Your job contains 1 sequence.
>005342
MHGSKMCIDKDTYTHLITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEK
AEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRID
CELAELLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALS
SLIKLICPSFEKETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEW
DNAEKYLSAFTNMNDNTYSAKMFSQIQRQKYLEAVDRQQKLPSDFAERAHLFDDFKVLVE
RNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCINVMPNANNETISLKDFPTVSNLRYA
SSILTDKPNQEGRPLDASSGDDSNDSSCFNDNNQSRESTSLPDADSAVCAKSLEKSVNLK
LQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSNKQSLEEE
NVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIFSLETFQTLAT
FANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNV
LVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQI
DVYEAPTLNHTSQVLLISHIMFVQIVVKFHSFKFFYVAVGA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 005342
(701 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2040100 - symbol:AT2G25420 "AT2G25420" species... 673 1.3e-130 2
TAIR|locus:2198888 - symbol:TPR1 "TOPLESS-related 1" spec... 602 2.3e-99 2
TAIR|locus:2036204 - symbol:TPL "TOPLESS" species:3702 "A... 597 4.2e-99 2
TAIR|locus:2086770 - symbol:TPR2 "TOPLESS-related 2" spec... 499 1.4e-86 3
TAIR|locus:2159562 - symbol:AT5G08560 "AT5G08560" species... 116 8.8e-07 2
WB|WBGene00004895 - symbol:smu-1 species:6239 "Caenorhabd... 93 1.4e-05 3
GENEDB_PFALCIPARUM|PFC0365w - symbol:PFC0365w "conserved ... 139 1.7e-05 2
UNIPROTKB|O77325 - symbol:PFC0365w "PRP19-like protein, p... 139 1.7e-05 2
POMBASE|SPAC343.04c - symbol:SPAC343.04c "WD repeat prote... 116 5.7e-05 3
ASPGD|ASPL0000006214 - symbol:AN6385 species:162425 "Emer... 128 8.0e-05 1
DICTYBASE|DDB_G0278353 - symbol:smu1 "suppressor of mec-8... 82 0.00015 3
ZFIN|ZDB-GENE-041014-277 - symbol:wdr26b "WD repeat domai... 110 0.00051 2
>TAIR|locus:2040100 [details] [associations]
symbol:AT2G25420 "AT2G25420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=RCA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010050 "vegetative phase change" evidence=RCA] [GO:0010073
"meristem maintenance" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 KO:K14558
EMBL:AK226678 IPI:IPI00517803 RefSeq:NP_565594.3 UniGene:At.23385
ProteinModelPortal:Q0WVR3 SMR:Q0WVR3 STRING:Q0WVR3 PRIDE:Q0WVR3
EnsemblPlants:AT2G25420.1 GeneID:817080 KEGG:ath:AT2G25420
TAIR:At2g25420 eggNOG:NOG240498 HOGENOM:HOG000120706
InParanoid:Q0WVR3 OMA:STEWEVA PhylomeDB:Q0WVR3
ProtClustDB:CLSN2920575 Genevestigator:Q0WVR3 Uniprot:Q0WVR3
Length = 740
Score = 673 (242.0 bits), Expect = 1.3e-130, Sum P(2) = 1.3e-130
Identities = 153/359 (42%), Positives = 220/359 (61%)
Query: 6 MCIDKDTYTHLITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYL 65
M +D+ +L+ LI++F +EE ++ESL LEQ+S +FF+ ++NG W+ A+ YL
Sbjct: 1 MILDEKNRKNLVFLILQFFDEEGYEESLHLLEQDSGVFFDFSYLSNAILNGNWKDADDYL 60
Query: 66 SAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAE 125
SAFT + + S+KMFF L K K+ EA R +EA IF KDL+ V ++ +L E
Sbjct: 61 SAFTSPEANTFSRKMFFGLFKLKFSEAPDRSGGSEAVKIFSKDLRRIPVLKDDSFDDLVE 120
Query: 126 LLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLIKL 185
++A+ D+R E+ A RAKL L L + N L+ KL FP +N SAL +LI L
Sbjct: 121 VIAVDDMRIPEETCCVDKAPG-RAKLCVDLHKLAESNPSLRGKLDFPSLNKSALLALISL 179
Query: 186 ICPSFEKET---KEELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDN 242
+CP+ + KE+LI LI QFL E ++K TLHKLEQET+VFF++NY E + GE+
Sbjct: 180 LCPNCSRRKGGLKEDLICLILQFLYEAKYKNTLHKLEQETKVFFNLNYLAEVMKLGEYGK 239
Query: 243 AEKYLSAFTNMNDNTYSAKMFSQIQRQKYLEAVDRQQKLPS----DFAERAHLFDDFKVL 298
AE+YL AFTN DN YS MF ++Q+ L++ + + PS + + + L +L
Sbjct: 240 AEEYLGAFTNWEDNKYSKAMFLELQKLICLQSTEWEVATPSGSLDNMSLKIKLHASVAML 299
Query: 299 VERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCINVMPNANNETISLKDFPTVSNL 357
++NP+L+D+LKFPSM+KSRLL+L+KQ MDWW C N T SL++ P VS L
Sbjct: 300 AKKNPVLKDELKFPSMEKSRLLTLVKQTMDWWT--C--------NNTSSLENVPVVSYL 348
Score = 629 (226.5 bits), Expect = 1.3e-130, Sum P(2) = 1.3e-130
Identities = 119/248 (47%), Positives = 165/248 (66%)
Query: 424 INEPSECRTLLLPDNSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVN 483
I +PS+C L+LPD ++ RL YS SGD+++AL + ATHKLW W S++ +ENV
Sbjct: 372 IKDPSQCNALVLPDCFSEEKIARLTYSPSGDYILALAEDATHKLWTWSSSQNEFCKENVY 431
Query: 484 MESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFAN 543
+ +L+QP S M N++A + S SCFA++GS+LFS SGGKI++F L+ F+ +A+F +
Sbjct: 432 PKPRLHQPQSGKTMENEMATSVQKSTSCFAVKGSYLFSTSGGKIAVFDLKNFEKVASFGS 491
Query: 544 PPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVS 603
P P+ATYFI +P DL A G DD SI +HC ++K K KL+GH +ITCLA+S NVLVS
Sbjct: 492 PTPMATYFIFIPGDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVS 551
Query: 604 SGADAQLCVWDAVGWKKLCSK-FLHSF-QTGLVPETTIVNHIQFHPDQIHLLSIHEGQID 661
S +D +LC+W W KL SK F + T++V HIQF P QI LL +H+G I
Sbjct: 552 SDSDGKLCLWSTKSWVKLTSKNSTRKFCNRSNLESTSLVTHIQFDPYQIELLVVHDGWIG 611
Query: 662 VYEAPTLN 669
+YE TL+
Sbjct: 612 LYEVRTLD 619
>TAIR|locus:2198888 [details] [associations]
symbol:TPR1 "TOPLESS-related 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005829
"cytosol" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AC018849 EMBL:AC034256 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AK226879 IPI:IPI00542045 IPI:IPI00852338 PIR:G96836
RefSeq:NP_178164.3 RefSeq:NP_849913.2 UniGene:At.25188
ProteinModelPortal:Q0WV90 SMR:Q0WV90 DIP:DIP-59361N STRING:Q0WV90
PaxDb:Q0WV90 PRIDE:Q0WV90 EnsemblPlants:AT1G80490.2 GeneID:844388
KEGG:ath:AT1G80490 GeneFarm:3123 TAIR:At1g80490 InParanoid:Q0WV90
OMA:FMDATIC PhylomeDB:Q0WV90 Genevestigator:Q0WV90 Uniprot:Q0WV90
Length = 1120
Score = 602 (217.0 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 125/283 (44%), Positives = 181/283 (63%)
Query: 397 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 456
+S ++ D + +S +KS KL + EPS+CR+L LP+N ++ RLI+++SG+ +
Sbjct: 713 DSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENMRVTKISRLIFTNSGNAI 772
Query: 457 VALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCFAL 514
+AL A H LWKWQ N + + + ++ Q +QP+S ++MTND+A +P++++ CFAL
Sbjct: 773 LALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFAL 832
Query: 515 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 570
S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I +
Sbjct: 833 SKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQI 892
Query: 571 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 630
+ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L Q
Sbjct: 893 YNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQIPQ 952
Query: 631 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 673
G + +QFH DQ+H L +HE Q+ +YE L Q
Sbjct: 953 -GRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKLECMKQ 994
Score = 422 (153.6 bits), Expect = 2.3e-99, Sum P(2) = 2.3e-99
Identities = 85/168 (50%), Positives = 117/168 (69%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKE++ LEQES FFN+ F + V NG W++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL RH+R +A I KDLKVFS + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+RA ++ LK L++ N + +DKL FP + S L +LI
Sbjct: 128 EQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLI 175
Score = 273 (101.2 bits), Expect = 1.2e-83, Sum P(2) = 1.2e-83
Identities = 48/84 (57%), Positives = 67/84 (79%)
Query: 197 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 256
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDN 66
Query: 257 TYSAKMFSQIQRQKYLEAVDRQQK 280
YS K+F +I++QKYLEA+DR +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRHDR 90
Score = 140 (54.3 bits), Expect = 1.3e-69, Sum P(2) = 1.3e-69
Identities = 44/163 (26%), Positives = 82/163 (50%)
Query: 223 RVFFDINYFREYITSGEWDNAEKYLSAFTNMND--NTYSAKMFSQIQRQKYLEAVDRQQK 280
++FF+I ++Y+ + + + K + +T++ ++F +I + LE ++
Sbjct: 71 KIFFEIRK-QKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
Query: 281 LPSDFAE----RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCIN 336
L S + + RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W C N
Sbjct: 130 L-SKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQLCKN 188
Query: 337 VMPNANNETISLKDFPTVSNLRYASS-----ILTDKPNQEGRP 374
PN + +T+ + + N A S +L P EG P
Sbjct: 189 PRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFP 231
Score = 50 (22.7 bits), Expect = 1.1e-36, Sum P(2) = 1.1e-36
Identities = 15/81 (18%), Positives = 37/81 (45%)
Query: 589 ITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNH---IQF 645
IT +S ++ +S DA +CV+ + + C ++ + + + H I
Sbjct: 1004 ITHATFSCDSQLIYTSFMDATICVFSSANLRLRCRVNPSAYLPASLSNSNV--HPLVIAA 1061
Query: 646 HPDQIHLLSI--HEGQIDVYE 664
HP + ++ ++ +G + ++E
Sbjct: 1062 HPQESNMFAVGLSDGGVHIFE 1082
Score = 42 (19.8 bits), Expect = 7.8e-36, Sum P(2) = 7.8e-36
Identities = 16/61 (26%), Positives = 25/61 (40%)
Query: 405 DSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFLVALTQTAT 464
D+ +C S S NL+L+ PS L +++ V+ S F V L+
Sbjct: 1022 DATICVFS---SANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHPQESNMFAVGLSDGGV 1078
Query: 465 H 465
H
Sbjct: 1079 H 1079
Score = 37 (18.1 bits), Expect = 2.6e-35, Sum P(2) = 2.6e-35
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 558 LFAFGF--DDSSILVHCPCTK-KTKAKLKG-HQNRITCLAYSLSLNVLVSSGADAQLCVW 613
LF+ G D S +V ++ K +G H+ + + + + N +++G D + W
Sbjct: 565 LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFW 624
Query: 614 D 614
D
Sbjct: 625 D 625
>TAIR|locus:2036204 [details] [associations]
symbol:TPL "TOPLESS" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0010072 "primary shoot apical meristem
specification" evidence=IGI;IMP] [GO:0009733 "response to auxin
stimulus" evidence=IPI] [GO:0010051 "xylem and phloem pattern
formation" evidence=IGI] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634
GO:GO:0045892 GO:GO:0009733 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351
GO:GO:0010072 GO:GO:0010051 EMBL:AC034256 GO:GO:0009867
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668 HSSP:P46680
EMBL:AY046013 EMBL:AY142619 IPI:IPI00520108 PIR:G86291
RefSeq:NP_001031050.1 RefSeq:NP_001031051.1 RefSeq:NP_563981.1
RefSeq:NP_849672.1 UniGene:At.48194 UniGene:At.69991
ProteinModelPortal:Q94AI7 SMR:Q94AI7 DIP:DIP-52391N IntAct:Q94AI7
STRING:Q94AI7 PaxDb:Q94AI7 PRIDE:Q94AI7 ProMEX:Q94AI7
EnsemblPlants:AT1G15750.1 EnsemblPlants:AT1G15750.2
EnsemblPlants:AT1G15750.3 EnsemblPlants:AT1G15750.4 GeneID:838144
KEGG:ath:AT1G15750 GeneFarm:2933 TAIR:At1g15750
HOGENOM:HOG000237725 InParanoid:Q94AI7 OMA:HADRSAN PhylomeDB:Q94AI7
ProtClustDB:CLSN2687817 Genevestigator:Q94AI7 Uniprot:Q94AI7
Length = 1131
Score = 597 (215.2 bits), Expect = 4.2e-99, Sum P(2) = 4.2e-99
Identities = 125/283 (44%), Positives = 181/283 (63%)
Query: 397 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 456
+S ++ D + +S +KS KL ++EPS+CR+L LP+N ++ RLI+++SG+ +
Sbjct: 724 DSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPENLRVAKISRLIFTNSGNAI 783
Query: 457 VALTQTATHKLWKWQSNKQSLE-EENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCFAL 514
+AL A H LWKWQ N+++ + ++ Q +QP+S ++MTND+A +P++++ CFAL
Sbjct: 784 LALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFAL 843
Query: 515 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 570
S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I +
Sbjct: 844 SKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQI 903
Query: 571 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 630
+ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L Q
Sbjct: 904 YNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQRSKVLPLPQ 963
Query: 631 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 673
G +QFH DQ H L +HE Q+ +YE L Q
Sbjct: 964 -GRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKLECMKQ 1005
Score = 425 (154.7 bits), Expect = 4.2e-99, Sum P(2) = 4.2e-99
Identities = 85/168 (50%), Positives = 118/168 (70%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKE++ LEQES FFN+ F + V NG W++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL +H+R +A I KDLKVFS + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+RA ++ LK L++ N + +DKL FP + NS L +LI
Sbjct: 128 EQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLI 175
Score = 270 (100.1 bits), Expect = 9.5e-83, Sum P(2) = 9.5e-83
Identities = 47/84 (55%), Positives = 67/84 (79%)
Query: 197 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 256
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDN 66
Query: 257 TYSAKMFSQIQRQKYLEAVDRQQK 280
YS K+F +I++QKYLEA+D+ +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDKHDR 90
Score = 138 (53.6 bits), Expect = 7.8e-69, Sum P(2) = 7.8e-69
Identities = 36/130 (27%), Positives = 71/130 (54%)
Query: 223 RVFFDINYFREYITSGEWDNAEKYLSAFTNMND--NTYSAKMFSQIQRQKYLEAVDRQQK 280
++FF+I ++Y+ + + + K + +T++ ++F +I + LE ++
Sbjct: 71 KIFFEIRK-QKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFRENEQ 129
Query: 281 LPSDFAE----RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCIN 336
L S + + RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W C N
Sbjct: 130 L-SKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQLCKN 188
Query: 337 VMPNANNETI 346
PN + +T+
Sbjct: 189 PRPNPDIKTL 198
Score = 48 (22.0 bits), Expect = 8.4e-37, Sum P(2) = 8.4e-37
Identities = 19/81 (23%), Positives = 35/81 (43%)
Query: 589 ITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLC----SKFLH-SFQTGLVPETTIVNHI 643
IT +S ++ +S DA +CV+ + + C S +L S V I H
Sbjct: 1015 ITHATFSCDSQLVYASFMDATVCVFSSANLRLRCRVNPSAYLPASLSNSNVHPLVIAAHP 1074
Query: 644 QFHPDQIHLLSIHEGQIDVYE 664
Q P+ + + +G + ++E
Sbjct: 1075 Q-EPNMF-AVGLSDGGVHIFE 1093
Score = 41 (19.5 bits), Expect = 4.6e-36, Sum P(2) = 4.6e-36
Identities = 15/65 (23%), Positives = 29/65 (44%)
Query: 581 KLKGHQNRITCLAYSLSLNVL--VSSGADAQLCVWDAV-GWKKLCSKFLHSFQTGLVPET 637
++ H + +++S L ++ G D + VWDA G K+ H+F+ P
Sbjct: 457 EIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKR------HTFEGHEAPVY 510
Query: 638 TIVNH 642
++ H
Sbjct: 511 SVCPH 515
Score = 38 (18.4 bits), Expect = 2.7e-58, Sum P(2) = 2.7e-58
Identities = 21/78 (26%), Positives = 34/78 (43%)
Query: 138 LSGYTNATSSRAKLIDSLKLLVKENRILQ--DKLIFPCVNNSALSSLIKLICPSFEKETK 195
LSG+T +R + + +++ + L+ DK P A+ L+K +
Sbjct: 57 LSGFTKVDDNRYSM--KIFFEIRKQKYLEALDKHDRP----KAVDILVKDL--KVFSTFN 108
Query: 196 EELIYLIHQFLNEEEFKE 213
EEL I Q L E F+E
Sbjct: 109 EELFKEITQLLTLENFRE 126
Score = 37 (18.1 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 558 LFAFGF--DDSSILVHCPCTK-KTKAKLKG-HQNRITCLAYSLSLNVLVSSGADAQLCVW 613
LF+ G D S +V ++ K +G H+ + + + + N +++G D + W
Sbjct: 565 LFSCGTSKDGESFIVEWNESEGAVKRTYQGFHKRSLGVVQFDTTKNRYLAAGDDFSIKFW 624
Query: 614 D 614
D
Sbjct: 625 D 625
>TAIR|locus:2086770 [details] [associations]
symbol:TPR2 "TOPLESS-related 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0010072 "primary
shoot apical meristem specification" evidence=IGI] [GO:0005515
"protein binding" evidence=IPI] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0010072
EMBL:AB028608 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HSSP:P46680 HOGENOM:HOG000237725 ProtClustDB:CLSN2687817
EMBL:AY074277 IPI:IPI00523281 RefSeq:NP_188306.2 UniGene:At.24033
ProteinModelPortal:Q9LRZ0 SMR:Q9LRZ0 DIP:DIP-58586N STRING:Q9LRZ0
PaxDb:Q9LRZ0 PRIDE:Q9LRZ0 EnsemblPlants:AT3G16830.1 GeneID:820936
KEGG:ath:AT3G16830 GeneFarm:3122 TAIR:At3g16830 InParanoid:Q9LRZ0
OMA:KSARSIM PhylomeDB:Q9LRZ0 Genevestigator:Q9LRZ0 Uniprot:Q9LRZ0
Length = 1131
Score = 499 (180.7 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 107/260 (41%), Positives = 159/260 (61%)
Query: 412 SLEKSVNLKLQLINEPSECRTLLLPDNSFG-GRVVRLIYSHSGDFLVALTQTATHKLWKW 470
S++KS L+L I +P++CR + +PD+ +V RL+Y++SG ++AL +LWKW
Sbjct: 735 SVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKW 794
Query: 471 QSNKQS-LEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFAL--RGSHLFSASGGKI 527
N+Q+ + ++ Q +QP+S L+M ND+ +P+ S+ C AL S++ SA GGK+
Sbjct: 795 IRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGGKV 854
Query: 528 SIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGH 585
S+F++ TF+ + TF PPP +T+ PQD + A G +DSSI ++ + K KLKGH
Sbjct: 855 SLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGH 914
Query: 586 QNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQF 645
Q IT LA+S +LN+LVSSGADAQL W A W+K S + G P +QF
Sbjct: 915 QKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQ-LPPGKAPVGD--TRVQF 971
Query: 646 HPDQIHLLSIHEGQIDVYEA 665
H DQI LL HE Q+ +Y+A
Sbjct: 972 HNDQIQLLVSHETQLAIYDA 991
Score = 410 (149.4 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 82/168 (48%), Positives = 115/168 (68%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKES+ LEQES FFN+ F E + GEW++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL R++R +A I KDLKVF+ + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+R+ + LK L++ N + ++KL FP S L +LI
Sbjct: 128 EQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLI 175
Score = 277 (102.6 bits), Expect = 1.3e-72, Sum P(3) = 1.3e-72
Identities = 50/84 (59%), Positives = 67/84 (79%)
Query: 197 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 256
EL++LI QFL+EE+FKE++HKLEQE+ FF+I YF E +GEWD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDN 66
Query: 257 TYSAKMFSQIQRQKYLEAVDRQQK 280
YS K+F +I++QKYLEA+DR +
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRNDR 90
Score = 141 (54.7 bits), Expect = 2.5e-57, Sum P(2) = 2.5e-57
Identities = 40/141 (28%), Positives = 71/141 (50%)
Query: 223 RVFFDINYFREYITSGEW-DNAE------KYLSAFTNMNDNTYSAKMFSQIQRQKYLEAV 275
++FF+I ++Y+ + + D A+ K L F N+ Y K +Q+ +
Sbjct: 71 KIFFEIRK-QKYLEALDRNDRAKAVEILAKDLKVFATFNEELY--KEITQLLTLENFREN 127
Query: 276 DRQQKLPSDFAERAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYCI 335
++ K + R+ ++ + K L+E NP+ ++KL FPS SRL +LI Q ++W C
Sbjct: 128 EQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCK 187
Query: 336 NVMPNANNETISLKDFPTVSN 356
N PN + +T+ L + SN
Sbjct: 188 NPRPNPDIKTLFLDHSCSPSN 208
Score = 62 (26.9 bits), Expect = 8.6e-38, Sum P(3) = 8.6e-38
Identities = 20/85 (23%), Positives = 39/85 (45%)
Query: 589 ITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIV--NHIQFH 646
IT +YS + ++ +S AD + V+DA + C ++ P + + I H
Sbjct: 1010 ITSASYSCNSQLVYASFADGNIAVFDAESLRLRCRIAPSAYMPQPTPNSAPIFPQVITAH 1069
Query: 647 PDQIHLLSI--HEGQIDVYEAPTLN 669
P + + L++ +G + V E L+
Sbjct: 1070 PQEPNQLAVGLSDGSVKVIEPSELS 1094
Score = 54 (24.1 bits), Expect = 8.6e-38, Sum P(3) = 8.6e-38
Identities = 24/95 (25%), Positives = 47/95 (49%)
Query: 444 VVRLIYSHSGDFL-VALTQTATHKLWKWQSN--KQSLE-EENVNMESQLY--QPSSKLVM 497
V R+ +S G+ L V+ T+ H ++ +Q + +Q LE + +V + L P+ ++ +
Sbjct: 412 VTRVAWSPDGNLLGVSFTKHLIH-VYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCV 470
Query: 498 TNDIAADPKDSISCFALRGSHLFSASGGKISIFSL 532
D K I + L G LF+ G + ++S+
Sbjct: 471 VT--CGDDK-LIKVWDLSGKKLFTFEGHEAPVYSI 502
Score = 40 (19.1 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 601 LVSSGADAQLCVWDAVGWKKL 621
+V+ G D + VWD G KKL
Sbjct: 470 VVTCGDDKLIKVWDLSG-KKL 489
Score = 40 (19.1 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 8/33 (24%), Positives = 19/33 (57%)
Query: 634 VPETTIVNHIQFHPDQIHLLSI--HEGQIDVYE 664
+ + ++V + FHP LL++ G++ ++E
Sbjct: 344 IRQGSVVISMDFHPSHHTLLAVGCSSGEVTLWE 376
Score = 38 (18.4 bits), Expect = 1.4e-86, Sum P(3) = 1.4e-86
Identities = 6/18 (33%), Positives = 15/18 (83%)
Query: 307 DKLKFPSMDKSRLLSLIK 324
+++KF +MD + LL++++
Sbjct: 609 NQIKFWNMDNTNLLTVVE 626
>TAIR|locus:2159562 [details] [associations]
symbol:AT5G08560 "AT5G08560" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0007062 "sister chromatid
cohesion" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009888 "tissue development" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016926 "protein desumoylation"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 EMBL:AB006697
PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
HOGENOM:HOG000160946 OMA:IRGQFYQ EMBL:AY054535 EMBL:AY064639
IPI:IPI00526669 RefSeq:NP_001078546.1 RefSeq:NP_196473.1
UniGene:At.20607 ProteinModelPortal:Q9FNN2 SMR:Q9FNN2 IntAct:Q9FNN2
PaxDb:Q9FNN2 PRIDE:Q9FNN2 EnsemblPlants:AT5G08560.1
EnsemblPlants:AT5G08560.2 GeneID:830756 KEGG:ath:AT5G08560
TAIR:At5g08560 InParanoid:Q9FNN2 PhylomeDB:Q9FNN2
ProtClustDB:CLSN2687467 Genevestigator:Q9FNN2 Uniprot:Q9FNN2
Length = 589
Score = 116 (45.9 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 58/246 (23%), Positives = 109/246 (44%)
Query: 3 GSKMCIDKDTYTHLITLIMKFLEEENFKESLQALEQESKIFFN---VHRFGEIVMNGEWE 59
GSK I K + +IT + L + ++ LE+ES I + + F + V +G+W+
Sbjct: 58 GSKGVIRKSEFVRIITRALYSL---GYDKTGAMLEEESGISLHNSTIKLFLQQVKDGKWD 114
Query: 60 KAEKYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRI 119
++ K L D K F L + K+ E L + +A R ++ ++ R+
Sbjct: 115 QSVKTLHRIG-FPDEKAVKAASFLLLEQKFLEFLKVEKIADALRTLRNEMAPLRINTKRV 173
Query: 120 DCELAE-LLALKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSA 178
ELA L++ + + + +SR+K+++ L+ L+ + I+ +K + V NS
Sbjct: 174 H-ELASSLISPSSFISHTTSTPGKESVNSRSKVLEELQTLLPASVIIPEKRLECLVENSL 232
Query: 179 LSSLIKLICPSFEKETKEEL-IYLIHQFLNEEEFKETLHKLEQET-RVFF-DINYFREYI 235
+ + C F +L +Y HQ + +T LE T V+F ++ +Y+
Sbjct: 233 --HIQRDSCV-FHNTLDSDLSLYSDHQCGKHQIPSQTAQILESHTDEVWFLQFSHNGKYL 289
Query: 236 TSGEWD 241
S D
Sbjct: 290 ASSSKD 295
Score = 80 (33.2 bits), Expect = 8.8e-07, Sum P(2) = 8.8e-07
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 556 QDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYS-LSLNVLVSSGADAQLCVW 613
Q A G +DS + + T K +L GH + C+++S +L++L S+ D + +W
Sbjct: 501 QAFIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 54 (24.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 583 KGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSK 624
KG + I+C Y ++ D +C+WD G +K C K
Sbjct: 359 KGGISPISCGWYPDGQGIIAGM-TDRSICMWDLDGREKECWK 399
>WB|WBGene00004895 [details] [associations]
symbol:smu-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0007638 "mechanosensory behavior"
evidence=IGI] [GO:0048666 "neuron development" evidence=IGI]
[GO:0002119 "nematode larval development" evidence=IGI] [GO:0040011
"locomotion" evidence=IGI] [GO:0048644 "muscle organ morphogenesis"
evidence=IGI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0009792 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0048644 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011
GO:GO:0048666 HSSP:P16649 GO:GO:0007638 PROSITE:PS50897
InterPro:IPR006595 SMART:SM00668 GeneTree:ENSGT00700000104461
KO:K13111 OMA:NGHWDTV EMBL:Z81490 EMBL:AF330595 PIR:T20276
RefSeq:NP_493279.1 UniGene:Cel.19360 ProteinModelPortal:G5EEG7
SMR:G5EEG7 IntAct:G5EEG7 EnsemblMetazoa:CC4.3 GeneID:173175
KEGG:cel:CELE_CC4.3 CTD:173175 WormBase:CC4.3 NextBio:878585
Uniprot:G5EEG7
Length = 510
Score = 93 (37.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 39/171 (22%), Positives = 74/171 (43%)
Query: 448 IYSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKD 507
++S ++LV+ ++ ++W + + K L ++ YQ L+M + AA
Sbjct: 221 VFSPDANYLVSGSKDGFIEVWNYMNGK--LRKD------LKYQAQDNLMMMD--AA---- 266
Query: 508 SISCFAL-RGSHLFSASG--GKISIFSLETFQTLATF--ANPPPIATYFILLPQDLFAFG 562
+ C + R S + + GKI ++ +ET L F A+ + G
Sbjct: 267 -VRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSG 325
Query: 563 FDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 613
+D + VH + K +++GH + IT + YS N ++S D + VW
Sbjct: 326 GNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVW 376
Score = 92 (37.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 26/61 (42%), Positives = 33/61 (54%)
Query: 189 SFEKETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD----INYFREYITSGEWDNAE 244
S E E+ + +I LI QFL E TL L++ET V + I+ F ITSG WDN
Sbjct: 3 SIEIESSD-VIRLIEQFLKESNLHRTLAILQEETNVSLNTVDSIDGFCNEITSGNWDNVL 61
Query: 245 K 245
K
Sbjct: 62 K 62
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 317 SRLLSLIKQIMDW 329
SRLLSL+ Q + W
Sbjct: 159 SRLLSLLGQSLKW 171
>GENEDB_PFALCIPARUM|PFC0365w [details] [associations]
symbol:PFC0365w "conserved protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016363 "nuclear matrix"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 472 SNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIF- 530
+N + ++N +Y + + V + I KD ++ AL + S K S++
Sbjct: 303 NNNNDNDGSHLNNNEYIYD-NYQFVSAHVITKH-KDHVTSLALHPLENYFISSSKDSMWI 360
Query: 531 --SLETFQTLATFANPPPIATYFILLPQDL-FAFGFDDSSILVHCPCTKKTKAKLKGHQN 587
LET +T+ T + P + + P + F DS+I ++ +++ KA L GH
Sbjct: 361 LHDLETAKTIKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTK 420
Query: 588 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 647
+ CL++S + L SS D + +WD +K SFQT + ET N I F
Sbjct: 421 SLNCLSFSENGYYLASSSKDNTVKLWDL---RKA-----QSFQTITLNETP--NFISFDY 470
Query: 648 DQIHLLSIHEGQIDVYEAPTLNHTSQV-LLISH 679
+L E I +Y T N + + L SH
Sbjct: 471 SGKYLSIAVENDIQIYNFETKNQANLIKTLSSH 503
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 463 ATHKLWKWQSNKQSLEEENVNMESQLYQPSS 493
AT + K K +EE N++ Q++Q S
Sbjct: 112 ATRVIAKLLKEKNGYKEEIENLKKQIFQLKS 142
>UNIPROTKB|O77325 [details] [associations]
symbol:PFC0365w "PRP19-like protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016363 "nuclear
matrix" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00504 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0016363 GO:GO:0000151
EMBL:AL844502 KO:K10599 InterPro:IPR013915 Pfam:PF08606 HSSP:P32523
HOGENOM:HOG000177308 OMA:QWQELKV PIR:T18432 RefSeq:XP_001351160.1
ProteinModelPortal:O77325 IntAct:O77325 MINT:MINT-1739970
PRIDE:O77325 EnsemblProtists:PFC0365w:mRNA GeneID:814402
KEGG:pfa:PFC0365w EuPathDB:PlasmoDB:PF3D7_0308600
ProtClustDB:CLSZ2433438 Uniprot:O77325
Length = 532
Score = 139 (54.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 56/213 (26%), Positives = 93/213 (43%)
Query: 472 SNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSASGGKISIF- 530
+N + ++N +Y + + V + I KD ++ AL + S K S++
Sbjct: 303 NNNNDNDGSHLNNNEYIYD-NYQFVSAHVITKH-KDHVTSLALHPLENYFISSSKDSMWI 360
Query: 531 --SLETFQTLATFANPPPIATYFILLPQDL-FAFGFDDSSILVHCPCTKKTKAKLKGHQN 587
LET +T+ T + P + + P + F DS+I ++ +++ KA L GH
Sbjct: 361 LHDLETAKTIKTSKDNPSSFKHLAIHPDGMMFGIAAQDSNIHIYDIKSQEYKATLNGHTK 420
Query: 588 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 647
+ CL++S + L SS D + +WD +K SFQT + ET N I F
Sbjct: 421 SLNCLSFSENGYYLASSSKDNTVKLWDL---RKA-----QSFQTITLNETP--NFISFDY 470
Query: 648 DQIHLLSIHEGQIDVYEAPTLNHTSQV-LLISH 679
+L E I +Y T N + + L SH
Sbjct: 471 SGKYLSIAVENDIQIYNFETKNQANLIKTLSSH 503
Score = 42 (19.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 463 ATHKLWKWQSNKQSLEEENVNMESQLYQPSS 493
AT + K K +EE N++ Q++Q S
Sbjct: 112 ATRVIAKLLKEKNGYKEEIENLKKQIFQLKS 142
>POMBASE|SPAC343.04c [details] [associations]
symbol:SPAC343.04c "WD repeat protein, human WDR26
family, ubiquitin ligase complex subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0034657 "GID complex" evidence=ISO] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0044732 "mitotic spindle pole body" evidence=IDA] [GO:0045721
"negative regulation of gluconeogenesis" evidence=ISO] [GO:0010969
"regulation of pheromone-dependent signal transduction involved in
conjugation with cellular fusion" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 PomBase:SPAC343.04c GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044732
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045721
HSSP:P16649 PROSITE:PS50897 InterPro:IPR006595 SMART:SM00668
GO:GO:0034657 OrthoDB:EOG43R6WJ HOGENOM:HOG000160946 OMA:IRGQFYQ
PIR:T38653 RefSeq:NP_593424.1 ProteinModelPortal:Q9UT85
EnsemblFungi:SPAC343.04c.1 GeneID:2543079 KEGG:spo:SPAC343.04c
NextBio:20804107 Uniprot:Q9UT85
Length = 507
Score = 116 (45.9 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 44/167 (26%), Positives = 80/167 (47%)
Query: 6 MCIDKDTYTHLITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAE 62
M +D+ +I L+++FL + + ESL+ALE+E+ + +V R + V+ G+W AE
Sbjct: 1 MALDEKFQLEVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAE 60
Query: 63 KYLSAFTKLDDSNHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVF-SVSQNRIDC 121
S D+S + F L+K + C L R ++I+ L+ F S N+
Sbjct: 61 AAFSIMQLRDESKRKEAQFL-LQKQR-CLELARSGAI-CEAIYV--LQNFESTDFNKEKE 115
Query: 122 ELAELLALKDLRENEQL---SGYTNATSSRAKLIDSLKLLVKENRIL 165
L ++ + + N +L +GY N +R L++ L + +L
Sbjct: 116 RLVSIILESNNKSNNELITKNGYGN---TRLDLLNQLSEYISPEILL 159
Score = 60 (26.2 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 16/65 (24%), Positives = 29/65 (44%)
Query: 565 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSK 624
D + ++ K +L GH + + + +S L+S D + +WDA +KL
Sbjct: 234 DKTAIIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKL-RD 292
Query: 625 FLHSF 629
+ H F
Sbjct: 293 YKHGF 297
Score = 54 (24.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 585 HQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQ 644
H + + ++YS + L S+ D ++D V K++ F+ L+ V +I+
Sbjct: 212 HSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRV-------FR--LIGHIDTVAYIR 262
Query: 645 FHPDQIHLLS 654
+ PD +LLS
Sbjct: 263 WSPDDRYLLS 272
Score = 49 (22.3 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 19/66 (28%), Positives = 29/66 (43%)
Query: 510 SCFALRGSHLFSASGG---KISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGF--D 564
SCF + F SG KI I+ E+ + LAT + Y P D + F D
Sbjct: 433 SCFGGKDD-TFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGD 491
Query: 565 DSSILV 570
D+++ +
Sbjct: 492 DNTVRI 497
Score = 48 (22.0 bits), Expect = 0.00086, Sum P(3) = 0.00086
Identities = 16/59 (27%), Positives = 26/59 (44%)
Query: 557 DLFAF-GFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYS-LSLNVLVSSGADAQLCVW 613
D F G +D I + + K A L GH + +AY+ + S+G D + +W
Sbjct: 440 DTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVNYVAYNPVDPYQFASAGDDNTVRIW 498
Score = 41 (19.5 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 426 EPSECRTL---LLPDNSFGGRVVRLIYSHSGDFLVALTQTAT 464
+PSE T + D+S V ++ YSH+G +L + ++ T
Sbjct: 197 DPSELPTKEYHVFHDHS--DEVWQISYSHNGRYLASASKDKT 236
>ASPGD|ASPL0000006214 [details] [associations]
symbol:AN6385 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 PROSITE:PS00678 InterPro:IPR019775
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011047 SUPFAM:SSF50998 EMBL:AACD01000108
HOGENOM:HOG000091642 RefSeq:XP_663989.1 ProteinModelPortal:Q5AZ95
EnsemblFungi:CADANIAT00006594 GeneID:2871285 KEGG:ani:AN6385.2
OMA:LHPFEGH OrthoDB:EOG42NN9D Uniprot:Q5AZ95
Length = 434
Score = 128 (50.1 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 65/246 (26%), Positives = 104/246 (42%)
Query: 444 VVRLIYSHSGDFLVALTQTATHKLWKWQSN--KQSLEEENVNMESQLYQPSSKLVMTNDI 501
V + +S +G L + + T KLW S+ K ++E + +ES + P+ +L N
Sbjct: 86 VQSVAFSPNGQLLASGSSDTTIKLWNSASDSLKHTMEGHSDRVESVAFSPNGQL--WNPA 143
Query: 502 AADPKDSIS---------CFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYF 551
K +I F+ G L S S K I ++ T T
Sbjct: 144 IGSLKHTIEGHSDWVLSVAFSPDGQLLASGSAEKTIKLWDSATCGLKHTLGGHSNWVLPL 203
Query: 552 ILLPQD-LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQL 610
+ P L A G +D++I + P + K L+GH N+I LA+S + +L S +DA +
Sbjct: 204 VFSPDGRLLASGSNDATIKLWDPPSGSLKHTLEGHSNKIESLAFSPNGQLLASGSSDATI 263
Query: 611 CVWD-AVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQ--IDVYEAPT 667
+WD A G SF+ L + +V + F PD LL G I +++ T
Sbjct: 264 KLWDTATG----------SFRHTLKGHSDMVLSVVFSPDS-QLLESGSGDNTIKLWDPAT 312
Query: 668 --LNHT 671
L H+
Sbjct: 313 GILKHS 318
>DICTYBASE|DDB_G0278353 [details] [associations]
symbol:smu1 "suppressor of mec-8 and unc-52-like
protein" species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
dictyBase:DDB_G0278353 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P26449
PROSITE:PS50897 KO:K13111 OMA:NGHWDTV RefSeq:XP_642306.2
ProteinModelPortal:Q54Y96 EnsemblProtists:DDB0233537 GeneID:8621512
KEGG:ddi:DDB_G0278353 ProtClustDB:CLSZ2430773 Uniprot:Q54Y96
Length = 530
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDS 508
++H D +++ + K+W +S+ L Q P+S +V DI+ S
Sbjct: 368 FNHDEDRVISCSSDGKIKIWDAKSS-DCL---------QTITPTS-VVTVRDISIR---S 413
Query: 509 ISCFALRGSHLFSASGGKISIFSLETFQTLA-TFANPPPIATYFI--LLPQDLFAFGFDD 565
I+ L + +ISI S+++ QT++ TF + T+ + L P + + D+
Sbjct: 414 ITILLKNPEFLLVCNSSQISIVSMKS-QTISKTFTSENS-KTFLVCTLSPLQNYLYAVDE 471
Query: 566 SSILVHCPCTKKTKA-KLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 613
+IL + K K H + +++ + N+L ++G+D L +W
Sbjct: 472 DNILYTFDFNSGSLLNKFKIHDQEVISISHHPTKNLLATTGSDCLLKIW 520
Score = 81 (33.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 28/93 (30%), Positives = 44/93 (47%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNV----HRFGEIVMNGEWEKAEKYLSAF--- 68
+I LI++FL+E + SL AL++E+ I N F V NG W+ +S
Sbjct: 19 VIKLILQFLKENSLGNSLTALQEETGINLNAVDSKETFLNDVKNGNWDSVLTVVSTLRLS 78
Query: 69 -TKLDDSNHSKKMFFELRKHKYCEALCRHERTE 100
T L D L++++ C+ L R +TE
Sbjct: 79 TTLLMDLYEQIVELLHLKEYELCKYLIR--KTE 109
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 28/123 (22%), Positives = 54/123 (43%)
Query: 498 TNDIAADPKDSISCFALRGSHLFSASGG---KISIFSLETFQTLATF--ANPPPIATYFI 552
+ND D+I C A F A+G KI ++ +++ + L F A+ +
Sbjct: 267 SNDDFMMHDDAILCIAFSKDGEFLATGSLDNKIKVWQIKSGKCLRKFEPAHTNGVTCLQF 326
Query: 553 LLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCV 612
G DSS+ +H + K +GHQ+ + ++ + ++S +D ++ +
Sbjct: 327 SRNSTQILSGSFDSSLKIHGLKSGKALKIFRGHQSFVNDCCFNHDEDRVISCSSDGKIKI 386
Query: 613 WDA 615
WDA
Sbjct: 387 WDA 389
Score = 53 (23.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/66 (27%), Positives = 34/66 (51%)
Query: 267 QRQKYLEAVDRQQKLPSDFAERAHLFDDFKVLVE-RNPMLQDKL--KFPSMDKSRLLSLI 323
Q+++YL+ + Q+ D + F + + E R L ++L + ++ SRLLSL+
Sbjct: 118 QQERYLKLENHLQREYIDLGD----FYKYGITTEKRRKQLIEQLNNEIITVPSSRLLSLL 173
Query: 324 KQIMDW 329
Q + W
Sbjct: 174 SQSLHW 179
>ZFIN|ZDB-GENE-041014-277 [details] [associations]
symbol:wdr26b "WD repeat domain 26b" species:7955
"Danio rerio" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667
ZFIN:ZDB-GENE-041014-277 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AL929435 HSSP:P16649
GeneTree:ENSGT00530000063585 PROSITE:PS50897 InterPro:IPR006595
SMART:SM00668 EMBL:BX004824 IPI:IPI00504405 RefSeq:NP_001189371.1
UniGene:Dr.156389 UniGene:Dr.79849 ProteinModelPortal:Q5SP67
PRIDE:Q5SP67 Ensembl:ENSDART00000029894 GeneID:564794
KEGG:dre:564794 CTD:564794 HOGENOM:HOG000160946 HOVERGEN:HBG083958
InParanoid:Q5SP67 OMA:IRGQFYQ OrthoDB:EOG4GHZNV NextBio:20885564
Bgee:Q5SP67 Uniprot:Q5SP67
Length = 576
Score = 110 (43.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 43/147 (29%), Positives = 66/147 (44%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI + L +++ L QES + +F VM GEW+KAE L+ L
Sbjct: 55 VIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALM 114
Query: 73 DS-NHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLA--L 129
S N +M F L + KY E L + EA + R +L + +RI L+
Sbjct: 115 HSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSHA 174
Query: 130 KDLRENEQLSGYTNATSSRAKLIDSLK 156
+DL+ + G SR +L+D L+
Sbjct: 175 EDLKAKAEWEG--KGAGSRCRLLDKLQ 199
Score = 59 (25.8 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 12/59 (20%), Positives = 30/59 (50%)
Query: 556 QDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGAD-AQLCVW 613
+D A G +D + + ++ +L GH + C++++ + L++S +D + +W
Sbjct: 495 EDFIASGSEDHKVYIWHKRSELPIVELTGHTRTVNCVSWNPCIPSLMASASDDGTVRIW 553
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.134 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 701 681 0.00079 121 3 11 22 0.37 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 624 (66 KB)
Total size of DFA: 372 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 64.75u 0.11s 64.86t Elapsed: 00:00:03
Total cpu time: 64.75u 0.11s 64.86t Elapsed: 00:00:03
Start: Tue May 21 13:03:57 2013 End: Tue May 21 13:04:00 2013