-APGTAPVPTWAKNLLWESSG-PFRIRWVTINDINFHRVAHLTNRLNEDQPVLIGRD 1058
Query: 382 CQELEPSIGEQLAALL 397
QE++P G L L+
Sbjct: 1059 GQEIDPECGAALCRLI 1074
>gi|291234476|ref|XP_002737176.1| PREDICTED: splicing factor YT521-B-like [Saccoglossus kowalevskii]
Length = 763
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 109/206 (52%), Gaps = 20/206 (9%)
Query: 211 KSSTAESAN--VHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVK 268
+SS AES + HQ+ V Q Q+++ + L R+A RYF+VK
Sbjct: 352 RSSKAESGSEGTHQKSTVSSSVSQKDQSSKQKYLL--------RDA--------RYFLVK 395
Query: 269 SCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGG 328
S N EN+ L+ +GVW+T +NE +LN+AF + NV+LIFSV + FQG A+++S+
Sbjct: 396 SNNHENVALAKAKGVWSTPPNNEQRLNKAFKESCNVLLIFSVKESGKFQGYARLSSESRR 455
Query: 329 SVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 386
NW G A G F + W+ +L F KT L N +N+N VKI RD QE+E
Sbjct: 456 DGPTVNWVLPVGLSKAALGGVFKIDWITRQDLPFSKTAQLYNFWNDNKQVKIGRDGQEIE 515
Query: 387 PSIGEQLAALLYLEPDSELMAISVAA 412
P G +L + ++ + +L I A
Sbjct: 516 PRCGAELCKMFPVDVNIDLSPIVSKA 541
>gi|156094157|ref|XP_001613116.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148801990|gb|EDL43389.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 290
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 113/230 (49%), Gaps = 26/230 (11%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+++F++KS + +N+ +S+ +WAT NE K AF + V+LIFSVN + F G A
Sbjct: 19 TKFFLIKSSSDKNISISLNFNIWATTPKNEHKFVSAFTENDYVVLIFSVNGSSKFCGYAV 78
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M S G S + Y GRNF ++W+++ ++SF + HL+N NEN P+K+ RD
Sbjct: 79 MQSMPGESQNSNVYFYYDDKIFRGRNFDIQWIRVVDVSFQEVSHLKNSLNENKPIKVGRD 138
Query: 382 CQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPFEDN 441
QE+E G +L + +++ ++++ A+ +EE N
Sbjct: 139 GQEIERMAGIKLCEIF----EAKYLSMATCADQGAQEE------------------VHSN 176
Query: 442 EEEEEEESEEEEESLGTASQGRGRGRGMMWPGPMPLARGARPVPGMRGFP 491
+ + S++ +S T+S G ++ P RGA ++ FP
Sbjct: 177 QANQSNHSKQTNQSKQTSSTTHEAGANLLASSP----RGAEKRDSVKLFP 222
>gi|340938956|gb|EGS19578.1| hypothetical protein CTHT_0040560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 723
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+FIVKS N EN+ ++ G+W TQ N L++AF +NVIL FS+N++R FQG
Sbjct: 567 KGDTRFFIVKSFNEENVRRCMEDGIWTTQVQNGEILSDAFSKCKNVILFFSINKSRAFQG 626
Query: 319 CAKMTSKIG------GSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNE 372
A+M S + G +W H F V+WL + F + +++NPYNE
Sbjct: 627 YARMASAPSPDTPRPKWMSGLHWDSTHP-------FRVQWLSKTPVEFWRIGNIKNPYNE 679
Query: 373 NLPVKISRDCQELEPSIGEQL 393
NLPV + +D QELE G L
Sbjct: 680 NLPVLVGKDGQELEEECGRSL 700
>gi|159164852|pdb|2YUD|A Chain A, Solution Structure Of The Yth Domain In Yth Domain-
Containing Protein 1 (Putative Splicing Factor Yt521)
Length = 180
Score = 108 bits (271), Expect = 7e-21, Method: Composition-based stats.
Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 26 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 85
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G + G F + W+ EL F K+ HL NP+NE+ PVKI
Sbjct: 86 LSSESHHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIG 145
Query: 380 RDCQELEPSIGEQLAALLYLEPDSEL 405
RD QE+E G QL L PD +
Sbjct: 146 RDGQEIELECGTQLC--LLFPPDESI 169
>gi|351700093|gb|EHB03012.1| YTH domain-containing protein 1 [Heterocephalus glaber]
Length = 696
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 63/142 (44%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+
Sbjct: 333 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFAR 392
Query: 322 MTSKI--GGS----VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
+ S+ GGS V G F + W+ EL F K+ HL NP+NE+ P
Sbjct: 393 LCSESHHGGSPIHWVLPXXXXXXXSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKP 452
Query: 376 VKISRDCQELEPSIGEQLAALL 397
VKI RD QE+E G QL L
Sbjct: 453 VKIGRDGQEIELECGTQLCLLF 474
>gi|307183182|gb|EFN70091.1| YTH domain-containing protein 1 [Camponotus floridanus]
Length = 453
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+L+FSV + F G A+
Sbjct: 116 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLVFSVKESGKFAGFAR 175
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ G +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 176 LSTESRRDAGPVSWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 235
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP + E+L L
Sbjct: 236 RDGQEIEPRVAEELCRLF 253
>gi|313226222|emb|CBY21365.1| unnamed protein product [Oikopleura dioica]
gi|313240347|emb|CBY32689.1| unnamed protein product [Oikopleura dioica]
gi|313245371|emb|CBY40122.1| unnamed protein product [Oikopleura dioica]
Length = 202
Score = 108 bits (270), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKE 131
+ VC+HWLR LC KGD C FLH+YD ++MP C FF FG C +DC Y H N +KE
Sbjct: 64 KHVVCKHWLRGLCKKGDDCEFLHEYDMAKMPECYFFSKFGRCENRDCQYLHIDPNSKVKE 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFC +GP C+ RHV+
Sbjct: 124 CQWYARGFCKHGPMCKSRHVR 144
>gi|307212497|gb|EFN88228.1| YTH domain-containing protein 1 [Harpegnathos saltator]
Length = 453
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 7/166 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 116 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYKESRNVLLIFSVKESGKFAGFAR 175
Query: 322 MTSKIGGSVGGGNWKYAHGTAH--YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 176 LSTESRRDGAPISWVLPPGLSAKVLGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 235
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+EP + E+L L P+ E I + ++ +E K V
Sbjct: 236 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAGKHVT 276
>gi|332025281|gb|EGI65452.1| YTH domain-containing protein 1 [Acromyrmex echinatior]
Length = 451
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 2/138 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+L+FSV + F G A+
Sbjct: 116 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLVFSVKESGKFAGFAR 175
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ ++ G +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 176 LCTESRRDAGPVSWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 235
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+EP + E+L L
Sbjct: 236 RDGQEIEPRVAEELCRLF 253
>gi|345479247|ref|XP_001604858.2| PREDICTED: YTH domain-containing protein 1-like [Nasonia
vitripennis]
Length = 481
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 27/225 (12%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 133 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRGSRNVLLIFSVKESGKFAGFAR 192
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 193 LSTESRRDGTSISWVLPPGLSAKALGGVFKVDWICRKELPFTSTLHLYNPWNDGKQVKIG 252
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPFE 439
RD QE+EP + E+L L P+ E I + ++ +E AK V + P
Sbjct: 253 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAAKYV----------VKPVT 297
Query: 440 DNEEEEEEESEEEEESLGTAS--QGRGRGRGMMWPGPMPLARGAR 482
N E ++ T+ + RGRGR + LA AR
Sbjct: 298 RN--------HRENRTVITSRFIRTRGRGRRLFLTSRSRLASLAR 334
>gi|389583501|dbj|GAB66236.1| rat BRAIN protein-like [Plasmodium cynomolgi strain B]
Length = 307
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 254 ATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRT 313
AT +++F++KS + +N+ +S+ +WAT NE K AF + VILIFSVN +
Sbjct: 8 ATHYTSARTKFFLIKSSSDKNISISLNFNIWATTPKNEQKFVSAFMDNDYVILIFSVNGS 67
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A M S G S + Y GRNF ++W+++ ++SF + HL+N NEN
Sbjct: 68 SKFCGYAVMQSMPGESQNSNVYFYYDDKIFRGRNFDIQWIRVVDVSFQEVSHLKNSLNEN 127
Query: 374 LPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEE 419
P+K+ RD QE+E G +L + +++ ++++ +A+ +EE
Sbjct: 128 KPIKVGRDGQEIERMAGIKLCEVF----EAKYLSMASSADQAAQEE 169
>gi|322785605|gb|EFZ12260.1| hypothetical protein SINV_06827 [Solenopsis invicta]
Length = 457
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 81/137 (59%), Gaps = 2/137 (1%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+L+FSV + F G A++
Sbjct: 121 KFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLVFSVKESGKFAGFARL 180
Query: 323 TSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
+++ G +W G + G F V W+ EL F T HL NP+N+ VKI R
Sbjct: 181 STESRRDAGPVSWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIGR 240
Query: 381 DCQELEPSIGEQLAALL 397
D QE+EP + E+L L
Sbjct: 241 DGQEIEPRVAEELCRLF 257
>gi|334349686|ref|XP_001369644.2| PREDICTED: YTH domain-containing protein 1-like [Monodelphis
domestica]
Length = 605
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 227 ARFFLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 286
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 287 LCSE---SHHGGPPIHWVLPEGMNLKTLGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 343
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 344 KIGRDGQEVDLECATELCLLF 364
>gi|224003915|ref|XP_002291629.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973405|gb|EED91736.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]
Length = 103
Score = 106 bits (264), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/81 (58%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE-DIKE 131
R VCRHWLR LCMKG AC FLHQYD S+MP+CR C+ +DC ++H NE D E
Sbjct: 2 LRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPLCRH---GDRCKVKDCPFRHINEADRLE 58
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFC +GP CRYRHV+
Sbjct: 59 CVFYSQGFCIHGPFCRYRHVR 79
>gi|334313139|ref|XP_001362659.2| PREDICTED: hypothetical protein LOC100009979 [Monodelphis
domestica]
Length = 658
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 280 ARFFLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 339
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 340 LCSE---SHHGGPPIHWVLPEGMNLKTLGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 396
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 397 KIGRDGQEVDLECATELCLLF 417
>gi|334313137|ref|XP_001362567.2| PREDICTED: YTH domain-containing protein 1-like [Monodelphis
domestica]
Length = 658
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 280 ARFFLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 339
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 340 LCSE---SHHGGPPIHWVLPEGMNLKTLGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 396
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 397 KIGRDGQEVDLECATELCLLF 417
>gi|334313135|ref|XP_001362487.2| PREDICTED: hypothetical protein LOC100009887 [Monodelphis
domestica]
Length = 658
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 280 ARFFLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 339
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 340 LCSE---SHHGGPPIHWVLPEGMNLKTLGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 396
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 397 KIGRDGQEVDLECATELCLLF 417
>gi|47216984|emb|CAG04926.1| unnamed protein product [Tetraodon nigroviridis]
Length = 592
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 13/157 (8%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +GVW+T NE KLN AF +A +VIL+FSV + FQG A+
Sbjct: 194 ARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRAARSVILVFSVRESGKFQGFAR 253
Query: 322 MTSKIGGSVGGGNWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ +W G G F + WL EL F KT HL NP+NE+ PVKI
Sbjct: 254 LSSESNHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFTKTAHLSNPWNEHKPVKIG 313
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
RD QE LL LE + + +++ +A+R
Sbjct: 314 RDGQE-----------LLSLEFRNRGLTLTLQTKAER 339
>gi|334313141|ref|XP_001362747.2| PREDICTED: YTH domain-containing protein 1-like [Monodelphis
domestica]
Length = 658
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 280 ARFFLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 339
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 340 LCSE---SHHGGPPIHWVLPEGMNLKTVGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 396
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 397 KIGRDGQEVDLECATELCLLF 417
>gi|193608337|ref|XP_001948690.1| PREDICTED: hypothetical protein LOC100162069 [Acyrthosiphon pisum]
Length = 379
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 94/177 (53%), Gaps = 11/177 (6%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+EL+ + W+T+ NE KLN+AF + +NVILIFSV + F G A+
Sbjct: 99 ARFFIIKSNNYENIELAKIKNCWSTRPWNETKLNQAFRTCKNVILIFSVKESGKFAGFAR 158
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
++ + W G+ + F V W+ EL F+ T HL N YNE VKI+RD
Sbjct: 159 ISEAARYDLSPVGWVLL-GSRNLSGVFKVDWITTKELEFNDTSHLYNAYNEGKTVKIARD 217
Query: 382 CQELEPSIGEQLAALLYLEPDSELMAI---------SVAAEAKREEEKAKGVNPDNG 429
QE++ G QL ++ + + I S++ R+ + G+ PD G
Sbjct: 218 GQEVDAKTGLQLCSMFLEDKSIDFQYILKKAKNHQPSISTAELRQRRRVLGL-PDEG 273
>gi|344291043|ref|XP_003417246.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and
polyadenylation specificity factor subunit 4-like
protein-like [Loxodonta africana]
Length = 185
Score = 105 bits (263), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/91 (49%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H SG R+ VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDSGGRT---VVCKHWLRGLCKKGDQCHFLHQYDVARMPECYFYSKFGDCNNKECSF 112
Query: 123 KHTN--EDIKECNMYKLGFCPNGPDCRYRHV 151
H ++C Y GFC NGP C+YRH+
Sbjct: 113 LHVKPASKTQDCPWYDQGFCKNGPLCKYRHI 143
>gi|298708127|emb|CBJ30469.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 684
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P + R FR VCRHWLR LCM GD+CG+LH+ D++RMP+CR+ +C+ +
Sbjct: 19 ALPPTSLGNTRDRFRTQVCRHWLRGLCMIGDSCGYLHKMDRNRMPICRW---RTDCQVEG 75
Query: 120 CVYKHTNE-DIKECNMYKLGFCPNGPDCRYRHVK 152
C ++H E + EC MY+ GFC GP CR+RHVK
Sbjct: 76 CAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVK 109
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F+++S N +NL +S Q W +R N N AFD F+VN++ +FQGCA+
Sbjct: 246 ARFFVLRSLNHDNLAVSAVQNKWYARRFNIMPFNSAFDGPGRAFFFFTVNQSNNFQGCAE 305
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MTS++ +G FSVKWL+LCEL F ++NP +NLP+ +
Sbjct: 306 MTSRV-PQMG------PRTEEEQVMEFSVKWLRLCELPFSVASQVKNPSQDNLPIWRASH 358
Query: 382 CQELEPSIGEQLAALLYLEPDSEL 405
E+ G +L L++ +P+ +L
Sbjct: 359 GMEIPYEAGRKLCKLMWAQPEIDL 382
>gi|402085439|gb|EJT80337.1| hypothetical protein GGTG_00338 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 749
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGC 319
G +R+F +KS N N+ S+++G+W TQ N L+EA+ S++NV+L FSVN + FQG
Sbjct: 569 GETRFFAIKSFNDANIHTSIKEGLWTTQPQNVKPLSEAYASSKNVLLFFSVNDSGAFQGY 628
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S+ NW + F ++WL + F +HLRNP N+NL V+I
Sbjct: 629 ARMCGTPDSSIDPPNWADIN-ERRLSPPFRIQWLSTTAILFKHIKHLRNPLNKNLSVQIG 687
Query: 380 RDCQELEPSIGEQLAALLYLE-PDSELMAISV 410
+D QE+ G LA L +E P E AI V
Sbjct: 688 KDGQEIAEPTG--LALLDLMETPVCERKAIWV 717
>gi|340378269|ref|XP_003387650.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Amphimedon queenslandica]
Length = 277
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 55/82 (67%), Gaps = 3/82 (3%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED---IK 130
R VC+HWLR LC KGD C FLH+YD RMPVC FF+ FGEC +DC + H + D +K
Sbjct: 65 RVIVCKHWLRQLCNKGDECEFLHEYDMGRMPVCYFFQKFGECNNKDCQFMHVDADTLKVK 124
Query: 131 ECNMYKLGFCPNGPDCRYRHVK 152
+C Y GFC +GP CR RH +
Sbjct: 125 DCPWYDRGFCKHGPSCRNRHTR 146
>gi|74268102|gb|AAI02815.1| YTHDC1 protein [Bos taurus]
Length = 376
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 84/152 (55%), Gaps = 2/152 (1%)
Query: 267 VKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
+KS N EN+ L+ +GVW+T NE KLN AF SA +VILIFSV + FQG A+++S+
Sbjct: 1 IKSNNHENVSLAKAKGVWSTLPVNEKKLNVAFRSARSVILIFSVRESGKFQGFARLSSES 60
Query: 327 GGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQE 384
+W G + G F + W+ EL F K+ HL NP+NE+ PVKI RD QE
Sbjct: 61 HHGGSPIHWVLPAGMSAKMLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQE 120
Query: 385 LEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
+E G QL L + +L + KR
Sbjct: 121 IELECGTQLCLLFPPDESIDLYQVIHKMRHKR 152
>gi|328784602|ref|XP_395221.4| PREDICTED: YTH domain-containing protein 1-like [Apis mellifera]
Length = 457
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 114 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFAR 173
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 174 LSTESRRDGAPISWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 233
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+EP + E+L L P+ E I + ++ +E AK +
Sbjct: 234 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAAKHI 273
>gi|380029289|ref|XP_003698309.1| PREDICTED: YTH domain-containing protein 1-like [Apis florea]
Length = 456
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 113 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFAR 172
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 173 LSTESRRDGAPISWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 232
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+EP + E+L L P+ E I + ++ +E AK +
Sbjct: 233 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAAKHI 272
>gi|171682272|ref|XP_001906079.1| hypothetical protein [Podospora anserina S mat+]
gi|170941095|emb|CAP66745.1| unnamed protein product [Podospora anserina S mat+]
Length = 185
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 82/141 (58%), Gaps = 5/141 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FIVKS N +N+E ++ +W TQ N + EAF+ NVIL FS+N++ HFQG A+
Sbjct: 13 TRFFIVKSFNEQNVEQCMEDNIWTTQAKNSSTFTEAFNQCRNVILFFSINQSGHFQGYAR 72
Query: 322 MTSKIGGSVGGGNWKYA--HGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
MT+ + W + GT+ F ++WL L F + R + NP NE LPV +
Sbjct: 73 MTTAPSSKIPRPCWMKSLPWGTSE---PFRLEWLSTTPLEFRRVRRVTNPLNEGLPVFVG 129
Query: 380 RDCQELEPSIGEQLAALLYLE 400
+D QE+E S+G +L + LE
Sbjct: 130 KDGQEIETSVGHELLNEMDLE 150
>gi|34784575|gb|AAH57067.1| Cpsf4 protein [Mus musculus]
Length = 159
Score = 105 bits (261), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C +
Sbjct: 3 PFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPF 59
Query: 123 KHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
H + + IK+C Y GFC +GP CR+RH +
Sbjct: 60 LHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
>gi|395533099|ref|XP_003768601.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Sarcophilus harrisii]
Length = 170
Score = 105 bits (261), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G ++ VC+HWLR LC K D C FLHQYD ++MP C F+ FGEC ++C++
Sbjct: 56 PFRHDDGEKT---VVCKHWLRGLCKKSDCCKFLHQYDVTKMPECYFYSKFGECSNKECLF 112
Query: 123 KHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
HT+ I++C Y GFC GP C++ HV+
Sbjct: 113 LHTDSASKIRDCPWYDQGFCKYGPLCKFHHVR 144
>gi|340719507|ref|XP_003398194.1| PREDICTED: YTH domain-containing protein 1-like [Bombus terrestris]
Length = 458
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/165 (38%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+LIFSV + F G A+
Sbjct: 114 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLIFSVKESGKFAGFAR 173
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 174 LSTESRRDGAPISWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 233
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+EP + E+L L P+ E I + ++ +E AK +
Sbjct: 234 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAAKHI 273
>gi|410931245|ref|XP_003979006.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Takifugu rubripes]
Length = 263
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++
Sbjct: 53 AMCPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE 109
Query: 120 CVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
C + H + + IK+C Y GFC +GPDCR+RH +
Sbjct: 110 CPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|350410519|ref|XP_003489065.1| PREDICTED: YTH domain-containing protein 1-like [Bombus impatiens]
Length = 457
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 93/165 (56%), Gaps = 7/165 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+L+FSV + F G A+
Sbjct: 114 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLVFSVKESGKFAGFAR 173
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 174 LSTESRRDGAPISWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 233
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+EP + E+L L P+ E I + ++ +E AK +
Sbjct: 234 RDGQEIEPRVAEELCRLF---PEDE--GIEMTPILRKSKEAAKHI 273
>gi|281353451|gb|EFB29035.1| hypothetical protein PANDA_013369 [Ailuropoda melanoleuca]
Length = 1342
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N NLE+S Q+G+W+T SNE KLN AF + V L+FSV + HFQG ++M
Sbjct: 1227 RYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRM 1286
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+S+IG +W G+A G F V+W++ L F HL NP+N+N V+ISRD
Sbjct: 1287 SSEIGRE-KSQDW----GSAGLGGVFKVEWVRKESLPFQFAHHLLNPWNDNKKVQISRDG 1341
Query: 383 Q 383
Q
Sbjct: 1342 Q 1342
>gi|195999310|ref|XP_002109523.1| hypothetical protein TRIADDRAFT_53642 [Trichoplax adhaerens]
gi|190587647|gb|EDV27689.1| hypothetical protein TRIADDRAFT_53642 [Trichoplax adhaerens]
Length = 257
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ F E LD G P + D + AA + S P H
Sbjct: 11 IKFTIEFELDDQIGTQQLPFPGM--DKSGAAVCTYFAESQCVKGSM--------CPFRHT 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN- 126
G ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C Y H N
Sbjct: 61 KGDKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECQYLHINP 117
Query: 127 -EDIKECNMYKLGFCPNGPDCRYRHVK 152
IK+C Y GFC +GP CR+RHV+
Sbjct: 118 ESKIKDCPWYDRGFCKHGPACRHRHVR 144
>gi|221055621|ref|XP_002258949.1| Rat BRAIN protein-like (Conserved protein) [Plasmodium knowlesi
strain H]
gi|193809019|emb|CAQ39722.1| Rat BRAIN protein-like (Conserved protein,putative) [Plasmodium
knowlesi strain H]
Length = 263
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 80/136 (58%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+++F++KS + +N+ +S+ +WAT NE K AF + VILIFSVN + F G A
Sbjct: 22 TKFFLIKSSSDKNISISLNFNIWATTPKNEHKFVSAFRENDYVILIFSVNGSSKFCGYAV 81
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M S G S G + Y GRNF ++W+++ ++SF + HL+N NEN P+K+ RD
Sbjct: 82 MRSMPGESQNGNVYFYYDDKIFRGRNFDIQWIRVVDVSFQEVSHLKNGLNENKPIKVGRD 141
Query: 382 CQELEPSIGEQLAALL 397
QE+E G +L +
Sbjct: 142 GQEIEQMAGIKLCEVF 157
>gi|66826447|ref|XP_646578.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|60474487|gb|EAL72424.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 372
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G+ + P H R+ VC+HWLR LC KG+ C FLH+YD +MP C FF G
Sbjct: 44 GSCTKGSDCPYKHTKAERA---VVCKHWLRGLCKKGELCEFLHEYDLQKMPECYFFSKHG 100
Query: 114 ECREQDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
EC Q+C+Y H N E ++EC Y GFC +GP CR++H+K
Sbjct: 101 ECNNQECMYLHVNPEEKVRECPWYSRGFCKHGPKCRHKHIK 141
>gi|410931249|ref|XP_003979008.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Takifugu rubripes]
Length = 249
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++
Sbjct: 53 AMCPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE 109
Query: 120 CVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
C + H + + IK+C Y GFC +GPDCR+RH +
Sbjct: 110 CPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|149034887|gb|EDL89607.1| rCG42591, isoform CRA_b [Rattus norvegicus]
Length = 158
Score = 103 bits (257), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C +
Sbjct: 24 PFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPF 80
Query: 123 KHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
H + + IK+C Y GFC +GP CR+RH +
Sbjct: 81 LHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 112
>gi|345560592|gb|EGX43717.1| hypothetical protein AOL_s00215g453 [Arthrobotrys oligospora ATCC
24927]
Length = 698
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 90/196 (45%), Gaps = 56/196 (28%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G RYFIVKS E+L+ SV G+WATQ NE LNEA+ ++ENV LIFS N++ + G
Sbjct: 472 KGKDRYFIVKSLTLEDLDTSVSNGIWATQTHNEVALNEAYLASENVFLIFSANKSGEYYG 531
Query: 319 CAKMTSKIGGSVGGG-NWK-------------------------------YAHGTAHY-- 344
A+M S+I +V W + GT +
Sbjct: 532 YARMVSEISDAVASKIEWAPMTQNIDETALPKAIYTPPTATAPRGRIIDDSSRGTIFWEV 591
Query: 345 --------------GRNFSVKW--------LKLCELSFHKTRHLRNPYNENLPVKISRDC 382
G S W + ++ F++TR LRNPYN + VKI+RD
Sbjct: 592 IEDSDSEDESAPVEGTTISKAWGKPFRVEWVSTSKVPFYRTRGLRNPYNVSREVKIARDG 651
Query: 383 QELEPSIGEQLAALLY 398
ELEP++G +L + +
Sbjct: 652 TELEPTVGRKLIQMFH 667
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 208 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 264
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 265 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 297
>gi|348511281|ref|XP_003443173.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Oreochromis niloticus]
Length = 265
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 61/93 (65%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GPDCR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|281210598|gb|EFA84764.1| CCCH-type zinc finger-containing protein [Polysphondylium pallidum
PN500]
Length = 374
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+YD ++MP C FF FGEC Q+C+Y H N E + EC
Sbjct: 64 VVCKHWLRGLCKKGELCEFLHEYDLAKMPECYFFSKFGECSNQECMYLHLNPEEKVIECP 123
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFC +GP CR++HVK
Sbjct: 124 WYARGFCKHGPKCRHKHVK 142
>gi|432870755|ref|XP_004071832.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Oryzias latipes]
Length = 265
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GPDCR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|82793695|ref|XP_728143.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23484345|gb|EAA19708.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 260
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 79/136 (58%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+++F++KS + +N+ +S+ +WAT NE K AF + VIL+FSVN + F G A
Sbjct: 5 TKFFLIKSSSDKNISISLNFNIWATTPKNENKFLTAFTENDYVILVFSVNESSKFCGYAI 64
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M SK G S + Y G+NF ++W+++ ++ FH+ HL+N N+N +K+ RD
Sbjct: 65 MRSKPGESKNSNVYFYYDDKIFRGKNFDIQWIRIVDVFFHEVTHLKNSLNDNKLIKVGRD 124
Query: 382 CQELEPSIGEQLAALL 397
QE+E G +L +
Sbjct: 125 GQEIEQMAGIKLCDIF 140
>gi|410931251|ref|XP_003979009.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 4 [Takifugu rubripes]
Length = 237
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++
Sbjct: 53 AMCPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE 109
Query: 120 CVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
C + H + + IK+C Y GFC +GPDCR+RH +
Sbjct: 110 CPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|410931247|ref|XP_003979007.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Takifugu rubripes]
Length = 248
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++
Sbjct: 53 AMCPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKE 109
Query: 120 CVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
C + H + + IK+C Y GFC +GPDCR+RH +
Sbjct: 110 CPFLHIDPESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|118375586|ref|XP_001020977.1| YT521-B-like family protein [Tetrahymena thermophila]
gi|89302744|gb|EAS00732.1| YT521-B-like family protein [Tetrahymena thermophila SB210]
Length = 1063
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 100/189 (52%), Gaps = 15/189 (7%)
Query: 220 VHQQQLVQQPQQQGTQTTQMQ---NLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLE 276
+ QQQ +Q Q + Q +++ NLP +++ L + +R+F ++SCN+EN+
Sbjct: 125 LTQQQTDKQMQMKNEQLRKIKENLNLP------SDKEYQSLLEN-ARFFFIRSCNQENIT 177
Query: 277 LSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGN-W 335
++QQ +WAT + NE L +AF +NVIL+F VN+T +FQG A+M I W
Sbjct: 178 FALQQSIWATTQKNEKALFDAFKKTQNVILVFGVNKTNYFQGVARMQQHILDKNSYKTPW 237
Query: 336 KYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPY--NENLPVKISRDCQELEPSIGEQL 393
K G +F ++WL++ +L L+N NE L K +DCQE++ G++L
Sbjct: 238 KNTEAIK-LGEDFLIRWLRVEDLPHQNCSDLKNALCNNEQLISK-PKDCQEIDSENGKKL 295
Query: 394 AALLYLEPD 402
L D
Sbjct: 296 CLRFSLNTD 304
>gi|397478491|ref|XP_003810578.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan paniscus]
Length = 147
Score = 102 bits (255), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 24 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSF 80
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 81 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 111
>gi|383866424|ref|XP_003708670.1| PREDICTED: YTH domain-containing protein 1-like, partial [Megachile
rotundata]
Length = 351
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/165 (37%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS N EN+ LS +GVW+T NEA LN+A+ + NV+L+FSV + F G A+
Sbjct: 114 ARFFIIKSNNAENVTLSKAKGVWSTLPQNEANLNQAYRESRNVLLVFSVKESGKFAGFAR 173
Query: 322 MTSKIGGSVGGGNWKYAHGTA--HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
+ ++ +W G + G F V W+ EL F T HL NP+N+ VKI
Sbjct: 174 LGTESRRDGAPISWVLPPGLSAKALGGVFKVDWICRKELPFTATLHLYNPWNDGKQVKIG 233
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+EP + E+L L P+ E I + ++ +E AK +
Sbjct: 234 RDGQEIEPKVAEELCRLF---PEDE--GIEMTPILRKSKEAAKHI 273
>gi|334347749|ref|XP_003341979.1| PREDICTED: YTH domain-containing protein 1-like, partial
[Monodelphis domestica]
Length = 654
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N EN+ L+ +G+W+T +NE KLN AF SA NVILIFSV +R F G A+
Sbjct: 303 ARFFLIKSNNYENISLAKARGIWSTLPTNERKLNAAFRSARNVILIFSVRESRKFDGFAR 362
Query: 322 MTSKI--GGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
++S+ GGS + G F + W+ EL F K+ HL N NE PVKI
Sbjct: 363 LSSESHHGGSPIHWVLPESMNPKMLGGVFKIDWICRHELPFTKSAHLTNSLNEYKPVKIG 422
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
D QE++ G QL L + +L + KR
Sbjct: 423 CDGQEIDFECGTQLCLLFCPDESVDLYQVIHKMHHKR 459
>gi|9711035|dbj|BAB07796.1| no arches [Danio rerio]
Length = 190
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + + AA AA G P H
Sbjct: 11 IKFDLEIAVEQQLGAQPLPFPGMDK----SGAAVCEYFMRAACMKGGMCP------FRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYTKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GPDCR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|193788659|ref|NP_001123357.1| putative cleavage and polyadenylation specificity factor subunit
4-like protein [Homo sapiens]
gi|332848949|ref|XP_001149545.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pan troglodytes]
gi|206729925|sp|A6NMK7.3|CPS4L_HUMAN RecName: Full=Putative cleavage and polyadenylation specificity
factor subunit 4-like protein
gi|187957320|gb|AAI57871.1| CPSF4L protein [Homo sapiens]
Length = 179
Score = 102 bits (254), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|321457928|gb|EFX69004.1| hypothetical protein DAPPUDRAFT_301188 [Daphnia pulex]
Length = 280
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 91/170 (53%), Gaps = 8/170 (4%)
Query: 267 VKSCNRENLELSVQQG-VWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSK 325
+KS N EN+ L+ +G VW+T NEAKLN+AF NV+L+FSV + F G A+++ +
Sbjct: 1 MKSNNPENISLAKSKGCVWSTPPQNEAKLNQAFRQCRNVLLVFSVKESGKFCGFARLSIE 60
Query: 326 IGGSVGGGNWKYAHGTAH--YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQ 383
W G + G F + W+ +LSF + HL NP+NE PVKI RD Q
Sbjct: 61 SRRDASPVQWILPPGLSSRALGGVFRIDWISKKDLSFTRVMHLYNPWNEGKPVKIGRDGQ 120
Query: 384 ELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNP 433
E+E +GE+L L + D E + +R ++ A+ V NGG P
Sbjct: 121 EVENHVGEELCRLFAEDSDVEWSTV-----LRRSKDSARRVQVANGGVRP 165
>gi|290997884|ref|XP_002681511.1| predicted protein [Naegleria gruberi]
gi|284095135|gb|EFC48767.1| predicted protein [Naegleria gruberi]
Length = 105
Score = 102 bits (254), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKE 131
++ VC+HWLR LC KGD C FLHQY +MP C FF +GEC +C++ H + IK
Sbjct: 2 KEVVCKHWLRGLCKKGDGCEFLHQYKAGKMPECHFFSEYGECSNVECIFLHIKPEDRIKT 61
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y+ GFC +GPDCR +H++
Sbjct: 62 CPWYERGFCKHGPDCRLKHLR 82
>gi|18859059|ref|NP_571084.1| cleavage and polyadenylation specificity factor subunit 4 [Danio
rerio]
gi|1575709|gb|AAC60040.1| no arches [Danio rerio]
gi|28277462|gb|AAH45289.1| No arches [Danio rerio]
gi|182888966|gb|AAI64456.1| Nar protein [Danio rerio]
Length = 271
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + + AA AA G P H
Sbjct: 11 IKFDLEIAVEQQLGAQPLPFPGMDK----SGAAVCEYFMRAACMKGGMCP------FRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GPDCR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|432870757|ref|XP_004071833.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Oryzias latipes]
Length = 240
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + +A G P H
Sbjct: 11 IKFDLEIAVEQQLGAQPLPFPGMDKSGSAVCEFFM----------KGTCMKGGMCPFRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GPDCR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPDCRHRHTR 144
>gi|426346925|ref|XP_004041119.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Gorilla gorilla gorilla]
Length = 179
Score = 102 bits (254), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|410981626|ref|XP_003997168.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Felis catus]
Length = 166
Score = 102 bits (253), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P+ H+ G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PLRHNRGEK---MVVCKHWLRGLCKKGDQCNFLHQYDVTRMPECYFYSKFGDCNNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
H K +C Y GFC +GP C++RHV+
Sbjct: 113 LHVKPAFKTRDCPWYDQGFCKDGPLCKHRHVR 144
>gi|297273512|ref|XP_001086803.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Macaca mulatta]
Length = 162
Score = 102 bits (253), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 58 DHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE 117
D P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C
Sbjct: 34 DRKLCPFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSN 90
Query: 118 QDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
++C + H K +C Y GFC +GP C+YRHV
Sbjct: 91 KECPFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 126
>gi|334349684|ref|XP_001369617.2| PREDICTED: YTH domain-containing protein 1-like, partial
[Monodelphis domestica]
Length = 471
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+ ++KS NREN+ L+ +G+W+T +NE KLN AF SA NVILIFSV + FQG A+
Sbjct: 227 ARFSLIKSSNRENISLAKARGIWSTLPANEKKLNAAFRSARNVILIFSVTESGAFQGFAR 286
Query: 322 MTSKIGGSVGGG---NWKYAHG--TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
+ S+ S GG +W G G F + W+ EL F K HL N N + PV
Sbjct: 287 LCSE---SHHGGPPIHWVLPEGMNLKTLGGVFRIAWICRHELPFTKCVHLTNALNGHKPV 343
Query: 377 KISRDCQELEPSIGEQLAALL 397
KI RD QE++ +L L
Sbjct: 344 KIGRDGQEVDLECATELCLLF 364
>gi|402465457|gb|EJW01267.1| hypothetical protein EDEG_00528 [Edhazardia aedis USNM 41457]
Length = 176
Score = 102 bits (253), Expect = 9e-19, Method: Composition-based stats.
Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED-IKEC 132
+ VC+HWLR LC KG C FLH+YD RMP C FF +GEC +C + H + + KEC
Sbjct: 49 KAVVCKHWLRGLCKKGRECEFLHEYDLKRMPECWFFSKYGECANNECYFLHVDPNKAKEC 108
Query: 133 NMYKLGFCPNGPDCRYRHVK 152
YK GFC NG CR +HVK
Sbjct: 109 AWYKRGFCRNGNYCRNKHVK 128
>gi|242021708|ref|XP_002431285.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
gi|212516553|gb|EEB18547.1| Cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Pediculus humanus corporis]
Length = 233
Score = 102 bits (253), Expect = 9e-19, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G A+ P H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F
Sbjct: 47 GTCNKGAACPFRHIRGDRTI---VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFN 103
Query: 114 ECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
C ++C + H + + IK+C Y GFC +GP CR+RHV+
Sbjct: 104 ACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVR 144
>gi|332261216|ref|XP_003279670.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Nomascus leucogenys]
Length = 179
Score = 102 bits (253), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|355568881|gb|EHH25162.1| hypothetical protein EGK_08934 [Macaca mulatta]
gi|355754343|gb|EHH58308.1| hypothetical protein EGM_08126 [Macaca fascicularis]
Length = 179
Score = 101 bits (252), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|347968471|ref|XP_003436228.1| AGAP013044-PA [Anopheles gambiae str. PEST]
gi|333467988|gb|EGK96785.1| AGAP013044-PA [Anopheles gambiae str. PEST]
Length = 296
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 12/146 (8%)
Query: 9 SFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHS 68
+F E L+ G P + D + AA NA+ G S P H
Sbjct: 12 TFKIEKDLNEQYGALALPFPGM--DKSTAAVCLFFNASDGTECKKGN-----SCPFRHIR 64
Query: 69 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED 128
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H + +
Sbjct: 65 GDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPE 121
Query: 129 --IKECNMYKLGFCPNGPDCRYRHVK 152
IK+C Y GFC +GP+CR+RHV+
Sbjct: 122 SKIKDCPWYDRGFCRHGPNCRHRHVR 147
>gi|452837644|gb|EME39586.1| hypothetical protein DOTSEDRAFT_75293 [Dothistroma septosporum
NZE10]
Length = 587
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 55/191 (28%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+YFIVKS ++LE SV+ G+WATQ NE LN+A+ A++V LIFS N++ + G A+M
Sbjct: 376 KYFIVKSLTAQDLEASVRNGIWATQSHNEEALNQAYGQADSVFLIFSANKSGEYFGYARM 435
Query: 323 TSKIGGSVGGGNWKY--------------------AHGTAHYGRNF------SVKW---- 352
TS I G + + A TA GR ++ W
Sbjct: 436 TSAITGELVDLTKTFPSAEEVAADPAGSPQSIATPATATAPKGRIIDDSARGTIFWEADR 495
Query: 353 -------------------------LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEP 387
L L F++TR LRNP+N N VKI+RD ELEP
Sbjct: 496 SAEDNASQGQEGGGQNWGKQFQIEWLSTNRLPFYRTRGLRNPWNANREVKIARDGTELEP 555
Query: 388 SIGEQLAALLY 398
S+G +L + +
Sbjct: 556 SVGRRLVQMFH 566
>gi|297701675|ref|XP_002827828.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Pongo abelii]
Length = 179
Score = 101 bits (251), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|258567270|ref|XP_002584379.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905825|gb|EEP80226.1| predicted protein [Uncinocarpus reesii 1704]
Length = 480
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 4/142 (2%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
P +R+F++KS E + S +G W TQR N KL +AF+S +VIL FSVN+++ FQ
Sbjct: 333 PNNEARFFMIKSHTLETVTASQTEGAWVTQRKNVEKLTDAFNSCRHVILFFSVNQSKAFQ 392
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLP 375
G A M S + G G K A T + + F V+WL F HL N YNEN
Sbjct: 393 GYALMES-LPGDPGVSVPKLAE-TYEWEASPPFKVRWLNTAVTYFKNVSHLTNAYNENAV 450
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V + RD QE+EP G +L +L
Sbjct: 451 VLVGRDGQEIEPHCGLELCQVL 472
>gi|367029769|ref|XP_003664168.1| hypothetical protein MYCTH_2306674 [Myceliophthora thermophila ATCC
42464]
gi|347011438|gb|AEO58923.1| hypothetical protein MYCTH_2306674 [Myceliophthora thermophila ATCC
42464]
Length = 384
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/160 (38%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 259 QGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQG 318
+G +R+FI+KS N EN+ ++ +W TQ N L++AF +NVIL FSVN+++ FQG
Sbjct: 204 KGDTRFFILKSFNEENVRRCMEDCLWTTQIPNAEVLSKAFAECKNVILFFSVNKSKAFQG 263
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPV 376
A+M S S +A G H+ + F V+WL + F + H++NPYN+ LPV
Sbjct: 264 YARMMS--APSPDNPRPSFAKGI-HWETSDPFRVRWLSKTAVDFWRIGHIKNPYNDYLPV 320
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
+ +D QE+E G AALL E+ + AAE+ R
Sbjct: 321 LVGKDGQEIEEECG---AALL-----REMEGYAAAAESSR 352
>gi|388856586|emb|CCF49892.1| related to cleavage and polyadenylation specificity factor
[Ustilago hordei]
Length = 405
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 12/149 (8%)
Query: 10 FDFEGGLDAGPGMPTASNPAIQSD---STAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
F FE + A + ++ + D A A+ H PS P ++A
Sbjct: 45 FTFEAHIKANLNVKLDNDAQLCPDYAERLQCARGASCPRRHVKPSHLNFLPAGSTAL--- 101
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHT 125
R + ++TVC+HWLR LC KGD C +LH+YD R+P CRF+ FG C DC+Y H
Sbjct: 102 ---RDANKRTVCKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHV 158
Query: 126 NEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+ IK EC Y GFCP GP+C +H++
Sbjct: 159 HPAIKRRECEKYNRGFCPKGPNCPKKHIR 187
>gi|402900921|ref|XP_003913409.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Papio anubis]
Length = 179
Score = 101 bits (251), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDITRMPECYFYSKFGDCSNKECPF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
H K +C Y GFC +GP C+YRHV
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDGPLCKYRHV 143
>gi|301781634|ref|XP_002926233.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Ailuropoda melanoleuca]
Length = 166
Score = 100 bits (250), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H+ G + VC+HWLR LC KGD C FLHQYD +RMP C F FG+C ++C +
Sbjct: 56 PFRHNQGEK---MVVCKHWLRGLCKKGDQCSFLHQYDVTRMPECYFHSKFGDCNNKECSF 112
Query: 123 KHTNE--DIKECNMYKLGFCPNGPDCRYRHV 151
H + ++C Y GFC +GP C++RHV
Sbjct: 113 LHVKPAFNTRDCPWYDQGFCKDGPLCKHRHV 143
>gi|148702475|gb|EDL34422.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_d [Mus
musculus]
Length = 227
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 1 MEDSEGGLS-FDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDH 59
ME+ GL F F LD T P D +++A + G
Sbjct: 1 MEEVIAGLQGFTFAFELDVESQKGTGLLPFQGMDKSSSAVCNFF--------AKGLCVKG 52
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++
Sbjct: 53 MLCPLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKE 109
Query: 120 CVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
C++ H +K +C Y GFC GP C+YRHV
Sbjct: 110 CLFLHLKPVLKLQDCPWYNQGFCKEGPLCKYRHV 143
>gi|124504857|ref|XP_001351171.1| YT521-B-like family protein, putative [Plasmodium falciparum 3D7]
gi|4493918|emb|CAB11120.2| YT521-B-like family protein, putative [Plasmodium falciparum 3D7]
Length = 280
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 77/132 (58%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+++F++KS + +N+ +S+ +WAT NE K AF + VIL+FSVN + F G A
Sbjct: 24 TKFFLIKSSSDKNIAISLNYNIWATTPKNEYKFVSAFMEHDYVILVFSVNGSSKFCGYAI 83
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
M SK G S + Y G+NF ++W+++ ++ F + HL+N NE P+K+ RD
Sbjct: 84 MQSKPGESKNNNVYFYYDNKVFRGKNFDIQWIRVVDVPFQEVAHLKNSLNEYKPIKVGRD 143
Query: 382 CQELEPSIGEQL 393
QE+E G QL
Sbjct: 144 GQEIEQMAGIQL 155
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|318187062|ref|NP_001187768.1| cleavage and polyadenylation specificity factor subunit 4
[Ictalurus punctatus]
gi|308323923|gb|ADO29097.1| cleavage and polyadenylation specificity factor subunit 4
[Ictalurus punctatus]
Length = 271
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/81 (50%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKE 131
+ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H + + IK+
Sbjct: 64 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESKIKD 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFC +GPDCR+RH +
Sbjct: 124 CPWYDRGFCKHGPDCRHRHTR 144
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|320039561|gb|EFW21495.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 647
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G +++FI+KS + EN+ S +G W+TQ N KL +A++SA +V+L FSVN ++ F
Sbjct: 501 LGAGETKFFILKSLSLENVIASQHEGTWSTQVKNIDKLVDAYNSARHVVLFFSVNHSKAF 560
Query: 317 QGCAKMTSKIGG-SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A M S G V W ++ F V+W+ SF + HL N YN+N+
Sbjct: 561 QGFACMESLPGDPDVPIPRWADSY-NWEPSPPFRVRWINTAVTSFKQVAHLTNAYNDNML 619
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V + RD QE+EP G +L ++L
Sbjct: 620 VFVGRDGQEIEPRCGLELCSIL 641
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|328770159|gb|EGF80201.1| hypothetical protein BATDEDRAFT_5960, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 147
Score = 100 bits (248), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
GA +S P H + R VC+HWLR LC KG+ C FLH+Y+ RMP C FF G
Sbjct: 30 GACRQGSSCPFQH---PQKMRAVVCKHWLRGLCKKGEVCEFLHEYNMKRMPECWFFAKLG 86
Query: 114 ECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
EC +C Y H + D I+EC Y GFC +G +CR++H +
Sbjct: 87 ECTNPECQYLHIDPDSKIRECPWYARGFCKHGAECRHKHTR 127
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
++FD E ++ G P + + AA AA G P H
Sbjct: 11 ITFDLELAVEQQLGAQPLPFPGMDK----SGAAVCEFFLKAACGKGGMCP------FRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|260824375|ref|XP_002607143.1| hypothetical protein BRAFLDRAFT_118661 [Branchiostoma floridae]
gi|229292489|gb|EEN63153.1| hypothetical protein BRAFLDRAFT_118661 [Branchiostoma floridae]
Length = 300
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 78/151 (51%), Gaps = 15/151 (9%)
Query: 4 SEGGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAP 63
S GG+ F+ E ++ G P + D + AA G+ AS P
Sbjct: 7 SVGGIRFEMEIAIEEQRGSQPLPFPGM--DKSGAAICDYF--------VRGSCVKGASCP 56
Query: 64 VPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYK 123
H G +S VC+HWLR LC KGD C FLH+YD ++MP C F+ FG C ++C +
Sbjct: 57 FRHVRGEKS---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGACSNKECPFL 113
Query: 124 HTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
H + + IK+C Y GFC +GP C+ RHV+
Sbjct: 114 HIDPESKIKDCAWYDRGFCKHGPHCKNRHVR 144
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|241628392|ref|XP_002409971.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215503270|gb|EEC12764.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 1337
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 3/141 (2%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+++VK+ ++ +++SV G+W+ + + K+ A + V+L+FSV + HFQG A++
Sbjct: 1193 RFYVVKASSQRTVDVSVSTGLWSLGPATDRKVQWALKEGKEVVLVFSVQGSGHFQGYAQL 1252
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+ S+ YA T GR + ++W C L F TRHL NP+NEN V++SRD
Sbjct: 1253 QG-LASSMCCPPNDYAANTG--GRCYFIEWKHRCNLPFQSTRHLLNPWNENRKVQVSRDG 1309
Query: 383 QELEPSIGEQLAALLYLEPDS 403
QE+EP IGE L L PD+
Sbjct: 1310 QEIEPRIGEALCRLWIGLPDA 1330
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
L FD E ++ G P + + AA S+ G P H
Sbjct: 11 LRFDLELAVEQQLGAQPLPFPGMDK-------SGAAVCEFFLKSACGKG---GMCPFRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|392863009|gb|EAS36297.2| hypothetical protein CIMG_01519 [Coccidioides immitis RS]
Length = 649
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 82/142 (57%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G +++FI+KS + EN+ S +G W+TQ N KL +A++SA +V+L FSVN ++ F
Sbjct: 503 LGAGETKFFILKSLSLENVIASQHEGTWSTQVKNIDKLVDAYNSARHVVLFFSVNHSKAF 562
Query: 317 QGCAKMTSKIGG-SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A M S G V W ++ F V+W+ SF + HL N YN+N+
Sbjct: 563 QGFACMESLPGDPDVPIPRWADSY-NWEPSPPFRVRWVNTAVTSFKQVAHLTNAYNDNML 621
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V + RD QE+EP G +L ++L
Sbjct: 622 VFVGRDGQEIEPRCGLELCSIL 643
>gi|67601164|ref|XP_666378.1| zf-CCCH zinc finger protein [Cryptosporidium hominis TU502]
gi|54657362|gb|EAL36147.1| zf-CCCH zinc finger protein [Cryptosporidium hominis]
Length = 178
Score = 99.8 bits (247), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/89 (48%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCV 121
P+ GR S VCRHW+R++CMKGD C FLHQYD RMP C ++ +G C ++ +C
Sbjct: 32 PNVRGRHS---VVCRHWIRNMCMKGDFCDFLHQYDYERMPPCFIYQKYGVCVDEALGNCP 88
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRH 150
+KH +D C Y LGFC GP C+ RH
Sbjct: 89 FKHKADDTPLCAQYFLGFCKYGPKCKRRH 117
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + + AA AA G P H
Sbjct: 11 IKFDLEIAVEQQLGAQPLPFPGMDK----SGAAVCEFFLKAACGKGGMCPFR------HI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|170046237|ref|XP_001850680.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
gi|167869066|gb|EDS32449.1| cleavage and polyadenylation specificity factor subunit 4 [Culex
quinquefasciatus]
Length = 291
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 33 DSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDAC 92
D + AA N GA P H G R+ VC+HWLR+LC KGD C
Sbjct: 34 DKSTAAVCLFFNGTDGTECEKGAG-----CPFRHIRGDRT---IVCKHWLRALCKKGDQC 85
Query: 93 GFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
FLH+YD ++MP C F+ F C ++C + H + + IK+C Y GFC +GP+CR+RH
Sbjct: 86 EFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPNCRHRH 145
Query: 151 VK 152
V+
Sbjct: 146 VR 147
>gi|302832706|ref|XP_002947917.1| hypothetical protein VOLCADRAFT_36176 [Volvox carteri f.
nagariensis]
gi|300266719|gb|EFJ50905.1| hypothetical protein VOLCADRAFT_36176 [Volvox carteri f.
nagariensis]
Length = 131
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI++S +N+ +SV+ G WAT R N+ KL+EAF + V L++SV + FQG A M
Sbjct: 4 RYFIIRSSTMQNIFISVRVGAWATTRQNDDKLDEAFRKSREVRLLYSVTGSNAFQGYAVM 63
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+ IG W+ +G F V W L EL +T H+RNPYNEN PV I+RD
Sbjct: 64 RTPIGRFGRPVVWE---NGKQFGNPFGVDWRVLFELPHSETEHIRNPYNENKPVHIARDG 120
Query: 383 QEL 385
EL
Sbjct: 121 TEL 123
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 79 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 135
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 136 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 168
>gi|343426681|emb|CBQ70210.1| related to Cleavage and polyadenylation specificity factor
[Sporisorium reilianum SRZ2]
Length = 377
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIK-- 130
++TVC+HWLR LC KGD C +LH+YD R+P CRF+ FG C DC+Y H + IK
Sbjct: 106 KRTVCKHWLRGLCKKGDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDPAIKRR 165
Query: 131 ECNMYKLGFCPNGPDCRYRHVK 152
EC Y GFCP GP C +H++
Sbjct: 166 ECEKYNRGFCPKGPLCTKKHIR 187
>gi|119597072|gb|EAW76666.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_e [Homo sapiens]
Length = 229
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 115 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 171
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 172 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 204
>gi|345305259|ref|XP_001512096.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 243
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 30 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 86
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 87 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 119
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + + AA AA G P H
Sbjct: 11 IKFDLELAVEQQLGAQPLPFPGMDK----SGAAVCEFFLKAACGKGGMCP------FRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|303311385|ref|XP_003065704.1| YT521-B-like family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105366|gb|EER23559.1| YT521-B-like family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 650
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 80/137 (58%), Gaps = 2/137 (1%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+++FI+KS + EN+ S +G W+TQ N KL +A++SA +V+L FSVN ++ FQG A
Sbjct: 509 TKFFILKSLSLENVIASQHEGTWSTQVKNIDKLVDAYNSARHVVLFFSVNHSKAFQGFAC 568
Query: 322 MTSKIGG-SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
M S G V W ++ F V+W+ SF + HL N YN+N+ V + R
Sbjct: 569 MESLPGDPDVPIPRWADSY-NWEPSPPFRVRWINTAVTSFKQVAHLTNAYNDNMLVFVGR 627
Query: 381 DCQELEPSIGEQLAALL 397
D QE+EP G +L ++L
Sbjct: 628 DGQEIEPRCGLELCSIL 644
>gi|225559870|gb|EEH08152.1| predicted protein [Ajellomyces capsulatus G186AR]
Length = 805
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K E ++ + ++G WATQ N K AFD++ +V+L+FSVN++ F
Sbjct: 654 LAAGDVTYFLIKCVAYEMVDAAKKEGTWATQVKNLEKFTNAFDNSRHVVLVFSVNQSGAF 713
Query: 317 QGCAKMTSKIGGS-VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M S G V +W + G FS+ W E F H++NPYN+N
Sbjct: 714 QGYARMDSHPGAEGVERPSW-FKSLDMPLGPPFSITWYNTIETRFKYVGHIKNPYNDNHD 772
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L +L
Sbjct: 773 VTYARDGQELEEECGRTLCGIL 794
>gi|325089882|gb|EGC43192.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 805
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K E ++ + ++G WATQ N K AFD++ +V+L+FSVN++ F
Sbjct: 654 LAAGDVTYFLIKCVAYEMVDAAKKEGTWATQVKNLEKFTNAFDNSRHVVLVFSVNQSGAF 713
Query: 317 QGCAKMTSKIGGS-VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M S G V +W + G FS+ W E F H++NPYN+N
Sbjct: 714 QGYARMDSHPGAEGVERPSW-FKSLDMPLGPPFSITWYNTIETRFKYVGHIKNPYNDNHD 772
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L +L
Sbjct: 773 VTYARDGQELEEECGRTLCGIL 794
>gi|240276256|gb|EER39768.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 805
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K E ++ + ++G WATQ N K AFD++ +V+L+FSVN++ F
Sbjct: 654 LAAGDVTYFLIKCVAYEMVDAAKKEGTWATQVKNLEKFTNAFDNSRHVVLVFSVNQSGAF 713
Query: 317 QGCAKMTSKIGGS-VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M S G V +W + G FS+ W E F H++NPYN+N
Sbjct: 714 QGYARMDSHPGAEGVERPSW-FKSLDMPLGPPFSITWYNTIETRFKYVGHIKNPYNDNHD 772
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L +L
Sbjct: 773 VTYARDGQELEEECGRTLCGIL 794
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|443697259|gb|ELT97794.1| hypothetical protein CAPTEDRAFT_180092 [Capitella teleta]
Length = 274
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 76/146 (52%), Gaps = 15/146 (10%)
Query: 9 SFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHS 68
FD E L+ G P + + +A + A S G A P H
Sbjct: 12 KFDIEIALERQVGATPLPFPGMDK-----SGSAICTFHMQAMCSRGIA-----CPFRHIK 61
Query: 69 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN-- 126
G R+ VC+HWLR LC KGD C FLH+YD S+MP C FF FG+C ++C + H +
Sbjct: 62 GDRT---VVCKHWLRGLCKKGDDCEFLHEYDMSKMPECYFFSKFGQCGNKECPFLHIDPE 118
Query: 127 EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ +K+C Y GFC +GP+C+ RHV+
Sbjct: 119 QKMKDCAWYDRGFCRHGPNCKNRHVR 144
>gi|119597068|gb|EAW76662.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_a [Homo sapiens]
Length = 216
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 2 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 58
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 59 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|156102136|ref|XP_001616761.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148805635|gb|EDL47034.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 607
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 230 QQQGTQTTQMQNLPN--GLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQ 287
+Q G M+N N +PN + N +P + FI+K +L LS+ GVWAT
Sbjct: 372 KQGGGTNADMRNQENLMSIPNIYDANNEVVPSEKIKIFIIKCNQICHLYLSILYGVWATG 431
Query: 288 RSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRN 347
++N K F ++ +FSVN + FQG AKM + ++ W T G N
Sbjct: 432 KNNTRKFTSLFKENYTIVFLFSVNESGGFQGYAKMVTVPIKNLYENLW--GPITKRLGGN 489
Query: 348 FSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMA 407
F ++W+K+ ++ F +++ NP+N+NLP+K SRD EL ++ + +Y P + +A
Sbjct: 490 FRIQWVKIAKIDFDAFKNMTNPFNDNLPLKKSRDGTELPFNLASIICHRIYALPSEDFLA 549
Query: 408 ISVAAEAKREEEKA 421
++ +R A
Sbjct: 550 GTIYEYKRRINHAA 563
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 26/101 (25%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCVYKHTNEDIKE- 131
+C H+++++CMK C +LHQ +++P C+ F C ++ C+++HT E++
Sbjct: 98 IICIHYIKNMCMKNLFCNYLHQLIYAKIPACKNFLKNNYCADRVRGSCLFRHTLENVNSG 157
Query: 132 ----------------------CNMYKLGFCPNGPDCRYRH 150
C Y LGFC G +C+ H
Sbjct: 158 GFAEGKDEHLDDVLKLLHEKNICVNYLLGFCNLGYNCKRVH 198
>gi|291406461|ref|XP_002719268.1| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Oryctolagus cuniculus]
Length = 184
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 5/101 (4%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G P H G ++ VC+HWLR LC KGD C FLH+YD +RMP C F+ FG
Sbjct: 47 GPCAKETLCPFRHEHGEKT---VVCKHWLRGLCKKGDHCRFLHRYDATRMPECYFYSTFG 103
Query: 114 ECREQDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+C ++C + H +K +C Y+ GFC NGP C+YRH +
Sbjct: 104 DCNNKECSFLHVKSAVKPRDCPWYEQGFCKNGPLCKYRHTR 144
>gi|261199794|ref|XP_002626298.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239594506|gb|EEQ77087.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 816
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K + + + +G WATQ N K EAFD++ +V+L+FSVN++ F
Sbjct: 665 LVVGDVSYFLIKCVAYDMVNTAKIEGTWATQLKNVEKFAEAFDNSRHVVLVFSVNQSGAF 724
Query: 317 QGCAKMTSKIGG-SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M ++ G V +W G G F + W E F HL+NPYNEN
Sbjct: 725 QGYARMDTRPGDPGVTTPSWFKRPGLP-LGPPFRITWYNTVETMFKYVGHLKNPYNENHD 783
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L LL
Sbjct: 784 VTYARDGQELEADCGRVLCGLL 805
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|239607896|gb|EEQ84883.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
gi|327350477|gb|EGE79334.1| hypothetical protein BDDG_02273 [Ajellomyces dermatitidis ATCC
18188]
Length = 816
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K + + + +G WATQ N K EAFD++ +V+L+FSVN++ F
Sbjct: 665 LVVGDVSYFLIKCVAYDMVNTAKIEGTWATQLKNVEKFAEAFDNSRHVVLVFSVNQSGAF 724
Query: 317 QGCAKMTSKIGG-SVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M ++ G V +W G G F + W E F HL+NPYNEN
Sbjct: 725 QGYARMDTRPGDPGVTTPSWFKRPGLP-LGPPFRITWYNTVETMFKYVGHLKNPYNENHD 783
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L LL
Sbjct: 784 VTYARDGQELEADCGRVLCGLL 805
>gi|444724275|gb|ELW64885.1| Cleavage and polyadenylation specificity factor subunit 4 [Tupaia
chinensis]
Length = 223
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 24 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 80
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 81 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 113
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|256077604|ref|XP_002575092.1| hypothetical protein [Schistosoma mansoni]
gi|360045196|emb|CCD82744.1| hypothetical protein Smp_037380 [Schistosoma mansoni]
Length = 307
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 53 SGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLF 112
+ P + P+ H R+ VC+HWLR LC KGD C FLH+YD ++MP C FF F
Sbjct: 46 TNQCPLNNLCPLRHIKADRT---VVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKF 102
Query: 113 GECREQDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
GEC ++C + H + +++C Y GFC NGP CR RHV+
Sbjct: 103 GECMNKECPFLHIDPASKVQDCPWYDRGFCRNGPLCRNRHVR 144
>gi|194216707|ref|XP_001493296.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Equus caballus]
Length = 198
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 6 GGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVP 65
G +F FE ++ G + S+A A G P
Sbjct: 9 GRFTFTFEKDVEMQKGTGLLPFQGMDKSSSAVCNFFA----------KGLCEKGKLCPFR 58
Query: 66 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 125
H G + VC+HWLR LC KGD C FLHQYD +RMP C FF FG+C ++C + H
Sbjct: 59 HDRGDK---MVVCKHWLRGLCKKGDQCKFLHQYDATRMPECYFFSKFGDCNNKECPFLHV 115
Query: 126 NEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
K +C Y GFC +GP C+YRHV+
Sbjct: 116 KPAFKTRDCPWYDQGFCKDGPLCKYRHVR 144
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 75/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E ++ G P + + AA AA G P H
Sbjct: 11 IKFDLEIAVEQQLGAQPLPFPGMDK----SGAAVCEFFLKAACGKGGMCP------FRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 61 SGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RH +
Sbjct: 118 ESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ +GEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ +GEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 144
>gi|340521051|gb|EGR51286.1| predicted protein [Trichoderma reesei QM6a]
Length = 467
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 1/143 (0%)
Query: 255 TPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTR 314
+ +P+ SRYF+VKS N N+E+S + G+W T+ N + AF +NV L+FS+N+++
Sbjct: 252 SSVPKQESRYFLVKSFNESNVEMSQRDGLWITKAKNGSLFASAFKQHQNVYLLFSINKSK 311
Query: 315 HFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
FQG A+MTS ++ W + T F ++WL F K L+NP N+
Sbjct: 312 AFQGYARMTSAPDANISPAKW-MNNITWEASDPFRIEWLNTRRTEFWKLGDLKNPLNDGK 370
Query: 375 PVKISRDCQELEPSIGEQLAALL 397
PV + RD QE + G + +L
Sbjct: 371 PVFVGRDGQEYPEACGRTMIRIL 393
>gi|149054708|gb|EDM06525.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 225
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 1 MEDSEGGL---SFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAP 57
ME+ GL +F FE ++ G + S+A A G
Sbjct: 1 MEEVIAGLQGFTFTFEQDVELQRGTGLLPFQGMDKSSSAVCNFFA----------KGLCV 50
Query: 58 DHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE 117
P+ H G + VC+HWLR LC K D C FLHQYD SRMPVC F FG C
Sbjct: 51 KGMLCPLRHEQGEK---MVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYFHSKFGNCNN 107
Query: 118 QDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHV 151
++C + H +++C Y GFC GP C+YRHV
Sbjct: 108 KECPFLHLKPVPKLQDCPWYDQGFCKEGPLCKYRHV 143
>gi|312377105|gb|EFR24020.1| hypothetical protein AND_11711 [Anopheles darlingi]
Length = 251
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 72/135 (53%), Gaps = 17/135 (12%)
Query: 20 PGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCR 79
PG+P S + AA NA+ G S P H G R+ VC+
Sbjct: 52 PGVPLISE-------STAAVCQFFNASDGMECKKGN-----SCPFRHIRGDRT---IVCK 96
Query: 80 HWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKECNMYKL 137
HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H + + IK+C Y
Sbjct: 97 HWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPESKIKDCPWYDR 156
Query: 138 GFCPNGPDCRYRHVK 152
GFC +GP+CR+RHV+
Sbjct: 157 GFCRHGPNCRHRHVR 171
>gi|395738149|ref|XP_003780757.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 4 [Pongo abelii]
Length = 171
Score = 98.2 bits (243), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H SG ++ VC HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C +
Sbjct: 3 PFRHISGEKT---VVCXHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPF 59
Query: 123 KHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
H + + IK+C Y GFC +GP CR+RH +
Sbjct: 60 LHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
>gi|452824309|gb|EME31313.1| CCCH-type zinc finger-containing protein [Galdieria sulphuraria]
Length = 224
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 2/92 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
R+ R VC+HWLR LC K + C +LH+YD S+MP C FF FGEC +C+Y+H + + +
Sbjct: 64 RNDRLIVCKHWLRGLCKKAEYCEYLHEYDMSKMPECYFFSKFGECSNTECLYRHVDPESR 123
Query: 131 --ECNMYKLGFCPNGPDCRYRHVKLPGPPPSV 160
EC Y GFC +G CRYRH+K P +
Sbjct: 124 RNECPYYARGFCRHGAKCRYRHIKKVACPAYL 155
>gi|344243104|gb|EGV99207.1| Cleavage and polyadenylation specificity factor subunit 4
[Cricetulus griseus]
Length = 107
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC-- 120
P H SG ++ VC+HWLR+LC KGD C FLH+YD ++MP F+ FG+C ++C
Sbjct: 3 PFRHISGEKT---VVCKHWLRALCKKGDQCEFLHEYDMTKMPEYYFYSKFGKCNNKECPF 59
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
+Y IK+C Y GFC +GP CR+RH +
Sbjct: 60 LYIDPESKIKDCPWYDHGFCKHGPLCRHRHTR 91
>gi|387593218|gb|EIJ88242.1| zinc finger protein [Nematocida parisii ERTm3]
gi|387596070|gb|EIJ93692.1| zinc finger protein [Nematocida parisii ERTm1]
Length = 159
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NE 127
+R VC+HWLR LC KGD C FLH Y +MP C FF +GEC QDC++ H N
Sbjct: 24 KRQDNAIVCKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNS 83
Query: 128 DIKECNMYKLGFCPNGPDCRYRHVK 152
KEC Y GFC +G CR +H K
Sbjct: 84 KSKECIWYNRGFCRHGNSCRNKHYK 108
>gi|62857541|ref|NP_001016803.1| cleavage and polyadenylation specific factor 4-like [Xenopus
(Silurana) tropicalis]
gi|89273947|emb|CAJ82303.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 269
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
++ P H +G ++ VC+HWLR LC KGD C FLH+YD RMP C F+ FGEC +D
Sbjct: 53 STCPFRHLNGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMGRMPECYFYSKFGECSNKD 109
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + H + +K+C Y GFC +GP C++RH +
Sbjct: 110 CPFLHIDPASKVKDCPWYDRGFCKHGPACKHRHTR 144
>gi|357625054|gb|EHJ75607.1| cleavage and polyadenylation specific factor 4 [Danaus plexippus]
Length = 287
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD + L+ G P + + AA ++ P G P P H
Sbjct: 11 IKFDIDYALEQQYGALPLPFPGMDKST------AAVCEFYSQPGGCGNGP---QCPYRHV 61
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 62 RGDRT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHIDP 118
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RHV+
Sbjct: 119 ESKIKDCPWYDRGFCRHGPHCRHRHVR 145
>gi|66475446|ref|XP_627539.1| cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1
domains [Cryptosporidium parvum Iowa II]
gi|32398756|emb|CAD98716.1| zf-CCCH zinc finger protein, possible [Cryptosporidium parvum]
gi|46228992|gb|EAK89841.1| cleavage and polyadenylation specificity factor 4-like; 3x Zn C3H1
domains [Cryptosporidium parvum Iowa II]
Length = 178
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCV 121
P+ GR S VCRHW+R++CMKGD C FLHQY+ RMP C ++ +G C ++ +C
Sbjct: 32 PNVRGRHS---VVCRHWIRNMCMKGDFCDFLHQYNYERMPPCFIYQKYGVCVDEALGNCP 88
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRH 150
+KH +D C Y LGFC GP C+ RH
Sbjct: 89 FKHKADDTPLCAQYFLGFCKYGPKCKRRH 117
>gi|70944632|ref|XP_742227.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521084|emb|CAH78930.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 327
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 245 GLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+P N + TP+ + F++K NL LS+ GVWAT ++N K F +
Sbjct: 109 NIPEVYNLDNTPVTSDKIKVFVIKCNQISNLYLSILYGVWATGKNNTRKYMNFFKENYTI 168
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
I +FSVN + FQG AKM + ++ W T G NF V+W+K+ ++ F +
Sbjct: 169 IFLFSVNESGGFQGYAKMVTTPIKNLYENLW--GPITNRLGGNFRVQWIKIAKIDFDVFK 226
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
++ NPYN+NLP+K SRD EL +I + ++ P+ + +A ++ +R
Sbjct: 227 NITNPYNDNLPLKKSRDGTELPLNIASIICNKIHALPNEDFLAGTIYEYKRR 278
>gi|449016115|dbj|BAM79517.1| similar to cleavage and polyadenylation specific factor 4, 30kD
subunit [Cyanidioschyzon merolae strain 10D]
Length = 188
Score = 97.8 bits (242), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
RS VC+HWLR LC KG C F+H+++ +MP C FF +GEC +C+Y+H D +
Sbjct: 58 RSKSLIVCKHWLRGLCKKGIECEFVHRFELDKMPECFFFSRYGECTNDECMYRHVVADSR 117
Query: 131 --ECNMYKLGFCPNGPDCRYRHVK 152
EC Y GFC +GP CRY+HV+
Sbjct: 118 RMECPFYARGFCKHGPRCRYKHVQ 141
>gi|226480092|emb|CAX73342.1| Cleavage and polyadenylation specificity factor subunit 4
[Schistosoma japonicum]
Length = 307
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN--EDIKE 131
R VC+HWLR LC KGD C FLH+YD ++MP C FF FGEC ++C + H + +++
Sbjct: 64 RTVVCKHWLRGLCKKGDDCEFLHEYDMTKMPECYFFSKFGECMNKECPFLHIDPASKVQD 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFC NGP CR RHV+
Sbjct: 124 CPWYDRGFCRNGPLCRNRHVR 144
>gi|154287492|ref|XP_001544541.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408182|gb|EDN03723.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 774
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 76/142 (53%), Gaps = 2/142 (1%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K E ++ + ++G WATQ N K AFD++ +V+L+FSVN++ F
Sbjct: 623 LAAGDVTYFLIKCVAYEMVDAAKKEGTWATQVKNLEKFTNAFDNSRHVVLVFSVNQSGAF 682
Query: 317 QGCAKMTSKIGGS-VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M S G V +W + G FS+ W E F H++NPYN+N
Sbjct: 683 QGYARMDSHPGAEGVERPSWINSLDMP-LGPPFSITWYNTIETRFKYVGHIKNPYNDNHD 741
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QELE G L +L
Sbjct: 742 VTYARDGQELEEECGRTLCGIL 763
>gi|149034886|gb|EDL89606.1| rCG42591, isoform CRA_a [Rattus norvegicus]
Length = 199
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 23 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 79
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 80 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 112
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 42 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 98
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 99 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 131
>gi|114052376|ref|NP_001040511.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
gi|95102612|gb|ABF51244.1| cleavage and polyadenylation specific factor 4 [Bombyx mori]
Length = 288
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 51 SSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFR 110
S G + A P H G R+ VC+HWLR LC KGD C FLH+YD S+MP C F+
Sbjct: 45 SQPGGCGNGAQCPYRHVRGDRT---VVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYA 101
Query: 111 LFGECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
F C ++C + H + + IK+C Y GFC +GP CR+RHV+
Sbjct: 102 RFNACHNKECPFLHIDPESKIKDCPWYDRGFCRHGPHCRHRHVR 145
>gi|256985196|ref|NP_001158004.1| cleavage and polyadenylation specific factor 4-like isoform 3 [Mus
musculus]
Length = 280
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C+
Sbjct: 108 CPLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECL 164
Query: 122 YKHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
+ H +K +C Y GFC GP C+YRHV
Sbjct: 165 FLHLKPVLKLQDCPWYNQGFCKEGPLCKYRHV 196
>gi|320165321|gb|EFW42220.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 184
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 2/84 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDI- 129
R+ ++ VC+HWLR LC KG+ C FLH+YD S+MP C FF+ +G+C +C Y+H + +
Sbjct: 62 RTDKKVVCKHWLRGLCKKGEHCEFLHEYDMSKMPECYFFQKYGQCTNTECQYRHIDPETK 121
Query: 130 -KECNMYKLGFCPNGPDCRYRHVK 152
K+C Y GFC +G C+ RH K
Sbjct: 122 KKDCPWYARGFCRHGAQCKLRHRK 145
>gi|300706691|ref|XP_002995591.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
gi|239604757|gb|EEQ81920.1| hypothetical protein NCER_101464 [Nosema ceranae BRL01]
Length = 159
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMYK 136
+C+HWLR LC KG C F+H+YD +MP C FF GEC +C Y H+ KEC Y
Sbjct: 53 ICKHWLRGLCKKGKKCEFIHEYDLKKMPQCYFFSKLGECTNPECFYLHSVVKRKECAWYN 112
Query: 137 LGFCPNGPDCRYRHVK 152
GFC +G C+ RHV+
Sbjct: 113 RGFCRHGSQCKNRHVR 128
>gi|156088711|ref|XP_001611762.1| YT521-B-like family protein [Babesia bovis]
gi|154799016|gb|EDO08194.1| YT521-B-like family protein [Babesia bovis]
Length = 306
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
N+ + G++ Y+IVKS + +N+ ++ VWAT NE L++A+ NVIL+FS+
Sbjct: 14 NKAKSIYEHGVNVYYIVKSFSDQNVRAALIHNVWATTPKNEVILDKAYQKGGNVILVFSI 73
Query: 311 NRTRHFQGCAKMTSKIG-GSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 369
N + F G A M S+ G S + A+G G++F + W+++ +L F L+N
Sbjct: 74 NGSSRFIGYALMQSRPGHASFNESVFFMANGNKFNGKHFDILWIRVIDLPFTACAKLKNS 133
Query: 370 YNENLPVKISRDCQELEPSIGEQLAALL 397
NE PVK++RD QE++ + G+ L +
Sbjct: 134 LNEYKPVKLARDGQEIDKTTGKALCIIF 161
>gi|443897962|dbj|GAC75300.1| polyadenylation factor I complex, subunit, Yth1 [Pseudozyma
antarctica T-34]
Length = 348
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 10 FDFEGGLDAGPGMPTASNPAIQSDSTA---AAAAAAANANHAAPSSSGAAPDHASAPVPH 66
F FE + A G+ + I D AA H PS P ++A
Sbjct: 48 FSFEHYVKANLGVKLDIDAQICPDYAERLQCPRGAACPRRHVKPSQLNFLPHGSNA---- 103
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHT 125
R ++TVC+HWLR LC KG+ C +LH+YD R+P CRF+ FG C DC+Y H
Sbjct: 104 --LRDPNKRTVCKHWLRGLCKKGEQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHV 161
Query: 126 NEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+ IK EC Y GFCP GP C +H++
Sbjct: 162 DPAIKRRECERYNRGFCPKGPLCPKKHIR 190
>gi|71022693|ref|XP_761576.1| hypothetical protein UM05429.1 [Ustilago maydis 521]
gi|74699712|sp|Q4P384.1|YTH1_USTMA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46101254|gb|EAK86487.1| hypothetical protein UM05429.1 [Ustilago maydis 521]
Length = 366
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIK-- 130
++TVC+HWLR LC K D C +LH+YD R+P CRF+ FG C DC+Y H + IK
Sbjct: 106 KRTVCKHWLRGLCKKDDQCDYLHEYDMRRIPECRFYATFGFCNSGDDCLYLHVDPAIKRR 165
Query: 131 ECNMYKLGFCPNGPDCRYRHVK 152
EC Y GFCP GP C +HV+
Sbjct: 166 ECERYNRGFCPKGPLCTKKHVR 187
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y FC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDARFCKHGPLCRHRHTR 144
>gi|378755778|gb|EHY65804.1| zinc finger protein [Nematocida sp. 1 ERTm2]
Length = 159
Score = 97.4 bits (241), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NE 127
+R VC+HWLR LC KGD C FLH Y +MP C FF +GEC QDC++ H N
Sbjct: 24 KRQENAIVCKHWLRGLCKKGDVCEFLHVYALDKMPECWFFSKYGECSNQDCLFLHIDPNS 83
Query: 128 DIKECNMYKLGFCPNGPDCRYRHVK 152
KEC Y GFC +G CR +H K
Sbjct: 84 KSKECIWYTRGFCRHGNSCRNKHYK 108
>gi|291229317|ref|XP_002734616.1| PREDICTED: cleavage and polyadenylation specificity factor,
putative-like [Saccoglossus kowalevskii]
Length = 276
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
S P H G RS VC+HWLR LC KGD C FLH+YD ++MP C FF FG C ++C
Sbjct: 54 SCPFRHVRGDRS---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECFFFSKFGLCSNKEC 110
Query: 121 VYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR RH +
Sbjct: 111 PFLHIDPESKIKDCAWYDRGFCKHGPHCRNRHTR 144
>gi|66517749|ref|XP_396082.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Apis mellifera]
gi|380029307|ref|XP_003698318.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Apis florea]
Length = 286
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G AS P H
Sbjct: 11 MRFDIEIALDEQYGALPL---PFTGMDKSTAAVCQF--------YPRGTCVKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRTI---VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|340719465|ref|XP_003398174.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus terrestris]
gi|350410464|ref|XP_003489048.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Bombus impatiens]
Length = 286
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G AS P H
Sbjct: 11 MRFDIEIALDEQYGALPL---PFTGMDKSTAAVCQF--------YPRGTCVKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRTI---VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|332028091|gb|EGI68142.1| Cleavage and polyadenylation specificity factor subunit 4
[Acromyrmex echinatior]
Length = 290
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G+ AS P H
Sbjct: 11 MRFDIEVALDEQYGALPL---PFTGMDKSIAAVCQF--------YPKGSCNKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|307200583|gb|EFN80724.1| Cleavage and polyadenylation specificity factor subunit 4
[Harpegnathos saltator]
Length = 285
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G AS P H
Sbjct: 11 MQFDIETALDEQYGALPL---PFTGMDKSIAAVCQF--------YPRGTCVKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|383862768|ref|XP_003706855.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Megachile rotundata]
Length = 286
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G AS P H
Sbjct: 11 MRFDIEIALDEQYGALPL---PFTGMDKSTAAVCQF--------YPRGTCVKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRTI---VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|391333788|ref|XP_003741292.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Metaseiulus occidentalis]
Length = 269
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ F+ E LD G P + D + A A G AS P H
Sbjct: 11 VVFEIELALDQQLGAAPLPFPGM--DRSVALACTF--------YMRGKCTMDASCPFRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 61 KGDRT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACSNKECPFLHIDP 117
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
D IK+C Y GFC +GP CR+RH +
Sbjct: 118 DSKIKDCPWYDRGFCRHGPTCRHRHTR 144
>gi|403285965|ref|XP_003934279.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 216
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 27 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 83
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+RH +
Sbjct: 84 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 116
>gi|345310735|ref|XP_001521535.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 241
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLHQYD ++MP C FF FG+C ++C
Sbjct: 49 CPFRHLSGEKT---VVCKHWLRGLCKKGDQCEFLHQYDVTKMPECYFFSNFGKCSNKECP 105
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + +++C Y GFC NGP C+Y+H +
Sbjct: 106 FLHVDPASRLRDCPWYNQGFCKNGPLCKYQHTR 138
>gi|332373586|gb|AEE61934.1| unknown [Dendroctonus ponderosae]
Length = 294
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 72/147 (48%), Gaps = 14/147 (9%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
FD E L+ G P + +TA + G + P H
Sbjct: 11 FKFDIEIALEEQYGALPLPFPGMDKSTTAVCQFYG--------TQQGCVKG-INCPFRHI 61
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 62 RGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP 118
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RHV+
Sbjct: 119 ESKIKDCPWYDRGFCRHGPHCRHRHVR 145
>gi|426357078|ref|XP_004045875.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Gorilla gorilla gorilla]
gi|221043738|dbj|BAH13546.1| unnamed protein product [Homo sapiens]
Length = 191
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 2 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 58
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 59 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
>gi|332867116|ref|XP_001137528.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 4 [Pan troglodytes]
gi|397489496|ref|XP_003815762.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Pan paniscus]
Length = 191
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 60/93 (64%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 2 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 58
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP CR+RH +
Sbjct: 59 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTR 91
>gi|354466607|ref|XP_003495765.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Cricetulus griseus]
Length = 193
Score = 96.7 bits (239), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P+ H G + VC+HWLR LC KGD C FLHQYD RMPVC F FG C +DC +
Sbjct: 56 PLRHEKGEKI---VVCKHWLRGLCRKGDCCNFLHQYDIDRMPVCYFHSKFGNCSNKDCSF 112
Query: 123 KHTN--EDIKECNMYKLGFCPN-GPDCRYRHV 151
H + ++C Y GFC + GP C+Y HV
Sbjct: 113 LHVKPAPNAQDCPWYDRGFCKDVGPLCKYHHV 144
>gi|221105106|ref|XP_002156784.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Hydra magnipapillata]
Length = 344
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 15/147 (10%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E L+ G+ P + D + AA +N P+ H
Sbjct: 11 IRFDIEIALEEQLGIQPLPFPGM--DKSGAAICDFFISNRCTRGQL--------CPLRHI 60
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN- 126
SG + VC+HWLR LC KGD C FLH+YD +MP C F+ +G+C ++C + H +
Sbjct: 61 SGHQ---MVVCKHWLRGLCKKGDNCEFLHKYDMEKMPECYFYIKYGQCSNKECPFLHLDP 117
Query: 127 -EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y+ GFC +GP C+ RHV+
Sbjct: 118 ADKIKDCAWYERGFCKHGPHCKNRHVR 144
>gi|209878466|ref|XP_002140674.1| zinc finger (CCCH type) domain-containing protein [Cryptosporidium
muris RN66]
gi|209556280|gb|EEA06325.1| zinc finger (CCCH type) domain-containing protein [Cryptosporidium
muris RN66]
Length = 183
Score = 96.3 bits (238), Expect = 5e-17, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 56/89 (62%), Gaps = 6/89 (6%)
Query: 65 PHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCV 121
P+ GR S VCRHW+R++CMKGD C FLHQYD RMP C ++ +G C ++ +C
Sbjct: 34 PNVRGRHS---VVCRHWIRNMCMKGDFCDFLHQYDYERMPPCFTYQKYGVCVDEALGNCP 90
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRH 150
+KH ++ C Y LGFC GP C+ RH
Sbjct: 91 FKHKADETPLCAQYFLGFCKFGPKCKRRH 119
>gi|307183125|gb|EFN70042.1| Cleavage and polyadenylation specificity factor subunit 4
[Camponotus floridanus]
Length = 287
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G AS P H
Sbjct: 11 MRFDIEIALDEQYGALPL---PFTGMDKSIAAVCQF--------YPRGTCSKGASCPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|294866516|ref|XP_002764755.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239864445|gb|EEQ97472.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 151
Score = 96.3 bits (238), Expect = 5e-17, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 69 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED 128
G R +VC+HWL++LCMKGD C FLHQYD +RMP C + G C E+DC +H + D
Sbjct: 69 GTRGRYFSVCKHWLKTLCMKGDKCDFLHQYDVNRMPECVAWVKHGRCTEKDCELRH-DID 127
Query: 129 IKECNMYKLGFCPNGPDCRYRHVK 152
EC YK GFC G CR RH K
Sbjct: 128 TVECQKYKYGFCRLGNMCRLRHEK 151
>gi|159490511|ref|XP_001703218.1| hypothetical protein CHLREDRAFT_108564 [Chlamydomonas reinhardtii]
gi|158270677|gb|EDO96514.1| predicted protein [Chlamydomonas reinhardtii]
Length = 147
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 3/131 (2%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI++S + +N+ +SV+ G WAT R+N+ KL+ AF S+ V LIFSV + FQG A M
Sbjct: 20 RYFIIRSNSLQNIFISVRTGAWATTRTNDPKLDAAFRSSREVRLIFSVMGSNAFQGYATM 79
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+ +G W+ +GR F V+W L EL H+RN N+N V ++RDC
Sbjct: 80 RTSVGAFPKPVIWENGQ---QFGRPFGVEWRVLFELPHDDCNHIRNRLNDNKVVYMARDC 136
Query: 383 QELEPSIGEQL 393
EL G+ L
Sbjct: 137 TELPQEQGDLL 147
>gi|148702474|gb|EDL34421.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_c [Mus
musculus]
Length = 238
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/155 (38%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 1 MEDSEGGLS-FDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDH 59
ME+ GL F F LD T P D +++A N A G
Sbjct: 11 MEEVIAGLQGFTFAFELDVESQKGTGLLPFQGMDKSSSAVC-----NFFA---KGLCVKG 62
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++
Sbjct: 63 MLCPLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKE 119
Query: 120 CVYKHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
C++ H +K +C Y GFC GP C+YRHV
Sbjct: 120 CLFLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 154
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H +PS+ P P+P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 67 HTSPSAQNFQP---PKPLPTHPRDRERVSTVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 123
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
+F +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 124 YWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVR 170
>gi|256985198|ref|NP_080958.2| cleavage and polyadenylation specific factor 4-like isoform 1 [Mus
musculus]
Length = 228
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 1 MEDSEGGLS-FDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDH 59
ME+ GL F F LD T P D +++A + G
Sbjct: 1 MEEVIAGLQGFTFAFELDVESQKGTGLLPFQGMDKSSSAVCNFF--------AKGLCVKG 52
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++
Sbjct: 53 MLCPLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKE 109
Query: 120 CVYKHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
C++ H +K +C Y GFC GP C+YRHV
Sbjct: 110 CLFLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 144
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H +PS+ P P+P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 67 HTSPSAQNFQP---PKPLPTHPRDRERVSTVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 123
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
+F +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 124 YWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVR 170
>gi|390349051|ref|XP_001201949.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Strongylocentrotus purpuratus]
Length = 294
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P H G ++ VC+HWLR LC KGD C FLHQ+D ++MP C FF FG C +D
Sbjct: 25 ALCPFRHVKGDKA---VVCKHWLRGLCKKGDECEFLHQFDMTKMPECFFFAKFGMCSNKD 81
Query: 120 CVYKHTNEDI--KECNMYKLGFCPNGPDCRYRHVK 152
C + H + D K+C Y GFC +GP C+ RHV+
Sbjct: 82 CPFLHIDPDTKRKDCPWYDRGFCKHGPHCKNRHVR 116
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y FC +GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDARFCKHGPLCRHRHTR 144
>gi|237681208|ref|NP_001153741.1| cleavage and polyadenylation specific factor 4, 30kDa [Tribolium
castaneum]
gi|270004678|gb|EFA01126.1| hypothetical protein TcasGA2_TC010339 [Tribolium castaneum]
Length = 280
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 8 LSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHH 67
+ FD E LD G P + D + AA +S P H
Sbjct: 11 IKFDIEVALDEQFGALPLPFPGM--DKSIAAVCQFY-------TSIQGCQKGPQCPFRHV 61
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 62 RGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDP 118
Query: 128 D--IKECNMYKLGFCPNGPDCRYRHVK 152
+ IK+C Y GFC +GP CR+RHV+
Sbjct: 119 ESKIKDCPWYDRGFCRHGPHCRHRHVR 145
>gi|345488132|ref|XP_001604679.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Nasonia vitripennis]
Length = 297
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ FD E LD G +P P D + AA G A+ P H
Sbjct: 11 MRFDIEIALDEQYGALPL---PFTGMDKSVAAVCQF--------YPKGTCTKGAACPFRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHID 116
Query: 127 ED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ +++C Y GFC +GP CR+RHV+
Sbjct: 117 PETKVRDCPWYDRGFCRHGPLCRHRHVR 144
>gi|322698856|gb|EFY90623.1| YT521-B-like family protein [Metarhizium acridum CQMa 102]
Length = 401
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 72/137 (52%), Gaps = 1/137 (0%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYF+VKS N N+ +S + G+W TQ N +AF +V+L FS+N+++ FQG AK
Sbjct: 180 TRYFLVKSSNTTNVYMSRRDGLWITQAKNGPLFTQAFRECRSVVLFFSINKSKAFQGYAK 239
Query: 322 MTSKIGGSVGGGNWKYAHG-TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISR 380
MTS S+ W + H F + W+ E F + L+NPYNE PV + R
Sbjct: 240 MTSAPDHSIPHPPWIVSTTHDMHTTAPFRIDWINEAETPFSQVGDLKNPYNEYNPVFVGR 299
Query: 381 DCQELEPSIGEQLAALL 397
D QE G + ++
Sbjct: 300 DGQEYSEDCGRFMMGVM 316
>gi|225718956|gb|ACO15324.1| Cleavage and polyadenylation specificity factor subunit 4 [Caligus
clemensi]
Length = 295
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
S P H G ++ VC+HWLR LC KGD C FLH+YD S+MP C F+ F C ++
Sbjct: 53 TSCPFRHVRGDKTI---VCKHWLRGLCKKGDTCEFLHEYDMSKMPECYFYSRFNACHNKE 109
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + H + I++C Y GFC +GP CR+RHV+
Sbjct: 110 CPFLHIDPESKIRDCPWYDRGFCRHGPSCRHRHVR 144
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 59 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 115
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+R +
Sbjct: 116 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTR 148
>gi|358383840|gb|EHK21501.1| hypothetical protein TRIVIDRAFT_152392, partial [Trichoderma virens
Gv29-8]
Length = 210
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 5/138 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
SRYF+VKS N N+E+S + G+W T +N + AF +NV LIFSVN+++ FQG A+
Sbjct: 4 SRYFLVKSFNMTNVEMSQRDGLWITSETNGIRFAHAFQQYKNVFLIFSVNKSKAFQGYAR 63
Query: 322 MTSKIGGSVGGGNWKYAHGTAHY--GRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
MT+ S+ W T + F ++WL F K LRNP N+ PV +
Sbjct: 64 MTTLPTASIPPAKW---MSTISWEPSAPFRIQWLNTRRTEFWKLGELRNPLNDGEPVFVG 120
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE + G ++ ++
Sbjct: 121 RDGQEFPEACGRKMLRVM 138
>gi|148702473|gb|EDL34420.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_b [Mus
musculus]
Length = 209
Score = 95.1 bits (235), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C++
Sbjct: 23 PLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLF 79
Query: 123 KHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
H +K +C Y GFC GP C+YRHV
Sbjct: 80 LHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 111
>gi|294933061|ref|XP_002780578.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus
ATCC 50983]
gi|239890512|gb|EER12373.1| mRNA 3'-end-processing protein ytH1, putative [Perkinsus marinus
ATCC 50983]
Length = 253
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMY 135
+VC+HWL++LCMKGD C FLHQYD +RMP C + G C E+DC +H E + EC Y
Sbjct: 115 SVCKHWLKTLCMKGDKCDFLHQYDVNRMPECVAWVKHGRCTEKDCELRHDIETV-ECQKY 173
Query: 136 KLGFCPNGPDCRYRHVK 152
K GFC G CR RH K
Sbjct: 174 KYGFCRLGNMCRLRHEK 190
>gi|198430431|ref|XP_002129809.1| PREDICTED: similar to Cleavage and polyadenylation specificity
factor subunit 4 (Cleavage and polyadenylation
specificity factor 30 kDa subunit) (CPSF 30 kDa subunit)
(NS1 effector domain-binding protein 1) (Neb-1) (No
arches homolog) [Ciona intestinalis]
Length = 286
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A+ P H G ++ VC+HWLR LC KGD C FLH+YD S+MP C F+ FG C +D
Sbjct: 53 ANCPFRHVLGDKA---IVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFGRCDNKD 109
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
C Y+H + IK+C Y GFC +G C++RH
Sbjct: 110 CQYQHIDPASKIKDCPWYDRGFCKHGATCKHRH 142
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + IK+C Y GFC +GP CR+R +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTR 144
>gi|21536232|ref|NP_084070.1| cleavage and polyadenylation specific factor 4-like isoform 2 [Mus
musculus]
gi|12836748|dbj|BAB23796.1| unnamed protein product [Mus musculus]
Length = 190
Score = 94.7 bits (234), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/92 (47%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C++
Sbjct: 4 PLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLF 60
Query: 123 KHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
H +K +C Y GFC GP C+YRHV
Sbjct: 61 LHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 92
>gi|281345617|gb|EFB21201.1| hypothetical protein PANDA_015854 [Ailuropoda melanoleuca]
Length = 102
Score = 94.7 bits (234), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE--DIKECNM 134
VC+HWLR LC KGD C FLHQYD +RMP C F FG+C ++C + H + ++C
Sbjct: 3 VCKHWLRGLCKKGDQCSFLHQYDVTRMPECYFHSKFGDCNNKECSFLHVKPAFNTRDCPW 62
Query: 135 YKLGFCPN-GPDCRYRHV 151
Y GFC + GP C++RHV
Sbjct: 63 YDQGFCKDAGPLCKHRHV 80
>gi|268536646|ref|XP_002633458.1| Hypothetical protein CBG06226 [Caenorhabditis briggsae]
Length = 768
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
+ P+ H G ++ VC+HWLR LC KGD C FLH+YD ++MP C FF + C ++C
Sbjct: 68 TCPLRHIDGEKA---VVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNREC 124
Query: 121 VYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
++H + + +K+C Y GFC +GP C++RH
Sbjct: 125 PFRHIDPETKLKDCPWYDRGFCRHGPYCKHRH 156
>gi|334322934|ref|XP_001378504.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Monodelphis domestica]
Length = 312
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 5/93 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H G ++ VC+HWLR LC K D C FLHQYD ++MP C F+ FGEC ++C+
Sbjct: 55 CPFRHDDGEKT---VVCKHWLRGLCKKSDHCKFLHQYDITKMPECYFYSKFGECSNKECL 111
Query: 122 YKHTNE--DIKECNMYKLGFCPNGPDCRYRHVK 152
+ H + I++C Y GFC G C++RH +
Sbjct: 112 FLHADPAFKIRDCPWYDQGFCKYGLLCKFRHTR 144
>gi|241711939|ref|XP_002412070.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
gi|215505142|gb|EEC14636.1| cleavage and polyadenylation specificity factor, putative [Ixodes
scapularis]
Length = 281
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 15/149 (10%)
Query: 6 GGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVP 65
G + F+ E L+ G P + D + AA + + +S+ P
Sbjct: 9 GNVVFEVEIALEQQLGALPLPFPGM--DKSGAAVCCFYVQGNCSKASA--------CPFR 58
Query: 66 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 125
H G R+ VC+HWLR LC KGD C FLH++D ++MP C F+ F C +DC + H
Sbjct: 59 HVKGDRT---VVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKDCPFLHI 115
Query: 126 NED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ + IK+C Y GFC +GP+CR+RH +
Sbjct: 116 DPEAKIKDCPWYDRGFCRHGPNCRHRHTR 144
>gi|336365876|gb|EGN94225.1| hypothetical protein SERLA73DRAFT_78143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378558|gb|EGO19716.1| hypothetical protein SERLADRAFT_453661 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H +PS+ P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 67 HTSPSAQNFQPPKQ---LPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 123
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
+F +G C D C+Y H E EC YK GFC GP C +HV+
Sbjct: 124 WWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVR 170
>gi|85690955|ref|XP_965877.1| hypothetical protein ECU01_0430 [Encephalitozoon cuniculi GB-M1]
gi|19068444|emb|CAD24912.1| ZINC FINGER PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449329823|gb|AGE96092.1| zinc finger protein [Encephalitozoon cuniculi]
Length = 176
Score = 94.4 bits (233), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECNM 134
VC+HWLR LC KG C F+H+YD SRMP C FF +GEC +C Y H N KEC
Sbjct: 51 VCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNYIHIDPNSSSKECPW 110
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC NG C+ +HV+
Sbjct: 111 YNRGFCRNGASCKNKHVR 128
>gi|154332864|ref|XP_001562694.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134059697|emb|CAM41819.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 354
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT-- 125
S R+ + VC+HWLR C+ GD C +LH+YD +P C FF GEC +C + HT
Sbjct: 52 SAYRTVQTKVCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTKP 111
Query: 126 NEDIKECNMYKLGFCPNGPDCRYRHVK 152
NE EC Y+ GFCP GP CR RHVK
Sbjct: 112 NESQPECAAYRRGFCPLGPKCRLRHVK 138
>gi|429961729|gb|ELA41274.1| hypothetical protein VICG_01647 [Vittaforma corneae ATCC 50505]
Length = 176
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKECNM 134
VC+HWLR LC K + C FLH+Y+ +MP C FF ++G C DC++ H D +EC
Sbjct: 53 VCKHWLRGLCKKNEKCEFLHEYNLKKMPECFFFNVYGVCNNSDCIFLHLRPDSAARECIW 112
Query: 135 YKLGFCPNGPDCRYRH 150
YK GFC NG C+ +H
Sbjct: 113 YKRGFCKNGASCKNKH 128
>gi|390176610|ref|XP_001356742.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
gi|388858696|gb|EAL33807.2| GA17582 [Drosophila pseudoobscura pseudoobscura]
Length = 282
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
Query: 51 SSSGAAPDHASA-PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFF 109
+ SG D SA P H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+
Sbjct: 45 TRSGQECDKGSACPFRHIRGDRTI---VCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFY 101
Query: 110 RLFGECREQDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
F C ++C + H + +K+C YK GFC +GP CR++H++
Sbjct: 102 SRFNACHNKECPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLR 146
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 43 ANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSR 102
N H PS P +P H R TVC+HWLR LC KGDAC FLH+Y+ R
Sbjct: 63 CNLRHTNPSMQNFQPPKQ---LPTHPRERERLSTVCKHWLRGLCKKGDACEFLHEYNLRR 119
Query: 103 MPVCRFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
MP C ++ +G C D C+Y H E EC YK GFC GP C +H++
Sbjct: 120 MPECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPSCPRKHIR 170
>gi|396080745|gb|AFN82366.1| zinc finger domain-containing protein [Encephalitozoon romaleae
SJ-2008]
Length = 176
Score = 93.6 bits (231), Expect = 3e-16, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECNM 134
VC+HWLR LC KG C F+H+YD SRMP C FF +GEC +C Y H N KEC
Sbjct: 51 VCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNYIHIDPNSSSKECPW 110
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC NG C+ +HV+
Sbjct: 111 YNRGFCRNGASCKNKHVR 128
>gi|237836783|ref|XP_002367689.1| YT521-B-like family domain-containing protein [Toxoplasma gondii
ME49]
gi|211965353|gb|EEB00549.1| YT521-B-like family domain-containing protein [Toxoplasma gondii
ME49]
Length = 496
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 19/148 (12%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FI++S N+E+++Q +WAT+ N+A L A + + V+L+FSVN T HF G A M
Sbjct: 54 RFFILRSRIAYNIEVAMQYNMWATRAHNDAVLGAALTACKYVVLLFSVNNTHHFCGWAVM 113
Query: 323 TSKIG-------------GSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 369
S+ G G GG ++ G+ F ++W++ L F + L NP
Sbjct: 114 RSRPGQCRFKSDLFRGAEGPHGGSQSRFE------GKTFDLEWIRKMPLDFRECEGLLNP 167
Query: 370 YNENLPVKISRDCQELEPSIGEQLAALL 397
N+NLPV +RD QE+ P++G + +
Sbjct: 168 LNQNLPVYRARDGQEVAPAVGRAVCGIF 195
>gi|117935458|gb|ABK57069.1| IP02511p [Drosophila melanogaster]
Length = 320
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
++ P H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++
Sbjct: 79 SACPFRHIRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKE 135
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + H + +K+C YK GFC +GP CR++H++
Sbjct: 136 CPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLR 170
>gi|109492168|ref|XP_001081632.1| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Rattus norvegicus]
gi|392351710|ref|XP_221075.5| PREDICTED: cleavage and polyadenylation specific factor 4-like
[Rattus norvegicus]
Length = 228
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 72/157 (45%), Gaps = 19/157 (12%)
Query: 1 MEDSEGGL---SFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAP 57
ME+ GL +F FE ++ G + S+A A G
Sbjct: 1 MEEVIAGLQGFTFTFEQDVELQRGTGLLPFQGMDKSSSAVCNFFA----------KGLCV 50
Query: 58 DHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE 117
P+ H G + VC+HWLR LC K D C FLHQYD SRMPVC F FG C
Sbjct: 51 KGMLCPLRHEQGEK---MVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYFHSKFGNCNN 107
Query: 118 QDCVYKHTN--EDIKECNMYKLGFCPN-GPDCRYRHV 151
++C + H +++C Y GFC GP C+YRHV
Sbjct: 108 KECPFLHLKPVPKLQDCPWYDQGFCKEVGPLCKYRHV 144
>gi|17137188|ref|NP_477156.1| clipper [Drosophila melanogaster]
gi|7296160|gb|AAF51453.1| clipper [Drosophila melanogaster]
gi|90855755|gb|ABE01239.1| IP02509p [Drosophila melanogaster]
gi|220952324|gb|ACL88705.1| Clp-PA [synthetic construct]
gi|220958742|gb|ACL91914.1| Clp-PA [synthetic construct]
Length = 296
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
++ P H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++
Sbjct: 55 SACPFRHIRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKE 111
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + H + +K+C YK GFC +GP CR++H++
Sbjct: 112 CPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLR 146
>gi|847869|gb|AAA67954.1| zinc finger protein [Drosophila melanogaster]
Length = 296
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
++ P H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++
Sbjct: 55 SACPFRHIRGDRT---IVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKE 111
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + H + +K+C YK GFC +GP CR++H++
Sbjct: 112 CPFLHIDPQSKVKDCPWYKRGFCRHGPHCRHQHLR 146
>gi|303388037|ref|XP_003072253.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303301392|gb|ADM10893.1| zinc finger domain-containing protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 176
Score = 93.2 bits (230), Expect = 4e-16, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECNM 134
VC+HWLR LC KG C F+H+YD SRMP C FF +GEC +C Y H N KEC
Sbjct: 51 VCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNYIHIDPNSSSKECPW 110
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC NG C+ +HV+
Sbjct: 111 YNRGFCRNGASCKNKHVR 128
>gi|50556380|ref|XP_505598.1| YALI0F18876p [Yarrowia lipolytica]
gi|49651468|emb|CAG78407.1| YALI0F18876p [Yarrowia lipolytica CLIB122]
Length = 381
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 85/196 (43%), Gaps = 48/196 (24%)
Query: 250 TNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFS 309
+ R+ T P RYF+ KS +LE+S + +W+TQ NEA LN+AF NV LIFS
Sbjct: 185 SERSQTSSPPLTDRYFVCKSLTVRDLEVSRENSLWSTQSHNEAMLNKAFRDGSNVYLIFS 244
Query: 310 VNRTRHFQGCAKMTSKI----------------------------GGSVGGGN------- 334
NRT F GCAKM I G + G
Sbjct: 245 ANRTGEFFGCAKMIEPIPPKEKTISSVITTSSSHVYSPVITMTPSSGEIPAGRIVHDVER 304
Query: 335 ----WKYAHGT-------AHYGRNFSVKWL--KLCELSFHKTRHLRNPYNENLPVKISRD 381
W+ +++ F ++WL + + F +TRHLRN N VK++RD
Sbjct: 305 ASLFWEVLDSVSKPVEEESNWTSPFRIQWLGNRNRRVHFSETRHLRNSLNSGREVKVARD 364
Query: 382 CQELEPSIGEQLAALL 397
E+EPS+G + +
Sbjct: 365 GTEIEPSVGRTIVEMF 380
>gi|401416519|ref|XP_003872754.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322488979|emb|CBZ24228.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 343
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT-- 125
S R+ + VC+HWLR C+ GD C +LH+YD +P C FF GEC +C + HT
Sbjct: 52 SAYRTVQTKVCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTKP 111
Query: 126 NEDIKECNMYKLGFCPNGPDCRYRHVK 152
NE EC Y+ GFCP GP CR RHVK
Sbjct: 112 NESQPECAAYRRGFCPLGPKCRLRHVK 138
>gi|321469733|gb|EFX80712.1| hypothetical protein DAPPUDRAFT_51128 [Daphnia pulex]
Length = 242
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 6 GGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVP 65
+ FD E L+ G P + STA + G + P
Sbjct: 9 ANIKFDIEVALEQQLGAQNLPFPGMDK-STAMVCTLF---------TKGQCQRASFCPYR 58
Query: 66 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 125
H R+ R VC+HWLR LC KGD C FLH++D ++MP C F+ F C ++C + H
Sbjct: 59 H---LRADRTIVCKHWLRGLCKKGDQCEFLHEFDMAKMPECYFYARFSACHNKECPFLHI 115
Query: 126 NED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ + IK+C Y GFC +GP CR+RHV+
Sbjct: 116 DPETKIKDCPWYDRGFCRHGPTCRHRHVR 144
>gi|149054707|gb|EDM06524.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 152
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G + VC+HWLR LC K D C FLHQYD SRMPVC F FG C ++C
Sbjct: 3 CPLRHEQGEK---MVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYFHSKFGNCNNKECP 59
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHV 151
+ H +++C Y GFC GP C+YRHV
Sbjct: 60 FLHLKPVPKLQDCPWYDQGFCKEGPLCKYRHV 91
>gi|427788143|gb|JAA59523.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Rhipicephalus pulchellus]
Length = 283
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 6 GGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVP 65
G + F+ E L+ G P + D + AA + + +S+ P
Sbjct: 9 GNVVFELEMALEQQLGALPLPFPGM--DKSGAAVCCFYVQGNCSKASA--------CPFR 58
Query: 66 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 125
H G R+ VC+HWLR LC KGD C FLH++D ++MP C F+ F C ++C + H
Sbjct: 59 HVKGDRT---VVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHI 115
Query: 126 NED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ + IK+C Y GFC +GP CR+RH +
Sbjct: 116 DPEAKIKDCPWYDRGFCRHGPICRHRHTR 144
>gi|339896984|ref|XP_001463534.2| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania infantum JPCM5]
gi|398011122|ref|XP_003858757.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Leishmania donovani]
gi|321399000|emb|CAM65899.2| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania infantum JPCM5]
gi|322496967|emb|CBZ32037.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Leishmania donovani]
Length = 336
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT-- 125
S R+ + VC+HWLR C+ GD C +LH+YD +P C FF GEC +C + HT
Sbjct: 52 SAYRTVQTKVCKHWLRGACVNGDNCLYLHEYDNRYVPQCAFFERVGECTNPECPFLHTKP 111
Query: 126 NEDIKECNMYKLGFCPNGPDCRYRHVK 152
NE EC Y+ GFCP GP CR RHVK
Sbjct: 112 NESQPECAAYRRGFCPLGPKCRLRHVK 138
>gi|324506295|gb|ADY42692.1| Cleavage and polyadenylation specificity factor subunit 4 [Ascaris
suum]
Length = 342
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P+ H G ++ VC+HWLR LC KGD C FLH+YD S+MP C FF + C ++
Sbjct: 79 AVCPLRHIVGDKA---VVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRE 135
Query: 120 CVYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
C ++H + + IK+C Y GFC +GP C++RH
Sbjct: 136 CPFRHIDPESKIKDCPWYDRGFCRHGPYCKHRH 168
>gi|346471839|gb|AEO35764.1| hypothetical protein [Amblyomma maculatum]
gi|346471841|gb|AEO35765.1| hypothetical protein [Amblyomma maculatum]
Length = 283
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 6 GGLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVP 65
G + F+ E L+ G P + D + AA + + +S+ P
Sbjct: 9 GNVVFELEIALEQQLGALPLPFPGM--DKSGAAVCCFYVQGNCSKASA--------CPFR 58
Query: 66 HHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT 125
H G R+ VC+HWLR LC KGD C FLH++D ++MP C F+ F C ++C + H
Sbjct: 59 HVKGDRT---VVCKHWLRGLCKKGDQCEFLHEFDMTKMPECYFYSRFNACSNKECPFLHI 115
Query: 126 NED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ + IK+C Y GFC +GP CR+RH +
Sbjct: 116 DPEAKIKDCPWYDRGFCRHGPSCRHRHTR 144
>gi|388578834|gb|EIM19168.1| hypothetical protein WALSEDRAFT_70821 [Wallemia sebi CBS 633.66]
Length = 346
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 85/144 (59%), Gaps = 18/144 (12%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFI+KS E+L SV++ W+TQ NE L++A+ S++ VIL+FS+NR+ + G AK
Sbjct: 221 TRYFILKSHRFEDLLESVKKCKWSTQAHNEYVLDKAYRSSKQVILLFSINRSGGWFGYAK 280
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MTS I +FS++WLK+ L F T+ +RN +N N +K+SRD
Sbjct: 281 MTSGI-----------------IENSFSLEWLKVQFLPFSYTK-IRNHFNGNREIKVSRD 322
Query: 382 CQELEPSIGEQLAALLYLEPDSEL 405
E+EP IG+QL + P ++
Sbjct: 323 GTEVEPGIGQQLLDIWETAPIQDV 346
>gi|402593601|gb|EJW87528.1| cleavage and polyadenylation specific factor 4 [Wuchereria
bancrofti]
Length = 337
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P+ H G ++ VC+HWLR LC KGD C FLH+YD S+MP C FF + C ++
Sbjct: 74 AVCPLRHIVGDKA---VVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRE 130
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
C ++H + IK+C Y GFC +GP C++RH
Sbjct: 131 CPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRH 163
>gi|170586316|ref|XP_001897925.1| zinc finger protein [Brugia malayi]
gi|158594320|gb|EDP32904.1| zinc finger protein, putative [Brugia malayi]
Length = 337
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 5/93 (5%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD 119
A P+ H G ++ VC+HWLR LC KGD C FLH+YD S+MP C FF + C ++
Sbjct: 74 AVCPLRHIVGDKA---VVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRE 130
Query: 120 CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
C ++H + IK+C Y GFC +GP C++RH
Sbjct: 131 CPFRHIDPESKIKDCPWYDRGFCRHGPFCKHRH 163
>gi|392597302|gb|EIW86624.1| hypothetical protein CONPUDRAFT_134023 [Coniophora puteana
RWD-64-598 SS2]
Length = 292
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PSS P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 65 HTTPSSQNFQPPKQ---LPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 121
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y+ GFC GP C +HV+
Sbjct: 122 WWYAKYGYCSAGDECLYAHPKERRAECPDYRRGFCKLGPMCPRKHVR 168
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 64 VPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVY 122
+P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C +F +G C D C+Y
Sbjct: 81 LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWFAKYGYCSAGDECLY 140
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
H E EC Y GFC GP C +HV+
Sbjct: 141 AHPKERRVECPDYNRGFCKLGPSCPRKHVR 170
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS+ P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 67 HTTPSAQNFQPPKQ---LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 123
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC YK GFC GP C +HV+
Sbjct: 124 WWYAKYGYCSAGDECLYAHPKERRIECPDYKRGFCKLGPTCPRKHVR 170
>gi|440802647|gb|ELR23576.1| CCCHtype Zn finger-containing protein [Acanthamoeba castellanii
str. Neff]
Length = 284
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 4/84 (4%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ--DCVYKHTN--EDIK 130
+ VC+HWLR LC KG++C +LH+Y +MP+C FF FGEC +C+++H + E ++
Sbjct: 69 KEVCKHWLRGLCKKGESCEYLHEYRLDKMPICYFFSKFGECSNPSGECMFRHVSPEEKMR 128
Query: 131 ECNMYKLGFCPNGPDCRYRHVKLP 154
EC Y GFC +GP CR++HV+ P
Sbjct: 129 ECPWYARGFCKHGPRCRHKHVRKP 152
>gi|74025542|ref|XP_829337.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|29825363|gb|AAO92322.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei rhodesiense]
gi|70834723|gb|EAN80225.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma brucei brucei strain 927/4 GUTat10.1]
Length = 277
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 86/185 (46%), Gaps = 20/185 (10%)
Query: 26 SNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH-HSGRRSFRQTVCRHWLRS 84
++ A + A A A + P G + A+ P H S +S R VC+HWLR
Sbjct: 9 TSLAFEDTLPVEAPATAKRSEICQPFQHGKCRNGAACPERHVLSQFKSMRLEVCKHWLRG 68
Query: 85 LCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECNMYKLGFCPN 142
C+ G+ C +LH+YD +P C F++ GEC +C ++H E EC Y+ GFCP
Sbjct: 69 ACVNGENCVYLHEYDDRYVPACAFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPL 128
Query: 143 GPDCRYRHVKLP------------GPPPSVEEVLQKIQQISSYNHGNPNKHFQQRGAFSH 190
GP CR RHV P GP ++ +Q++ YN + ++ +QR
Sbjct: 129 GPKCRLRHVFRPPCVFYLTGFCPLGPKCALGHPVQQL-----YNRNDVSERLRQRMLIER 183
Query: 191 QTDKS 195
D S
Sbjct: 184 ADDPS 188
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 64 VPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVY 122
V H R TVC+HWLR LC KGDAC FLH+Y+ RMP C ++ FG C+ D C+Y
Sbjct: 79 VSMHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKFGYCQAGDECLY 138
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
H E EC YK GFC GP C +HV+
Sbjct: 139 AHPKEKKIECPDYKRGFCKLGPHCPRKHVR 168
>gi|193624968|ref|XP_001945316.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Acyrthosiphon pisum]
Length = 280
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 76/148 (51%), Gaps = 17/148 (11%)
Query: 8 LSFDFEGGLDAGPG-MPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
+ F+ E LD G +P N D + AA + G+ A P+ H
Sbjct: 11 IKFNVEIALDEQHGALPLPFN---GMDKSIAAVCSF--------YPKGSCSKGALCPMRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F C ++C + H +
Sbjct: 60 VRGDRT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFNACHNKECPFLHID 116
Query: 127 --EDIKECNMYKLGFCPNGPDCRYRHVK 152
+K+C Y GFC +GP C+++HV+
Sbjct: 117 PESKLKDCPWYDRGFCRHGPHCKHKHVR 144
>gi|331226571|ref|XP_003325955.1| hypothetical protein PGTG_07785 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309304945|gb|EFP81536.1| hypothetical protein PGTG_07785 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 425
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIK--E 131
+TVC+HWLR LC KG++C FLH+Y+ MP C FF +G C D C+Y H +E ++ E
Sbjct: 124 KTVCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLHVDERMRVLE 183
Query: 132 CNMYKLGFCPNGPDCRYRHVKLP 154
C ++ GFCP GPDC +H++ P
Sbjct: 184 CMDFRRGFCPKGPDCPQKHIRRP 206
>gi|157865076|ref|XP_001681246.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania major strain Friedlin]
gi|68124541|emb|CAJ02669.1| putative cleavage and polyadenylation specificity factor 30 kDa
subunit [Leishmania major strain Friedlin]
Length = 339
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT-- 125
S R+ + VC+HWLR C+ GD C +LH YD +P C FF GEC +C + HT
Sbjct: 52 SAYRTVQTKVCKHWLRGACVNGDNCLYLHAYDNRYVPQCAFFERVGECTNPECPFLHTKP 111
Query: 126 NEDIKECNMYKLGFCPNGPDCRYRHVK 152
NE EC Y+ GFCP GP CR RHVK
Sbjct: 112 NESQPECAAYRRGFCPLGPKCRLRHVK 138
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666
SS1]
Length = 296
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
Query: 32 SDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDA 91
S + + H PS+ P +P H R TVC+HWLR LC KGDA
Sbjct: 52 SQTGCPLGPSLCPLRHTNPSAQNFQPPKQ---LPTHPRDRERLATVCKHWLRGLCKKGDA 108
Query: 92 CGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRH 150
C FLH+Y+ RMP C ++ +G C D C+Y H E EC YK GFC GP C +H
Sbjct: 109 CEFLHEYNLRRMPECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPKCPRKH 168
Query: 151 VK 152
++
Sbjct: 169 IR 170
>gi|440493907|gb|ELQ76329.1| Polyadenylation factor I complex, subunit, Yth1 (CPSF subunit)
[Trachipleistophora hominis]
Length = 187
Score = 92.0 bits (227), Expect = 9e-16, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKE 131
+ VC+HWLR LC K + C FLH+Y+ +MP C FF +GEC +C + H N + KE
Sbjct: 50 KAVVCKHWLRGLCKKNEKCEFLHEYNLKKMPECWFFSKYGECSNTECHFLHIDPNSESKE 109
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C YK GFC +G CR +HVK
Sbjct: 110 CLWYKRGFCRHGLMCRNKHVK 130
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS+ P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 53 HTTPSTQNFQPPKQ---LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPDC 109
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y GFC GPDC +H++
Sbjct: 110 WWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPDCPRKHIR 156
>gi|428175385|gb|EKX44275.1| hypothetical protein GUITHDRAFT_46950, partial [Guillardia theta
CCMP2712]
Length = 93
Score = 92.0 bits (227), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/78 (51%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK--ECNM 134
VC+HWLRS C KGD C +LHQYD +RMP+C FF G+C + DC + H + K EC
Sbjct: 1 VCKHWLRSQCKKGDQCEYLHQYDMTRMPLCHFFA-DGQCTKDDCQFLHIRPEDKVVECPW 59
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC +GP CR +H +
Sbjct: 60 YARGFCKHGPKCRKKHAR 77
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 43 ANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSR 102
+ H PS P +P H R TVC+HWLR LC KGDAC FLH+Y+ R
Sbjct: 63 CHLRHTTPSVQNFQP---PKQLPTHPRERERLSTVCKHWLRGLCKKGDACEFLHEYNLRR 119
Query: 103 MPVCRFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
MP C ++ +G C D C+Y H E EC YK GFC GP C +H++
Sbjct: 120 MPECWWYAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPSCPRKHIR 170
>gi|258597696|ref|XP_001348366.2| conserved protein, unknown function [Plasmodium falciparum 3D7]
gi|255528795|gb|AAN36805.2| conserved protein, unknown function [Plasmodium falciparum 3D7]
Length = 572
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 7/204 (3%)
Query: 247 PNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVIL 306
PN + N + + FI+K +L LS+ GVWAT ++N K F +I
Sbjct: 356 PNVYDLNNNLIVAEKMKVFIIKCNQISHLYLSILYGVWATGKNNTRKFVNLFKDNYTIIF 415
Query: 307 IFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 366
+FSVN + FQG AKM + ++ W T+ G NF ++W+K+ ++ F +H+
Sbjct: 416 LFSVNESGGFQGYAKMVTMPIKNLYENLW--GPITSRLGGNFRIQWIKMAKIDFDNFKHI 473
Query: 367 RNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
NPYN+NLP+K SRD EL ++ L + P+ + + ++ +R + +N
Sbjct: 474 VNPYNDNLPLKKSRDGTELPLNVASILCNKMNDMPNEDFLTGTIYEFKRRINHSSFFINL 533
Query: 427 D-----NGGDNPDIVPFEDNEEEE 445
N DI+ F N++ +
Sbjct: 534 HKQNILNTNTRWDILIFNLNQKSD 557
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 30/116 (25%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-- 119
+ G+ S +C H+++++CMK C +LHQ SR+P C+ + + C ++
Sbjct: 64 VDIKQKKGKHS---IICIHYIKNMCMKNLFCNYLHQLIYSRIPTCKNYMKYNYCADRVRG 120
Query: 120 -CVYKHT----------NEDIKE--------------CNMYKLGFCPNGPDCRYRH 150
C+++H NE E C Y LGFC G CR H
Sbjct: 121 CCMFRHNLDNSNNNLYYNESKDEYLDDALKFLHEKNICVNYLLGFCSLGYGCRKIH 176
>gi|16740610|gb|AAH16190.1| Cleavage and polyadenylation specific factor 4-like [Mus musculus]
Length = 176
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C+
Sbjct: 3 CPLRHEQGEKL---VVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECL 59
Query: 122 YKHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
+ H +K +C Y GFC GP C+YRHV
Sbjct: 60 FLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 92
>gi|261335311|emb|CBH18305.1| CPSF 30 kDa subunit [Trypanosoma brucei gambiense DAL972]
Length = 277
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 26 SNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH-HSGRRSFRQTVCRHWLRS 84
++ A + A A A + P G + A+ P H S +S R VC+HWLR
Sbjct: 9 TSLAFEDTLPVEAPATAKRSEICQPFQHGKCRNGAACPERHVLSQFKSMRLEVCKHWLRG 68
Query: 85 LCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECNMYKLGFCPN 142
C+ G+ C +LH+YD +P C F++ GEC +C ++H E EC Y+ GFCP
Sbjct: 69 ACVNGENCVYLHEYDDRYVPACAFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPL 128
Query: 143 GPDCRYRHVKLP 154
GP CR RHV P
Sbjct: 129 GPKCRLRHVFRP 140
>gi|449684566|ref|XP_004210660.1| PREDICTED: YTH domain family protein 2-like [Hydra magnipapillata]
Length = 514
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 89/167 (53%), Gaps = 10/167 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
SR+FI+KS + +++ S++ W + +LNEAF + + L+FSVN + H
Sbjct: 340 SRFFIIKSYSEDDIFRSIKYSSWTSTEHGNRRLNEAFIEQKKTGIKTPMYLLFSVNSSGH 399
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+MTS++ ++ G W GR F V+W+ + ++ + RH+R NEN P
Sbjct: 400 FCGIAEMTSEVDLNIETGIWVQDKWK---GR-FDVRWIYVKDVPNNILRHIRLENNENKP 455
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAK 422
V SRD QE+ P G+Q+ +++ + A KR+EE AK
Sbjct: 456 VTNSRDTQEVSPEKGKQVIKIIHNYQAQTSIFDDFAHYEKRQEEDAK 502
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 66 HTTPSVQNFQPPRQ---LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 122
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
+F +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 123 WWFAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPTCPRKHVR 169
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS++ P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 71 HTTPSTANFQPPKQ---LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 127
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 128 WWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCQLGPTCPRKHVR 174
>gi|328856795|gb|EGG05915.1| hypothetical protein MELLADRAFT_29924 [Melampsora larici-populina
98AG31]
Length = 112
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 3/83 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIK--E 131
+TVC+HWLR LC KG++C FLH+Y+ MP C FF +G C D C+Y H +E ++ E
Sbjct: 6 KTVCKHWLRGLCKKGNSCEFLHEYNLRTMPECWFFGKYGFCSNGDECMYLHVDERMRVLE 65
Query: 132 CNMYKLGFCPNGPDCRYRHVKLP 154
C Y+ GFC GP C +H++ P
Sbjct: 66 CMDYRRGFCSKGPTCSQKHIRRP 88
>gi|391327033|ref|XP_003738013.1| PREDICTED: uncharacterized protein LOC100900378 [Metaseiulus
occidentalis]
Length = 830
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 12/173 (6%)
Query: 233 GTQTTQMQNLPNGLPNQTNRNATPLPQGI--SRYFIVKSCNRENLELSVQQGVWATQRSN 290
G + T Q L + L + N N + L I +R+F++KS + +++ S++ +W +
Sbjct: 518 GEEQTSTQLLQD-LIRKNNYNPSELDARIEGARFFVIKSYSEDDVHRSIKYSIWCSTEHG 576
Query: 291 EAKLNEAFDSAEN-----VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYG 345
KL++AF +N + L +SVN + HF G A+MTS + G W +
Sbjct: 577 NKKLDQAFRHQKNKETNPIYLFYSVNGSGHFCGMAQMTSSVDYDTLTGVW----AQDKWK 632
Query: 346 RNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
F+VKW+ + ++ + RH+R NEN PV SRD QE+ P G Q+ +++
Sbjct: 633 GKFNVKWIYVKDIPNQELRHIRLENNENKPVTNSRDTQEVPPDKGRQVLEIMH 685
>gi|429965174|gb|ELA47171.1| hypothetical protein VCUG_01360 [Vavraia culicis 'floridensis']
Length = 187
Score = 91.7 bits (226), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKE 131
+ VC+HWLR LC K + C FLH+Y+ +MP C FF +GEC +C + H N + KE
Sbjct: 50 KAVVCKHWLRGLCKKNEKCEFLHEYNLKKMPECWFFSKYGECSNIECHFLHIDPNSESKE 109
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C YK GFC +G CR +HVK
Sbjct: 110 CLWYKRGFCRHGLMCRNKHVK 130
>gi|341884151|gb|EGT40086.1| hypothetical protein CAEBREN_24449 [Caenorhabditis brenneri]
gi|341893362|gb|EGT49297.1| hypothetical protein CAEBREN_21927 [Caenorhabditis brenneri]
Length = 312
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G P + P+ H G ++ VC+HWLR LC KGD C FLH+YD ++MP C FF +
Sbjct: 71 GCCPFGPTCPLRHIDGEKA---VVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYS 127
Query: 114 ECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
C ++C ++H + + +K+C Y GFC +GP C++RH
Sbjct: 128 ACSNRECPFRHIDPETKMKDCPWYDRGFCRHGPYCKHRH 166
>gi|221505163|gb|EEE30817.1| splicing factor yt521-B, putative [Toxoplasma gondii VEG]
Length = 496
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 19/148 (12%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FI++S N+E+++Q +WAT+ N+A L A + + V+L+FSVN T +F G A M
Sbjct: 54 RFFILRSRIAYNIEVAMQYNMWATRAHNDAVLGAALTACKYVVLLFSVNNTHYFCGWAVM 113
Query: 323 TSKIG-------------GSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNP 369
S+ G G GG ++ G+ F ++W++ L F + L NP
Sbjct: 114 RSRPGQCRFKSDLFRGAEGPHGGSQSRFE------GKTFDLEWIRKMPLDFRECEGLLNP 167
Query: 370 YNENLPVKISRDCQELEPSIGEQLAALL 397
N+NLPV +RD QE+ P++G + +
Sbjct: 168 LNQNLPVYRARDGQEVAPAVGRAVCGIF 195
>gi|308476985|ref|XP_003100707.1| CRE-CPSF-4 protein [Caenorhabditis remanei]
gi|308264519|gb|EFP08472.1| CRE-CPSF-4 protein [Caenorhabditis remanei]
Length = 310
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 5/99 (5%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G P + P+ H G ++ VC+HWLR LC KGD C FLH+YD ++MP C FF +
Sbjct: 71 GICPFGPTCPLRHIDGEKA---VVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYS 127
Query: 114 ECREQDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
C ++C ++H + + +K+C Y GFC +GP C++RH
Sbjct: 128 ACSNRECPFRHIDPETKMKDCPWYDRGFCRHGPYCKHRH 166
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS + P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 66 HTTPSPANFQPPKQ---LPTHPRDRERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 122
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y+ GFC GP C +H++
Sbjct: 123 WWYAKYGYCSAGDECLYAHPKERKIECPDYRRGFCKLGPTCPRKHIR 169
>gi|221060332|ref|XP_002260811.1| YT521-B-like family protein [Plasmodium knowlesi strain H]
gi|193810885|emb|CAQ42783.1| YT521-B-like family protein, putative [Plasmodium knowlesi strain
H]
Length = 612
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 86/168 (51%), Gaps = 2/168 (1%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+ FI+K +L LS+ GVWAT ++N K F ++ +FSVN + FQG AKM
Sbjct: 412 KIFIIKCNQISHLYLSILYGVWATGKNNTRKFINLFKENYTIVFLFSVNESGGFQGYAKM 471
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+ ++ W + G NF ++W+K+ ++ F R++RNP N+NLP+K SRD
Sbjct: 472 VTVPIKNLYENLW--GPISNRLGGNFRIQWIKIAKIDFDAFRNMRNPCNDNLPLKKSRDG 529
Query: 383 QELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGG 430
EL ++ + +Y P + +A ++ +R A +N G
Sbjct: 530 TELPLNLASIICNRIYALPSEDFLAGTIYEYKRRINHAAFFLNLHKQG 577
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 26/101 (25%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ---DCVYKHTNEDIKE- 131
+C H+++++CMK C +LHQ +++P C+ F C ++ C+++HT +++
Sbjct: 99 IICIHYIKNMCMKNLFCNYLHQLIYAKIPACKNFLKNNYCADKVRGSCMFRHTQDNVNSG 158
Query: 132 ----------------------CNMYKLGFCPNGPDCRYRH 150
C Y LGFC G +C+ H
Sbjct: 159 GFGESKDEHLDDVLKLLYDKNICVNYLLGFCNLGYNCKRVH 199
>gi|339245011|ref|XP_003378431.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
gi|316972658|gb|EFV56324.1| cleavage and polyadenylation specificity factor protein subunit 4
[Trichinella spiralis]
Length = 310
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H SG +S VC+HWLR LC KGD C FLH+YD S+MP C F+ + C ++C
Sbjct: 68 CPLRHVSGDKSI---VCKHWLRGLCKKGDQCEFLHEYDVSKMPECFFYSKYNACSNKECP 124
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
++H + +K+C Y GFC +GP C+ RH
Sbjct: 125 FRHIDPESKLKDCPWYDRGFCRHGPHCKNRH 155
>gi|345561432|gb|EGX44521.1| hypothetical protein AOL_s00188g189 [Arthrobotrys oligospora ATCC
24927]
Length = 332
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 3/103 (2%)
Query: 53 SGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLF 112
+G P+ + P H G VC+HWLR LC KGDAC FLH+Y+ RMP C F +
Sbjct: 127 AGHCPNGNACPDRHTVGTAGLNNLVCKHWLRGLCKKGDACDFLHEYNLRRMPECSFLIRY 186
Query: 113 GECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
G C+ DC+Y H + + + C Y+ GFCP GP C +HV+
Sbjct: 187 GYCQNGDDCLYFHPDPENRTSLCPHYENGFCPLGPTCAKKHVR 229
>gi|169805996|ref|XP_001827743.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
gi|161779029|gb|EDQ31055.1| cleavage and polyadenylation specificity factor, 30 kDa subunit
[Enterocytozoon bieneusi H348]
Length = 181
Score = 90.9 bits (224), Expect = 2e-15, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNED--IKECNM 134
VC+HWLR LC K + C +LH+Y +MP C FF ++G C +C++ H D ++EC
Sbjct: 61 VCKHWLRGLCKKNEKCDYLHEYILKKMPECFFFNVYGVCNNNECMFLHVKPDSKVRECVW 120
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC NG C+ +H++
Sbjct: 121 YTRGFCRNGAQCKNKHIR 138
>gi|89266751|emb|CAJ83570.1| novel protein similar to cpsf4 [Xenopus (Silurana) tropicalis]
Length = 279
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPN----------GPDCRYRHVK 152
+ H + IK+C Y GFC + GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHVALNLYYVFSGPLCRHRHTR 154
>gi|68074313|ref|XP_679071.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499725|emb|CAH98732.1| conserved hypothetical protein [Plasmodium berghei]
Length = 528
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 2/172 (1%)
Query: 245 GLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+P N + P+ + F++K +L LS+ GVWAT ++N K F +
Sbjct: 310 NIPEVYNLDNIPVASDKIKVFVIKCNQISHLYLSILYGVWATGKNNTRKYVNFFKENYTI 369
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
I +FSVN + FQG AKM + ++ W T G NF V+W+K+ ++ F +
Sbjct: 370 IFLFSVNESGGFQGYAKMITLPVKNLYENLW--GPITKRLGGNFRVQWIKIAKIDFDVFK 427
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
++ NPYN+NLP+K SRD EL +I + ++ P+ + +A ++ +R
Sbjct: 428 NITNPYNDNLPLKKSRDGTELPLNIASIICNKIHALPNEDFLAGTIYEYKRR 479
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ--- 118
+ G+ S +C H+++++CMK C +LHQ R+P C+ + + C ++
Sbjct: 30 VDIKQKKGKHS---IICIHYIKNMCMKNLFCNYLHQLIYDRIPPCKNYIKYNYCADKIRG 86
Query: 119 DCVYKHT---------NEDIKE--------------CNMYKLGFCPNGPDCRYRH 150
C+++HT NE+ +E C Y LGFC G +CR H
Sbjct: 87 SCMFRHTLENTNMNYYNENKEEHLDEALKFLHEKNICVNYLLGFCNLGYNCRKTH 141
>gi|327288274|ref|XP_003228853.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Anolis carolinensis]
Length = 278
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 14/102 (13%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ +GEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKYGECSNKECP 111
Query: 122 YKHTNED--IKECNMYKLGFCPN---------GPDCRYRHVK 152
+ H + + IK+C Y GFC + GP CR+RH +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHVFLAIVYLAGPLCRHRHTR 153
>gi|388579009|gb|EIM19339.1| hypothetical protein WALSEDRAFT_61516 [Wallemia sebi CBS 633.66]
Length = 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 60/93 (64%), Gaps = 3/93 (3%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCV 121
P+P + R TVC+HWLR LC KGDAC FLH+YD +MP C +F +G C ++C+
Sbjct: 26 PLPTNLRERERAVTVCKHWLRGLCKKGDACEFLHEYDLRKMPECWWFVKWGWCANGEECL 85
Query: 122 YKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
Y+HT+ + + EC Y GFC GP C ++H++
Sbjct: 86 YRHTSLEGRKNECPEYLRGFCRRGPYCPFKHIR 118
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS+ P +P H R TVC+HWLR LC KGD C FLH+Y+ RMP C
Sbjct: 69 HTTPSTQNFQPPKQ---LPTHPRERERLSTVCKHWLRGLCKKGDQCEFLHEYNLRRMPEC 125
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 126 WWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVR 172
>gi|5931741|emb|CAB56623.1| zinc finger protein [Rattus norvegicus]
Length = 229
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 54 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 110
Query: 122 YKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ H + + IK+C Y GFC +GP ++RH +
Sbjct: 111 FLHIDPESKIKDCPWYDRGFCKHGPL-QHRHTR 142
>gi|363749863|ref|XP_003645149.1| hypothetical protein Ecym_2619 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888782|gb|AET38332.1| Hypothetical protein Ecym_2619 [Eremothecium cymbalariae
DBVPG#7215]
Length = 209
Score = 90.1 bits (222), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHT--NEDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H N I+E
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFTKNGYCTQSPECQYLHIDPNSKIQE 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C YK+GFCP GP C +HVK
Sbjct: 124 CEDYKMGFCPLGPSCTRKHVK 144
>gi|148702476|gb|EDL34423.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_e [Mus
musculus]
Length = 153
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 55/93 (59%), Gaps = 6/93 (6%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C+
Sbjct: 3 CPLRHEQGEKL---VVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECL 59
Query: 122 YKHTNEDIK--ECNMYKLGFCPN-GPDCRYRHV 151
+ H +K +C Y GFC GP C+YRHV
Sbjct: 60 FLHLKPVLKLQDCPWYNQGFCKEVGPLCKYRHV 92
>gi|71986234|ref|NP_001023126.1| Protein CPSF-4 [Caenorhabditis elegans]
gi|33589141|emb|CAE45045.1| Protein CPSF-4 [Caenorhabditis elegans]
Length = 302
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 59/92 (64%), Gaps = 5/92 (5%)
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDC 120
+ P+ H G ++ VC+HWLR LC KGD C FLH+YD ++MP C FF + C ++C
Sbjct: 68 TCPLRHIDGEKA---VVCKHWLRGLCKKGDQCEFLHEYDLTKMPECFFFSKYSACSNREC 124
Query: 121 VYKHTNED--IKECNMYKLGFCPNGPDCRYRH 150
++H + + +K+C Y GFC +GP C++RH
Sbjct: 125 PFRHIDPETKMKDCPWYDRGFCRHGPYCKHRH 156
>gi|393912029|gb|EJD76558.1| hypothetical protein LOAG_16507 [Loa loa]
Length = 292
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G ++ VC+HWLR LC KGD C FLH+YD S+MP C FF + C ++C
Sbjct: 76 CPLRHIVGDKA---VVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECP 132
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
++H + IK+C Y GFC +GP C++RH
Sbjct: 133 FRHIDPESKIKDCPWYDRGFCRHGPFCKHRH 163
>gi|82914995|ref|XP_728928.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485611|gb|EAA20493.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 581
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 90/172 (52%), Gaps = 2/172 (1%)
Query: 245 GLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+P N + +P+ + F++K +L LS+ GVWAT ++N K F +
Sbjct: 363 NIPEVYNLDNSPVISDKIKVFVIKCNQISHLYLSILYGVWATGKNNTRKYVNFFKENYTI 422
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
I +FSVN + FQG AKM + ++ W T G NF V+W+K+ ++ F +
Sbjct: 423 IFLFSVNESGGFQGYAKMITLPVKNLYENLW--GPITKRLGGNFRVQWIKIAKIDFDVFK 480
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
++ NPYN+NLP+K SRD EL +I + ++ P+ + +A ++ +R
Sbjct: 481 NITNPYNDNLPLKKSRDGTELPLNIASIICNKIHALPNEDFLAGTIYEYKRR 532
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 29/115 (25%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ--- 118
+ G+ S +C H+++++CMK C +LHQ R+P C+ + + C ++
Sbjct: 86 VDIKQKKGKHS---IICIHYIKNMCMKNLFCNYLHQLIYDRIPPCKNYIKYNYCADKIRG 142
Query: 119 DCVYKHT---------NEDIKE--------------CNMYKLGFCPNGPDCRYRH 150
C+++HT NE+ +E C Y LGFC G +CR H
Sbjct: 143 SCMFRHTLENTNMNYYNENKEEHLDEALKFLHEKNICVNYLLGFCNLGYNCRKIH 197
>gi|403333836|gb|EJY66044.1| hypothetical protein OXYTRI_13791 [Oxytricha trifallax]
Length = 317
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 119/276 (43%), Gaps = 65/276 (23%)
Query: 131 ECNMYKLGFCPNGPDCRYRHVKLPGP--PPSVEEVLQKIQQISSYNHGNPNKHFQQRGAF 188
EC+ Y GFC GP+C Y H+K P P ++E Q IQ++ K+FQ G
Sbjct: 4 ECHDYNQGFCFEGPNCPYLHIKKPETQRPKKIQE--QYIQKMY--------KYFQNDGM- 52
Query: 189 SHQTDKSQFSQGPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPN 248
T+ + N+V K ++S N+
Sbjct: 53 ---TNSFLLLELLNSV---LIDKLQDSQSINMS--------------------------- 79
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
+VKS + E+LE+S VWAT KL AF +A++VILIF
Sbjct: 80 -----------------LVKSFSPESLEISQTHQVWATSPGPTKKLTNAFKTADHVILIF 122
Query: 309 SVNRTRHFQGCAKMTSKIGGSVGGGNWKYA-HGTAHYGRNFSVKWLKLCELSFHKTRHL- 366
SVN +R FQG A M S+ + ++ + + NF V+W+ + F +
Sbjct: 123 SVNESRSFQGFALMESEPDMNYKKEFFQSDPNSMIQFAGNFKVRWIIQGDYQFKDLEYFP 182
Query: 367 RNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPD 402
NP NE LP+K S++ QEL +G L+ LLY + D
Sbjct: 183 PNPMNEMLPIKQSKNGQELPFKLGNYLSYLLYNQKD 218
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS P +P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 64 HTTPSVQNFQPPKQ---LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 120
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y GFC GP+C +HV+
Sbjct: 121 WWYAKYGYCSAGDECLYAHPKERKVECPDYNRGFCRLGPNCPRKHVR 167
>gi|401825077|ref|XP_003886634.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
gi|395459779|gb|AFM97653.1| cleavage and polyadenylation specificity factor subunit Clipper
[Encephalitozoon hellem ATCC 50504]
Length = 176
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHT--NEDIKECN 133
VC+HWLR LC KG C F+H+YD SRMP C FF +GEC +C Y H N KEC
Sbjct: 50 VVCKHWLRGLCKKGIKCEFMHEYDLSRMPECYFFSSYGECMNPECNYIHIDPNSSSKECP 109
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFC NG C+ +HV+
Sbjct: 110 WYNRGFCRNGASCKNKHVR 128
>gi|74145512|dbj|BAE36185.1| unnamed protein product [Mus musculus]
gi|148702472|gb|EDL34419.1| DNA segment, Chr 11, ERATO Doi 636, expressed, isoform CRA_a [Mus
musculus]
Length = 160
Score = 89.4 bits (220), Expect = 6e-15, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P+ H G + VC+HWLR LC K D C FLHQYD S+MPVC F FG C ++C++
Sbjct: 56 PLRHEQGEK---LVVCKHWLRGLCRKSDCCDFLHQYDVSKMPVCYFHSKFGNCSNKECLF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNGPDCRYR 149
H +K +C Y GFC G R R
Sbjct: 113 LHLKPVLKLQDCPWYNQGFCKEGKSLRDR 141
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor
FP-101664 SS1]
Length = 280
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 64 VPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVY 122
+P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C ++ +G C D C+Y
Sbjct: 77 LPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKYGYCSAGDECLY 136
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
H E EC Y GFC GP C +HV+
Sbjct: 137 AHPKERRVECPDYNRGFCKLGPTCPRKHVR 166
>gi|393247657|gb|EJD55164.1| hypothetical protein AURDEDRAFT_78116 [Auricularia delicata
TFB-10046 SS5]
Length = 308
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS P A P H R TVC+HWLR LC KGDAC FLH+Y+ RMP C
Sbjct: 72 HTDPSPLNFQPPKAP---PVHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC 128
Query: 107 RFFRLFGECREQD-CVYKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
++ +G C D C+Y H E EC Y GFC GP C +HV+
Sbjct: 129 WWYAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPICPRKHVR 175
>gi|427781871|gb|JAA56387.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 501
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 106/208 (50%), Gaps = 9/208 (4%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-VILIFSVNRTRHF 316
P+G +R+FI+KS + +++ S++ +W + +L+ A+ A+ V+L FSVN + HF
Sbjct: 287 PKG-ARFFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRDAQGPVLLFFSVNGSGHF 345
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M S + + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 346 CGMAEMVSPVDYTASSSVW----AQDKWKGQFRVRWVYVKDVPNSQLRHIRLENNENKPV 401
Query: 377 KISRDCQELEPSIGEQLAALLY-LEPDSELMAISVAAEAKREEEKAKGV--NPDNGGDNP 433
SRD QE+ P G Q+ +L+ + + + E ++EE++ + P G P
Sbjct: 402 TNSRDTQEVPPDKGRQVLKILHGFRHTTSIFDDFLHYEKRQEEDEQREFPSVPAGGPAEP 461
Query: 434 DIVPFEDNEEEEEEESEEEEESLGTASQ 461
++P D+ + E + ++ + T++
Sbjct: 462 GLLPNLDHLKAAEAMKDNKQMPMPTSNH 489
>gi|164659544|ref|XP_001730896.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
gi|159104794|gb|EDP43682.1| hypothetical protein MGL_1895 [Malassezia globosa CBS 7966]
Length = 197
Score = 89.0 bits (219), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 61 SAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD- 119
S +P R R+TVC+HWLR LC KGD C +LH+YD RMP CRF+ FG C D
Sbjct: 110 SPAIPTSQSRDVSRRTVCKHWLRGLCKKGDLCDYLHEYDLRRMPECRFYATFGFCNSSDE 169
Query: 120 CVYKHTNEDIK--ECNMYKLGFCPNG 143
C+Y H + +K C Y+ GFC G
Sbjct: 170 CLYIHIDPSVKRRRCERYERGFCELG 195
>gi|448091693|ref|XP_004197393.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|448096266|ref|XP_004198424.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|359378815|emb|CCE85074.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
gi|359379846|emb|CCE84043.1| Piso0_004645 [Millerozyma farinosa CBS 7064]
Length = 216
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 49 APSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRF 108
PS+ + P+ P H S S + VC+HWLR LC K D C FLH+Y+ +MP C F
Sbjct: 42 VPSNPNSCPNGNDCPNKHVSSMYS-NKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLF 100
Query: 109 FRLFGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ G C + +C+Y H + I EC Y+ GFCP+GP C RHV+
Sbjct: 101 YSKNGFCTQTPECLYLHVDPQSKIPECPNYERGFCPDGPKCVNRHVR 147
>gi|401405797|ref|XP_003882348.1| hypothetical protein NCLIV_021030 [Neospora caninum Liverpool]
gi|325116763|emb|CBZ52316.1| hypothetical protein NCLIV_021030 [Neospora caninum Liverpool]
Length = 477
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 86/164 (52%), Gaps = 12/164 (7%)
Query: 246 LPNQTNRNATPLPQGI-----SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 300
LP+ T+ T Q I R+FI++S N+E+++Q +WAT+ N+A L A S
Sbjct: 32 LPSYTSGPPTSYAQTIYEEDNVRFFILRSRIAYNIEVAMQYNMWATRPHNDAILGAALKS 91
Query: 301 AENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGN-WKYAHG------TAHYGRNFSVKWL 353
+ V+L+FSVN T +F G A M S G + +K A + G F ++W+
Sbjct: 92 CKYVVLLFSVNNTHYFCGWAIMRSLPGHCRFKSDLFKAAEDPRGMSQSRFEGNTFEIEWI 151
Query: 354 KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ L F + L N N+NLPV +RD QE+ P++G + +L
Sbjct: 152 RRMPLDFKECEGLLNSLNQNLPVYRARDGQEVAPAVGRAVCSLF 195
>gi|47211970|emb|CAF95292.1| unnamed protein product [Tetraodon nigroviridis]
Length = 291
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 33/123 (26%)
Query: 60 ASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLF------- 112
A P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ F
Sbjct: 53 AMCPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGWSILHF 109
Query: 113 ---------------------GECREQDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYR 149
GEC ++C + H + IK+C Y GFC +GPDCR+R
Sbjct: 110 LFKSDRICTAGVVLMFCVCVAGECSNKECPFLHIDPESKIKDCPWYDRGFCKHGPDCRHR 169
Query: 150 HVK 152
H +
Sbjct: 170 HTR 172
>gi|260813525|ref|XP_002601468.1| hypothetical protein BRAFLDRAFT_245873 [Branchiostoma floridae]
gi|229286764|gb|EEN57480.1| hypothetical protein BRAFLDRAFT_245873 [Branchiostoma floridae]
Length = 559
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 85/162 (52%), Gaps = 8/162 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
SR+F++KS + +++ S++ +W + +L++AF + + L FSVN + HF G
Sbjct: 391 SRFFVIKSYSEDDIHRSIKYHIWCSTEHGNKRLDQAFRERKGKGPIYLFFSVNGSGHFCG 450
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S++ + G W + VKW+ + ++ + RH+R NEN PV
Sbjct: 451 VAQMMSEVDYNADTGVWS----QEKWKGKLEVKWIFVKDVPNSQLRHIRLENNENKPVTN 506
Query: 379 SRDCQELEPSIGEQLAALLY-LEPDSELMAISVAAEAKREEE 419
SRD QE+ P G+Q+ +L + + + V E ++EEE
Sbjct: 507 SRDTQEVPPEKGKQVLKILSNYKHTTSIFDDFVHYEKRQEEE 548
>gi|312069897|ref|XP_003137896.1| hypothetical protein LOAG_02310 [Loa loa]
Length = 222
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 5/91 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G ++ VC+HWLR LC KGD C FLH+YD S+MP C FF + C ++C
Sbjct: 76 CPLRHIVGDKA---VVCKHWLRGLCKKGDQCEFLHEYDLSKMPECFFFSKYMACSNRECP 132
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRH 150
++H + IK+C Y GFC +GP C++RH
Sbjct: 133 FRHIDPESKIKDCPWYDRGFCRHGPFCKHRH 163
>gi|68068567|ref|XP_676194.1| rat BRAIN protein-like [Plasmodium berghei strain ANKA]
gi|56495775|emb|CAH99074.1| rat BRAIN protein-like, putative [Plasmodium berghei]
Length = 239
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%)
Query: 282 GVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGT 341
+WAT NE K AF + VIL+FSVN + F G A M SK G S + Y
Sbjct: 4 NIWATTPKNENKFLTAFIENDYVILVFSVNESSKFCGYAIMRSKPGESKNSNVYFYYDDK 63
Query: 342 AHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
G+NF ++W+++ ++ FH+ HL+N N+N +K+ RD QE+E G +L +
Sbjct: 64 IFRGKNFDIQWIRIVDVFFHEVTHLKNSLNDNKLIKVGRDGQEIEQMAGMKLCDIF 119
>gi|326437098|gb|EGD82668.1| mRNA 3'-end-processing protein yth1 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 51/82 (62%), Gaps = 3/82 (3%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNED--IK 130
R VC+HW+ LC KGD C FLH YD S+MP C FFR G C + +DC++ H + +
Sbjct: 64 RNVVCKHWINGLCRKGDNCDFLHIYDLSKMPECHFFRNDGHCEKGKDCLFLHITPEQRRR 123
Query: 131 ECNMYKLGFCPNGPDCRYRHVK 152
+C Y GFC NG +CR RH K
Sbjct: 124 DCAWYWRGFCKNGANCRLRHRK 145
>gi|346972208|gb|EGY15660.1| mRNA 3'-end-processing protein YTH1 [Verticillium dahliae VdLs.17]
Length = 395
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 18 AGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSGRRSFRQTV 77
A P + + + PA D T A +A AA S+ G P H H+GR V
Sbjct: 153 AAPDLASHTEPAATFDFTPFLRATHQHAL-AADSAPGGQPAHT------HAGRGP--SLV 203
Query: 78 CRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECNM 134
C+HWLR LC KG C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 204 CKHWLRGLCKKGAHCEFLHEYNLRKMPECNFFTRNGYCSNGEECLYLHIDPQSKLPPCPH 263
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 264 YDMGFCPLGPACAKKHVR 281
>gi|343423882|emb|CCD18022.1| hypothetical protein, conserved in T. vivax [Trypanosoma vivax
Y486]
Length = 276
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 53 SGAAPDHASAPVPH-HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL 111
SG + ++ P H S ++ R VC+HWLR C+ G+ C +LH+YD +P C F++
Sbjct: 36 SGKCRNGSACPERHVLSQFKTMRLEVCKHWLRGACVNGENCIYLHEYDDRYVPACAFYQR 95
Query: 112 FGECREQDCVYKHT--NEDIKECNMYKLGFCPNGPDCRYRHV 151
GEC +C ++H E+ EC Y+ GFCP GP CR RHV
Sbjct: 96 LGECSNPECPFQHVIQVENQAECAAYRRGFCPQGPRCRLRHV 137
>gi|149248224|ref|XP_001528499.1| protein YTH1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146448453|gb|EDK42841.1| protein YTH1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 211
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 67/111 (60%), Gaps = 8/111 (7%)
Query: 46 NHAAPSSSGAAPDHASAPVPHHSGRRSFR-QTVCRHWLRSLCMKGDACGFLHQYDKSRMP 104
NH P++S P+ + P H S ++F+ + VC+HWLR LC KGD C FLH+Y+ +MP
Sbjct: 42 NHQFPTTS--CPNGTNCPNKHPS--QTFKNKLVCKHWLRGLCKKGDNCEFLHEYNLRKMP 97
Query: 105 VCRFFRLFGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C F+ G C + +C+Y H + I EC Y GFC GP+C+ RHV+
Sbjct: 98 ECVFYSKNGYCTQTPECLYLHIDPQSKIPECMNYNAGFCLEGPNCKNRHVR 148
>gi|344243027|gb|EGV99130.1| Cleavage and polyadenylation specificity factor subunit 4
[Cricetulus griseus]
Length = 274
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECP 111
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYR 149
+ H + IK+C Y GFC + C +
Sbjct: 112 FLHIDPESKIKDCPWYDRGFCKHVSPCVLK 141
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=Clipper homolog; AltName:
Full=Clipper/CPSF 30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FG C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGP----LCR 107
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVE 161
++HT I C Y +GFCP GP C++ H + P + E
Sbjct: 108 HRHTRRVI--CVNYLVGFCPEGPSCKFMHPRFELPMGTTE 145
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FG C
Sbjct: 55 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGP----LCR 107
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVE 161
++HT I C Y +GFCP GP C++ H + P + E
Sbjct: 108 HRHTRRVI--CVNYLVGFCPEGPSCKFMHPRFELPMGTTE 145
>gi|255724604|ref|XP_002547231.1| protein YTH1 [Candida tropicalis MYA-3404]
gi|240135122|gb|EER34676.1| protein YTH1 [Candida tropicalis MYA-3404]
Length = 207
Score = 87.4 bits (215), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
+ P + P H S S + VC+HWLR LC KGD C FLH+Y+ +MP C F+ G
Sbjct: 49 SCPQGNNCPNKHVSAMYS-NKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGY 107
Query: 115 CRE-QDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + +C+Y H + I EC Y GFC +GP+C+ RHV+
Sbjct: 108 CTQTSECLYLHVDPQSKIPECVNYNQGFCSDGPNCKNRHVR 148
>gi|397588103|gb|EJK54143.1| hypothetical protein THAOC_26293, partial [Thalassiosira oceanica]
Length = 134
Score = 87.4 bits (215), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/70 (58%), Positives = 47/70 (67%), Gaps = 6/70 (8%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE-CREQDCVYKHTNE-DIK 130
R VCRHWLR LCMKG AC FLHQYD S+MP+CR GE C+ +DC ++H NE D
Sbjct: 67 LRTVVCRHWLRDLCMKGAACEFLHQYDLSKMPLCR----HGERCKVRDCPFRHINEADRL 122
Query: 131 ECNMYKLGFC 140
EC Y GFC
Sbjct: 123 ECVFYSQGFC 132
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIKE 131
FR TVC+HWLR LC KG++C FLH+Y+ +MP C ++ +G C D C+Y H E +
Sbjct: 114 FRTTVCKHWLRGLCKKGESCEFLHEYNLRKMPECWWYAKYGYCSAGDECLYTHPKERKID 173
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFCP GP C +H +
Sbjct: 174 CPDYARGFCPLGPKCERKHAR 194
>gi|358391136|gb|EHK40540.1| hypothetical protein TRIATDRAFT_226343 [Trichoderma atroviride IMI
206040]
Length = 244
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 89/176 (50%), Gaps = 23/176 (13%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F+VKS N N+E++ + G+W T+ N L+ AF + V LIFS+N+++ FQG A+
Sbjct: 35 ARFFLVKSFNSMNVEMAQRDGLWITKAENGPMLSFAFKQCKTVYLIFSINKSKAFQGYAR 94
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
MT+ ++ W ++ + F ++WL +F L+N +N++ PV + RD
Sbjct: 95 MTTAPDPNIAPAKW-MSNISWKASHPFRIEWLNTRRTAFWTLGDLKNAFNDHAPVFVGRD 153
Query: 382 CQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVP 437
QE G ++ +L DS L EE K+ GGD+P P
Sbjct: 154 GQEYPEDCGRKILEVL----DSSL-----------EETKS-------GGDSPKAAP 187
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FG C
Sbjct: 79 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGP----LCR 131
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVE 161
++HT I C Y +GFCP GP C++ H + P + E
Sbjct: 132 HRHTRRVI--CVNYLVGFCPEGPSCKFMHPRFELPMGTTE 169
>gi|146423357|ref|XP_001487608.1| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC
6260]
Length = 199
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
Query: 50 PSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFF 109
PS+ G+ P+ + P H S + VC+HWLR LC K D C FLH+Y+ +MP C F+
Sbjct: 43 PSTPGSCPNGNNCPNKHVPTMYS-NKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFY 101
Query: 110 RLFGECREQ-DCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
G C + +C+Y H + +K C Y+ GFCP GP C RHV+
Sbjct: 102 SKNGFCTQTPECLYLHVDPQLKIPACPNYEKGFCPEGPKCPNRHVR 147
>gi|119609527|gb|EAW89121.1| hCG1641439 [Homo sapiens]
Length = 143
Score = 87.0 bits (214), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVY 122
P H G + VC+HWLR LC KGD C FLHQYD +RMP C F+ FG+C ++C +
Sbjct: 56 PFRHDRGEK---MVVCKHWLRGLCKKGDHCKFLHQYDLTRMPECYFYSKFGDCSNKECSF 112
Query: 123 KHTNEDIK--ECNMYKLGFCPNG 143
H K +C Y GFC +G
Sbjct: 113 LHVKPAFKSQDCPWYDQGFCKDG 135
>gi|50310851|ref|XP_455448.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605283|sp|Q6CKU1.1|YTH1_KLULA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49644584|emb|CAG98156.1| KLLA0F08129p [Kluyveromyces lactis]
Length = 210
Score = 86.7 bits (213), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTNE--DIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H + ++E
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFTKNGYCTQSPECQYLHVDHKSQLEE 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y +GFCP+GP C +HVK
Sbjct: 124 CEDYNMGFCPSGPACTKKHVK 144
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHT 125
H + + VC+HWLR LC KGD C FLH+Y+ +MP C F+ G C + +C+Y+H
Sbjct: 60 HVSQMYSNKVVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQGSECLYQHI 119
Query: 126 N--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ I EC Y GFC GP+C+ RHV+
Sbjct: 120 DPQSKIPECMNYNAGFCAEGPNCKSRHVR 148
>gi|260951253|ref|XP_002619923.1| hypothetical protein CLUG_01082 [Clavispora lusitaniae ATCC 42720]
gi|238847495|gb|EEQ36959.1| hypothetical protein CLUG_01082 [Clavispora lusitaniae ATCC 42720]
Length = 149
Score = 86.7 bits (213), Expect = 5e-14, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C FLH+Y+ +MP C F+ G C + +C+Y H + + I E
Sbjct: 5 KIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGYCTQTPECLYLHIDPQQKIPE 64
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C+ Y+ GFCP GP C RH++
Sbjct: 65 CSQYEKGFCPEGPKCPNRHIR 85
>gi|427781873|gb|JAA56388.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 489
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 7/167 (4%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-VILIFSVNRTRHF 316
P+G +R+FI+KS + +++ S++ +W + +L+ A+ A+ V+L FSVN + HF
Sbjct: 287 PKG-ARFFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRDAQGPVLLFFSVNGSGHF 345
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M S + + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 346 CGMAEMVSPVDYTASSSVW----AQDKWKGQFRVRWVYVKDVPNSQLRHIRLENNENKPV 401
Query: 377 KISRDCQELEPSIGEQLAALLY-LEPDSELMAISVAAEAKREEEKAK 422
SRD QE+ P G Q+ +L+ + + + E ++EE++ +
Sbjct: 402 TNSRDTQEVPPDKGRQVLKILHGFRHTTSIFDDFLHYEKRQEEDEQR 448
>gi|343470800|emb|CCD16609.1| unnamed protein product [Trypanosoma congolense IL3000]
gi|343470954|emb|CCD16504.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 277
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 48 AAPSSSGAAPDHASAPVPH-HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
P G A+ P H S ++ R VC+HWLR C+ G+ C +LH+YD +P C
Sbjct: 31 CQPFQHGKCRHGAACPERHVLSQFKTMRLEVCKHWLRGACVNGENCVYLHEYDDRYVPAC 90
Query: 107 RFFRLFGECREQDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHV 151
F++ GEC +C ++H + + EC Y+ GFCP GP CR RHV
Sbjct: 91 AFYQRLGECSNPECPFQHVVQVERQPECAAYRRGFCPMGPKCRLRHV 137
>gi|19113874|ref|NP_592962.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe 972h-]
gi|74625941|sp|Q9UTD1.1|YTH1_SCHPO RecName: Full=mRNA 3'-end-processing protein yth1
gi|6455911|emb|CAB61457.1| mRNA cleavage and polyadenylation specificity factor complex Yth1
[Schizosaccharomyces pombe]
Length = 170
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKEC 132
VC+HWLR LC KG+ C FLH+Y+ +MP C F+ G C ++C+Y H + + + C
Sbjct: 52 VVCKHWLRGLCKKGEQCDFLHEYNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQVGVC 111
Query: 133 NMYKLGFCPNGPDCRYRHVKLPGPPP 158
Y +GFCP GP CR +HV+ P P P
Sbjct: 112 AWYNMGFCPLGPICRGKHVRKPRPCP 137
>gi|399219146|emb|CCF76033.1| unnamed protein product [Babesia microti strain RI]
Length = 242
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+YF++KS N +N+ + + WAT N ++A D V LIFSVN + F G ++M
Sbjct: 2 KYFLIKSYNEDNITTAYRNSCWATSERNAVTFSQALDKGP-VTLIFSVNGSSKFCGYSRM 60
Query: 323 TSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
+K G S+ +K G + F ++W+ ++ F T H+ N N N P+KI RD
Sbjct: 61 LNKPGQSIKVDIFKAPDGNLLKWKIFDIQWVFYGDVHFSATEHIVNSLNFNKPLKIGRDG 120
Query: 383 QELEPSIGEQLAALL 397
QE++P +QL L
Sbjct: 121 QEIDPFAAQQLIDLF 135
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P H SG ++ VC+HWLR LC KGD C FLH+YD ++MP C F+ FG C
Sbjct: 23 CPFRHISGEKT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGP----LCR 75
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVE 161
++HT I C Y +GFCP GP C++ H + P + E
Sbjct: 76 HRHTRRVI--CVNYLVGFCPEGPSCKFMHPRFELPMGTTE 113
>gi|71404274|ref|XP_804858.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma cruzi strain CL Brener]
gi|50363267|gb|AAT75336.1| cleavage polyadenylation specificity factor CPSF30 [Trypanosoma
cruzi]
gi|70868032|gb|EAN83007.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
++ R VC+HWLR C+ G+ C +LH+YD +P+C F++ GEC +C ++H + K
Sbjct: 55 KTMRLEVCKHWLRGACVNGENCLYLHEYDDRYVPLCAFYQRLGECTNPECPFQHVIQVEK 114
Query: 131 --ECNMYKLGFCPNGPDCRYRHVKLPGPP 157
EC Y+ GFCP GP C RHV P P
Sbjct: 115 QPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
>gi|378727782|gb|EHY54241.1| hypothetical protein HMPREF1120_02412 [Exophiala dermatitidis
NIH/UT8656]
Length = 243
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 20 PGMPTAS---NPAIQSDSTAAAAAAA-ANANHAAPSSS---GAAPDHASAP--VPHHSGR 70
P PT + P ++++ AA A+ A++AA PD P P H
Sbjct: 22 PAYPTYNFSFTPFLRANGLAALASTVPVCADYAATGHCPRGRRCPDRHPTPGEPPQHHYG 81
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDI 129
R+ VC+HWL+ LC KGD C +LH+Y+ +M C+FF G C+ D C+Y H ED
Sbjct: 82 RNNDNYVCKHWLKGLCKKGDTCDYLHEYNLRKMSECQFFNQNGYCQNGDECLYVHVKEDS 141
Query: 130 K--ECNMYKLGFCPNGPDCRYRHVK 152
K C Y GFC GP C RHV+
Sbjct: 142 KLPLCEDYNRGFCEKGPRCGKRHVR 166
>gi|71648901|ref|XP_813230.1| cleavage and polyadenylation specificity factor 30 kDa subunit
[Trypanosoma cruzi strain CL Brener]
gi|70878095|gb|EAN91379.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
++ R VC+HWLR C+ G+ C +LH+YD +P+C F++ GEC +C ++H + K
Sbjct: 55 KTMRLEVCKHWLRGACVNGENCLYLHEYDDRYVPLCAFYQRLGECTNPECPFQHVIQVEK 114
Query: 131 --ECNMYKLGFCPNGPDCRYRHVKLPGPP 157
EC Y+ GFCP GP C RHV P P
Sbjct: 115 KPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
>gi|407846109|gb|EKG02435.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi]
Length = 271
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
++ R VC+HWLR C+ G+ C +LH+YD +P+C F++ GEC +C ++H + K
Sbjct: 55 KTMRLEVCKHWLRGACVNGENCLYLHEYDDRYVPLCAFYQRLGECTNPECPFQHVIQVEK 114
Query: 131 --ECNMYKLGFCPNGPDCRYRHVKLPGPP 157
EC Y+ GFCP GP C RHV P P
Sbjct: 115 RPECAAYRRGFCPLGPKCHLRHVFRPSCP 143
>gi|407404287|gb|EKF29805.1| cleavage and polyadenylation specificity factor 30 kDa subunit,
putative [Trypanosoma cruzi marinkellei]
Length = 271
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 61/111 (54%), Gaps = 3/111 (2%)
Query: 50 PSSSGAAPDHASAPVPH-HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRF 108
P G A+ P H S ++ R VC+HWLR C+ G+ C +LH+YD +P+C F
Sbjct: 33 PFQHGKCRHGAACPERHVISQFKTMRLEVCKHWLRGACVNGENCLYLHEYDDRYVPLCAF 92
Query: 109 FRLFGECREQDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVKLPGPP 157
++ GEC +C ++H + K EC Y+ GFCP GP C RHV P P
Sbjct: 93 YQRLGECTNPECPFQHVIKVEKQPECAAYRRGFCPLGPQCHLRHVFRPSCP 143
>gi|344303110|gb|EGW33384.1| hypothetical protein SPAPADRAFT_55266 [Spathaspora passalidarum
NRRL Y-27907]
Length = 216
Score = 85.9 bits (211), Expect = 6e-14, Method: Composition-based stats.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
+ P+ P H S S + VC+HWLR LC K D C FLH+Y+ +MP C FF G
Sbjct: 47 SCPNGNLCPNKHVSSMYS-NKIVCKHWLRGLCKKSDHCEFLHEYNLRKMPECLFFSKNGF 105
Query: 115 CREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + +C+Y H + I EC Y GFCP+GP+C+ RHV+
Sbjct: 106 CTQTPECLYLHIDPSSKIPECLNYNKGFCPDGPNCKNRHVR 146
>gi|449295145|gb|EMC91167.1| hypothetical protein BAUCODRAFT_570949 [Baudoinia compniacensis
UAMH 10762]
Length = 506
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 83/188 (44%), Gaps = 53/188 (28%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+Y+I+KS +LE SV+ G+WATQ NE LN AF AENV LIFS N++ + G A+M
Sbjct: 298 KYYILKSLTVSDLESSVRNGIWATQAHNEETLNRAFAHAENVYLIFSANKSGEYFGYARM 357
Query: 323 TSKIGGSVGGGNWKY-------------------------------AHGTAHYGRNFS-- 349
+S I G + + A GT + + S
Sbjct: 358 SSPISGELVNLSASVELDDATPAGTPQSIPTPATDTAPKGRIIDDSARGTIFWEADLSDD 417
Query: 350 ------------VKWLKLCELSFHKTRHL--------RNPYNENLPVKISRDCQELEPSI 389
+W + + + T L RNP+N N VKI+RD ELEPS+
Sbjct: 418 DTTPLTIGNREGQQWGRQFRVEWISTSRLPFFRIRGLRNPWNANREVKIARDGTELEPSV 477
Query: 390 GEQLAALL 397
G +L ++
Sbjct: 478 GRRLLSIF 485
>gi|320593669|gb|EFX06078.1| duf409 domain containing protein [Grosmannia clavigera kw1407]
Length = 636
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+F++KS N N+ ++ GVW TQ NE L AF NV+ FSVN++R FQG A+
Sbjct: 466 TRFFMLKSFNEGNVRRAMADGVWTTQLKNEELLVTAFKKCRNVVFFFSVNKSRAFQGYAR 525
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRN--FSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
M S S+ +W H+ F + W + HL N NE+ V I
Sbjct: 526 MESLPSASIVKPSWM---DNIHWQTTEPFRIAWYNTTTTDYRHVAHLENDLNEHRSVIIG 582
Query: 380 RDCQELEPSIGEQLAALLYLEPDSE 404
+D QE++ G +L L + D E
Sbjct: 583 KDGQEIDDECGRRLMEELDVTADGE 607
>gi|448512977|ref|XP_003866853.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
gi|380351191|emb|CCG21414.1| Yth1 mRNA cleavage and polyadenylation specificity factor [Candida
orthopsilosis Co 90-125]
Length = 216
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHT 125
H + + VC+HWLR LC KGD C FLH+Y+ +MP C F+ G C + +C+Y+H
Sbjct: 60 HVSQMYSNKVVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGFCTQGSECLYQHI 119
Query: 126 N--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ I EC Y GFC GP+C+ RHV+
Sbjct: 120 DPQSKIPECMNYNAGFCAEGPNCKNRHVR 148
>gi|145496127|ref|XP_001434055.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401177|emb|CAK66658.1| unnamed protein product [Paramecium tetraurelia]
Length = 502
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 246 LPNQTNRNATPLPQGI--SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 303
+ QT + T L Q I + +FIVKS +N+ L+ VWAT R N L + F++ +
Sbjct: 151 IKQQTEISNTELEQQIKNAVFFIVKSNTEQNVILAKTHDVWATTRRNFGTLMDQFNN-KK 209
Query: 304 VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYA-HGTAHYGRNFSVKWLKLCELSFHK 362
VILIF NR F GCAKM K W++ T NFS++WL+ + F K
Sbjct: 210 VILIFIANRVEKFLGCAKM--KNIQVPRDPKWQWCGTSTIQLADNFSIEWLRKGTVDFAK 267
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ NP +L ++ S+DCQE+ IG+++ L
Sbjct: 268 LQDTINPKTGDLVIR-SKDCQEVPADIGQRICLLF 301
>gi|190345069|gb|EDK36887.2| hypothetical protein PGUG_00985 [Meyerozyma guilliermondii ATCC
6260]
Length = 199
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 4/106 (3%)
Query: 50 PSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFF 109
PS+ G+ P+ + P H S + VC+HWLR LC K D C FLH+Y+ +MP C F+
Sbjct: 43 PSTPGSCPNGNNCPNKHVPTMYS-NKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFY 101
Query: 110 RLFGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
G C + +C+Y H + I C Y+ GFCP GP C RHV+
Sbjct: 102 SKNGFCTQTPECLYLHVDPQSKIPACPNYEKGFCPEGPKCPNRHVR 147
>gi|150864997|ref|XP_001384039.2| hypothetical protein PICST_27265 [Scheffersomyces stipitis CBS
6054]
gi|149386253|gb|ABN66010.2| cleavage and polyadenylation specificity factor, partial
[Scheffersomyces stipitis CBS 6054]
Length = 192
Score = 85.5 bits (210), Expect = 1e-13, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 49 APSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRF 108
PSS P+ +S P H S + + VC+HWLR LC K D C FLH+Y+ +MP C F
Sbjct: 46 GPSS---CPNGSSCPNKHVSSMYN-NKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLF 101
Query: 109 FRLFGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ G C + +C+Y H + I C Y+ GFCP+GP+C RHV+
Sbjct: 102 YSKNGFCTQTPECLYLHIDPQSKIPACPSYEKGFCPDGPNCTKRHVR 148
>gi|295669302|ref|XP_002795199.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285133|gb|EEH40699.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 817
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHF 316
L G YF++K E ++ + +G WATQ N K AF+++ +VILIFSVN++ F
Sbjct: 670 LAAGGVSYFLIKCLAYEMVDAA--KGTWATQPKNIEKFTNAFENSRHVILIFSVNQSGAF 727
Query: 317 QGCAKMTSKIGGS-VGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
QG A+M ++ G S V +W + + F + W F +L+NPYNE+
Sbjct: 728 QGYARMETQPGASGVAPPSWVKTLDMS-LSQPFKICWYNTVNTMFRHVGYLKNPYNEDHE 786
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V +RD QE+E G L +L
Sbjct: 787 VTYARDGQEIEGECGRILCEIL 808
>gi|241951540|ref|XP_002418492.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
gi|223641831|emb|CAX43793.1| mRNA 3'-end-processing protein, putative [Candida dubliniensis
CD36]
Length = 216
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 10 FDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSG 69
F FE P + N + D N +++ P + H SA +
Sbjct: 17 FKFE------PFLRQEYNFGLDPDRPVCQFYNPLNPDNSCPQGNNCPNKHVSAMYSN--- 67
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN-- 126
+ VC+HWLR LC KGD C FLH+Y+ +MP C F+ G C + +C+Y H +
Sbjct: 68 -----KIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGYCTQTSECLYLHVDPQ 122
Query: 127 EDIKECNMYKLGFCPNGPDCRYRHVK 152
I EC Y GFC GP+C+ RHV+
Sbjct: 123 SKIPECLNYNQGFCSEGPNCKNRHVR 148
>gi|68486577|ref|XP_712839.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|68486632|ref|XP_712810.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|74584839|sp|Q59T36.1|YTH1_CANAL RecName: Full=mRNA 3'-end-processing protein YTH1
gi|46434225|gb|EAK93641.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|46434255|gb|EAK93670.1| potential polyadenylation factor subunit [Candida albicans SC5314]
gi|238882336|gb|EEQ45974.1| protein YTH1 [Candida albicans WO-1]
Length = 215
Score = 85.1 bits (209), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 4/101 (3%)
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
+ P + P H S S + VC+HWLR LC KGD C FLH+Y+ +MP C F+ G
Sbjct: 49 SCPQGNNCPNKHVSAMYS-NKIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGY 107
Query: 115 CRE-QDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + +C+Y H + I EC Y GFC GP+C+ RHV+
Sbjct: 108 CTQTSECLYLHVDPQSKIPECLNYNQGFCSEGPNCKNRHVR 148
>gi|396472497|ref|XP_003839131.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
gi|312215700|emb|CBX95652.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G PD P HH S+ VC+HWLR LC KGD C FLH+Y+ RMP C ++
Sbjct: 54 GHCPDGNRCPNKHHVTS-SYNNLVCKHWLRGLCKKGDTCEFLHEYNLRRMPECSYYARTQ 112
Query: 114 ECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
C DC+Y H + + K C Y GFCP GP C +H K
Sbjct: 113 TCSNGDDCLYLHIDPEAKRPACPHYDRGFCPLGPHCALKHNK 154
>gi|255713144|ref|XP_002552854.1| KLTH0D02948p [Lachancea thermotolerans]
gi|238934234|emb|CAR22416.1| KLTH0D02948p [Lachancea thermotolerans CBS 6340]
Length = 210
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H N I+E
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPECQYLHINPSSKIQE 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C+ RH+K
Sbjct: 124 CEDYRMGFCPAGAQCKKRHIK 144
>gi|294656139|ref|XP_458388.2| DEHA2C16126p [Debaryomyces hansenii CBS767]
gi|218511904|sp|Q6BTT1.2|YTH1_DEBHA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|199430889|emb|CAG86470.2| DEHA2C16126p [Debaryomyces hansenii CBS767]
Length = 223
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 17/146 (11%)
Query: 10 FDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPHHSG 69
F FE P + N + D +N N++ P+ S H S+ +
Sbjct: 17 FKFE------PFLLKEYNFGLDPDRPVCQFYNPSNPNNSCPNGSLCPHKHVSSMYSN--- 67
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN-- 126
+ VC+HWLR LC K D C FLH+Y+ +MP C F+ G C + +C+Y H +
Sbjct: 68 -----KIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLFYSKNGFCTQTPECLYLHVDPQ 122
Query: 127 EDIKECNMYKLGFCPNGPDCRYRHVK 152
I C+ Y+ GFCP+GP C RH++
Sbjct: 123 SKIPPCSSYEKGFCPDGPKCANRHIR 148
>gi|242017002|ref|XP_002428983.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
gi|212513816|gb|EEB16245.1| ATP-dependent RNA helicase, putative [Pediculus humanus corporis]
Length = 1364
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
SRYF++K + + + S+ + W + E ++N A ++ V LIFSV + +FQG AK
Sbjct: 1201 SRYFVIKVHSLKAFDNSITKETWNFAPNTERRINRALKESKEVFLIFSVQGSGNFQGIAK 1260
Query: 322 MTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRD 381
+ + G V N ++WLK L F TRHL NP NEN V+ SRD
Sbjct: 1261 LVNMTDGPVVSCN------------QMPLQWLKRGNLPFQATRHLFNPLNENRRVQSSRD 1308
Query: 382 CQELEPSIGEQLAAL 396
QE+EPSIG L +L
Sbjct: 1309 GQEIEPSIGAALCSL 1323
>gi|254565579|ref|XP_002489900.1| Essential RNA-binding component of cleavage and polyadenylation
factor, contains five zinc fingers [Komagataella
pastoris GS115]
gi|238029696|emb|CAY67619.1| Essential RNA-binding component of cleavage and polyadenylation
factor, contains five zinc fingers [Komagataella
pastoris GS115]
gi|328350311|emb|CCA36711.1| mRNA 3'-end-processing protein YTH1 [Komagataella pastoris CBS
7435]
Length = 260
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 4/104 (3%)
Query: 52 SSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRL 111
+SG P+ + H S S + VC+HWLR LC KGD C FLH+Y+ ++P C FF
Sbjct: 53 TSGECPNGTNCENKHVSKMFS-NKIVCKHWLRGLCKKGDDCEFLHEYNFRKLPECVFFSK 111
Query: 112 FGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
G C + +C+Y H + + C Y+ GFCP+GP C RH++
Sbjct: 112 NGFCTQTPECLYLHIDPQTKVSNCPNYEQGFCPDGPKCSRRHIR 155
>gi|389641403|ref|XP_003718334.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|351640887|gb|EHA48750.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae 70-15]
gi|440470731|gb|ELQ39790.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae Y34]
gi|440487615|gb|ELQ67394.1| mRNA 3'-end-processing protein yth-1 [Magnaporthe oryzae P131]
Length = 276
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 68 SGRR---SFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYK 123
SG+R +F VC+HWLR LC KGD C FLH+Y+ RMP C F+ G C+ ++C+Y
Sbjct: 79 SGKRDGPAFNSLVCKHWLRGLCKKGDGCEFLHEYNLRRMPECNFYIRNGYCQNGEECLYL 138
Query: 124 HTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
H + + C Y GFCP GP C +HV+
Sbjct: 139 HIDPQSKLPPCPHYDQGFCPLGPRCSKKHVR 169
>gi|385301812|gb|EIF45975.1| protein yth1 [Dekkera bruxellensis AWRI1499]
Length = 270
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 51 SSSGAAPDHASAPVPHHSGRRSFR-QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFF 109
S+ P P+ H S + F+ + VC++WLR LC GD C FLH+Y+ S+MP C ++
Sbjct: 108 SNGTXCPYGRDCPLKHPS--KIFKNKIVCKYWLRGLCKMGDDCDFLHEYNLSKMPECAYY 165
Query: 110 RLFGECREQD-CVYKHTN--EDIKECNMYK-LGFCPNGPDCRYRHVK 152
G C + D C+Y H + I EC Y LGFCP GP C RHV+
Sbjct: 166 AANGVCLQADECIYLHVDPKSKIPECYNYSNLGFCPEGPKCPRRHVR 212
>gi|393211621|gb|EJC97472.1| hypothetical protein FOMMEDRAFT_137600 [Fomitiporia mediterranea
MF3/22]
Length = 248
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 64 VPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVY 122
V H R TVC+HWLR LC KGDAC FLH+Y+ RMP C ++ FG C+ D C+Y
Sbjct: 81 VSMHPRDRKRLATVCKHWLRGLCKKGDACEFLHEYNLRRMPECWWYAKFGYCQAGDECLY 140
Query: 123 KHTNEDIKECNMYKLGFCPNGPDCRYRHVKL 153
H E EC YK GFC G C + +V +
Sbjct: 141 AHPKEKKIECPDYKRGFCKLG-TCSFFNVNI 170
>gi|18490765|gb|AAH22697.1| Ythdc1 protein [Mus musculus]
Length = 350
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 285 ATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTA-- 342
+T NE KLN AF SA +VILIFSV + FQG A+++S+ +W G +
Sbjct: 1 STLPVNEKKLNLAFRSARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAK 60
Query: 343 HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPD 402
G F + W+ EL F K+ HL NP+NE+ PVKI RD QE+E G QL L +
Sbjct: 61 MLGGVFKIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFPPDES 120
Query: 403 SELMAISVAAEAKR 416
+L + KR
Sbjct: 121 IDLYQLIHKMRHKR 134
>gi|46108144|ref|XP_381130.1| hypothetical protein FG00954.1 [Gibberella zeae PH-1]
Length = 411
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 53 SGAAPDHASAPVPHHSGRRSFRQT------VCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
SG P+ P H S ++ + T VC+HWLR LC KG+ C FLH+Y+ +MP C
Sbjct: 204 SGHCPNGTRCPERHVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPEC 263
Query: 107 RFFRLFGECREQD-CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
FF G C D C+Y H + + C Y +GFCP GP+C +HV+
Sbjct: 264 NFFMRNGYCSNGDECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVR 312
>gi|406608109|emb|CCH40543.1| mRNA 3'-end-processing protein YTH1 [Wickerhamomyces ciferrii]
Length = 219
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC KGD C FLH+Y+ +MP C F+ G C + +C Y H + I E
Sbjct: 61 KIVCKHWLRGLCKKGDHCEFLHEYNLRKMPECLFYSKNGFCTQTPECQYLHIDPQSKIPE 120
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFCP GP+C+ RH+K
Sbjct: 121 CLNYSRGFCPEGPNCKNRHIK 141
>gi|198425870|ref|XP_002130883.1| PREDICTED: similar to YTH domain family 3 (predicted) [Ciona
intestinalis]
Length = 623
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 7/139 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+F++KS + +++ S++ +W + +L+ AF + VIL++SVN + HF G
Sbjct: 435 ARFFVIKSYSEDDIHRSIKYNIWCSTDHGNKRLDAAFREQQGHGPVILLYSVNGSGHFCG 494
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M ++I S G W + F VKW+ ++ + RH+R NEN PV
Sbjct: 495 VAEMLTQIDYSKRAGVW----AQDKWKGKFQVKWIYAKDVPNSQLRHIRLENNENKPVTN 550
Query: 379 SRDCQELEPSIGEQLAALL 397
SRD QE+ G Q+ ++
Sbjct: 551 SRDTQEVPAEKGRQVLKII 569
>gi|291238118|ref|XP_002738978.1| PREDICTED: CG6422-like [Saccoglossus kowalevskii]
Length = 565
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+FI+KS + +++ S++ +W + +L+ AF + V L +SVN + HF G
Sbjct: 391 ARFFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRERQGKGPVYLYYSVNGSGHFCG 450
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S++ + G W + F VKW+ + ++ + RH+R NEN PV
Sbjct: 451 MAQMMSEVDYNTTTGVW----AQDKWKGKFEVKWIYVKDVPNSQLRHIRLENNENKPVTN 506
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEE 419
SRD QE+ G+Q+ +++ + + KR+EE
Sbjct: 507 SRDTQEVPVEKGKQVLKIMHNYRHTTSIFDDFGHYEKRQEE 547
>gi|400595310|gb|EJP63115.1| Zinc finger CCCH type domain containing protein [Beauveria bassiana
ARSEF 2860]
Length = 512
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG C FLH+Y+ RMP C FF G C ++C+Y H + + C
Sbjct: 328 VCKHWLRGLCKKGIPCEFLHEYNLRRMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 387
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 388 HYDMGFCPLGPVCAKKHVR 406
>gi|189193801|ref|XP_001933239.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978803|gb|EDU45429.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 573
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 214 TAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQG----ISRYFIVKS 269
TA SA + QQ+ +P TQ +L G + +T P+ S+YFIVKS
Sbjct: 287 TAPSAMIGQQKNASRPATP-TQDGAADDLSGGAVESPSHKSTEEPKTSGDPASKYFIVKS 345
Query: 270 CNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
++LELSV+ G+WATQ NE LN+AF SAENV LIFS N++ + G A+M S I
Sbjct: 346 LTLQDLELSVRNGIWATQSHNEDVLNKAFRSAENVYLIFSANKSGEYFGYARMASPI 402
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDS 403
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELEPS+GE+L + + P +
Sbjct: 492 WGKPFKIEWVSTNRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGERLVQMFHRGPSA 551
Query: 404 ELMAISV 410
+A V
Sbjct: 552 ATVAAPV 558
>gi|406865146|gb|EKD18189.1| Zinc finger CCCH type domain containing protein [Marssonina brunnea
f. sp. 'multigermtubi' MB_m1]
Length = 358
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 72 SFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--ED 128
++ VC+HWLR LC KG++C FLH+Y+ +MP C FF G C D C+Y H +
Sbjct: 168 NYNNLVCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFAKNGYCSNGDECLYLHLDPSSK 227
Query: 129 IKECNMYKLGFCPNGPDCRYRHVK 152
+ C Y+ GFCP GP C RHV+
Sbjct: 228 LPPCPHYEKGFCPLGPVCSQRHVR 251
>gi|223947231|gb|ACN27699.1| unknown [Zea mays]
Length = 687
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 89/173 (51%), Gaps = 19/173 (10%)
Query: 240 QNLPNG-------LPN--QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSN 290
Q+LP+G +P+ Q NR+ P+ +++F++KS + +++ SV+ VWA+ +
Sbjct: 411 QSLPSGESKDDSAVPDRAQFNRDDFPVQYDAAKFFVIKSYSEDDIHKSVKYNVWASTTNG 470
Query: 291 EAKLNEAFDSAEN------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHY 344
KL+ A+ A++ + L FSVN + F G A+MT + G W+ +
Sbjct: 471 NKKLDAAYQEAQSKGSACPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLGYWQ----QDKW 526
Query: 345 GRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+FSVKW + ++ + +H+ NEN PV SRD QE+ G Q+ +
Sbjct: 527 NGSFSVKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEIHLEQGLQMLKIF 579
>gi|414864891|tpg|DAA43448.1| TPA: hypothetical protein ZEAMMB73_193181 [Zea mays]
Length = 691
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 234 TQTTQMQNLPNG-------LPN--QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVW 284
T + Q+LP+G +P+ Q NR+ P+ +++F++KS + +++ SV+ VW
Sbjct: 405 TIAVKGQSLPSGESKDDSAVPDRAQFNRDDFPVQYDAAKFFVIKSYSEDDIHKSVKYNVW 464
Query: 285 ATQRSNEAKLNEAFDSAEN------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYA 338
A+ + KL+ A+ A++ + L FSVN + F G A+MT + G W+
Sbjct: 465 ASTTNGNKKLDAAYQEAQSKGSACPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLGYWQ-- 522
Query: 339 HGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ +FSVKW + ++ + +H+ NEN PV SRD QE+ G Q+ +
Sbjct: 523 --QDKWNGSFSVKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEIHLEQGLQMLKIF 579
>gi|293335255|ref|NP_001169717.1| uncharacterized protein LOC100383598 [Zea mays]
gi|224031121|gb|ACN34636.1| unknown [Zea mays]
gi|414864890|tpg|DAA43447.1| TPA: hypothetical protein ZEAMMB73_193181 [Zea mays]
Length = 690
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 91/179 (50%), Gaps = 19/179 (10%)
Query: 234 TQTTQMQNLPNG-------LPN--QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVW 284
T + Q+LP+G +P+ Q NR+ P+ +++F++KS + +++ SV+ VW
Sbjct: 404 TIAVKGQSLPSGESKDDSAVPDRAQFNRDDFPVQYDAAKFFVIKSYSEDDIHKSVKYNVW 463
Query: 285 ATQRSNEAKLNEAFDSAEN------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYA 338
A+ + KL+ A+ A++ + L FSVN + F G A+MT + G W+
Sbjct: 464 ASTTNGNKKLDAAYQEAQSKGSACPIFLFFSVNTSGQFVGVAEMTGAVDFEKTLGYWQ-- 521
Query: 339 HGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ +FSVKW + ++ + +H+ NEN PV SRD QE+ G Q+ +
Sbjct: 522 --QDKWNGSFSVKWHIVKDVPNNILKHIILENNENKPVTNSRDTQEIHLEQGLQMLKIF 578
>gi|344236286|gb|EGV92389.1| Putative cleavage and polyadenylation specificity factor subunit
4-like protein [Cricetulus griseus]
Length = 216
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 51/92 (55%), Gaps = 8/92 (8%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCV 121
P+ H G + VC+HWLR LC KGD C FLHQYD RMPVC F F C
Sbjct: 55 CPLRHEKGEKI---VVCKHWLRGLCRKGDCCNFLHQYDIDRMPVCYFHSKF---VGPLCK 108
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVKL 153
Y H ++ + C Y GFCP GP C++ H K+
Sbjct: 109 YHHVHQVM--CLNYFTGFCPKGPKCQFGHPKM 138
>gi|91084167|ref|XP_971030.1| PREDICTED: similar to YTH domain family, member 3 [Tribolium
castaneum]
Length = 594
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+F++KS + +++ S++ +W + +L++A+ E V L FSVN + HF G
Sbjct: 362 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREREAHGAVYLFFSVNGSGHFCG 421
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 422 MAQMVSPVDYNANSSVWS----QDKWKGQFKVRWIYVKDVPNVQLRHIRLENNENKPVTN 477
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPF 438
SRD QE+ + G Q+ +++ S + KR+EE+ P DN D+
Sbjct: 478 SRDTQEVPHAKGLQVLRIMHSYRHSTSIFDDFVHYEKRQEEEDSRKQPHK--DNHDMSGH 535
Query: 439 EDNEEEEEEE 448
+ + +E E
Sbjct: 536 GNRDHKERGE 545
>gi|366988641|ref|XP_003674087.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
gi|342299950|emb|CCC67706.1| hypothetical protein NCAS_0A11480 [Naumovozyma castellii CBS 4309]
Length = 215
Score = 83.2 bits (204), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCV 121
P+ H+ G + VC+HWLR LC K D C FLH+Y+ +MP C FF G C + +C
Sbjct: 54 PMKHNLGIFQ-NKIVCKHWLRGLCKKNDQCEFLHEYNLRKMPECVFFSKNGYCTQGAECP 112
Query: 122 YKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
Y H + I C Y LGFCP G +C+ +H+K
Sbjct: 113 YLHIDPQSKIPNCEDYDLGFCPLGQECKRKHIK 145
>gi|239792848|dbj|BAH72717.1| ACYPI007246 [Acyrthosiphon pisum]
Length = 148
Score = 83.2 bits (204), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G+ A P+ H G R+ VC+HWLR LC KGD C FLH+YD ++MP C F+ F
Sbjct: 47 GSCSKGALCPMRHVRGDRT---VVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYARFN 103
Query: 114 ECREQDCVYKHTNED--IKECNMYKLGF 139
C ++C + H + + +K+C Y GF
Sbjct: 104 ACHNKECPFLHIDPESKLKDCPWYDRGF 131
>gi|405968436|gb|EKC33508.1| Putative ATP-dependent RNA helicase YTHDC2 [Crassostrea gigas]
Length = 1572
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
Query: 253 NATPLPQGIS--RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
++TP QG S +YF+VK N++ L++++ V+AT +E K N+A + V LIFS+
Sbjct: 1257 SSTPGSQGTSPVKYFVVKPNNQKALDIALSNSVFATTPKSETKFNKAIQDGKEVYLIFSM 1316
Query: 311 NRTRHFQGCAKMTS-----KIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRH 365
+ FQG AK+T+ K G G G F ++W+K + F T++
Sbjct: 1317 IDSAQFQGYAKVTAQSSQDKCPDMSGDG----------LGGTFKIEWMKKTPVPFRATQN 1366
Query: 366 LRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ N +NEN V+ S+D QELE S GE+L +L
Sbjct: 1367 ICNSWNENKKVQYSKDGQELEYSCGERLIQVL 1398
>gi|344229129|gb|EGV61015.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
gi|344229130|gb|EGV61016.1| hypothetical protein CANTEDRAFT_116139 [Candida tenuis ATCC 10573]
Length = 193
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 49 APSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRF 108
P S + P+ ++ P H + + VC+HWLR LC K D C FLH+Y+ +MP C F
Sbjct: 42 IPQSPNSCPNGSNCPNKHVPPMYN-NKIVCKHWLRGLCKKNDHCEFLHEYNLRKMPECLF 100
Query: 109 FRLFGECRE-QDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
+ G C + +C+Y H + I EC Y GFCP GP C RHV+
Sbjct: 101 YSRNGYCTQTNECLYLHVDPQSKIPECQNYLRGFCPEGPKCVNRHVR 147
>gi|115928273|ref|XP_786921.2| PREDICTED: YTH domain family protein 3-like [Strongylocentrotus
purpuratus]
Length = 628
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 84/163 (51%), Gaps = 7/163 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
SR FI+KS + +++ S++ G+W + +L+ A ++ V LI+SVN + HF G
Sbjct: 454 SRIFIIKSYSEDDIHRSIKYGIWCSTEHGNKRLDAAMRERQSKGPVYLIYSVNGSGHFCG 513
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S++ + G W + F V+W+ + ++ + RH+R N+N PV
Sbjct: 514 VAEMMSEVDYTTNTGVW----AQDKWKGRFDVRWVYVKDVPNSQLRHIRLENNDNKPVTN 569
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
SRD QE+ +Q+ +++ + + + KR+EE +
Sbjct: 570 SRDTQEVLLDKAKQVMKIIHNFKHTTSIFDDFSHYEKRQEEDS 612
>gi|452001978|gb|EMD94437.1| hypothetical protein COCHEDRAFT_1222928 [Cochliobolus
heterostrophus C5]
Length = 255
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G PD + P H+ S+ VC+HWLR LC KG+ C FLH+Y+ RMP C ++
Sbjct: 54 GHCPDGSKCPNKHNVSS-SYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQ 112
Query: 114 ECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
C DC+Y H + D K C Y GFCP GP C +H K
Sbjct: 113 TCSNGDDCLYLHLDPDAKRASCPHYDRGFCPLGPHCALKHNK 154
>gi|451853678|gb|EMD66971.1| hypothetical protein COCSADRAFT_283486 [Cochliobolus sativus
ND90Pr]
Length = 255
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G PD + P H+ S+ VC+HWLR LC KG+ C FLH+Y+ RMP C ++
Sbjct: 54 GHCPDGSKCPNKHNVSS-SYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQ 112
Query: 114 ECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
C DC+Y H + D K C Y GFCP GP C +H K
Sbjct: 113 TCSNGDDCLYLHLDPDAKRPSCPHYDRGFCPLGPHCALKHNK 154
>gi|342878227|gb|EGU79582.1| hypothetical protein FOXB_09865 [Fusarium oxysporum Fo5176]
Length = 252
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 53 SGAAPDHASAPVPHHSGRRS------FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
SG P+ P H S ++ VC+HWLR LC KG+ C FLH+Y+ +MP C
Sbjct: 48 SGHCPNGTRCPERHVSDSKTSQPSGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPEC 107
Query: 107 RFFRLFGECREQD-CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
FF G C D C+Y H + + C Y +GFCP GP+C +HV+
Sbjct: 108 NFFMRNGYCSNGDECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVR 156
>gi|254580849|ref|XP_002496410.1| ZYRO0C17776p [Zygosaccharomyces rouxii]
gi|238939301|emb|CAR27477.1| ZYRO0C17776p [Zygosaccharomyces rouxii]
Length = 210
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 13/109 (11%)
Query: 50 PSSS---GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
PSS + P P+ H+ + VC+HWLR LC K D C +LH+Y+ +MP C
Sbjct: 43 PSSCPRGASCPKKHVLPIFHN-------KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPEC 95
Query: 107 RFFRLFGECREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
F+ G C + +C Y H + I C Y +GFCP GP+C+ RHVK
Sbjct: 96 VFYSKNGYCTQTPECQYLHIDPQSKIAPCEEYTMGFCPQGPNCKKRHVK 144
>gi|270006638|gb|EFA03086.1| hypothetical protein TcasGA2_TC012992 [Tribolium castaneum]
Length = 599
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+F++KS + +++ S++ +W + +L++A+ E V L FSVN + HF G
Sbjct: 373 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREREAHGAVYLFFSVNGSGHFCG 432
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 433 MAQMVSPVDYNANSSVWS----QDKWKGQFKVRWIYVKDVPNVQLRHIRLENNENKPVTN 488
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIVPF 438
SRD QE+ + G Q+ +++ S + KR+EE+ P DN D+
Sbjct: 489 SRDTQEVPHAKGLQVLRIMHSYRHSTSIFDDFVHYEKRQEEEDSRKQPHK--DNHDMSGH 546
Query: 439 EDNEEEEEEE 448
+ + +E E
Sbjct: 547 GNRDHKERGE 556
>gi|145475023|ref|XP_001423534.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390595|emb|CAK56136.1| unnamed protein product [Paramecium tetraurelia]
Length = 510
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 7/155 (4%)
Query: 246 LPNQTNRNATPLPQGI--SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 303
+ QT + L Q I + +FIVKS +N+ L+ VWAT R N L + F++ +
Sbjct: 151 IKQQTEISNAELEQQIKNAVFFIVKSNTEQNVILAKTHDVWATTRRNFGTLMDQFNNKK- 209
Query: 304 VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYA-HGTAHYGRNFSVKWLKLCELSFHK 362
VILIF NR F GCAKM K W++ T NFSV+WL+ + F K
Sbjct: 210 VILIFIANRVEKFLGCAKM--KNIQVPRDPKWQWCGTSTIQLADNFSVEWLRKGTVDFAK 267
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ NP +L ++ S+DCQE+ IG+++ L
Sbjct: 268 LQDTINPKTGDLVIR-SKDCQEVPADIGQRICLLF 301
>gi|323335176|gb|EGA76466.1| Yth1p [Saccharomyces cerevisiae Vin13]
gi|323346323|gb|EGA80613.1| Yth1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 208
Score = 82.8 bits (203), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|410516933|sp|Q4IPA4.2|YTH1_GIBZE RecName: Full=mRNA 3'-end-processing protein YTH1
gi|408399218|gb|EKJ78341.1| hypothetical protein FPSE_01446 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 53 SGAAPDHASAPVPHHSGRRSFRQT------VCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
SG P+ P H S ++ + T VC+HWLR LC KG+ C FLH+Y+ +MP C
Sbjct: 48 SGHCPNGTRCPERHVSDSKTSQPTGGLNSLVCKHWLRGLCKKGEHCEFLHEYNLRKMPEC 107
Query: 107 RFFRLFGECREQD-CVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
FF G C D C+Y H + + C Y +GFCP GP+C +HV+
Sbjct: 108 NFFMRNGYCSNGDECLYLHIDPQSRLPPCPHYDMGFCPLGPNCSKKHVR 156
>gi|410079256|ref|XP_003957209.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
gi|372463794|emb|CCF58074.1| hypothetical protein KAFR_0D04260 [Kazachstania africana CBS 2517]
Length = 215
Score = 82.8 bits (203), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C FLH+Y+ +MP C F+ G C + +C Y H + I
Sbjct: 64 KIVCKHWLRGLCKKNDQCEFLHEYNLRKMPECVFYAKNGYCTQTPECQYLHVDPISKIPR 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y GFC +GP+C+ RHVK
Sbjct: 124 CEAYDQGFCFDGPNCKKRHVK 144
>gi|367001921|ref|XP_003685695.1| hypothetical protein TPHA_0E01680 [Tetrapisispora phaffii CBS 4417]
gi|357523994|emb|CCE63261.1| hypothetical protein TPHA_0E01680 [Tetrapisispora phaffii CBS 4417]
Length = 331
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE---NVILIFSVNRT 313
+P+G S++F++KS N E+++ S +W++ +L+EAF S E + L+FSV ++
Sbjct: 173 VPEG-SKFFVIKSSNIEHIQKSYYNRIWSSTYFGNKRLSEAFISLEYDSKIFLLFSVTKS 231
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A+MTS I ++ W+ +G+ F V+W+ + ++ +H P NE
Sbjct: 232 GRFCGVAEMTSNIQDNLDTSIWE--DDDKKFGQAFKVRWVFVRDVHNRNLKHFLIPANEM 289
Query: 374 LPVKISRDCQELEPSIGEQLAALL 397
P+ SRD QE+ SIG + L
Sbjct: 290 KPITNSRDTQEIPFSIGNSIIKLF 313
>gi|6325364|ref|NP_015432.1| Yth1p [Saccharomyces cerevisiae S288c]
gi|74676379|sp|Q06102.1|YTH1_YEAST RecName: Full=mRNA 3'-end-processing protein YTH1; AltName:
Full=Yeast 30 kDa homolog 1
gi|914978|gb|AAB68077.1| Ypr107cp [Saccharomyces cerevisiae]
gi|45270012|gb|AAS56387.1| YPR107C [Saccharomyces cerevisiae]
gi|256269069|gb|EEU04406.1| Yth1p [Saccharomyces cerevisiae JAY291]
gi|285815629|tpg|DAA11521.1| TPA: Yth1p [Saccharomyces cerevisiae S288c]
gi|323302587|gb|EGA56394.1| Yth1p [Saccharomyces cerevisiae FostersB]
gi|323306840|gb|EGA60125.1| Yth1p [Saccharomyces cerevisiae FostersO]
gi|349581909|dbj|GAA27066.1| K7_Yth1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365762575|gb|EHN04109.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296110|gb|EIW07213.1| Yth1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 208
Score = 82.8 bits (203), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|149054709|gb|EDM06526.1| similar to hypothetical protein D11Ertd636e (predicted), isoform
CRA_c [Rattus norvegicus]
Length = 160
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 61/139 (43%), Gaps = 15/139 (10%)
Query: 7 GLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
G +F FE ++ G + S+A A G P+ H
Sbjct: 10 GFTFTFEQDVELQRGTGLLPFQGMDKSSSAVCNFFA----------KGLCVKGMLCPLRH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
G + VC+HWLR LC K D C FLHQYD SRMPVC F FG C ++C + H
Sbjct: 60 EQGEK---MVVCKHWLRGLCRKSDCCNFLHQYDVSRMPVCYFHSKFGNCNNKECPFLHLK 116
Query: 127 --EDIKECNMYKLGFCPNG 143
+++C Y GFC G
Sbjct: 117 PVPKLQDCPWYDQGFCKEG 135
>gi|259150256|emb|CAY87059.1| Yth1p [Saccharomyces cerevisiae EC1118]
Length = 208
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|353237438|emb|CCA69411.1| related to Cleavage and polyadenylation specificity factor
[Piriformospora indica DSM 11827]
Length = 290
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIKECNM 134
TVC+HWLR LC K DAC FLH+Y+ RMP C ++ G C ++C+Y H EC
Sbjct: 96 TVCKHWLRGLCKKSDACEFLHEYNLRRMPECWWYAKNGFCSAGEECLYAHPKGSRVECPD 155
Query: 135 YKLGFCPNGPDCRYRHVK 152
Y GFC GPDC +HV+
Sbjct: 156 YNRGFCKLGPDCPRKHVR 173
>gi|387201534|gb|AFJ68908.1| cleavage and polyadenylation specificity factor subunit 4, partial
[Nannochloropsis gaditana CCMP526]
Length = 242
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 64 VPHHSGRRSF----RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGEC-REQ 118
VP G RS + VC H+L +C C +LHQYD R+P+C F +C R+
Sbjct: 42 VPRRGGGRSMAPGSKNVVCIHYLVGMCALDKDCPYLHQYDLDRVPICPFGS---KCVRDD 98
Query: 119 DCVYKH-TNEDIKECNMYKLGFCPNGPDCRYRHV 151
DC +KH T ED EC Y+ GFC GP CRY+HV
Sbjct: 99 DCPFKHVTEEDKTECVFYRQGFCMYGPFCRYKHV 132
>gi|190408034|gb|EDV11299.1| protein YTH1 [Saccharomyces cerevisiae RM11-1a]
gi|207340294|gb|EDZ68688.1| YPR107Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|323331343|gb|EGA72761.1| Yth1p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|330914053|ref|XP_003296476.1| hypothetical protein PTT_06588 [Pyrenophora teres f. teres 0-1]
gi|311331360|gb|EFQ95440.1| hypothetical protein PTT_06588 [Pyrenophora teres f. teres 0-1]
Length = 665
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 214 TAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQG----ISRYFIVKS 269
TA SA + QQ+ +P TQ +L G + +T P+ ++YFIVKS
Sbjct: 380 TAPSAMIGQQKNASRPATP-TQDGAADDLSGGAVESPSHKSTEEPKTSGDPANKYFIVKS 438
Query: 270 CNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
++LELSV+ G+WATQ NE LN+AF SAENV L+FS N++ + G A+M S I
Sbjct: 439 LTLQDLELSVRNGIWATQSHNEDVLNKAFRSAENVYLVFSANKSGEYFGYARMASPI 495
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDS 403
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELEPS+GE+L + + P +
Sbjct: 585 WGKPFKIEWVSTNRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGERLVQMFHRGPSA 644
Query: 404 ELMA 407
A
Sbjct: 645 AAAA 648
>gi|365757902|gb|EHM99773.1| Yth1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401838431|gb|EJT42071.1| YTH1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 82.4 bits (202), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSTCPRRHIK 144
>gi|402085474|gb|EJT80372.1| mRNA 3'-end-processing protein yth-1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 296
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 72 SFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--ED 128
+F VC+HWLR LC KGD+C FLH+Y+ +MP C F+ G C+ ++C+Y H +
Sbjct: 90 AFNSMVCKHWLRGLCKKGDSCEFLHEYNLRKMPECNFYLRHGFCQNGEECMYLHIDPQSK 149
Query: 129 IKECNMYKLGFCPNGPDCRYRHVK 152
+ C Y GFCP GP C +HV+
Sbjct: 150 LPPCPHYDQGFCPLGPRCAKKHVR 173
>gi|151942883|gb|EDN61229.1| polyadenylation factor subunit [Saccharomyces cerevisiae YJM789]
Length = 208
Score = 82.4 bits (202), Expect = 8e-13, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPATKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|444313869|ref|XP_004177592.1| hypothetical protein TBLA_0A02750 [Tetrapisispora blattae CBS 6284]
gi|387510631|emb|CCH58073.1| hypothetical protein TBLA_0A02750 [Tetrapisispora blattae CBS 6284]
Length = 606
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 14/151 (9%)
Query: 257 LPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD----------SAENVIL 306
+P G SR+F++KSC+ E+++ S G+W++ +L+EA++ S + L
Sbjct: 446 IPVG-SRFFVIKSCSLEHIKKSFYNGIWSSTFFGNKRLSEAYEEITLSNTLKGSTSKIYL 504
Query: 307 IFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 366
+FSVN + F G A+MTS + W + + + + F V+W+ + ++ +H
Sbjct: 505 LFSVNASGKFCGVAEMTSNLLDEYDTSIW---NDSKKFAKAFQVRWIIVRDIFNKYLKHF 561
Query: 367 RNPYNENLPVKISRDCQELEPSIGEQLAALL 397
P N+N PV SRD QE+ SIG + +
Sbjct: 562 LLPSNDNKPVTNSRDTQEIPFSIGSSILKIF 592
>gi|156381271|ref|XP_001632189.1| predicted protein [Nematostella vectensis]
gi|156219241|gb|EDO40126.1| predicted protein [Nematostella vectensis]
Length = 170
Score = 82.4 bits (202), Expect = 9e-13, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN--VILIFSVNRTRHFQGC 319
+R+FI+KS + +++ S++ VW + +LNEAF + + L FSVN + HF G
Sbjct: 5 ARFFIIKSYSEDDIHRSIKYCVWTSTEHGNRRLNEAFREQRHGPIYLFFSVNGSGHFCGI 64
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S++ + G W + F VKW + ++ + RH+R N+N PV S
Sbjct: 65 AQMMSEVNLDIETGIWS----QDKWKGKFEVKWYYVKDVPNNALRHIRLENNDNKPVTNS 120
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+ P Q+ +++ + A KR++E+ K V
Sbjct: 121 RDTQEVPPEKARQVVKIIHSYKHQTSIFDDFAHYEKRQDEEFKKV 165
>gi|449274212|gb|EMC83495.1| YTH domain family protein 1, partial [Columba livia]
Length = 545
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 384 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 443
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 444 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 499
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 500 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 540
>gi|147902004|ref|NP_001083479.1| YTH domain family, member 1 [Xenopus laevis]
gi|38014398|gb|AAH60445.1| MGC68505 protein [Xenopus laevis]
Length = 565
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 396 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDNAFRSMNGKGPVYLLFSVNGSGHFCGV 455
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKWL + ++ ++ RH+R N+N PV S
Sbjct: 456 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWLFVKDVPNNQLRHIRLENNDNKPVTNS 511
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGVNP 426
RD QE+ + + ++ Y S S + + EEE + V P
Sbjct: 512 RDTQEVPLEKAKLVLKIIATYKHTTSIFDDFSHYEKRQEEEEVVRKVTP 560
>gi|281352333|gb|EFB27917.1| hypothetical protein PANDA_015325 [Ailuropoda melanoleuca]
Length = 535
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +A + V L+FSVN + HF G
Sbjct: 373 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRAAGSKGPVYLLFSVNGSGHFCGV 432
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+MTS + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 433 AEMTSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 488
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 489 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 529
>gi|440639939|gb|ELR09858.1| hypothetical protein GMDG_04338 [Geomyces destructans 20631-21]
Length = 251
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 53 SGAAPDHASAPVPHHSGRR--SFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFR 110
+G P AS P H + ++ VC+HWLR LC KG+ C FLH+Y+ RMP C FF
Sbjct: 46 AGHCPLGASCPDRHIAAPTGSNYNNLVCKHWLRGLCKKGEHCEFLHEYNLRRMPECSFFA 105
Query: 111 LFGECRE-QDCVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
G C ++C+Y H + + + C Y+ GFCP GP C RH++
Sbjct: 106 RNGYCSNGEECLYLHVDPESRLPACGWYERGFCPLGPRCARRHMR 150
>gi|296424956|ref|XP_002842010.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638266|emb|CAZ86201.1| unnamed protein product [Tuber melanosporum]
Length = 750
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 51/76 (67%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGC 319
G R FIVKS E+L+LSV+ +WATQ NE+ LN+AF++A+NV LIFS N++ + G
Sbjct: 527 GKDRIFIVKSLTVEDLDLSVRNRIWATQSHNESTLNQAFETADNVYLIFSANKSGEYYGY 586
Query: 320 AKMTSKIGGSVGGGNW 335
A+MTS I G W
Sbjct: 587 ARMTSPILDDPTGLEW 602
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F V+W+ + F++TR LRN +N N VKI+RD ELE ++G +L L +
Sbjct: 675 WGKPFRVEWVSTTRVPFYRTRGLRNSWNANREVKIARDGTELEENVGRRLIQLFH 729
>gi|328705229|ref|XP_001946397.2| PREDICTED: YTH domain family protein 1-like [Acyrthosiphon pisum]
Length = 639
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 92/177 (51%), Gaps = 8/177 (4%)
Query: 224 QLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGV 283
Q++ P ++ T+ + L + N N P SR+FI+KS + +++ S++ +
Sbjct: 298 QILNSPSEENTKHKLIDEL--KMKNHYNPAEYSNPPEGSRFFIIKSYSEDDIHRSIKYEI 355
Query: 284 WATQRSNEAKLNEAFDSAEN--VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGT 341
W + +L++AF S++ + L++SVN + HF G A+M S + + W
Sbjct: 356 WCSTDHGNRRLDQAFSSSDKKKIFLLYSVNGSGHFCGVAEMISAVDYNSSSSVW----CQ 411
Query: 342 AHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+ F V+W+ + ++ ++ RH+R NEN PV SRD QE+ + G Q+ +++
Sbjct: 412 DKWKGQFGVRWIYVKDVPNNQLRHIRLENNENKPVTHSRDTQEVPYNQGVQVLRIIH 468
>gi|242008364|ref|XP_002424976.1| YTH domain protein, putative [Pediculus humanus corporis]
gi|212508605|gb|EEB12238.1| YTH domain protein, putative [Pediculus humanus corporis]
Length = 486
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 9/175 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-----VILIFSVNRTRHF 316
+R+F++KS + +++ S++ +W + +L++AF +E + L FSVN + HF
Sbjct: 270 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAFRESEKNGSGPIYLFFSVNGSGHF 329
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M + + W + F V+WL + ++ ++ RH++ NEN PV
Sbjct: 330 CGMAQMVTPVDYHASSSVW----SQDKWKGQFRVRWLYVKDVPNNQLRHIKLENNENKPV 385
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGD 431
SRD QE+ G Q+ +++ S + KR+EE+ P++ D
Sbjct: 386 TNSRDTQEVPFEKGRQVLKVIHQYRHSTSIFDDFIHYEKRQEEEVSRKMPEDVRD 440
>gi|340924394|gb|EGS19297.1| putative mRNA 3'-end processing protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 265
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR+LC KG+ C FLH+Y+ +MP C FF G C D C+Y H + + C
Sbjct: 98 VCKHWLRALCKKGETCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSRVPPCP 157
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y+ GFCP GP C +HVK
Sbjct: 158 AYERGFCPAGPKCDKKHVK 176
>gi|355562962|gb|EHH19524.1| hypothetical protein EGK_02197, partial [Macaca mulatta]
Length = 556
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 382 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 441
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 442 AEMKSPVDYGTSAGVW----SQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 497
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 498 RDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEE 538
>gi|355784322|gb|EHH65173.1| hypothetical protein EGM_01882, partial [Macaca fascicularis]
Length = 557
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 383 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 442
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 443 AEMKSPVDYGTSAGVW----SQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 498
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 499 RDTQEVPLEKAKQVLKIISSYKHTTSIFDDFAHYEKRQEEE 539
>gi|452980188|gb|EME79949.1| hypothetical protein MYCFIDRAFT_166375 [Pseudocercospora fijiensis
CIRAD86]
Length = 571
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 244 NGLPNQTNRNATPLPQG---ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDS 300
+G P + A P P G + +YFIVKS ++LE SV+ G WATQ NE LN+A+D
Sbjct: 344 SGDPPSLSTGAVPPPPGEKVLEKYFIVKSLTAQDLEASVRNGTWATQSHNEDGLNKAYDQ 403
Query: 301 AENVILIFSVNRTRHFQGCAKMTSKIGG 328
AENV LIFS N++ + G A+M S I G
Sbjct: 404 AENVYLIFSANKSGEYFGYARMASIISG 431
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 343 HYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
++GR F ++W L F++TR LRNP+N N VKI+RD ELEPS+G +L ++ +
Sbjct: 500 NWGRQFKIEWQSTSRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGRRLISMFH 555
>gi|255717178|ref|XP_002554870.1| KLTH0F15752p [Lachancea thermotolerans]
gi|238936253|emb|CAR24433.1| KLTH0F15752p [Lachancea thermotolerans CBS 6340]
Length = 258
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 79/151 (52%), Gaps = 7/151 (4%)
Query: 250 TNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE---NVIL 306
TN+ T +SR+F++KSC E++++S + GVW++ +L++A+ E + L
Sbjct: 103 TNKIPTFKIPNLSRFFVIKSCRSEHIQISTKNGVWSSTELGNRRLSQAYCQREPGSRIFL 162
Query: 307 IFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHL 366
+FSVN + F G A+MTS + + + + + FSV+WL + + + RH
Sbjct: 163 LFSVNGSGCFCGLAEMTSNLRDAKAN----FWMDKKRFQKVFSVRWLIVRNVPNRQVRHY 218
Query: 367 RNPYNENLPVKISRDCQELEPSIGEQLAALL 397
NP N+ V SRD QEL +G + +
Sbjct: 219 LNPMNDMKSVTQSRDTQELPLEVGRSIVKIF 249
>gi|451848716|gb|EMD62021.1| hypothetical protein COCSADRAFT_173416 [Cochliobolus sativus
ND90Pr]
Length = 662
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 214 TAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNAT----PLPQGISRYFIVKS 269
TA SA + QQ+ +P+ +T +L G + A P ++YFIVKS
Sbjct: 374 TAPSAMIDQQKYTSRPETPAQDSTP-DDLAGGAVEPPVQKAIDGEKPSADVANKYFIVKS 432
Query: 270 CNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
++LELSV+ G+WATQ NE LN+AF SA+NV LIFS N++ + G A+M S I
Sbjct: 433 LTLQDLELSVRNGIWATQSHNEDILNKAFQSAQNVYLIFSANKSGEYFGYARMASPI 489
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W+ L F++ R LRNP+N N VKI+RD ELEPS+GE+L + +
Sbjct: 582 WGKPFKIEWISTNRLPFYRARGLRNPWNANREVKIARDGTELEPSVGERLVQMFH 636
>gi|430810962|emb|CCJ31506.1| unnamed protein product [Pneumocystis jirovecii]
Length = 250
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 58/106 (54%), Gaps = 10/106 (9%)
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
A PD SGR + VC+HWLR LC KGD C FLH+Y+ +MP CRFF G
Sbjct: 51 ACPDKHFFSKDGTSGRSN--SIVCKHWLRGLCKKGDQCEFLHEYNLKKMPECRFFAKHGF 108
Query: 115 CRE-QDCVYKHTNEDIK--ECNMYKLGFCPNG-----PDCRYRHVK 152
C ++C+Y H + D K C Y +GFCP G P C +H++
Sbjct: 109 CSNGEECLYLHIDPDSKVGSCPWYIMGFCPLGCFSIRPKCSQKHIR 154
>gi|189203027|ref|XP_001937849.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984948|gb|EDU50436.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 275
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G PD P H+ S+ VC+HWLR LC KG+ C FLH+Y+ RMP C ++
Sbjct: 74 GHCPDGNRCPNKHNVTS-SYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQ 132
Query: 114 ECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
C DC+Y H + + K C Y GFCP GP C +H K
Sbjct: 133 TCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPLGPHCSLKHNK 174
>gi|367006911|ref|XP_003688186.1| hypothetical protein TPHA_0M01770 [Tetrapisispora phaffii CBS 4417]
gi|357526493|emb|CCE65752.1| hypothetical protein TPHA_0M01770 [Tetrapisispora phaffii CBS 4417]
Length = 210
Score = 81.3 bits (199), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H + I +
Sbjct: 63 KIVCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFFSKNGFCTQTPECQYLHIDPLNKIPK 122
Query: 132 CNMYKLGFCPNGPDCRYRHV 151
C Y+LG+C GP+C RH+
Sbjct: 123 CEDYELGYCAQGPNCNKRHI 142
>gi|302923751|ref|XP_003053742.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
gi|256734683|gb|EEU48029.1| hypothetical protein NECHADRAFT_75190 [Nectria haematococca mpVI
77-13-4]
Length = 258
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C D C+Y H + + C
Sbjct: 78 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGDECLYLHIDPQSRLPPCP 137
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP+C +HV+
Sbjct: 138 HYDMGFCPLGPNCSKKHVR 156
>gi|45361633|ref|NP_989392.1| YTH domain family, member 1 [Xenopus (Silurana) tropicalis]
gi|40675327|gb|AAH64856.1| YTH domain family, member 1 [Xenopus (Silurana) tropicalis]
Length = 565
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 396 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNGKGPVYLLFSVNGSGHFCGV 455
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKWL + ++ ++ RH+R N+N PV S
Sbjct: 456 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWLFVKDVPNNQLRHIRLENNDNKPVTNS 511
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ + + ++ + + + KR+EE+
Sbjct: 512 RDTQEVPLEKAKLVLKIIATYKHTTSIFDDFSHYEKRQEEE 552
>gi|212532489|ref|XP_002146401.1| YT521-B-like splicing factor, putative [Talaromyces marneffei ATCC
18224]
gi|210071765|gb|EEA25854.1| YT521-B-like splicing factor, putative [Talaromyces marneffei ATCC
18224]
Length = 683
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYF+VKS ++LELS Q G+WATQ NEA LN A++SA+NV LIFS N++ + G A+M
Sbjct: 424 RYFVVKSLTLQDLELSRQSGIWATQTHNEAALNRAYESADNVYLIFSANKSGEYFGYARM 483
Query: 323 TSKI 326
S I
Sbjct: 484 VSTI 487
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 325 KIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQE 384
K ++GGG+ HG +G+ F ++W+ + F++TR LRNP+N N VKI+RD E
Sbjct: 592 KSAAALGGGD--VVHGGQTFGKPFRIEWISTERVPFYRTRGLRNPWNSNREVKIARDGTE 649
Query: 385 LEPSIGEQLAALLYL 399
+EPS+G +L L ++
Sbjct: 650 IEPSVGRKLTQLFHV 664
>gi|452985354|gb|EME85111.1| hypothetical protein MYCFIDRAFT_153180 [Pseudocercospora fijiensis
CIRAD86]
Length = 149
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 266 IVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSK 325
++KS EN+ + ++GVWATQ NE L EAF ++ +VIL+FSVN++ FQG A MTS
Sbjct: 1 MIKSWTHENVNAAQREGVWATQEKNEQLLTEAFKTSRHVILLFSVNKSMAFQGYALMTSL 60
Query: 326 IGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN-----ENLPVKISR 380
+ W A F+VKWL + F HL+N N E L V + +
Sbjct: 61 PDPDLPEPAWAAKLNWATSA-TFTVKWLGTTSIPFRTIGHLKNTLNINEDGEPLAVLVGK 119
Query: 381 DCQELEPSIG 390
D QE+ G
Sbjct: 120 DGQEISADAG 129
>gi|320582100|gb|EFW96318.1| mRNA 3'-end-processing protein, putative [Ogataea parapolymorpha
DL-1]
Length = 219
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC++WLR LC GD C FLH+Y+ RMP C ++ G C + +C+Y H + I E
Sbjct: 70 KIVCKYWLRGLCKMGDDCDFLHEYNLQRMPECAYYSQNGVCTQSPECIYLHVDPQSKIAE 129
Query: 132 CNMY-KLGFCPNGPDCRYRHVK 152
C Y LG+CP+GP C+ RHV+
Sbjct: 130 CYNYSNLGYCPDGPKCQRRHVR 151
>gi|334328397|ref|XP_001373328.2| PREDICTED: YTH domain family protein 2-like [Monodelphis domestica]
Length = 713
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 85/179 (47%), Gaps = 13/179 (7%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 413 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 472
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 473 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 528
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGVNPDNGGDNPDIV 436
RD QE+ +Q+ ++ Y S S + + EEE K NG PD +
Sbjct: 529 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEENVK----KNGVRTPDFL 583
>gi|451998534|gb|EMD90998.1| hypothetical protein COCHEDRAFT_1156345 [Cochliobolus
heterostrophus C5]
Length = 660
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 214 TAESANVHQQQLVQQPQQQGTQTTQMQNLPNGL---PNQTNRNA-TPLPQGISRYFIVKS 269
TA SA + QQ+ +P+ +T +L G P Q + P ++YFIVKS
Sbjct: 372 TAPSAMIDQQKHASRPETPAQDSTP-DDLAGGAVEPPVQKGIDVEKPSTDVANKYFIVKS 430
Query: 270 CNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
++LELSV+ G+WATQ NE LN+AF SA+NV LIFS N++ + G A+M S I
Sbjct: 431 LTLQDLELSVRNGIWATQSHNEDILNKAFQSAQNVYLIFSANKSGEYFGYARMASPI 487
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W+ L F++ R LRNP+N N VKI+RD ELEPS+GE+L + +
Sbjct: 580 WGKPFKIEWISTNRLPFYRARGLRNPWNANREVKIARDGTELEPSVGERLVQMFH 634
>gi|45190275|ref|NP_984529.1| AEL331Wp [Ashbya gossypii ATCC 10895]
gi|74693942|sp|Q758T3.1|YTH1_ASHGO RecName: Full=mRNA 3'-end-processing protein YTH1
gi|44983171|gb|AAS52353.1| AEL331Wp [Ashbya gossypii ATCC 10895]
gi|374107743|gb|AEY96650.1| FAEL331Wp [Ashbya gossypii FDAG1]
Length = 209
Score = 80.9 bits (198), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H + +++
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFTKNGYCTQSPECQYLHIDPTSKVQQ 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C +HVK
Sbjct: 124 CEDYRMGFCPLGTACPCKHVK 144
>gi|213402063|ref|XP_002171804.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
gi|211999851|gb|EEB05511.1| zinc finger protein Yth1 [Schizosaccharomyces japonicus yFS275]
Length = 171
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKEC 132
VC+HWLR LC KG+ C FLH+Y+ +MP C F+ G C ++C+Y H + + + C
Sbjct: 53 VVCKHWLRGLCKKGNQCEFLHEYNLKKMPPCHFYAERGWCSNGEECLYLHLDPSKQVGVC 112
Query: 133 NMYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP CR +HV+
Sbjct: 113 AWYNMGFCPLGPICRGKHVR 132
>gi|432927919|ref|XP_004081092.1| PREDICTED: uncharacterized protein LOC101158487 [Oryzias latipes]
Length = 602
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S N + L+FSVN + HF G
Sbjct: 434 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAYRSLGNKGPLYLLFSVNGSGHFCGV 493
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 494 AEMRSPVDYNAYAGVWS----QDKWKGKFEVKWVFIKDVPNNQLRHIRLENNDNKPVTNS 549
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 550 RDTQEVPLEKAKQVLKVIATFKHTTSIFDDFAHYEKRQEEE 590
>gi|317419909|emb|CBN81945.1| YTH domain family protein 3 [Dicentrarchus labrax]
Length = 616
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S N + L+FSVN + HF G
Sbjct: 453 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAYRSLGNKGPLYLLFSVNGSGHFCGV 512
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 513 AEMRSPVDYNAYAGVWS----QDKWKGKFEVKWVFIKDVPNNQLRHIRLENNDNKPVTNS 568
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 569 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFAHYEKRQEEE 609
>gi|149028482|gb|EDL83867.1| rCG64172 [Rattus norvegicus]
Length = 196
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 62 APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDC 120
P H SG ++ VC+HWLR LC KGD C FLH+YD ++M C F+ F C+ C
Sbjct: 37 CPFCHISGEKT---VVCQHWLRGLCKKGDQCEFLHKYDITKMLECYFYSNF--CKHGPLC 91
Query: 121 VYKHTNEDIKECNMYKLGFCPNGPDCRYRHVKLPGPPPSVE 161
Y+HT + C Y +GFCP G C++ H + P ++E
Sbjct: 92 RYQHTRRVL--CVNYLVGFCPGGASCKFIHPRFELPMGTIE 130
>gi|330934206|ref|XP_003304457.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
gi|311318917|gb|EFQ87453.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
Length = 256
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 54 GAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFG 113
G PD P H+ S+ VC+HWLR LC KG+ C FLH+Y+ RMP C ++
Sbjct: 54 GHCPDGNRCPNKHNVTS-SYNNLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQ 112
Query: 114 ECRE-QDCVYKHTNEDIKE--CNMYKLGFCPNGPDCRYRHVK 152
C DC+Y H + + K C Y GFCP GP C +H K
Sbjct: 113 TCSNGDDCLYLHIDPEAKRPSCPHYDRGFCPLGPHCSLKHNK 154
>gi|348512142|ref|XP_003443602.1| PREDICTED: hypothetical protein LOC100702349 [Oreochromis
niloticus]
Length = 603
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S N + L+FSVN + HF G
Sbjct: 435 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAYRSLGNKGPLYLLFSVNGSGHFCGV 494
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 495 AEMRSPVDYNAYAGVWS----QDKWKGKFEVKWIFIKDVPNNQLRHIRLENNDNKPVTNS 550
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 551 RDTQEVPLEKAKQVLKVIATYKHTTSIFDDFAHYEKRQEEE 591
>gi|301780724|ref|XP_002925783.1| PREDICTED: YTH domain family protein 1-like [Ailuropoda
melanoleuca]
Length = 610
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +A + V L+FSVN + HF G
Sbjct: 441 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRAAGSKGPVYLLFSVNGSGHFCGV 500
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+MTS + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 501 AEMTSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 556
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 557 RDTQEVPLEKAKQVLKII 574
>gi|41053800|ref|NP_956544.1| YTH domain family protein 2 [Danio rerio]
gi|28839108|gb|AAH47846.1| YTH domain family 2 [Danio rerio]
Length = 596
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV---ILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S N L+FSVN + HF G
Sbjct: 424 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLANKGPPYLLFSVNGSGHFCGV 483
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 484 AEMRSPVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 539
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+ Q+ ++ Y S S + + EEE K V
Sbjct: 540 RDTQEVPLDKARQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKV 586
>gi|444317817|ref|XP_004179566.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
gi|387512607|emb|CCH60047.1| hypothetical protein TBLA_0C02360 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC KG C FLH+Y+ RMP C FF G C + +C Y+H + ++
Sbjct: 67 KIVCKHWLRGLCKKGSRCEFLHEYNLRRMPECVFFARNGFCTQAPECPYRHVKPEDHVEL 126
Query: 132 CNMYKLGFCPNGPDCRYRHV 151
C Y+ GFCP GP C RHV
Sbjct: 127 CTDYQRGFCPRGPSCARRHV 146
>gi|169601476|ref|XP_001794160.1| hypothetical protein SNOG_03603 [Phaeosphaeria nodorum SN15]
gi|160705936|gb|EAT88808.2| hypothetical protein SNOG_03603 [Phaeosphaeria nodorum SN15]
Length = 350
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 48/65 (73%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
S+YFIVKS ++LELSV+ G+WATQ NE LN+AF S ENV LIFS N++ + G A+
Sbjct: 123 SKYFIVKSLTLQDLELSVRNGIWATQSHNEDVLNKAFRSTENVYLIFSANKSGEYFGYAR 182
Query: 322 MTSKI 326
MTS I
Sbjct: 183 MTSPI 187
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W L F++TR LRNP+N N VKI+RD ELEPS+GE+L + +
Sbjct: 270 WGKPFKIEWCSTQRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGERLIQMFH 324
>gi|410909011|ref|XP_003967984.1| PREDICTED: uncharacterized protein LOC101064413 [Takifugu rubripes]
Length = 603
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S N + L+FSVN + HF G
Sbjct: 435 RIFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAYRSLGNKGPLYLLFSVNGSGHFCGV 494
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 495 AEMRSPVDYNAYAGVWS----QDKWKGKFEVKWIFIKDVPNNQLRHIRLENNDNKPVTNS 550
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 551 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFAHYEKRQEEE 591
>gi|380484985|emb|CCF39651.1| hypothetical protein CH063_10425 [Colletotrichum higginsianum]
Length = 251
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 60/103 (58%), Gaps = 7/103 (6%)
Query: 54 GAAPD-HASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLF 112
+ PD HAS+ + SG S VC+HWLR LC KG++C FLH+Y+ +MP C FF
Sbjct: 56 ASCPDRHASSTSSNPSGGPSL---VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRN 112
Query: 113 GECRE-QDCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
G C ++C+Y H + + C Y GFCP GP C +HV+
Sbjct: 113 GYCSNGEECLYLHIDPQSKLPPCPHYDKGFCPLGPRCSKKHVR 155
>gi|156844213|ref|XP_001645170.1| hypothetical protein Kpol_1062p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156115828|gb|EDO17312.1| hypothetical protein Kpol_1062p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 365
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 5/143 (3%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE---NVILIFSVNRTRHFQG 318
SR+F++KS ++++ S G+W++ +L+EAF S + + L+FSVN + F G
Sbjct: 213 SRFFVIKSSRLDHVQKSFYNGIWSSTYFGNKRLSEAFSSLDPGTKLFLLFSVNASGRFCG 272
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W + +G+ F V+W+ + ++ +H P N+ PV
Sbjct: 273 VAEMVSNLEDELDTSIWD--DTSRKFGKAFKVRWVLVRDVHNRSLKHFLIPDNDMKPVTN 330
Query: 379 SRDCQELEPSIGEQLAALLYLEP 401
SRD QE+ SIG + L +P
Sbjct: 331 SRDTQEIPFSIGNSILKLFRADP 353
>gi|401623156|gb|EJS41263.1| yth1p [Saccharomyces arboricola H-6]
Length = 208
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSTCPRRHIK 144
>gi|296412809|ref|XP_002836112.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629918|emb|CAZ80303.1| unnamed protein product [Tuber melanosporum]
Length = 236
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 6/89 (6%)
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHT 125
H+ SF VC+HWLRSLC KG+AC FLH+ +MP C FF G C ++C+Y H
Sbjct: 71 HAVSSSFNNLVCKHWLRSLCKKGEACEFLHE---RKMPECNFFVRNGYCSNGEECLYLHV 127
Query: 126 NED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ D I C ++ GFCP GP C +HV+
Sbjct: 128 DPDSKIPPCPHFENGFCPLGPTCSKKHVR 156
>gi|156849163|ref|XP_001647462.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
gi|156118148|gb|EDO19604.1| hypothetical protein Kpol_1018p142 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H + I++
Sbjct: 63 KIVCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFFSKNGFCTQTPECQYLHIDPLTRIEK 122
Query: 132 CNMYKLGFCPNGPDCRYRHV 151
C+ Y+ G+CP GP C RH+
Sbjct: 123 CSNYETGYCPLGPACTKRHI 142
>gi|403213908|emb|CCK68410.1| hypothetical protein KNAG_0A07570 [Kazachstania naganishii CBS
8797]
Length = 215
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ RMP C +F G C + DC Y H + I
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRRMPECVYFAKNGYCTQSPDCQYLHVDPQSRIPR 123
Query: 132 CNMYKLGFCPNGPDCRYRHVKLPG 155
C Y LGFC G C+ RHVK G
Sbjct: 124 CEYYDLGFCSEGAQCKNRHVKKNG 147
>gi|432094047|gb|ELK25839.1| YTH domain family protein 1, partial [Myotis davidii]
Length = 571
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 377 RVFIIKSYSEDDVHRSIKYSIWCSTEHGNKRLDGAFRSVGSKGPVYLLFSVNGSGHFCGV 436
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 437 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 492
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 493 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 533
>gi|365982035|ref|XP_003667851.1| hypothetical protein NDAI_0A04520 [Naumovozyma dairenensis CBS 421]
gi|343766617|emb|CCD22608.1| hypothetical protein NDAI_0A04520 [Naumovozyma dairenensis CBS 421]
Length = 333
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 12/153 (7%)
Query: 254 ATPLPQGI-----SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVI 305
+T +P I SR+F++KS N E+++ S G+W++ +L++AF + E +
Sbjct: 168 STIIPTWINIPDGSRFFVIKSINLEHIKKSFYNGIWSSTHFGNKRLSQAFKQLNQNEKIF 227
Query: 306 LIFSVNRTRHFQGCAKMTSKIGGSVGGGN-WKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
L FS N + F G A+M S I V + W+ YG+ F VKW + ++ +
Sbjct: 228 LFFSANGSGKFCGVAEMISNILSDVDTKDVWE---NNEKYGKAFKVKWTIVRDIHNKNLK 284
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
NP NE PV SRD QE+ IG + L
Sbjct: 285 RFLNPLNEMKPVTNSRDTQEIPFPIGHSMMKLF 317
>gi|387019967|gb|AFJ52101.1| YTH domain family protein 2-like [Crotalus adamanteus]
Length = 580
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 471
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 472 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 527
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 528 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 568
>gi|425779426|gb|EKV17487.1| YT521-B-like splicing factor, putative [Penicillium digitatum
PHI26]
gi|425784073|gb|EKV21872.1| Hypothetical protein PDIP_01870 [Penicillium digitatum Pd1]
Length = 406
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 253 NATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNR 312
N+ P + + RYFIVKS E+LELS Q G+WATQ NEA +N+AF++ ++V LIFS N+
Sbjct: 198 NSPPPARLVDRYFIVKSLTVEDLELSKQSGIWATQSHNEAAMNQAFETTDSVYLIFSANK 257
Query: 313 TRHFQGCAKMTSKIG 327
+ + G A+M S I
Sbjct: 258 SGEYFGYARMMSPIS 272
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYL 399
+G+ F ++W+ + F +TR LRNP+N N VKI+RD E+EP IG +L L +L
Sbjct: 350 FGKPFRIQWISTERVPFQRTRGLRNPWNANREVKIARDGTEIEPMIGRKLLQLFHL 405
>gi|407034648|gb|EKE37314.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 178
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN-EDIKEC 132
+ VC+HWLR +C KG C FLH+ D+ R P C F +G+C + +C +KH + + C
Sbjct: 36 KTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQKAIPC 95
Query: 133 NMYKLGFCPNGPDCRYRHV 151
YK GFC +G C++ HV
Sbjct: 96 EWYKRGFCKHGKKCKHGHV 114
>gi|358054281|dbj|GAA99207.1| hypothetical protein E5Q_05900 [Mixia osmundae IAM 14324]
Length = 310
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 60/122 (49%), Gaps = 10/122 (8%)
Query: 45 ANHAAPSSSGAAPDHAS------APVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQY 98
A HA P + H P+P GR + +T+C+HWL+ LC KG C FLH+
Sbjct: 65 ATHACPRGALCPLRHVRPSIRNFRPMPA-EGRGALSKTICKHWLKGLCKKGPGCEFLHEL 123
Query: 99 DKSRMPVCRFFRLFGECRE-QDCVYKHT--NEDIKECNMYKLGFCPNGPDCRYRHVKLPG 155
+ +MP C FF F C DC+Y H E +K+C Y GFC GP C +H +
Sbjct: 124 NMRKMPECWFFTQFRFCASGDDCMYLHLVEAERLKDCEAYTRGFCHLGPSCPDKHSRKTA 183
Query: 156 PP 157
P
Sbjct: 184 CP 185
>gi|340518147|gb|EGR48389.1| predicted protein [Trichoderma reesei QM6a]
Length = 433
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 243 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 302
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 303 HYDMGFCPLGPICSKKHVR 321
>gi|67483862|ref|XP_657151.1| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|56474390|gb|EAL51762.1| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449708917|gb|EMD48290.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 178
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN-EDIKEC 132
+ VC+HWLR +C KG C FLH+ D+ R P C F +G+C + +C +KH + + C
Sbjct: 36 KTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQKAIPC 95
Query: 133 NMYKLGFCPNGPDCRYRHV 151
YK GFC +G C++ HV
Sbjct: 96 EWYKRGFCKHGKKCKHGHV 114
>gi|395829334|ref|XP_003787815.1| PREDICTED: YTH domain family protein 1 [Otolemur garnettii]
Length = 559
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF SA + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDVHRSIKYSIWCSTEHGNKRLDSAFRSAGSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ + RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLDKAKQVLKII 523
>gi|344287155|ref|XP_003415320.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 2-like
[Loxodonta africana]
Length = 758
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 9/168 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 537 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 596
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 597 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 652
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGVN 425
RD QE+ +Q+ ++ Y S S + + EEE K V+
Sbjct: 653 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVKKVS 700
>gi|195062493|ref|XP_001996201.1| GH22368 [Drosophila grimshawi]
gi|193899696|gb|EDV98562.1| GH22368 [Drosophila grimshawi]
Length = 727
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 240 QNLPNGLPNQTNRNATPLPQGIS---RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
Q L + L ++ N N T + + R+F++KS + +++ S++ +W + +L++
Sbjct: 381 QILLDELKDKNNYNPTEIDLNKATSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDD 440
Query: 297 AFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKW 352
AF NV+L FSVN + HF G A+M + + + W + F VKW
Sbjct: 441 AFKERHKEGGNVLLFFSVNSSGHFCGMAQMMTSVDYNSTSTVW----SQDKWKGKFKVKW 496
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAA 412
+ + ++ K RH+R N+N V SRD QE+ + G ++ +L+ S + +
Sbjct: 497 IYVKDVPNGKLRHIRLENNDNKSVTNSRDTQEIPNTKGIEVLQILHSYRHSTSIFDDFSH 556
Query: 413 EAKREEEKAKGVNP 426
K++EE+ P
Sbjct: 557 YEKKQEEEVSSKRP 570
>gi|398406120|ref|XP_003854526.1| hypothetical protein MYCGRDRAFT_18787, partial [Zymoseptoria
tritici IPO323]
gi|339474409|gb|EGP89502.1| hypothetical protein MYCGRDRAFT_18787 [Zymoseptoria tritici IPO323]
Length = 143
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+YF++KS N N+ + + VW+TQ NE L +AF ++ VIL FSVN++ FQG A M
Sbjct: 4 KYFVIKSWNLANVHAAQRSSVWSTQTKNETLLTQAFRTSRQVILFFSVNKSMAFQGYALM 63
Query: 323 TSKIGGSVGGG------NWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN--- 373
TS S+ NW + F+++WL + F HL+N N +
Sbjct: 64 TSAPDSSIAKPDFCKKLNWDTSAA-------FTIRWLSTTSVPFRLVGHLKNRLNLDEQG 116
Query: 374 --LPVKISRDCQELEPSIGEQLAALL 397
PV I +D QE+ G+ + ++
Sbjct: 117 VARPVLIGKDGQEVCEEAGKGVVRVM 142
>gi|327289862|ref|XP_003229643.1| PREDICTED: YTH domain family protein 2-like [Anolis carolinensis]
Length = 581
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 413 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 472
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 473 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 528
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 529 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 569
>gi|195453685|ref|XP_002073895.1| GK12904 [Drosophila willistoni]
gi|194169980|gb|EDW84881.1| GK12904 [Drosophila willistoni]
Length = 723
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 11/198 (5%)
Query: 236 TTQMQNLPNGLPNQTNRNATPL---PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEA 292
T Q L L ++ N N T + +R+F++KS + +++ S++ +W +
Sbjct: 359 TVDPQLLLEELKDKNNYNPTEMDLEKATAARFFVIKSYSEDDIHRSIKYEIWCSTDHGNK 418
Query: 293 KLNEAFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNF 348
+L++AF N++L FSVN + HF G A+M + + + W + F
Sbjct: 419 RLDDAFKDRHKEGGNILLFFSVNGSGHFCGMAQMMTAVDYNSTSSVW----SQDKWKGKF 474
Query: 349 SVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAI 408
VKW+ + ++ K RH+R N+N V SRD QE+ + G ++ +L+ S +
Sbjct: 475 KVKWIYVKDVPNGKLRHIRLENNDNKSVTNSRDTQEVPNAKGIEVLQILHSYKHSTSIFD 534
Query: 409 SVAAEAKREEEKAKGVNP 426
+ K++EE+ P
Sbjct: 535 DFSHYEKKQEEEVSSKRP 552
>gi|358381473|gb|EHK19148.1| hypothetical protein TRIVIDRAFT_181899 [Trichoderma virens Gv29-8]
Length = 263
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 82 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 141
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 142 HYDMGFCPLGPLCSKKHVR 160
>gi|19851923|gb|AAL99921.1|AF432214_1 CLL-associated antigen KW-14 [Homo sapiens]
Length = 734
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 566 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 625
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 626 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 681
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 682 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 722
>gi|327271957|ref|XP_003220753.1| PREDICTED: YTH domain family protein 1-like isoform 2 [Anolis
carolinensis]
Length = 562
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 393 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 452
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 453 AEMKSSVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 508
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 509 RDTQEVPLEKAKQVLKII 526
>gi|242775690|ref|XP_002478691.1| YT521-B-like splicing factor, putative [Talaromyces stipitatus ATCC
10500]
gi|218722310|gb|EED21728.1| YT521-B-like splicing factor, putative [Talaromyces stipitatus ATCC
10500]
Length = 667
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 47/64 (73%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FIVKS E+LELS + G+WATQ NEA LN A++SA+NV LIFS N++ + G A+M
Sbjct: 419 RFFIVKSLTLEDLELSRRSGIWATQTHNEAALNRAYESADNVYLIFSANKSGEYFGYARM 478
Query: 323 TSKI 326
S I
Sbjct: 479 VSAI 482
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%)
Query: 328 GSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEP 387
G+ G A G +G+ F ++W+ L F++TR LRNP+N N VKI+RD E+EP
Sbjct: 577 GAAELGGEDLAAGGQTFGKPFRIEWISTERLPFYRTRGLRNPWNSNREVKIARDGTEIEP 636
Query: 388 SIGEQLAALLYLEPDS 403
S+G +L L ++ P +
Sbjct: 637 SVGRKLIQLFHIHPSA 652
>gi|61098206|ref|NP_001012851.1| YTH domain family protein 1 [Gallus gallus]
gi|60098909|emb|CAH65285.1| hypothetical protein RCJMB04_15d19 [Gallus gallus]
Length = 561
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDIHRSIKYTIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 508 RDTQEVHLEKAKQVLKII 525
>gi|345789810|ref|XP_543093.3| PREDICTED: YTH domain family protein 1 [Canis lupus familiaris]
Length = 768
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +A + V L+FSVN + HF G
Sbjct: 599 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRAASSKGPVYLLFSVNGSGHFCGV 658
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 659 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 714
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 715 RDTQEVPLEKAKQVLKII 732
>gi|327271955|ref|XP_003220752.1| PREDICTED: YTH domain family protein 1-like isoform 1 [Anolis
carolinensis]
Length = 560
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 391 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 450
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 451 AEMKSSVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 506
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 507 RDTQEVPLEKAKQVLKII 524
>gi|363742335|ref|XP_003642623.1| PREDICTED: YTH domain family protein 2-like [Gallus gallus]
Length = 556
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 388 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 447
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 448 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 503
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 504 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 544
>gi|358390563|gb|EHK39968.1| hypothetical protein TRIATDRAFT_302483 [Trichoderma atroviride IMI
206040]
Length = 272
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKEC 132
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 93 LVCKHWLRGLCKKGEQCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPC 152
Query: 133 NMYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 153 PHYDMGFCPLGPLCAKKHVR 172
>gi|343429546|emb|CBQ73119.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 997
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF-DSAEN--VILIFSVNRTRHFQG 318
+R+F++KS +++ S++ +WA+ +L++AF DSA N + L +SVN + HF G
Sbjct: 712 ARFFVIKSYTEDDVHKSLKYEIWASTDKGNQRLDKAFRDSAHNGPIYLFYSVNASGHFCG 771
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN-ENLPVK 377
A+M + + + W + F V+W+ + +L ++ RH+R E PV
Sbjct: 772 MAQMLTPLDYATSSNVWAQ---DGKWKGTFKVRWIYVKDLPNNQLRHIRLTNTPECKPVT 828
Query: 378 ISRDCQELEPSIGEQLAALL 397
SRD QEL P G ++ ++
Sbjct: 829 QSRDTQELTPEAGREVLRIM 848
>gi|310795354|gb|EFQ30815.1| hypothetical protein GLRG_05959 [Glomerella graminicola M1.001]
Length = 253
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG++C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 77 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHIDPQSKLPPCP 136
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C +HV+
Sbjct: 137 HYDKGFCPLGPRCSKKHVR 155
>gi|323350234|gb|EGA84381.1| Yth1p [Saccharomyces cerevisiae VL3]
Length = 193
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VCRHWLR LC K D C +LH+Y+ +MP C FF G C + DC Y H + I +
Sbjct: 64 KIVCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDCQYLHIDPASKIPK 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 124 CENYEMGFCPLGSSCPRRHIK 144
>gi|149635992|ref|XP_001506380.1| PREDICTED: YTH domain family protein 1 isoform 1 [Ornithorhynchus
anatinus]
Length = 561
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 508 RDTQEVPLEKAKQVLKII 525
>gi|449489150|ref|XP_002187216.2| PREDICTED: YTH domain family protein 2-like [Taeniopygia guttata]
Length = 523
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 355 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 414
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 415 AEMKSAVDYTTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 470
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 471 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 511
>gi|358337875|dbj|GAA56204.1| YTH domain family protein 2 [Clonorchis sinensis]
Length = 768
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+F++KS + +++ S++ VW + KL+ A+ A N + L FSVN + HF G
Sbjct: 599 ARFFVIKSFSEDDIHRSIKYSVWCSTELGNKKLDSAYVGANNQYPIYLFFSVNGSGHFCG 658
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+MTS++ W + FSV+W+ + ++ RH+R NEN PV
Sbjct: 659 MAEMTSRVDYDTRVRVW----AQDKWQGAFSVRWIFVKDVPNTALRHIRIESNENKPVTH 714
Query: 379 SRDCQELEPSIGEQLAALL 397
SRD EL G Q+ +
Sbjct: 715 SRDATELPLERGRQVMEVF 733
>gi|336272339|ref|XP_003350926.1| hypothetical protein SMAC_04231 [Sordaria macrospora k-hell]
gi|380090693|emb|CCC04863.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 692
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 253 NATPLPQGI----SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIF 308
N P P G+ RYF++KS E+LELSV+ VWATQ NE LN AF +A+N+ LIF
Sbjct: 422 NGGPAPNGMQGLKDRYFVLKSLTVEDLELSVRTKVWATQSHNEEVLNNAFKNADNIYLIF 481
Query: 309 SVNRTRHFQGCAKMTSKI 326
S N++ + G A+MTS I
Sbjct: 482 SANKSGEYFGYARMTSPI 499
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ FS++WL L F++TR LRNP+N N VKI+RD EL+P +G++L +L
Sbjct: 598 WGKPFSLEWLSTTRLPFYRTRGLRNPWNSNREVKIARDGTELQPGVGKKLISLF 651
>gi|449267779|gb|EMC78681.1| YTH domain family protein 2, partial [Columba livia]
Length = 505
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 9/167 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 340 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSTNGKGPVYLLFSVNGSGHFCGV 399
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 400 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 455
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGV 424
RD QE+ +Q+ ++ Y S S + + EEE K V
Sbjct: 456 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEEENVKKV 502
>gi|47086617|ref|NP_997878.1| YTH domain family protein 1 [Danio rerio]
gi|28422306|gb|AAH46885.1| YTH domain family, member 1 [Danio rerio]
Length = 614
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 430 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAINGKGPVYLLFSVNGSGHFCGV 489
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 490 AEMRSPVDYGTSAGVW----AQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNS 545
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 546 RDTQEVPLEKAKQVLKIIATYKHTTSIFDDFSHYEKRQEEE 586
>gi|194909092|ref|XP_001981889.1| GG12295 [Drosophila erecta]
gi|190656527|gb|EDV53759.1| GG12295 [Drosophila erecta]
Length = 700
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 240 QNLPNGLPNQTNRNATPL---PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
Q L + L ++ N N L G +R+F++KS + +++ S++ +W + +L++
Sbjct: 357 QLLLDELKDKNNYNPKALDLKKAGSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDD 416
Query: 297 AFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKW 352
AF N++L FSVN + HF G A+M + + + W + F VKW
Sbjct: 417 AFKERHEEGGNIMLFFSVNGSGHFCGMAQMMTAVDYNSTSSVW----SQDKWRGKFKVKW 472
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAA 412
+ + ++ K RH+R N+N V SRD QE+ G ++ +L+ S +
Sbjct: 473 IYVKDVPNGKLRHIRLENNDNKSVTNSRDTQEVPHDKGIEVLQILHSYNHSTSIFDDFFH 532
Query: 413 EAKREEEKAKGVNP 426
K++EE+ P
Sbjct: 533 YEKKQEEEVSSKRP 546
>gi|431891172|gb|ELK02049.1| YTH domain family protein 2 [Pteropus alecto]
Length = 576
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 8/172 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 404 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 463
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 464 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 519
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDNGGD 431
RD QE+ +Q+ ++ + + + KR+EE+ + V +NG +
Sbjct: 520 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE-ESVKKNNGSN 570
>gi|402853649|ref|XP_003891504.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 2 [Papio
anubis]
Length = 759
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 591 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 650
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 651 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 706
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 707 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 747
>gi|354472343|ref|XP_003498399.1| PREDICTED: YTH domain family protein 2-like [Cricetulus griseus]
Length = 601
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 433 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 492
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 493 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 548
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 549 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 593
>gi|157110396|ref|XP_001651085.1| YTH domain protein [Aedes aegypti]
gi|108878756|gb|EAT42981.1| AAEL005544-PA, partial [Aedes aegypti]
Length = 824
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 17/192 (8%)
Query: 242 LPNGLPNQTNRNATPLPQ----GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 297
+ N L N+ N N T L ++R+F++KS + +++ S++ +W + +L++A
Sbjct: 450 ILNQLQNKNNYNPTNLDMLETAHLARFFVIKSYSEDDIHRSIKYEIWCSTEHGNQRLDQA 509
Query: 298 FDSAEN----VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWL 353
+ E V L FSVN + HF G A+M + + + W + F V+W+
Sbjct: 510 YREREEKGGMVYLFFSVNGSGHFCGIAQMMTAVDYNSVSTVWS----QDKWKGTFKVRWI 565
Query: 354 KLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAI---SV 410
+ ++ + R +R NEN P+ SRD QE+ + G + AL + M+I +
Sbjct: 566 YVKDVPNAQLRQVRLENNENKPITNSRDTQEVPNAKG--IQALKIIHSFKHTMSIFDDFI 623
Query: 411 AAEAKREEEKAK 422
E ++ EE K
Sbjct: 624 HYEQRQLEENTK 635
>gi|4204265|gb|AAD10646.1| Hypothetical protein [Arabidopsis thaliana]
Length = 580
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQ 259
G N +N+G K + A ++ Q + T+ T LP+ + NR+ P+
Sbjct: 341 GLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVLPDR--EECNRDDFPVEY 398
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRT 313
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN +
Sbjct: 399 KDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQKSSGCPVFLFFSVNAS 458
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A+M + + W+ T +F +KW L ++ +H+ YNEN
Sbjct: 459 GQFIGLAEMKGPVDFNKNIEYWQQDKWTG----SFPLKWHILKDVPNSLLKHITLEYNEN 514
Query: 374 LPVKISRDCQELEPSIGEQLAALL 397
PV SRD QE++ G ++ +
Sbjct: 515 KPVTNSRDTQEVKLEQGLKVVKIF 538
>gi|443924052|gb|ELU43129.1| no arches protein [Rhizoctonia solani AG-1 IA]
Length = 287
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIKECNM 134
TVC+HWLR LC KGD C FLH+Y+ RMP C +F G C D C+Y H E EC
Sbjct: 94 TVCKHWLRGLCKKGDGCEFLHEYNLRRMPECWWFARHGTCTAGDECLYAHPKERKIECPD 153
Query: 135 YKLGFCPNG 143
Y+ GFC G
Sbjct: 154 YQRGFCKTG 162
>gi|334325516|ref|XP_001368230.2| PREDICTED: YTH domain family protein 3-like [Monodelphis domestica]
Length = 581
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 418 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 477
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 478 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 533
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 534 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 574
>gi|401882106|gb|EJT46379.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 2479]
gi|406700846|gb|EKD04008.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 8904]
Length = 324
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 63 PVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCV 121
P+P H R + TVC+H+LR+LC GD C + H ++ MP C +F G+C +C+
Sbjct: 80 PLPTHPREREKKTTVCKHYLRNLCKVGDNCEYTHDWNLRTMPTCVWFVKLGKCELGGECL 139
Query: 122 YKHTNEDIKECNMYKLGFCPNGPDCRYRHVK 152
Y H + EC Y GFC GP+C RHV+
Sbjct: 140 YYHPKDRRVECPDYNRGFCRLGPECPRRHVR 170
>gi|30424609|ref|NP_776122.1| YTH domain family protein 1 [Mus musculus]
gi|28380032|sp|P59326.1|YTHD1_MOUSE RecName: Full=YTH domain family protein 1; AltName:
Full=Dermatomyositis associated with cancer putative
autoantigen 1 homolog; Short=DACA-1 homolog
gi|26338351|dbj|BAC32861.1| unnamed protein product [Mus musculus]
gi|38181496|gb|AAH61479.1| Ythdf1 protein [Mus musculus]
gi|40674799|gb|AAH65050.1| YTH domain family 1 [Mus musculus]
gi|74192611|dbj|BAE43080.1| unnamed protein product [Mus musculus]
gi|148675413|gb|EDL07360.1| YTH domain family 1, isoform CRA_b [Mus musculus]
Length = 559
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|67078504|ref|NP_001019927.1| YTH domain family protein 1 [Rattus norvegicus]
gi|66910569|gb|AAH97360.1| YTH domain family, member 1 [Rattus norvegicus]
gi|149034000|gb|EDL88783.1| YTH domain family 1, isoform CRA_b [Rattus norvegicus]
Length = 559
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|334183345|ref|NP_001185241.1| uncharacterized protein [Arabidopsis thaliana]
gi|332195134|gb|AEE33255.1| uncharacterized protein [Arabidopsis thaliana]
Length = 592
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQ 259
G N +N+G K + A ++ Q + T+ T LP+ + NR+ P+
Sbjct: 341 GLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVLPDR--EECNRDDFPVEY 398
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRT 313
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN +
Sbjct: 399 KDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQKSSGCPVFLFFSVNAS 458
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A+M + + W+ T +F +KW L ++ +H+ YNEN
Sbjct: 459 GQFIGLAEMKGPVDFNKNIEYWQQDKWTG----SFPLKWHILKDVPNSLLKHITLEYNEN 514
Query: 374 LPVKISRDCQELEPSIGEQLAALL 397
PV SRD QE++ G ++ +
Sbjct: 515 KPVTNSRDTQEVKLEQGLKVVKIF 538
>gi|53127426|emb|CAG31096.1| hypothetical protein RCJMB04_2f5 [Gallus gallus]
Length = 561
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 508 RDTQEVPLEKAKQVLKII 525
>gi|440470290|gb|ELQ39365.1| hypothetical protein OOU_Y34scaffold00500g12 [Magnaporthe oryzae
Y34]
gi|440486749|gb|ELQ66587.1| hypothetical protein OOW_P131scaffold00377g12 [Magnaporthe oryzae
P131]
Length = 609
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Query: 247 PNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVIL 306
P +T+R+A PQ +YFI+KS E+LE S++ G+WATQ NE LN+A+++AE+V L
Sbjct: 350 PVETDRSA---PQK-EKYFILKSLTVEDLEQSIKTGIWATQAHNEKALNKAYETAESVYL 405
Query: 307 IFSVNRTRHFQGCAKMTSKI 326
IFS N++ + G A+MTS+I
Sbjct: 406 IFSANKSGEYFGYARMTSQI 425
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL + L F++TR +RNP+N N VKI+RD ELEPS+G +L L
Sbjct: 516 WGKPFQIEWLSVARLPFYRTRGIRNPWNSNREVKIARDGTELEPSVGRKLTGLF 569
>gi|336464161|gb|EGO52401.1| hypothetical protein NEUTE1DRAFT_125898 [Neurospora tetrasperma
FGSC 2508]
Length = 317
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDI 129
F VC+HWLR LC KG++C FLH+Y+ +MP C FF G C D C+Y H + +
Sbjct: 94 FGSLVCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRL 153
Query: 130 KECNMYKLGFCPNGPDCRYRHVK 152
C Y+ GFCP GP C +H +
Sbjct: 154 PPCPHYERGFCPLGPRCDKKHFR 176
>gi|432866642|ref|XP_004070904.1| PREDICTED: YTH domain family protein 1-like [Oryzias latipes]
Length = 610
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +S V L+FSVN + HF G
Sbjct: 430 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDTAFRAMNSKGPVYLLFSVNGSGHFCGV 489
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + S G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 490 AEMRSPVDYSTSAGVW----AQDKWKGKFDVNWLFVKDVPNSQLRHIRLENNDNKPVTNS 545
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 546 RDTQEVPLEKAKQVLKII 563
>gi|393212372|gb|EJC97872.1| hypothetical protein FOMMEDRAFT_23945 [Fomitiporia mediterranea
MF3/22]
Length = 1244
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 49/65 (75%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSV++GVWATQ NEA LN+AF ++ +V LIF VN++ F G A+M
Sbjct: 780 RYFILKSLTQFDLDLSVEKGVWATQPHNEAILNQAFRNSSDVYLIFGVNKSGEFFGYARM 839
Query: 323 TSKIG 327
S IG
Sbjct: 840 ASAIG 844
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G F V+W+++ L FH+TRHLRNP+N + VK+SRD ELEP +G+ L
Sbjct: 1124 WGSPFKVQWIRVTRLPFHRTRHLRNPWNHDREVKVSRDGTELEPLVGQAL 1173
>gi|367052203|ref|XP_003656480.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
gi|347003745|gb|AEO70144.1| hypothetical protein THITE_2057738 [Thielavia terrestris NRRL 8126]
Length = 281
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C D C+Y H + + C
Sbjct: 93 VCKHWLRGLCKKGETCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSRLPPCP 152
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y+ GFCP GP C +HV+
Sbjct: 153 HYERGFCPLGPRCDKKHVR 171
>gi|350296243|gb|EGZ77220.1| hypothetical protein NEUTE2DRAFT_99830 [Neurospora tetrasperma FGSC
2509]
Length = 312
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDI 129
F VC+HWLR LC KG++C FLH+Y+ +MP C FF G C D C+Y H + +
Sbjct: 94 FGSLVCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRL 153
Query: 130 KECNMYKLGFCPNGPDCRYRHVK 152
C Y+ GFCP GP C +H +
Sbjct: 154 PPCPHYERGFCPLGPRCDKKHFR 176
>gi|85117432|ref|XP_965256.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
gi|74618745|sp|Q7SGR2.1|YTH1_NEUCR RecName: Full=mRNA 3'-end-processing protein yth-1
gi|28927062|gb|EAA36020.1| hypothetical protein NCU08353 [Neurospora crassa OR74A]
Length = 317
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDI 129
F VC+HWLR LC KG++C FLH+Y+ +MP C FF G C D C+Y H + +
Sbjct: 94 FGSLVCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRL 153
Query: 130 KECNMYKLGFCPNGPDCRYRHVK 152
C Y+ GFCP GP C +H +
Sbjct: 154 PPCPHYERGFCPLGPRCDKKHFR 176
>gi|326931943|ref|XP_003212083.1| PREDICTED: YTH domain family protein 1-like, partial [Meleagris
gallopavo]
Length = 552
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 383 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 442
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 443 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 498
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 499 RDTQEVPLEKAKQVLKII 516
>gi|74197981|dbj|BAE35173.1| unnamed protein product [Mus musculus]
Length = 579
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|389626459|ref|XP_003710883.1| hypothetical protein MGG_04621 [Magnaporthe oryzae 70-15]
gi|351650412|gb|EHA58271.1| hypothetical protein MGG_04621 [Magnaporthe oryzae 70-15]
Length = 630
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 58/80 (72%), Gaps = 4/80 (5%)
Query: 247 PNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVIL 306
P +T+R+A PQ +YFI+KS E+LE S++ G+WATQ NE LN+A+++AE+V L
Sbjct: 371 PVETDRSA---PQK-EKYFILKSLTVEDLEQSIKTGIWATQAHNEKALNKAYETAESVYL 426
Query: 307 IFSVNRTRHFQGCAKMTSKI 326
IFS N++ + G A+MTS+I
Sbjct: 427 IFSANKSGEYFGYARMTSQI 446
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL + L F++TR +RNP+N N VKI+RD ELEPS+G +L L
Sbjct: 537 WGKPFQIEWLSVARLPFYRTRGIRNPWNSNREVKIARDGTELEPSVGRKLTGLF 590
>gi|355729608|gb|AES09925.1| YTH domain family, member 2 [Mustela putorius furo]
Length = 562
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 395 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 454
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 455 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 510
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 511 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 555
>gi|334183343|ref|NP_001185240.1| uncharacterized protein [Arabidopsis thaliana]
gi|332195133|gb|AEE33254.1| uncharacterized protein [Arabidopsis thaliana]
Length = 599
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQ 259
G N +N+G K + A ++ Q + T+ T LP+ + NR+ P+
Sbjct: 354 GLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVLPDR--EECNRDDFPVEY 411
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRT 313
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN +
Sbjct: 412 KDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQKSSGCPVFLFFSVNAS 471
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A+M + + W+ T +F +KW L ++ +H+ YNEN
Sbjct: 472 GQFIGLAEMKGPVDFNKNIEYWQQDKWTG----SFPLKWHILKDVPNSLLKHITLEYNEN 527
Query: 374 LPVKISRDCQELEPSIGEQLAALL 397
PV SRD QE++ G ++ +
Sbjct: 528 KPVTNSRDTQEVKLEQGLKVVKIF 551
>gi|47223342|emb|CAG04203.1| unnamed protein product [Tetraodon nigroviridis]
Length = 587
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + + L+FSVN + HF G
Sbjct: 422 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAYHSLGSKGPLYLLFSVNGSGHFCGV 481
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 482 AEMRSPVDYNAFAGVWS----QDKWKGKFEVKWIFIKDVPNNQLRHIRLENNDNKPVTNS 537
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 538 RDTQEVPLEKAKQVLRIIATYKHTTSIFDDFAHYEKRQEEE 578
>gi|355762535|gb|EHH62000.1| hypothetical protein EGM_20168, partial [Macaca fascicularis]
Length = 571
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 403 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 462
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 463 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 518
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 519 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 563
>gi|355557747|gb|EHH14527.1| hypothetical protein EGK_00469, partial [Macaca mulatta]
Length = 561
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 393 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 452
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 453 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 508
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 509 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 553
>gi|18405397|ref|NP_564692.1| uncharacterized protein [Arabidopsis thaliana]
gi|15215792|gb|AAK91441.1| At1g55500/T5A14_10 [Arabidopsis thaliana]
gi|25090204|gb|AAN72251.1| At1g55500/T5A14_10 [Arabidopsis thaliana]
gi|332195132|gb|AEE33253.1| uncharacterized protein [Arabidopsis thaliana]
Length = 549
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 12/204 (5%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQ 259
G N +N+G K + A ++ Q + T+ T LP+ + NR+ P+
Sbjct: 298 GLNELNRGPRAKGTKATEEVSSEEVKKQTFDESNTEETVTCVLPDR--EECNRDDFPVEY 355
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRT 313
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN +
Sbjct: 356 KDAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYQEAQQKSSGCPVFLFFSVNAS 415
Query: 314 RHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN 373
F G A+M + + W+ T +F +KW L ++ +H+ YNEN
Sbjct: 416 GQFIGLAEMKGPVDFNKNIEYWQQDKWTG----SFPLKWHILKDVPNSLLKHITLEYNEN 471
Query: 374 LPVKISRDCQELEPSIGEQLAALL 397
PV SRD QE++ G ++ +
Sbjct: 472 KPVTNSRDTQEVKLEQGLKVVKIF 495
>gi|351695937|gb|EHA98855.1| YTH domain family protein 2, partial [Heterocephalus glaber]
Length = 564
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 403 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 462
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 463 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 518
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 519 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 563
>gi|348570720|ref|XP_003471145.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 2-like
[Cavia porcellus]
Length = 611
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 429 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 488
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 489 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 544
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 545 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 589
>gi|347970702|ref|XP_310378.7| AGAP003817-PA [Anopheles gambiae str. PEST]
gi|333466793|gb|EAA05969.5| AGAP003817-PA [Anopheles gambiae str. PEST]
Length = 910
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 82/167 (49%), Gaps = 9/167 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRHF 316
++R+F++KS + +++ S++ +W + +L++AF E V L FSVN + HF
Sbjct: 482 LARFFVIKSYSEDDIHRSIKYEIWCSTEHGNQRLDQAFREREEKGGTVYLFFSVNGSGHF 541
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M + + + W + F V+W+ + ++ RH+R NEN +
Sbjct: 542 CGVAQMMTAVDYNSNSSVWS----QDKWKGTFKVRWIYVKDVPNSHLRHIRLENNENKSM 597
Query: 377 KISRDCQELEPSIGEQLAALLY-LEPDSELMAISVAAEAKREEEKAK 422
SRD QE+ + G Q+ +++ E S + E ++ EE +
Sbjct: 598 TNSRDTQEVPNAKGIQVLQIIHSFEHQSSIFDDFQHYEKRQMEEDTR 644
>gi|449279468|gb|EMC87049.1| YTH domain family protein 3, partial [Columba livia]
Length = 564
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 397 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 456
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 457 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 512
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 513 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 553
>gi|357617015|gb|EHJ70536.1| hypothetical protein KGM_09287 [Danaus plexippus]
Length = 630
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 17/206 (8%)
Query: 246 LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-- 303
+ N+ N L +R+F++KS + +++ S++ +W + +L+ A+ E
Sbjct: 320 VKNEYNPKEFDLSAPNARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDAAYRDREREG 379
Query: 304 --VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 361
V L FSVN + HF G A+M S + + W + F V+W+ + ++
Sbjct: 380 GAVYLFFSVNGSGHFCGMARMISAVDYNSNSSVW----SQDKWKGQFRVRWIYVKDVPNV 435
Query: 362 KTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDS-ELMAISVAAEAKREEEK 420
+ R+++ NEN PV SRD QE+ + G Q+ +++ S + + E ++EEE
Sbjct: 436 QLRYIKLENNENKPVTNSRDTQEVPHAKGLQVLRIMHSYCHSTSIFDDFIHYERRQEEED 495
Query: 421 AKGVNPDNGGDNPDIVPFEDNEEEEE 446
++ V P P ++N EE E
Sbjct: 496 SRKV--------PHHNPQDNNREEHE 513
>gi|194224634|ref|XP_001492603.2| PREDICTED: YTH domain family protein 1 [Equus caballus]
Length = 606
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 437 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 496
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 497 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 552
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 553 RDTQEVPLEKAKQVLKII 570
>gi|395826008|ref|XP_003786212.1| PREDICTED: LOW QUALITY PROTEIN: putative cleavage and
polyadenylation specificity factor subunit 4-like
protein [Otolemur garnettii]
Length = 166
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 7 GLSFDFEGGLDAGPGMPTASNPAIQSDSTAAAAAAAANANHAAPSSSGAAPDHASAPVPH 66
G +F F+ ++ G T P D + +A + + G P H
Sbjct: 10 GFTFAFKKDVEMQKG--TGLLPFQGMDKSGSAVCNSF--------AKGLCKKGKLCPFWH 59
Query: 67 HSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN 126
R + VC+HW R LC KGD CG LHQ + +RMP F+ FG+C + C + H
Sbjct: 60 ---ERREKXLVCKHWRRELCKKGDHCGSLHQCNIARMPQRYFYSKFGDCNNKQCPFLHVK 116
Query: 127 EDIK--ECNMYKLGFCPNGPDCRYRHV 151
+ +C Y GFC NGP C+YRHV
Sbjct: 117 PAFRSQDCPWYDQGFCQNGPLCKYRHV 143
>gi|335290848|ref|XP_003356306.1| PREDICTED: YTH domain family protein 2-like isoform 1 [Sus scrofa]
Length = 580
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 471
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 472 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 527
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 528 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 568
>gi|167377692|ref|XP_001734501.1| mRNA 3'-end-processing protein YTH1 [Entamoeba dispar SAW760]
gi|165903960|gb|EDR29338.1| mRNA 3'-end-processing protein YTH1, putative [Entamoeba dispar
SAW760]
Length = 166
Score = 79.0 bits (193), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTN-EDIKEC 132
+ VC+HWLR +C KG C FLH+ D+ R P C F +G+C + +C +KH + + C
Sbjct: 24 KTIVCQHWLRGMCRKGANCDFLHRLDEERTPACHHFVKYGKCEKPECPFKHEDPQKAIPC 83
Query: 133 NMYKLGFCPNGPDCRYRHV 151
YK GFC +G C++ HV
Sbjct: 84 EWYKRGFCKHGKKCKHGHV 102
>gi|417402966|gb|JAA48310.1| Hypothetical protein [Desmodus rotundus]
Length = 580
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 471
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 472 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 527
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 528 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 572
>gi|440907572|gb|ELR57706.1| YTH domain family protein 2, partial [Bos grunniens mutus]
Length = 565
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 404 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 463
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 464 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 519
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 520 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 564
>gi|350296723|gb|EGZ77700.1| hypothetical protein NEUTE2DRAFT_100873 [Neurospora tetrasperma
FGSC 2509]
Length = 479
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 249 QTNRNATPLPQGIS----RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+T NA P+ ++ RYF++KS E+LELSV+ VWATQ NE LN AF +A+NV
Sbjct: 197 ETKSNAAPVIHDMAVQKDRYFVLKSLTVEDLELSVRTKVWATQSHNEETLNNAFKNADNV 256
Query: 305 ILIFSVNRTRHFQGCAKMTSKI 326
LIFS N++ + G A+MTS I
Sbjct: 257 YLIFSANKSGEYFGYARMTSSI 278
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++W+ L F++TR LRNP+N N VKI+RD EL+P +G +L +L
Sbjct: 377 WGKPFRLEWVSTIRLPFYRTRGLRNPWNSNREVKIARDGTELQPVVGRKLISLF 430
>gi|296207262|ref|XP_002750567.1| PREDICTED: YTH domain family protein 2 [Callithrix jacchus]
Length = 579
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|326489527|dbj|BAK01744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 642
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 14/169 (8%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ + + L+FSVN +
Sbjct: 383 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNRKLDAAYREVKEKEEHYPIFLLFSVNASAQ 442
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+MT + W+ T F VKW + ++ + RH+ NEN P
Sbjct: 443 FCGVAEMTGPVNFDKSVEYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNENKP 498
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGV 424
V SRD QE++ G ++ + D +S+ + EE+ K +
Sbjct: 499 VTNSRDTQEVKLEQGLEMLKIFKDHEDD----VSILDDFDFYEEREKAL 543
>gi|194207801|ref|XP_001500383.2| PREDICTED: YTH domain family protein 2-like isoform 1 [Equus
caballus]
Length = 580
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 471
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 472 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 527
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 528 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 572
>gi|395506683|ref|XP_003757660.1| PREDICTED: YTH domain family protein 1 [Sarcophilus harrisii]
Length = 771
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 602 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 661
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 662 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 717
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 718 RDTQEVPLEKAKQVLKII 735
>gi|115495775|ref|NP_001069721.1| YTH domain family protein 2 [Bos taurus]
gi|122143522|sp|Q0VCZ3.1|YTHD2_BOVIN RecName: Full=YTH domain family protein 2
gi|111304639|gb|AAI19921.1| YTH domain family, member 2 [Bos taurus]
gi|296490025|tpg|DAA32138.1| TPA: YTH domain family protein 2 [Bos taurus]
Length = 580
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 412 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 471
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 472 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 527
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 528 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 572
>gi|20809771|gb|AAH28994.1| YTH domain family 2 [Mus musculus]
Length = 579
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|413957047|gb|AFW89696.1| hypothetical protein ZEAMMB73_168477 [Zea mays]
Length = 702
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------V 304
NR+ P+ +++F++KS + +++ SV+ VWA+ + KL+ A+ A++ +
Sbjct: 443 NRDDFPVQYDAAKFFVIKSYSEDDIHKSVKYNVWASTTNGNKKLDAAYQEAQSKGSACPI 502
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
L FSVN + F G A+MT + W+ + +FSVKW + ++ + +
Sbjct: 503 FLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSFSVKWHIVKDVPNNILK 558
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
H+ NEN PV SRD QE+ G Q+ +
Sbjct: 559 HIILENNENKPVTNSRDTQEIRLEQGLQMLKIF 591
>gi|115389084|ref|XP_001212047.1| predicted protein [Aspergillus terreus NIH2624]
gi|114194443|gb|EAU36143.1| predicted protein [Aspergillus terreus NIH2624]
Length = 632
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFIVKS E+LE S + GVWATQ NE LNEA+++A+NV LIFS N++ + G A+M
Sbjct: 426 RYFIVKSLTVEDLEHSRRSGVWATQSHNEIALNEAYETADNVYLIFSANKSGEYYGYARM 485
Query: 323 TSKI 326
S I
Sbjct: 486 MSPI 489
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 348 FSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
F ++W + FH+TR LRNP+N N VKI+RD E+EPS+GE+L L +
Sbjct: 577 FRIQWCSTERVPFHRTRGLRNPWNANREVKIARDGTEIEPSVGERLIQLFH 627
>gi|301789107|ref|XP_002929970.1| PREDICTED: YTH domain family protein 2-like, partial [Ailuropoda
melanoleuca]
Length = 578
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 533 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 573
>gi|149024121|gb|EDL80618.1| YTH domain family 2 (predicted) [Rattus norvegicus]
gi|183986012|gb|AAI66407.1| Ythdf2 protein [Rattus norvegicus]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|397515837|ref|XP_003828149.1| PREDICTED: YTH domain family protein 2 [Pan paniscus]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|395522100|ref|XP_003765078.1| PREDICTED: YTH domain family protein 2 [Sarcophilus harrisii]
Length = 582
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 414 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 473
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 474 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 529
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 530 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEENVK 574
>gi|322711967|gb|EFZ03540.1| Zinc finger CCCH type domain containing protein [Metarhizium
anisopliae ARSEF 23]
Length = 277
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 80 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPSSRLPPCP 139
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 140 HYDMGFCPLGPLCSKKHVR 158
>gi|116812575|ref|NP_057342.2| YTH domain family protein 2 isoform 1 [Homo sapiens]
gi|290542345|ref|NP_001166599.1| YTH domain family protein 2 isoform 1 [Homo sapiens]
gi|388454482|ref|NP_001252855.1| YTH domain family protein 2 [Macaca mulatta]
gi|114555142|ref|XP_001154190.1| PREDICTED: YTH domain family protein 2 isoform 5 [Pan troglodytes]
gi|332245228|ref|XP_003271764.1| PREDICTED: YTH domain family protein 2 isoform 1 [Nomascus
leucogenys]
gi|41019527|sp|Q9Y5A9.2|YTHD2_HUMAN RecName: Full=YTH domain family protein 2; AltName:
Full=CLL-associated antigen KW-14; AltName:
Full=High-glucose-regulated protein 8; AltName:
Full=Renal carcinoma antigen NY-REN-2
gi|12803469|gb|AAH02559.1| YTH domain family, member 2 [Homo sapiens]
gi|119628078|gb|EAX07673.1| YTH domain family, member 2, isoform CRA_a [Homo sapiens]
gi|119628079|gb|EAX07674.1| YTH domain family, member 2, isoform CRA_a [Homo sapiens]
gi|123982684|gb|ABM83083.1| YTH domain family, member 2 [synthetic construct]
gi|123997353|gb|ABM86278.1| YTH domain family, member 2 [synthetic construct]
gi|158258599|dbj|BAF85270.1| unnamed protein product [Homo sapiens]
gi|380813548|gb|AFE78648.1| YTH domain family protein 2 isoform 1 [Macaca mulatta]
gi|383418983|gb|AFH32705.1| YTH domain family protein 2 isoform 1 [Macaca mulatta]
gi|384940038|gb|AFI33624.1| YTH domain family protein 2 isoform 1 [Macaca mulatta]
gi|410215912|gb|JAA05175.1| YTH domain family, member 2 [Pan troglodytes]
gi|410254004|gb|JAA14969.1| YTH domain family, member 2 [Pan troglodytes]
gi|410291574|gb|JAA24387.1| YTH domain family, member 2 [Pan troglodytes]
gi|410336587|gb|JAA37240.1| YTH domain family, member 2 [Pan troglodytes]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|409042086|gb|EKM51570.1| hypothetical protein PHACADRAFT_101811 [Phanerochaete carnosa
HHB-10118-sp]
Length = 864
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSV++G+WATQR NE L++A+ ++++V LIF VN++ F GCA+M
Sbjct: 572 RYFILKSLTQYDLDLSVEKGLWATQRHNEGILDQAYRTSKDVYLIFGVNKSGEFYGCARM 631
Query: 323 TSKI 326
+
Sbjct: 632 AGPV 635
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 38/50 (76%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G +F V+W++ L F++TRHLRNP+N + VK+SRD ELEPS+G+ L
Sbjct: 786 WGESFQVEWIRTDSLPFYRTRHLRNPWNHDREVKVSRDGTELEPSVGQAL 835
>gi|403293298|ref|XP_003937656.1| PREDICTED: YTH domain family protein 2 [Saimiri boliviensis
boliviensis]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|310793290|gb|EFQ28751.1| hypothetical protein GLRG_03895 [Glomerella graminicola M1.001]
Length = 644
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELSV+ G+WATQ NE LN AF++ +NV L+FS N++ + G A+M
Sbjct: 404 KFFILKSLTVEDLELSVRTGIWATQSHNEETLNSAFNAVDNVYLVFSANKSGEYFGYARM 463
Query: 323 TSKI 326
TS+I
Sbjct: 464 TSQI 467
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 333 GNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQ 392
GN + T +G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +
Sbjct: 546 GNQEVDGTTKAWGKPFKLEWLSTARLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRR 605
Query: 393 LAALL 397
L L
Sbjct: 606 LIGLF 610
>gi|291399445|ref|XP_002716118.1| PREDICTED: high glucose-regulated protein 8 isoform 1 [Oryctolagus
cuniculus]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|126303036|ref|XP_001376293.1| PREDICTED: YTH domain family protein 1-like [Monodelphis domestica]
Length = 652
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 483 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSLNSKGPVYLLFSVNGSGHFCGV 542
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 543 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 598
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 599 RDTQEVPLEKAKQVLKII 616
>gi|225543110|ref|NP_663368.3| YTH domain family protein 2 [Mus musculus]
gi|15928654|gb|AAH14797.1| YTH domain family 2 [Mus musculus]
gi|26327473|dbj|BAC27480.1| unnamed protein product [Mus musculus]
gi|26350823|dbj|BAC39048.1| unnamed protein product [Mus musculus]
gi|74177904|dbj|BAE29751.1| unnamed protein product [Mus musculus]
gi|74191575|dbj|BAE30361.1| unnamed protein product [Mus musculus]
gi|74202144|dbj|BAE30751.1| unnamed protein product [Mus musculus]
gi|74219419|dbj|BAE29487.1| unnamed protein product [Mus musculus]
gi|148698173|gb|EDL30120.1| YTH domain family 2 [Mus musculus]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|340376608|ref|XP_003386824.1| PREDICTED: YTH domain family protein 2-like [Amphimedon
queenslandica]
Length = 282
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 89/178 (50%), Gaps = 8/178 (4%)
Query: 246 LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-- 303
L N N + + +R+F++KS +++ S++ VW + +L+ AF ++
Sbjct: 83 LENNYNPSELTINMNNARFFVIKSYAEDDVHRSIKYNVWCSTDHGNRRLDTAFKEQKSKG 142
Query: 304 --VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFH 361
V L+FSVN + HF G A+M S++ S G W GR F ++W+ + ++ +
Sbjct: 143 GGVYLLFSVNGSGHFCGVAQMMSEVELSTDTGIWTQDKWK---GR-FDIRWIYVKDVPNN 198
Query: 362 KTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEE 419
+ RH+R NEN PV SRD QE+ G+ + +++ + + KR+EE
Sbjct: 199 QLRHIRLENNENKPVTNSRDTQEVPVDKGKLVIKIIHSYQHTTSIFDDFEHYEKRQEE 256
>gi|293336053|ref|NP_001169286.1| uncharacterized protein LOC100383150 [Zea mays]
gi|224028423|gb|ACN33287.1| unknown [Zea mays]
gi|413957046|gb|AFW89695.1| hypothetical protein ZEAMMB73_168477 [Zea mays]
Length = 701
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 10/153 (6%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------V 304
NR+ P+ +++F++KS + +++ SV+ VWA+ + KL+ A+ A++ +
Sbjct: 442 NRDDFPVQYDAAKFFVIKSYSEDDIHKSVKYNVWASTTNGNKKLDAAYQEAQSKGSACPI 501
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
L FSVN + F G A+MT + W+ + +FSVKW + ++ + +
Sbjct: 502 FLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSFSVKWHIVKDVPNNILK 557
Query: 365 HLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
H+ NEN PV SRD QE+ G Q+ +
Sbjct: 558 HIILENNENKPVTNSRDTQEIRLEQGLQMLKIF 590
>gi|301755132|ref|XP_002913416.1| PREDICTED: YTH domain family protein 2-like [Ailuropoda
melanoleuca]
Length = 586
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 418 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 477
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 478 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 533
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 534 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 578
>gi|148675412|gb|EDL07359.1| YTH domain family 1, isoform CRA_a [Mus musculus]
Length = 586
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|26330093|dbj|BAC28785.1| unnamed protein product [Mus musculus]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|443894375|dbj|GAC71723.1| aminopeptidase I zinc metalloprotease [Pseudozyma antarctica T-34]
Length = 960
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF-DSAEN--VILIFSVNRTRHFQG 318
+R+F++KS E++ S++ +WA+ +L++AF +SA N + L +SVN + HF G
Sbjct: 711 ARFFVIKSYTEEDVHKSLKYEIWASTDKGNQRLDKAFRESASNGPIYLFYSVNASGHFCG 770
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN-ENLPVK 377
A+M + + + W + F V+W+ + +L ++ RH+R E PV
Sbjct: 771 MAQMLTPLDYATSSNVWAQ---DGKWKGTFKVRWIYVKDLPNNQLRHIRLTNTPECKPVT 827
Query: 378 ISRDCQELEPSIGEQLAALL 397
SRD QEL P G ++ ++
Sbjct: 828 QSRDTQELTPEAGREVLRIM 847
>gi|395856820|ref|XP_003800816.1| PREDICTED: YTH domain family protein 2 [Otolemur garnettii]
Length = 578
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 410 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 469
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 470 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 525
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 526 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 570
>gi|281351641|gb|EFB27225.1| hypothetical protein PANDA_001208 [Ailuropoda melanoleuca]
Length = 556
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 395 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 454
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 455 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 510
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 511 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 555
>gi|75076002|sp|Q4R5D9.1|YTHD2_MACFA RecName: Full=YTH domain family protein 2
gi|67970688|dbj|BAE01686.1| unnamed protein product [Macaca fascicularis]
Length = 579
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|367018548|ref|XP_003658559.1| hypothetical protein MYCTH_16224, partial [Myceliophthora
thermophila ATCC 42464]
gi|347005826|gb|AEO53314.1| hypothetical protein MYCTH_16224, partial [Myceliophthora
thermophila ATCC 42464]
Length = 253
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR LC KG+AC FLH+Y+ +MP C FF G C D C+Y H + + C
Sbjct: 81 VCKHWLRGLCKKGEACEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSRLPPCP 140
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y+ GFCP GP C +HV+
Sbjct: 141 HYERGFCPLGPRCDKKHVR 159
>gi|322702104|gb|EFY93852.1| Zinc finger CCCH type domain containing protein [Metarhizium
acridum CQMa 102]
Length = 276
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 80 VCKHWLRGLCKKGEHCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPSSRLPPCP 139
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 140 HYDMGFCPLGPLCSKKHVR 158
>gi|121711205|ref|XP_001273218.1| YT521-B-like splicing factor, putative [Aspergillus clavatus NRRL
1]
gi|119401369|gb|EAW11792.1| YT521-B-like splicing factor, putative [Aspergillus clavatus NRRL
1]
Length = 530
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 46/66 (69%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCA 320
+SRYF+VKS +LELS Q G+WATQ NE LN AF+SA NV LIFS N++ + G A
Sbjct: 280 LSRYFVVKSLTVGDLELSRQSGIWATQSHNEVNLNRAFESAPNVYLIFSANKSGEYYGYA 339
Query: 321 KMTSKI 326
+M S I
Sbjct: 340 RMMSPI 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 345 GRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEP 401
GR F V+WL + FH+TR LRNP+N N VKI+RD E+EPS+GE+L L + P
Sbjct: 460 GRPFRVQWLSAERVPFHRTRGLRNPWNANREVKIARDGTEIEPSVGERLIQLFHTRP 516
>gi|164422785|ref|XP_963775.2| hypothetical protein NCU09365 [Neurospora crassa OR74A]
gi|157069820|gb|EAA34539.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 471
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 249 QTNRNATPLPQGIS----RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+T NA P+ ++ RYF++KS E+LELSV+ VWATQ NE LN AF +A+NV
Sbjct: 197 ETKSNAAPVIHDMAVQRDRYFVLKSLTVEDLELSVRTKVWATQSHNEETLNNAFKNADNV 256
Query: 305 ILIFSVNRTRHFQGCAKMTSKI 326
LIFS N++ + G A+MTS I
Sbjct: 257 YLIFSANKSGEYFGYARMTSSI 278
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++W+ L F++TR LRNP+N N VKI+RD EL+P +G +L +L
Sbjct: 377 WGKPFRLEWVSTIRLPFYRTRGLRNPWNSNREVKIARDGTELQPVVGRKLISLF 430
>gi|344245048|gb|EGW01152.1| YTH domain family protein 2 [Cricetulus griseus]
Length = 529
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 361 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 420
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 421 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 476
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 477 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 521
>gi|410966611|ref|XP_003989824.1| PREDICTED: YTH domain family protein 2 [Felis catus]
Length = 530
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 362 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 421
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 422 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 477
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 478 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 522
>gi|453082222|gb|EMF10270.1| hypothetical protein SEPMUDRAFT_151254 [Mycosphaerella populorum
SO2202]
Length = 585
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 8/87 (9%)
Query: 250 TNRNATPLPQG--------ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSA 301
T+R T P+G +Y+IVKS ++LE SV+ G+WATQ NE LN A++ A
Sbjct: 349 TSRAITANPEGPPQSDEKVAEKYYIVKSLTAQDLEASVRNGIWATQSHNEQTLNRAYEQA 408
Query: 302 ENVILIFSVNRTRHFQGCAKMTSKIGG 328
ENV LIFS N++ + G A+M S+I G
Sbjct: 409 ENVYLIFSANKSGEYFGYARMASQISG 435
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G++L + +
Sbjct: 511 WGKQFQIEWLSTSRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGQRLVQMFH 565
>gi|449486272|ref|XP_002194443.2| PREDICTED: YTH domain family protein 1 isoform 1 [Taeniopygia
guttata]
gi|449486274|ref|XP_004177115.1| PREDICTED: YTH domain family protein 1 isoform 2 [Taeniopygia
guttata]
Length = 511
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 342 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRSMNSKGPVYLLFSVNGSGHFCGV 401
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 402 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 457
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 458 RDTQEVPLEKAKQVLKII 475
>gi|345794377|ref|XP_535336.3| PREDICTED: YTH domain family protein 2 [Canis lupus familiaris]
Length = 530
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 362 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 421
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 422 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 477
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 478 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 522
>gi|417402984|gb|JAA48319.1| Hypothetical protein [Desmodus rotundus]
Length = 582
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 533 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 573
>gi|336464626|gb|EGO52866.1| hypothetical protein NEUTE1DRAFT_91617 [Neurospora tetrasperma FGSC
2508]
Length = 513
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 249 QTNRNATPLPQGIS----RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENV 304
+T NA P+ ++ RYF++KS E+LELSV+ VWATQ NE LN AF +A+NV
Sbjct: 197 ETKSNAAPVIHDMAVQRDRYFVLKSLTVEDLELSVRTKVWATQSHNEETLNNAFKNADNV 256
Query: 305 ILIFSVNRTRHFQGCAKMTSKI 326
LIFS N++ + G A+MTS I
Sbjct: 257 YLIFSANKSGEYFGYARMTSSI 278
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++W+ L F++TR LRNP+N N VKI+RD EL+P +G +L +L
Sbjct: 377 WGKPFRLEWVSTIRLPFYRTRGLRNPWNSNREVKIARDGTELQPVVGRKLISLF 430
>gi|149033999|gb|EDL88782.1| YTH domain family 1, isoform CRA_a [Rattus norvegicus]
Length = 586
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|291399447|ref|XP_002716119.1| PREDICTED: high glucose-regulated protein 8 isoform 2 [Oryctolagus
cuniculus]
Length = 529
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 361 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 420
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 421 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 476
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 477 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 521
>gi|290543591|ref|NP_001166299.1| YTH domain family protein 2 isoform 2 [Homo sapiens]
gi|114555148|ref|XP_001153998.1| PREDICTED: YTH domain family protein 2 isoform 2 [Pan troglodytes]
gi|332245230|ref|XP_003271765.1| PREDICTED: YTH domain family protein 2 isoform 2 [Nomascus
leucogenys]
gi|119628080|gb|EAX07675.1| YTH domain family, member 2, isoform CRA_b [Homo sapiens]
gi|194383616|dbj|BAG64779.1| unnamed protein product [Homo sapiens]
Length = 529
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 361 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 420
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 421 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 476
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 477 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 521
>gi|348588490|ref|XP_003479999.1| PREDICTED: YTH domain family protein 3-like [Cavia porcellus]
Length = 582
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 533 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 573
>gi|335290850|ref|XP_003356307.1| PREDICTED: YTH domain family protein 2-like isoform 2 [Sus scrofa]
Length = 530
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 362 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 421
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 422 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 477
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 478 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 518
>gi|145247813|ref|XP_001396155.1| hypothetical protein ANI_1_524114 [Aspergillus niger CBS 513.88]
gi|134080899|emb|CAK46416.1| unnamed protein product [Aspergillus niger]
Length = 627
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
SRYFIVKS ++LELS Q +WATQ NE +LNEA+++A++V LIFS N++ + G A+
Sbjct: 418 SRYFIVKSLTVDDLELSRQNNIWATQTHNEKQLNEAYENADDVYLIFSANKSGEYYGYAR 477
Query: 322 MTSKI 326
M S I
Sbjct: 478 MMSPI 482
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYL 399
G G+ F ++WL + FH+TR LRNP+N N VKI+RD E+EP +G +L L +
Sbjct: 564 GAQLIGKPFRIRWLSTTRVPFHRTRGLRNPWNSNREVKIARDGTEIEPEVGWKLLQLFHS 623
Query: 400 EP 401
+P
Sbjct: 624 QP 625
>gi|281340968|gb|EFB16552.1| hypothetical protein PANDA_020301 [Ailuropoda melanoleuca]
Length = 564
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 401 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 460
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 461 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 516
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 517 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 557
>gi|443701419|gb|ELT99900.1| hypothetical protein CAPTEDRAFT_19575 [Capitella teleta]
Length = 182
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 85/166 (51%), Gaps = 8/166 (4%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTR 314
P+G +R+FI+KS + +++ S++ +W + +L+ A+ E V L FSVN +
Sbjct: 3 PKG-ARFFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYREREGKGPVFLFFSVNGSG 61
Query: 315 HFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
HF G A+M S + + W + F VKW+ + ++ + RH+R NEN
Sbjct: 62 HFCGMAQMMSAVDYNASSSVW----AQDKWKGQFEVKWIYVKDVPNSQLRHIRLENNENK 117
Query: 375 PVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
PV SRD QE+ G+Q+ +L+ + + + KR+E++
Sbjct: 118 PVTNSRDTQEVPLEKGKQVLRILHQYRHTTSIFDDFSHYEKRQEDE 163
>gi|426221821|ref|XP_004005105.1| PREDICTED: YTH domain family protein 2 [Ovis aries]
Length = 530
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 362 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 421
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 422 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 477
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 478 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 522
>gi|344254961|gb|EGW11065.1| YTH domain family protein 1 [Cricetulus griseus]
Length = 509
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 340 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 399
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 400 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 455
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 456 RDTQEVPLEKAKQVLKII 473
>gi|351698310|gb|EHB01229.1| YTH domain family protein 3, partial [Heterocephalus glaber]
Length = 578
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 533 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 573
>gi|156036412|ref|XP_001586317.1| hypothetical protein SS1G_12895 [Sclerotinia sclerotiorum 1980]
gi|154698300|gb|EDN98038.1| hypothetical protein SS1G_12895 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 615
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 226 VQQPQQQGTQTTQMQNLPNGLPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWA 285
V + ++ + + Q +P+G ++PL + +YF+VKS E+LELSV+ G+WA
Sbjct: 351 VSENEKASKEAVEKQQMPDG-------ESSPLSK--DKYFVVKSLTVEDLELSVRNGIWA 401
Query: 286 TQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTSKI 326
TQ NE LN+A+ +A+NV LIFS N++ + G A+M S I
Sbjct: 402 TQTHNEEALNKAYQTADNVYLIFSANKSGEYFGYARMISPI 442
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELE SIG++L L +
Sbjct: 524 WGKPFKLEWISTTRLPFYRTRGLRNPWNSNREVKIARDGTELETSIGKRLVGLFH 578
>gi|338722047|ref|XP_003364473.1| PREDICTED: YTH domain family protein 2-like isoform 2 [Equus
caballus]
Length = 530
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 362 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 421
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 422 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 477
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 478 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 518
>gi|296200889|ref|XP_002747796.1| PREDICTED: YTH domain family protein 1 [Callithrix jacchus]
Length = 559
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|354482020|ref|XP_003503198.1| PREDICTED: YTH domain family protein 1-like [Cricetulus griseus]
Length = 665
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 496 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 555
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 556 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 611
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 612 RDTQEVPLEKAKQVLKII 629
>gi|194745212|ref|XP_001955082.1| GF18592 [Drosophila ananassae]
gi|190628119|gb|EDV43643.1| GF18592 [Drosophila ananassae]
Length = 696
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 240 QNLPNGLPNQTNRN--ATPLPQG-ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
Q L + L ++ N N A L Q SR+F++KS + +++ S++ +W + +L++
Sbjct: 358 QLLLDELKDKNNYNPKAMDLKQASASRFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDD 417
Query: 297 AFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKW 352
AF N++L FSVN + HF G A+M + + + W + F VKW
Sbjct: 418 AFKERHKEGGNIMLFFSVNGSGHFCGMAQMMTAVDYNSTSSVW----SQDKWRGKFKVKW 473
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY-LEPDSELMAISVA 411
+ + ++ K RH+R N+N V SRD QE+ G ++ +L+ + +
Sbjct: 474 IYVKDVPNGKLRHIRLENNDNKSVTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFH 533
Query: 412 AEAKREEE 419
E K+EEE
Sbjct: 534 YERKQEEE 541
>gi|348531587|ref|XP_003453290.1| PREDICTED: YTH domain family protein 2-like [Oreochromis niloticus]
Length = 594
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 426 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLGGKGPLYLLFSVNGSGHFCGV 485
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 486 AEMRSPVDYNTSAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 541
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ Q+ ++ + + + KR+EE+
Sbjct: 542 RDTQEVPLDKARQVLKIIAGYKHTTSIFDDFSHYEKRQEEE 582
>gi|256078235|ref|XP_002575402.1| hypothetical protein [Schistosoma mansoni]
gi|353230392|emb|CCD76563.1| hypothetical protein Smp_040460 [Schistosoma mansoni]
Length = 736
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 73/139 (52%), Gaps = 7/139 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+R+F++KS + +++ S++ +W + KL+ AF A + + L FSVN + HF G
Sbjct: 567 ARFFVIKSFSEDDIHRSIKYSIWCSTELGNKKLDTAFAEANHAYPIYLFFSVNGSGHFCG 626
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S++ + W + FSV+W+ + ++ RH+R N+N PV
Sbjct: 627 MAEMVSRVDYNARASVW----AQDKWQGKFSVRWIFVKDVPNTALRHIRIETNDNKPVTH 682
Query: 379 SRDCQELEPSIGEQLAALL 397
SRD EL G+Q+ +L
Sbjct: 683 SRDTTELPLERGKQVMEVL 701
>gi|303323107|ref|XP_003071545.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111247|gb|EER29400.1| Zinc finger CCCH type domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|320033369|gb|EFW15317.1| mRNA 3'-end-processing protein yth1 [Coccidioides posadasii str.
Silveira]
Length = 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS A A AP H VC+H+L+ LC KG C +LH+Y+ RMP C
Sbjct: 64 HPTPSRISTATSPAIAPSSTHGS------LVCKHYLKGLCKKGIKCEYLHEYNLRRMPEC 117
Query: 107 RFFRLFGECRE-QDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+ F G C DC+Y+H +E+ K C Y GFCP GP C +HV+
Sbjct: 118 QAFARSGYCANGDDCLYQHVSEEAKLPPCEHYDKGFCPLGPLCAKKHVR 166
>gi|440908366|gb|ELR58390.1| YTH domain family protein 3, partial [Bos grunniens mutus]
Length = 581
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 536 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 576
>gi|345492973|ref|XP_001602116.2| PREDICTED: YTH domain family protein 2-like [Nasonia vitripennis]
Length = 618
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 10/172 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 395 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASRDSAPLYLFFSVNGSGHFC 454
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH++ NEN PV
Sbjct: 455 GMAQMVSSVDYKSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVT 510
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR--EEEKAKGVNPD 427
SRD QE+ + G Q+ +L+ S + +R EE++ KG P+
Sbjct: 511 NSRDAQEVPHAKGVQVLRILHSYRHSTSIFDDFGHYERRQAEEDQRKGPPPN 562
>gi|114051946|ref|NP_001040564.1| YTH domain family protein 2 [Rattus norvegicus]
gi|95102030|dbj|BAE94259.1| ZH3 [Rattus norvegicus]
Length = 595
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 527 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 567
>gi|388453313|ref|NP_001253505.1| YTH domain family protein 1 [Macaca mulatta]
gi|402882027|ref|XP_003904557.1| PREDICTED: YTH domain family protein 1 [Papio anubis]
gi|380814054|gb|AFE78901.1| YTH domain family protein 1 [Macaca mulatta]
gi|383408447|gb|AFH27437.1| YTH domain family protein 1 [Macaca mulatta]
gi|384947866|gb|AFI37538.1| YTH domain family protein 1 [Macaca mulatta]
Length = 559
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|119189407|ref|XP_001245310.1| hypothetical protein CIMG_04751 [Coccidioides immitis RS]
gi|392868216|gb|EAS33965.2| mRNA 3'-end-processing protein yth1 [Coccidioides immitis RS]
Length = 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS A A AP H VC+H+L+ LC KG C +LH+Y+ RMP C
Sbjct: 64 HPTPSRISTATSPAIAPSSTHGS------LVCKHYLKGLCKKGIKCEYLHEYNLRRMPEC 117
Query: 107 RFFRLFGECRE-QDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+ F G C DC+Y+H +E+ K C Y GFCP GP C +HV+
Sbjct: 118 QSFARSGYCANGDDCLYQHVSEEAKLPPCEHYDKGFCPLGPLCAKKHVR 166
>gi|346320313|gb|EGX89914.1| high-affinity glucose transporter, putative [Cordyceps militaris
CM01]
Length = 293
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 99 VCKHWLRGLCKKGVPCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHVDPLSKLPPCP 158
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y +GFCP GP C +HV+
Sbjct: 159 HYDMGFCPLGPVCAKKHVR 177
>gi|417411629|gb|JAA52245.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 561
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ VW + +L+ AF S + V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDVHRSIKYSVWCSTEHGNKRLDGAFRSVGSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 508 RDTQEVPLEKAKQVLKII 525
>gi|357148846|ref|XP_003574913.1| PREDICTED: uncharacterized protein LOC100846631 isoform 1
[Brachypodium distachyon]
Length = 646
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 383 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYHEAKEKGEHCPIFLLFSVNASAQ 442
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+MT + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 443 FCGVAEMTGPVNFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 498
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 499 VTNSRDTQEVKLERGLEMLKIF 520
>gi|355697988|gb|EHH28536.1| hypothetical protein EGK_18992, partial [Macaca mulatta]
gi|355779721|gb|EHH64197.1| hypothetical protein EGM_17359, partial [Macaca fascicularis]
Length = 588
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 536 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 576
>gi|448086917|ref|XP_004196210.1| Piso0_005659 [Millerozyma farinosa CBS 7064]
gi|359377632|emb|CCE86015.1| Piso0_005659 [Millerozyma farinosa CBS 7064]
Length = 268
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRHFQ 317
SR+F++KS N ++E S++ +W + +LN+A+ A ++ L FSVN + HF
Sbjct: 128 SRFFVIKSYNAVDVEASIENRIWTSTNLGNKRLNKAYCEARAEHGSIFLFFSVNCSGHFC 187
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G +M KI S W + + F V WL + ++ +HLRNP NE+ P+
Sbjct: 188 GLVEMKDKIDFSRTSSVWV---EKSRWKGIFPVDWLIVKDIPNRYFQHLRNPLNEHKPIS 244
Query: 378 ISRDCQELEPSIGEQLAAL 396
SRD QE+ I + +
Sbjct: 245 NSRDTQEIPHDIAISMLKI 263
>gi|407921571|gb|EKG14713.1| hypothetical protein MPH_08186 [Macrophomina phaseolina MS6]
Length = 649
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FIVKS ++LELSV+ G+WATQ NE LN A+++AENV LIFS N++ + G A+M
Sbjct: 421 KFFIVKSLTLQDLELSVRNGIWATQSHNEDVLNRAYEAAENVYLIFSANKSGEYFGYARM 480
Query: 323 TSKI 326
S I
Sbjct: 481 ASAI 484
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELEP +G++L + +
Sbjct: 566 WGKPFRIEWISTNRLPFYRTRGLRNPWNANREVKIARDGTELEPGVGKRLIQMFH 620
>gi|357148849|ref|XP_003574914.1| PREDICTED: uncharacterized protein LOC100846631 isoform 2
[Brachypodium distachyon]
Length = 623
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 383 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYHEAKEKGEHCPIFLLFSVNASAQ 442
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+MT + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 443 FCGVAEMTGPVNFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 498
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 499 VTNSRDTQEVKLERGLEMLKIF 520
>gi|148235620|ref|NP_001084740.1| uncharacterized protein LOC414710 [Xenopus laevis]
gi|46329541|gb|AAH68959.1| MGC83235 protein [Xenopus laevis]
Length = 494
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 9/184 (4%)
Query: 246 LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-- 303
L N N + R FI+KS + +++ S++ VW + +L+ AF S
Sbjct: 312 LVNNYNPKDFDFSLKLGRVFIIKSYSEDDIHRSIKYNVWCSTEHGNKRLDAAFRSLNGKG 371
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L+FSVN + HF G A+M S + + G W + F V+WL + ++ +
Sbjct: 372 PLYLLFSVNGSGHFCGVAEMCSAVDYNTCAGVWS----QDKWKGRFDVRWLFVKDVPNGQ 427
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEK 420
RH+R NEN PV SRD QE+ Q+ ++ Y S S + + EE+
Sbjct: 428 LRHIRLENNENKPVTNSRDTQEVPLEKARQVLRIIASYKHTTSIFDDFSHYEKRQEEEDS 487
Query: 421 AKGV 424
K V
Sbjct: 488 VKKV 491
>gi|444511314|gb|ELV09851.1| YTH domain family protein 3 [Tupaia chinensis]
Length = 622
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 458 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 517
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 518 AEMKSVVDYNAYAGVW----SQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 573
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 574 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 614
>gi|291388034|ref|XP_002710571.1| PREDICTED: YTH domain family, member 3 isoform 1 [Oryctolagus
cuniculus]
Length = 588
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 81/161 (50%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + A KR+EE+
Sbjct: 536 RDTQEVPLEKAKQVLKIIATFKHTTSIFDDFAHYEKRQEEE 576
>gi|50288011|ref|XP_446434.1| hypothetical protein [Candida glabrata CBS 138]
gi|74610179|sp|Q6FTL0.1|YTH1_CANGA RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49525742|emb|CAG59361.1| unnamed protein product [Candida glabrata]
Length = 209
Score = 78.2 bits (191), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C F+ G C + +C Y H + +
Sbjct: 65 KIVCKHWLRGLCKKNDNCEYLHEYNLRKMPECVFYAKNGFCTQSPECQYLHIDPLSKVPP 124
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y++GFCP G C RH+K
Sbjct: 125 CEDYEMGFCPKGSACEKRHIK 145
>gi|344306276|ref|XP_003421814.1| PREDICTED: YTH domain family protein 1 [Loxodonta africana]
Length = 559
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDVHRSIKYSIWCSTEHGNKRLDGAFRSLGSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|409045813|gb|EKM55293.1| hypothetical protein PHACADRAFT_255797 [Phanerochaete carnosa
HHB-10118-sp]
Length = 787
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 12/147 (8%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN-----VILIFSVNRTRH 315
+RYF++KS +++ S++ +W++ +L++AF EN + L+FSVN + H
Sbjct: 507 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFK--ENSGRGPIYLLFSVNASGH 564
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENL 374
F G A+M + + + W + + F V+W+ + ++ RH+R N E
Sbjct: 565 FCGMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWVFVRDIPNSSLRHIRLNNTQERK 620
Query: 375 PVKISRDCQELEPSIGEQLAALLYLEP 401
PV SRD QEL P G+++ + + P
Sbjct: 621 PVTNSRDTQELLPEAGQEMLRIFHTHP 647
>gi|429858684|gb|ELA33497.1| zinc finger ccch type domain containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 257
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTN--EDIKECN 133
VC+HWLR LC KG++C FLH+Y+ +MP C FF G C ++C+Y H + + C
Sbjct: 82 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFMRNGYCSNGEECLYLHIDPQSKLPPCP 141
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C +HV+
Sbjct: 142 HYDKGFCPLGPRCSKKHVR 160
>gi|396458024|ref|XP_003833625.1| similar to YT521-B-like splicing factor [Leptosphaeria maculans
JN3]
gi|312210173|emb|CBX90260.1| similar to YT521-B-like splicing factor [Leptosphaeria maculans
JN3]
Length = 680
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
+YFIVKS ++LELSV+ G+WATQ NE LN+AF S +NV LIFS N++ + G A+M
Sbjct: 457 KYFIVKSLTLQDLELSVRNGIWATQSHNEGTLNKAFGSTKNVYLIFSANKSGEYFGYARM 516
Query: 323 TSKI 326
S I
Sbjct: 517 ASPI 520
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELEPS+GE+L + +
Sbjct: 603 WGKPFKIEWICTNRLPFYRTRGLRNPWNANREVKIARDGTELEPSVGERLLQMFH 657
>gi|171695376|ref|XP_001912612.1| hypothetical protein [Podospora anserina S mat+]
gi|170947930|emb|CAP60094.1| unnamed protein product [Podospora anserina S mat+]
Length = 235
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIKE 131
F VC+HWLR LC KG C FLH+Y+ +MP C FF G C D C+Y H + K
Sbjct: 60 FGSLVCKHWLRGLCKKGLTCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPSSKL 119
Query: 132 --CNMYKLGFCPNGPDCRYRHVK 152
C Y GFCP GP C RH+K
Sbjct: 120 PPCPHYDRGFCPLGPKCDKRHLK 142
>gi|410953414|ref|XP_003983366.1| PREDICTED: YTH domain family protein 1 [Felis catus]
Length = 623
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +A + V L+FSVN + HF G
Sbjct: 454 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRAAGSKGPVYLLFSVNGSGHFCGV 513
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 514 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 569
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 570 RDTQEVPLEKAKQVLRII 587
>gi|426328676|ref|XP_004025376.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 2
[Gorilla gorilla gorilla]
Length = 536
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 368 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 427
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 428 AEMKSAVDYNTCAGVW----SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 483
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 484 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 528
>gi|407929377|gb|EKG22207.1| SNARE associated Golgi protein [Macrophomina phaseolina MS6]
Length = 289
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIKE--CN 133
VC+HWLR LC KG+AC FLH+Y+ RMP C + C DC+Y H + + K C
Sbjct: 99 VCKHWLRGLCKKGEACEFLHEYNLRRMPECNHYSRHLTCSNGDDCLYLHIDPESKRPPCP 158
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C +HV+
Sbjct: 159 HYDRGFCPLGPRCAKKHVR 177
>gi|403282583|ref|XP_003932724.1| PREDICTED: YTH domain family protein 1 [Saimiri boliviensis
boliviensis]
Length = 519
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 350 RAFIIKSYSEDDVHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 409
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 410 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 465
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 466 RDTQEVPLEKAKQVLKII 483
>gi|393245639|gb|EJD53149.1| YTH-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 776
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+R+F++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 522 FARFFVIKSYTEDDVHKSLKYEIWSSTEPGNKRLDKAFKETAGRGPIYLFFSVNGSGHFC 581
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 582 GMAEMLTPVDLTRSSTVW----ASDKWKGVFKVRWIFVRDIPNSSLRHIRLNNTQERKPV 637
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G ++ + + P
Sbjct: 638 TNSRDTQELLPDAGHEMLRIFFTHP 662
>gi|348554085|ref|XP_003462856.1| PREDICTED: YTH domain family protein 1-like [Cavia porcellus]
Length = 559
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLRII 523
>gi|258566097|ref|XP_002583793.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
gi|237907494|gb|EEP81895.1| hypothetical protein UREG_06760 [Uncinocarpus reesii 1704]
Length = 251
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS A A AP H VC+H+L+ LC KG C +LH+Y+ RMP C
Sbjct: 64 HPTPSRISTATSPAIAPSSTHGS------LVCKHYLKGLCKKGIKCEYLHEYNLRRMPEC 117
Query: 107 RFFRLFGECRE-QDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
+ F G C DC+Y+H E+ K C Y+ GFCP GP C +HV+
Sbjct: 118 QSFSRSGYCPNGDDCLYQHVPEEAKLPSCEHYEKGFCPLGPLCAKKHVR 166
>gi|259481087|tpe|CBF74298.1| TPA: YT521-B-like splicing factor, putative (AFU_orthologue;
AFUA_7G03780) [Aspergillus nidulans FGSC A4]
Length = 630
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS E+LELS Q G+WATQ NE LN AF++A+NV L FS N++ + G A+M
Sbjct: 420 RYFILKSLTVEDLELSWQSGIWATQTHNEESLNRAFENADNVYLFFSANKSGEYYGYARM 479
Query: 323 TSKI 326
S I
Sbjct: 480 MSTI 483
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 345 GRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
G+ F ++WL + FH+TR LRNP+N N VKI+RD ELE S+GE+L L +
Sbjct: 572 GKPFRIRWLSTERVPFHRTRGLRNPWNANREVKIARDGTELEFSVGEKLVLLFH 625
>gi|403416981|emb|CCM03681.1| predicted protein [Fibroporia radiculosa]
Length = 967
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS +++L++SV++G+WATQR NE L++AF ++++V LIF VN++ F G AKM
Sbjct: 583 RYFILKSLTQKDLDISVEKGLWATQRHNETTLDQAFRTSKDVYLIFGVNKSGEFYGYAKM 642
Query: 323 TSKI 326
+
Sbjct: 643 IGPV 646
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 327 GGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 386
GG V G + G + +G F V+W++ L F +TRHLRNP+N + VK+SRD ELE
Sbjct: 860 GGEVRGDGEEAREGPS-WGEPFQVQWIRTERLPFFRTRHLRNPWNHDREVKVSRDGTELE 918
Query: 387 PSIGEQL 393
P++G+ L
Sbjct: 919 PTVGQAL 925
>gi|367012315|ref|XP_003680658.1| hypothetical protein TDEL_0C05580 [Torulaspora delbrueckii]
gi|359748317|emb|CCE91447.1| hypothetical protein TDEL_0C05580 [Torulaspora delbrueckii]
Length = 210
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTNED--IKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C FF G C + +C Y H + I
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQTPECQYLHLDPQARIAL 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y +GFC G C+ RHVK
Sbjct: 124 CEDYTMGFCALGAQCKKRHVK 144
>gi|453085541|gb|EMF13584.1| hypothetical protein SEPMUDRAFT_43441, partial [Mycosphaerella
populorum SO2202]
Length = 183
Score = 77.8 bits (190), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 21/150 (14%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYF++KS N +N+ + + VWATQ NE L A+ ++ +VIL+FSVN++ FQG A M
Sbjct: 6 RYFMIKSWNHDNVYEAQRTNVWATQEKNEEMLTHAYKTSRHVILLFSVNKSMAFQGYALM 65
Query: 323 TSKIGGSVGGG------NWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN----- 371
TS + NW ++ F+++WL + F HL+N +N
Sbjct: 66 TSAPDPDIQKPSFTRRLNWATSNA-------FTLQWLAKTPIDFQLVGHLKNTFNIDEDT 118
Query: 372 -ENLPVKISRDCQELEPSIGEQLAALLYLE 400
E V + RD QE+ G + L +L+
Sbjct: 119 GEAHAVLVGRDGQEINADAG--MGVLWFLD 146
>gi|351714880|gb|EHB17799.1| YTH domain family protein 1 [Heterocephalus glaber]
Length = 559
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLRII 523
>gi|449547231|gb|EMD38199.1| hypothetical protein CERSUDRAFT_64463 [Ceriporiopsis subvermispora
B]
Length = 806
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 522 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 581
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 582 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNAGLRHIRLNNTQERKPV 637
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 638 TNSRDTQELLPDAGQEMLRIFHTHP 662
>gi|403417726|emb|CCM04426.1| predicted protein [Fibroporia radiculosa]
Length = 809
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 527 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 586
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 587 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNANLRHIRLNNTQERKPV 642
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 643 TNSRDTQELLPDAGQEMLRIFHTHP 667
>gi|347826633|emb|CCD42330.1| hypothetical protein [Botryotinia fuckeliana]
Length = 634
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
+R++ PL + ++F+VKS E+LELSV+ G+WATQ NE LN+A+ +A+NV LIFS
Sbjct: 388 DRDSPPLTK--DKFFVVKSLTVEDLELSVRNGIWATQTHNEEALNKAYQAADNVYLIFSA 445
Query: 311 NRTRHFQGCAKMTSKI 326
N++ + G A+M S I
Sbjct: 446 NKSGEYFGYARMISPI 461
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEP 401
+G+ F + W+ L F++TR LRNP+N N VKI+RD ELE SIG++L L + P
Sbjct: 543 WGKPFKLGWISTTRLPFYRTRGLRNPWNSNREVKIARDGTELETSIGKRLVGLFHRVP 600
>gi|238495797|ref|XP_002379134.1| YT521-B-like splicing factor, putative [Aspergillus flavus
NRRL3357]
gi|220694014|gb|EED50358.1| YT521-B-like splicing factor, putative [Aspergillus flavus
NRRL3357]
Length = 575
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
P+ +RYFIVKS + ++LELS Q G+WATQ NE LN A+ +A+NV L+FS N++ +
Sbjct: 365 PRMPNRYFIVKSLSMDDLELSRQSGIWATQAHNEGNLNHAYQTADNVYLVFSANKSGEYY 424
Query: 318 GCAKMTSKI 326
G A+M S I
Sbjct: 425 GYARMVSPI 433
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 345 GRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
G+ F ++WL + F++TR LRNP+N N +KI+RD E+EP++GE+L L +
Sbjct: 517 GKPFRIQWLSTERVPFYRTRGLRNPWNANREIKIARDGTEIEPAVGERLVQLFH 570
>gi|332858983|ref|XP_003317109.1| PREDICTED: YTH domain family protein 1 [Pan troglodytes]
Length = 560
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 391 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 450
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 451 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 506
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 507 RDTQEVPLEKAKQVLKII 524
>gi|449302347|gb|EMC98356.1| hypothetical protein BAUCODRAFT_67543, partial [Baudoinia
compniacensis UAMH 10762]
Length = 152
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS N EN+ + + +WATQ NE L++AF ++ +VIL+FSVN++ FQG A M
Sbjct: 3 RYFILKSWNMENVVNAQRDSLWATQVHNENLLSDAFRTSRHVILLFSVNKSMAFQGYALM 62
Query: 323 TSKIGGSVGGG------NWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNEN--- 373
TS ++ NW + F+++WL + F HL+N N +
Sbjct: 63 TSPPDPTLPKPPFCAKLNWSTSPA-------FTIRWLATTPVPFRAVGHLKNTLNLDDGG 115
Query: 374 --LPVKISRDCQELEPSIGEQLAALL 397
V + RD QE+ G + ++L
Sbjct: 116 SPRAVLVGRDGQEVSADAGMGVVSVL 141
>gi|291416011|ref|XP_002724241.1| PREDICTED: CG6422-like [Oryctolagus cuniculus]
Length = 542
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ VW + +L+ AF + + V L+FSVN + HF G
Sbjct: 373 RVFIIKSYSEDDVHRSIKYSVWCSTEHGNKRLDSAFRATGSKGPVYLLFSVNGSGHFCGV 432
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 433 AEMKSPVDHGASAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 488
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 489 RDTQEVPLEKAKQVLRII 506
>gi|348503033|ref|XP_003439071.1| PREDICTED: YTH domain family protein 1 [Oreochromis niloticus]
Length = 616
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 432 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMNGKGPVYLLFSVNGSGHFCGV 491
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 492 AEMRSPVDYGTSAGVW----AQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNS 547
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 548 RDTQEVPLEKAKQVLKII 565
>gi|299743488|ref|XP_001835809.2| hypothetical protein CC1G_02897 [Coprinopsis cinerea okayama7#130]
gi|298405676|gb|EAU85874.2| hypothetical protein CC1G_02897 [Coprinopsis cinerea okayama7#130]
Length = 683
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 51/74 (68%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+R+FI+KS + ++L LSV+ G+WATQ+ NE L++AF +A++V LIFSVN++ F G A+
Sbjct: 377 TRFFILKSLSEDDLALSVKNGLWATQKHNELLLDQAFRTAKDVFLIFSVNKSGEFYGYAR 436
Query: 322 MTSKIGGSVGGGNW 335
M I G W
Sbjct: 437 MIGPIRRGEGTVTW 450
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 338 AHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
A T +G F ++WL+L + FH+TRHLRNP+N+ +KISRD ELEP+IG++L
Sbjct: 618 APSTPGWGECFKIEWLELRRIPFHQTRHLRNPWNKGREIKISRDGTELEPTIGKKL 673
>gi|336367275|gb|EGN95620.1| hypothetical protein SERLA73DRAFT_162422 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379993|gb|EGO21147.1| hypothetical protein SERLADRAFT_417528 [Serpula lacrymans var.
lacrymans S7.9]
Length = 821
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 563 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKECAGRGPIYLFFSVNASGHFC 622
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 623 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNANLRHIRLNNTQERKPV 678
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 679 TNSRDTQELLPEAGQEMLRIFHTHP 703
>gi|358373002|dbj|GAA89602.1| YT521-B-like splicing factor [Aspergillus kawachii IFO 4308]
Length = 649
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 49/65 (75%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
SRYFIVKS + ++LE+S Q +WATQ NE +LNEA+++A++V LIFS N++ + G A+
Sbjct: 438 SRYFIVKSLSVDDLEISRQNSIWATQTHNEKQLNEAYENADDVYLIFSANKSGEYYGYAR 497
Query: 322 MTSKI 326
M S I
Sbjct: 498 MMSPI 502
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYL 399
G G+ F ++WL + FH+TR LRNP+N N VKI+RD E+EP +G +L L +
Sbjct: 586 GAQLIGKPFRIRWLSTTRVPFHRTRGLRNPWNSNREVKIARDGTEIEPEVGWKLLQLFHS 645
Query: 400 EP 401
+P
Sbjct: 646 QP 647
>gi|410898583|ref|XP_003962777.1| PREDICTED: YTH domain family protein 2-like [Takifugu rubripes]
Length = 614
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 446 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLGAKGPLYLLFSVNGSGHFCGV 505
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 506 AEMRSPVDYNTSAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 561
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ Q+ ++ + + + KR+EE+
Sbjct: 562 RDTQEVPLDKARQVLKIIAGYKHTTSIFDDFSHYEKRQEEE 602
>gi|398394237|ref|XP_003850577.1| hypothetical protein MYCGRDRAFT_45630 [Zymoseptoria tritici IPO323]
gi|339470456|gb|EGP85553.1| hypothetical protein MYCGRDRAFT_45630 [Zymoseptoria tritici IPO323]
Length = 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 250 TNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFS 309
+N + T +P+ +YFIVKS ++LE SV+ G+WATQ NE LN A++ A+NV LIFS
Sbjct: 177 SNTSDTKVPE---KYFIVKSLTAQDLEASVRNGIWATQSHNEEILNRAYEQADNVYLIFS 233
Query: 310 VNRTRHFQGCAKMTSKIGG 328
N++ + G A+M S+I G
Sbjct: 234 ANKSGEYFGYARMASQISG 252
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 327 GGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELE 386
G+ G NW GR F ++W+ L F++TR LRNP+N + VKI+RD ELE
Sbjct: 329 AGATAGQNW---------GRQFQIEWMSTNRLPFYRTRGLRNPWNASREVKIARDGTELE 379
Query: 387 PSIGEQLAALL 397
P +G +L +
Sbjct: 380 PGVGRKLVGMF 390
>gi|31377750|ref|NP_060268.2| YTH domain family protein 1 [Homo sapiens]
gi|28380041|sp|Q9BYJ9.1|YTHD1_HUMAN RecName: Full=YTH domain family protein 1; AltName:
Full=Dermatomyositis associated with cancer putative
autoantigen 1; Short=DACA-1
gi|29791407|gb|AAH50284.1| YTH domain family, member 1 [Homo sapiens]
gi|119595711|gb|EAW75305.1| YTH domain family, member 1, isoform CRA_a [Homo sapiens]
Length = 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|392565976|gb|EIW59152.1| hypothetical protein TRAVEDRAFT_58115 [Trametes versicolor
FP-101664 SS1]
Length = 697
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSV++G+WATQR NE L++AF +++ V LIFSVN++ F G AKM
Sbjct: 336 RYFILKSLTQFDLDLSVEKGLWATQRHNEGILDQAFRTSKEVYLIFSVNKSGEFYGYAKM 395
Query: 323 TSKI 326
I
Sbjct: 396 AGPI 399
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G F V+W++ L F +TRHLRNP+N + VK+SRD ELEP++G+ L
Sbjct: 599 WGEPFKVEWIRSHRLPFTRTRHLRNPWNHDREVKVSRDGTELEPAVGQLL 648
>gi|114683011|ref|XP_525419.2| PREDICTED: YTH domain family protein 1 isoform 2 [Pan troglodytes]
gi|426392438|ref|XP_004062557.1| PREDICTED: YTH domain family protein 1 isoform 1 [Gorilla gorilla
gorilla]
gi|410214510|gb|JAA04474.1| YTH domain family, member 1 [Pan troglodytes]
gi|410247820|gb|JAA11877.1| YTH domain family, member 1 [Pan troglodytes]
gi|410300990|gb|JAA29095.1| YTH domain family, member 1 [Pan troglodytes]
gi|410353783|gb|JAA43495.1| YTH domain family, member 1 [Pan troglodytes]
Length = 559
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|392595501|gb|EIW84824.1| YTH-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 786
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 525 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKELAGRGPIYLFFSVNASGHFC 584
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 585 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNMNLRHIRLNNTQERKPV 640
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 641 TNSRDTQELLPEAGQEMLRIFHTHP 665
>gi|299753126|ref|XP_001833079.2| high-glucose-regulated protein 8 [Coprinopsis cinerea okayama7#130]
gi|298410155|gb|EAU88768.2| high-glucose-regulated protein 8 [Coprinopsis cinerea okayama7#130]
Length = 807
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 75/145 (51%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + + + L FSVN + HF
Sbjct: 473 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKESASRGPIYLFFSVNASGHFC 532
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F VKW+ + ++ RH++ N E PV
Sbjct: 533 GMAEMMTPVDYTRSSTVW----ASDKWKGVFKVKWIFVRDIPNAALRHIKLNNTQERKPV 588
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 589 TNSRDTQELLPDAGQEMLRIFHTHP 613
>gi|346320800|gb|EGX90400.1| YT521-B-like splicing factor, putative [Cordyceps militaris CM01]
Length = 622
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+F++KS RE++E SV+ G+WATQ NE LN AF + +NV LIFS N++ + G A+M
Sbjct: 399 RFFVLKSLTREDMEKSVKTGIWATQSHNEELLNNAFKTTDNVYLIFSANKSGEYFGFARM 458
Query: 323 TSKIGGSVGGG 333
TS+I G
Sbjct: 459 TSEINQDPGAA 469
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 39/54 (72%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL + L F++TR LRNP+N N VKI+RD ELEP++G +L L+
Sbjct: 545 WGKPFKLQWLSIIPLPFYRTRGLRNPWNSNREVKIARDGTELEPAVGRRLIGLM 598
>gi|324506530|gb|ADY42787.1| YTH domain-containing protein 1 [Ascaris suum]
Length = 573
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 264 YFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMT 323
+F+ +SC+ EN+ L+ ++ W T R E L ++F A VILIF N HF G AKM
Sbjct: 211 FFLSRSCH-ENIRLAKERSFWTTSRHVEESLGDSFMKAPAVILIFLENGADHFAGFAKMC 269
Query: 324 SK-IGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDC 382
SK + WK G G N ++W+ C L T+HLRN N V D
Sbjct: 270 SKALYRGQPALRWKEFSG----GGNIKLQWISRCSLPIAATKHLRNSLNHGKAVYAGVDG 325
Query: 383 QELEPSIGEQLAALLYLEPDSELMAI 408
+++ + G++L +L ++ +L +
Sbjct: 326 SKIQRTTGQRLCSLFPIDDGIDLSTL 351
>gi|149607218|ref|XP_001517887.1| PREDICTED: YTH domain family protein 2-like [Ornithorhynchus
anatinus]
Length = 466
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 298 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAFRSLNAKGPVYLLFSVNGSGHFCGV 357
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 358 AEMCSAVDYNTCAGVW----SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 413
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE +Q+ ++ Y S S + + EEE K
Sbjct: 414 RDTQEAPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEETVK 458
>gi|170050797|ref|XP_001861473.1| YTH domain protein [Culex quinquefasciatus]
gi|167872275|gb|EDS35658.1| YTH domain protein [Culex quinquefasciatus]
Length = 756
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHF 316
++R+F++KS + +++ S++ +W + +L++A+ E V L FSVN + HF
Sbjct: 401 LARFFVIKSYSEDDIHRSIKYEIWCSTEHGNQRLDQAYREREEKGGMVYLFFSVNGSGHF 460
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M + + + W + F V+W+ + ++ + R +R NEN P+
Sbjct: 461 CGIAQMMTAVDYNSISSVWS----QDKWKGTFKVRWIYVKDVPNGQLRQVRLENNENKPI 516
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAI---SVAAEAKREEEKAKGVNP 426
SRD QE+ + G L AL + M+I + E ++ EE K P
Sbjct: 517 TNSRDTQEVPNAKG--LQALKIIHSYKHTMSIFDDFIHYEQRQLEEDTKKHEP 567
>gi|193788236|dbj|BAG53130.1| unnamed protein product [Homo sapiens]
Length = 559
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 506 RDTQEVPLEKAKQVLKII 523
>gi|349604852|gb|AEQ00285.1| YTH domain family protein 2-like protein, partial [Equus caballus]
Length = 377
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 217 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 276
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 277 AEMKSAVDYNTCAGVW----SQDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 332
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE+ +Q+ ++ Y S S + + EEE K
Sbjct: 333 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 377
>gi|13277546|gb|AAH03681.1| YTHDF1 protein, partial [Homo sapiens]
Length = 548
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 379 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 438
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 439 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 494
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 495 RDTQEVPLEKAKQVLKII 512
>gi|170092032|ref|XP_001877238.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648731|gb|EDR12974.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 979
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 50/73 (68%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS R +L+LSV+ G+WATQ+ NE L++AF ++++V LIF VN++ F G A+M
Sbjct: 622 RYFILKSLTRYDLDLSVESGLWATQKHNEGILDQAFRTSKDVYLIFGVNKSGEFYGYARM 681
Query: 323 TSKIGGSVGGGNW 335
+ S +W
Sbjct: 682 AGPVRRSEAHVSW 694
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G F ++WL +L F++ RHLRNP+N VK+SRD ELEP +G++L
Sbjct: 893 WGDCFKIEWLCTEKLPFYRIRHLRNPWNHEREVKVSRDGTELEPIVGQRL 942
>gi|426392440|ref|XP_004062558.1| PREDICTED: YTH domain family protein 1 isoform 2 [Gorilla gorilla
gorilla]
Length = 561
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 508 RDTQEVPLEKAKQVLKII 525
>gi|19263664|gb|AAH25264.1| YTHDF1 protein, partial [Homo sapiens]
Length = 502
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 333 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 392
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 393 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 448
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 449 RDTQEVPLEKAKQVLKII 466
>gi|342879608|gb|EGU80853.1| hypothetical protein FOXB_08720 [Fusarium oxysporum Fo5176]
Length = 637
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELSV G+WATQ NE LN AF A+NV L+FS N++ + G A+M
Sbjct: 407 KFFILKSLTVEDLELSVSTGIWATQSHNEEALNNAFKDADNVYLVFSANKSGEYYGYARM 466
Query: 323 TSKI 326
S+I
Sbjct: 467 ISQI 470
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 553 WGKPFKLEWLSTSRLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLF 606
>gi|225425406|ref|XP_002271343.1| PREDICTED: uncharacterized protein LOC100248968 [Vitis vinifera]
gi|297738461|emb|CBI27662.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+++F++KS + +N+ S++ GVW + + +LN AF A+ + L+FSVN +
Sbjct: 331 AKFFVIKSYSEDNVHKSIKYGVWVSTPNGNKRLNSAFHEAKEKHGNCPIFLLFSVNASAQ 390
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + WK T F VKW + ++ + RH+ N+N P
Sbjct: 391 FCGVAEMVGPVDYDKSVDYWKQDKWTGQ----FPVKWHIIKDVPNSQFRHIILENNDNKP 446
Query: 376 VKISRDCQELEPSIG-EQLAALLYLEPDSELM 406
V SRD QE+E G E L E DS ++
Sbjct: 447 VTNSRDTQEVELEQGNEMLNIFRNYESDSSIL 478
>gi|395752564|ref|XP_002830566.2| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 1 [Pongo
abelii]
Length = 640
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 471 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 530
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 531 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 586
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 587 RDTQEVPLEKAKQVLKII 604
>gi|389744760|gb|EIM85942.1| hypothetical protein STEHIDRAFT_80065 [Stereum hirsutum FP-91666
SS1]
Length = 734
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 48/64 (75%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSVQ+G+WATQR NE L++AF ++++V LIF VN++ F G A+M
Sbjct: 359 RYFILKSLTQFDLDLSVQRGLWATQRHNEGILDQAFRTSKDVFLIFGVNKSGEFYGYARM 418
Query: 323 TSKI 326
I
Sbjct: 419 AGPI 422
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G F ++W++ L F +TRHLRNP+N VK+SRD E+EP +G++L
Sbjct: 648 WGEPFKIEWVRTDRLPFFRTRHLRNPWNHGREVKVSRDGTEIEPGVGKEL 697
>gi|332858985|ref|XP_003317110.1| PREDICTED: YTH domain family protein 1 [Pan troglodytes]
gi|397477161|ref|XP_003809947.1| PREDICTED: YTH domain family protein 1 [Pan paniscus]
gi|426392442|ref|XP_004062559.1| PREDICTED: YTH domain family protein 1 isoform 3 [Gorilla gorilla
gorilla]
Length = 509
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 340 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 399
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 400 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 455
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 456 RDTQEVPLEKAKQVLKII 473
>gi|71016131|ref|XP_758871.1| hypothetical protein UM02724.1 [Ustilago maydis 521]
gi|46098389|gb|EAK83622.1| hypothetical protein UM02724.1 [Ustilago maydis 521]
Length = 1010
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF-DSAEN--VILIFSVNRTRHFQG 318
+R+F++KS +++ S++ +WA+ +L++AF +SA N + L +SVN + HF G
Sbjct: 726 ARFFVIKSYTEDDVHKSLKYEIWASTDKGNQRLDKAFRESAHNSPIYLFYSVNASGHFCG 785
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN-ENLPVK 377
A+M + + + W + F V+W+ + +L ++ RH+R E PV
Sbjct: 786 MAQMLTPLDYATSSNVWAQ---DGKWKGTFKVRWIYVKDLPNNQLRHIRLTNTPECKPVT 842
Query: 378 ISRDCQELEPSIGEQLAALL 397
SRD QEL P G ++ ++
Sbjct: 843 QSRDTQELTPEAGREVLRIM 862
>gi|432865672|ref|XP_004070557.1| PREDICTED: YTH domain family protein 1-like isoform 1 [Oryzias
latipes]
Length = 612
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 428 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMNGKGPVYLLFSVNGSGHFCGV 487
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 488 AEMRSPVDYGTSAGVW----AQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNS 543
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 544 RDTQEVPLEKAKQVLKII 561
>gi|24649883|ref|NP_733067.1| CG6422, isoform B [Drosophila melanogaster]
gi|23172237|gb|AAN14031.1| CG6422, isoform B [Drosophila melanogaster]
gi|372466641|gb|AEX93133.1| FI18276p1 [Drosophila melanogaster]
Length = 699
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRH 315
G +R+F++KS + +++ S++ +W + +L++AF N++L FSVN + H
Sbjct: 379 GSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGH 438
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + + + W + F VKW+ + ++ RH+R NEN
Sbjct: 439 FCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKS 494
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
V SRD QE+ G ++ +L+ S + K++EE+ P
Sbjct: 495 VTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRP 545
>gi|444519075|gb|ELV12559.1| YTH domain family protein 2 [Tupaia chinensis]
Length = 487
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 80/161 (49%), Gaps = 7/161 (4%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 248 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 307
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 308 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 363
Query: 380 RDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEK 420
RD QE+ +Q+ ++ + + + KR+EE+
Sbjct: 364 RDTQEVPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEE 404
>gi|5360085|gb|AAD42861.1|AF155095_1 NY-REN-2 antigen [Homo sapiens]
gi|6449083|gb|AAF08813.1|AF192968_1 high-glucose-regulated protein 8 [Homo sapiens]
gi|197692371|dbj|BAG70149.1| high glucose-regulated protein 8 [Homo sapiens]
gi|197692669|dbj|BAG70298.1| high glucose-regulated protein 8 [Homo sapiens]
Length = 570
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 527 RDTQEVPLEKAKQVLKII 544
>gi|395330818|gb|EJF63200.1| hypothetical protein DICSQDRAFT_153789 [Dichomitus squalens
LYAD-421 SS1]
Length = 716
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSV++G+WATQR NE L++AF +++ V LIFSVN++ F G AKM
Sbjct: 351 RYFILKSLTQFDLDLSVEKGLWATQRHNEGILDQAFRTSKEVYLIFSVNKSGEFYGYAKM 410
Query: 323 TSKIGGSVGGGNW 335
I +W
Sbjct: 411 AGPIMRGEARVSW 423
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G +F V+W++ L F +TRHLRNP+N + VK+SRD ELEP++G+ L
Sbjct: 618 WGESFKVEWIRTERLPFTRTRHLRNPWNHDREVKVSRDGTELEPTVGQAL 667
>gi|154308552|ref|XP_001553612.1| hypothetical protein BC1G_08336 [Botryotinia fuckeliana B05.10]
Length = 545
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 251 NRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSV 310
+R++ PL + ++F+VKS E+LELSV+ G+WATQ NE LN+A+ +A+NV LIFS
Sbjct: 299 DRDSPPLTK--DKFFVVKSLTVEDLELSVRNGIWATQTHNEEALNKAYQAADNVYLIFSA 356
Query: 311 NRTRHFQGCAKMTSKI 326
N++ + G A+M S I
Sbjct: 357 NKSGEYFGYARMISPI 372
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEP 401
+G+ F ++W+ L F++TR LRNP+N N VKI+RD ELE SIG++L L + P
Sbjct: 454 WGKPFKLEWISTTRLPFYRTRGLRNPWNSNREVKIARDGTELETSIGKRLVGLFHRVP 511
>gi|429852330|gb|ELA27471.1| yt521-b-like splicing [Colletotrichum gloeosporioides Nara gc5]
Length = 617
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++F++KS E+LELSV+ G+WATQ NE LN AF S +NV L+FS N++ + G A+M
Sbjct: 379 KFFVLKSLTVEDLELSVRTGIWATQSHNEETLNGAFQSVDNVYLVFSANKSGEYFGYARM 438
Query: 323 TSKI 326
TS I
Sbjct: 439 TSSI 442
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 529 WGKPFKLEWLSTARLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLF 582
>gi|21356147|ref|NP_651322.1| CG6422, isoform A [Drosophila melanogaster]
gi|442621033|ref|NP_001262943.1| CG6422, isoform D [Drosophila melanogaster]
gi|7301251|gb|AAF56381.1| CG6422, isoform A [Drosophila melanogaster]
gi|17862686|gb|AAL39820.1| LD44979p [Drosophila melanogaster]
gi|220946400|gb|ACL85743.1| CG6422-PA [synthetic construct]
gi|220956044|gb|ACL90565.1| CG6422-PA [synthetic construct]
gi|440217874|gb|AGB96323.1| CG6422, isoform D [Drosophila melanogaster]
Length = 700
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRH 315
G +R+F++KS + +++ S++ +W + +L++AF N++L FSVN + H
Sbjct: 380 GSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGH 439
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + + + W + F VKW+ + ++ RH+R NEN
Sbjct: 440 FCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKS 495
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
V SRD QE+ G ++ +L+ S + K++EE+ P
Sbjct: 496 VTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRP 546
>gi|432865676|ref|XP_004070558.1| PREDICTED: YTH domain family protein 1-like isoform 2 [Oryzias
latipes]
Length = 597
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 428 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMNGKGPVYLLFSVNGSGHFCGV 487
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 488 AEMRSPVDYGTSAGVW----AQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNS 543
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 544 RDTQEVPLEKAKQVLKII 561
>gi|161078590|ref|NP_001097905.1| CG6422, isoform C [Drosophila melanogaster]
gi|158030374|gb|ABW08751.1| CG6422, isoform C [Drosophila melanogaster]
Length = 694
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRH 315
G +R+F++KS + +++ S++ +W + +L++AF N++L FSVN + H
Sbjct: 374 GSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGH 433
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + + + W + F VKW+ + ++ RH+R NEN
Sbjct: 434 FCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKS 489
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
V SRD QE+ G ++ +L+ S + K++EE+ P
Sbjct: 490 VTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRP 540
>gi|25012679|gb|AAN71434.1| RE55836p [Drosophila melanogaster]
Length = 699
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRH 315
G +R+F++KS + +++ S++ +W + +L++AF N++L FSVN + H
Sbjct: 379 GSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGH 438
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + + + W + F VKW+ + ++ RH+R NEN
Sbjct: 439 FCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDVPNGTLRHIRLENNENKS 494
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
V SRD QE+ G ++ +L+ S + K++EE+ P
Sbjct: 495 VTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQEEEVSSKRP 545
>gi|380488563|emb|CCF37288.1| hypothetical protein CH063_08662 [Colletotrichum higginsianum]
Length = 606
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 47/64 (73%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELS + G+WATQ NE LN AF++ +NV L+FS N++ + G A+M
Sbjct: 366 KFFILKSLTVEDLELSAKTGIWATQSHNEETLNAAFNAVDNVYLVFSANKSGEYFGYARM 425
Query: 323 TSKI 326
TS+I
Sbjct: 426 TSQI 429
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 338 AHGTAH-YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAAL 396
A GTA +G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 512 ADGTAKAWGKPFKLEWLSTARLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGL 571
Query: 397 L 397
Sbjct: 572 F 572
>gi|34782977|gb|AAH16920.2| YTHDF1 protein, partial [Homo sapiens]
Length = 462
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 293 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 352
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 353 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 408
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 409 RDTQEVPLEKAKQVLKII 426
>gi|456754374|gb|JAA74279.1| YTH domain family, member 1 [Sus scrofa]
Length = 565
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 396 RVFIIKSYSEDDVHRSIKYSIWCSTEHGNRRLDSAFRALGSKGPVYLLFSVNGSGHFCGV 455
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 456 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 511
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 512 RDTQEVPLEKAKQVLKII 529
>gi|395333792|gb|EJF66169.1| YTH-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 795
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+R+F++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 515 FARFFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 574
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 575 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNASLRHIRLNNTQERKPV 630
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 631 TNSRDTQELLPDAGQEMLRIFHTHP 655
>gi|15128561|dbj|BAB62751.1| dermatomyositis associated with cancer putative autoantigen-1 [Homo
sapiens]
Length = 437
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 268 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 327
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 328 AEMKSPVDYGTSAGVW----SQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 383
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 384 RDTQEVPLEKAKQVLKII 401
>gi|388853346|emb|CCF52966.1| uncharacterized protein [Ustilago hordei]
Length = 1020
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 7/136 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF-DSAEN--VILIFSVNRTRHFQG 318
+R+F++KS +++ S++ +WA+ +L++AF +SA N + L +SVN + HF G
Sbjct: 722 ARFFVIKSYTEDDVHKSLKYEIWASTDKGNQRLDKAFRESAHNGPIYLFYSVNASGHFCG 781
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN-ENLPVK 377
A+M + + + W + F V+W+ + +L ++ RH+R E PV
Sbjct: 782 MAQMLTPLDYATSSNVWAQ---DGKWKGTFKVRWIYVKDLPNNQLRHIRLTNTPECKPVT 838
Query: 378 ISRDCQELEPSIGEQL 393
SRD QEL P G ++
Sbjct: 839 QSRDTQELTPEAGREV 854
>gi|156054094|ref|XP_001592973.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980]
gi|154703675|gb|EDO03414.1| hypothetical protein SS1G_05895 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 310
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR LC KG+ C FLH+++ +MP C FF G C D C+Y H + + C
Sbjct: 137 VCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGDECLYLHVDPASKVGNCP 196
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C +H++
Sbjct: 197 HYDKGFCPLGPRCSKKHIR 215
>gi|242804168|ref|XP_002484320.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
gi|218717665|gb|EED17086.1| high-affinity glucose transporter, putative [Talaromyces stipitatus
ATCC 10500]
Length = 805
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS + +AS P + VC+H+L+ LC KG C +LH+Y+ RMP C
Sbjct: 615 HPTPSRVTTSSTNASGLAP----SVTHGSLVCKHFLKGLCKKGFKCEYLHEYNLRRMPEC 670
Query: 107 RFFRLFGEC-REQDCVYKHTNEDIK--ECNMYKLGFCPNGPDCRYRHVK 152
F G C +DC+Y H E+ + C Y GFCP GP C +HV+
Sbjct: 671 ASFSRSGYCPNGEDCLYHHVRENARLPRCEHYDRGFCPLGPICAKQHVR 719
>gi|67970290|dbj|BAE01488.1| unnamed protein product [Macaca fascicularis]
Length = 380
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 211 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 270
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 271 AEMKSPVDYGTSAGVW----SQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 326
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 327 RDTQEVPLEKAKQVLKII 344
>gi|195573691|ref|XP_002104825.1| GD18245 [Drosophila simulans]
gi|194200752|gb|EDX14328.1| GD18245 [Drosophila simulans]
Length = 596
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 11/188 (5%)
Query: 246 LPNQTNRNATPL---PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE 302
L ++ N N L G +R+F++KS + +++ S++ +W + +L++AF
Sbjct: 259 LKDKNNYNPKALDLKKAGSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERH 318
Query: 303 ----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCEL 358
N++L FSVN + HF G A+M + + + W + F VKW+ + ++
Sbjct: 319 EEGGNIMLFFSVNGSGHFCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDV 374
Query: 359 SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREE 418
RH+R NEN V SRD QE+ G ++ +L+ S + K++E
Sbjct: 375 PNGMLRHIRLENNENKSVTNSRDTQEVPNDKGIEVLQILHSYNHSTSIFDDFFHYEKKQE 434
Query: 419 EKAKGVNP 426
E+ P
Sbjct: 435 EEVSSKRP 442
>gi|115477753|ref|NP_001062472.1| Os08g0556000 [Oryza sativa Japonica Group]
gi|42407463|dbj|BAD10396.1| putative rubisco subunit binding-protein beta subunit [Oryza sativa
Japonica Group]
gi|42407930|dbj|BAD09069.1| putative rubisco subunit binding-protein beta subunit [Oryza sativa
Japonica Group]
gi|113624441|dbj|BAF24386.1| Os08g0556000 [Oryza sativa Japonica Group]
Length = 624
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 385 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQ 444
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 445 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 500
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 501 VTNSRDTQEVKLEQGMEMLKIF 522
>gi|74188193|dbj|BAE25772.1| unnamed protein product [Mus musculus]
Length = 584
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 9/165 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S V L+FSVN + HF G
Sbjct: 411 RVFIIKSYSDDDIHRSIKYNIWCSTEHGNKRLDAAYRSMNGKGPVYLLFSVNGSGHFCGV 470
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 471 AEMKSAVDYNTCAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 526
Query: 380 RDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAK 422
RD QE +Q+ ++ Y S S + + EEE K
Sbjct: 527 RDTQEEPLEKAKQVLKIIASYKHTTSIFDDFSHYEKRQEEEESVK 571
>gi|390597737|gb|EIN07136.1| YTH-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 741
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 477 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 536
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH++ N E PV
Sbjct: 537 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNANLRHIKLNNTQERKPV 592
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 593 TNSRDTQELLPEAGQEMLRIFHTHP 617
>gi|392567079|gb|EIW60254.1| YTH-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 816
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+R+F++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 535 FARFFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 594
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH+R N E PV
Sbjct: 595 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNAGLRHIRLNNTQERKPV 650
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 651 TNSRDTQELLPDAGQEMLRIFHTHP 675
>gi|170050799|ref|XP_001861474.1| YTH domain protein [Culex quinquefasciatus]
gi|167872276|gb|EDS35659.1| YTH domain protein [Culex quinquefasciatus]
Length = 730
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 13/173 (7%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHF 316
++R+F++KS + +++ S++ +W + +L++A+ E V L FSVN + HF
Sbjct: 350 LARFFVIKSYSEDDIHRSIKYEIWCSTEHGNQRLDQAYREREEKGGMVYLFFSVNGSGHF 409
Query: 317 QGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPV 376
G A+M + + + W + F V+W+ + ++ + R +R NEN P+
Sbjct: 410 CGIAQMMTAVDYNSISSVWS----QDKWKGTFKVRWIYVKDVPNGQLRQVRLENNENKPI 465
Query: 377 KISRDCQELEPSIGEQLAALLYLEPDSELMAI---SVAAEAKREEEKAKGVNP 426
SRD QE+ + G L AL + M+I + E ++ EE K P
Sbjct: 466 TNSRDTQEVPNAKG--LQALKIIHSYKHTMSIFDDFIHYEQRQLEEDTKKHEP 516
>gi|390603548|gb|EIN12940.1| hypothetical protein PUNSTDRAFT_111301 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 905
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 54/79 (68%), Gaps = 3/79 (3%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFI+KS + +L+LSV++G+WATQ+ NE L++A+ ++++V LIF VN++ F G A+M
Sbjct: 506 RYFILKSLTQYDLDLSVERGLWATQKHNEDILDKAYRTSKDVFLIFGVNKSGEFYGYARM 565
Query: 323 TSKIGGSVGGGNWKYAHGT 341
I G G +A GT
Sbjct: 566 AGPIHGE---GRTSWASGT 581
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
+G +F V+W++ L F +TRHLRNP+N++ VK+SRD ELEP +G+ L
Sbjct: 805 WGGSFKVEWIRTERLPFWRTRHLRNPWNQDREVKVSRDGTELEPGVGQAL 854
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM
1558]
Length = 346
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 71 RSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDI 129
R + TVC+H+LR+LC GD C + H ++ MPVC +F + G+C +C+Y H +
Sbjct: 95 REKKMTVCKHYLRNLCKMGDNCEYTHDFNLRTMPVCVWFVMAGKCELGGECLYYHPRDRR 154
Query: 130 KECNMYKLGFCPNGPDCRYRHVK 152
EC Y GFC GP+C RH++
Sbjct: 155 VECPDYNRGFCRLGPECPRRHIR 177
>gi|301610327|ref|XP_002934690.1| PREDICTED: YTH domain family protein 3 [Xenopus (Silurana)
tropicalis]
Length = 493
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+ R FIVKS + +++ S++ VW + +L+ A+ S + L+FSVN + HF
Sbjct: 326 LGRVFIVKSYSEDDIHRSIKYNVWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFC 385
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + + G W + F V+WL + ++ + RH+R N+N PV
Sbjct: 386 GVAEMRSAVDYNTCAGVWS----QDKWKGRFDVRWLFVKDVPNGQLRHIRLENNDNKPVT 441
Query: 378 ISRDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGV 424
SRD QE+ Q+ ++ Y S S + + EE+ K V
Sbjct: 442 NSRDTQEVPLEKARQVLRIIASYKHTTSIFDDFSHYEKRQEEEDSVKKV 490
>gi|317147582|ref|XP_001822235.2| ARF GTPase activator (Csx2) [Aspergillus oryzae RIB40]
Length = 1003
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQ 317
P+ +RYFIVKS + ++LELS Q G+WATQ NE LN A+ +A+NV L+FS N++ +
Sbjct: 793 PRMPNRYFIVKSLSMDDLELSRQSGIWATQAHNEGNLNHAYQTADNVYLVFSANKSGEYY 852
Query: 318 GCAKMTSKI 326
G A+M S I
Sbjct: 853 GYARMVSPI 861
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
G G+ F ++WL + F++TR LRNP+N N +KI+RD E+EP++GE+L L +
Sbjct: 940 GFQSIGKPFRIQWLSTERVPFYRTRGLRNPWNANREIKIARDGTEIEPAVGERLVQLFH 998
>gi|50550735|ref|XP_502840.1| YALI0D14982p [Yarrowia lipolytica]
gi|74634534|sp|Q6C922.1|YTH1_YARLI RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49648708|emb|CAG81028.1| YALI0D14982p [Yarrowia lipolytica CLIB122]
Length = 193
Score = 76.3 bits (186), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 55 AAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGE 114
+ PD AP + VC+HWLR LC KG C FLH+Y+ +MP C+F+ G
Sbjct: 44 SCPDKHLAPT-------FLNKIVCKHWLRGLCKKGLNCEFLHEYNLQKMPECQFYVKNGF 96
Query: 115 CREQ-DCVYKHTN--EDIKECNMYKLGFCPNGPDCRYRHVK 152
C + DC Y H + I C Y+ GFC GP+C +H++
Sbjct: 97 CTQSPDCQYLHIDPASKIPVCFNYEKGFCKMGPECSRKHIR 137
>gi|154321443|ref|XP_001560037.1| hypothetical protein BC1G_01596 [Botryotinia fuckeliana B05.10]
Length = 260
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTNEDIK--EC 132
VC+HWLR LC KG+ C FLH+++ +MP C FF G C D C+Y H + K C
Sbjct: 86 MVCKHWLRGLCKKGETCEFLHEFNLRKMPECNFFVKNGYCSNGDECLYLHVDPASKMGNC 145
Query: 133 NMYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C +H++
Sbjct: 146 PHYDKGFCPLGPRCSKKHIR 165
>gi|448082340|ref|XP_004195116.1| Piso0_005659 [Millerozyma farinosa CBS 7064]
gi|359376538|emb|CCE87120.1| Piso0_005659 [Millerozyma farinosa CBS 7064]
Length = 268
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRHFQ 317
SR+F++KS N ++ S++ +W + +LN+A+ A +V L FSVN + HF
Sbjct: 128 SRFFVIKSYNAVDVGASIENKIWTSTNLGNKRLNKAYCEARADHGSVFLFFSVNCSGHFC 187
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G +M KI S W + + F V WL + ++ +HLRNP NE+ P+
Sbjct: 188 GLVEMKDKIDFSRTSSVWV---EKSRWKGIFPVDWLIVKDIPNRYFQHLRNPLNEHKPIS 244
Query: 378 ISRDCQELEPSIGEQLAAL 396
SRD QE+ I + +
Sbjct: 245 NSRDTQEIPYDIAVSMLKI 263
>gi|195354728|ref|XP_002043848.1| GM17761 [Drosophila sechellia]
gi|194129086|gb|EDW51129.1| GM17761 [Drosophila sechellia]
Length = 700
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 260 GISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAE----NVILIFSVNRTRH 315
G +R+F++KS + +++ S++ +W + +L++AF N++L FSVN + H
Sbjct: 380 GSARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDDAFKERHEEGGNIMLFFSVNGSGH 439
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + + + W + F VKW+ + ++ RH+R NEN
Sbjct: 440 FCGMAQMMTPVDYNSTSSVW----SQDKWRGKFKVKWIYVKDVPNGMLRHIRLENNENKS 495
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNP 426
V SRD QE+ G ++ +L+ S + K++EE+ P
Sbjct: 496 VTNSRDTQEVPNDKGIEVLQILHSYNHSMSIFDDFFHYEKKQEEQVSSKRP 546
>gi|125604298|gb|EAZ43623.1| hypothetical protein OsJ_28244 [Oryza sativa Japonica Group]
Length = 696
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 457 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQ 516
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 517 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 572
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 573 VTNSRDTQEVKLEQGMEMLKIF 594
>gi|125562517|gb|EAZ07965.1| hypothetical protein OsI_30219 [Oryza sativa Indica Group]
Length = 695
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 456 ARFFIIKSYSEDNVHKSIKYGVWASTTNGNKKLDSAYREAKEKEEHCPIFLLFSVNASAQ 515
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 516 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 571
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 572 VTNSRDTQEVKLEQGMEMLKIF 593
>gi|348503209|ref|XP_003439158.1| PREDICTED: YTH domain family protein 1-like [Oreochromis niloticus]
Length = 609
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ +S V L+FSVN + HF G
Sbjct: 429 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAYRAMNSKGPVYLLFSVNGSGHFCGV 488
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 489 AEMRSPVDYGTSAGVW----AQDKWKGKFDVNWLFVKDVPNSQLRHIRLENNDNKPVTNS 544
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 545 RDTQEVPLEKAKQVLKII 562
>gi|123478691|ref|XP_001322507.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121905354|gb|EAY10284.1| hypothetical protein TVAG_047060 [Trichomonas vaginalis G3]
Length = 166
Score = 75.9 bits (185), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKH--TN 126
R SF Q VC W+ + C+ GD C LH+YD RM C+F+ + EC + +C+++H T+
Sbjct: 45 RNSFHQVVCDKWVNTHCVHGDRCQSLHEYDIDRMKKCQFWEKYHECSNKFECIFRHELTD 104
Query: 127 EDIKECNMYKLGFCPNGPDCRYRH 150
+C Y G+C +G C+ +H
Sbjct: 105 RIGTDCQYYIRGYCKHGDKCKRKH 128
>gi|350638879|gb|EHA27234.1| hypothetical protein ASPNIDRAFT_141605 [Aspergillus niger ATCC
1015]
Length = 307
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
SRYFIVKS ++LELS Q +WATQ NE +LNEA+++A++V LIFS N++ + G A+
Sbjct: 122 SRYFIVKSLTVDDLELSRQNNIWATQTHNEKQLNEAYENADDVYLIFSANKSGEYYGYAR 181
Query: 322 MTSKI 326
M S I
Sbjct: 182 MMSPI 186
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 348 FSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
F ++WL + FH+TR LRNP+N N VKI+RD E+EP +G +L L +
Sbjct: 257 FRIRWLSTTRVPFHRTRGLRNPWNSNREVKIARDGTEIEPEVGWKLLQLFH 307
>gi|432936791|ref|XP_004082281.1| PREDICTED: YTH domain family protein 2-like [Oryzias latipes]
Length = 636
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 446 RVFIIKSYSEDDIHRSIKYNIWCSTEHGNKRLDGAYRSLGGKGPLYLLFSVNGSGHFCGV 505
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F V+W+ + ++ + RH+R NEN PV S
Sbjct: 506 AEMRSPVDYNTSAGVWS----QDKWKGRFDVRWIFVKDVPNSQLRHIRLENNENKPVTNS 561
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ Q+ ++
Sbjct: 562 RDTQEVPLDKARQVLKII 579
>gi|21740024|emb|CAD39029.1| hypothetical protein [Homo sapiens]
Length = 364
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 195 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 254
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 255 AEMKSPVDYGTSAGVW----SQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 310
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 311 RDTQEVPLEKAKQVLKII 328
>gi|395511083|ref|XP_003759791.1| PREDICTED: YTH domain family protein 3 [Sarcophilus harrisii]
Length = 587
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 419 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 478
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 479 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 534
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 535 RDTQEVPLEKAKQVLKII 552
>gi|426241845|ref|XP_004014793.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 1 [Ovis
aries]
Length = 786
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 617 RVFIIKSYSEDDVHRSIKYSLWCSTEHGNRRLDSAFRALGSKGPVYLLFSVNGSGHFCGV 676
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ + RH+R N+N PV S
Sbjct: 677 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNS 732
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ Q+ ++
Sbjct: 733 RDTQEVPLEKARQVLRII 750
>gi|327269777|ref|XP_003219669.1| PREDICTED: YTH domain family protein 3-like [Anolis carolinensis]
Length = 583
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 415 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 474
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 475 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 530
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 531 RDTQEVPLEKAKQVLKII 548
>gi|355729605|gb|AES09924.1| YTH domain family, member 1 [Mustela putorius furo]
Length = 269
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 73/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF +A + V L+FSVN + HF G
Sbjct: 101 RVFIIKSYSEDDVHRSIKYSIWCSTEHGNRRLDGAFRAAGSRAPVYLLFSVNGSGHFCGL 160
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 161 AEMKSPVDYGASAGVW----AQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 216
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 217 RDTQEVPLEKAKQVLKII 234
>gi|195403255|ref|XP_002060209.1| GJ14120 [Drosophila virilis]
gi|194147387|gb|EDW63100.1| GJ14120 [Drosophila virilis]
Length = 686
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 240 QNLPNGLPNQTNRNATPL---PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 296
Q L + L ++ N N + + +R+F++KS + +++ S++ +W + +L++
Sbjct: 338 QILLDELKDKNNYNPSEIDLEKATAARFFVIKSYSEDDIHRSIKYEIWCSTDHGNKRLDD 397
Query: 297 AFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKW 352
AF +++L FSVN + HF G A+M + + + W + F VKW
Sbjct: 398 AFKERHKGGGHILLFFSVNGSGHFCGMAQMMTSVDYNSTSSVW----SQDKWKGKFKVKW 453
Query: 353 LKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAA 412
+ + ++ K RH+R N+N V SRD QE+ + G ++ +L+ S + +
Sbjct: 454 IYVKDVPNGKLRHIRLENNDNKSVTHSRDTQEIPNTKGIEVLQILHSYRHSTSIFDDFSH 513
Query: 413 EAKREEEKAKGVNP 426
K++EE+ P
Sbjct: 514 YEKKQEEEVSSKRP 527
>gi|57530377|ref|NP_001006391.1| YTH domain family protein 3 [Gallus gallus]
gi|53129258|emb|CAG31372.1| hypothetical protein RCJMB04_5j2 [Gallus gallus]
Length = 583
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 415 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 474
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 475 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 530
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 531 RDTQEVPLEKAKQVLKII 548
>gi|159164021|pdb|2D9N|A Chain A, Solution Structure Of Ccch Type Zinc-Finger Domain 2 In
Cleavage And Polyadenylation Specificity Factor
Length = 77
Score = 75.9 bits (185), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/67 (47%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 68 SGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNE 127
SG + VC+HWLR LC KGD C FLH+YD ++MP C F+ FGEC ++C + H +
Sbjct: 3 SGSSGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDP 62
Query: 128 D--IKEC 132
+ IK+C
Sbjct: 63 ESKIKDC 69
>gi|326917684|ref|XP_003205126.1| PREDICTED: YTH domain family protein 3-like [Meleagris gallopavo]
Length = 584
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 416 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 475
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 476 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 531
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 532 RDTQEVPLEKAKQVLKII 549
>gi|380019822|ref|XP_003693800.1| PREDICTED: YTH domain family protein 1-like [Apis florea]
Length = 585
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 370 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYKEASREGAPLYLFFSVNGSGHFC 429
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 430 GMAQMVSSVDYKSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVT 485
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +++ E+ + P N
Sbjct: 486 NSRDAQEVPHAKGVTVLRILHTYRHSTSIFDDFGHYERKQAEEDQRKAPAN 536
>gi|365982091|ref|XP_003667879.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
gi|343766645|emb|CCD22636.1| hypothetical protein NDAI_0A04800 [Naumovozyma dairenensis CBS 421]
Length = 215
Score = 75.5 bits (184), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 75 QTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQ-DCVYKHTN--EDIKE 131
+ VC+HWLR LC K D C +LH+Y+ +MP C F+ G C + +C Y H + I
Sbjct: 64 KIVCKHWLRGLCKKNDQCEYLHEYNLRKMPECVFYSKNGYCTQTPECQYLHIDPMSKIPR 123
Query: 132 CNMYKLGFCPNGPDCRYRHVK 152
C Y +GFC G C RH+K
Sbjct: 124 CEDYDVGFCSLGDGCPRRHIK 144
>gi|296480891|tpg|DAA23006.1| TPA: YTH domain family 1-like isoform 1 [Bos taurus]
Length = 559
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 390 RVFIIKSYSEDDVHRSIKYSLWCSTEHGNRRLDSAFRALGSKGPVYLLFSVNGSGHFCGV 449
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ + RH+R N+N PV S
Sbjct: 450 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNS 505
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ Q+ ++
Sbjct: 506 RDTQEVPLEKARQVLRII 523
>gi|397522811|ref|XP_003831444.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 3 [Pan
paniscus]
Length = 655
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 487 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 546
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 547 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 602
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 603 RDTQEVPLEKAKQVLKII 620
>gi|148237173|ref|NP_001087120.1| YTH domain family, member 2 [Xenopus laevis]
gi|50418347|gb|AAH78013.1| Ythdf2-prov protein [Xenopus laevis]
Length = 493
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+ R FIVKS + +++ S++ +W + +L+ A+ S + L+FSVN + HF
Sbjct: 326 LGRVFIVKSYSEDDIHRSIKYNIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFC 385
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + + G W + F V+WL + ++ + RH+R N+N PV
Sbjct: 386 GVAEMRSAVDYNTCAGVWS----QDKWKGRFDVRWLFVKDVPNGQLRHIRLENNDNKPVT 441
Query: 378 ISRDCQELEPSIGEQLAALL--YLEPDSELMAISVAAEAKREEEKAKGV 424
SRD QE+ Q+ ++ Y S S + + EE+ K V
Sbjct: 442 NSRDTQEVPLEKARQVLRIIASYKHTTSIFDDFSHYEKRQEEEDSVKKV 490
>gi|410899865|ref|XP_003963417.1| PREDICTED: YTH domain family protein 1-like [Takifugu rubripes]
Length = 616
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ + V L+FSVN + HF G
Sbjct: 435 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAYRAMNAKGPVYLLFSVNGSGHFCGV 494
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 495 AEMRSPVDYGTSAGVW----AQDKWKGKFDVDWLFVKDVPNSQLRHIRLENNDNKPVTNS 550
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 551 RDTQEVPLEKAKQVLKII 568
>gi|300794114|ref|NP_001178345.1| YTH domain family protein 1 [Bos taurus]
gi|296480892|tpg|DAA23007.1| TPA: YTH domain family 1-like isoform 2 [Bos taurus]
Length = 561
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 392 RVFIIKSYSEDDVHRSIKYSLWCSTEHGNRRLDSAFRALGSKGPVYLLFSVNGSGHFCGV 451
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ + RH+R N+N PV S
Sbjct: 452 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNS 507
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ Q+ ++
Sbjct: 508 RDTQEVPLEKARQVLRII 525
>gi|41054079|ref|NP_956164.1| YTH domain family protein 3 [Danio rerio]
gi|28277558|gb|AAH45342.1| YTH domain family 3 [Danio rerio]
Length = 600
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 432 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAYRSLSAKGPLYLLFSVNGSGHFCGV 491
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 492 AEMKSTVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 547
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 548 RDTQEVPLEKAKQVLKII 565
>gi|414870147|tpg|DAA48704.1| TPA: hypothetical protein ZEAMMB73_063582 [Zea mays]
Length = 516
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ SV+ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 279 ARFFIIKSYSEDNVHKSVKYGVWASTTNGNKKLDSAYREAKEKGEHCPIFLLFSVNASAQ 338
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 339 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 394
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
V SRD QE++ G ++ + D +I E E EKA
Sbjct: 395 VTNSRDTQEVKLEQGMEMLKIFKNHDDD--ASILDDFEFYEEREKA 438
>gi|242079667|ref|XP_002444602.1| hypothetical protein SORBIDRAFT_07g024500 [Sorghum bicolor]
gi|241940952|gb|EES14097.1| hypothetical protein SORBIDRAFT_07g024500 [Sorghum bicolor]
Length = 609
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ SV+ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 372 ARFFIIKSYSEDNVHKSVKYGVWASTTNGNKKLDLAYREAKEKEEHCPIFLLFSVNASAQ 431
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 432 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 487
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G ++ +
Sbjct: 488 VTNSRDTQEVKLEQGLEMLKIF 509
>gi|440891420|gb|ELR45113.1| YTH domain family protein 1, partial [Bos grunniens mutus]
Length = 551
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 382 RVFIIKSYSEDDVHRSIKYSLWCSTEHGNRRLDSAFRALGSKGPVYLLFSVNGSGHFCGV 441
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ + RH+R N+N PV S
Sbjct: 442 AEMKSPVDYGTSAGVWS----QDKWKGKFDVKWIFVKDVPNSQLRHIRLENNDNKPVTNS 497
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ Q+ ++
Sbjct: 498 RDTQEVPLEKARQVLRII 515
>gi|171680319|ref|XP_001905105.1| hypothetical protein [Podospora anserina S mat+]
gi|170939786|emb|CAP65012.1| unnamed protein product [Podospora anserina S mat+]
Length = 664
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+F++KS E+LELSV+ +WATQ NE LN AF ++NV L+FS N++ + G A+M
Sbjct: 408 RFFVLKSLTVEDLELSVRTNIWATQSHNEGTLNNAFKDSDNVYLVFSANKSGEYFGYARM 467
Query: 323 TSKI 326
TS I
Sbjct: 468 TSPI 471
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL L F+KTR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 565 WGKPFRLEWLSTARLPFYKTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLF 618
>gi|157818691|ref|NP_001102016.1| YTH domain family protein 3 [Rattus norvegicus]
gi|149048506|gb|EDM01047.1| YTH domain family 3 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|300795578|ref|NP_001179442.1| YTH domain family protein 3 [Bos taurus]
gi|296480618|tpg|DAA22733.1| TPA: YTH domain family, member 3 [Bos taurus]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|52545694|emb|CAH56224.1| hypothetical protein [Homo sapiens]
gi|117645784|emb|CAL38359.1| hypothetical protein [synthetic construct]
gi|117646538|emb|CAL38736.1| hypothetical protein [synthetic construct]
gi|208965712|dbj|BAG72870.1| YTH domain family, member 3 [synthetic construct]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|417403022|gb|JAA48336.1| Hypothetical protein [Desmodus rotundus]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|344273121|ref|XP_003408375.1| PREDICTED: YTH domain family protein 3 [Loxodonta africana]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|296226575|ref|XP_002758988.1| PREDICTED: YTH domain family protein 3 isoform 1 [Callithrix
jacchus]
gi|403288807|ref|XP_003935577.1| PREDICTED: YTH domain family protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 585
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|116235460|ref|NP_689971.4| YTH domain family protein 3 [Homo sapiens]
gi|197103082|ref|NP_001124613.1| YTH domain family protein 3 [Pongo abelii]
gi|74738853|sp|Q7Z739.1|YTHD3_HUMAN RecName: Full=YTH domain family protein 3
gi|75042665|sp|Q5RFL8.1|YTHD3_PONAB RecName: Full=YTH domain family protein 3
gi|31419299|gb|AAH52970.1| YTH domain family, member 3 [Homo sapiens]
gi|55725145|emb|CAH89439.1| hypothetical protein [Pongo abelii]
gi|119607273|gb|EAW86867.1| YTH domain family, member 3, isoform CRA_b [Homo sapiens]
gi|193785373|dbj|BAG54526.1| unnamed protein product [Homo sapiens]
gi|380811348|gb|AFE77549.1| YTH domain family protein 3 [Macaca mulatta]
gi|383417239|gb|AFH31833.1| YTH domain family protein 3 [Macaca mulatta]
gi|384946230|gb|AFI36720.1| YTH domain family protein 3 [Macaca mulatta]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|410260486|gb|JAA18209.1| YTH domain family, member 3 [Pan troglodytes]
gi|410294562|gb|JAA25881.1| YTH domain family, member 3 [Pan troglodytes]
gi|410353887|gb|JAA43547.1| YTH domain family, member 3 [Pan troglodytes]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|449494191|ref|XP_002197330.2| PREDICTED: YTH domain family protein 3 [Taeniopygia guttata]
Length = 532
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 364 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 423
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 424 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 479
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 480 RDTQEVPLEKAKQVLKII 497
>gi|195504560|ref|XP_002099131.1| GE10748 [Drosophila yakuba]
gi|194185232|gb|EDW98843.1| GE10748 [Drosophila yakuba]
Length = 700
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 95/203 (46%), Gaps = 21/203 (10%)
Query: 232 QGTQTTQM-----QNLPNGLPNQTNRNATPL---PQGISRYFIVKSCNRENLELSVQQGV 283
+ T TT+ Q L + L ++ N N L G +R+F++KS + +++ S++ +
Sbjct: 344 EATSTTEEVPVDPQLLLDELKDKNNYNPKVLDLKKAGSARFFVIKSYSEDDIHRSIKYEI 403
Query: 284 WATQRSNEAKLNEAFDSAE----NVILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAH 339
W + +L++AF N++L FSVN + HF G A+M + + + W
Sbjct: 404 WCSTDHGNKRLDDAFKERHHEGGNIMLFFSVNGSGHFCGMAQMMTAVDYNSTSSVW---- 459
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYL 399
+ F VKW+ + ++ RH+R N+N V SRD QE+ G + L L
Sbjct: 460 SQDKWRGKFKVKWIYVKDVPNPTLRHIRLENNDNKSVTNSRDTQEVPNDKG--IEVLQIL 517
Query: 400 EPDSELMAI---SVAAEAKREEE 419
+ L +I E K+EEE
Sbjct: 518 HSYNHLTSIFDDFFHYEKKQEEE 540
>gi|225543497|ref|NP_001139391.1| YTH domain family protein 3 isoform 2 [Mus musculus]
gi|91208387|sp|Q8BYK6.2|YTHD3_MOUSE RecName: Full=YTH domain family protein 3
gi|44890479|gb|AAH67040.1| Ythdf3 protein [Mus musculus]
gi|148702910|gb|EDL34857.1| YTH domain family 3, isoform CRA_a [Mus musculus]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|387019969|gb|AFJ52102.1| YTH domain family protein 3-like [Crotalus adamanteus]
Length = 586
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 418 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 477
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 478 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 533
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 534 RDTQEVPLEKAKQVLKII 551
>gi|74209434|dbj|BAE23284.1| unnamed protein product [Mus musculus]
Length = 596
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 428 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 487
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 488 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTDS 543
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 544 RDTQEVPLEKAKQVLKII 561
>gi|119595712|gb|EAW75306.1| YTH domain family, member 1, isoform CRA_b [Homo sapiens]
Length = 374
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + V L+FSVN + HF G
Sbjct: 205 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 264
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV S
Sbjct: 265 AEMKSPVDYGTSAGVW----SQDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNS 320
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 321 RDTQEVPLEKAKQVLKII 338
>gi|336276075|ref|XP_003352791.1| hypothetical protein SMAC_01625 [Sordaria macrospora k-hell]
gi|380094679|emb|CCC08061.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 321
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDIKECN 133
VC+HWLR LC KG++C FLH+Y+ +MP C FF G C D C+Y H + + C
Sbjct: 101 VCKHWLRGLCKKGESCEFLHEYNLRKMPECNFFVRNGYCSNGDECLYLHIDPLSRLPPCP 160
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y+ GFCP GP C +H +
Sbjct: 161 HYERGFCPLGPRCDKKHFR 179
>gi|193506556|pdb|2RHK|C Chain C, Crystal Structure Of Influenza A Ns1a Protein In Complex
With F2f3 Fragment Of Human Cellular Factor Cpsf30,
Northeast Structural Genomics Targets Or8c And Hr6309a
gi|193506557|pdb|2RHK|D Chain D, Crystal Structure Of Influenza A Ns1a Protein In Complex
With F2f3 Fragment Of Human Cellular Factor Cpsf30,
Northeast Structural Genomics Targets Or8c And Hr6309a
Length = 72
Score = 75.5 bits (184), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 74 RQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIK 130
+ VC+HWLR LC KGD C FLH+YD ++M C F+ FGEC ++C + H + + K
Sbjct: 15 KTVVCKHWLRGLCKKGDQCEFLHEYDMTKMSECYFYSKFGECSNKECPFLHIDPESK 71
>gi|73999134|ref|XP_857911.1| PREDICTED: YTH domain family protein 3 isoform 3 [Canis lupus
familiaris]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|410987179|ref|XP_003999884.1| PREDICTED: YTH domain family protein 3 isoform 1 [Felis catus]
Length = 585
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|242032717|ref|XP_002463753.1| hypothetical protein SORBIDRAFT_01g005500 [Sorghum bicolor]
gi|241917607|gb|EER90751.1| hypothetical protein SORBIDRAFT_01g005500 [Sorghum bicolor]
Length = 565
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 10/142 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+++FI+KS + +N+ S++ VWA+ S KL+ A+ A+ V L+FSVN +
Sbjct: 370 AKFFIIKSYSEDNVHKSIKYNVWASTPSGNKKLDAAYQEAKEKSSSCPVFLLFSVNTSGQ 429
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M ++ + W+ + F VKW + ++ +H+ YNEN P
Sbjct: 430 FVGLAEMVGQVDFNKTVEYWQ----QDKWAGCFPVKWHIVKDIPNSSLKHIILEYNENKP 485
Query: 376 VKISRDCQELEPSIGEQLAALL 397
V SRD QE++ G Q+ +
Sbjct: 486 VTNSRDTQEVKLDQGLQVLKIF 507
>gi|378726080|gb|EHY52539.1| hypothetical protein HMPREF1120_00750 [Exophiala dermatitidis
NIH/UT8656]
Length = 653
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 256 PLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRH 315
P+ + ++F+VKS E+LE SV G+WATQ NE LN+A+ +AENV LIFS N++
Sbjct: 389 PMKKVKEKFFVVKSLTVEDLERSVVSGIWATQAHNEEALNKAYQTAENVYLIFSANKSGE 448
Query: 316 FQGCAKMTSKI 326
+ G A+M S I
Sbjct: 449 YFGYARMESAI 459
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F +KW+ L F++TR LRNP+N N VKI+RD E+EPS+G +L ++ +
Sbjct: 549 FGKPFKIKWMSTDRLPFYRTRGLRNPWNSNREVKIARDGTEIEPSVGRRLVSMFH 603
>gi|44890477|gb|AAH67042.1| YTH domain family 3 [Mus musculus]
Length = 596
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 428 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 487
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 488 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 543
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 544 RDTQEVPLEKAKQVLKII 561
>gi|340719930|ref|XP_003398397.1| PREDICTED: YTH domain family protein 1-like [Bombus terrestris]
Length = 598
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 383 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYKEASCEGAPLYLFFSVNGSGHFC 442
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 443 GMAQMVSPVDYKSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVT 498
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +++ E+ + P N
Sbjct: 499 NSRDAQEVPHAKGITVLRILHTYRHSTSIFDDFGHYERKQAEEDQRKAPSN 549
>gi|406862544|gb|EKD15594.1| hypothetical protein MBM_06222 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 611
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FIVKS E+++LSV+ G+WATQ NE LNEA+ +A NV LIFS N++ + G AKM
Sbjct: 378 KFFIVKSLTVEDMDLSVRNGIWATQSHNEDALNEAYQTAGNVYLIFSANKSGEYFGYAKM 437
Query: 323 TSKI 326
S I
Sbjct: 438 KSPI 441
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEP 401
+G+ F V+W+ L F++TR LRNP+N N VKI+RD ELE S+G++L +L + P
Sbjct: 525 WGKPFQVEWMCTARLPFYRTRGLRNPWNSNREVKIARDGTELETSVGKRLISLFHQLP 582
>gi|66551883|ref|XP_624228.1| PREDICTED: YTH domain family protein 1-like [Apis mellifera]
Length = 587
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 372 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYKEASREGAPLYLFFSVNGSGHFC 431
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 432 GMAQMVSPVDYKSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVT 487
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +++ E+ + P N
Sbjct: 488 NSRDAQEVPHAKGVTVLRILHTYRHSTSIFDDFGHYERKQAEEDQRKAPAN 538
>gi|296226577|ref|XP_002758989.1| PREDICTED: YTH domain family protein 3 isoform 2 [Callithrix
jacchus]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|225543495|ref|NP_766265.3| YTH domain family protein 3 isoform 1 [Mus musculus]
Length = 596
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 428 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 487
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 488 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 543
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 544 RDTQEVPLEKAKQVLKII 561
>gi|194391246|dbj|BAG60741.1| unnamed protein product [Homo sapiens]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|194390230|dbj|BAG61877.1| unnamed protein product [Homo sapiens]
Length = 509
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S V L+FSVN + HF G
Sbjct: 340 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRCMSSKGPVYLLFSVNGSGHFCGV 399
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V+W+ + ++ ++ RH+R N+N PV
Sbjct: 400 AEMKSPVDYGTSAGVWS----QDKWKGKFDVQWIFVKDVPNNQLRHIRLENNDNKPVTNP 455
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 456 RDTQEVPLEKAKQVLKII 473
>gi|354487193|ref|XP_003505758.1| PREDICTED: YTH domain family protein 3 [Cricetulus griseus]
gi|344255093|gb|EGW11197.1| YTH domain family protein 3 [Cricetulus griseus]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|426235564|ref|XP_004011750.1| PREDICTED: YTH domain family protein 3 isoform 2 [Ovis aries]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|26343683|dbj|BAC35498.1| unnamed protein product [Mus musculus]
gi|34785681|gb|AAH57158.1| Ythdf3 protein [Mus musculus]
gi|148702911|gb|EDL34858.1| YTH domain family 3, isoform CRA_b [Mus musculus]
Length = 589
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 421 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 480
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 481 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 536
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 537 RDTQEVPLEKAKQVLKII 554
>gi|149048505|gb|EDM01046.1| YTH domain family 3 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|410987181|ref|XP_003999885.1| PREDICTED: YTH domain family protein 3 isoform 2 [Felis catus]
Length = 588
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 420 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 479
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 480 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 535
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 536 RDTQEVPLEKAKQVLKII 553
>gi|26333099|dbj|BAC30267.1| unnamed protein product [Mus musculus]
Length = 589
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 421 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 480
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W +G VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 481 AEMKSVVDYNAYAGVWSQDKWKGKFG----VKWIFVKDVPNNQLRHIRLENNDNKPVTNS 536
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 537 RDTQEVPLEKAKQVLKII 554
>gi|307165841|gb|EFN60204.1| YTH domain family protein 2 [Camponotus floridanus]
Length = 401
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 186 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREANREGAPLYLFFSVNGSGHFC 245
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH++ NEN PV
Sbjct: 246 GMAQMVSPVDYQCNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVT 301
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +R+ E+ + P N
Sbjct: 302 NSRDAQEVPHAKGVTVLRILHSYRHSTSIFDDFGHYERRQAEEDQRKVPSN 352
>gi|46108554|ref|XP_381335.1| hypothetical protein FG01159.1 [Gibberella zeae PH-1]
Length = 641
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELSV G+WATQ NE LN AF A++V L+FS N++ + G A+M
Sbjct: 409 KFFILKSLTVEDLELSVNTGIWATQSHNEDALNNAFKVADSVYLVFSANKSGEYYGYARM 468
Query: 323 TSKI 326
S+I
Sbjct: 469 VSQI 472
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 38/57 (66%)
Query: 341 TAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
T +G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 554 TKTWGKPFKLEWLSTSRLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLF 610
>gi|297299486|ref|XP_002808527.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 3-like
[Macaca mulatta]
Length = 535
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 367 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 426
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 427 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 482
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 483 RDTQEVPLEKAKQVLKII 500
>gi|349602957|gb|AEP98936.1| YTH domain family protein 1-like protein, partial [Equus caballus]
Length = 249
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF S + V L+FSVN + HF G
Sbjct: 80 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDGAFRSMSSKGPVYLLFSVNGSGHFCGV 139
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 140 AEMKSPVDYGTSAGVW----SQDKWKGKFDVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 195
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 196 RDTQEVPLEKAKQVLKII 213
>gi|108706281|gb|ABF94076.1| YT521-B-like family protein, expressed [Oryza sativa Japonica
Group]
Length = 648
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 451 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 510
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 511 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 566
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 567 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 601
>gi|357129740|ref|XP_003566519.1| PREDICTED: uncharacterized protein LOC100841624 [Brachypodium
distachyon]
Length = 696
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 14/202 (6%)
Query: 247 PNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN--- 303
P+Q NRN + +++F++KS N+ SV+ GVW++ KL+ AF A+
Sbjct: 308 PDQFNRNDFQVVYPNAKFFVIKSWGEANVHKSVKYGVWSSSIQGNKKLDRAFGDAQLIAA 367
Query: 304 -------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLC 356
V L FSVN++ HF G A+M + W + +F V+W +
Sbjct: 368 SSSTTCPVFLFFSVNQSNHFCGVAEMVGPVDFRKNMDFW----SQDRWVGSFPVRWHIIK 423
Query: 357 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKR 416
+ +++ NE PV SRD QE+ G + + +E + +
Sbjct: 424 NIPNVALQYILLQNNEYRPVTFSRDTQEIHYGPGTSMLKIFKATRVNECLLDDFTVYEEE 483
Query: 417 EEEKAKGVNPDNGGDNPDIVPF 438
E K GD P +PF
Sbjct: 484 EARSIKCTTSKLRGDAPRFIPF 505
>gi|403288809|ref|XP_003935578.1| PREDICTED: YTH domain family protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
gi|403288811|ref|XP_003935579.1| PREDICTED: YTH domain family protein 3 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 534
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|296811066|ref|XP_002845871.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
gi|238843259|gb|EEQ32921.1| mRNA 3'-end-processing protein yth1 [Arthroderma otae CBS 113480]
Length = 251
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGEC-REQDCVYKHTNEDIK--ECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H + D K +C
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 148 HYDKGFCPLGPICAKRHVR 166
>gi|408395012|gb|EKJ74200.1| hypothetical protein FPSE_05639 [Fusarium pseudograminearum CS3096]
Length = 641
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELSV G+WATQ NE LN AF A++V L+FS N++ + G A+M
Sbjct: 409 KFFILKSLTVEDLELSVNTGIWATQSHNEDALNNAFKVADSVYLVFSANKSGEYYGYARM 468
Query: 323 TSKI 326
S+I
Sbjct: 469 VSQI 472
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
T +G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 553 ATKTWGKPFKLEWLSTSRLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRRLIGLF 610
>gi|224075964|ref|XP_002304850.1| predicted protein [Populus trichocarpa]
gi|222842282|gb|EEE79829.1| predicted protein [Populus trichocarpa]
Length = 522
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 246 LPNQTNRNATPLPQGI--SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN 303
+P++ N P+ +++FI+KS + +++ ++ VWA+ + KL+ A+ AE
Sbjct: 310 VPDREQYNKADFPEEYDNAKFFIIKSYSEDDVHKCIKYNVWASTPNGNKKLDAAYQEAEQ 369
Query: 304 ------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCE 357
V L+FSVN + F G A+MT ++ W+ T + F VKW + +
Sbjct: 370 KSGGCPVFLLFSVNTSGQFVGLAEMTGRVDFDKSVEYWQQDKWTGY----FPVKWHIVKD 425
Query: 358 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+ +H+ NEN PV SRD QE++ G +L +
Sbjct: 426 VPNSFLKHITLENNENKPVTNSRDTQEVKLEQGLKLIKIF 465
>gi|426235562|ref|XP_004011749.1| PREDICTED: YTH domain family protein 3 isoform 1 [Ovis aries]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|302922349|ref|XP_003053447.1| hypothetical protein NECHADRAFT_89989 [Nectria haematococca mpVI
77-13-4]
gi|256734388|gb|EEU47734.1| hypothetical protein NECHADRAFT_89989 [Nectria haematococca mpVI
77-13-4]
Length = 641
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+LELSV+ G+WATQ NE LN AF A++V L+FS N++ + G A+M
Sbjct: 409 KFFILKSLTVEDLELSVRTGIWATQAHNEDALNTAFKGADSVYLVFSANKSGEYFGYARM 468
Query: 323 TSKI 326
S+I
Sbjct: 469 ASQI 472
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 4/133 (3%)
Query: 265 FIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKMTS 324
F S +L+L AT+ + + ++ + DSA I + A+ S
Sbjct: 482 FAPTSQATSDLDLPKAIPTEATEHAPKGRIID--DSARGTIFWEAEREGSEALSDAESES 539
Query: 325 KIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQE 384
++ S G N GT +G+ F ++WL L F++TR LRNP+N N VKI+RD E
Sbjct: 540 EM--SSGKSNNAEEPGTKTWGKPFKLEWLSTSRLPFYRTRGLRNPWNSNREVKIARDGTE 597
Query: 385 LEPSIGEQLAALL 397
LEPS+G +L L
Sbjct: 598 LEPSVGRRLIGLF 610
>gi|291388038|ref|XP_002710573.1| PREDICTED: YTH domain family, member 3 isoform 3 [Oryctolagus
cuniculus]
gi|426359782|ref|XP_004047143.1| PREDICTED: YTH domain family protein 3 [Gorilla gorilla gorilla]
gi|119607270|gb|EAW86864.1| YTH domain family, member 3, isoform CRA_a [Homo sapiens]
gi|119607271|gb|EAW86865.1| YTH domain family, member 3, isoform CRA_a [Homo sapiens]
gi|119607272|gb|EAW86866.1| YTH domain family, member 3, isoform CRA_a [Homo sapiens]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|108706278|gb|ABF94073.1| YT521-B-like family protein, expressed [Oryza sativa Japonica
Group]
Length = 708
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 452 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 511
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 512 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 567
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 568 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 602
>gi|115450843|ref|NP_001049022.1| Os03g0158500 [Oryza sativa Japonica Group]
gi|108706280|gb|ABF94075.1| YT521-B-like family protein, expressed [Oryza sativa Japonica
Group]
gi|113547493|dbj|BAF10936.1| Os03g0158500 [Oryza sativa Japonica Group]
gi|222624219|gb|EEE58351.1| hypothetical protein OsJ_09476 [Oryza sativa Japonica Group]
Length = 707
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 451 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 510
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 511 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 566
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 567 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 601
>gi|327296479|ref|XP_003232934.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
gi|326465245|gb|EGD90698.1| hypothetical protein TERG_06924 [Trichophyton rubrum CBS 118892]
Length = 251
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIK--ECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H + D K +C
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 148 HYDQGFCPLGPICAKRHVR 166
>gi|402878355|ref|XP_003902853.1| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 3 [Papio
anubis]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|395860945|ref|XP_003802762.1| PREDICTED: YTH domain family protein 3 [Otolemur garnettii]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|187607609|ref|NP_001120433.1| YTH domain family, member 3 [Xenopus (Silurana) tropicalis]
gi|170284988|gb|AAI61192.1| LOC100145519 protein [Xenopus (Silurana) tropicalis]
Length = 572
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 404 RVFIIKSYSEDDIHRSIKYTIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 463
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 464 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWVFVKDVPNNQLRHIRLENNDNKPVTNS 519
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 520 RDTQEVPLEKAKQVLKII 537
>gi|73999148|ref|XP_858199.1| PREDICTED: YTH domain family protein 3 isoform 9 [Canis lupus
familiaris]
gi|345793068|ref|XP_544099.3| PREDICTED: YTH domain family protein 3 isoform 1 [Canis lupus
familiaris]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|326477709|gb|EGE01719.1| mRNA 3'-end-processing protein yth1 [Trichophyton equinum CBS
127.97]
Length = 251
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGEC-REQDCVYKHTNEDIK--ECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H + D K +C
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 148 HYDQGFCPLGPICAKRHVR 166
>gi|383863017|ref|XP_003706979.1| PREDICTED: YTH domain family protein 1-like [Megachile rotundata]
Length = 906
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 690 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYREASREGAPLYLFFSVNGSGHFC 749
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH++ NEN PV
Sbjct: 750 GMAQMVSPVDYQSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIKLENNENKPVT 805
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +++ E+ + P N
Sbjct: 806 NSRDAQEVPHAKGVTVLRILHTYRHSTSIFDDFGHYERKQAEEDQRKAPPN 856
>gi|302502863|ref|XP_003013392.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|302657933|ref|XP_003020677.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
gi|291176956|gb|EFE32752.1| hypothetical protein ARB_00210 [Arthroderma benhamiae CBS 112371]
gi|291184534|gb|EFE40059.1| hypothetical protein TRV_05203 [Trichophyton verrucosum HKI 0517]
Length = 251
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIK--ECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H + D K +C
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 148 HYDQGFCPLGPICAKRHVR 166
>gi|350408518|ref|XP_003488431.1| PREDICTED: YTH domain family protein 1-like [Bombus impatiens]
Length = 599
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----VILIFSVNRTRHFQ 317
+R+F++KS + +++ S++ +W + +L++A+ A + L FSVN + HF
Sbjct: 384 ARFFVIKSYSEDDIHRSIKYEIWCSTEHGNKRLDQAYKEASCEGAPLYLFFSVNGSGHFC 443
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVK 377
G A+M S + W + F V+W+ + ++ + RH+R NEN PV
Sbjct: 444 GMAQMVSPVDYKSNSSVWS----QDKWKGQFRVRWIYVKDVPNVQLRHIRLENNENKPVT 499
Query: 378 ISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKAKGVNPDN 428
SRD QE+ + G + +L+ S + +++ E+ + P N
Sbjct: 500 NSRDAQEVPHAKGITVLRILHTYRHSTSIFDDFGHYERKQAEEDQRKAPSN 550
>gi|328871096|gb|EGG19467.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 286
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 41/86 (47%), Gaps = 25/86 (29%)
Query: 76 TVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKECNMY 135
VC+HWLR LC KGD C FLH+YD ++MP C FF
Sbjct: 84 VVCKHWLRGLCKKGDLCEFLHEYDLAKMPECYFFS------------------------- 118
Query: 136 KLGFCPNGPDCRYRHVKLPGPPPSVE 161
K GFCP GP C+Y H K P +E
Sbjct: 119 KYGFCPEGPKCKYGHPKWEVPKEDLE 144
>gi|218192127|gb|EEC74554.1| hypothetical protein OsI_10095 [Oryza sativa Indica Group]
Length = 707
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 451 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 510
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 511 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 566
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 567 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 601
>gi|320591873|gb|EFX04312.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Grosmannia clavigera kw1407]
Length = 702
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 73 FRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQD-CVYKHTN--EDI 129
F VC+HWLR LC KG+ C FLH+Y+ +MP C FF G C D C+Y H + +
Sbjct: 458 FNSLVCKHWLRGLCKKGEGCEFLHEYNLRKMPECNFFLRNGFCSNGDECLYLHIDPRSKL 517
Query: 130 KECNMY-KLGFCPNGPDCRYRHVK 152
C Y GFC GP C +HV+
Sbjct: 518 PPCPDYDDRGFCALGPRCPKKHVR 541
>gi|431891806|gb|ELK02340.1| YTH domain family protein 3 [Pteropus alecto]
Length = 648
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 423 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 482
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 483 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 538
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 539 RDTQEVPLEKAKQVLKII 556
>gi|410900248|ref|XP_003963608.1| PREDICTED: YTH domain family protein 1-like [Takifugu rubripes]
Length = 694
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ AF + + V L+FSVN + HF G
Sbjct: 509 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDSAFRAMNSKGPVYLLFSVNGSGHFCGV 568
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + G W + F V WL + ++ + RH+R N+N PV S
Sbjct: 569 AEMRSPVDYGTSAGVW----AQDKWKGKFDVNWLFVKDVPNSQLRHIRLENNDNKPVTNS 624
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 625 RDTQEVPLEKAKQVLKII 642
>gi|108706279|gb|ABF94074.1| YT521-B-like family protein, expressed [Oryza sativa Japonica
Group]
Length = 620
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 364 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 423
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 424 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 479
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 480 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 514
>gi|170088508|ref|XP_001875477.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650677|gb|EDR14918.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 798
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 531 FARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 590
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH++ N E PV
Sbjct: 591 GMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNLNLRHIKLNNTQERKPV 646
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 647 TNSRDTQELLPDAGQEMLRIFHTHP 671
>gi|22773231|gb|AAN06837.1| Putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 716
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 77/155 (49%), Gaps = 10/155 (6%)
Query: 249 QTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN----- 303
Q NR+ P+ +++F++KS + +++ S++ VWA+ + KL+ A+ A+
Sbjct: 460 QFNRDDFPVQYDDAKFFVIKSYSEDDIHKSIKYNVWASTTNGNKKLDAAYQEAQAKSSKC 519
Query: 304 -VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHK 362
+ L FSVN + F G A+MT + W+ + + S+KW + ++ +
Sbjct: 520 PIFLFFSVNTSGQFVGVAEMTGAVDFEKTLEYWQ----QDKWNGSLSLKWHIVKDVPNNI 575
Query: 363 TRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+H+ NEN PV SRD QE+ G Q+ +
Sbjct: 576 LKHIILENNENKPVTNSRDTQEVNLDQGIQMLKIF 610
>gi|346975012|gb|EGY18464.1| hypothetical protein VDAG_08798 [Verticillium dahliae VdLs.17]
Length = 448
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
++FI+KS E+L+LSV+ G+WATQ NE LN AF + +NV L+FS N++ + G AKM
Sbjct: 193 KFFILKSLTVEDLDLSVRTGIWATQSHNEDTLNNAFKAVDNVYLVFSANKSGEYFGYAKM 252
Query: 323 TSKI 326
S I
Sbjct: 253 VSPI 256
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL L F++TR LRNP+N N VKI+RD ELEPS+G +L L
Sbjct: 340 WGKPFRLEWLSTTRLPFYRTRGLRNPWNSNREVKIARDGTELEPSVGRKLIGLF 393
>gi|345306804|ref|XP_001513021.2| PREDICTED: YTH domain family protein 3-like [Ornithorhynchus
anatinus]
Length = 606
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 438 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 497
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 498 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWVFVKDVPNNQLRHIRLENNDNKPVTNS 553
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 554 RDTQEVPLEKAKQVLKII 571
>gi|367043470|ref|XP_003652115.1| hypothetical protein THITE_2113192 [Thielavia terrestris NRRL 8126]
gi|346999377|gb|AEO65779.1| hypothetical protein THITE_2113192 [Thielavia terrestris NRRL 8126]
Length = 576
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FI+KS E+LELSV+ WATQ NE +LN AF +++NV L+FS N++ + G A+M
Sbjct: 335 RFFILKSLTVEDLELSVRNNTWATQAHNEERLNSAFKTSDNVYLVFSANKSGEYFGYARM 394
Query: 323 TSKI 326
S I
Sbjct: 395 ASAI 398
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+G+ F ++WL L FH+TR +RNP+N N VKI+RD ELEPS+G +L L
Sbjct: 492 WGKPFRLEWLSTTRLPFHRTRGMRNPWNSNREVKIARDGTELEPSVGRRLIGLF 545
>gi|169603423|ref|XP_001795133.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
gi|111067361|gb|EAT88481.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
Length = 232
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 70 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNED 128
R + + VC+HWLR LC KG+ C FLH+Y+ RMP C ++ C DC+Y H + +
Sbjct: 45 RPACKFLVCKHWLRGLCKKGETCEFLHEYNLRRMPECSYYARTQTCSNGDDCLYLHIDPE 104
Query: 129 IKE--CNMYKLGFCPNGPDCRYRHVK 152
K C Y GFCP GP C +H K
Sbjct: 105 AKRPSCPHYDRGFCPLGPYCALKHNK 130
>gi|326522394|dbj|BAK07659.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 240 QNLPNG------LPNQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAK 293
Q LP G + +Q N+ +++FI+KS + +++ S++ VWA+ S +
Sbjct: 355 QELPTGDASNAVVQDQYNKADFVETYSDAKFFIIKSYSEDDVHKSIKYNVWASTPSGNKR 414
Query: 294 LNEAFDSAEN------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRN 347
L+ A+ +A++ + L+FSVN + F G A+M ++ + W+ T
Sbjct: 415 LDAAYQAAKDKSSNSPIFLLFSVNTSGQFIGLAEMVGQVDFNKTVEYWQQDKWTGC---- 470
Query: 348 FSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
F VKW + ++ +H+ YNEN PV SRD QE+ G Q+ +
Sbjct: 471 FPVKWHIVKDIPNTLLKHIILEYNENKPVTNSRDTQEVRLEQGLQVLKIF 520
>gi|315051880|ref|XP_003175314.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS
118893]
gi|311340629|gb|EFQ99831.1| mRNA 3'-end-processing protein yth1 [Arthroderma gypseum CBS
118893]
Length = 251
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIK--ECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H + D K +C
Sbjct: 88 VCKHYLKGLCKKGLKCEYLHEYNLRRMPECQSFSRNGFCPNGDDCLYQHLSGDAKLPQCE 147
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 148 HYDQGFCPLGPICAKRHVR 166
>gi|320586168|gb|EFW98847.1| yt521-b-like splicing factor [Grosmannia clavigera kw1407]
Length = 521
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FI+KS E+LE S++ G+WATQ NE LN AF + +NV LIFS N++ + G A+M
Sbjct: 281 RFFILKSLTVEDLESSMRTGIWATQSHNEETLNSAFKNCDNVYLIFSANKSGEYFGYARM 340
Query: 323 TSKI 326
TS+I
Sbjct: 341 TSEI 344
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALLY 398
+G+ F ++WL + F++TR +RNP N N +KI+RD E++P++G++L L +
Sbjct: 443 WGKPFQLEWLSTLRVPFYRTRGMRNPLNANRDIKIARDGTEVDPTVGQRLIGLFH 497
>gi|353237405|emb|CCA69379.1| hypothetical protein PIIN_03279 [Piriformospora indica DSM 11827]
Length = 778
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQG 318
+RYF++KS +++ S++ +W++ +L++AF + L FSVN + HF G
Sbjct: 486 ARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKECAGRGPIYLFFSVNASGHFCG 545
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPVK 377
A+M + + + W + + F V+W+ + ++ R++R N E PV
Sbjct: 546 MAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNAVLRNIRLNNTQERKPVT 601
Query: 378 ISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G ++ + + P
Sbjct: 602 NSRDTQELLPEAGHEMLRIFFTHP 625
>gi|261196458|ref|XP_002624632.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis SLH14081]
gi|239595877|gb|EEQ78458.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis SLH14081]
gi|239609451|gb|EEQ86438.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Ajellomyces dermatitidis ER-3]
gi|327356997|gb|EGE85854.1| mRNA 3'-end-processing protein yth1 [Ajellomyces dermatitidis ATCC
18188]
Length = 251
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 57/109 (52%), Gaps = 9/109 (8%)
Query: 47 HAAPSSSGAAPDHASAPVPHHSGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVC 106
H PS +A A AP H VC+H+L+ LC KG C +LH+Y+ RMP C
Sbjct: 64 HPTPSRLSSATSPAIAPSSTHG------TLVCKHFLKGLCKKGIKCEYLHEYNLRRMPEC 117
Query: 107 RFFRLFGECREQD-CVYKHTNED--IKECNMYKLGFCPNGPDCRYRHVK 152
+ F G C D C+Y+H ED I C Y+ GFC GP C +HV+
Sbjct: 118 QNFARTGYCPNGDECLYQHVPEDAKIPPCEHYERGFCHLGPLCAKKHVR 166
>gi|393216738|gb|EJD02228.1| YTH-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 786
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 261 ISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQ 317
+R+F++KS +++ S++ +W++ +L++AF + L FSVN + HF
Sbjct: 542 FARFFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAGRGPIYLFFSVNASGHFC 601
Query: 318 GCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLR-NPYNENLPV 376
G A+M + + + W + + F V+W+ + ++ RH++ N E PV
Sbjct: 602 GMAEMMTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNANLRHIKLNNTQERKPV 657
Query: 377 KISRDCQELEPSIGEQLAALLYLEP 401
SRD QEL P G+++ + + P
Sbjct: 658 TNSRDTQELLPDAGQEMLRIFFTHP 682
>gi|441647056|ref|XP_003268398.2| PREDICTED: LOW QUALITY PROTEIN: YTH domain family protein 3
[Nomascus leucogenys]
Length = 534
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S+ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIXYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKAKQVLKII 499
>gi|254585017|ref|XP_002498076.1| ZYRO0G01672p [Zygosaccharomyces rouxii]
gi|238940970|emb|CAR29143.1| ZYRO0G01672p [Zygosaccharomyces rouxii]
Length = 329
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 76/146 (52%), Gaps = 14/146 (9%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSA---ENVILIFSVNRTRHFQG 318
SR+F++KS + E+++ S G+W++ +L+EA++S + L+FSVN + F G
Sbjct: 178 SRFFVIKSSSLEHVKKSFYNGIWSSTFYGNKRLSEAYESLPQGAKIYLLFSVNASGRFCG 237
Query: 319 CAKMTSK----IGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
A+M+S + S+ G N +Y H F V+W+ + ++ + P N+
Sbjct: 238 VAEMSSNLREDLDTSIWGDNSRYRHA-------FKVRWIVVRDVHNRSLKQFLIPANDMK 290
Query: 375 PVKISRDCQELEPSIGEQLAALLYLE 400
PV SRD QE+ +I + + L E
Sbjct: 291 PVTNSRDTQEIPATISKSILKLFKYE 316
>gi|209867680|gb|ACI90367.1| YTH domain family member 1-like protein [Philodina roseola]
Length = 464
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTR 314
P+G +R+F++KS + +++ S++ +W + +L+ AF E + L +SVN +
Sbjct: 292 PKG-ARFFVIKSYSEDDVHRSIKYNIWCSTEHGNKRLDAAFREREGKGPIYLFYSVNASG 350
Query: 315 HFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENL 374
HF G A+M S + W+ ++ + F VKW+ + ++ + RH+R NEN
Sbjct: 351 HFCGMAEMMSPVNYDEQTDIWQMSNK---WQGKFEVKWIYVKDVPNQQFRHIRLENNENK 407
Query: 375 PVKISRDCQELEPSIGEQLAALLYL 399
PV SRD QE+ G+ + L++
Sbjct: 408 PVTNSRDTQEIPYEKGKLMLKTLHM 432
>gi|30962830|gb|AAH52631.1| Ythdf3 protein, partial [Mus musculus]
Length = 473
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 305 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 364
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 365 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 420
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 421 RDTQEVPLEKAKQVLKII 438
>gi|225443468|ref|XP_002273579.1| PREDICTED: uncharacterized protein LOC100249606 [Vitis vinifera]
Length = 668
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+++FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ V L+FSVN +
Sbjct: 423 AKFFIIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYREAKEKQAACPVFLLFSVNASAQ 482
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ + F VKW + ++ + RH+ N+N P
Sbjct: 483 FCGVAEMVGPVDFDKSVDYWQ----QDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKP 538
Query: 376 VKISRDCQELEPSIG-EQLAALLYLEPDSELM 406
V SRD QE++ G E L E D+ ++
Sbjct: 539 VTNSRDTQEVKLEQGIEILNIFKNYETDTSIL 570
>gi|297735685|emb|CBI18372.3| unnamed protein product [Vitis vinifera]
Length = 666
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 11/152 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+++FI+KS + +N+ S++ GVWA+ + KL+ A+ A+ V L+FSVN +
Sbjct: 421 AKFFIIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYREAKEKQAACPVFLLFSVNASAQ 480
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ + F VKW + ++ + RH+ N+N P
Sbjct: 481 FCGVAEMVGPVDFDKSVDYWQ----QDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKP 536
Query: 376 VKISRDCQELEPSIG-EQLAALLYLEPDSELM 406
V SRD QE++ G E L E D+ ++
Sbjct: 537 VTNSRDTQEVKLEQGIEILNIFKNYETDTSIL 568
>gi|224095105|ref|XP_002310346.1| predicted protein [Populus trichocarpa]
gi|222853249|gb|EEE90796.1| predicted protein [Populus trichocarpa]
Length = 643
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 11/152 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+++FI+KS + +N+ S++ GVWA+ + KL+ + A+ V L+FSVN +
Sbjct: 397 AKFFIIKSYSEDNVHKSIKYGVWASTPNGNRKLDTTYREAKEKQDPCPVFLLFSVNASAQ 456
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+MT + W+ + F VKW + ++ + RH+ N+N P
Sbjct: 457 FCGVAEMTGPVDFDKSVDYWQ----QDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKP 512
Query: 376 VKISRDCQELEPSIG-EQLAALLYLEPDSELM 406
V SRD QE++ G E L E D ++
Sbjct: 513 VTNSRDTQEVKLEQGIEMLNIFKNYETDMSII 544
>gi|148226902|ref|NP_001087631.1| YTH domain family, member 3 [Xenopus laevis]
gi|51704025|gb|AAH81017.1| MGC81605 protein [Xenopus laevis]
Length = 572
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 7/140 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 404 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 463
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW + ++ ++ RH+R N+N PV S
Sbjct: 464 AEMKSVVDYNAYAGVWS----QDKWKGKFDVKWAFVKDVPNNQLRHIRLENNDNKPVTNS 519
Query: 380 RDCQELEPSIGEQLAALLYL 399
RD QE+ +Q+ ++ +
Sbjct: 520 RDTQEVPLEKAKQVLKIIAM 539
>gi|21751834|dbj|BAC04046.1| unnamed protein product [Homo sapiens]
Length = 534
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 366 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 425
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 426 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 481
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 482 RDTQEVPLEKVKQVLKII 499
>gi|297746505|emb|CBI16561.3| unnamed protein product [Vitis vinifera]
Length = 675
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPN--QTNRNATPL 257
G N +N+G KSS + Q Q G+ + ++ + P+ Q N P+
Sbjct: 358 GLNELNRGPRAKSSKNQKGLAPVTAKGQNVQSNGSNDEE-KDRTSVFPDRDQYNHADFPV 416
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVN 311
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN
Sbjct: 417 EHTEAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYREAQEKSAGCPVFLFFSVN 476
Query: 312 RTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN 371
+ F G A+M + W+ + FSVKW + ++ +H+ N
Sbjct: 477 TSGQFVGLAEMVGHVDFHKNVEYWQ----QDKWNGCFSVKWHVVKDVPNSLLKHITLENN 532
Query: 372 ENLPVKISRDCQELEPSIGEQLAALL 397
EN PV SRD QE++ G Q+ +
Sbjct: 533 ENKPVTNSRDTQEVKLEQGLQMLKIF 558
>gi|389748621|gb|EIM89798.1| YTH-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 786
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 248 NQTNRNATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---V 304
N TN + P+ +RYF++KS +++ S++ +W++ +L++AF +
Sbjct: 500 NPTNFDIRPVN---ARYFVIKSYTEDDVHKSLKYEIWSSTDPGNKRLDKAFKETAARGPI 556
Query: 305 ILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTR 364
L FSVN + HF G A+M + + + W + + F V+W+ + ++ R
Sbjct: 557 YLFFSVNASGHFCGMAEMLTPVDYTRSSTVW----ASDKWKGVFKVRWIFVRDIPNANLR 612
Query: 365 HLR-NPYNENLPVKISRDCQELEPSIGEQLAALLYLEP 401
H+R N E PV SRD QEL G+++ + + P
Sbjct: 613 HIRLNNTQERKPVTNSRDTQELMADAGQEMLRIFHSHP 650
>gi|119482544|ref|XP_001261300.1| YT521-B-like splicing factor, putative [Neosartorya fischeri NRRL
181]
gi|119409455|gb|EAW19403.1| YT521-B-like splicing factor, putative [Neosartorya fischeri NRRL
181]
Length = 425
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAK 321
+RYFIVKS +LELS Q G+WATQ NE LN A++SA NV LIFS N++ + G A+
Sbjct: 169 NRYFIVKSLTVGDLELSRQSGIWATQSHNEDNLNRAYESACNVYLIFSANKSGEYYGYAR 228
Query: 322 MTSKI 326
M S I
Sbjct: 229 MMSPI 233
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 38/58 (65%)
Query: 340 GTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
G GR F V+WL + FH+TR LRNP+N N VKI+RD E+EPS+GE+L L
Sbjct: 350 GFQSIGRPFRVQWLSTERVPFHRTRGLRNPWNANREVKIARDGTEIEPSVGERLIRLF 407
>gi|225435800|ref|XP_002285750.1| PREDICTED: uncharacterized protein LOC100253534 [Vitis vinifera]
Length = 705
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 13/206 (6%)
Query: 200 GPNAVNQGAAGKSSTAESANVHQQQLVQQPQQQGTQTTQMQNLPNGLPN--QTNRNATPL 257
G N +N+G KSS + Q Q G+ + ++ + P+ Q N P+
Sbjct: 388 GLNELNRGPRAKSSKNQKGLAPVTAKGQNVQSNGSNDEE-KDRTSVFPDRDQYNHADFPV 446
Query: 258 PQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVN 311
+++FI+KS + +++ S++ VWA+ + KL+ A+ A+ V L FSVN
Sbjct: 447 EHTEAKFFIIKSYSEDDVHKSIKYNVWASTPNGNKKLDAAYREAQEKSAGCPVFLFFSVN 506
Query: 312 RTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYN 371
+ F G A+M + W+ + FSVKW + ++ +H+ N
Sbjct: 507 TSGQFVGLAEMVGHVDFHKNVEYWQ----QDKWNGCFSVKWHVVKDVPNSLLKHITLENN 562
Query: 372 ENLPVKISRDCQELEPSIGEQLAALL 397
EN PV SRD QE++ G Q+ +
Sbjct: 563 ENKPVTNSRDTQEVKLEQGLQMLKIF 588
>gi|115387235|ref|XP_001211123.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195207|gb|EAU36907.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 259
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNED--IKECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H E + C
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 151 HYDRGFCPLGPLCAKRHVR 169
>gi|349604959|gb|AEQ00359.1| YTH domain family protein 3-like protein, partial [Equus caballus]
Length = 442
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 274 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 333
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 334 AEMKSVVDYNAYAGVW----SQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 389
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 390 RDTQEVPLEKAKQVLKII 407
>gi|70948866|ref|XP_743896.1| rat BRAIN protein-like [Plasmodium chabaudi chabaudi]
gi|56523613|emb|CAH87867.1| rat BRAIN protein-like, putative [Plasmodium chabaudi chabaudi]
Length = 223
Score = 73.6 bits (179), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 52/88 (59%)
Query: 304 VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKT 363
VIL+FSVN + F G A M SK G S + Y G+NF ++W+++ ++ FH+
Sbjct: 11 VILVFSVNESSKFCGYAIMRSKPGESKNNNVYFYYDDKIFRGKNFDIQWIRIVDVFFHEV 70
Query: 364 RHLRNPYNENLPVKISRDCQELEPSIGE 391
HL+N N+N +K+ RD QE+E GE
Sbjct: 71 THLKNSLNDNKLIKVGRDGQEIEQMAGE 98
>gi|190404691|gb|EDV07958.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 306
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|323355538|gb|EGA87359.1| YDR374C-like protein [Saccharomyces cerevisiae VL3]
gi|349577423|dbj|GAA22592.1| K7_Ydr374cp [Saccharomyces cerevisiae Kyokai no. 7]
Length = 306
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|225680808|gb|EEH19092.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 599
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFIVKS E+LE S GVWATQR NE+ LN A++++E V LIFS N++ + G +M
Sbjct: 397 RYFIVKSLTIEDLERSRISGVWATQRHNESALNRAYETSEVVYLIFSANKSGEYFGYGRM 456
Query: 323 TSKI 326
TS I
Sbjct: 457 TSPI 460
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+GR F+V+WL L FH+T+ LRNP+N N VKI+RD E+EPS+G +L L
Sbjct: 542 FGRPFNVEWLCWRRLPFHRTKGLRNPWNANKEVKIARDGTEIEPSVGRRLINLF 595
>gi|398366537|ref|NP_010662.3| hypothetical protein YDR374C [Saccharomyces cerevisiae S288c]
gi|74583560|sp|Q06390.1|YD374_YEAST RecName: Full=YTH domain-containing protein YDR374C
gi|849195|gb|AAB64810.1| Ydr374cp [Saccharomyces cerevisiae]
gi|151942346|gb|EDN60702.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|285811391|tpg|DAA12215.1| TPA: hypothetical protein YDR374C [Saccharomyces cerevisiae S288c]
gi|392300491|gb|EIW11582.1| hypothetical protein CENPK1137D_4200 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 306
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|52626690|emb|CAH56480.1| hypothetical protein [Homo sapiens]
Length = 585
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 417 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 476
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV
Sbjct: 477 AEMKSVVDYNAYAGVWS----QDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNP 532
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 533 RDTQEVPLEKAKQVLKII 550
>gi|291238825|ref|XP_002739326.1| PREDICTED: Smad-interacting and CPSF-like protein-like
[Saccoglossus kowalevskii]
Length = 858
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECREQDCVYKHTNEDIKE--CNM 134
VC +LR C G +C F H+ K +MPVC FF L G C DC Y H N K C
Sbjct: 655 VCTRFLRGTCKDGASCQFSHKVSKDKMPVCSFF-LRGVCNRDDCPYLHVNVSRKAAVCQD 713
Query: 135 YKLGFCPNGPDCRYRHV 151
+ G+CP G C+ RH+
Sbjct: 714 FLKGYCPQGQKCKERHI 730
>gi|207346387|gb|EDZ72898.1| YDR374Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259145611|emb|CAY78875.1| EC1118_1D0_6711p [Saccharomyces cerevisiae EC1118]
gi|323305458|gb|EGA59202.1| YDR374C-like protein [Saccharomyces cerevisiae FostersB]
Length = 306
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|255568928|ref|XP_002525434.1| yth domain-containing protein, putative [Ricinus communis]
gi|223535247|gb|EEF36924.1| yth domain-containing protein, putative [Ricinus communis]
Length = 677
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 234 TQTTQMQNLP----------NGLPNQTNRNATPLPQGIS--RYFIVKSCNRENLELSVQQ 281
+Q Q QNLP + +P+ N P+ S ++F++KS + +++ S++
Sbjct: 385 SQAVQGQNLPLSDNTKEDNSSQVPDNEQYNREDFPEDYSNAKFFVIKSYSEDDVHKSIKY 444
Query: 282 GVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRHFQGCAKMTSKIGGSVGGGNW 335
GVWA+ + KL+ A+ A+ + L+FSVN + F G A+M + + W
Sbjct: 445 GVWASTANGNKKLDAAYHEAKETSGGCPIFLLFSVNTSGQFVGLAEMVGPVDFNKTVEYW 504
Query: 336 KYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAA 395
+ + F VKW + ++ + RH+ NEN PV SRD QE+ G Q+
Sbjct: 505 Q----QEKWIGCFPVKWHIIKDVPNNSLRHVTLENNENKPVTNSRDTQEVIFEKGIQMLK 560
Query: 396 LL 397
+
Sbjct: 561 IF 562
>gi|169766720|ref|XP_001817831.1| mRNA 3'-end-processing protein yth1 [Aspergillus oryzae RIB40]
gi|238483485|ref|XP_002372981.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus flavus NRRL3357]
gi|110283026|sp|Q2URI6.1|YTH1_ASPOR RecName: Full=mRNA 3'-end-processing protein yth1
gi|83765686|dbj|BAE55829.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701031|gb|EED57369.1| mRNA cleavage and polyadenylation specificity factor complex
subunit [Aspergillus flavus NRRL3357]
Length = 255
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIKE--CN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H E + C
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 151 HYDRGFCPLGPLCAKRHVR 169
>gi|391870897|gb|EIT80066.1| polyadenylation factor I complex, subunit, Yth1 [Aspergillus oryzae
3.042]
Length = 255
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNEDIKE--CN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H E + C
Sbjct: 91 VCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 151 HYDRGFCPLGPLCAKRHVR 169
>gi|323309679|gb|EGA62887.1| YDR374C-like protein [Saccharomyces cerevisiae FostersO]
Length = 306
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|67516033|ref|XP_657902.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|74599076|sp|Q5BGN2.1|YTH1_EMENI RecName: Full=mRNA 3'-end-processing protein yth1
gi|40746548|gb|EAA65704.1| hypothetical protein AN0298.2 [Aspergillus nidulans FGSC A4]
gi|259489475|tpe|CBF89777.1| TPA: mRNA 3'-end-processing protein yth1
[Source:UniProtKB/Swiss-Prot;Acc:Q5BGN2] [Aspergillus
nidulans FGSC A4]
Length = 254
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 77 VCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLFGECRE-QDCVYKHTNED--IKECN 133
VC+H+L+ LC KG C +LH+Y+ RMP C+ F G C DC+Y+H E + C
Sbjct: 91 VCKHFLKGLCKKGMKCEYLHEYNLRRMPECQSFSRSGYCPNGDDCLYQHVREQARLPPCE 150
Query: 134 MYKLGFCPNGPDCRYRHVK 152
Y GFCP GP C RHV+
Sbjct: 151 HYDQGFCPLGPLCAKRHVR 169
>gi|392591903|gb|EIW81230.1| hypothetical protein CONPUDRAFT_82255 [Coniophora puteana
RWD-64-598 SS2]
Length = 882
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
R+FI+KS + +L++SV++G+WATQ+ NEA L++A+ ++ +V LIF VN++ F G AKM
Sbjct: 532 RFFILKSLTQYDLDVSVERGLWATQKHNEAILDQAYRTSRDVYLIFGVNKSGEFYGFAKM 591
Query: 323 TSKI 326
+I
Sbjct: 592 AGRI 595
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 34/46 (73%)
Query: 348 FSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQL 393
F ++WL +L F +T+HLRNP+N +K+SRD ELEP++G+QL
Sbjct: 802 FKIEWLCTDKLPFFRTKHLRNPWNHEREIKVSRDGTELEPTVGQQL 847
>gi|308044491|ref|NP_001183775.1| uncharacterized protein LOC100502368 precursor [Zea mays]
gi|238014462|gb|ACR38266.1| unknown [Zea mays]
gi|414870148|tpg|DAA48705.1| TPA: hypothetical protein ZEAMMB73_063582 [Zea mays]
Length = 450
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 80/166 (48%), Gaps = 12/166 (7%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN------VILIFSVNRTRH 315
+R+FI+KS + +N+ SV+ GVWA+ + KL+ A+ A+ + L+FSVN +
Sbjct: 213 ARFFIIKSYSEDNVHKSVKYGVWASTTNGNKKLDSAYREAKEKGEHCPIFLLFSVNASAQ 272
Query: 316 FQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLP 375
F G A+M + W+ T F VKW + ++ + RH+ N+N P
Sbjct: 273 FCGVAEMIGPVDFEKSVDYWQQDKWTGQ----FPVKWHIVKDVPNNLFRHIILENNDNKP 328
Query: 376 VKISRDCQELEPSIGEQLAALLYLEPDSELMAISVAAEAKREEEKA 421
V SRD QE++ G ++ + D +I E E EKA
Sbjct: 329 VTNSRDTQEVKLEQGMEMLKIFKNHDDDA--SILDDFEFYEEREKA 372
>gi|401624169|gb|EJS42237.1| YDR374C [Saccharomyces arboricola H-6]
Length = 306
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
S++F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SKFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYRTLNSGSKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLRMDLDTSIWE---DEQKYGKAFKVRWVIVRDVNNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ +IG + L + DS++ +
Sbjct: 272 SRDTQEIPYAIGISIVNLFKTQ-DSDVFSF 300
>gi|323349125|gb|EGA83356.1| YDR374C-like protein [Saccharomyces cerevisiae Lalvin QA23]
Length = 306
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|256273060|gb|EEU08018.1| YDR374C-like protein [Saccharomyces cerevisiae JAY291]
Length = 306
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 79/150 (52%), Gaps = 7/150 (4%)
Query: 262 SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF---DSAENVILIFSVNRTRHFQG 318
SR+F++KS + ++++ S G+W++ +L+EA+ +S V L FS+N + F G
Sbjct: 155 SRFFVIKSSSLKHVKRSFYNGIWSSTHFGNKRLSEAYKKLNSGAKVFLFFSINTSGRFCG 214
Query: 319 CAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKI 378
A+M S + + W+ YG+ F V+W+ + +++ + P NE P+
Sbjct: 215 VAEMVSDLKMDLDTSIWE---DEQKYGKAFKVRWVIVRDINNRSLKRFLIPSNEMKPITH 271
Query: 379 SRDCQELEPSIGEQLAALLYLEPDSELMAI 408
SRD QE+ SIG + L+ DS++ +
Sbjct: 272 SRDTQEIPYSIGISIIN-LFKTQDSDIFSF 300
>gi|226292504|gb|EEH47924.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 559
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/64 (54%), Positives = 45/64 (70%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRHFQGCAKM 322
RYFIVKS E+LE S GVWATQR NE+ LN A++++E V LIFS N++ + G +M
Sbjct: 357 RYFIVKSLTIEDLERSRISGVWATQRHNESALNRAYETSEVVYLIFSANKSGEYFGYGRM 416
Query: 323 TSKI 326
TS I
Sbjct: 417 TSPI 420
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 344 YGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLAALL 397
+GR F+V+WL L FH+T+ LRNP+N N VKI+RD E+EPS+G +L L
Sbjct: 502 FGRPFNVEWLCWRRLPFHRTKGLRNPWNANKEVKIARDGTEIEPSVGRRLINLF 555
>gi|332826181|ref|XP_003311785.1| PREDICTED: YTH domain family protein 3 [Pan troglodytes]
Length = 395
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 263 RYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAEN---VILIFSVNRTRHFQGC 319
R FI+KS + +++ S++ +W + +L+ A+ S + L+FSVN + HF G
Sbjct: 227 RVFIIKSYSEDDIHRSIKYSIWCSTEHGNKRLDAAYRSLNGKGPLYLLFSVNGSGHFCGV 286
Query: 320 AKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKIS 379
A+M S + + G W + F VKW+ + ++ ++ RH+R N+N PV S
Sbjct: 287 AEMKSVVDYNAYAGVW----SQDKWKGKFEVKWIFVKDVPNNQLRHIRLENNDNKPVTNS 342
Query: 380 RDCQELEPSIGEQLAALL 397
RD QE+ +Q+ ++
Sbjct: 343 RDTQEVPLEKAKQVLKII 360
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,088,514,793
Number of Sequences: 23463169
Number of extensions: 669797698
Number of successful extensions: 3979828
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1394
Number of HSP's successfully gapped in prelim test: 14151
Number of HSP's that attempted gapping in prelim test: 3826507
Number of HSP's gapped (non-prelim): 117076
length of query: 701
length of database: 8,064,228,071
effective HSP length: 150
effective length of query: 551
effective length of database: 8,839,720,017
effective search space: 4870685729367
effective search space used: 4870685729367
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 81 (35.8 bits)