BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 005342
(701 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q27GK7|TPR4_ARATH Topless-related protein 4 OS=Arabidopsis thaliana GN=TPR4 PE=1 SV=2
Length = 1135
Score = 248 bits (634), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 136/283 (48%), Positives = 180/283 (63%), Gaps = 8/283 (2%)
Query: 397 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 456
++ SLPD + A EKS KL I+E S+ RTL LPD RVV+LIY++SG +
Sbjct: 735 DNRSLPDVKPRI-ADDAEKSKTWKLTEISERSQLRTLRLPDTLLPARVVKLIYTNSGGAI 793
Query: 457 VALTQTATHKLWKWQ-SNKQSLEEENVNMESQLYQPSSKLVMTNDI-AADPKDSISCFAL 514
+AL + A HKLWKWQ S + L + N N+ QL+QPSS ++MTND + +D + CFAL
Sbjct: 794 LALAENAAHKLWKWQKSERNLLGKANSNVPPQLWQPSSGVLMTNDTREGNKEDVVPCFAL 853
Query: 515 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 570
S++ SASGGKIS+F++ TF+T+ TF PPP AT PQD + A G DDSSI +
Sbjct: 854 SKNDSYVMSASGGKISLFNMMTFKTMTTFMAPPPAATSLAFHPQDNNIIAIGMDDSSIQI 913
Query: 571 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 630
+ + K+KLKGHQ R+T LA+S LNVLVSSGAD+QLCVW GW+K SK +
Sbjct: 914 YNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWSMDGWEKQASKQIQ-IP 972
Query: 631 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTLNHTSQ 673
+G P +QFH DQIH+L +H Q+ +YEAP L + Q
Sbjct: 973 SGHSPNPLAHTRVQFHQDQIHVLVVHASQLAIYEAPKLENMKQ 1015
Score = 157 bits (396), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 112/168 (66%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FK+++ LE+ES FFN+ F + V GEW+ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL + + +A I K+LKVFS + E+ LL L + REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLTLTNFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+R ++ LK L++ N + +DKL FP + NS L +LI
Sbjct: 128 EQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLI 175
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 42/193 (21%)
Query: 196 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 255
EL++LI QFL+EE+FK+T+H+LE+E+ FF++ YF + +T+GEWD+ EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKDTVHRLEKESGFFFNMRYFEDSVTAGEWDDVEKYLSGFTKVDD 65
Query: 256 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 287
N YS K+F +I++QKYLEA+D++ K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITMLLTLTNFR 125
Query: 288 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 333
R + + K L+E NP+ +DKL+FPS+ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSLKNSRLRTLINQSLNWQHQL 185
Query: 334 CINVMPNANNETI 346
C N PN + +T+
Sbjct: 186 CKNPRPNPDIKTL 198
>sp|Q0WV90|TPR1_ARATH Topless-related protein 1 OS=Arabidopsis thaliana GN=TPR1 PE=1 SV=3
Length = 1120
Score = 237 bits (604), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 180/278 (64%), Gaps = 7/278 (2%)
Query: 397 ESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGDFL 456
+S ++ D + +S +KS KL + EPS+CR+L LP+N ++ RLI+++SG+ +
Sbjct: 713 DSRNMVDVKPVITEESNDKSKVWKLTEVGEPSQCRSLRLPENMRVTKISRLIFTNSGNAI 772
Query: 457 VALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLVMTNDIA-ADPKDSISCFAL 514
+AL A H LWKWQ N + + + ++ Q +QP+S ++MTND+A +P++++ CFAL
Sbjct: 773 LALASNAIHLLWKWQRNDRNATGKATASLPPQQWQPASGILMTNDVAETNPEEAVPCFAL 832
Query: 515 --RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILV 570
S++ SASGGKIS+F++ TF+T+ATF PPP AT+ PQD + A G DDS+I +
Sbjct: 833 SKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAFHPQDNNIIAIGMDDSTIQI 892
Query: 571 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQ 630
+ + K+KLKGH RIT LA+S LNVLVSSGADAQLCVW+ GW+K SK L Q
Sbjct: 893 YNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWNTDGWEKQKSKVLQIPQ 952
Query: 631 TGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTL 668
G + +QFH DQ+H L +HE Q+ +YE L
Sbjct: 953 -GRSTSSLSDTRVQFHQDQVHFLVVHETQLAIYETTKL 989
Score = 169 bits (427), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 117/168 (69%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKE++ LEQES FFN+ F + V NG W++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL RH+R +A I KDLKVFS + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+RA ++ LK L++ N + +DKL FP + S L +LI
Sbjct: 128 EQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLI 175
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 122/232 (52%), Gaps = 47/232 (20%)
Query: 196 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 255
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65
Query: 256 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 287
N YS K+F +I++QKYLEA+DR K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDRHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125
Query: 288 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 333
RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRTSRLRTLINQSLNWQHQL 185
Query: 334 CINVMPNANNETISLKDFPTVSNLRYASS-----ILTDKPNQEGRPLDASSG 380
C N PN + +T+ + + N A S +L P EG P + G
Sbjct: 186 CKNPRPNPDIKTLFVDHSCRLPNDARAPSPVNNPLLGSLPKAEGFPPLGAHG 237
>sp|Q94AI7|TPL_ARATH Protein TOPLESS OS=Arabidopsis thaliana GN=TPL PE=1 SV=1
Length = 1131
Score = 234 bits (597), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/297 (42%), Positives = 185/297 (62%), Gaps = 7/297 (2%)
Query: 378 SSGDDSNDSSCFNDNNQSRESTSLPDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPD 437
S+G ++ + + +S ++ D + +S +KS KL ++EPS+CR+L LP+
Sbjct: 705 SAGHADRSANVVSIQGMNGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPE 764
Query: 438 NSFGGRVVRLIYSHSGDFLVALTQTATHKLWKWQSN-KQSLEEENVNMESQLYQPSSKLV 496
N ++ RLI+++SG+ ++AL A H LWKWQ N + + + ++ Q +QP+S ++
Sbjct: 765 NLRVAKISRLIFTNSGNAILALASNAIHLLWKWQRNERNATGKATASLPPQQWQPASGIL 824
Query: 497 MTNDIA-ADPKDSISCFAL--RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFIL 553
MTND+A +P++++ CFAL S++ SASGGKIS+F++ TF+T+ATF PPP AT+
Sbjct: 825 MTNDVAETNPEEAVPCFALSKNDSYVMSASGGKISLFNMMTFKTMATFMPPPPAATFLAF 884
Query: 554 LPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLC 611
PQD + A G DDS+I ++ + K+KLKGH RIT LA+S LNVLVSSGADAQLC
Sbjct: 885 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 944
Query: 612 VWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSIHEGQIDVYEAPTL 668
VW+ GW+K SK L G +QFH DQ H L +HE Q+ +YE L
Sbjct: 945 VWNTDGWEKQRSKVL-PLPQGRPNSAPSDTRVQFHQDQAHFLVVHETQLAIYETTKL 1000
Score = 169 bits (429), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 118/168 (70%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKE++ LEQES FFN+ F + V NG W++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL +H+R +A I KDLKVFS + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+RA ++ LK L++ N + +DKL FP + NS L +LI
Sbjct: 128 EQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLI 175
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 42/193 (21%)
Query: 196 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 255
EL++LI QFL+EE+FKET+HKLEQE+ FF++ YF + + +G WD EKYLS FT ++D
Sbjct: 6 RELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEDEVHNGNWDEVEKYLSGFTKVDD 65
Query: 256 NTYSAKMFSQIQRQKYLEAVDRQQ------------KLPSDFAE---------------- 287
N YS K+F +I++QKYLEA+D+ K+ S F E
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDKHDRPKAVDILVKDLKVFSTFNEELFKEITQLLTLENFR 125
Query: 288 --------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 333
RA + + K L+E NP+ +DKL+FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKSARAIMLVELKKLIEANPLFRDKLQFPTLRNSRLRTLINQSLNWQHQL 185
Query: 334 CINVMPNANNETI 346
C N PN + +T+
Sbjct: 186 CKNPRPNPDIKTL 198
>sp|Q9LRZ0|TPR2_ARATH Topless-related protein 2 OS=Arabidopsis thaliana GN=TPR2 PE=1 SV=2
Length = 1131
Score = 198 bits (503), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 108/262 (41%), Positives = 160/262 (61%), Gaps = 13/262 (4%)
Query: 412 SLEKSVNLKLQLINEPSECRTLLLPDNSFG-GRVVRLIYSHSGDFLVALTQTATHKLWKW 470
S++KS L+L I +P++CR + +PD+ +V RL+Y++SG ++AL +LWKW
Sbjct: 735 SVDKSKPLELTEIVDPTQCRQVTMPDSKDSVSKVARLLYTNSGVGVLALGSNGVQRLWKW 794
Query: 471 QSNKQS-LEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFAL--RGSHLFSASGGKI 527
N+Q+ + ++ Q +QP+S L+M ND+ +P+ S+ C AL S++ SA GGK+
Sbjct: 795 IRNEQNPTGKATASVTPQHWQPNSGLLMANDVPENPEGSVPCIALSKNDSYVMSACGGKV 854
Query: 528 SIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKGH 585
S+F++ TF+ + TF PPP +T+ PQD + A G +DSSI ++ + K KLKGH
Sbjct: 855 SLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSSIHIYNVRVDEVKTKLKGH 914
Query: 586 QNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN--HI 643
Q IT LA+S +LN+LVSSGADAQL W A W+K S + L P V +
Sbjct: 915 QKHITGLAFSTALNILVSSGADAQLFFWTADSWEKKKSSAIQ-----LPPGKAPVGDTRV 969
Query: 644 QFHPDQIHLLSIHEGQIDVYEA 665
QFH DQI LL HE Q+ +Y+A
Sbjct: 970 QFHNDQIQLLVSHETQLAIYDA 991
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/168 (48%), Positives = 115/168 (68%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FL+EE FKES+ LEQES FFN+ F E + GEW++ EKYLS FTK+DD+
Sbjct: 8 LVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL R++R +A I KDLKVF+ + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + S+R+ + LK L++ N + ++KL FP S L +LI
Sbjct: 128 EQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLI 175
Score = 139 bits (351), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 42/194 (21%)
Query: 197 ELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMNDN 256
EL++LI QFL+EE+FKE++HKLEQE+ FF+I YF E +GEWD EKYLS FT ++DN
Sbjct: 7 ELVFLILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDN 66
Query: 257 TYSAKMFSQIQRQKYLEAVDRQQKLPS-----------------------------DFAE 287
YS K+F +I++QKYLEA+DR + + +F E
Sbjct: 67 RYSMKIFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFRE 126
Query: 288 -------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPYC 334
R+ ++ + K L+E NP+ ++KL FPS SRL +LI Q ++W C
Sbjct: 127 NEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLC 186
Query: 335 INVMPNANNETISL 348
N PN + +T+ L
Sbjct: 187 KNPRPNPDIKTLFL 200
>sp|Q84JM4|TPR3_ARATH Topless-related protein 3 OS=Arabidopsis thaliana GN=TPR3 PE=1 SV=1
Length = 1108
Score = 186 bits (471), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/264 (38%), Positives = 161/264 (60%), Gaps = 16/264 (6%)
Query: 412 SLEKSVNLKLQLINEPSECRTLLLPDNSFGG-RVVRLIYSHSGDFLVALTQTATHKLWKW 470
S +K + +L I +PS+C LPD + +VV+L+Y++SG ++AL +LWKW
Sbjct: 723 STDKPKSWQLAEILDPSQCFQATLPDTAGSSTKVVQLLYTNSGAGILALGSNGIQRLWKW 782
Query: 471 QSNKQSLE-EENVNMESQLYQPSSKLVMTNDIAA-DPKDSISCFAL--RGSHLFSASGGK 526
N+Q+ + + Q +QP+S L+MTND++ + +++ C AL S++ SA+GGK
Sbjct: 783 VPNEQNPSGKATATVVPQHWQPNSGLLMTNDVSGVNLENAAPCIALSKNDSYVMSAAGGK 842
Query: 527 ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDDSSILVHCPCTKKTKAKLKG 584
+S+F++ TF+ + TF PPP +T+ PQD + A G +DS+I ++ + K+KLKG
Sbjct: 843 VSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNVIAIGMEDSTIHIYNVRVDEVKSKLKG 902
Query: 585 HQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVN--- 641
HQ RIT LA+S +LN+LVSSGADAQ+C W W+K S + +P N
Sbjct: 903 HQKRITGLAFSTALNILVSSGADAQICFWSIDTWEKRKSVAIQ------MPAGKAANGDT 956
Query: 642 HIQFHPDQIHLLSIHEGQIDVYEA 665
+QFH DQ+ +L +HE Q+ V++A
Sbjct: 957 RVQFHVDQLRILVVHETQLAVFDA 980
Score = 166 bits (419), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 115/168 (68%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFFNVHRFGEIVMNGEWEKAEKYLSAFTKLDDSN 75
L+ LI++FLEEE FKES+ LE+ES FFN F E V+ GEW+ E YLS FTK+DD+
Sbjct: 8 LVFLILQFLEEEKFKESVHRLEKESGFFFNTKYFDEKVLAGEWDDVETYLSGFTKVDDNR 67
Query: 76 HSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLALKDLREN 135
+S K+FFE+RK KY EAL R E+ +A I +DL+VFS + E+ +LL L++ REN
Sbjct: 68 YSMKIFFEIRKQKYLEALDRQEKAKAVEILVQDLRVFSTFNEELYKEITQLLTLQNFREN 127
Query: 136 EQLSGYTNATSSRAKLIDSLKLLVKENRILQDKLIFPCVNNSALSSLI 183
EQLS Y + ++R ++ LK L++ N + +DKL+FP + +S L +LI
Sbjct: 128 EQLSKYGDTKTARGIMLGELKKLIEANPLFRDKLMFPTLRSSRLRTLI 175
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 42/211 (19%)
Query: 196 EELIYLIHQFLNEEEFKETLHKLEQETRVFFDINYFREYITSGEWDNAEKYLSAFTNMND 255
EL++LI QFL EE+FKE++H+LE+E+ FF+ YF E + +GEWD+ E YLS FT ++D
Sbjct: 6 RELVFLILQFLEEEKFKESVHRLEKESGFFFNTKYFDEKVLAGEWDDVETYLSGFTKVDD 65
Query: 256 NTYSAKMFSQIQRQKYLEAVDRQQKLPS-----------------------------DFA 286
N YS K+F +I++QKYLEA+DRQ+K + +F
Sbjct: 66 NRYSMKIFFEIRKQKYLEALDRQEKAKAVEILVQDLRVFSTFNEELYKEITQLLTLQNFR 125
Query: 287 E-------------RAHLFDDFKVLVERNPMLQDKLKFPSMDKSRLLSLIKQIMDWWVPY 333
E R + + K L+E NP+ +DKL FP++ SRL +LI Q ++W
Sbjct: 126 ENEQLSKYGDTKTARGIMLGELKKLIEANPLFRDKLMFPTLRSSRLRTLINQSLNWQHQL 185
Query: 334 CINVMPNANNETISLKDFPTVSNLRYASSIL 364
C N PN + +T+ T+ N A S +
Sbjct: 186 CKNPRPNPDIKTLFTDHTCTLPNGPLAPSAV 216
>sp|Q06078|UTP21_YEAST U3 small nucleolar RNA-associated protein 21 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UTP21 PE=1
SV=1
Length = 939
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 38/90 (42%)
Query: 525 GKISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKG 584
G + + L PI DLFA DD SI+V T++ +L G
Sbjct: 524 GIVGFYDFNKSTLLGKLKLDAPITAMVYHRSSDLFALALDDLSIVVIDAVTQRVVRQLWG 583
Query: 585 HQNRITCLAYSLSLNVLVSSGADAQLCVWD 614
H NRIT +S +VS+ D+ + WD
Sbjct: 584 HSNRITAFDFSPEGRWIVSASLDSTIRTWD 613
>sp|Q54S79|WDR3_DICDI WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum
GN=wdr3 PE=3 SV=1
Length = 942
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 29/201 (14%)
Query: 470 WQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSISCFALRGSHLFSA-SGGKIS 528
W KQ L + LY+ K +TN C + G+ L S S G I
Sbjct: 42 WDLRKQVLNQ-------SLYEEDIKAEVTN----------VCLSKDGALLASGYSDGSIR 84
Query: 529 IFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQN 587
I+S+ +Q A F + + T ++ G D+ ++V T+ +L+GH++
Sbjct: 85 IWSMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDIITESGLFRLRGHRD 144
Query: 588 RITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHP 647
+IT + N L++S D + +WD ++ H QT +V + I +P
Sbjct: 145 QITSVKLLERSNHLITSSKDGFIKIWD--------TETQHCIQT-IVGHRNPIWGIDVNP 195
Query: 648 DQIHLLS-IHEGQIDVYEAPT 667
D+ L S + QI + P+
Sbjct: 196 DETRLCSCTSDNQIRFWRIPS 216
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 516 GSHLFSASGGKISIFSLETFQTL--ATFANPPPIATYFILLPQD--LFAFGFDDSSILVH 571
G + G +ISI+ L Q L + + + L +D L A G+ D SI +
Sbjct: 28 GKLAITGCGERISIWDLRK-QVLNQSLYEEDIKAEVTNVCLSKDGALLASGYSDGSIRIW 86
Query: 572 CPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 616
+ +A GH+ +T + ++ N+LVS D ++ VWD +
Sbjct: 87 SMSDYQLQAVFNGHRGSVTTMTFNRLGNILVSGSKDTEVIVWDII 131
>sp|Q5SP67|WDR26_DANRE WD repeat-containing protein 26 OS=Danio rerio GN=wdr26 PE=1 SV=1
Length = 576
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI + L +++ L QES + +F VM GEW+KAE L+ L
Sbjct: 55 VIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNELKALM 114
Query: 73 DS-NHSKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRIDCELAELLA--L 129
S N +M F L + KY E L + EA + R +L + +RI L+
Sbjct: 115 HSPNAIVRMKFLLLQQKYLEYLEDGKVLEALQVLRGELTPLKYNTDRIHVLSGYLMCSHA 174
Query: 130 KDLRENEQLSGYTNATSSRAKLIDSLK 156
+DL+ + G SR +L+D L+
Sbjct: 175 EDLKAKAEWEG--KGAGSRCRLLDKLQ 199
Score = 37.4 bits (85), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 193 ETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD---INYFREYITSGEWDNAEKYLSA 249
+ +E++I LI Q L+ +T+ L QE+ + FR ++ GEWD AE L+
Sbjct: 50 QAEEDVIRLIGQHLHGLGLNQTVDLLMQESGCRLEHSSATKFRNHVMEGEWDKAENDLNE 109
Query: 250 FTN-MNDNTYSAKMFSQIQRQKYLEAVD 276
M+ +M + +QKYLE ++
Sbjct: 110 LKALMHSPNAIVRMKFLLLQQKYLEYLE 137
>sp|Q8YTC2|Y2800_NOSS1 Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr2800 PE=4 SV=1
Length = 1258
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 120/314 (38%), Gaps = 54/314 (17%)
Query: 402 PDADSAVCAKSLEKSVNLKLQLINEPSECRTLLLPDNSFGGRVVRLIYSHSGD--FLVAL 459
PD + C SL++SV L CRT +G L + S D L +
Sbjct: 904 PDGQTLACV-SLDQSVRLW--------NCRTGQCLKAWYGNTDWALPVAFSPDRQILASG 954
Query: 460 TQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDIAADPK----DSISCFA 513
+ T KLW WQ+ K SLE + + P S+ + + + + + CF
Sbjct: 955 SNDKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQ 1014
Query: 514 LRGSH-------LFSASGGKIS---------IFSLETFQTLATFANPPPIATYFILLPQD 557
+ H +F G I+ ++++ T Q L T + P
Sbjct: 1015 ILLEHTDWVYAVVFHPQGKIIATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDG 1074
Query: 558 -LFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 616
L A D S+ + CT + L+GH NR+ +S + ++ + D + +WD
Sbjct: 1075 QLLASASADQSVRLWDCCTGRCVGILRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWD-- 1132
Query: 617 GWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSI-HEGQIDVYEAPT-------L 668
W++ K L + L T V I F PD L S H+ + +++ T +
Sbjct: 1133 -WQQ--GKCLKT----LTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNTGKCHHICI 1185
Query: 669 NHTSQVLLISHIMF 682
HT L+S + F
Sbjct: 1186 GHTH---LVSSVAF 1196
Score = 33.5 bits (75), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
Query: 559 FAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGW 618
A G D +I + T + GH N + +AYS +LVS D + +WD
Sbjct: 825 LASGSGDRTIKIWNYHTGECLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQ-- 882
Query: 619 KKLCSKFLHSFQTGLVPETTIVNHIQFHPD 648
+C K LH T V + F PD
Sbjct: 883 THICIKTLHG-------HTNEVCSVAFSPD 905
>sp|Q8C6G8|WDR26_MOUSE WD repeat-containing protein 26 OS=Mus musculus GN=Wdr26 PE=1 SV=3
Length = 641
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI + L +++ L QES + +F VM G+W+KAE L+ L
Sbjct: 107 VIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLV 166
Query: 73 DSNHS-----------------KKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVS 115
S H+ +M F L + KY E L + EA + R +L +
Sbjct: 167 HSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYN 226
Query: 116 QNRIDCELAELLA--LKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRIL 165
RI L+ +DLR + G T+SR+KL+D L+ + + +L
Sbjct: 227 TERIHVLSGYLMCSHAEDLRAKAEWEG--KGTASRSKLLDKLQTYLPPSVML 276
>sp|Q9H7D7|WDR26_HUMAN WD repeat-containing protein 26 OS=Homo sapiens GN=WDR26 PE=1 SV=3
Length = 661
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 73/172 (42%), Gaps = 24/172 (13%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI + L +++ L QES + +F VM G+W+KAE L+ L
Sbjct: 127 VIRLIGQHLNGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGDWDKAENDLNELKPLV 186
Query: 73 DSNHS-----------------KKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVS 115
S H+ +M F L + KY E L + EA + R +L +
Sbjct: 187 HSPHAIVVRGALEISQTLLGIIVRMKFLLLQQKYLEYLEDGKVLEALQVLRCELTPLKYN 246
Query: 116 QNRIDCELAELLA--LKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRIL 165
RI L+ +DLR + G T+SR+KL+D L+ + + +L
Sbjct: 247 TERIHVLSGYLMCSHAEDLRAKAEWEG--KGTASRSKLLDKLQTYLPPSVML 296
>sp|Q28D01|WDR26_XENTR WD repeat-containing protein 26 OS=Xenopus tropicalis GN=wdr26 PE=2
SV=2
Length = 614
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI + L +++ L QES + +F VM GEW+KAE L+ L
Sbjct: 71 VIRLIGQHLHGLGLNQTVDLLMQESGCRLEHPSATKFRNHVMEGEWDKAENDLNELKSLV 130
Query: 73 DSNHS--------------------------KKMFFELRKHKYCEALCRHERTEADSIFR 106
S H+ ++M F L + KY E L + EA + R
Sbjct: 131 HSPHAVAACRPSSGGSGSEHSPTSCPTADVIRRMKFLLLQQKYLEYLEDGKVLEALQVLR 190
Query: 107 KDLKVFSVSQNRIDCELAELLA--LKDLRENEQLSGYTNATSSRAKLIDSLKLLVKENRI 164
+L + RI L+ DLR + G T+SR+KL+D L+ + + +
Sbjct: 191 CELTPLKYNTERIHVLSGYLMCSHADDLRAKAEWEG--KGTASRSKLLDKLQTYLPPSVM 248
Query: 165 L 165
L
Sbjct: 249 L 249
>sp|Q9UT85|YIPC_SCHPO Uncharacterized WD repeat-containing protein C343.04c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC343.04c PE=4 SV=1
Length = 507
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 6 MCIDKDTYTHLITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAE 62
M +D+ +I L+++FL + + ESL+ALE+E+ + +V R + V+ G+W AE
Sbjct: 1 MALDEKFQLEVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAE 60
Query: 63 KYLSAFTKLDDSNHSKKMFFELRKHKYCEALCR 95
S +L D + K+ F L+K + C L R
Sbjct: 61 AAFS-IMQLRDESKRKEAQFLLQKQR-CLELAR 91
Score = 39.7 bits (91), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 47/82 (57%), Gaps = 8/82 (9%)
Query: 197 ELIYLIHQFLNEEEFKETLHKLEQETRVFF---DINYFREYITSGEWDNAEKYLSAFTNM 253
E+I+L+ QFLN+ + E+L LE+ET + D+ ++ + G+W AE +AF+ M
Sbjct: 10 EVIHLLLQFLNDYGYDESLKALEKETGLVSETEDVKRLKQAVLQGDWITAE---AAFSIM 66
Query: 254 NDNTYSAKMFSQ--IQRQKYLE 273
S + +Q +Q+Q+ LE
Sbjct: 67 QLRDESKRKEAQFLLQKQRCLE 88
>sp|P38129|TAF5_YEAST Transcription initiation factor TFIID subunit 5 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF5 PE=1
SV=1
Length = 798
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 512 FALRGSHLFSASGGKI-SIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSIL 569
F G ++F+ S K ++ + T ++ F + P+ + + + G +D I
Sbjct: 617 FHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIIN 676
Query: 570 VHCPCTKKTKAKLKGH-QNRITCLAYSLSLNVLVSSGADAQLCVWD 614
V T K +++GH +N I L+YS NVL+S GAD + VWD
Sbjct: 677 VWDIGTGKRLKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWD 722
>sp|A6H603|NWD1_MOUSE NACHT and WD repeat domain-containing protein 1 OS=Mus musculus
GN=Nwd1 PE=2 SV=2
Length = 1563
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 13/80 (16%)
Query: 546 PIATYFILLPQDLFA----------FGFDDSSILVH-CPCTKKTKAKLKGHQNRITCLAY 594
P T++ LP+ + + +G D S+ ++ C C+K L+ H +R++C+
Sbjct: 1339 PTYTFYTQLPETIVSVAVLADYRVVYGMSDGSLFLYDCACSKVFP--LEAHGSRVSCVEV 1396
Query: 595 SLSLNVLVSSGADAQLCVWD 614
S S + VS DA LC+WD
Sbjct: 1397 SHSEQLAVSGAEDALLCLWD 1416
>sp|Q15269|PWP2_HUMAN Periodic tryptophan protein 2 homolog OS=Homo sapiens GN=PWP2 PE=1
SV=2
Length = 919
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 30/191 (15%)
Query: 452 SGDFLV-ALTQTATHKLWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMT--NDIAADPK 506
SGD++ + +W+WQS L+++ +M + Y P + ++T +D
Sbjct: 341 SGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVW 400
Query: 507 DSIS--CFALRGSH-------LFSASG---------GKISIFSLETFQTLATFANPPPIA 548
+++S CF H F+A+G G + F L ++ TF +P P
Sbjct: 401 NTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRP-- 458
Query: 549 TYFILLPQD----LFAFGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVS 603
T F + D + + G DS I V T + L GH+ I+ L ++ +VL S
Sbjct: 459 TQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSVLAS 518
Query: 604 SGADAQLCVWD 614
+ D + +WD
Sbjct: 519 ASWDKTVRLWD 529
>sp|Q96P53|WDFY2_HUMAN WD repeat and FYVE domain-containing protein 2 OS=Homo sapiens
GN=WDFY2 PE=2 SV=2
Length = 400
Score = 43.1 bits (100), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 512 FALRGSHLFSAS-GGKISIFSLE--TFQTLATFANPPPIATYFILLP--QDLFAFGFDDS 566
F + H+F G+++I LE + TF T P + LF+ D S
Sbjct: 163 FDVETRHVFIGDHSGQVTILKLEQENCTLVTTFRGHTGGVTALCWDPVQRVLFSGSSDHS 222
Query: 567 SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 614
I+ K T +L+GH +R+ L+Y+ L+S G D + VW+
Sbjct: 223 VIMWDIGGRKGTAIELQGHNDRVQALSYAQHTRQLISCGGDGGIVVWN 270
>sp|Q7ZUV2|KTNB1_DANRE Katanin p80 WD40 repeat-containing subunit B1 OS=Danio rerio
GN=katnb1 PE=2 SV=1
Length = 694
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 62/151 (41%), Gaps = 13/151 (8%)
Query: 508 SISCFALRGSHLFSASG---GKISIFSLETFQTLATFANPPPIATYFILLPQ-DLFAFGF 563
++ C S +G G + ++ LE + L T + P + A G
Sbjct: 65 AVGCIQFNSSEERVVAGSLSGSLRLWDLEAAKILRTLMGHKASISSLDFHPMGEYLASGS 124
Query: 564 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCS 623
DS+I + K + KGH + CLA+S L S+ D+ + +WD + K +
Sbjct: 125 VDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKWLASASDDSTVKLWDLIAGKMI-- 182
Query: 624 KFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 654
T T+ VN +QFHP++ L S
Sbjct: 183 -------TEFTSHTSAVNVVQFHPNEYLLAS 206
>sp|Q8BU03|PWP2_MOUSE Periodic tryptophan protein 2 homolog OS=Mus musculus GN=Pwp2 PE=1
SV=1
Length = 919
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 30/200 (15%)
Query: 443 RVVRLIYSHSGDFLV-ALTQTATHKLWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMT- 498
RV + + SGD++ + +W+WQS L+++ +M + Y P + ++T
Sbjct: 332 RVASVAINSSGDWIAFGCSGMGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTG 391
Query: 499 -NDIAADPKDSIS--CFALRGSH----------------LFSASGGKISIFSLETFQTLA 539
+D +++S CF H + S+ G + F L ++
Sbjct: 392 GDDGKVKVWNTLSGFCFVTLTEHSSGVTGVTFTTTGHVIVTSSLDGTVRAFDLHRYRNFR 451
Query: 540 TFANPPPIATYFILLPQD----LFAFGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAY 594
TF +P P T F + D + + G DS I V T + L GH+ ++ L +
Sbjct: 452 TFTSPRP--TQFSCVAVDSSGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPVSGLCF 509
Query: 595 SLSLNVLVSSGADAQLCVWD 614
+ ++L S+ D + +WD
Sbjct: 510 NPMKSILASASWDKTVRLWD 529
>sp|Q8L3Z8|FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabidopsis thaliana GN=FZR2 PE=1 SV=1
Length = 483
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 69/174 (39%), Gaps = 16/174 (9%)
Query: 492 SSKLVMTNDIAADPKDSISCFALRGSHL-FSASGGKISIFSLETFQTLATFANPPPIATY 550
SSK+ D+ A+ +ALRG+HL S GK+ I+ + T +
Sbjct: 205 SSKVTKLCDLGAEDSVCSVGWALRGTHLAVGTSTGKVQIWDASRCKRTRTMEGHR-LRVG 263
Query: 551 FILLPQDLFAFGFDDSSILVH-CPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQ 609
+ + + G D SIL C + +KL GH++ + L +S L S G D +
Sbjct: 264 ALAWGSSVLSSGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNR 323
Query: 610 LCVWDAVGWKKLCSKFLHSFQTGL--VPETTIVNHIQFHPDQIHLLSIHEGQID 661
L VW+ HS Q L T V I + P LL+ G D
Sbjct: 324 LFVWNQ-----------HSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTAD 366
>sp|Q5XJS5|THOC6_DANRE THO complex subunit 6 homolog OS=Danio rerio GN=thoc6 PE=2 SV=1
Length = 323
Score = 41.6 bits (96), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 517 SHLFSASGGKISIFSLETF---QTLATFANPP--------PIATYFILLPQDL-FAFGFD 564
SHL SA G+IS +S T A + P P I+ P+D G
Sbjct: 71 SHLLSAGNGEISAWSWAELIKKSTKAAWTRKPNYETSLEIPEINAMIINPKDNNLIVGGG 130
Query: 565 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDA 615
D++I + T K+ LKGH + I CL++ ++S G D + +WD+
Sbjct: 131 DNNIHIMDMETGTFKSVLKGHTDYIHCLSFKEREGEILSGGEDGAVRIWDS 181
>sp|Q9SJT9|COPA2_ARATH Coatomer subunit alpha-2 OS=Arabidopsis thaliana GN=At2g21390 PE=2
SV=1
Length = 1218
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 78/190 (41%), Gaps = 36/190 (18%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDI----- 501
+ H ++V+ + T ++W WQS L N + + P LV++ +
Sbjct: 101 FHHENPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 502 ----------AADPKDSISCFALRGSHLFSASGGKISI--FSLETFQTLATFANPPPIAT 549
+A P D + F+ S LF GG +I + LE +A+ P
Sbjct: 161 VWDIGALKKKSASPADDLMRFSQMNSDLF---GGVDAIVKYVLEGHDRGVNWASFHPT-- 215
Query: 550 YFILLPQDLFAFGFDDSSILVHCPCTKKTKA----KLKGHQNRITCLAYSLSLNVLVSSG 605
LP L G DD + + +TKA L+GH N ++ + + +++VS+
Sbjct: 216 ----LP--LIVSGADDRQVKLWR--MNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNS 267
Query: 606 ADAQLCVWDA 615
D + VWDA
Sbjct: 268 EDKSIRVWDA 277
>sp|Q5RFQ3|PWP2_PONAB Periodic tryptophan protein 2 homolog OS=Pongo abelii GN=PWP2 PE=2
SV=1
Length = 918
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 452 SGDFLV-ALTQTATHKLWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMTNDIAADPK-- 506
SGD++ + +W+WQS L+++ +M + Y P + ++T K
Sbjct: 338 SGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDGQYIVTGGDDGKVKVW 397
Query: 507 DSIS--CFALRGSH-------LFSASG---------GKISIFSLETFQTLATFANPPPIA 548
+++S CF H F+A+G G + F L ++ TF +P P
Sbjct: 398 NTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLHRYRNFRTFTSPRP-- 455
Query: 549 TYFILLPQD----LFAFGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVS 603
T F + D + + G DS I V T + L GH+ I+ L ++ ++L S
Sbjct: 456 TQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLSGHEGPISGLCFNPMKSILAS 515
Query: 604 SGADAQLCVWD 614
+ D +WD
Sbjct: 516 ASWDKTERLWD 526
>sp|Q8BUB4|WDFY2_MOUSE WD repeat and FYVE domain-containing protein 2 OS=Mus musculus
GN=Wdfy2 PE=2 SV=2
Length = 400
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 5/108 (4%)
Query: 512 FALRGSHLFSAS-GGKISIFSLE--TFQTLATFANPPPIATYFILLP--QDLFAFGFDDS 566
F + H+F G+++I LE L +F T P + LF+ D S
Sbjct: 163 FDVETRHVFIGDHSGQVTILKLEQENCTLLTSFRGHTGGVTALCWDPVQRVLFSGSSDHS 222
Query: 567 SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 614
I+ K T +L+GH +++ L+Y+ L+S G D + VW+
Sbjct: 223 VIMWDIGGRKGTAIELQGHNDKVQALSYAQHTRQLISCGGDGGIVVWN 270
>sp|Q9AUR7|COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza sativa subsp. japonica
GN=Os03g0711500 PE=2 SV=1
Length = 1218
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 32/188 (17%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 499
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHECPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 500 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 551
DI+A P D I + LF + + LE +A+ P
Sbjct: 161 VWDISALRKKSVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 552 ILLPQDLFAFGFDDSSILVHCPCTKKTKA----KLKGHQNRITCLAYSLSLNVLVSSGAD 607
LP L G DD + + TKA L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKIWR--MNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSED 269
Query: 608 AQLCVWDA 615
+ +WDA
Sbjct: 270 KSIRIWDA 277
>sp|Q0J3D9|COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza sativa subsp. japonica
GN=Os09g0127800 PE=2 SV=1
Length = 1218
Score = 41.2 bits (95), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 28/186 (15%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 499
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 500 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 551
DI A P D I + LF + + LE +A+ P
Sbjct: 161 VWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 552 ILLPQDLFAFGFDDSSI-LVHCPCTKKTKA-KLKGHQNRITCLAYSLSLNVLVSSGADAQ 609
LP L G DD + L TK + L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
Query: 610 LCVWDA 615
+ VWDA
Sbjct: 272 IRVWDA 277
>sp|Q9C270|PWP2_NEUCR Periodic tryptophan protein 2 homolog OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=B18D24.40 PE=3 SV=1
Length = 899
Score = 41.2 bits (95), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 467 LWKWQSNKQSLEEEN--VNMESQLYQPSSKLVMTNDIAADPKDSI--------------- 509
+W+WQS L+++ +M S +Y P + ++T +A D K +
Sbjct: 323 VWEWQSESYILKQQGHFDSMNSLVYSPDGQRIVT--VADDGKIKVWDTESGFCIVTFTEH 380
Query: 510 -----SC-FALRGSHLFSAS-GGKISIFSLETFQTLATFANPPPIATYFILL--PQDLFA 560
+C F+ +G+ LF++S G I + L ++ TF P ++ + + ++ A
Sbjct: 381 TSGITACEFSKKGNVLFTSSLDGSIRAWDLIRYRNFRTFTAPERLSFSCMAVDPSGEIVA 440
Query: 561 FGFDDS-SILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVW 613
G DS I + T + +L GH+ ++ LA++ + +LVS D +W
Sbjct: 441 AGSVDSFDIHIWSVQTGQLLDRLSGHEGPVSSLAFAPNGGLLVSGSWDRTARIW 494
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 40.8 bits (94), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 516 GSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD-LFAFGFDDSSILVHCP 573
GS L S S + + ++ + + + L TF + P + A G D ++ +
Sbjct: 1212 GSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDI 1271
Query: 574 CTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGL 633
+ K +GH N + +A++ ++L S D + +W+ SK LH+FQ
Sbjct: 1272 SSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEIS-----SSKCLHTFQ--- 1323
Query: 634 VPETTIVNHIQFHPDQIHLLSIHEGQ 659
T+ V+ + F PD L S + Q
Sbjct: 1324 -GHTSWVSSVTFSPDGTMLASGSDDQ 1348
Score = 39.7 bits (91), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 80/217 (36%), Gaps = 40/217 (18%)
Query: 444 VVRLIYSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDI 501
V +++S G L + + T +LW S +L+ + S ++ P ++
Sbjct: 1035 VRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAML----- 1089
Query: 502 AADPKDSISCFALRGSHLFSASGGK---ISIFSLETFQTLATFANPPPIATYFILLPQDL 558
ASGG + ++ + + L T + + P +
Sbjct: 1090 --------------------ASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGV 1129
Query: 559 -FAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVG 617
A G D + + +KK L+GH N + +A+S L S D + +WD
Sbjct: 1130 TLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDIS- 1188
Query: 618 WKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 654
SK L+ Q T+ VN + F+PD L S
Sbjct: 1189 ----SSKCLYILQ----GHTSWVNSVVFNPDGSTLAS 1217
>sp|Q5SUS0|FBW10_MOUSE F-box/WD repeat-containing protein 10 OS=Mus musculus GN=Fbxw10
PE=2 SV=1
Length = 1030
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 506 KDSISCFALRGSHLFS-ASGGKISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFD 564
+ +I+C + + L S A G++ + +ET + L TF + PI I + +
Sbjct: 510 QGTITCLDVYKNRLVSGAKDGQVKEWDIETGKCLKTFKHKDPILAAKI--SETYIVSSCE 567
Query: 565 DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLC 622
+ V T + + L GH+ + CL ++ LVS GAD + W VG + C
Sbjct: 568 RGIVKVWHVVTAQLQKTLTGHEGAVKCLFFNEWH--LVSGGADGLVMAWSMVGKYERC 623
>sp|Q4IBR4|HIR1_GIBZE Protein HIR1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=HIR1 PE=3 SV=1
Length = 1046
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 29/119 (24%)
Query: 512 FALRGSHLFSASGGKI-SIFSLETFQTLATFAN--PPPIATYFILLPQDLFAFGFDDSSI 568
F+ G +L S + KI ++ L+ ATF PPPI +
Sbjct: 78 FSPNGRYLASGADDKIICVYHLDKNPPAATFGTNEPPPIENW------------------ 119
Query: 569 LVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLH 627
KT +L GH N + LA+S ++LVS G D+++ VW ++KL + H
Sbjct: 120 --------KTYKRLIGHDNDVQDLAWSYDSSILVSVGLDSKVVVWSGHTFEKLKTLPAH 170
>sp|Q9AUR8|COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza sativa subsp. japonica
GN=Os03g0711400 PE=2 SV=1
Length = 1218
Score = 40.4 bits (93), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 73/186 (39%), Gaps = 28/186 (15%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTN------- 499
+ H ++V+ + T ++W WQS L N + + P LV++
Sbjct: 101 FHHEYPWIVSASDDQTIRIWNWQSRTCVAVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 500 --DIAA------DPKDSISCFALRGSHLFSASGGKISIFSLETFQTLATFANPPPIATYF 551
DI A P D I + LF + + LE +A+ P
Sbjct: 161 VWDIGALRKKTVSPADDILRLTQMNTDLFGGVDAVVK-YVLEGHDRGVNWASFHPT---- 215
Query: 552 ILLPQDLFAFGFDDSSI-LVHCPCTKKTKA-KLKGHQNRITCLAYSLSLNVLVSSGADAQ 609
LP L G DD + L TK + L+GH N ++C+ + +++VS+ D
Sbjct: 216 --LP--LIVSGADDRQVKLWRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKS 271
Query: 610 LCVWDA 615
+ +WDA
Sbjct: 272 IRIWDA 277
>sp|Q12220|UTP12_YEAST U3 small nucleolar RNA-associated protein 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DIP2 PE=1
SV=1
Length = 943
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 557 DLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 616
DL A G+ D I V +K GH+ IT L + + L+S D+ + VWD V
Sbjct: 92 DLLAVGYADGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLV 151
Query: 617 G 617
G
Sbjct: 152 G 152
>sp|Q1LV15|WDR69_DANRE Outer row dynein assembly protein 16 homolog OS=Danio rerio
GN=wdr69 PE=2 SV=2
Length = 415
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 27/180 (15%)
Query: 453 GDFLVALTQTATHKLWKWQSNK--QSLEEENVNMESQLYQPSSKLVMTNDIAADPKDSIS 510
GD + + T KLW ++ K + + + P S LV T + K
Sbjct: 147 GDKVATGSFDKTCKLWSAETGKCFYTFRGHTAEIVCLAFNPQSTLVATGSMDTTAK---- 202
Query: 511 CFALRGSHLFSASGGKISIFSLETFQTLATFAN--PPPIATYFILLPQDLFAFGFDDSSI 568
++ +E+ + ++T A I+ F L FD ++I
Sbjct: 203 ------------------LWDVESGEEVSTLAGHFAEIISLCFNTTGDRLVTGSFDHTAI 244
Query: 569 LVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHS 628
L P +K L GH+ I+C+ ++ +++ ++ D VWDA G + L + H+
Sbjct: 245 LWDVPSGRKVHV-LSGHRGEISCVQFNWDCSLIATASLDKSCKVWDAEGGQCLATLLGHN 303
>sp|Q8VDD9|PHIP_MOUSE PH-interacting protein OS=Mus musculus GN=Phip PE=1 SV=2
Length = 1821
Score = 40.4 bits (93), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 508 SISC--FALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGF 563
S+ C F G +F+ S + I++ + + LAT + I+ + + A G
Sbjct: 185 SVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGS 244
Query: 564 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLC--VWDA-- 615
D I V C T A L+GH IT L +S S L S+GAD +C +WDA
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGT 304
Query: 616 ---------------VGWKKLCSKFLHSFQTGLVPETTIVNHI-------QFHPDQIHLL 653
G + +CS F G+ T +HI P++I L
Sbjct: 305 LKINPRPTKFTERPRPGVQMICSSFSAG---GMFLATGSTDHIIRVYFFGSGQPEKISEL 361
Query: 654 SIHEGQID 661
H ++D
Sbjct: 362 EFHTDKVD 369
>sp|Q8WWQ0|PHIP_HUMAN PH-interacting protein OS=Homo sapiens GN=PHIP PE=1 SV=2
Length = 1821
Score = 40.0 bits (92), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 508 SISC--FALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGF 563
S+ C F G +F+ S + I++ + + LAT + I+ + + A G
Sbjct: 185 SVYCVTFDRTGRRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMAVNYENTMIAAGS 244
Query: 564 DDSSILVHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLC--VWDA-- 615
D I V C T A L+GH IT L +S S L S+GAD +C +WDA
Sbjct: 245 CDKMIRVWCLRTCAPLAVLQGHSASITSLQFSPLCSGSKRYLSSTGADGTICFWLWDAGT 304
Query: 616 ---------------VGWKKLCSKFLHSFQTGLVPETTIVNHI-------QFHPDQIHLL 653
G + +CS F G+ T +HI P++I L
Sbjct: 305 LKINPRPAKFTERPRPGVQMICSSFSAG---GMFLATGSTDHIIRVYFFGSGQPEKISEL 361
Query: 654 SIHEGQID 661
H ++D
Sbjct: 362 EFHTDKVD 369
>sp|P25635|PWP2_YEAST Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
Length = 923
Score = 40.0 bits (92), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 8/112 (7%)
Query: 512 FALRGSHLFSAS-GGKISIFSLETFQTLATFANPPPIATYFILLPQD-----LFAFGFDD 565
FA RG +FS+S G + + L ++ TF I F L D + A D+
Sbjct: 395 FAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTERIQ--FNCLAVDPSGEVVCAGSLDN 452
Query: 566 SSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVG 617
I V T + L GH+ ++CL++S +VL S+ D + +W G
Sbjct: 453 FDIHVWSVQTGQLLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFG 504
>sp|Q9UNX4|WDR3_HUMAN WD repeat-containing protein 3 OS=Homo sapiens GN=WDR3 PE=1 SV=1
Length = 943
Score = 39.7 bits (91), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Query: 506 KDSISCFALRGSHLFSASG---GKISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAF 561
K ++C L A G G I IFSL + + TF + I T A
Sbjct: 65 KQEVTCLCPSPDGLHLAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLAS 124
Query: 562 GFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWD 614
G D+ I+V + +LKGH++ IT + N+LV+SG D + WD
Sbjct: 125 GSKDTDIIVWDVINESGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWD 177
Score = 36.2 bits (82), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 559 FAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAV 616
A G++D SI + + + GH+ IT L Y L S D + VWD +
Sbjct: 80 LAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVI 137
>sp|Q7K0L4|WDR26_DROME WD repeat-containing protein 26 homolog OS=Drosophila melanogaster
GN=CG7611 PE=1 SV=1
Length = 630
Score = 39.7 bits (91), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Query: 193 ETKEELIYLIHQFLNEEEFKETLHKLEQETRVFFD---INYFREYITSGEWDNAEKYLSA 249
++ +E+I LI Q+L++ +++ L E+ + + FRE++ G+W A+ L
Sbjct: 95 KSNQEIIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKD 154
Query: 250 FTNMNDNTYSAKMFSQ---IQRQKYLEAVDRQQKLPSDFAERAHL 291
+ DN A + + QKYLE +D L + R+ L
Sbjct: 155 LEPLIDNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSEL 199
Score = 37.4 bits (85), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 16 LITLIMKFLEEENFKESLQALEQESKIFF---NVHRFGEIVMNGEWEKAEKYLSAFTKLD 72
+I LI ++L + +S+Q L ES + + +F E V+ G+W KA+ L L
Sbjct: 100 IIRLIGQYLHDVGLDKSVQTLMLESGCYLEHPSATKFREHVLMGDWSKADSDLKDLEPLI 159
Query: 73 DSNH---SKKMFFELRKHKYCEALCRHERTEADSIFRKDLKVFSVSQNRI 119
D+ +M F L + KY E L +A + R +L + R+
Sbjct: 160 DNGKLATITEMKFILLEQKYLEHLDDGNPLDALHVLRSELTPLQHNITRV 209
>sp|Q9NSI6|BRWD1_HUMAN Bromodomain and WD repeat-containing protein 1 OS=Homo sapiens
GN=BRWD1 PE=1 SV=4
Length = 2320
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)
Query: 512 FALRGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGFDDSSIL 569
F G +F+ S + I+S + L+T + I+ + + A G D I
Sbjct: 194 FDRTGHRIFTGSDDCLVKIWSTHNGRLLSTLRGHSAEISDMAVNYENTMIAAGSCDKIIR 253
Query: 570 VHCPCTKKTKAKLKGHQNRITCLAYSL----SLNVLVSSGADAQLCVW 613
V C T A L+GH IT L +S S +VS+GAD +C W
Sbjct: 254 VWCLRTCAPVAVLQGHTGSITSLQFSPMAKGSQRYMVSTGADGTVCFW 301
>sp|Q7RZI0|HIR1_NEUCR Protein hir-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=hir-1 PE=3 SV=2
Length = 1035
Score = 39.7 bits (91), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 577 KTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLHSFQTGLVPE 636
KT +L GH N + LA+S ++LVS G D+++ VW ++KL + +H
Sbjct: 122 KTYKRLVGHDNDVQDLAWSPDNSLLVSVGLDSKIVVWSGHTFEKLKTLAVHQSH------ 175
Query: 637 TTIVNHIQFHPDQIHLLSIHEGQ---IDVYEAPTLNHTSQVLLISHIMFVQIVVKF 689
V I F P + + + I Y AP N T ++ + I+ I V F
Sbjct: 176 ---VKGITFDPANKFFATASDDRTIKIFRYTAPAPNATQHDMVNNFILETSISVPF 228
>sp|Q6TNS2|PK1IP_DANRE p21-activated protein kinase-interacting protein 1-like OS=Danio
rerio GN=pak1ip1 PE=2 SV=1
Length = 368
Score = 39.3 bits (90), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 59/153 (38%), Gaps = 18/153 (11%)
Query: 511 CFALRGSHLFSASG-------GKISIFSLETFQTLATFANPPPIATYFILLPQDLF-AFG 562
CF + G H+ +G G + E + TF + A+ + + F A G
Sbjct: 4 CFTVMGDHIELVAGCYEQIVFGYRVCPADEEWTIEPTFTHHAHTASLNAVSSSNQFIATG 63
Query: 563 FDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLC 622
D +I ++ C K L H I+CL + + L+S G D +CVW W+ L
Sbjct: 64 SKDETIQLYDMCKKTEHGALLHHDGTISCLEF-YGTSHLLSGGQDGLICVWSTKKWECLK 122
Query: 623 SKFLHSFQTGLVPETTIVNHIQFHPDQIHLLSI 655
+ H Q V + HP LS+
Sbjct: 123 TIRAHKGQ---------VTSLSVHPSGKLALSV 146
Score = 36.6 bits (83), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 526 KISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGH 585
K+ I++L++ + T A I+ L L A G DD S+ ++ ++K + K H
Sbjct: 191 KVDIYTLDSATIIGTIAFTKRISC-LKFLKNSLLAVGGDDESVRIYDVTSQKCVCEFKAH 249
Query: 586 QNRITCLAYSLS--LNVLVSSGADAQLCVW 613
+NR+ + + VLV++ D + +W
Sbjct: 250 ENRVKAIESFMKDDFCVLVTASNDGFIKLW 279
>sp|Q2UBU2|HIR1_ASPOR Protein HIR1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=HIR1 PE=3 SV=1
Length = 1058
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 23/117 (19%)
Query: 512 FALRGSHLFSASGGKI-SIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFDDSSILV 570
F+ G +L S + KI I++L+T NPP AT FG +++ +
Sbjct: 79 FSPNGKYLASGADDKIVCIYTLDT--------NPPSHAT----------TFGSNEAPPVE 120
Query: 571 HCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCSKFLH 627
+ +T +L GH N + L +S ++LVS G D+++ VW ++KL + +H
Sbjct: 121 NW----RTVRRLIGHDNDVQDLGWSYDSSILVSVGLDSKVVVWSGHTFEKLKTISIH 173
>sp|Q6NZH4|LIS1_XENTR Lissencephaly-1 homolog OS=Xenopus tropicalis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 56/230 (24%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDS 508
+ HSG L + + T KLW +Q E M + SS +M N
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGF-----ECIRTMHGHDHNVSSVAIMPN--------- 203
Query: 509 ISCFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDD 565
G H+ SAS K I ++ ++T + TF + QD L A +D
Sbjct: 204 -------GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 566 SSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNV--------------------LVSSG 605
++ V TK+ KA+L+ H++ + C++++ + L+S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKKSGKPGPFLLSGS 315
Query: 606 ADAQLCVWD-AVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 654
D + +WD ++G +C LV V +QFHP +LS
Sbjct: 316 RDKTIKMWDISIG---MC-------LMTLVGHDNWVRGVQFHPGGKFILS 355
>sp|Q6P5M2|WDR61_DANRE WD repeat-containing protein 61 OS=Danio rerio GN=wdr61 PE=2 SV=1
Length = 305
Score = 39.3 bits (90), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 23/194 (11%)
Query: 444 VVRLIYSHSGDFLVALTQTATHKLWKWQSNKQ--SLEEENVNMESQLYQPSSKLVMT--- 498
VV + S +G + + A +LW ++ KQ S++ V+ + + P SK + T
Sbjct: 67 VVSVNISQNGAIAASSSLDAHIRLWDLETGKQIKSMDAGPVDAWTVAFSPDSKYIATGSH 126
Query: 499 ----NDIAADPKDSISCFALRGSHLFS----------ASG---GKISIFSLETFQTLATF 541
N + RG + S ASG G I+IF + T + L T
Sbjct: 127 LGKVNIFGVESGKKEHSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTL 186
Query: 542 -ANPPPIATYFILLPQDLFAFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNV 600
+ PI + L DD I ++ L GH + + +A+S
Sbjct: 187 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLSVAFSPDDTH 246
Query: 601 LVSSGADAQLCVWD 614
VSS +D + VWD
Sbjct: 247 FVSSSSDKSIKVWD 260
>sp|Q90ZL4|LIS1_XENLA Lissencephaly-1 homolog OS=Xenopus laevis GN=pafah1b1 PE=2 SV=3
Length = 410
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 89/230 (38%), Gaps = 56/230 (24%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDS 508
+ HSG L + + T KLW +Q E M + SS +M N
Sbjct: 158 FDHSGKLLASCSADMTIKLWDFQGF-----ECLRTMHGHDHNVSSVAIMPN--------- 203
Query: 509 ISCFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDD 565
G H+ SAS K I ++ ++T + TF + QD L A +D
Sbjct: 204 -------GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 566 SSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNV--------------------LVSSG 605
++ V TK+ KA+L+ H++ + C++++ + L+S
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWAPESSYSTISDATGSETKRSGKPGPFLLSGS 315
Query: 606 ADAQLCVWD-AVGWKKLCSKFLHSFQTGLVPETTIVNHIQFHPDQIHLLS 654
D + +WD ++G +C LV V +QFHP +LS
Sbjct: 316 RDKTIKMWDISIG---MC-------LMTLVGHDNWVRGVQFHPGGKFILS 355
>sp|P41811|COPB2_YEAST Coatomer subunit beta' OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC27 PE=1 SV=1
Length = 889
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 79/180 (43%), Gaps = 23/180 (12%)
Query: 445 VRLIYSH-SGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAA 503
+R I H + ++++ + T KLW W++N +LE Q ++ VM +A
Sbjct: 100 IRSIAVHPTKPYVLSGSDDLTVKLWNWENN-WALE--------QTFEGHEHFVMC--VAF 148
Query: 504 DPKDSISCFAL----RGSHLFSASGGKISIFSLETFQTLATFANPPPIATYFILLPQDLF 559
+PKD S FA R ++S G F+L T Q Y+ L +
Sbjct: 149 NPKDP-STFASGCLDRTVKVWSL-GQSTPNFTLTTGQERGV-----NYVDYYPLPDKPYM 201
Query: 560 AFGFDDSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWK 619
DD +I + TK A L+GH + ++ + +L +++S D L +W++ +K
Sbjct: 202 ITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261
>sp|Q54ZP5|WDR48_DICDI WD repeat-containing protein 48 homolog OS=Dictyostelium discoideum
GN=DDB_G0277533 PE=3 SV=1
Length = 1172
Score = 38.9 bits (89), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 13/68 (19%)
Query: 557 DLFAFGFDDSSILVHCPCTKKTKA----------KLKGHQNRITCLAYSLSLNVLVSSGA 606
DLF F+DS+ILV C K LK H + + LAY+ N SSG
Sbjct: 215 DLF---FNDSNILVSCSSDSTIKIWNTDSERCVNSLKFHDDYVKVLAYAPKANYFASSGL 271
Query: 607 DAQLCVWD 614
D+ + +WD
Sbjct: 272 DSHIKIWD 279
>sp|A2AHJ4|BRWD3_MOUSE Bromodomain and WD repeat-containing protein 3 OS=Mus musculus
GN=Brwd3 PE=2 SV=1
Length = 1799
Score = 38.5 bits (88), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 508 SISCFAL--RGSHLFSASGG-KISIFSLETFQTLATF-ANPPPIATYFILLPQDLFAFGF 563
S+ C A G +F+ S + I++ + + LAT + I+ + L A G
Sbjct: 182 SVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAVNYENTLIAAGS 241
Query: 564 DDSSILVHCPCTKKTKAKLKGHQNRIT----CLAYSLSLNVLVSSGADAQLCVW 613
D + V C T A L+GH IT C + + L S+GAD +C W
Sbjct: 242 CDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTTRYLTSTGADGTICFW 295
>sp|Q8HXX0|LIS1_MACFA Platelet-activating factor acetylhydrolase IB subunit alpha
OS=Macaca fascicularis GN=PAFAH1B1 PE=2 SV=3
Length = 410
Score = 38.5 bits (88), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 25/150 (16%)
Query: 449 YSHSGDFLVALTQTATHKLWKWQSNKQSLEEENVNMESQLYQPSSKLVMTNDIAADPKDS 508
+ HSG L + + T KLW +Q E M + SS +M N
Sbjct: 158 FDHSGKLLTSCSADMTIKLWDFQGF-----ECIRTMHGHDHNVSSVAIMPN--------- 203
Query: 509 ISCFALRGSHLFSASGGK-ISIFSLETFQTLATFANPPPIATYFILLPQD--LFAFGFDD 565
G HL SAS K I ++ ++T + TF + QD L A +D
Sbjct: 204 -------GDHLVSASRDKTIKMWEVQTGYCVKTFTGHREWVR-MVRPNQDGTLIASCSND 255
Query: 566 SSILVHCPCTKKTKAKLKGHQNRITCLAYS 595
++ V TK+ KA+L+ H++ + C++++
Sbjct: 256 QTVRVWVVATKECKAELREHEHVVECISWA 285
>sp|Q10051|PRP19_CAEEL Pre-mRNA-processing factor 19 homolog OS=Caenorhabditis elegans
GN=T10F2.4 PE=3 SV=2
Length = 492
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 508 SISCFALRGSHLFSASGG---KISIFSLETFQTLATFANPPPIATYFILLPQDLFAFGFD 564
I+ ++G+ S +GG + ++ E Q + TF +L P ++ A
Sbjct: 213 GITALDIKGN--LSLTGGIDKTVVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISAS 270
Query: 565 -DSSILVHCPCTKKTKAKLKGHQNRITCLAYSLSLNVLVSSGADAQLCVWDAVGWKKLCS 623
DS I V +KA + HQ +T ++ + S + ++S+ D+ D K LC
Sbjct: 271 ADSHIRVWSATDSSSKAIIDVHQAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLC- 329
Query: 624 KFLHSFQTGLVPETTIVNH-IQFHPDQI 650
+ + P + I H I+FHPD +
Sbjct: 330 ------KVSVEPGSQIAVHSIEFHPDGL 351
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 247,754,339
Number of Sequences: 539616
Number of extensions: 10157290
Number of successful extensions: 37592
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 221
Number of HSP's that attempted gapping in prelim test: 36644
Number of HSP's gapped (non-prelim): 1120
length of query: 701
length of database: 191,569,459
effective HSP length: 125
effective length of query: 576
effective length of database: 124,117,459
effective search space: 71491656384
effective search space used: 71491656384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)