Query 005343
Match_columns 701
No_of_seqs 539 out of 3988
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 21:58:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005343.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/005343hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 1.7E-49 3.6E-54 429.4 24.1 268 380-655 61-346 (361)
2 KOG0615 Serine/threonine prote 100.0 3.3E-47 7.1E-52 394.1 15.9 256 392-665 170-445 (475)
3 KOG0581 Mitogen-activated prot 100.0 7.8E-47 1.7E-51 389.2 17.1 248 397-664 82-342 (364)
4 KOG0575 Polo-like serine/threo 100.0 9.2E-46 2E-50 401.1 21.4 247 394-661 18-273 (592)
5 KOG0192 Tyrosine kinase specif 100.0 3.7E-45 8E-50 393.3 24.3 244 396-656 43-298 (362)
6 KOG0595 Serine/threonine-prote 100.0 2.9E-45 6.4E-50 380.3 18.3 252 392-662 8-273 (429)
7 KOG0591 NIMA (never in mitosis 100.0 1.4E-45 3.1E-50 364.9 11.4 249 394-656 19-280 (375)
8 KOG0605 NDR and related serine 100.0 1.2E-43 2.7E-48 378.9 25.0 260 392-665 139-453 (550)
9 KOG0598 Ribosomal protein S6 k 100.0 1.5E-44 3.2E-49 372.4 17.0 253 392-664 23-288 (357)
10 KOG0593 Predicted protein kina 100.0 5.4E-44 1.2E-48 356.9 14.9 255 394-660 2-287 (396)
11 KOG0600 Cdc2-related protein k 100.0 1.1E-43 2.4E-48 376.1 15.8 255 394-661 117-404 (560)
12 KOG0616 cAMP-dependent protein 100.0 6.9E-43 1.5E-47 348.5 15.9 248 394-665 44-305 (355)
13 KOG0659 Cdk activating kinase 100.0 1.7E-42 3.7E-47 341.2 18.3 255 394-662 2-286 (318)
14 KOG0592 3-phosphoinositide-dep 100.0 2.7E-43 5.8E-48 375.9 13.7 261 393-666 72-347 (604)
15 KOG0198 MEKK and related serin 100.0 1.5E-42 3.2E-47 363.0 17.2 259 394-665 17-284 (313)
16 KOG0578 p21-activated serine/t 100.0 2.8E-42 6.1E-47 371.3 17.0 255 393-664 272-530 (550)
17 KOG0661 MAPK related serine/th 100.0 1E-42 2.2E-47 366.3 13.0 260 392-666 8-300 (538)
18 KOG0197 Tyrosine kinases [Sign 100.0 4.1E-42 8.9E-47 369.4 17.3 242 395-654 207-454 (468)
19 KOG0583 Serine/threonine prote 100.0 3.7E-41 8E-46 365.2 22.1 251 392-663 15-281 (370)
20 KOG0663 Protein kinase PITSLRE 100.0 5E-42 1.1E-46 346.9 14.2 256 393-662 75-366 (419)
21 KOG0597 Serine-threonine prote 100.0 9.3E-42 2E-46 363.6 15.3 249 394-662 2-256 (808)
22 KOG0582 Ste20-like serine/thre 100.0 9.3E-41 2E-45 349.1 22.0 266 393-664 25-300 (516)
23 KOG0694 Serine/threonine prote 100.0 4.1E-41 8.9E-46 368.6 17.5 252 392-665 366-632 (694)
24 KOG0580 Serine/threonine prote 100.0 6.6E-42 1.4E-46 332.7 9.7 249 393-662 21-278 (281)
25 cd05612 STKc_PRKX_like Catalyt 100.0 9.8E-41 2.1E-45 352.7 16.5 247 394-664 1-261 (291)
26 cd05631 STKc_GRK4 Catalytic do 100.0 3.7E-40 8.1E-45 347.0 20.3 252 395-662 1-266 (285)
27 KOG0588 Serine/threonine prote 100.0 1.3E-40 2.8E-45 361.7 16.8 247 394-662 12-268 (786)
28 KOG1151 Tousled-like protein k 100.0 2E-39 4.2E-44 336.6 24.1 265 391-662 460-746 (775)
29 KOG0201 Serine/threonine prote 100.0 4E-41 8.6E-46 351.9 11.5 251 394-662 13-268 (467)
30 KOG4721 Serine/threonine prote 100.0 2.5E-41 5.4E-46 359.8 9.1 235 398-658 128-365 (904)
31 PTZ00263 protein kinase A cata 100.0 3.1E-40 6.7E-45 355.3 17.7 245 394-662 18-276 (329)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.6E-40 1.9E-44 352.6 19.8 250 392-656 5-329 (338)
33 KOG0585 Ca2+/calmodulin-depend 100.0 9.8E-40 2.1E-44 343.2 19.3 255 392-661 95-376 (576)
34 cd06649 PKc_MEK2 Catalytic dom 100.0 2.2E-39 4.7E-44 349.0 22.2 260 393-666 4-310 (331)
35 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.5E-40 1.2E-44 353.7 17.5 253 394-662 1-262 (333)
36 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.5E-39 5.4E-44 343.6 22.2 257 393-661 4-292 (303)
37 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.5E-39 5.5E-44 348.2 22.3 258 395-662 1-295 (338)
38 cd05571 STKc_PKB Catalytic dom 100.0 3.2E-40 7E-45 354.2 14.2 242 400-662 1-256 (323)
39 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-39 3E-44 335.4 18.2 257 394-662 11-307 (323)
40 cd07848 STKc_CDKL5 Catalytic d 100.0 1.9E-39 4E-44 341.2 19.6 256 394-660 1-287 (287)
41 PHA02988 hypothetical protein; 100.0 4.7E-39 1E-43 338.8 22.2 240 400-662 26-279 (283)
42 PTZ00426 cAMP-dependent protei 100.0 5.8E-40 1.3E-44 354.9 15.1 246 393-662 29-289 (340)
43 KOG0658 Glycogen synthase kina 100.0 1.7E-39 3.6E-44 334.2 17.6 272 395-685 25-330 (364)
44 cd07862 STKc_CDK6 Catalytic do 100.0 3.5E-39 7.5E-44 339.6 20.1 254 395-660 2-290 (290)
45 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.7E-39 1E-43 339.2 21.1 255 394-660 5-288 (288)
46 KOG0660 Mitogen-activated prot 100.0 5E-40 1.1E-44 337.5 13.0 260 392-662 20-315 (359)
47 PTZ00267 NIMA-related protein 100.0 7.7E-39 1.7E-43 361.6 23.7 253 395-662 68-328 (478)
48 KOG0611 Predicted serine/threo 100.0 1.1E-39 2.4E-44 335.6 15.1 247 393-662 52-308 (668)
49 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-39 3.3E-44 349.0 15.9 241 400-661 1-255 (323)
50 cd05585 STKc_YPK1_like Catalyt 100.0 2.8E-39 6.1E-44 345.1 17.7 240 402-662 1-252 (312)
51 cd05108 PTKc_EGFR Catalytic do 100.0 2E-38 4.3E-43 338.9 24.2 279 394-690 7-296 (316)
52 cd05599 STKc_NDR_like Catalyti 100.0 1.9E-39 4.2E-44 353.6 16.6 257 394-662 1-301 (364)
53 cd05573 STKc_ROCK_NDR_like Cat 100.0 3E-39 6.4E-44 349.8 17.3 258 394-662 1-290 (350)
54 PLN00034 mitogen-activated pro 100.0 4E-39 8.6E-44 350.0 18.3 248 396-664 76-335 (353)
55 cd05593 STKc_PKB_gamma Catalyt 100.0 2.4E-39 5.2E-44 348.3 15.8 241 400-661 1-255 (328)
56 KOG0589 Serine/threonine prote 100.0 2.2E-39 4.8E-44 347.3 15.4 252 394-661 4-262 (426)
57 PTZ00283 serine/threonine prot 100.0 1.9E-38 4.2E-43 359.3 23.9 259 389-662 27-302 (496)
58 KOG0193 Serine/threonine prote 100.0 1.2E-39 2.7E-44 351.6 13.4 264 387-663 385-655 (678)
59 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-38 2.4E-43 335.8 19.7 255 395-665 1-269 (285)
60 cd05628 STKc_NDR1 Catalytic do 100.0 1.4E-38 3E-43 347.1 21.0 258 394-662 1-298 (363)
61 cd05096 PTKc_DDR1 Catalytic do 100.0 1.9E-38 4.1E-43 336.9 21.4 255 393-655 4-299 (304)
62 cd05598 STKc_LATS Catalytic do 100.0 6.4E-39 1.4E-43 351.3 18.4 260 394-664 1-308 (376)
63 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-38 3E-43 349.5 20.9 259 395-662 2-310 (381)
64 cd05625 STKc_LATS1 Catalytic d 100.0 7.2E-39 1.6E-43 351.7 18.5 260 395-665 2-313 (382)
65 PTZ00036 glycogen synthase kin 100.0 2.1E-38 4.5E-43 354.4 22.0 255 393-662 65-356 (440)
66 cd06650 PKc_MEK1 Catalytic dom 100.0 3.2E-38 7E-43 340.3 22.6 258 393-664 4-306 (333)
67 cd05629 STKc_NDR_like_fungal C 100.0 8.5E-39 1.9E-43 350.5 18.2 258 394-661 1-309 (377)
68 KOG1026 Nerve growth factor re 100.0 2.1E-39 4.5E-44 363.9 13.6 247 393-655 485-756 (774)
69 PHA03212 serine/threonine kina 100.0 3.3E-38 7.2E-43 347.4 22.8 251 393-661 91-380 (391)
70 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-39 4.4E-44 348.2 12.8 241 400-661 1-256 (325)
71 cd05587 STKc_cPKC Catalytic do 100.0 2.1E-38 4.5E-43 340.2 19.8 247 395-662 1-262 (324)
72 cd05614 STKc_MSK2_N N-terminal 100.0 1.8E-38 3.9E-43 341.7 19.0 248 395-662 1-272 (332)
73 cd05589 STKc_PKN Catalytic dom 100.0 1.8E-38 4E-43 340.6 18.9 245 396-662 1-262 (324)
74 cd05608 STKc_GRK1 Catalytic do 100.0 2.6E-38 5.6E-43 332.2 19.6 247 402-662 1-262 (280)
75 cd05590 STKc_nPKC_eta Catalyti 100.0 8.3E-39 1.8E-43 342.9 16.0 242 400-662 1-258 (320)
76 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-38 2.8E-43 341.7 17.4 242 400-662 2-261 (323)
77 cd07876 STKc_JNK2 Catalytic do 100.0 6.8E-38 1.5E-42 341.0 23.3 255 392-662 19-320 (359)
78 cd07863 STKc_CDK4 Catalytic do 100.0 6E-38 1.3E-42 329.7 21.3 254 395-660 1-288 (288)
79 PTZ00284 protein kinase; Provi 100.0 3.7E-38 8.1E-43 355.2 20.8 257 389-662 124-443 (467)
80 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-38 3.4E-43 341.0 16.7 247 395-662 1-262 (323)
81 cd05596 STKc_ROCK Catalytic do 100.0 2E-38 4.4E-43 346.8 17.7 254 392-662 41-309 (370)
82 cd05592 STKc_nPKC_theta_delta 100.0 3.2E-38 7E-43 337.7 18.5 242 400-662 1-253 (316)
83 cd05591 STKc_nPKC_epsilon Cata 100.0 2.4E-38 5.1E-43 339.3 17.2 242 400-662 1-259 (321)
84 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-37 2.6E-42 323.4 21.9 254 395-660 1-267 (267)
85 cd05618 STKc_aPKC_iota Catalyt 100.0 2.3E-38 5E-43 340.8 16.8 243 400-663 1-268 (329)
86 cd07853 STKc_NLK Catalytic dom 100.0 7E-38 1.5E-42 342.6 20.7 256 395-662 1-293 (372)
87 cd07874 STKc_JNK3 Catalytic do 100.0 8.6E-38 1.9E-42 339.6 21.2 255 392-662 15-316 (355)
88 KOG0032 Ca2+/calmodulin-depend 100.0 9E-38 1.9E-42 338.8 21.2 251 392-661 33-297 (382)
89 cd07861 STKc_CDK1_euk Catalyti 100.0 1.1E-37 2.4E-42 326.8 21.2 256 395-660 1-285 (285)
90 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-37 2.7E-42 331.6 21.8 257 394-662 6-291 (309)
91 cd05601 STKc_CRIK Catalytic do 100.0 2.1E-38 4.5E-43 340.9 15.9 255 394-662 1-268 (330)
92 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-37 2.4E-42 326.8 21.0 249 394-657 5-279 (283)
93 cd05104 PTKc_Kit Catalytic dom 100.0 9.6E-38 2.1E-42 342.1 21.2 251 392-657 33-370 (375)
94 cd07875 STKc_JNK1 Catalytic do 100.0 1.4E-37 3E-42 339.2 22.3 254 392-661 22-322 (364)
95 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-37 4.1E-42 321.0 22.2 253 394-660 2-263 (263)
96 KOG0599 Phosphorylase kinase g 100.0 2E-38 4.4E-43 312.4 14.1 253 394-664 17-290 (411)
97 cd05588 STKc_aPKC Catalytic do 100.0 1.1E-38 2.3E-43 343.3 13.3 242 400-662 1-267 (329)
98 cd05619 STKc_nPKC_theta Cataly 100.0 3.7E-38 8.1E-43 337.3 17.4 244 400-664 1-255 (316)
99 cd06637 STKc_TNIK Catalytic do 100.0 7.2E-38 1.6E-42 326.0 18.9 254 391-660 3-272 (272)
100 KOG0033 Ca2+/calmodulin-depend 100.0 1.6E-39 3.6E-44 315.9 6.1 254 393-664 10-274 (355)
101 cd05621 STKc_ROCK2 Catalytic d 100.0 7.8E-38 1.7E-42 342.1 20.0 252 392-662 41-309 (370)
102 cd05620 STKc_nPKC_delta Cataly 100.0 2.3E-38 5E-43 338.8 15.5 244 400-664 1-255 (316)
103 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-37 5.7E-42 327.3 23.3 254 393-663 19-276 (296)
104 cd06631 STKc_YSK4 Catalytic do 100.0 3.1E-37 6.8E-42 320.2 23.4 256 395-660 1-265 (265)
105 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-37 4.1E-42 326.5 22.1 255 395-665 1-269 (285)
106 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.7E-37 6E-42 319.2 22.7 244 394-656 4-253 (256)
107 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.1E-37 4.5E-42 322.5 21.7 246 393-656 4-260 (266)
108 cd05570 STKc_PKC Catalytic dom 100.0 2.8E-38 6E-43 338.5 15.3 243 400-663 1-258 (318)
109 cd06655 STKc_PAK2 Catalytic do 100.0 4.7E-37 1E-41 325.5 24.6 255 393-664 18-276 (296)
110 cd05062 PTKc_IGF-1R Catalytic 100.0 1.8E-37 3.9E-42 324.6 20.8 251 392-657 4-274 (277)
111 cd06646 STKc_MAP4K5 Catalytic 100.0 1.5E-37 3.2E-42 323.1 19.9 251 393-659 8-267 (267)
112 cd08529 STKc_FA2-like Catalyti 100.0 3.8E-37 8.1E-42 317.2 22.7 247 395-659 1-255 (256)
113 KOG0610 Putative serine/threon 100.0 8.3E-38 1.8E-42 324.8 17.8 264 393-665 76-400 (459)
114 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-37 2.9E-42 326.4 19.6 251 396-663 7-268 (282)
115 cd05607 STKc_GRK7 Catalytic do 100.0 2.1E-37 4.6E-42 324.7 21.0 246 402-662 1-259 (277)
116 cd06613 STKc_MAP4K3_like Catal 100.0 3.8E-37 8.2E-42 318.3 22.5 254 393-659 2-262 (262)
117 cd07868 STKc_CDK8 Catalytic do 100.0 1.4E-37 3E-42 332.0 19.8 253 399-660 6-317 (317)
118 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-37 2.6E-42 336.8 19.1 254 392-662 13-303 (343)
119 cd05627 STKc_NDR2 Catalytic do 100.0 7.5E-38 1.6E-42 340.9 17.7 257 394-662 1-298 (360)
120 KOG1989 ARK protein kinase fam 100.0 1.1E-37 2.4E-42 351.7 19.4 261 392-664 35-313 (738)
121 KOG0667 Dual-specificity tyros 100.0 1.4E-37 3.1E-42 341.0 19.7 258 393-665 185-510 (586)
122 PF07714 Pkinase_Tyr: Protein 100.0 9.7E-38 2.1E-42 324.2 17.5 244 397-656 2-257 (259)
123 PTZ00266 NIMA-related protein 100.0 2.3E-37 5E-42 362.8 22.5 261 390-663 9-301 (1021)
124 cd05582 STKc_RSK_N N-terminal 100.0 2.3E-38 5E-43 338.9 12.8 241 400-661 2-258 (318)
125 cd06645 STKc_MAP4K3 Catalytic 100.0 1.4E-37 3E-42 323.3 18.1 250 394-659 9-267 (267)
126 cd06644 STKc_STK10_LOK Catalyt 100.0 4.3E-37 9.4E-42 324.4 22.2 255 392-661 10-273 (292)
127 cd05630 STKc_GRK6 Catalytic do 100.0 1.9E-37 4.2E-42 326.5 19.4 252 395-662 1-266 (285)
128 cd05622 STKc_ROCK1 Catalytic d 100.0 1.6E-37 3.4E-42 340.0 19.1 258 388-662 37-309 (371)
129 cd06639 STKc_myosinIIIB Cataly 100.0 5.5E-37 1.2E-41 323.3 22.3 262 384-661 12-291 (291)
130 cd06656 STKc_PAK3 Catalytic do 100.0 4.4E-37 9.6E-42 325.7 21.7 253 393-662 18-274 (297)
131 cd06624 STKc_ASK Catalytic dom 100.0 3.4E-37 7.3E-42 320.7 20.4 257 390-660 4-268 (268)
132 cd05106 PTKc_CSF-1R Catalytic 100.0 2.3E-37 4.9E-42 339.0 20.0 249 392-655 36-366 (374)
133 cd07867 STKc_CDC2L6 Catalytic 100.0 3.9E-37 8.4E-42 328.2 21.2 253 399-660 6-317 (317)
134 cd05113 PTKc_Btk_Bmx Catalytic 100.0 8E-37 1.7E-41 316.3 22.7 244 394-656 4-253 (256)
135 cd08223 STKc_Nek4 Catalytic do 100.0 8.6E-37 1.9E-41 314.9 22.8 248 395-660 1-257 (257)
136 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-37 2.6E-42 334.2 17.0 241 400-661 1-255 (323)
137 cd05615 STKc_cPKC_alpha Cataly 100.0 1.1E-37 2.5E-42 334.5 16.8 247 395-662 1-262 (323)
138 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.2E-38 7E-43 339.3 12.5 242 400-662 1-265 (327)
139 cd05090 PTKc_Ror1 Catalytic do 100.0 7.3E-37 1.6E-41 321.0 22.4 248 394-656 5-278 (283)
140 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.7E-37 8.1E-42 326.5 20.3 257 394-662 6-291 (301)
141 cd06638 STKc_myosinIIIA Cataly 100.0 5.3E-37 1.1E-41 322.1 21.1 260 387-660 11-286 (286)
142 cd06611 STKc_SLK_like Catalyti 100.0 3.8E-37 8.1E-42 322.5 19.9 253 393-662 4-267 (280)
143 cd06615 PKc_MEK Catalytic doma 100.0 9E-37 2E-41 325.0 22.3 254 394-662 1-292 (308)
144 cd06619 PKc_MKK5 Catalytic dom 100.0 9.3E-37 2E-41 319.9 22.0 245 395-664 2-260 (279)
145 cd05049 PTKc_Trk Catalytic dom 100.0 5.3E-37 1.2E-41 320.9 20.1 248 394-656 5-276 (280)
146 PF00069 Pkinase: Protein kina 100.0 1.4E-37 3.1E-42 320.7 15.5 251 396-660 1-260 (260)
147 cd06612 STKc_MST1_2 Catalytic 100.0 9.3E-37 2E-41 314.2 21.4 250 394-660 3-256 (256)
148 cd06609 STKc_MST3_like Catalyt 100.0 8.3E-37 1.8E-41 318.9 21.2 249 394-662 1-256 (274)
149 cd06651 STKc_MEKK3 Catalytic d 100.0 1.2E-36 2.5E-41 316.5 22.1 253 394-661 2-265 (266)
150 cd05597 STKc_DMPK_like Catalyt 100.0 4.2E-37 9E-42 331.3 19.4 254 394-661 1-270 (331)
151 cd05072 PTKc_Lyn Catalytic dom 100.0 1.2E-36 2.7E-41 315.0 22.1 245 393-655 5-255 (261)
152 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.3E-37 1.2E-41 322.3 19.6 256 394-665 1-270 (286)
153 PHA03207 serine/threonine kina 100.0 2.5E-37 5.4E-42 340.9 17.6 254 393-662 91-380 (392)
154 cd05604 STKc_SGK3 Catalytic do 100.0 2.1E-37 4.6E-42 332.5 16.7 242 400-662 1-256 (325)
155 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.3E-37 1.1E-41 321.7 19.3 259 386-660 8-282 (282)
156 cd05105 PTKc_PDGFR_alpha Catal 100.0 1E-36 2.2E-41 336.2 22.5 250 392-656 35-392 (400)
157 cd05068 PTKc_Frk_like Catalyti 100.0 1.6E-36 3.5E-41 314.4 22.6 247 392-656 4-256 (261)
158 cd05033 PTKc_EphR Catalytic do 100.0 1.4E-36 3E-41 315.8 22.2 248 393-657 3-261 (266)
159 KOG2345 Serine/threonine prote 100.0 1.2E-37 2.6E-42 304.2 13.2 259 392-657 19-296 (302)
160 cd05093 PTKc_TrkB Catalytic do 100.0 1.1E-36 2.4E-41 320.9 21.4 253 394-662 5-279 (288)
161 cd05111 PTK_HER3 Pseudokinase 100.0 2.5E-36 5.4E-41 316.8 24.0 251 394-662 7-268 (279)
162 cd05071 PTKc_Src Catalytic dom 100.0 2.3E-36 5E-41 313.9 23.5 245 393-655 5-254 (262)
163 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.1E-36 2.5E-41 319.1 21.4 255 394-660 1-286 (286)
164 cd08227 PK_STRAD_alpha Pseudok 100.0 1.5E-36 3.3E-41 326.1 22.7 261 398-662 2-312 (327)
165 KOG0579 Ste20-like serine/thre 100.0 3.1E-38 6.7E-43 338.8 9.4 254 393-661 31-293 (1187)
166 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.2E-36 4.8E-41 313.1 23.1 245 393-655 5-254 (260)
167 cd06642 STKc_STK25-YSK1 Cataly 100.0 7.1E-37 1.5E-41 320.1 19.4 249 395-664 5-260 (277)
168 PRK13184 pknD serine/threonine 100.0 2.7E-36 5.9E-41 352.5 26.3 264 394-664 2-292 (932)
169 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-36 3.1E-41 316.3 21.3 247 396-657 1-267 (272)
170 cd05624 STKc_MRCK_beta Catalyt 100.0 4E-37 8.7E-42 331.4 17.7 255 394-662 1-271 (331)
171 cd05148 PTKc_Srm_Brk Catalytic 100.0 5.7E-37 1.2E-41 317.3 18.2 246 392-655 4-255 (261)
172 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.7E-36 3.7E-41 317.4 21.9 250 393-657 5-274 (277)
173 cd05603 STKc_SGK2 Catalytic do 100.0 1.8E-37 4E-42 332.3 14.8 241 400-661 1-255 (321)
174 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-36 4.2E-41 313.2 21.9 239 401-656 2-250 (257)
175 KOG4279 Serine/threonine prote 100.0 1.5E-37 3.3E-42 336.7 14.0 247 401-663 582-838 (1226)
176 cd05623 STKc_MRCK_alpha Cataly 100.0 6E-37 1.3E-41 330.1 18.7 254 394-661 1-270 (332)
177 PHA03211 serine/threonine kina 100.0 1.7E-36 3.7E-41 339.0 22.9 253 393-661 168-459 (461)
178 cd05109 PTKc_HER2 Catalytic do 100.0 2.7E-36 5.9E-41 316.0 23.0 252 393-662 6-268 (279)
179 cd05094 PTKc_TrkC Catalytic do 100.0 1.6E-36 3.5E-41 320.1 21.4 253 394-662 5-282 (291)
180 cd05054 PTKc_VEGFR Catalytic d 100.0 7.4E-37 1.6E-41 330.3 19.3 251 392-657 5-329 (337)
181 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-36 4.7E-41 312.7 21.9 243 395-656 5-253 (256)
182 cd05091 PTKc_Ror2 Catalytic do 100.0 9.4E-37 2E-41 320.0 19.0 247 395-656 6-278 (283)
183 cd05067 PTKc_Lck_Blk Catalytic 100.0 2.7E-36 5.9E-41 312.5 22.1 246 392-655 4-254 (260)
184 cd05052 PTKc_Abl Catalytic dom 100.0 3E-36 6.5E-41 312.9 22.4 245 394-656 6-257 (263)
185 cd05574 STKc_phototropin_like 100.0 4.1E-36 8.8E-41 320.6 24.0 260 394-662 1-294 (316)
186 cd05069 PTKc_Yes Catalytic dom 100.0 6E-36 1.3E-40 310.1 24.4 244 394-655 6-254 (260)
187 cd05032 PTKc_InsR_like Catalyt 100.0 1.5E-36 3.2E-41 317.0 20.0 249 393-656 5-273 (277)
188 cd05082 PTKc_Csk Catalytic dom 100.0 3.7E-36 7.9E-41 310.8 22.7 240 394-656 6-251 (256)
189 cd05602 STKc_SGK1 Catalytic do 100.0 5.3E-37 1.2E-41 329.4 17.0 241 400-661 1-255 (325)
190 KOG1095 Protein tyrosine kinas 100.0 9.8E-37 2.1E-41 353.8 20.3 247 393-656 691-956 (1025)
191 cd06640 STKc_MST4 Catalytic do 100.0 3.7E-36 8E-41 314.8 22.9 253 395-666 5-262 (277)
192 cd05035 PTKc_Axl_like Catalyti 100.0 3.4E-36 7.4E-41 313.1 22.3 246 396-656 1-267 (273)
193 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.9E-36 6.2E-41 312.3 21.4 259 394-660 1-267 (267)
194 cd06659 STKc_PAK6 Catalytic do 100.0 2E-36 4.3E-41 320.8 20.6 253 396-665 23-279 (297)
195 cd05092 PTKc_TrkA Catalytic do 100.0 2.1E-36 4.5E-41 317.4 20.6 248 394-656 5-276 (280)
196 cd07846 STKc_CDKL2_3 Catalytic 100.0 8.6E-37 1.9E-41 320.3 17.7 255 394-660 1-286 (286)
197 KOG0574 STE20-like serine/thre 100.0 6.8E-39 1.5E-43 319.1 1.5 249 396-661 35-287 (502)
198 cd07860 STKc_CDK2_3 Catalytic 100.0 2.1E-36 4.7E-41 317.2 20.5 255 395-660 1-284 (284)
199 cd06652 STKc_MEKK2 Catalytic d 100.0 4.8E-36 1E-40 311.5 22.9 252 394-660 2-264 (265)
200 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.4E-36 1.8E-40 313.9 25.0 255 394-661 1-270 (287)
201 cd05061 PTKc_InsR Catalytic do 100.0 2.8E-36 6.1E-41 317.7 21.3 251 391-656 3-273 (288)
202 KOG4717 Serine/threonine prote 100.0 7.3E-37 1.6E-41 322.5 16.6 253 393-664 17-277 (864)
203 cd08228 STKc_Nek6 Catalytic do 100.0 6.3E-36 1.4E-40 310.5 23.5 247 394-656 2-260 (267)
204 cd06658 STKc_PAK5 Catalytic do 100.0 1.2E-36 2.5E-41 321.9 18.2 251 395-662 23-277 (292)
205 cd06647 STKc_PAK_I Catalytic d 100.0 3.6E-36 7.7E-41 318.2 21.9 255 393-664 18-276 (293)
206 cd08219 STKc_Nek3 Catalytic do 100.0 4.3E-36 9.4E-41 309.8 22.0 244 395-656 1-251 (255)
207 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-36 6.7E-41 315.8 21.1 255 395-660 1-285 (286)
208 PHA03209 serine/threonine kina 100.0 2.1E-36 4.6E-41 329.2 20.6 249 394-661 66-355 (357)
209 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-36 5.1E-41 317.1 20.1 251 396-656 6-276 (283)
210 cd08218 STKc_Nek1 Catalytic do 100.0 3E-36 6.5E-41 311.0 20.5 248 395-660 1-256 (256)
211 cd08221 STKc_Nek9 Catalytic do 100.0 5.5E-36 1.2E-40 309.0 22.3 247 395-659 1-255 (256)
212 cd05051 PTKc_DDR Catalytic dom 100.0 4.1E-36 8.8E-41 317.0 21.7 255 393-655 4-291 (296)
213 cd07841 STKc_CDK7 Catalytic do 100.0 2.8E-36 6.1E-41 318.8 20.5 256 395-662 1-287 (298)
214 cd06623 PKc_MAPKK_plant_like C 100.0 5.8E-36 1.3E-40 309.5 22.4 252 394-662 1-261 (264)
215 cd05053 PTKc_FGFR Catalytic do 100.0 2.3E-36 4.9E-41 318.7 19.6 252 391-657 9-287 (293)
216 cd05097 PTKc_DDR_like Catalyti 100.0 2.4E-36 5.2E-41 319.4 19.8 254 394-655 5-290 (295)
217 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.4E-36 1.4E-40 310.9 22.6 234 400-657 1-260 (262)
218 cd05089 PTKc_Tie1 Catalytic do 100.0 5.4E-36 1.2E-40 317.1 22.4 246 394-657 2-271 (297)
219 cd00192 PTKc Catalytic domain 100.0 6.5E-36 1.4E-40 307.8 22.3 243 400-657 1-260 (262)
220 cd05060 PTKc_Syk_like Catalyti 100.0 4.9E-36 1.1E-40 310.0 21.4 239 400-655 1-249 (257)
221 cd06608 STKc_myosinIII_like Ca 100.0 2.8E-36 6E-41 313.5 19.6 253 392-660 4-275 (275)
222 cd05043 PTK_Ryk Pseudokinase d 100.0 4.5E-36 9.8E-41 314.3 21.3 249 392-655 4-270 (280)
223 cd08217 STKc_Nek2 Catalytic do 100.0 6.3E-36 1.4E-40 308.8 22.0 248 395-659 1-264 (265)
224 cd06632 STKc_MEKK1_plant Catal 100.0 3.7E-36 8E-41 309.9 20.1 247 395-659 1-257 (258)
225 cd07844 STKc_PCTAIRE_like Cata 100.0 4.9E-36 1.1E-40 315.8 21.5 256 393-660 4-291 (291)
226 cd07836 STKc_Pho85 Catalytic d 100.0 5.3E-36 1.2E-40 314.0 21.6 256 395-660 1-284 (284)
227 cd05115 PTKc_Zap-70 Catalytic 100.0 7.5E-36 1.6E-40 309.4 22.5 239 401-655 2-249 (257)
228 cd05039 PTKc_Csk_like Catalyti 100.0 9.1E-36 2E-40 307.6 23.0 242 393-656 5-251 (256)
229 cd05088 PTKc_Tie2 Catalytic do 100.0 4.3E-36 9.4E-41 319.1 21.1 249 394-660 7-279 (303)
230 cd05045 PTKc_RET Catalytic dom 100.0 6.8E-36 1.5E-40 314.9 22.2 247 395-656 1-281 (290)
231 cd05084 PTKc_Fes Catalytic dom 100.0 6.8E-36 1.5E-40 307.8 21.6 239 400-655 1-247 (252)
232 cd05586 STKc_Sck1_like Catalyt 100.0 4.7E-37 1E-41 330.5 13.4 241 402-662 1-258 (330)
233 cd07837 STKc_CdkB_plant Cataly 100.0 4.4E-36 9.6E-41 316.6 20.5 258 394-661 1-295 (295)
234 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 6E-36 1.3E-40 314.0 21.4 255 394-656 4-278 (284)
235 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.6E-35 3.4E-40 307.0 24.3 245 394-655 2-259 (267)
236 cd06641 STKc_MST3 Catalytic do 100.0 1.1E-35 2.5E-40 311.1 23.2 247 395-662 5-258 (277)
237 cd05040 PTKc_Ack_like Catalyti 100.0 6.1E-36 1.3E-40 308.9 20.8 243 400-656 1-253 (257)
238 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.9E-36 4.1E-41 318.2 17.3 249 394-661 5-270 (284)
239 cd07833 STKc_CDKL Catalytic do 100.0 3.7E-36 8.1E-41 315.5 19.5 256 394-660 1-288 (288)
240 cd05098 PTKc_FGFR1 Catalytic d 100.0 6.5E-36 1.4E-40 318.0 21.5 254 393-662 17-299 (307)
241 cd06617 PKc_MKK3_6 Catalytic d 100.0 7E-36 1.5E-40 312.9 21.5 253 394-664 1-268 (283)
242 cd06629 STKc_MAPKKK_Bck1_like 100.0 7.7E-36 1.7E-40 311.0 21.6 254 395-660 2-272 (272)
243 cd05056 PTKc_FAK Catalytic dom 100.0 8.1E-36 1.8E-40 310.7 21.5 246 393-656 5-260 (270)
244 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.6E-35 3.5E-40 312.1 23.9 257 392-660 3-291 (291)
245 cd06630 STKc_MEKK1 Catalytic d 100.0 2.9E-36 6.3E-41 313.0 17.9 254 395-661 1-268 (268)
246 cd05110 PTKc_HER4 Catalytic do 100.0 1.4E-35 3.1E-40 315.0 23.6 275 394-686 7-292 (303)
247 cd06917 STKc_NAK1_like Catalyt 100.0 9.4E-36 2E-40 311.1 21.7 250 395-662 2-260 (277)
248 cd05083 PTKc_Chk Catalytic dom 100.0 8.2E-36 1.8E-40 307.8 20.9 240 394-656 6-249 (254)
249 cd05580 STKc_PKA Catalytic dom 100.0 8.7E-36 1.9E-40 314.3 21.5 247 394-664 1-261 (290)
250 cd05107 PTKc_PDGFR_beta Cataly 100.0 8E-36 1.7E-40 329.1 22.0 257 389-661 32-398 (401)
251 cd06605 PKc_MAPKK Catalytic do 100.0 1.8E-36 4E-41 313.9 15.8 251 394-662 1-262 (265)
252 cd08220 STKc_Nek8 Catalytic do 100.0 8.5E-36 1.8E-40 307.1 20.5 247 395-660 1-256 (256)
253 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-35 2.9E-40 308.5 22.0 248 393-656 4-262 (268)
254 cd07835 STKc_CDK1_like Catalyt 100.0 7.2E-36 1.6E-40 313.0 20.1 254 396-660 1-283 (283)
255 cd06614 STKc_PAK Catalytic dom 100.0 1.4E-35 3E-40 311.8 22.3 253 392-662 17-275 (286)
256 cd05609 STKc_MAST Catalytic do 100.0 1.4E-35 3E-40 315.2 22.5 261 394-666 1-282 (305)
257 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.4E-35 2.9E-40 315.0 22.2 257 392-664 13-298 (304)
258 cd07839 STKc_CDK5 Catalytic do 100.0 4E-36 8.6E-41 315.1 17.9 254 395-660 1-284 (284)
259 KOG0194 Protein tyrosine kinas 100.0 1.3E-36 2.8E-41 331.8 14.6 254 392-665 155-423 (474)
260 cd05095 PTKc_DDR2 Catalytic do 100.0 1E-35 2.2E-40 314.8 21.0 257 393-656 4-292 (296)
261 cd05122 PKc_STE Catalytic doma 100.0 1.8E-35 3.9E-40 302.2 22.2 249 395-659 1-253 (253)
262 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-35 2.7E-40 312.6 20.9 248 396-662 21-274 (285)
263 cd05050 PTKc_Musk Catalytic do 100.0 1.4E-35 3.1E-40 312.0 21.3 248 393-655 4-283 (288)
264 cd05066 PTKc_EphR_A Catalytic 100.0 1.7E-35 3.6E-40 308.0 21.5 247 394-656 4-261 (267)
265 cd05058 PTKc_Met_Ron Catalytic 100.0 1.6E-35 3.4E-40 306.7 21.2 242 400-656 1-254 (262)
266 cd05034 PTKc_Src_like Catalyti 100.0 2.6E-35 5.6E-40 304.9 22.7 246 392-655 4-255 (261)
267 cd08229 STKc_Nek7 Catalytic do 100.0 1.4E-35 3.1E-40 307.9 20.8 249 394-655 2-259 (267)
268 cd07842 STKc_CDK8_like Catalyt 100.0 8.4E-36 1.8E-40 317.4 19.5 259 395-660 1-316 (316)
269 cd05103 PTKc_VEGFR2 Catalytic 100.0 1E-35 2.2E-40 322.0 20.5 251 392-657 5-335 (343)
270 cd05065 PTKc_EphR_B Catalytic 100.0 1.5E-35 3.2E-40 308.6 20.8 249 394-656 4-263 (269)
271 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-35 2.6E-40 320.4 20.8 259 393-662 4-297 (336)
272 KOG0612 Rho-associated, coiled 100.0 4.7E-37 1E-41 349.9 10.0 261 388-665 69-346 (1317)
273 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.5E-35 5.5E-40 314.6 22.7 255 392-662 10-293 (314)
274 cd08225 STKc_Nek5 Catalytic do 100.0 1.3E-35 2.8E-40 306.0 19.6 250 395-660 1-257 (257)
275 cd05578 STKc_Yank1 Catalytic d 100.0 5.3E-36 1.2E-40 309.7 16.8 247 395-660 1-258 (258)
276 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-35 5.4E-40 320.1 22.9 254 392-661 14-315 (353)
277 cd06616 PKc_MKK4 Catalytic dom 100.0 1.2E-35 2.7E-40 312.3 19.8 255 395-662 5-272 (288)
278 cd05085 PTKc_Fer Catalytic dom 100.0 2.9E-35 6.3E-40 302.5 22.1 239 400-656 1-246 (250)
279 PLN00009 cyclin-dependent kina 100.0 2.7E-35 5.8E-40 310.9 22.3 257 394-661 2-288 (294)
280 cd05112 PTKc_Itk Catalytic dom 100.0 7.3E-35 1.6E-39 300.6 25.0 244 394-656 4-253 (256)
281 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.2E-35 4.8E-40 304.5 21.0 231 400-656 1-256 (259)
282 cd06607 STKc_TAO Catalytic dom 100.0 5.1E-35 1.1E-39 311.2 24.2 249 393-662 14-272 (307)
283 cd06626 STKc_MEKK4 Catalytic d 100.0 4.5E-35 9.8E-40 303.1 23.2 254 395-660 1-264 (264)
284 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-35 3.4E-40 312.5 20.0 255 394-660 5-293 (293)
285 cd05073 PTKc_Hck Catalytic dom 100.0 3.2E-35 6.9E-40 304.7 22.0 246 392-655 4-254 (260)
286 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-35 3.9E-40 310.8 20.2 246 395-656 5-278 (284)
287 KOG1094 Discoidin domain recep 100.0 5.4E-36 1.2E-40 320.6 16.0 258 392-659 536-802 (807)
288 cd05055 PTKc_PDGFR Catalytic d 100.0 3E-35 6.4E-40 312.6 21.7 250 391-656 32-296 (302)
289 cd06606 STKc_MAPKKK Catalytic 100.0 4.1E-35 9E-40 300.8 22.0 251 395-660 1-260 (260)
290 KOG0577 Serine/threonine prote 100.0 1.9E-36 4.2E-41 323.7 12.4 244 396-660 28-281 (948)
291 cd05047 PTKc_Tie Catalytic dom 100.0 3.3E-35 7.2E-40 306.5 21.2 239 400-656 1-263 (270)
292 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-35 4.1E-40 309.5 19.4 232 401-657 2-272 (274)
293 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.2E-35 1.1E-39 315.1 23.2 256 392-663 10-294 (334)
294 cd07845 STKc_CDK10 Catalytic d 100.0 3.6E-35 7.9E-40 312.4 21.7 258 393-662 6-295 (309)
295 cd05057 PTKc_EGFR_like Catalyt 100.0 4.8E-35 1E-39 306.5 22.2 251 394-662 7-268 (279)
296 cd07865 STKc_CDK9 Catalytic do 100.0 4E-35 8.6E-40 311.1 21.8 260 393-660 11-310 (310)
297 cd05042 PTKc_Aatyk Catalytic d 100.0 4.3E-35 9.3E-40 305.0 21.5 244 401-656 2-265 (269)
298 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.8E-35 1E-39 304.9 21.9 246 400-656 1-265 (269)
299 KOG0986 G protein-coupled rece 100.0 2E-36 4.3E-41 316.4 11.3 266 380-665 170-454 (591)
300 cd05572 STKc_cGK_PKG Catalytic 100.0 4.6E-35 1E-39 303.4 21.3 242 402-661 1-256 (262)
301 cd06653 STKc_MEKK3_like_1 Cata 100.0 4.4E-35 9.6E-40 304.3 21.1 251 394-659 2-263 (264)
302 cd07855 STKc_ERK5 Catalytic do 100.0 1.8E-35 3.8E-40 318.8 18.5 263 393-664 4-301 (334)
303 cd08216 PK_STRAD Pseudokinase 100.0 4.8E-35 1E-39 311.9 21.4 265 396-664 4-302 (314)
304 cd05046 PTK_CCK4 Pseudokinase 100.0 9.6E-35 2.1E-39 303.2 23.3 249 394-657 5-272 (275)
305 KOG4257 Focal adhesion tyrosin 100.0 5.5E-36 1.2E-40 322.0 14.0 246 394-657 389-645 (974)
306 cd07831 STKc_MOK Catalytic dom 100.0 4.2E-35 9.2E-40 306.6 20.4 251 396-660 1-282 (282)
307 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.1E-35 2.5E-40 307.8 15.8 233 400-656 1-255 (258)
308 cd05044 PTKc_c-ros Catalytic d 100.0 4.8E-35 1E-39 304.3 20.2 242 400-656 1-265 (269)
309 smart00219 TyrKc Tyrosine kina 100.0 8.4E-35 1.8E-39 299.5 21.8 244 396-656 1-256 (258)
310 cd05577 STKc_GRK Catalytic dom 100.0 3.4E-35 7.5E-40 307.5 19.0 247 402-664 1-261 (277)
311 cd07880 STKc_p38gamma_MAPK12 C 100.0 7E-35 1.5E-39 315.5 21.9 257 390-663 11-304 (343)
312 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.1E-35 1.5E-39 315.7 21.9 263 382-661 5-304 (345)
313 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3.2E-35 6.9E-40 317.3 18.8 257 393-662 4-296 (337)
314 PHA03390 pk1 serine/threonine- 100.0 6.9E-35 1.5E-39 304.1 20.5 242 392-661 12-266 (267)
315 KOG0666 Cyclin C-dependent kin 100.0 6.5E-36 1.4E-40 299.6 12.1 260 394-665 24-345 (438)
316 cd07852 STKc_MAPK15 Catalytic 100.0 7E-35 1.5E-39 314.4 21.1 268 392-668 5-306 (337)
317 cd07866 STKc_BUR1 Catalytic do 100.0 3.8E-35 8.1E-40 311.4 18.6 262 393-660 7-311 (311)
318 KOG0584 Serine/threonine prote 100.0 7.8E-36 1.7E-40 324.4 13.5 244 399-663 45-302 (632)
319 cd05041 PTKc_Fes_like Catalyti 100.0 1.5E-34 3.2E-39 297.4 22.3 240 400-656 1-247 (251)
320 cd06657 STKc_PAK4 Catalytic do 100.0 8.5E-35 1.8E-39 307.7 21.0 245 399-662 25-275 (292)
321 cd05633 STKc_GRK3 Catalytic do 100.0 4.7E-35 1E-39 307.4 18.9 247 401-666 1-264 (279)
322 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-34 2.2E-39 298.1 20.9 248 395-660 1-254 (254)
323 KOG0690 Serine/threonine prote 100.0 1.9E-36 4E-41 304.6 7.5 253 394-665 168-432 (516)
324 cd07879 STKc_p38delta_MAPK13 C 100.0 1E-34 2.2E-39 314.1 21.7 253 393-663 14-303 (342)
325 cd07857 STKc_MPK1 Catalytic do 100.0 1.3E-34 2.9E-39 311.7 22.4 284 395-691 1-322 (332)
326 cd07840 STKc_CDK9_like Catalyt 100.0 9.8E-35 2.1E-39 304.1 20.7 254 396-660 1-287 (287)
327 cd07864 STKc_CDK12 Catalytic d 100.0 6.3E-35 1.4E-39 308.8 19.5 259 391-660 4-302 (302)
328 PHA03210 serine/threonine kina 100.0 1.6E-35 3.5E-40 336.1 15.7 262 392-662 146-459 (501)
329 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.5E-35 7.5E-40 307.3 17.1 247 394-656 4-278 (284)
330 cd08215 STKc_Nek Catalytic dom 100.0 1.1E-34 2.3E-39 298.1 20.3 249 395-660 1-258 (258)
331 cd05118 STKc_CMGC Catalytic do 100.0 9.7E-35 2.1E-39 303.7 19.9 253 396-660 1-283 (283)
332 KOG0596 Dual specificity; seri 100.0 1.2E-35 2.7E-40 317.1 12.9 253 394-662 361-632 (677)
333 cd07834 STKc_MAPK Catalytic do 100.0 6.8E-35 1.5E-39 313.1 18.8 258 395-662 1-294 (330)
334 KOG4278 Protein tyrosine kinas 100.0 1.7E-35 3.6E-40 317.4 13.7 251 387-655 260-517 (1157)
335 cd08528 STKc_Nek10 Catalytic d 100.0 2.2E-34 4.7E-39 299.6 21.6 246 395-657 1-266 (269)
336 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.6E-35 1.6E-39 315.1 18.9 259 393-662 4-305 (342)
337 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-34 5.9E-39 308.7 22.9 262 400-665 4-316 (328)
338 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.9E-34 4.2E-39 300.4 21.0 246 396-656 1-267 (273)
339 PTZ00024 cyclin-dependent prot 100.0 1.4E-34 2.9E-39 311.7 20.5 263 393-662 7-318 (335)
340 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-34 2.7E-39 299.9 19.2 250 395-660 1-260 (260)
341 cd05581 STKc_PDK1 Catalytic do 100.0 1.3E-34 2.9E-39 302.0 19.2 254 394-660 1-280 (280)
342 KOG0604 MAP kinase-activated p 100.0 1.6E-35 3.5E-40 295.7 11.4 249 393-662 60-327 (400)
343 KOG0196 Tyrosine kinase, EPH ( 100.0 1.6E-35 3.4E-40 326.2 12.5 249 394-658 629-888 (996)
344 cd06618 PKc_MKK7 Catalytic dom 100.0 2.4E-34 5.1E-39 304.3 20.8 251 393-662 14-278 (296)
345 cd07838 STKc_CDK4_6_like Catal 100.0 4.2E-34 9E-39 299.6 22.3 253 396-660 1-287 (287)
346 PHA02882 putative serine/threo 100.0 3.7E-34 8E-39 303.0 21.7 255 392-655 10-290 (294)
347 cd06635 STKc_TAO1 Catalytic do 100.0 6.3E-34 1.4E-38 304.4 23.7 244 396-662 27-282 (317)
348 cd05613 STKc_MSK1_N N-terminal 100.0 1.4E-34 3.1E-39 304.7 18.1 253 395-664 1-275 (290)
349 cd08530 STKc_CNK2-like Catalyt 100.0 3.9E-34 8.5E-39 294.4 20.7 246 395-659 1-255 (256)
350 cd05606 STKc_beta_ARK Catalyti 100.0 2.5E-34 5.4E-39 301.6 19.5 245 401-664 1-262 (278)
351 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-34 4.8E-39 297.2 18.7 245 402-661 1-261 (265)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.6E-34 5.6E-39 309.2 19.8 255 390-661 6-292 (328)
353 cd07829 STKc_CDK_like Catalyti 100.0 2.6E-34 5.7E-39 300.3 19.1 253 396-660 1-282 (282)
354 cd07830 STKc_MAK_like Catalyti 100.0 2.1E-34 4.6E-39 301.7 18.1 253 396-660 1-283 (283)
355 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.6E-34 9.9E-39 297.7 20.4 243 401-655 2-263 (268)
356 cd05611 STKc_Rim15_like Cataly 100.0 4.6E-34 1E-38 295.6 20.3 242 400-662 2-256 (260)
357 KOG0586 Serine/threonine prote 100.0 1.1E-34 2.3E-39 315.4 14.8 250 391-662 53-311 (596)
358 KOG0199 ACK and related non-re 100.0 1.8E-34 3.9E-39 313.8 15.6 250 396-661 112-372 (1039)
359 cd07851 STKc_p38 Catalytic dom 100.0 2E-34 4.3E-39 311.9 15.3 255 391-662 12-303 (343)
360 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-33 3.6E-38 300.8 21.3 248 396-664 23-280 (313)
361 KOG0669 Cyclin T-dependent kin 100.0 1.7E-35 3.6E-40 289.0 5.3 264 394-665 17-323 (376)
362 cd05610 STKc_MASTL Catalytic d 100.0 2.9E-33 6.4E-38 327.5 25.2 144 393-542 3-153 (669)
363 KOG0696 Serine/threonine prote 100.0 1.4E-34 2.9E-39 298.7 12.1 252 393-665 348-614 (683)
364 cd06634 STKc_TAO2 Catalytic do 100.0 1.2E-33 2.5E-38 301.1 19.8 246 395-663 16-273 (308)
365 KOG4250 TANK binding protein k 100.0 1.8E-34 3.9E-39 317.2 12.7 196 395-600 14-225 (732)
366 cd05583 STKc_MSK_N N-terminal 100.0 7.9E-34 1.7E-38 298.7 17.2 255 395-665 1-274 (288)
367 KOG0608 Warts/lats-like serine 100.0 2E-33 4.2E-38 302.6 19.9 265 393-667 628-938 (1034)
368 KOG1035 eIF-2alpha kinase GCN2 100.0 3.5E-34 7.6E-39 329.0 14.6 257 392-661 477-875 (1351)
369 cd05123 STKc_AGC Catalytic dom 100.0 2.3E-33 5E-38 287.9 18.4 238 402-660 1-250 (250)
370 KOG0587 Traf2- and Nck-interac 100.0 1.9E-33 4.1E-38 314.3 18.3 257 390-661 15-286 (953)
371 KOG4645 MAPKKK (MAP kinase kin 100.0 8.9E-35 1.9E-39 335.2 7.7 254 395-662 1236-1499(1509)
372 KOG0607 MAP kinase-interacting 100.0 8E-34 1.7E-38 285.4 13.2 254 400-664 84-368 (463)
373 KOG0614 cGMP-dependent protein 100.0 2.4E-34 5.3E-39 303.6 8.7 250 395-664 421-684 (732)
374 KOG0983 Mitogen-activated prot 100.0 1.1E-33 2.3E-38 279.4 12.4 251 398-666 96-358 (391)
375 PLN00113 leucine-rich repeat r 100.0 1.3E-32 2.8E-37 336.7 24.5 247 394-662 690-951 (968)
376 cd05576 STKc_RPK118_like Catal 100.0 6.8E-33 1.5E-37 283.8 16.4 225 405-660 4-237 (237)
377 KOG0662 Cyclin-dependent kinas 100.0 3.2E-33 6.9E-38 260.7 12.2 255 395-661 3-287 (292)
378 KOG0603 Ribosomal protein S6 k 100.0 5.4E-33 1.2E-37 303.5 13.9 237 393-660 321-566 (612)
379 KOG4236 Serine/threonine prote 100.0 3E-33 6.4E-38 295.9 10.3 246 399-661 569-823 (888)
380 KOG1006 Mitogen-activated prot 100.0 3.6E-34 7.9E-39 281.9 2.2 258 398-669 68-339 (361)
381 KOG0671 LAMMER dual specificit 100.0 3.6E-33 7.9E-38 287.8 8.5 257 391-662 86-411 (415)
382 KOG3653 Transforming growth fa 100.0 3.6E-32 7.8E-37 286.6 14.6 250 394-659 210-501 (534)
383 smart00220 S_TKc Serine/Threon 100.0 2.2E-31 4.8E-36 269.8 17.9 236 406-660 1-244 (244)
384 KOG1025 Epidermal growth facto 100.0 9.5E-32 2.1E-36 297.2 15.5 279 397-695 699-989 (1177)
385 KOG1290 Serine/threonine prote 100.0 2.8E-31 6.1E-36 280.3 18.0 273 374-661 59-554 (590)
386 PLN03224 probable serine/threo 100.0 4.1E-31 8.8E-36 296.1 19.7 261 392-661 143-504 (507)
387 KOG0200 Fibroblast/platelet-de 100.0 5.4E-31 1.2E-35 304.4 20.9 253 389-657 291-575 (609)
388 KOG2052 Activin A type IB rece 100.0 3.5E-31 7.7E-36 277.2 17.4 261 391-662 208-503 (513)
389 PLN03225 Serine/threonine-prot 100.0 2E-31 4.3E-36 305.2 16.5 261 392-664 130-457 (566)
390 KOG1027 Serine/threonine prote 100.0 6.5E-32 1.4E-36 300.8 8.5 249 396-660 511-770 (903)
391 KOG0695 Serine/threonine prote 100.0 1.1E-31 2.5E-36 270.7 9.4 261 392-665 248-524 (593)
392 KOG0668 Casein kinase II, alph 100.0 4.1E-31 9E-36 255.2 11.9 254 392-664 36-329 (338)
393 KOG0670 U4/U6-associated splic 100.0 1.3E-31 2.9E-36 283.6 6.5 267 380-661 420-750 (752)
394 KOG0665 Jun-N-terminal kinase 100.0 1.3E-29 2.9E-34 256.1 10.6 253 393-662 16-315 (369)
395 KOG0576 Mitogen-activated prot 100.0 5.4E-30 1.2E-34 278.8 6.3 257 392-662 13-276 (829)
396 KOG0984 Mitogen-activated prot 100.0 2.8E-29 6.1E-34 239.4 8.9 201 392-602 44-255 (282)
397 KOG0664 Nemo-like MAPK-related 100.0 3.2E-30 6.9E-35 254.4 1.9 254 396-661 55-347 (449)
398 cd00180 PKc Catalytic domain o 100.0 2.4E-27 5.2E-32 233.7 20.6 207 402-657 1-214 (215)
399 KOG1024 Receptor-like protein 100.0 1.6E-28 3.5E-33 252.9 12.6 250 391-655 281-549 (563)
400 smart00221 STYKc Protein kinas 99.9 1.9E-26 4.2E-31 231.7 19.9 196 396-601 1-202 (225)
401 KOG1152 Signal transduction se 99.9 6.1E-28 1.3E-32 259.0 8.8 193 394-600 561-770 (772)
402 KOG1167 Serine/threonine prote 99.9 1.7E-27 3.7E-32 249.2 8.0 263 391-664 33-388 (418)
403 PLN00181 protein SPA1-RELATED; 99.9 4.4E-27 9.6E-32 281.5 10.5 204 445-662 28-270 (793)
404 KOG1345 Serine/threonine kinas 99.9 2E-26 4.3E-31 227.9 6.7 240 392-653 22-280 (378)
405 smart00750 KIND kinase non-cat 99.9 4.5E-25 9.7E-30 215.0 15.1 166 472-663 1-171 (176)
406 cd01989 STK_N The N-terminal d 99.9 1.1E-24 2.4E-29 206.2 15.9 135 23-158 1-146 (146)
407 COG0515 SPS1 Serine/threonine 99.9 1.7E-22 3.6E-27 211.1 25.4 266 396-665 2-283 (384)
408 PRK09188 serine/threonine prot 99.9 7.5E-24 1.6E-28 228.3 14.2 170 391-575 15-196 (365)
409 KOG1164 Casein kinase (serine/ 99.9 8.6E-23 1.9E-27 219.2 22.0 254 395-657 19-293 (322)
410 KOG1165 Casein kinase (serine/ 99.9 4.1E-22 9E-27 202.4 18.8 272 395-679 29-317 (449)
411 KOG1163 Casein kinase (serine/ 99.9 6.9E-22 1.5E-26 192.9 14.5 250 392-653 13-276 (341)
412 PRK10359 lipopolysaccharide co 99.8 1.9E-21 4E-26 196.0 9.7 170 392-594 29-217 (232)
413 PRK15456 universal stress prot 99.8 1.1E-20 2.4E-25 178.2 13.5 129 21-155 2-142 (142)
414 KOG0590 Checkpoint kinase and 99.8 1.4E-21 2.9E-26 224.0 7.2 262 397-667 321-595 (601)
415 PRK15005 universal stress prot 99.8 3.3E-20 7E-25 175.1 13.7 130 21-155 2-144 (144)
416 KOG0195 Integrin-linked kinase 99.8 5.3E-21 1.2E-25 189.3 8.1 247 396-662 192-446 (448)
417 cd05147 RIO1_euk RIO kinase fa 99.8 1.5E-20 3.3E-25 186.2 10.3 138 399-543 2-167 (190)
418 PRK12274 serine/threonine prot 99.8 5.1E-20 1.1E-24 182.0 12.9 189 397-600 5-208 (218)
419 cd05145 RIO1_like RIO kinase f 99.8 8.5E-20 1.8E-24 181.0 13.2 139 399-544 2-168 (190)
420 KOG1240 Protein kinase contain 99.8 4.6E-20 1E-24 211.1 8.0 249 395-657 24-291 (1431)
421 PRK15118 universal stress glob 99.8 2E-19 4.4E-24 169.9 10.7 129 21-155 3-138 (144)
422 cd01987 USP_OKCHK USP domain i 99.8 5.1E-19 1.1E-23 162.6 12.8 123 23-154 1-123 (124)
423 KOG0603 Ribosomal protein S6 k 99.8 2.9E-20 6.3E-25 204.1 5.0 231 402-661 2-247 (612)
424 KOG0606 Microtubule-associated 99.8 8.6E-20 1.9E-24 209.0 9.0 223 393-666 82-324 (1205)
425 PRK09982 universal stress prot 99.8 3E-19 6.4E-24 168.6 11.2 126 21-155 3-138 (142)
426 cd01988 Na_H_Antiporter_C The 99.8 1.8E-18 3.9E-23 160.1 13.4 130 23-155 1-132 (132)
427 PF14531 Kinase-like: Kinase-l 99.8 5.7E-18 1.2E-22 175.7 15.9 230 395-648 13-288 (288)
428 PRK10345 hypothetical protein; 99.8 4.1E-18 8.9E-23 170.9 12.3 132 399-541 7-158 (210)
429 KOG1033 eIF-2alpha kinase PEK/ 99.7 9.5E-19 2.1E-23 188.9 5.0 184 461-659 330-514 (516)
430 PF00582 Usp: Universal stress 99.7 3.6E-18 7.8E-23 158.0 7.8 132 21-155 2-140 (140)
431 PRK10116 universal stress prot 99.7 1.8E-17 3.9E-22 156.0 12.2 130 21-155 3-138 (142)
432 KOG1166 Mitotic checkpoint ser 99.7 2E-17 4.4E-22 193.5 14.3 196 388-597 692-901 (974)
433 TIGR03724 arch_bud32 Kae1-asso 99.7 2.7E-17 5.8E-22 163.8 13.0 129 401-543 1-139 (199)
434 PRK14879 serine/threonine prot 99.7 2.5E-17 5.4E-22 165.5 12.8 132 400-542 2-143 (211)
435 KOG1023 Natriuretic peptide re 99.7 1.8E-17 4E-22 182.2 10.0 202 443-655 1-218 (484)
436 smart00090 RIO RIO-like kinase 99.7 3.7E-17 8.1E-22 167.6 11.6 141 395-543 29-198 (237)
437 PRK09605 bifunctional UGMP fam 99.7 2.9E-17 6.4E-22 188.2 10.5 136 393-543 332-477 (535)
438 KOG4158 BRPK/PTEN-induced prot 99.7 1.3E-16 2.7E-21 165.9 11.9 192 447-651 274-504 (598)
439 cd05144 RIO2_C RIO kinase fami 99.7 1.7E-16 3.7E-21 158.2 11.7 135 395-543 16-175 (198)
440 PRK11175 universal stress prot 99.7 2.7E-16 5.9E-21 167.4 13.1 132 21-155 3-145 (305)
441 PRK11175 universal stress prot 99.6 1.4E-15 3E-20 162.0 12.9 133 20-155 151-299 (305)
442 cd05119 RIO RIO kinase family, 99.6 1.5E-15 3.3E-20 149.5 10.2 135 399-543 2-164 (187)
443 cd05120 APH_ChoK_like Aminogly 99.6 4.5E-15 9.7E-20 139.1 12.5 134 398-543 2-139 (155)
444 cd00293 USP_Like Usp: Universa 99.6 4.6E-15 1E-19 135.6 11.4 128 23-154 1-130 (130)
445 COG0589 UspA Universal stress 99.6 3.4E-14 7.4E-19 134.4 14.2 132 20-155 4-151 (154)
446 PRK01723 3-deoxy-D-manno-octul 99.5 4E-14 8.6E-19 145.4 13.0 132 400-542 37-191 (239)
447 KOG0590 Checkpoint kinase and 99.5 5.4E-16 1.2E-20 178.0 -1.9 256 393-662 19-291 (601)
448 KOG1266 Protein kinase [Signal 99.4 1.1E-13 2.4E-18 141.4 4.8 207 438-659 116-333 (458)
449 TIGR01982 UbiB 2-polyprenylphe 99.4 1.7E-12 3.7E-17 144.7 13.6 138 400-545 123-309 (437)
450 PRK12652 putative monovalent c 99.4 2E-12 4.4E-17 138.7 12.5 104 20-123 4-122 (357)
451 cd05151 ChoK Choline Kinase (C 99.4 1.7E-12 3.8E-17 125.4 10.1 131 399-542 3-136 (170)
452 KOG0606 Microtubule-associated 99.2 3.6E-12 7.9E-17 147.2 4.2 265 392-666 802-1101(1205)
453 KOG0601 Cyclin-dependent kinas 99.2 6.8E-12 1.5E-16 138.6 4.9 253 395-662 115-384 (524)
454 PRK04750 ubiB putative ubiquin 99.2 3.4E-11 7.4E-16 136.1 9.9 144 393-545 119-316 (537)
455 cd05154 ACAD10_11_like Acyl-Co 99.1 3.9E-10 8.4E-15 113.5 13.0 140 400-543 4-207 (223)
456 cd05146 RIO3_euk RIO kinase fa 99.1 5.2E-10 1.1E-14 110.7 12.6 136 399-543 2-174 (197)
457 KOG0601 Cyclin-dependent kinas 99.1 9.7E-11 2.1E-15 129.6 6.2 243 392-658 263-515 (524)
458 COG3642 Mn2+-dependent serine/ 99.0 2.1E-09 4.6E-14 103.3 12.2 128 401-542 3-140 (204)
459 KOG1243 Protein kinase [Genera 99.0 1.4E-09 3.1E-14 121.5 12.2 162 416-595 36-199 (690)
460 PRK10490 sensor protein KdpD; 99.0 2.5E-09 5.4E-14 129.6 15.0 126 19-155 248-373 (895)
461 KOG3741 Poly(A) ribonuclease s 99.0 3.6E-08 7.8E-13 107.2 18.9 211 408-658 290-522 (655)
462 KOG3087 Serine/threonine prote 98.9 2.1E-08 4.6E-13 96.0 12.4 141 398-542 11-165 (229)
463 COG4248 Uncharacterized protei 98.9 6.4E-08 1.4E-12 102.8 16.3 253 397-664 14-302 (637)
464 PRK15123 lipopolysaccharide co 98.8 7E-08 1.5E-12 100.6 13.5 139 400-542 28-194 (268)
465 COG2205 KdpD Osmosensitive K+ 98.7 1.2E-07 2.7E-12 108.1 13.6 129 18-155 245-373 (890)
466 PF01163 RIO1: RIO1 family; I 98.7 1E-07 2.2E-12 94.0 10.6 124 409-543 1-156 (188)
467 KOG2137 Protein kinase [Signal 98.6 1.4E-08 3.1E-13 114.1 0.6 159 496-660 105-268 (700)
468 PF06293 Kdo: Lipopolysacchari 98.4 9.5E-07 2.1E-11 88.7 10.1 105 433-543 55-171 (206)
469 PRK09902 hypothetical protein; 98.4 3.5E-06 7.6E-11 83.9 13.7 136 402-542 26-179 (216)
470 COG0478 RIO-like serine/threon 98.4 1.1E-06 2.3E-11 89.6 9.8 135 395-542 92-251 (304)
471 PF12260 PIP49_C: Protein-kina 98.3 1.7E-05 3.8E-10 78.3 14.9 105 437-543 7-112 (188)
472 PF06176 WaaY: Lipopolysacchar 98.3 5.2E-06 1.1E-10 83.0 11.1 135 392-541 29-182 (229)
473 COG1718 RIO1 Serine/threonine 98.3 1E-05 2.2E-10 81.8 12.7 152 383-543 34-216 (268)
474 cd01984 AANH_like Adenine nucl 98.2 4.1E-06 9E-11 71.6 6.9 84 24-153 1-85 (86)
475 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.8E-05 3.8E-10 80.8 12.5 138 400-542 7-182 (226)
476 PF01636 APH: Phosphotransfera 98.2 1E-05 2.2E-10 81.6 10.7 142 399-542 2-197 (239)
477 COG0661 AarF Predicted unusual 98.2 1.3E-05 2.9E-10 90.5 12.0 138 400-545 131-317 (517)
478 cd05150 APH Aminoglycoside 3'- 98.1 3E-05 6.5E-10 79.8 11.7 139 401-542 5-193 (244)
479 COG2112 Predicted Ser/Thr prot 98.0 2.8E-05 6E-10 74.7 9.6 128 398-542 26-155 (201)
480 KOG0576 Mitogen-activated prot 98.0 6.3E-07 1.4E-11 99.9 -3.0 188 392-601 240-432 (829)
481 PLN02876 acyl-CoA dehydrogenas 98.0 9.2E-05 2E-09 89.6 15.1 147 399-545 43-260 (822)
482 KOG1235 Predicted unusual prot 97.9 5.7E-05 1.2E-09 85.3 10.2 138 400-545 167-357 (538)
483 cd05155 APH_ChoK_like_1 Unchar 97.9 9.8E-05 2.1E-09 75.6 11.1 72 399-475 2-82 (235)
484 cd05157 ETNK_euk Ethanolamine 97.8 0.00022 4.9E-09 72.7 11.8 141 399-542 3-201 (235)
485 TIGR02721 ycfN_thiK thiamine k 97.7 0.00013 2.7E-09 75.8 9.6 138 402-542 4-175 (256)
486 KOG1035 eIF-2alpha kinase GCN2 97.7 0.00012 2.7E-09 87.1 9.7 200 436-664 229-441 (1351)
487 PRK09550 mtnK methylthioribose 97.7 0.00068 1.5E-08 74.6 14.8 75 399-473 31-117 (401)
488 PRK10593 hypothetical protein; 97.6 0.00062 1.3E-08 72.4 13.3 74 399-474 19-100 (297)
489 PF13095 FTA2: Kinetochore Sim 97.6 0.00064 1.4E-08 67.4 12.0 123 394-540 37-206 (207)
490 PRK05231 homoserine kinase; Pr 97.5 0.0014 2.9E-08 70.3 14.3 139 400-541 28-216 (319)
491 cd05153 HomoserineK_II Homoser 97.5 0.00056 1.2E-08 72.4 10.7 141 399-542 19-205 (296)
492 KOG1826 Ras GTPase activating 97.4 8.3E-05 1.8E-09 90.1 2.6 175 420-600 1255-1441(2724)
493 PF10707 YrbL-PhoP_reg: PhoP r 97.4 0.0018 3.8E-08 64.6 11.6 132 399-542 6-172 (199)
494 TIGR00938 thrB_alt homoserine 97.3 0.0037 8E-08 66.7 14.3 141 399-541 27-216 (307)
495 cd05156 ChoK_euk Choline Kinas 97.3 0.0016 3.5E-08 69.2 11.1 140 400-542 4-213 (302)
496 PLN02756 S-methyl-5-thioribose 97.1 0.0031 6.8E-08 69.3 10.6 80 399-478 37-128 (418)
497 PLN02236 choline kinase 97.0 0.0068 1.5E-07 65.9 12.4 142 399-543 41-232 (344)
498 COG3173 Predicted aminoglycosi 96.9 0.0083 1.8E-07 64.0 12.2 146 399-545 30-231 (321)
499 TIGR01767 MTRK 5-methylthiorib 96.8 0.0049 1.1E-07 66.6 9.2 78 401-478 2-92 (370)
500 KOG2268 Serine/threonine prote 96.7 0.0015 3.3E-08 68.5 3.9 150 380-543 75-252 (465)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-49 Score=429.40 Aligned_cols=268 Identities=46% Similarity=0.787 Sum_probs=233.5
Q ss_pred cccccCHHHHHHhhcCceeeeeeeecCceeEEEEEECC-ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee
Q 005343 380 RYRKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQLDH-TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC 458 (701)
Q Consensus 380 ~~~~~~~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~ 458 (701)
....|++.++..+|++|...+.||+||||.||+|...+ +.||||.+.........+|.+|+.+|.+++|||+|+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45679999999999999999999999999999999966 78999988776543145699999999999999999999999
Q ss_pred cCC---CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEE
Q 005343 459 PEY---GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKIS 535 (701)
Q Consensus 459 ~~~---~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~ 535 (701)
.+. .+||||||++|+|.+.|+..... +++|..|++||.++|.||.|||...+.|||||||||+|||||.++.+||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc
Confidence 542 58999999999999999876554 89999999999999999999999888899999999999999999999999
Q ss_pred eeccccccCC-CCCccccccccccc-ccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCc---------hH
Q 005343 536 DVGLARLVPP-SAADTITQYHMTTA-AGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLS---------HQ 604 (701)
Q Consensus 536 DFGla~~~~~-~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~---------~~ 604 (701)
|||+|+..+. .. ..... .||++|+||||..++.++.++|||||||+|+||+||++|.+.. .+
T Consensus 220 DFGLa~~~~~~~~-------~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w 292 (361)
T KOG1187|consen 220 DFGLAKLGPEGDT-------SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEW 292 (361)
T ss_pred CccCcccCCcccc-------ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHH
Confidence 9999976643 11 11222 8999999999999999999999999999999999999887632 23
Q ss_pred HHHHHHcCccccccCccCC--CCCH-HHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 605 VEQAIRNGTFSELLDPTVT--GWPV-EAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 605 ~~~~i~~~~~~~~ld~~~~--~~p~-~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
....+.++.+.+++|+.+. .++. .....+..++.+|++.+|++||+|.+|+
T Consensus 293 ~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv 346 (361)
T KOG1187|consen 293 AKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV 346 (361)
T ss_pred HHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence 4567788899999999985 4443 4666799999999999999999999984
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.3e-47 Score=394.05 Aligned_cols=256 Identities=28% Similarity=0.447 Sum_probs=212.2
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC-------hHHHHHHHHHHHhCCCCcEEEEecee--cC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG-------PRQFKQEVEILGSMRHTNMVILLGAC--PE 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~-------~~~~~~Ei~il~~l~HpnIv~l~g~~--~~ 460 (701)
..+.|.+.+.||+|+||.|-+|... ++.||||++++..... .....+|++||++|+|||||+++++| ++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4567999999999999999999885 4569999998765332 12357999999999999999999999 45
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC---CcEEEEee
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN---YVSKISDV 537 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~---~~~KL~DF 537 (701)
+.||||||++||+|.+.+..+. .+.+....-++.|++.||.|||+.| |+||||||+|||+..+ ..+||+||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk---~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANK---YLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred ceEEEEEEecCccHHHHHHhcc---ccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEeccc
Confidence 5699999999999999996654 3566677889999999999999999 9999999999999766 88999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHc
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM---LGVKSDLYSLGVVLLQLITARPAMGLSH---QVEQAIRN 611 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDvwSlGvil~elltG~~pf~~~~---~~~~~i~~ 611 (701)
|+|+.... ...+.+.|||+.|.|||++.+.. +..++|+||+|||||-+|+|+|||.... ...+.+..
T Consensus 324 GlAK~~g~-------~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~ 396 (475)
T KOG0615|consen 324 GLAKVSGE-------GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILK 396 (475)
T ss_pred chhhcccc-------ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhc
Confidence 99997642 23467899999999999987765 3458899999999999999999997543 25666777
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
|++... | ..| .....+..+||.+||..||++||++.++|.|+|++.-.+
T Consensus 397 G~y~f~--p--~~w-~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~ 445 (475)
T KOG0615|consen 397 GRYAFG--P--LQW-DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC 445 (475)
T ss_pred Cccccc--C--hhh-hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence 776422 1 112 345667899999999999999999999999999996443
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-47 Score=389.21 Aligned_cols=248 Identities=29% Similarity=0.398 Sum_probs=207.0
Q ss_pred eeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecCC---CceEEeecC
Q 005343 397 SISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPEY---GCLVYEYME 470 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~---~~lV~Ey~~ 470 (701)
+.++.||+|..|+|||++++.+ -+|+|++...... ..+++.+|+++++.++||+||.+||+|... .+|+||||+
T Consensus 82 e~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMD 161 (364)
T KOG0581|consen 82 ERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMD 161 (364)
T ss_pred hhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcC
Confidence 3457899999999999999744 5999999665433 356799999999999999999999998443 479999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
+|||++++..- ..+++....+|+.+|++||.|||. .+ ||||||||+|||++..|.+||||||.++.+..+
T Consensus 162 gGSLd~~~k~~---g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 162 GGSLDDILKRV---GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred CCCHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 99999988443 458999999999999999999995 78 999999999999999999999999999876433
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHcCccccccCccCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLS-----HQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~-----~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
...+.+||..|||||.+.+..|+.++||||||+.++||.+|+.||... ..++- +..+.+..-+.
T Consensus 233 -----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~L------l~~Iv~~ppP~ 301 (364)
T KOG0581|consen 233 -----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFEL------LCAIVDEPPPR 301 (364)
T ss_pred -----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHH------HHHHhcCCCCC
Confidence 346789999999999999999999999999999999999999888654 11111 01122212233
Q ss_pred CCHH-HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 625 WPVE-AALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 625 ~p~~-~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.|.. .+.+|..|+..||+.+|.+||++.+++.|+|.+-..
T Consensus 302 lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 302 LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 4443 667899999999999999999999999999998533
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.2e-46 Score=401.06 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=213.3
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~ 466 (701)
.+|...+.||+|||..||.+++ .+..||+|++.+... ...+.+.+||+|.+.|+|||||+++++|.+. .|||+
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4699999999999999999998 455699999977432 2345689999999999999999999999764 48999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
|+|.+|+|..++. ...++++.+.+.++.||+.||.|||+++ |||||||..|+||+.+.++||+|||||..+...
T Consensus 98 ELC~~~sL~el~K---rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLK---RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHH---hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecCc
Confidence 9999999999885 3457999999999999999999999999 999999999999999999999999999988543
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~ 624 (701)
. .+..+.|||+.|+|||++....++..+||||+|||||.||+|+|||.... +.-..|....+ .
T Consensus 172 ~------Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y---------~ 236 (592)
T KOG0575|consen 172 G------ERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEY---------S 236 (592)
T ss_pred c------cccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCc---------c
Confidence 2 34578899999999999999999999999999999999999999998653 23333443332 2
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.|.....+..+||..+|+.+|.+||++.+||.|+|++
T Consensus 237 ~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 237 MPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred cccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 3445556789999999999999999999999999994
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-45 Score=393.32 Aligned_cols=244 Identities=34% Similarity=0.559 Sum_probs=206.2
Q ss_pred ceeeeeeeecCceeEEEEEECCce-EEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceecCC---CceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHTS-VAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACPEY---GCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~~-vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~~---~~lV~Ey~ 469 (701)
+.+.+.||.|+||+||+|.+.++. ||||++....... ...|.+|+.+|.+++|||||.|+|+|.+. .++|||||
T Consensus 43 l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 43 LPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 344556999999999999999998 9999998765333 34899999999999999999999999664 58999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-cEEEEeeccccccCCCCC
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARLVPPSAA 548 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~~~~~~~ 548 (701)
++|+|..+|... ....+++..+++|+.|||.||.|||+.++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 123 ~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 999999999775 45679999999999999999999999986 99999999999999997 99999999998764321
Q ss_pred cccccccccccccCCCccCccccc--CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--H-HcCccccccCccCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQ--TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--I-RNGTFSELLDPTVT 623 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i-~~~~~~~~ld~~~~ 623 (701)
...+...||+.|||||++. ...|+.++|||||||+||||+||+.||........+ + ..+. ..
T Consensus 199 -----~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~--------Rp 265 (362)
T KOG0192|consen 199 -----TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL--------RP 265 (362)
T ss_pred -----ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC--------CC
Confidence 2335578999999999999 568999999999999999999999999876642222 2 2222 12
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..|..++..+..++.+||..+|..||++.+|+.
T Consensus 266 ~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 266 PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 334446667999999999999999999999974
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-45 Score=380.30 Aligned_cols=252 Identities=30% Similarity=0.484 Sum_probs=205.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLV 465 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV 465 (701)
..++|.+.+.||.|+||+||+|++ .++.||||.+.+.. ....+.+..|+.||+.++|||||.|++++. +..|||
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred ccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 356799999999999999999998 45679999887763 233455889999999999999999999984 455899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC------CcEEEEeecc
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN------YVSKISDVGL 539 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~------~~~KL~DFGl 539 (701)
||||+||+|.+++..++ .+++.+...++.||+.||++||+++ ||||||||+||||+.+ -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~---~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRG---RLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999996654 5889999999999999999999999 9999999999999764 5689999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSEL 617 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ 617 (701)
|+.+.+.. ...+.||++.|||||+++..+|+.|+|+||+|+|||+|++|++||.... +....++.++-
T Consensus 162 AR~L~~~~-------~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~--- 231 (429)
T KOG0595|consen 162 ARFLQPGS-------MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNE--- 231 (429)
T ss_pred hhhCCchh-------HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcccc---
Confidence 99986432 3467899999999999999999999999999999999999999997443 23333343331
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.....+......+.+++...++.+|.+|-++.+-+.|.+..-
T Consensus 232 ---~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 232 ---IVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAA 273 (429)
T ss_pred ---ccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhccc
Confidence 111222233334668888888888888888887777766543
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-45 Score=364.86 Aligned_cols=249 Identities=27% Similarity=0.433 Sum_probs=209.8
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEec-eecCC---CceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLG-ACPEY---GCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g-~~~~~---~~lV 465 (701)
.+|.++++||+|.||+||++.. ++..||.|.++....+. ......|+.+|++|+|||||++++ .|.+. .+||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3588999999999999999987 66779999988665443 345889999999999999999998 44332 4799
Q ss_pred EeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCC-CeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 466 YEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPE-PLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~-~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
||||.+|+|...+... .....+++..+++++.|++.||..+|+.-+. .|+||||||.||+|+.+|.+||+||||++++
T Consensus 99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 9999999999988653 3445789999999999999999999984332 4899999999999999999999999999998
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCcc
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~ 621 (701)
.... ....+.+|||.||+||.+...+|+.++||||+||++|||+.-.+||.+.+ .....|.+|.+..
T Consensus 179 ~s~~------tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~----- 247 (375)
T KOG0591|consen 179 SSKT------TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPP----- 247 (375)
T ss_pred cchh------HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCC-----
Confidence 5432 22467899999999999999999999999999999999999999998775 4566778886543
Q ss_pred CCCCC-HHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 622 VTGWP-VEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 622 ~~~~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.| .-.+..+..||..|+..||..||+...++.
T Consensus 248 ---~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 248 ---LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred ---CcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 23 456677999999999999999999755543
No 8
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-43 Score=378.95 Aligned_cols=260 Identities=24% Similarity=0.309 Sum_probs=208.7
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCCCh---HHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQGP---RQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~~---~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
..++|.++..||+|+||.||+|+-+.|+ +|+|++++...... ..+..|-.||...++|+||+||-.|.+ +.||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 5678999999999999999999986665 99999998765443 447889999999999999999999954 5689
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||++||++..+|.+. ..|++.....++.+++.||..||+.| ||||||||+|+|||..|++||+|||||.-+.
T Consensus 219 iMEylPGGD~mTLL~~~---~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRK---DTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhc---CcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchhh
Confidence 99999999999999554 46888888999999999999999999 9999999999999999999999999995432
Q ss_pred CCCC-------------------cccc------c----------------ccccccccCCCccCcccccCCCCCchhhHH
Q 005343 545 PSAA-------------------DTIT------Q----------------YHMTTAAGTFCYIDPEYQQTGMLGVKSDLY 583 (701)
Q Consensus 545 ~~~~-------------------~~~~------~----------------~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvw 583 (701)
.... .... . ......+|||.|||||++.+..|+..+|+|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1000 0000 0 001357999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCH--HHHHHHHHHHHHhhccCcCCCCC---hhhhhh
Q 005343 584 SLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPV--EAALSIAKLALQCCELRKRDRPD---LVSVVL 656 (701)
Q Consensus 584 SlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~--~~~~~l~~li~~cl~~~P~~RPt---~~~vl~ 656 (701)
|||||+||||.|+|||...... .+.|.... ..+ .+|. ....+..+||.+||. +|..|-- +.+|-.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr--~~l-----~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~ 444 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETYRKIVNWR--ETL-----KFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKK 444 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh--hhc-----cCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhc
Confidence 9999999999999999866543 22232221 111 1221 223568999999999 9999986 889999
Q ss_pred HHHHHHHhc
Q 005343 657 PELIRLRDL 665 (701)
Q Consensus 657 ~~~~~l~~~ 665 (701)
|+||+--++
T Consensus 445 HPfF~~v~W 453 (550)
T KOG0605|consen 445 HPFFKGVDW 453 (550)
T ss_pred CCccccCCc
Confidence 988775443
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-44 Score=372.36 Aligned_cols=253 Identities=27% Similarity=0.326 Sum_probs=209.0
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
..++|++++.||+|+||+||.++..++. +|+|++++.... ..+....|..||..++||+||.++-.|.+ ..||
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3567999999999999999999986554 999999876532 34568999999999999999999999865 4599
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|+||+.||.|...|.+. ..|++....-++.+|+.||.|||+.+ ||||||||+|||||..|+++|+|||||+..-
T Consensus 103 Vld~~~GGeLf~hL~~e---g~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQRE---GRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EEeccCCccHHHHHHhc---CCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 99999999999988543 45888888889999999999999999 9999999999999999999999999998532
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
... ....+.|||+.|||||++....|+..+|||||||++||||+|.|||...+. ..+.+..++.
T Consensus 177 ~~~------~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-------- 242 (357)
T KOG0598|consen 177 KDG------DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-------- 242 (357)
T ss_pred cCC------CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC--------
Confidence 211 123558999999999999999999999999999999999999999987653 3444444441
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCC----ChhhhhhHHHHHHHh
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRP----DLVSVVLPELIRLRD 664 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RP----t~~~vl~~~~~~l~~ 664 (701)
...|.-.+....+++...|..+|+.|- ++.+|=.|++++-.+
T Consensus 243 ~~~p~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in 288 (357)
T KOG0598|consen 243 PLPPGYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN 288 (357)
T ss_pred CCCCccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence 111222334578999999999999994 688888887776544
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=5.4e-44 Score=356.87 Aligned_cols=255 Identities=26% Similarity=0.373 Sum_probs=206.1
Q ss_pred cCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~E 467 (701)
+.|+.+.++|+|+||.||||++++|+ ||||.+.....+ ..+...+||.+|++++|||+|.|+.+|... .+||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 35788899999999999999997665 999998766432 234579999999999999999999999554 489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
||+..-|.+ |.+.. ..++.....+++.|++.|+.|+|+++ +|||||||+|||++.+|.+||||||+|+.+....
T Consensus 82 ~~dhTvL~e-Le~~p--~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 82 YCDHTVLHE-LERYP--NGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred ecchHHHHH-HHhcc--CCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 998765554 43333 35788899999999999999999999 9999999999999999999999999999886321
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----------------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---------------- 610 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---------------- 610 (701)
...+..+.|.||+|||.+.+ ..|++.+||||+||++.||+||.|.|.+.+++++...
T Consensus 156 ------d~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 156 ------DNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred ------chhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHh
Confidence 12467789999999998877 6799999999999999999999999998888776542
Q ss_pred --cCccccccCccCCC-CC-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 611 --NGTFSELLDPTVTG-WP-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 611 --~~~~~~~ld~~~~~-~p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
++.|..+--|.... .| .....-+.+|+..||..||.+|++-.+++.|+.|
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yF 287 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYF 287 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHH
Confidence 11222221121111 01 1223358899999999999999999999999887
No 11
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-43 Score=376.06 Aligned_cols=255 Identities=31% Similarity=0.400 Sum_probs=208.2
Q ss_pred cCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC----CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE----YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV 465 (701)
+.|+.+++||+|.||.||+|++..+ .||+|.+..+. ........+||.||++|+||||++|.+...+ ..|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 4577889999999999999998554 49999998876 3345668999999999999999999998743 34899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+|||++ +|.-++.. ..-.|+..++..++.||+.||.|||.++ |+|||||.+|||||++|.+||+|||||+++.+
T Consensus 197 FeYMdh-DL~GLl~~--p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSS--PGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred Eecccc-hhhhhhcC--CCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeeccC
Confidence 999976 77666632 2346999999999999999999999999 99999999999999999999999999998866
Q ss_pred CCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.... ..+..+-|+||+|||++.+. .|+..+|+||.||||.||++|+|.|.+..++++.-.- |.....|....
T Consensus 271 ~~~~-----~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kI--fklcGSP~e~~ 343 (560)
T KOG0600|consen 271 SGSA-----PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKI--FKLCGSPTEDY 343 (560)
T ss_pred CCCc-----ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHH--HHHhCCCChhc
Confidence 5432 25788999999999987664 6999999999999999999999999999888775431 11111111111
Q ss_pred CC------------------------HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 625 WP------------------------VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 625 ~p------------------------~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
|+ ...+....+|+..+|.+||.+|.|+.++|.++||.
T Consensus 344 W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~ 404 (560)
T KOG0600|consen 344 WPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFT 404 (560)
T ss_pred cccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccc
Confidence 21 01123567999999999999999999999999884
No 12
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-43 Score=348.53 Aligned_cols=248 Identities=27% Similarity=0.347 Sum_probs=211.8
Q ss_pred cCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCChH---HHHHHHHHHHhCCCCcEEEEeceecCCC--ceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQGPR---QFKQEVEILGSMRHTNMVILLGACPEYG--CLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~~~---~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV~ 466 (701)
++|..++.||.|+||+|.+++.+.+ .+|+|++.+...-..+ ...+|..+|+.+.||+++++++.|.+.. +|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 4588899999999999999998544 4999999876544433 3678999999999999999999996654 8999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||.+||.|..+|.+ ...|+......++.||+.||+|||+++ |++|||||+|||||.+|.+||+|||+|+.+...
T Consensus 124 eyv~GGElFS~Lrk---~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK---SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred eccCCccHHHHHHh---cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 99999999999944 346889999999999999999999999 999999999999999999999999999987432
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
..+.|||+.|+|||+++...|+..+|+|||||++|||+.|+|||...+.. -+.|-++.+ .
T Consensus 198 ---------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v---------~ 259 (355)
T KOG0616|consen 198 ---------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV---------K 259 (355)
T ss_pred ---------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc---------c
Confidence 46789999999999999999999999999999999999999999877652 233334432 4
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCC-----CChhhhhhHHHHHHHhc
Q 005343 625 WPVEAALSIAKLALQCCELRKRDR-----PDLVSVVLPELIRLRDL 665 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~R-----Pt~~~vl~~~~~~l~~~ 665 (701)
+|.-....+.+|+...|+.|-..| +...+|-.|+|++--++
T Consensus 260 fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 260 FPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDW 305 (355)
T ss_pred CCcccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccH
Confidence 566666678999999999999999 45678999999984443
No 13
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.7e-42 Score=341.19 Aligned_cols=255 Identities=26% Similarity=0.384 Sum_probs=211.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-C-hHHHHHHHHHHHhCCCCcEEEEeceecCCC--ceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-G-PRQFKQEVEILGSMRHTNMVILLGACPEYG--CLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV~E 467 (701)
++|...++||+|.||.||+|++. ++.||||.++..... + .....+||..|+.++||||+.|+++|++.. .||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 45777889999999999999984 556999988766432 2 346899999999999999999999997654 68999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
||+ .+|+..+. +....++...+..++.+++.||+|||.+. |+||||||.|+|++.+|.+||+|||+|+.+.+..
T Consensus 82 fm~-tdLe~vIk--d~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~ 155 (318)
T KOG0659|consen 82 FMP-TDLEVVIK--DKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN 155 (318)
T ss_pred ecc-ccHHHHhc--ccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCCC
Confidence 995 69998884 34467999999999999999999999999 9999999999999999999999999999986543
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p 626 (701)
. ..+..+-|.||+|||++.+ ..|+..+|+||.|||+.||+-|.|.|.+.+++++.-. .|.-+..|....||
T Consensus 156 ~------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~--If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 156 R------IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSK--IFRALGTPTPDQWP 227 (318)
T ss_pred c------ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHH--HHHHcCCCCcccCc
Confidence 2 1234488999999997654 5699999999999999999999999999988877644 22223333333333
Q ss_pred H-----------------------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 627 V-----------------------EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 627 ~-----------------------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
. .+.....+|+..|+..+|.+|+++.+.+.|.+++-
T Consensus 228 ~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~ 286 (318)
T KOG0659|consen 228 EMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS 286 (318)
T ss_pred cccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc
Confidence 1 22345789999999999999999999999999985
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-43 Score=375.89 Aligned_cols=261 Identities=27% Similarity=0.351 Sum_probs=214.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhC-CCCcEEEEeceecCC--Cce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSM-RHTNMVILLGACPEY--GCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~~l 464 (701)
..+|.+++.||+|+|++||+|+.. ++.||||++.+.-. ...+-+.+|-++|.+| .||.|++||-.|.|. .|+
T Consensus 72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYF 151 (604)
T KOG0592|consen 72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYF 151 (604)
T ss_pred hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEE
Confidence 356888999999999999999985 45699999876531 1223478899999999 899999999999664 489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|+||+++|+|.++|.+. ..|++.....++.+|+.||+|||++| ||||||||+|||||.++++||+|||.|+.++
T Consensus 152 vLe~A~nGdll~~i~K~---Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 152 VLEYAPNGDLLDLIKKY---GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred EEEecCCCcHHHHHHHh---CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999999999999654 45888888889999999999999999 9999999999999999999999999999987
Q ss_pred CCCCc-------ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccc
Q 005343 545 PSAAD-------TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSEL 617 (701)
Q Consensus 545 ~~~~~-------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ 617 (701)
+.... ........+++||..|.+||++..+..++.+|+|+||||||+|+.|.|||...++....-+ +
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk------I 299 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK------I 299 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH------H
Confidence 65432 1112223679999999999999999999999999999999999999999987765321111 1
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcc
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLG 666 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~ 666 (701)
+ .....||...+....+|+.+.|-.+|.+|++..+|-.|+||.--++.
T Consensus 300 ~-~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~ 347 (604)
T KOG0592|consen 300 Q-ALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWE 347 (604)
T ss_pred H-HhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccCChh
Confidence 1 01123444455668999999999999999999999999998865553
No 15
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-42 Score=363.01 Aligned_cols=259 Identities=25% Similarity=0.396 Sum_probs=211.4
Q ss_pred cCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEece--ecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGA--CPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~--~~~--~~~lV~E 467 (701)
.+|...+.||+|+||.||++.... ...|||..........+.+.+|+.+|++++|||||+++|. ..+ ..+++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 457778999999999999999954 6699998876633335678999999999999999999996 344 3689999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~~~ 546 (701)
|+++|+|.+++.+.+. .|++..+.++..||++||.|||+++ ||||||||+|||++. ++.+||+|||+++.....
T Consensus 97 y~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred ccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 9999999999966544 6999999999999999999999999 999999999999999 799999999999876431
Q ss_pred CCcccccccccccccCCCccCcccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCC-chHHHHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGM-LGVKSDLYSLGVVLLQLITARPAMGL-SHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~-~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
...........||+.|||||++..+. .+.++|||||||+++||+||++||.. .......+..+.- ...+.
T Consensus 172 ---~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~-----~~~P~ 243 (313)
T KOG0198|consen 172 ---GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE-----DSLPE 243 (313)
T ss_pred ---cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc-----CCCCC
Confidence 11111234678999999999998644 34599999999999999999999976 3333333333321 12235
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
+|...+....+|+.+|+..+|..|||+.++|.|+|.+....
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI 284 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence 56666677999999999999999999999999999986443
No 16
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-42 Score=371.25 Aligned_cols=255 Identities=24% Similarity=0.357 Sum_probs=217.3
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey 468 (701)
...|....+||+|+.|.||.+... +..||||.+........+-+.+|+.+|+..+|+|||.++..| .+..+.||||
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 345777789999999999999874 455999999888767777799999999999999999999887 4567999999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|+||+|.|.+.. ..+++.++..|+.+++.||.|||.++ |||||||.+|||++.+|.+||+|||+|..+....
T Consensus 352 m~ggsLTDvVt~----~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~- 423 (550)
T KOG0578|consen 352 MEGGSLTDVVTK----TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ- 423 (550)
T ss_pred cCCCchhhhhhc----ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeecccccc-
Confidence 999999998833 34899999999999999999999999 9999999999999999999999999999875533
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.+..+.+||++|||||+.....|++++||||||++++||+-|.|||=..+.+...+.-. ....|.+ ..+..
T Consensus 424 -----~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa---~ng~P~l-k~~~k 494 (550)
T KOG0578|consen 424 -----SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIA---TNGTPKL-KNPEK 494 (550)
T ss_pred -----CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHh---hcCCCCc-CCccc
Confidence 25678899999999999999999999999999999999999999996655544433211 1122333 23455
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.+..|.+|+.+||..|+.+||++.++|.|+|+++..
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~ 530 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK 530 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence 667799999999999999999999999999997643
No 17
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-42 Score=366.27 Aligned_cols=260 Identities=26% Similarity=0.383 Sum_probs=213.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChH-HHHHHHHHHHhCC-CCcEEEEeceecCCC---ce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPR-QFKQEVEILGSMR-HTNMVILLGACPEYG---CL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~-~~~~Ei~il~~l~-HpnIv~l~g~~~~~~---~l 464 (701)
..++|.++++||.|.||.||+|+.. +..||||.++.......+ .-.+|+..|++|+ |||||+|..++.|.. ++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 3467999999999999999999974 445999988766533222 2478999999998 999999999985544 79
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|||||+ .+|..++..+ ..+|++..+..|+.||++||+|+|.+| +.||||||+|||+..+..+||+||||||-+.
T Consensus 88 VfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEecccccccccc
Confidence 999995 6898887554 578999999999999999999999999 9999999999999999999999999999774
Q ss_pred CCCCcccccccccccccCCCccCcccc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQ-QTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~ 623 (701)
.. ...+..+.|.||+|||++ +.+.|+.++|+||+|||++|+.+-+|.|.+.++++++++-=. -+..|...
T Consensus 162 Sk-------pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~--VLGtP~~~ 232 (538)
T KOG0661|consen 162 SK-------PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICE--VLGTPDKD 232 (538)
T ss_pred cC-------CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHH--HhCCCccc
Confidence 32 234677899999999965 567799999999999999999999999999998887765100 01111111
Q ss_pred CCC-------------------------HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcc
Q 005343 624 GWP-------------------------VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLG 666 (701)
Q Consensus 624 ~~p-------------------------~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~ 666 (701)
.|+ .....+..+++.+||++||.+|||+.+.+.|++++.....
T Consensus 233 ~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 233 SWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGRAS 300 (538)
T ss_pred cchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccccc
Confidence 111 1244568999999999999999999999999999985543
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=369.40 Aligned_cols=242 Identities=30% Similarity=0.472 Sum_probs=204.0
Q ss_pred CceeeeeeeecCceeEEEEEECCc-eEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEeecCC
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHT-SVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEYMEN 471 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~-~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey~~~ 471 (701)
.+.+++.||+|-||.||.|.++++ .||+|.++.. ......|.+|+++|++|+|+|||+|+|+|... .+||||||+.
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~ 285 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPK 285 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEeccc
Confidence 356678999999999999999877 7999999775 35667899999999999999999999999653 4999999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.++|.. .....+...+.+.++.|||+|++||++++ +|||||-..||||+++..+||+|||||+.+..+...
T Consensus 286 GsLl~yLr~-~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~-- 359 (468)
T KOG0197|consen 286 GSLLDYLRT-REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYT-- 359 (468)
T ss_pred CcHHHHhhh-cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCCCcee--
Confidence 999999965 34456888999999999999999999999 999999999999999999999999999965432211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCccCCCCCHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.....--...|.|||.+..+.++.+||||||||+||||+| |+.|++... ++-..+..|-- ...|..
T Consensus 360 ---~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyR--------lp~P~~ 428 (468)
T KOG0197|consen 360 ---ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYR--------LPRPEG 428 (468)
T ss_pred ---ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCc--------CCCCCC
Confidence 1122223467999999999999999999999999999999 888877553 45555666531 245667
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSV 654 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~v 654 (701)
|+..+.+++..||..+|++|||+..+
T Consensus 429 CP~~vY~lM~~CW~~~P~~RPtF~~L 454 (468)
T KOG0197|consen 429 CPDEVYELMKSCWHEDPEDRPTFETL 454 (468)
T ss_pred CCHHHHHHHHHHhhCCcccCCCHHHH
Confidence 77889999999999999999999844
No 19
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-41 Score=365.20 Aligned_cols=251 Identities=29% Similarity=0.403 Sum_probs=210.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCC----CC-CChHHHHHHHHHHHhCC-CCcEEEEecee--cCC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPD----IS-QGPRQFKQEVEILGSMR-HTNMVILLGAC--PEY 461 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~----~~-~~~~~~~~Ei~il~~l~-HpnIv~l~g~~--~~~ 461 (701)
..+.|.+.+.||+|+||.|+.|.+ .+..||+|++... .. ...+.+.+|+.+++.++ ||||++++.++ ...
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 467899999999999999999988 4567999987664 12 23456788999999999 99999999998 445
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC-CcEEEEeeccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN-YVSKISDVGLA 540 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~-~~~KL~DFGla 540 (701)
.++||||+.||+|.+++.. ..++.+....+++.|++.|+.|||+++ |+||||||+|||++.+ +.+||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~---~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN---KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHH---cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 6899999999999999966 345778899999999999999999999 9999999999999999 99999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCC-C-CchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCcccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM-L-GVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSE 616 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~-~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~ 616 (701)
.... .......+.+||+.|+|||++.+.. | +.++||||+||+||-|++|+.||...+... ..+..+.+
T Consensus 169 ~~~~------~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~-- 240 (370)
T KOG0583|consen 169 AISP------GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF-- 240 (370)
T ss_pred cccC------CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc--
Confidence 8763 1122457889999999999999877 7 589999999999999999999998755322 22333332
Q ss_pred ccCccCCCCCHHH-HHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 617 LLDPTVTGWPVEA-ALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 617 ~ld~~~~~~p~~~-~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
.+|... ..++..|+.+||..+|..|+++.+|+.|+|++..
T Consensus 241 -------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~~ 281 (370)
T KOG0583|consen 241 -------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQKE 281 (370)
T ss_pred -------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhccC
Confidence 223333 5678999999999999999999999999999973
No 20
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5e-42 Score=346.93 Aligned_cols=256 Identities=27% Similarity=0.336 Sum_probs=206.4
Q ss_pred hcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEece----ecCCCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGA----CPEYGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~----~~~~~~l 464 (701)
.+.|..++.|++|.||.||+|++..+ -||+|.++.+.... +-...+||.+|.+++|||||.+-.+ .-+..||
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 34588899999999999999999654 49999998775322 2346899999999999999987554 3566799
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|||||+. +|..++.... .+|...+...++.|++.||.|||.+. |+||||||+|+|++..|.+||+||||||.+.
T Consensus 155 VMe~~Eh-DLksl~d~m~--q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 155 VMEYVEH-DLKSLMETMK--QPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eHHHHHh-hHHHHHHhcc--CCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhc
Confidence 9999975 7887775433 57999999999999999999999999 9999999999999999999999999999885
Q ss_pred CCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~ 623 (701)
... ..++..+.|+||+|||++.+. .|++.+|+||+|||+.||++++|.|.+..+.++.-. .|..+..|...
T Consensus 229 sp~------k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~--If~llGtPte~ 300 (419)
T KOG0663|consen 229 SPL------KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDK--IFKLLGTPSEA 300 (419)
T ss_pred CCc------ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHH--HHHHhCCCccc
Confidence 432 235778899999999987664 599999999999999999999999998877665433 11112222222
Q ss_pred CCCH-----------------H----------HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 624 GWPV-----------------E----------AALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~-----------------~----------~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.||. . ....-.+|+..+|.+||.+|.|+.+.|.|.|+.=
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 2210 0 1134578999999999999999999999999984
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.3e-42 Score=363.58 Aligned_cols=249 Identities=29% Similarity=0.394 Sum_probs=212.1
Q ss_pred cCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|.+.+.||+|+||.||||+.+.+. ||||.+.+.... ..+.+.+|++|++.++|||||.+++.|.. +.|+|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 56888899999999999999987664 999998776533 34568999999999999999999999954 5589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+.| +|..+|... ..++++.+..|+.+++.||.|||+++ |+|||+||.|||++.+|++|+||||+|+-+...
T Consensus 82 ~a~g-~L~~il~~d---~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQD---GKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN- 153 (808)
T ss_pred hhhh-hHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcccC-
Confidence 9966 999999543 45899999999999999999999999 999999999999999999999999999976432
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCH
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
....+..-||+.|||||+..+..|+..+|+||+|||||||++|+|||-.. .+.+.++. +...-..||.
T Consensus 154 -----t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-si~~Lv~~------I~~d~v~~p~ 221 (808)
T KOG0597|consen 154 -----TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-SITQLVKS------ILKDPVKPPS 221 (808)
T ss_pred -----ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-HHHHHHHH------HhcCCCCCcc
Confidence 22357788999999999999999999999999999999999999999533 22222221 1111235788
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.....+.+|+...|..||..|.+..+++.|+|-+=
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~ 256 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKG 256 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhh
Confidence 88889999999999999999999999999988774
No 22
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-41 Score=349.09 Aligned_cols=266 Identities=22% Similarity=0.303 Sum_probs=216.8
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~E 467 (701)
.+.|++...||.|.-+.||+|+. .+..||||++..+.... ...+.+|+..|+.++||||+.++..| .+..++||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46799999999999999999998 45669999998876544 47899999999999999999999887 455689999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
||.+||+.+.+...-. ..+.+..+..|+.+++.||.|||++| .||||||+.||||+.+|.|||+|||.+..+..+.
T Consensus 105 fMa~GS~ldIik~~~~-~Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYP-DGLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHcc-ccccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 9999999998865433 34899999999999999999999999 9999999999999999999999999987775544
Q ss_pred CcccccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCccCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPTVT 623 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~~~ 623 (701)
.....++.+.+||++|||||+++. ..|+.|+|||||||+.+||.+|..||.......-.+. ++.....+.....
T Consensus 181 --~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~ 258 (516)
T KOG0582|consen 181 --DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLD 258 (516)
T ss_pred --ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCC
Confidence 223334478899999999998433 4599999999999999999999999987665544333 2222211111110
Q ss_pred -CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 624 -GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 624 -~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+........+.+++..||..||+.||++.+++.|.||+...
T Consensus 259 ~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 259 KDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAK 300 (516)
T ss_pred hHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhcc
Confidence 01122344799999999999999999999999999999743
No 23
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=368.59 Aligned_cols=252 Identities=25% Similarity=0.293 Sum_probs=210.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCC---CChHHHHHHHHHHHhC-CCCcEEEEecee--cCCCc
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDIS---QGPRQFKQEVEILGSM-RHTNMVILLGAC--PEYGC 463 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~g~~--~~~~~ 463 (701)
..++|.+++.||+|+||+|+++.++++. +|||+++++.. ++.+....|-.|+... +||.++.|+..| .++.|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4578999999999999999999996654 99999998863 4456688899998877 499999999998 45679
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+.||++... .....|++.....++++|+.||.|||+++ |||||||.+|||||..|++||+|||||+-.
T Consensus 446 fvmey~~Ggdm~~~----~~~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHH----IHTDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEE----EecccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999994332 33456899999999999999999999999 999999999999999999999999999853
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCcc
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPT 621 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~ 621 (701)
- ......++.|||+.|||||++....|+..+|||||||+|||||.|.+||.++++-+ ..|... +
T Consensus 519 m------~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d------~-- 584 (694)
T KOG0694|consen 519 M------GQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVND------E-- 584 (694)
T ss_pred C------CCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcC------C--
Confidence 2 12234578999999999999999999999999999999999999999998776421 222211 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCCh-----hhhhhHHHHHHHhc
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDL-----VSVVLPELIRLRDL 665 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~l~~~ 665 (701)
.-+|...+.+...++.++|..+|+.|.-. .+|..|+||+--++
T Consensus 585 -~~yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w 632 (694)
T KOG0694|consen 585 -VRYPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDW 632 (694)
T ss_pred -CCCCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCH
Confidence 13556667779999999999999999875 67888888876554
No 24
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.6e-42 Score=332.68 Aligned_cols=249 Identities=29% Similarity=0.392 Sum_probs=210.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecCCC--ceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPEYG--CLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV 465 (701)
.++|++.+.||+|.||.||.|+.+.+. ||+|++-+.. .....++.+|++|.+.|+||||+++||+|.+.. ||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 356999999999999999999986554 9999986653 234567999999999999999999999996654 999
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+||..+|+|...|... ....+++.....++.|+|.||.|+|..+ +|||||||+|+|++..+.+||+|||.+...+
T Consensus 101 lEya~~gel~k~L~~~-~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG-RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP- 175 (281)
T ss_pred EEecCCchHHHHHHhc-ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC-
Confidence 9999999999988532 3445788888899999999999999999 9999999999999999999999999987543
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~ 623 (701)
..+..+.|||+.|++||...+..++..+|+|++|++.||+|.|.|||..... .-+.|..-. .
T Consensus 176 -------~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~---------~ 239 (281)
T KOG0580|consen 176 -------SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVD---------L 239 (281)
T ss_pred -------CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHcc---------c
Confidence 2245788999999999999999999999999999999999999999975542 222233222 1
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+|...+....++|.+|+..+|.+|..+.+++.|+|..-
T Consensus 240 ~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 240 KFPSTISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred cCCcccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 234555567899999999999999999999999999863
No 25
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=9.8e-41 Score=352.66 Aligned_cols=247 Identities=24% Similarity=0.312 Sum_probs=205.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~ 466 (701)
++|.+.+.||+|+||.||+|... ++.||+|++..... .....+.+|+.+++.++||||+++++++.+. .++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46899999999999999999985 66799999865422 2234588999999999999999999988543 47999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNS---GRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 999999999988543 35888999999999999999999999 999999999999999999999999999865321
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
....+||+.|+|||++.+..++.++|||||||++|+|+||++||...... ...+..+.. .
T Consensus 155 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------~ 216 (291)
T cd05612 155 ---------TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKL---------E 216 (291)
T ss_pred ---------cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc---------C
Confidence 12457999999999999989999999999999999999999999765432 222332221 2
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHHHh
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRLRD 664 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l~~ 664 (701)
+|......+.+++.+||..+|.+||+ +.+++.|+|+.--+
T Consensus 217 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~ 261 (291)
T cd05612 217 FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVD 261 (291)
T ss_pred CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCC
Confidence 33334556899999999999999995 99999999997433
No 26
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.7e-40 Score=347.04 Aligned_cols=252 Identities=23% Similarity=0.327 Sum_probs=202.7
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|+..+.||+|+||.||+|.+ .++.||+|++..... .....+.+|+.++..++||||+.+++.|.+ ..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 478899999999999999987 466799998865432 223457889999999999999999998844 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+.+.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05631 81 IMNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE 156 (285)
T ss_pred ecCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC
Confidence 999999988775432 346899999999999999999999999 9999999999999999999999999998753221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
......||..|+|||++.+..++.++|||||||+||+|++|++||...... ...+.... . .....+
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~----~~~~~~ 224 (285)
T cd05631 157 -------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRV-K----EDQEEY 224 (285)
T ss_pred -------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHh-h----cccccC
Confidence 123457999999999999999999999999999999999999999754321 11111100 0 001122
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRL 662 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l 662 (701)
+...+..+.+|+.+||+.+|.+||+ +.+++.|+|+.-
T Consensus 225 ~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~ 266 (285)
T cd05631 225 SEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKN 266 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence 3334556899999999999999997 899999999864
No 27
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-40 Score=361.72 Aligned_cols=247 Identities=25% Similarity=0.372 Sum_probs=212.5
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
+-|++++.||+|+.|.|.+|++. |+.+|||++.+.... ....+.+||-||+.+.|||++.||+.+.+ +.|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 45889999999999999999995 455999999776322 24458999999999999999999999965 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||++||-|.++|..++ +|++....+++.||+.|+.|+|..+ |+||||||+|+|||..+.+||+|||+|.+-.++
T Consensus 92 Eyv~gGELFdylv~kG---~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKG---PLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred EecCCchhHHHHHhhC---CCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 9999999999997664 5888999999999999999999999 999999999999999888999999999875433
Q ss_pred CCcccccccccccccCCCccCcccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGML-GVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~ 623 (701)
. ...+.||.+.|.+||+..+.+| +.++||||.|||||.||||+.||++++- +-.-+..|.|
T Consensus 166 k-------lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f--------- 229 (786)
T KOG0588|consen 166 K-------LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF--------- 229 (786)
T ss_pred c-------cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc---------
Confidence 2 3567899999999999999988 6799999999999999999999986542 2233445654
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..|.+.+.+.++|+.+|+..||..|.|+.+|+.|+|..=
T Consensus 230 ~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 230 EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 345666677899999999999999999999999999874
No 28
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-39 Score=336.61 Aligned_cols=265 Identities=26% Similarity=0.406 Sum_probs=217.7
Q ss_pred HhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--C-----hHHHHHHHHHHHhCCCCcEEEEecee---
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--G-----PRQFKQEVEILGSMRHTNMVILLGAC--- 458 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~-----~~~~~~Ei~il~~l~HpnIv~l~g~~--- 458 (701)
...++|-++.+||+|||+.||+|.+ .++.||+|+....... . .+...+|..|.+.|+||.||++|++|
T Consensus 460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD 539 (775)
T KOG1151|consen 460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD 539 (775)
T ss_pred chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence 3557899999999999999999987 5677999987654322 1 13367899999999999999999998
Q ss_pred cCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc---CCCcEEEE
Q 005343 459 PEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD---QNYVSKIS 535 (701)
Q Consensus 459 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~---~~~~~KL~ 535 (701)
.+.+|-|+|||+|.+|+-+|.++ ..+++.....|+.||+.||.||.... .||||-||||.||||- ..|.+||+
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQh---klmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQH---KLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred cccceeeeeecCCCchhHHHHhh---hhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCcccceeEee
Confidence 45679999999999999999554 35788999999999999999999877 5899999999999994 45889999
Q ss_pred eeccccccCCCCCcccccc-cccccccCCCccCcccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH
Q 005343 536 DVGLARLVPPSAADTITQY-HMTTAAGTFCYIDPEYQQTG----MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR 610 (701)
Q Consensus 536 DFGla~~~~~~~~~~~~~~-~~~~~~gt~~Y~aPE~~~~~----~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~ 610 (701)
||||++.++....+..... ..+..+||.||++||+|.-+ +.+.++||||+|||||++|.|+.|||.......++.
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHh
Confidence 9999999976654433332 24568999999999987655 478899999999999999999999999888777777
Q ss_pred cCccccccCccCCCCCH--HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 611 NGTFSELLDPTVTGWPV--EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 611 ~~~~~~~ld~~~~~~p~--~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.++ +......+|. ....+...||.+||+...++|.+..++-.++++.=
T Consensus 696 eNTI---lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP 746 (775)
T KOG1151|consen 696 ENTI---LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP 746 (775)
T ss_pred hhch---hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence 7664 3333334442 23445889999999999999999999988877754
No 29
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-41 Score=351.94 Aligned_cols=251 Identities=25% Similarity=0.354 Sum_probs=208.2
Q ss_pred cCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
..|...+.||+|.||.||+|.+..+ .||||++..+... ..+.+++|+.+|.+++++||..+||.+- ...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 3577788999999999999999654 4999999877643 4577999999999999999999999873 445899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|.||++.+.|. ....+.+..+..|+.+++.||.|||..+ .+|||||+.|||+..+|.+||+|||++..+..
T Consensus 93 ~~gGsv~~lL~---~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~--- 163 (467)
T KOG0201|consen 93 CGGGSVLDLLK---SGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTN--- 163 (467)
T ss_pred hcCcchhhhhc---cCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeec---
Confidence 99999999883 3344577777889999999999999999 99999999999999999999999999987632
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
+..+..+++||+.|||||+++...|+.++||||||++.+||++|.||+...+.+...+. +...-.|.+. ..
T Consensus 164 ---~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlfl---Ipk~~PP~L~---~~ 234 (467)
T KOG0201|consen 164 ---TVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFL---IPKSAPPRLD---GD 234 (467)
T ss_pred ---hhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEe---ccCCCCCccc---cc
Confidence 33344788999999999999988999999999999999999999999976654321111 1111112222 24
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
....|.+|+..||..+|+.||++.++|.|.|.+-
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~ 268 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKR 268 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHh
Confidence 5567999999999999999999999999998875
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-41 Score=359.77 Aligned_cols=235 Identities=26% Similarity=0.431 Sum_probs=199.9
Q ss_pred eeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEeecCCCChh
Q 005343 398 ISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEYMENGSLE 475 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey~~~gsL~ 475 (701)
.++.||.|+.|-||+|++.+..||||.++.-. ..+|.-|++|+||||+.|.|+|... +|||||||..|-|.
T Consensus 128 ELeWlGSGaQGAVF~Grl~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~ 200 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLHNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLY 200 (904)
T ss_pred hhhhhccCcccceeeeeccCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHH
Confidence 35679999999999999999999999775432 4578889999999999999999654 47999999999999
Q ss_pred hHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccccc
Q 005343 476 DRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYH 555 (701)
Q Consensus 476 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~ 555 (701)
++|.. ..+++......+..+||.|+.|||.++ |||||||+-||||..+..+||+|||-++....- ..
T Consensus 201 ~VLka---~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-------ST 267 (904)
T KOG4721|consen 201 EVLKA---GRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK-------ST 267 (904)
T ss_pred HHHhc---cCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh-------hh
Confidence 99943 346888888999999999999999999 999999999999999999999999998865321 12
Q ss_pred ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC-CCCCHHHHHHHH
Q 005343 556 MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV-TGWPVEAALSIA 634 (701)
Q Consensus 556 ~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~-~~~p~~~~~~l~ 634 (701)
+-.++||..|||||++.+.+.+.|+|||||||+|||||||..||..-+...-+|--|+ ..+ ...|..++.-|.
T Consensus 268 kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs------NsL~LpvPstcP~Gfk 341 (904)
T KOG4721|consen 268 KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS------NSLHLPVPSTCPDGFK 341 (904)
T ss_pred hhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC------CcccccCcccCchHHH
Confidence 4578999999999999999999999999999999999999999976554433333332 121 134667777899
Q ss_pred HHHHHhhccCcCCCCChhhhhhHH
Q 005343 635 KLALQCCELRKRDRPDLVSVVLPE 658 (701)
Q Consensus 635 ~li~~cl~~~P~~RPt~~~vl~~~ 658 (701)
-|+.+||+-.|++||++.+|+.|.
T Consensus 342 lL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 342 LLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred HHHHHHHhcCCCCCccHHHHHHHH
Confidence 999999999999999999999883
No 31
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=355.30 Aligned_cols=245 Identities=24% Similarity=0.316 Sum_probs=203.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|++. ++.||+|++..... .....+.+|+.+++.++||||+++++.+.+ ..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56999999999999999999984 55699999865421 234568899999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 98 e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKA---GRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 999999999988543 35788889999999999999999999 999999999999999999999999999866332
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
.....||+.|+|||++.+..++.++|||||||++|+|+||++||...... ...+..+.+ .
T Consensus 172 ---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~---------~ 233 (329)
T PTZ00263 172 ---------TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRL---------K 233 (329)
T ss_pred ---------cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCc---------C
Confidence 12357999999999999999999999999999999999999999765432 223333322 1
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l 662 (701)
+|......+.+|+.+||+.+|.+||+ +.+++.|+|++-
T Consensus 234 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 234 FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCC
Confidence 22223345889999999999999997 799999999863
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8.6e-40 Score=352.62 Aligned_cols=250 Identities=27% Similarity=0.418 Sum_probs=198.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-- 460 (701)
..++|.+.+.||+|+||.||+|.+. ++.||+|++...... ....+.+|+.+|..+ +||||+.++|+|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 4567999999999999999999752 245999998754322 235689999999999 89999999998854
Q ss_pred -CCceEEeecCCCChhhHhcccCC--------------------------------------------------------
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDN-------------------------------------------------------- 483 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------------- 483 (701)
..++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 34799999999999998864321
Q ss_pred ---CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccc
Q 005343 484 ---SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAA 560 (701)
Q Consensus 484 ---~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~ 560 (701)
..++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..... ........
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~----~~~~~~~~ 237 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVRKGSAR 237 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcc----hhcccCCC
Confidence 135888899999999999999999999 99999999999999999999999999986532211 11123345
Q ss_pred cCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch---HHHHHHHcCccccccCccCCCCCHHHHHHHHHH
Q 005343 561 GTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH---QVEQAIRNGTFSELLDPTVTGWPVEAALSIAKL 636 (701)
Q Consensus 561 gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~l 636 (701)
++..|+|||++.+..++.++|||||||+||||++ |.+||.... .....+..+... ..|...+..+.++
T Consensus 238 ~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~l 309 (338)
T cd05102 238 LPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRM--------RAPENATPEIYRI 309 (338)
T ss_pred CCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCC--------CCCCCCCHHHHHH
Confidence 6788999999999999999999999999999997 999997543 223333333211 1122334568999
Q ss_pred HHHhhccCcCCCCChhhhhh
Q 005343 637 ALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 637 i~~cl~~~P~~RPt~~~vl~ 656 (701)
+.+||+.+|.+||++.+++.
T Consensus 310 i~~cl~~dp~~RPs~~el~~ 329 (338)
T cd05102 310 MLACWQGDPKERPTFSALVE 329 (338)
T ss_pred HHHHccCChhhCcCHHHHHH
Confidence 99999999999999999873
No 33
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-40 Score=343.25 Aligned_cols=255 Identities=26% Similarity=0.383 Sum_probs=202.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--------------CChHHHHHHHHHHHhCCCCcEEEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--------------QGPRQFKQEVEILGSMRHTNMVILL 455 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--------------~~~~~~~~Ei~il~~l~HpnIv~l~ 455 (701)
..++|++...||+|.||.|-+|+. .++-||||++.+... ...+...+||.||++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 357899999999999999999998 566799999865421 1124689999999999999999999
Q ss_pred ceec----CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc
Q 005343 456 GACP----EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV 531 (701)
Q Consensus 456 g~~~----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~ 531 (701)
.+.. +..|||+|||..|.+... ....+.++..+.++|+.++..||.|||.+| ||||||||+|+||+.+|+
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCCCc
Confidence 8863 456999999998887542 233334999999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCchHHH-
Q 005343 532 SKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM----LGVKSDLYSLGVVLLQLITARPAMGLSHQVE- 606 (701)
Q Consensus 532 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDvwSlGvil~elltG~~pf~~~~~~~- 606 (701)
+||+|||.+..++.+. ...........+||+.|+|||...++. .+.+.||||+||+||.|+.|+-||-.....+
T Consensus 249 VKIsDFGVs~~~~~~~-~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l 327 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGS-DEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELEL 327 (576)
T ss_pred EEeeccceeeecccCC-ccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHH
Confidence 9999999998764432 112222345589999999999776633 4678999999999999999999997665432
Q ss_pred --HHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 607 --QAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 607 --~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.++.+. +.-| ..| +....+.+||.++|..||..|.++.+|.+|+|--
T Consensus 328 ~~KIvn~p----L~fP---~~p-e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt 376 (576)
T KOG0585|consen 328 FDKIVNDP----LEFP---ENP-EINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVT 376 (576)
T ss_pred HHHHhcCc----ccCC---Ccc-cccHHHHHHHHHHhhcChhheeehhhheecceec
Confidence 222211 1111 111 3455699999999999999999999999999965
No 34
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-39 Score=348.97 Aligned_cols=260 Identities=23% Similarity=0.327 Sum_probs=205.3
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.++|++.+.||+|+||.||++++. +..||+|++...... ....+.+|+++|+.++||||+++++++.+ ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 468999999999999999999985 455999998765322 23568999999999999999999999844 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQN-KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
|+++|+|.+++... ..+++..+..++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++..+...
T Consensus 84 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKEA---KRIPEEILGKVSIAVLRGLAYLREKHQ---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 99999999988543 3588999999999999999999985 5 999999999999999999999999998765322
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCcccc--------
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSE-------- 616 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~-------- 616 (701)
......||+.|+|||++.+..++.++|||||||++|+|+||+.||..... ....+.......
T Consensus 158 --------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (331)
T cd06649 158 --------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSI 229 (331)
T ss_pred --------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCcccc
Confidence 12345799999999999999999999999999999999999999965432 211111100000
Q ss_pred ------------------------------ccCccCCCCC-HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 617 ------------------------------LLDPTVTGWP-VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 617 ------------------------------~ld~~~~~~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
+........+ ......+.+|+.+||..+|++||++.+++.|+|++-...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~~ 309 (331)
T cd06649 230 SPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSEV 309 (331)
T ss_pred CcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhccc
Confidence 0000000000 123456899999999999999999999999999986554
Q ss_pred c
Q 005343 666 G 666 (701)
Q Consensus 666 ~ 666 (701)
.
T Consensus 310 ~ 310 (331)
T cd06649 310 E 310 (331)
T ss_pred c
Confidence 3
No 35
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.5e-40 Score=353.66 Aligned_cols=253 Identities=24% Similarity=0.295 Sum_probs=204.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|++. +..||||++..... .....+.+|+.++..++||||+++++++.+ ..|+||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46999999999999999999984 56799999875431 234568899999999999999999998854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNL---GVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 999999999998543 35888999999999999999999999 99999999999999999999999999976532
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~ 624 (701)
.....+||+.|+|||++.+..++.++|||||||++|+|++|++||......+. .+..... .+..+....
T Consensus 154 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~ 224 (333)
T cd05600 154 --------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE-TLQRPVYDD 224 (333)
T ss_pred --------ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc-cccCCCCCc
Confidence 22456799999999999999999999999999999999999999976543222 2221110 011111111
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.....+..+.+++.+||..+|.+||++.+++.|+|+.-
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~ 262 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKE 262 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCC
Confidence 01123456899999999999999999999999998863
No 36
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.5e-39 Score=343.64 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=198.7
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.++|.+.+.||+|+||.||+|... ++.||||++...... ....+.+|+.+++.++||||+++++++.+ ..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999984 567999998765432 23467889999999999999999999844 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+. ++|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 157 (303)
T cd07869 84 YVH-TDLCQYMDKH--PGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVPS 157 (303)
T ss_pred CCC-cCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCCC
Confidence 995 6887777543 245788899999999999999999999 9999999999999999999999999987543211
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc-----Ccccc-----
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN-----GTFSE----- 616 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~-----~~~~~----- 616 (701)
.......||+.|+|||++.+ ..++.++|||||||++|+|+||++||.........+.. +....
T Consensus 158 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (303)
T cd07869 158 ------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPG 231 (303)
T ss_pred ------ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccc
Confidence 11244578999999998765 45899999999999999999999999765432221110 00000
Q ss_pred -----ccCcc-CCC-CCH---------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 617 -----LLDPT-VTG-WPV---------EAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 617 -----~ld~~-~~~-~p~---------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
..++. ... .+. .....+.+|+.+||+.+|++|||+.+++.|+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~ 292 (303)
T cd07869 232 VHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS 292 (303)
T ss_pred hhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence 00000 000 000 0123578999999999999999999999999986
No 37
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.5e-39 Score=348.21 Aligned_cols=258 Identities=24% Similarity=0.319 Sum_probs=198.3
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-------CCc
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE-------YGC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~ 463 (701)
+|.+.+.||+|+||.||+|.+. +..||||.+..... .....+.+|+.+++.++||||+++++++.. ..|
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4889999999999999999984 56699999875322 234568899999999999999999998721 248
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+ +++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~-~~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~ 153 (338)
T cd07859 81 VVFELM-ESDLHQVIKAN---DDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARVA 153 (338)
T ss_pred EEEecC-CCCHHHHHHhc---ccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCcccccc
Confidence 999999 57898887432 35899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCcccccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-------------
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA------------- 608 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~------------- 608 (701)
..... .........||+.|+|||++.+ ..++.++|||||||++|+|+||++||.........
T Consensus 154 ~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 154 FNDTP---TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred ccccC---ccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 32211 1112245679999999998876 67899999999999999999999999755432110
Q ss_pred ----HHcCccccccC----ccCCCC---CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 609 ----IRNGTFSELLD----PTVTGW---PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 609 ----i~~~~~~~~ld----~~~~~~---p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+........+. .....+ ....+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 00000000000 000000 0012345789999999999999999999999999974
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.2e-40 Score=354.16 Aligned_cols=242 Identities=24% Similarity=0.287 Sum_probs=197.8
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 472 (701)
+.||+|+||.||+|.. .+..||||++..... .....+.+|+.+++.++||||+.+++.|.+ ..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999998 456699999875432 223457889999999999999999998854 448999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~------ 148 (323)
T cd05571 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISD------ 148 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccC------
Confidence 999888543 46889999999999999999999999 999999999999999999999999998753211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
.......+||+.|+|||++.+..++.++|||||||++|||+||++||...+.. ...+..+. ..+|...+
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~ 219 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE---------IRFPRTLS 219 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC---------CCCCCCCC
Confidence 11224567999999999999999999999999999999999999999655432 12222221 12333445
Q ss_pred HHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
..+.+++.+||..+|++|| ++.+++.|+|+.-
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~ 256 (323)
T cd05571 220 PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFAS 256 (323)
T ss_pred HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 5689999999999999999 8999999999753
No 39
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-39 Score=335.44 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=207.3
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCc-EEEEeceecC--------
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTN-MVILLGACPE-------- 460 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~Hpn-Iv~l~g~~~~-------- 460 (701)
..|..+++||+|+||+||+|+.. +..||+|.+..+... .+....+|+.+|+.++|+| ||.|++++..
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 44777788999999999999984 556999998877543 4566899999999999999 9999999843
Q ss_pred CCceEEeecCCCChhhHhcccCCC-CCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNS-PPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++|+||+ .-+|..++...... ..++...+..++.||+.||+|||+++ |+||||||+|||++++|.+||+|||+
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 236899999 46899988654422 35677889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCcccccc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELL 618 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~l 618 (701)
|+-+.-. ....+..++|.||+|||++.+. .|+..+||||+|||++||+++++.|.+..+.++...- |.-+.
T Consensus 167 Ara~~ip------~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~I--f~~lG 238 (323)
T KOG0594|consen 167 ARAFSIP------MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRI--FRLLG 238 (323)
T ss_pred HHHhcCC------cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHH--HHHcC
Confidence 9965422 1225778999999999988776 6999999999999999999999999988877665541 11111
Q ss_pred CccCCCCCH----------------------HHH---HHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 619 DPTVTGWPV----------------------EAA---LSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 619 d~~~~~~p~----------------------~~~---~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.|....||. ..+ ....+++.+||+.+|..|.++..+|.|+++.-
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 222222211 001 25789999999999999999999999998874
No 40
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.9e-39 Score=341.15 Aligned_cols=256 Identities=25% Similarity=0.325 Sum_probs=200.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|.+.+.||+|+||.||+|++. +..||+|++..... .....+.+|+.+++.++||||++++++|.+ ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46999999999999999999985 45699999876532 234568899999999999999999999854 4489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|++++++..+. . ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~~~l~~~~-~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 154 (287)
T cd07848 81 YVEKNMLELLE-E--MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS 154 (287)
T ss_pred cCCCCHHHHHH-h--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCcccccccc
Confidence 99987776543 2 2245889999999999999999999999 9999999999999999999999999998764321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cc----------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GT---------- 613 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~---------- 613 (701)
. .......||+.|+|||++.+..++.++|||||||++|+|++|++||............ +.
T Consensus 155 ~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07848 155 N-----ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFY 229 (287)
T ss_pred c-----ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhh
Confidence 1 1123457899999999999888999999999999999999999999765432221110 00
Q ss_pred ----cccccCccCC-------CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 ----FSELLDPTVT-------GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 ----~~~~ld~~~~-------~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+.....+... .+....+..+.+|+.+||+.+|++||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 230 SNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred ccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 0000000000 0011234569999999999999999999999999885
No 41
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4.7e-39 Score=338.80 Aligned_cols=240 Identities=20% Similarity=0.293 Sum_probs=196.4
Q ss_pred eeeeecCceeEEEEEECCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC------CCceEEeecC
Q 005343 400 RKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE------YGCLVYEYME 470 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~------~~~lV~Ey~~ 470 (701)
..||+|++|.||+|.++++.||||++....... .+.|.+|+.+|.+++||||++++|+|.+ ..++||||++
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~ 105 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCT 105 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCC
Confidence 579999999999999999999999998764433 3568899999999999999999999855 3479999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQN-KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
+|+|.+++... ..+++.....++.+++.||.|||+. + ++||||||+|||++.++.+||+|||+++.+...
T Consensus 106 ~g~L~~~l~~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 106 RGYLREVLDKE---KDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCcHHHHHhhC---CCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 99999998543 3588999999999999999999985 6 889999999999999999999999999865321
Q ss_pred ccccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
.....||..|+|||++.. ..++.++|||||||++|||+||+.||...... ...+..+... ...
T Consensus 177 ------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~-------~~~ 243 (283)
T PHA02988 177 ------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNS-------LKL 243 (283)
T ss_pred ------cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCC-------CCC
Confidence 123468899999999876 67999999999999999999999999765422 2222211111 112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
|..++..+.+++.+||+.+|.+||++.+++ +.|..+
T Consensus 244 ~~~~~~~l~~li~~cl~~dp~~Rps~~ell-~~l~~~ 279 (283)
T PHA02988 244 PLDCPLEIKCIVEACTSHDSIKRPNIKEIL-YNLSLY 279 (283)
T ss_pred CCcCcHHHHHHHHHHhcCCcccCcCHHHHH-HHHHHH
Confidence 334456799999999999999999999996 444444
No 42
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=354.90 Aligned_cols=246 Identities=25% Similarity=0.308 Sum_probs=203.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECC---ceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecCC--Cce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH---TSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~---~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~l 464 (701)
.++|.+.+.||+|+||.||+|.+.+ ..||+|++.... ......+.+|+.+++.++||||++++++|.+. .|+
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3569999999999999999998743 359999886532 22345688999999999999999999998554 489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 109 v~Ey~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~ 182 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRN---KRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVVD 182 (340)
T ss_pred EEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeecC
Confidence 99999999999988543 35889999999999999999999999 9999999999999999999999999998653
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTV 622 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~ 622 (701)
.. ....+||+.|+|||++.+..++.++|||||||++|+|+||++||...+.. ...+..+..
T Consensus 183 ~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~-------- 245 (340)
T PTZ00426 183 TR---------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII-------- 245 (340)
T ss_pred CC---------cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------
Confidence 21 13457999999999999989999999999999999999999999766542 222333321
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
.+|...+..+.+++.+||+.+|.+|+ ++.+++.|+|++-
T Consensus 246 -~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~ 289 (340)
T PTZ00426 246 -YFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGN 289 (340)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 12333344588999999999999995 8999999999863
No 43
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=334.25 Aligned_cols=272 Identities=24% Similarity=0.318 Sum_probs=207.1
Q ss_pred CceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec----C---CCceE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP----E---YGCLV 465 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~----~---~~~lV 465 (701)
.|...+++|.|+||.||+|.... ..||||..-.+.. --.+|++||+.++|||||.|.-+|. . ..+||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 47888999999999999999854 4699998765542 2368999999999999999988772 1 22689
Q ss_pred EeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC-CcEEEEeecccccc
Q 005343 466 YEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN-YVSKISDVGLARLV 543 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~-~~~KL~DFGla~~~ 543 (701)
||||+. +|..++... .....++.-.+.-+..||++||.|||+.+ |+||||||.|+|+|.+ |.+||||||.|+.+
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999964 788877542 22345666777789999999999999999 9999999999999975 99999999999988
Q ss_pred CCCCCcccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH------------
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR------------ 610 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~------------ 610 (701)
.++... .+...|..|+|||.+. ...|+.++||||.|||+.||+-|+|.|.+.+.+.+...
T Consensus 177 ~~~epn-------iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 177 VKGEPN-------ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRED 249 (364)
T ss_pred ccCCCc-------eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHH
Confidence 655432 3456789999999655 45699999999999999999999999988776555432
Q ss_pred ----cCccccccCccCC-----C-CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccccccCCCCCcccC
Q 005343 611 ----NGTFSELLDPTVT-----G-WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDNIVVT 680 (701)
Q Consensus 611 ----~~~~~~~ld~~~~-----~-~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~~~~~~~~~~~~ 680 (701)
+.+..+...|.+. . +....+.++.+|+.++|..+|.+|.+..+++.|+++...... .....++.+.
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~----~~~l~~g~~l 325 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP----NTKLPNGRPL 325 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc----CccCcCCCcC
Confidence 1111122222221 1 233456679999999999999999999999999988742221 2223344466
Q ss_pred CCCCC
Q 005343 681 PGPYN 685 (701)
Q Consensus 681 ~~~~~ 685 (701)
|+-++
T Consensus 326 p~lf~ 330 (364)
T KOG0658|consen 326 PPLFN 330 (364)
T ss_pred CCccC
Confidence 66554
No 44
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.5e-39 Score=339.62 Aligned_cols=254 Identities=26% Similarity=0.372 Sum_probs=196.7
Q ss_pred CceeeeeeeecCceeEEEEEEC---CceEEEEEeCCCCCC--ChHHHHHHHHHHHhC---CCCcEEEEeceec-------
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD---HTSVAIKVLGPDISQ--GPRQFKQEVEILGSM---RHTNMVILLGACP------- 459 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~---~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l---~HpnIv~l~g~~~------- 459 (701)
+|.+.+.||+|+||.||+|.+. ++.||+|++...... ....+.+|+.+++.+ +||||++++++|.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 6889999999999999999873 456999988755422 234567788887766 6999999999873
Q ss_pred CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 460 EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 460 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
...++||||+. ++|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Dfg~ 156 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVP-EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGL 156 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccccc
Confidence 23479999995 68988885433 345889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHcC----
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRNG---- 612 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~~---- 612 (701)
++..... .......||+.|+|||.+....++.++|||||||++|+|++|++||......... +...
T Consensus 157 ~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~ 229 (290)
T cd07862 157 ARIYSFQ-------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 229 (290)
T ss_pred eEeccCC-------cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 9865432 1224567899999999998889999999999999999999999999866543221 1100
Q ss_pred --cccc-------ccCccCC----CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 --TFSE-------LLDPTVT----GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 --~~~~-------~ld~~~~----~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+.. .+.+... .+....+..+.+++.+||+.+|++||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence 0000 0000000 0011233457899999999999999999999999885
No 45
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.7e-39 Score=339.18 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=197.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey 468 (701)
++|.+.+.||.|+||.||+|... +..||+|++..... .....+.+|+.+++.++||||+++++++.+. .++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56999999999999999999984 45699999875432 2345678999999999999999999998554 4799999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
++ |+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~- 157 (288)
T cd07871 85 LD-SDLKQYLDNCG--NLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT- 157 (288)
T ss_pred CC-cCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC-
Confidence 97 58988875432 35788899999999999999999999 9999999999999999999999999997643211
Q ss_pred cccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HH-cC-----------
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IR-NG----------- 612 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~-~~----------- 612 (701)
.......||+.|+|||++.+ ..++.++|||||||++|+|+||++||......+.. +. .+
T Consensus 158 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07871 158 -----KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT 232 (288)
T ss_pred -----ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence 11244578999999998765 56899999999999999999999999765422111 10 00
Q ss_pred ---ccccccCccCCCCC-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 ---TFSELLDPTVTGWP-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 ---~~~~~ld~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+...+.+.....+ ......+.+|+.+||..+|.+|||+.+++.|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence 01111111110000 1123457899999999999999999999999985
No 46
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-40 Score=337.53 Aligned_cols=260 Identities=25% Similarity=0.323 Sum_probs=206.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeC--CCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLG--PDISQGPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~--~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
....|..++.||+|+||.|..+.+. +..||||.+. .......+...+|+.+|+.++|+||+.+++.+..
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4566777899999999999999984 5569999887 3444456778999999999999999999998732
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..|+|+|+| +.+|...+.. ...|+......++.|++.||.|+|+.+ |+||||||+|+|++.+..+||+|||||
T Consensus 100 DvYiV~elM-etDL~~iik~---~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKS---QQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHH-hhHHHHHHHc---CccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence 238999999 6788888733 345899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----cCcc-
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR----NGTF- 614 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~----~~~~- 614 (701)
+..+.. .....++..+.|.||+|||++. ...|+..+||||.||||.|||+|+|.|.+.+.+.+.-. -|+.
T Consensus 173 R~~~~~----~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~ 248 (359)
T KOG0660|consen 173 RYLDKF----FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPS 248 (359)
T ss_pred eecccc----CcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCC
Confidence 988543 2233457889999999999754 56799999999999999999999999988765544321 0110
Q ss_pred ------------cccc--CccCCCCC-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 615 ------------SELL--DPTVTGWP-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 615 ------------~~~l--d~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...+ -|.....| ........+|+.+||..||.+|+|+.+.|.|+...-
T Consensus 249 ~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~ 315 (359)
T KOG0660|consen 249 EEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP 315 (359)
T ss_pred HHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence 0000 01111111 123345789999999999999999999999998874
No 47
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.7e-39 Score=361.62 Aligned_cols=253 Identities=22% Similarity=0.297 Sum_probs=206.0
Q ss_pred CceeeeeeeecCceeEEEEEEC---CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD---HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~---~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
.|.+.+.||+|+||.||+|... +..|++|.+..........+.+|+.+|+.++||||++++++|.+ ..||||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4999999999999999999873 44588887755443334557889999999999999999999843 458999999
Q ss_pred CCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 470 ENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 470 ~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
++|+|.+++... ....++++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999988543 33456889999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p 626 (701)
.......+||+.|+|||++.+..++.++|||||||++|+|+||++||....... ..+..+... ..|
T Consensus 225 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~--------~~~ 292 (478)
T PTZ00267 225 ----LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD--------PFP 292 (478)
T ss_pred ----cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC--------CCC
Confidence 112345679999999999999999999999999999999999999997654321 222222221 122
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...+..+.+++.+||..+|..||++.+++.++|.+.
T Consensus 293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 293 CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 334456899999999999999999999999988764
No 48
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-39 Score=335.62 Aligned_cols=247 Identities=26% Similarity=0.381 Sum_probs=212.6
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCCh---HHHHHHHHHHHhCCCCcEEEEeceecCC--CceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGP---RQFKQEVEILGSMRHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~---~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV 465 (701)
..+|++.+.||+|.||.|-+|+. .++.||||.++++...+. -.+.+||+||+.|+||||+.+|.+|.+. ..||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35688899999999999999986 677899999988765543 4589999999999999999999999654 4799
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||..+|.|.||+... ..|++.....++.||..|+.|+|.++ ++|||||.+|||||.|+.+||+||||+.++..
T Consensus 132 MEYaS~GeLYDYiSer---~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~~ 205 (668)
T KOG0611|consen 132 MEYASGGELYDYISER---GSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYAD 205 (668)
T ss_pred EEecCCccHHHHHHHh---ccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhcc
Confidence 9999999999999554 35899999999999999999999999 99999999999999999999999999988743
Q ss_pred CCCcccccccccccccCCCccCcccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGML-GVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
. ....++||++-|.+||+..+.+| ++.+|-|||||+||.|+.|..||++.+. +-..|..|.+.+-
T Consensus 206 ~-------kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP----- 273 (668)
T KOG0611|consen 206 K-------KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP----- 273 (668)
T ss_pred c-------cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC-----
Confidence 3 23578999999999999999887 7899999999999999999999987653 3344556665442
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..|. ...-||.+||-.+|.+|-|+.+|-.|.|...
T Consensus 274 -~~PS----dA~gLIRwmLmVNP~RRATieDiAsHWWvNw 308 (668)
T KOG0611|consen 274 -ETPS----DASGLIRWMLMVNPERRATIEDIASHWWVNW 308 (668)
T ss_pred -CCCc----hHHHHHHHHHhcCcccchhHHHHhhhheeec
Confidence 2222 2578999999999999999999999999865
No 49
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-39 Score=348.98 Aligned_cols=241 Identities=24% Similarity=0.304 Sum_probs=196.3
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 472 (701)
+.||+|+||.||++.. .+..||+|++..... .....+.+|+.+++.++||||+.+++.|.. ..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999997 456799999876432 233457789999999999999999998844 458999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~----- 149 (323)
T cd05595 81 ELFFHLSRE---RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG----- 149 (323)
T ss_pred cHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC-----
Confidence 998888443 35889999999999999999999999 9999999999999999999999999987532211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
.......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+... ..+..+.. .+|...+
T Consensus 150 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~---------~~p~~~~ 219 (323)
T cd05595 150 -ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI---------RFPRTLS 219 (323)
T ss_pred -CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC---------CCCCCCC
Confidence 11234679999999999999999999999999999999999999996554321 12221111 2233445
Q ss_pred HHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRP-----DLVSVVLPELIR 661 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~ 661 (701)
..+.+++.+||..+|.+|| ++.+++.|.|+.
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~ 255 (323)
T cd05595 220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255 (323)
T ss_pred HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence 5689999999999999998 899999998775
No 50
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.8e-39 Score=345.09 Aligned_cols=240 Identities=23% Similarity=0.246 Sum_probs=195.9
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||+|+||.||+|.+. +..||+|++.... ......+.+|+.++..++||||+++++.|.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999985 4569999986532 2234567889999999999999999998854 45899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------~ 148 (312)
T cd05585 81 FHHLQRE---GRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD------D 148 (312)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC------C
Confidence 9988543 35889999999999999999999999 9999999999999999999999999997542211 1
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
.....+||+.|+|||++.+..++.++|||||||++|+|+||++||....... ..+..+. ..+|...+..
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 219 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP---------LRFPDGFDRD 219 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC---------CCCCCcCCHH
Confidence 1245679999999999999999999999999999999999999997654322 1111111 1233344556
Q ss_pred HHHHHHHhhccCcCCCC---ChhhhhhHHHHHH
Q 005343 633 IAKLALQCCELRKRDRP---DLVSVVLPELIRL 662 (701)
Q Consensus 633 l~~li~~cl~~~P~~RP---t~~~vl~~~~~~l 662 (701)
+.+++.+||..+|.+|| ++.+++.|+|+.-
T Consensus 220 ~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~ 252 (312)
T cd05585 220 AKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQ 252 (312)
T ss_pred HHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCC
Confidence 89999999999999997 4789999999764
No 51
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2e-38 Score=338.94 Aligned_cols=279 Identities=22% Similarity=0.337 Sum_probs=210.5
Q ss_pred cCceeeeeeeecCceeEEEEEEC--Cc----eEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HT----SVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~----~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV 465 (701)
.+|++.+.||+|+||.||+|.+. +. .||+|++..... .....+.+|+.+++.++||||++++|+|.. ..++|
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v 86 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 86 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceee
Confidence 45899999999999999999872 22 389999875432 234568899999999999999999999854 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 87 TQLMPFGCLLDYVREHK--DNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eecCCCCCHHHHHHhcc--ccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999986543 35788899999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
... ........++..|++||++....++.++|||||||++|||+| |++||..... ....+..+...
T Consensus 162 ~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~------- 230 (316)
T cd05108 162 DEK----EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL------- 230 (316)
T ss_pred CCc----ceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCC-------
Confidence 221 111223345678999999999999999999999999999998 9999975432 23333332211
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccccccCCCCCcccCCCCCCChhhh
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDNIVVTPGPYNSVSEM 690 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (701)
..+..+...+.+++.+||..+|.+||++.+++.+ +.++..................|+|..++.+.
T Consensus 231 -~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (316)
T cd05108 231 -PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE-FSKMARDPQRYLVIQGDERMHLPSPTDSNFYR 296 (316)
T ss_pred -CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH-HHHHHcCCchheEecCCcccCCCCCchhHHHh
Confidence 1122234468999999999999999999999865 44443332222222222333445555544443
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.9e-39 Score=353.61 Aligned_cols=257 Identities=24% Similarity=0.284 Sum_probs=201.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|++. ++.||||++.... ......+.+|+.+|..++||||+++++.|.+ ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47999999999999999999984 5679999987542 1223457889999999999999999999854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~~g~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKK---DTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 999999999988543 35899999999999999999999999 999999999999999999999999999765321
Q ss_pred CCccc--------------------------------ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh
Q 005343 547 AADTI--------------------------------TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT 594 (701)
Q Consensus 547 ~~~~~--------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt 594 (701)
..... ........+||+.|+|||++....++.++|||||||++|+|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10000 0001123579999999999999999999999999999999999
Q ss_pred CCCCCCCchHHHHH--HHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHH
Q 005343 595 ARPAMGLSHQVEQA--IRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRL 662 (701)
Q Consensus 595 G~~pf~~~~~~~~~--i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l 662 (701)
|++||......... +..... .+..+... ..+..+.+++.+|+. +|.+|++ +.+++.|+|++-
T Consensus 235 G~~Pf~~~~~~~~~~~i~~~~~-~~~~~~~~----~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 235 GYPPFCSDNPQETYRKIINWKE-TLQFPDEV----PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred CCCCCCCCCHHHHHHHHHcCCC-ccCCCCCC----CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 99999766543222 211110 01111111 123457899999996 9999998 999999998754
No 53
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=3e-39 Score=349.79 Aligned_cols=258 Identities=24% Similarity=0.301 Sum_probs=205.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|++. +..||||++..... .....+..|+.++..++||||+++++++.+ ..|+||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47999999999999999999985 66799999875431 234568899999999999999999998854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999998654 46889999999999999999999999 999999999999999999999999999876433
Q ss_pred CCc-----------------------ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch
Q 005343 547 AAD-----------------------TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH 603 (701)
Q Consensus 547 ~~~-----------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 603 (701)
... ...........||+.|+|||++.+..++.++|||||||+||+|++|++||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 200 000112345679999999999999999999999999999999999999997665
Q ss_pred HHHHHHHcCcc-ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC-hhhhhhHHHHHH
Q 005343 604 QVEQAIRNGTF-SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD-LVSVVLPELIRL 662 (701)
Q Consensus 604 ~~~~~i~~~~~-~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt-~~~vl~~~~~~l 662 (701)
..........+ ..+..+.... .+..+.+++.+|+. +|.+||+ +.+++.|+|++-
T Consensus 235 ~~~~~~~i~~~~~~~~~p~~~~----~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 235 LQETYNKIINWKESLRFPPDPP----VSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHHHhccCCcccCCCCCC----CCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 33222111111 0011111111 34568999999997 9999999 999999999863
No 54
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4e-39 Score=350.00 Aligned_cols=248 Identities=25% Similarity=0.380 Sum_probs=193.6
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
|...++||+|+||.||+|++. ++.||||++...... ....+.+|+++++.++||||++++++|.+ ..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 455678999999999999984 567999998654322 23568999999999999999999999854 3479999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+.. .+.+..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 156 ~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 222 (353)
T PLN00034 156 GGSLEGTH-------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM--- 222 (353)
T ss_pred CCcccccc-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc---
Confidence 99986532 2456777889999999999999999 9999999999999999999999999998764221
Q ss_pred cccccccccccCCCccCcccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCC
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQT-----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~ 623 (701)
.......||..|+|||++.. ...+.++|||||||++|||++|+.||..... .......... ....
T Consensus 223 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-----~~~~ 294 (353)
T PLN00034 223 ---DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICM-----SQPP 294 (353)
T ss_pred ---ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhc-----cCCC
Confidence 11244579999999998743 2345789999999999999999999974321 1111111000 0011
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
..+......+.+|+.+||..+|.+||++.+++.|+|+.-..
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCC
Confidence 12233445689999999999999999999999999988643
No 55
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=2.4e-39 Score=348.32 Aligned_cols=241 Identities=24% Similarity=0.303 Sum_probs=196.4
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 472 (701)
+.||+|+||.||++... +..||+|++..... .....+.+|+.+++.++||||+.+++.+.+ ..|+||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999984 56799999876432 234567889999999999999999988844 458999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~------ 148 (328)
T cd05593 81 ELFFHLSRE---RVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITD------ 148 (328)
T ss_pred CHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCc------
Confidence 999888443 45889999999999999999999999 999999999999999999999999998753211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
.......+||+.|+|||++.+..++.++|||||||++|+|+||++||....... ..+..+. ..+|...+
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~---------~~~p~~~~ 219 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED---------IKFPRTLS 219 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC---------ccCCCCCC
Confidence 112244679999999999999999999999999999999999999996554321 1111111 12333444
Q ss_pred HHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRP-----DLVSVVLPELIR 661 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~ 661 (701)
..+.+++.+||..+|.+|| ++.+++.|+|+.
T Consensus 220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~ 255 (328)
T cd05593 220 ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFT 255 (328)
T ss_pred HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcC
Confidence 5689999999999999997 899999998874
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-39 Score=347.30 Aligned_cols=252 Identities=27% Similarity=0.404 Sum_probs=213.0
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceecCCC---ceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACPEYG---CLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~---~lV~ 466 (701)
++|..++.||+|+||.++.+++ +++.+++|.+....... .+...+|+.++++++|||||.+.+.|.+.. ||||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 5788999999999999998887 55679999987766443 335899999999999999999999995543 7999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
+|++||+|.+.+.+.. ...|+++.+..++.|++.|+.|||++. |+|||||+.|||++.++.+||+|||+|+.+.+.
T Consensus 84 ~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~ 159 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE 159 (426)
T ss_pred eecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence 9999999999986654 556999999999999999999999988 999999999999999999999999999988654
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p 626 (701)
. ....+.+||+.|++||++.+.+|+.|+|||||||++|||++-+++|...+...-... ..... ....|
T Consensus 160 ~------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~k--i~~~~----~~Plp 227 (426)
T KOG0589|consen 160 D------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILK--INRGL----YSPLP 227 (426)
T ss_pred h------hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHH--Hhhcc----CCCCC
Confidence 2 124678999999999999999999999999999999999999999987764332222 11111 22344
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.....+|..++..|+..+|..||++.++|.++...
T Consensus 228 ~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~ 262 (426)
T KOG0589|consen 228 SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLL 262 (426)
T ss_pred ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence 55666799999999999999999999999886555
No 57
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.9e-38 Score=359.25 Aligned_cols=259 Identities=22% Similarity=0.312 Sum_probs=209.8
Q ss_pred HHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC----
Q 005343 389 IEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE---- 460 (701)
Q Consensus 389 i~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---- 460 (701)
.....++|.+.+.||+|+||.||+|.+ .+..||||++...... ....+.+|+.++..++|+||+.+.+.+..
T Consensus 27 ~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~ 106 (496)
T PTZ00283 27 AKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR 106 (496)
T ss_pred ccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence 334567999999999999999999987 5677999998765422 23458899999999999999998876521
Q ss_pred ------CCceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEE
Q 005343 461 ------YGCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSK 533 (701)
Q Consensus 461 ------~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~K 533 (701)
..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+|
T Consensus 107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCEE
Confidence 136899999999999988653 23456899999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHc
Q 005343 534 ISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRN 611 (701)
Q Consensus 534 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~ 611 (701)
|+|||+++.+..... .......+||+.|+|||++.+..++.++|||||||+||||++|++||....... ..+..
T Consensus 184 L~DFGls~~~~~~~~----~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~ 259 (496)
T PTZ00283 184 LGDFGFSKMYAATVS----DDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA 259 (496)
T ss_pred EEecccCeecccccc----ccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence 999999987643211 112245679999999999999999999999999999999999999997654322 22222
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.+ ...|...+..+.+++.+||..+|.+||++.+++.|+|.+.
T Consensus 260 ~~~--------~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 260 GRY--------DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred CCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 222 1123344556899999999999999999999999998775
No 58
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=351.56 Aligned_cols=264 Identities=26% Similarity=0.461 Sum_probs=211.4
Q ss_pred HHHHHhhcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceecCC-Cc
Q 005343 387 EEIEAATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACPEY-GC 463 (701)
Q Consensus 387 ~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~~-~~ 463 (701)
++++...+.+.+...||+|.||+||+|.|-| .||||+++.+.... .+.|++|+..+++-+|.||+.++|+|-.. ..
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~A 463 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLA 463 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCcee
Confidence 5666677778889999999999999999865 59999998776433 45699999999999999999999999543 37
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+|..+|+|-+|..+|+-.. ..|...+.+.|+.||++|+.|||.++ |||||||+.||||.+++.|||+||||+..-
T Consensus 464 IiTqwCeGsSLY~hlHv~e--tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQE--TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred eeehhccCchhhhhccchh--hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999986543 56888999999999999999999999 999999999999999999999999998542
Q ss_pred CCCCCcccccccccccccCCCccCcccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH-HHcCccccccC
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQT---GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA-IRNGTFSELLD 619 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~-i~~~~~~~~ld 619 (701)
..- .........-|...|||||++.. .+|+..+|||||||++|||+||..||...+ .+++ +..|.- .+-
T Consensus 539 ~~w----~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~dqIifmVGrG--~l~ 611 (678)
T KOG0193|consen 539 TRW----SGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-RDQIIFMVGRG--YLM 611 (678)
T ss_pred eee----ccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-hhheEEEeccc--ccC
Confidence 111 11122345568889999997653 468999999999999999999999998333 2332 233322 222
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
+.+.....+++.++.+|+..||..++++||.+.+|+......++
T Consensus 612 pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 612 PDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred ccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 33333345677789999999999999999999999865444443
No 59
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-38 Score=335.79 Aligned_cols=255 Identities=25% Similarity=0.333 Sum_probs=204.8
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~E 467 (701)
+|++.+.||+|+||.||++.+. ++.||+|++...... ....+.+|+.+++.++||||+.+++.+. +..|+|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4888999999999999999984 567999998654322 2345778999999999999999999884 34689999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.++|+|||++..+....
T Consensus 81 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNM-GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999887543 2346899999999999999999999999 9999999999999999999999999998653221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~ 625 (701)
......|++.|+|||++.+..++.++|||||||++|+|++|+.||....... ..+... + .......
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~-~----~~~~~~~ 224 (285)
T cd05605 157 -------TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR-V----KEDQEEY 224 (285)
T ss_pred -------ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH-h----hhccccc
Confidence 1234578999999999998899999999999999999999999997643211 111111 0 0111123
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHhc
Q 005343 626 PVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRDL 665 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~~ 665 (701)
+...+..+.+++.+||..+|.+|| ++.+++.|+|+.-.++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05605 225 SEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANF 269 (285)
T ss_pred CcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCH
Confidence 334455689999999999999999 8889999999875443
No 60
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.4e-38 Score=347.10 Aligned_cols=258 Identities=22% Similarity=0.279 Sum_probs=197.3
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~ 466 (701)
++|++.+.||+|+||.||+|... ++.||||++..... .....+.+|+.++..++||||+++++.+.+. .|+||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47999999999999999999984 55699999875421 2234578899999999999999999998554 48999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKK---DTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 999999999998543 45889999999999999999999999 999999999999999999999999999865321
Q ss_pred CCcc-----------------------------cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 005343 547 AADT-----------------------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARP 597 (701)
Q Consensus 547 ~~~~-----------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~ 597 (701)
.... .........+||+.|+|||++.+..++.++|||||||+||||++|++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 1000 00001134689999999999999999999999999999999999999
Q ss_pred CCCCchHHH--HHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhc--cCcCCCCChhhhhhHHHHHH
Q 005343 598 AMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCE--LRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 598 pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~--~~P~~RPt~~~vl~~~~~~l 662 (701)
||....... ..+...... +..+.... ....+.+++.+++. .++..||++.+|+.|+|++-
T Consensus 235 Pf~~~~~~~~~~~i~~~~~~-~~~p~~~~----~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 235 PFCSETPQETYKKVMNWKET-LIFPPEVP----ISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred CCCCCCHHHHHHHHHcCcCc-ccCCCcCC----CCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCC
Confidence 997654332 222221111 11111111 22346777776543 23335799999999998763
No 61
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.9e-38 Score=336.90 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=194.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECC------------------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH------------------TSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVI 453 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~------------------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~ 453 (701)
.++|.+.++||+|+||.||+|.+++ ..||+|++....... ...|.+|+.+|.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578999999999999999998632 249999987654322 346899999999999999999
Q ss_pred EeceecC--CCceEEeecCCCChhhHhcccC----------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCee
Q 005343 454 LLGACPE--YGCLVYEYMENGSLEDRLFQKD----------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLV 515 (701)
Q Consensus 454 l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ii 515 (701)
++|+|.+ ..++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+.+ |+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---iv 160 (304)
T cd05096 84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FV 160 (304)
T ss_pred EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---cc
Confidence 9999854 4589999999999999885431 1235788899999999999999999999 99
Q ss_pred ecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-
Q 005343 516 HRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT- 594 (701)
Q Consensus 516 HrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt- 594 (701)
||||||+|||++.++.+||+|||+++.+..... ........++..|+|||++..+.++.++|||||||++|+|++
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~ 236 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY----YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILML 236 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce----eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHc
Confidence 999999999999999999999999986533211 111234456889999999988899999999999999999997
Q ss_pred -CCCCCCCchHHHH--HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 595 -ARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 595 -G~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
|..||........ .... .+...........|..++..+.+++.+||..+|.+||++.+|.
T Consensus 237 ~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~ 299 (304)
T cd05096 237 CKEQPYGELTDEQVIENAGE-FFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH 299 (304)
T ss_pred cCCCCCCcCCHHHHHHHHHH-HhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence 4567764332111 1110 0000000001112233445689999999999999999999995
No 62
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.4e-39 Score=351.28 Aligned_cols=260 Identities=22% Similarity=0.284 Sum_probs=200.6
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
+.|++++.||+|+||.||+|+.. ++.||||++.... ......+.+|+++|..++||||+++++.|.+ ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 46999999999999999999984 4569999986532 1224558899999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..++......++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+...
T Consensus 81 E~~~~g~L~~~i~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~ 154 (376)
T cd05598 81 DYIPGGDMMSLLIRL---GIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (376)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCcccccc
Confidence 999999999998543 35788888899999999999999999 999999999999999999999999998533110
Q ss_pred CCcc-------------------------------------cccccccccccCCCccCcccccCCCCCchhhHHHHHHHH
Q 005343 547 AADT-------------------------------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVL 589 (701)
Q Consensus 547 ~~~~-------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil 589 (701)
.... .........+||+.|+|||++.+..++.++|||||||+|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil 234 (376)
T cd05598 155 HDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234 (376)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeecccee
Confidence 0000 000011245799999999999999999999999999999
Q ss_pred HHHHhCCCCCCCchHHHHHHHcCccccc-cCccCCCCCHHHHHHHHHHHHHhhccCcCCCC---ChhhhhhHHHHHHHh
Q 005343 590 LQLITARPAMGLSHQVEQAIRNGTFSEL-LDPTVTGWPVEAALSIAKLALQCCELRKRDRP---DLVSVVLPELIRLRD 664 (701)
Q Consensus 590 ~elltG~~pf~~~~~~~~~i~~~~~~~~-ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RP---t~~~vl~~~~~~l~~ 664 (701)
|+|+||++||.................. ..+.. ...+..+.+++.+|+ .+|.+|| ++.+++.|+|++-.+
T Consensus 235 yell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~----~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~ 308 (376)
T cd05598 235 YEMLVGQPPFLADTPAETQLKVINWETTLHIPSQ----AKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID 308 (376)
T ss_pred eehhhCCCCCCCCCHHHHHHHHhccCccccCCCC----CCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence 9999999999876543322221111111 11111 123345778888876 4999999 999999999987533
No 63
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-38 Score=349.47 Aligned_cols=259 Identities=21% Similarity=0.270 Sum_probs=198.0
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|.+++.||+|+||.||+|++. +..||||++..... .....+.+|+.+++.++||||+++++.|.+ ..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 6899999999999999999984 45699999875432 223468899999999999999999999854 4489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+++... ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+....
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRM---EVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 99999999988543 35788888999999999999999999 9999999999999999999999999986432110
Q ss_pred Cccc-----------------------------------------ccccccccccCCCccCcccccCCCCCchhhHHHHH
Q 005343 548 ADTI-----------------------------------------TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLG 586 (701)
Q Consensus 548 ~~~~-----------------------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlG 586 (701)
.... ........+||+.|+|||++....++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0000 00011245799999999999988999999999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHH--hhccCcCCCCChhhhhhHHHHHH
Q 005343 587 VVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQ--CCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 587 vil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~--cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
|++|||+||++||.................. ..... .......+.+++.+ |+..+|..||++.+++.|+|+.-
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i~~~~~~--~~~~~-~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKVINWENT--LHIPP-QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHHHccccc--cCCCC-CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 9999999999999765543222211110000 00111 11223457888887 44556666999999999999864
No 64
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=7.2e-39 Score=351.71 Aligned_cols=260 Identities=22% Similarity=0.288 Sum_probs=199.9
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|.+++.||+|+||.||+|+.. +..||+|++..... .....+.+|+.+++.++||||+++++.|.+ ..|+|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 6899999999999999999984 45699999875422 123458899999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+++.+. ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 82 ~~~gg~L~~~l~~~---~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRM---GIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 99999999988543 35788888999999999999999999 9999999999999999999999999986432100
Q ss_pred Ccc-----------------------------------------cccccccccccCCCccCcccccCCCCCchhhHHHHH
Q 005343 548 ADT-----------------------------------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLG 586 (701)
Q Consensus 548 ~~~-----------------------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlG 586 (701)
... .........+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 000 000011245799999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCchHHHHHHHcCcccc-ccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHH
Q 005343 587 VVLLQLITARPAMGLSHQVEQAIRNGTFSE-LLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRL 662 (701)
Q Consensus 587 vil~elltG~~pf~~~~~~~~~i~~~~~~~-~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l 662 (701)
|+||||+||++||................. ...+.. ......+.+++.+|+ .+|.+|++ +.+++.|+|++-
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~----~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQ----AKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCc----ccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 999999999999987654333222111110 111111 122345678887776 49999997 999999999875
Q ss_pred Hhc
Q 005343 663 RDL 665 (701)
Q Consensus 663 ~~~ 665 (701)
.++
T Consensus 311 ~~~ 313 (382)
T cd05625 311 IDF 313 (382)
T ss_pred cCh
Confidence 443
No 65
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.1e-38 Score=354.38 Aligned_cols=255 Identities=22% Similarity=0.336 Sum_probs=195.8
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC----------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE---------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---------- 460 (701)
..+|.+.+.||+|+||.||+|.+. +..||||++.... ....+|+.+|+.++||||+++++++..
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 467999999999999999999984 4569999885432 335679999999999999999887521
Q ss_pred CCceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC-CcEEEEeec
Q 005343 461 YGCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN-YVSKISDVG 538 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~-~~~KL~DFG 538 (701)
..++||||++ ++|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DFG 216 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDFG 216 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeeccc
Confidence 1358999996 4676666432 23456899999999999999999999999 9999999999999865 479999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----cC-
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR----NG- 612 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~----~~- 612 (701)
+|+.+.... ......||+.|+|||++.+ ..|+.++|||||||+||||+||++||........... .+
T Consensus 217 la~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~ 289 (440)
T PTZ00036 217 SAKNLLAGQ-------RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGT 289 (440)
T ss_pred cchhccCCC-------CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 998764321 1234578999999998765 4699999999999999999999999976643322211 01
Q ss_pred -----------ccccccCccCC------CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 613 -----------TFSELLDPTVT------GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 613 -----------~~~~~ld~~~~------~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+..+..+... .+|...+..+.+|+.+||..+|.+||++.+++.|+|+.-
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD 356 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence 01111001110 112223456899999999999999999999999999863
No 66
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.2e-38 Score=340.26 Aligned_cols=258 Identities=24% Similarity=0.347 Sum_probs=202.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.++|++.++||+|+||.||++.+. +..+|+|++...... ....+.+|+++++.++||||++++++|.+ ..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 467999999999999999999985 456899988765322 23568999999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQN-KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
|+++|+|.+++... ..+++.....++.|++.||.|||+. + |+||||||+|||++.++.+||+|||++..+...
T Consensus 84 ~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKKA---GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 99999999988543 3578889999999999999999975 6 999999999999999999999999998765321
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHH---cCccccc----
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIR---NGTFSEL---- 617 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~---~~~~~~~---- 617 (701)
. .....||..|+|||++.+..++.++|||||||++|+|++|+.||...... ...+. .+.....
T Consensus 158 ~--------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd06650 158 M--------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSP 229 (333)
T ss_pred c--------cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCc
Confidence 1 13457899999999999889999999999999999999999999754321 11110 0000000
Q ss_pred -----------------------------cCccCCCCCH-HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 618 -----------------------------LDPTVTGWPV-EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 618 -----------------------------ld~~~~~~p~-~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
........+. ....++.+|+.+||+.+|.+||++.+++.|+|++...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 230 RPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred ccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 0000000000 1234588999999999999999999999999998643
No 67
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.5e-39 Score=350.51 Aligned_cols=258 Identities=22% Similarity=0.280 Sum_probs=197.9
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||++.. .+..||||++.... ......+.+|+++++.++||||++++++|.+ ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 4689999999999999999988 45569999986532 1223568889999999999999999999854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~---~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKY---DTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999988543 45888899999999999999999999 999999999999999999999999999643211
Q ss_pred CCcc----------cc-------------------------------cccccccccCCCccCcccccCCCCCchhhHHHH
Q 005343 547 AADT----------IT-------------------------------QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSL 585 (701)
Q Consensus 547 ~~~~----------~~-------------------------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSl 585 (701)
.... .. .......+||+.|+|||++....++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 0000 00 000113579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCC---CChhhhhhHHHHH
Q 005343 586 GVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDR---PDLVSVVLPELIR 661 (701)
Q Consensus 586 Gvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~R---Pt~~~vl~~~~~~ 661 (701)
||+||||+||++||..............+...+ .+... ......+.+++.+||. +|.+| |++.+++.|+|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~--~~p~~-~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~ 309 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHETYRKIINWRETL--YFPDD-IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFR 309 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHHHHHHHccCCcc--CCCCC-CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcC
Confidence 999999999999997655432211111111100 01110 1233468899999997 66665 6999999999875
No 68
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.1e-39 Score=363.94 Aligned_cols=247 Identities=32% Similarity=0.559 Sum_probs=208.1
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 462 (701)
..+-...+.||+|.||+||+|+..+ +-||||.++..... ...+|++|+++|..|+|||||+|+|+|.+ ..
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~ 564 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPL 564 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCee
Confidence 3455677899999999999998632 34999999887755 45679999999999999999999999954 45
Q ss_pred ceEEeecCCCChhhHhcccC-------C----CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc
Q 005343 463 CLVYEYMENGSLEDRLFQKD-------N----SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV 531 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~-------~----~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~ 531 (701)
|+|+|||..|||.++|.... . .++|+..+.+.||.|||.|+.||-++. +|||||-..|+|+..+..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceE
Confidence 99999999999999996432 1 234889999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCccccccccc-ccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCC-Cc-hHHHH
Q 005343 532 SKISDVGLARLVPPSAADTITQYHMT-TAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMG-LS-HQVEQ 607 (701)
Q Consensus 532 ~KL~DFGla~~~~~~~~~~~~~~~~~-~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~-~~-~~~~~ 607 (701)
|||+||||++.+-.. ..|+.. ...-...||+||.+..++++++||||||||+|||++| |+.|+. .. .++-+
T Consensus 642 VKIsDfGLsRdiYss-----DYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe 716 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSS-----DYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIE 716 (774)
T ss_pred EEecccccchhhhhh-----hhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHH
Confidence 999999999865221 223322 3445678999999999999999999999999999998 777764 33 36777
Q ss_pred HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 608 AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 608 ~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+++|.+ -..|.+++.++..|+..||+..|++||++.+|=
T Consensus 717 ~i~~g~l--------L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 717 CIRAGQL--------LSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred HHHcCCc--------ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 7888764 256778888899999999999999999999984
No 69
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-38 Score=347.43 Aligned_cols=251 Identities=23% Similarity=0.316 Sum_probs=194.8
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
.++|.+.+.||+|+||.||+|.+. +..||+|... ...+.+|+++|+.++||||++++++|. ...|+||||
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 356999999999999999999984 4569999643 235789999999999999999999884 345899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+ +++|..++... ..+++..+..|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 165 ~-~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~-- 235 (391)
T PHA03212 165 Y-KTDLYCYLAAK---RNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDI-- 235 (391)
T ss_pred C-CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCcccccccc--
Confidence 9 57888887443 35789999999999999999999999 999999999999999999999999999754221
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch----------HHHHHHH-cCcccc-
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH----------QVEQAIR-NGTFSE- 616 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~----------~~~~~i~-~~~~~~- 616 (701)
........+||+.|+|||++....++.++|||||||+||+|+||++||-... .....+. .|....
T Consensus 236 ---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~ 312 (391)
T PHA03212 236 ---NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNE 312 (391)
T ss_pred ---cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhh
Confidence 1112345689999999999999999999999999999999999997653211 1111111 010000
Q ss_pred --------------------ccCcc-CCCCC--HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 617 --------------------LLDPT-VTGWP--VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 617 --------------------~ld~~-~~~~p--~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
...+. ...|. ...+..+.+|+.+||+.+|.+||++.++|.|+|++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 313 FPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred cCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 00000 01111 12345689999999999999999999999999985
No 70
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-39 Score=348.17 Aligned_cols=241 Identities=24% Similarity=0.297 Sum_probs=195.1
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 472 (701)
+.||+|+||.||++.. .+..||+|++..... .....+..|+.++..++||||+.+++.+.+ ..|+||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999997 455699999876432 223457889999999999999999988844 448999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
+|.+++... ..+++..+..++.||+.||.|||+ .+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~L~~~l~~~---~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~---- 150 (325)
T cd05594 81 ELFFHLSRE---RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---- 150 (325)
T ss_pred cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC----
Confidence 999887443 358899999999999999999997 67 9999999999999999999999999987542211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......||+.|+|||++.+..++.++|||||||+||+|+||+.||...... ...+..+.+ .+|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~---------~~p~~~ 219 (325)
T cd05594 151 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI---------RFPRTL 219 (325)
T ss_pred --cccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCC---------CCCCCC
Confidence 1123457999999999999999999999999999999999999999655431 222222111 122333
Q ss_pred HHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRP-----DLVSVVLPELIR 661 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~ 661 (701)
...+.+++.+||+.+|++|| ++.+++.|+|+.
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~ 256 (325)
T cd05594 220 SPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFA 256 (325)
T ss_pred CHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcC
Confidence 45689999999999999996 899999999876
No 71
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.1e-38 Score=340.22 Aligned_cols=247 Identities=23% Similarity=0.284 Sum_probs=198.5
Q ss_pred CceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCC-cEEEEeceec--CCCceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHT-NMVILLGACP--EYGCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~Hp-nIv~l~g~~~--~~~~lV~ 466 (701)
+|.+.+.||+|+||.||+|...+ ..||||++.... ......+..|+.++..+.|+ +|+.+++.+. +..|+||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 48899999999999999999854 469999987642 23345678899999999775 5777887774 3458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQV---GKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 999999999888543 35788999999999999999999999 999999999999999999999999998743211
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
. ......+||+.|+|||++.+..++.++|||||||++|+|+||++||...... ...+.... ..
T Consensus 155 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~---------~~ 219 (324)
T cd05587 155 G------KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN---------VS 219 (324)
T ss_pred C------CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------CC
Confidence 1 1123457999999999999999999999999999999999999999765432 22222221 12
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCCh-----hhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDL-----VSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~l 662 (701)
+|...+..+.+++.+||..+|.+||+. .+++.|+|++-
T Consensus 220 ~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~ 262 (324)
T cd05587 220 YPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRR 262 (324)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCC
Confidence 233344568999999999999999987 78888887653
No 72
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.8e-38 Score=341.66 Aligned_cols=248 Identities=23% Similarity=0.315 Sum_probs=198.2
Q ss_pred CceeeeeeeecCceeEEEEEE-----CCceEEEEEeCCCC----CCChHHHHHHHHHHHhC-CCCcEEEEeceecCC--C
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-----DHTSVAIKVLGPDI----SQGPRQFKQEVEILGSM-RHTNMVILLGACPEY--G 462 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~ 462 (701)
+|++.+.||+|+||.||+++. .+..||+|++.... ......+..|+.++..+ +||||+.+++.+.+. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 488999999999999999986 35669999986532 12234578899999999 599999999888543 4
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQR---DNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 7999999999999988543 35889999999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHcCccc
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSH------QVEQAIRNGTFS 615 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~------~~~~~i~~~~~~ 615 (701)
+..... ......+||+.|+|||++.+. .++.++|||||||+||+|+||+.||.... .+...+...
T Consensus 155 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~--- 226 (332)
T cd05614 155 FLSEEK-----ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKC--- 226 (332)
T ss_pred ccccCC-----CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcC---
Confidence 532211 112346799999999998765 47899999999999999999999996432 111111111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
++ ..+...+..+.+++.+||..+|.+|| ++.+++.|+|++-
T Consensus 227 ---~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 227 ---DP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred ---CC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence 11 22233445689999999999999999 7889999998764
No 73
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.8e-38 Score=340.64 Aligned_cols=245 Identities=24% Similarity=0.284 Sum_probs=197.1
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHH---HhCCCCcEEEEeceecC--CCceE
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEIL---GSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il---~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
|++.+.||+|+||.||+|.+. ++.||||++.... ......+.+|+.++ +.++||||+++++++.+ ..|+|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 678999999999999999984 5669999987542 12234566776665 56789999999998844 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++|+|...+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHT----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 999999999887732 35899999999999999999999999 99999999999999999999999999875322
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~ 623 (701)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|++||...... ...+..+..
T Consensus 154 ~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--------- 218 (324)
T cd05589 154 F------GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--------- 218 (324)
T ss_pred C------CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------
Confidence 1 11234567999999999999999999999999999999999999999765432 222222221
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
.+|...+..+.+++.+||..+|.+|| ++.+++.|+|++-
T Consensus 219 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 219 RYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRD 262 (324)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCC
Confidence 12333445689999999999999999 6888999888753
No 74
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.6e-38 Score=332.18 Aligned_cols=247 Identities=25% Similarity=0.339 Sum_probs=197.7
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||+|+||.||++.+. +..||+|.+...... ....+..|+.+++.++||||+.+.+++.. ..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999884 557999998654322 23457889999999999999999988744 45899999999999
Q ss_pred hhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccc
Q 005343 475 EDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQ 553 (701)
Q Consensus 475 ~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~ 553 (701)
.+.+... .....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~----- 152 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS----- 152 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-----
Confidence 8887543 23456899999999999999999999999 99999999999999999999999999976643211
Q ss_pred ccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHHHH
Q 005343 554 YHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 554 ~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
......||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+....+ .. ...++...+.
T Consensus 153 -~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~----~~-~~~~~~~~~~ 226 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRIL----ND-SVTYPDKFSP 226 (280)
T ss_pred -cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhc----cc-CCCCcccCCH
Confidence 123457899999999999999999999999999999999999999754321 111111111 11 1123344556
Q ss_pred HHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 632 SIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
.+.+++.+||+.+|.+|| ++.+++.|+|++-
T Consensus 227 ~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~ 262 (280)
T cd05608 227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRD 262 (280)
T ss_pred HHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhc
Confidence 789999999999999999 7789999999974
No 75
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=8.3e-39 Score=342.88 Aligned_cols=242 Identities=24% Similarity=0.312 Sum_probs=196.3
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+. ++.||||++.... ......+..|+.++..+ +||||+++++++.+ ..|+||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999984 5569999987542 22345577899998876 69999999998854 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~---~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---- 150 (320)
T cd05590 81 GDLMFHIQKS---RRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG---- 150 (320)
T ss_pred chHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC----
Confidence 9999888543 35889999999999999999999999 9999999999999999999999999987542211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......||+.|+|||++.+..++.++|||||||++|+|++|++||...+.. ...+..+.. ..|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (320)
T cd05590 151 --KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV---------VYPTWL 219 (320)
T ss_pred --CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC---------CCCCCC
Confidence 1224567999999999999999999999999999999999999999766532 222322221 122223
Q ss_pred HHHHHHHHHHhhccCcCCCCCh------hhhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDL------VSVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~------~~vl~~~~~~l 662 (701)
+..+.+++.+||+.+|.+||+. .+++.|+|++-
T Consensus 220 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~ 258 (320)
T cd05590 220 SQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKE 258 (320)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCC
Confidence 4568999999999999999998 88999999864
No 76
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-38 Score=341.69 Aligned_cols=242 Identities=27% Similarity=0.360 Sum_probs=196.5
Q ss_pred eeeeecCceeEEEEEE-----CCceEEEEEeCCCC----CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 400 RKIGEGGYGPVYKAQL-----DHTSVAIKVLGPDI----SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+.||+|+||.||+++. .++.||+|++.... ......+..|+.+|+.++||||+++++.|.+ ..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999986 35569999987532 1223457889999999999999999998854 34899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 154 (323)
T cd05584 82 LSGGELFMHLERE---GIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG- 154 (323)
T ss_pred CCCchHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-
Confidence 9999999988543 35778888889999999999999999 9999999999999999999999999987542211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p 626 (701)
.......||+.|+|||++.+..++.++|||||||+||+|++|++||...+... ..+..+.+ ..|
T Consensus 155 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~---------~~~ 220 (323)
T cd05584 155 -----TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL---------NLP 220 (323)
T ss_pred -----CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------CCC
Confidence 11234579999999999999889999999999999999999999997665332 22222221 223
Q ss_pred HHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRL 662 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l 662 (701)
...+..+.+++.+||..+|.+|| ++.+++.|+|++-
T Consensus 221 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~ 261 (323)
T cd05584 221 PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRH 261 (323)
T ss_pred CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCC
Confidence 33345689999999999999999 8999999998753
No 77
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.8e-38 Score=341.02 Aligned_cols=255 Identities=22% Similarity=0.293 Sum_probs=198.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
..++|.+.+.||+|+||.||++.+. +..||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999884 56699999875432 234568899999999999999999998732
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..|+||||+.+ +|...+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg~ 169 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 169 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh-----ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCCC
Confidence 24899999965 5665552 23788888999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HH------
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IR------ 610 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~------ 610 (701)
++..... .......||+.|+|||++.+..++.++|||||||++|+|+||++||...+..... +.
T Consensus 170 a~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 242 (359)
T cd07876 170 ARTACTN-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 242 (359)
T ss_pred ccccccC-------ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence 9754321 1224457899999999999999999999999999999999999999755432111 00
Q ss_pred ----------------c-Cccccc-cCccCCCC--------CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 611 ----------------N-GTFSEL-LDPTVTGW--------PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 611 ----------------~-~~~~~~-ld~~~~~~--------p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
. ..+... +......| +......+.+|+.+||..+|++||++.+++.|+|+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 243 AEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 0 000000 00000011 1112345899999999999999999999999999974
No 78
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=6e-38 Score=329.65 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=195.9
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhC---CCCcEEEEeceecC-------
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSM---RHTNMVILLGACPE------- 460 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l---~HpnIv~l~g~~~~------- 460 (701)
+|.+.+.||+|+||.||+|.+. ++.||+|.+...... ....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4889999999999999999985 456999998764322 234567788887766 79999999998742
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..++||||+. ++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP-PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCcc
Confidence 2479999996 58888775432 345899999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HHHc-C----
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ---AIRN-G---- 612 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~---~i~~-~---- 612 (701)
+.+.... ......||..|+|||++.+..++.++|||||||++|+|++|++||........ .+.. +
T Consensus 156 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07863 156 RIYSCQM-------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228 (288)
T ss_pred ccccCcc-------cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCCh
Confidence 8764221 12345789999999999988999999999999999999999999976543221 1110 0
Q ss_pred -cccc-------ccCccC----CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 -TFSE-------LLDPTV----TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 -~~~~-------~ld~~~----~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+.. ...+.. ..+.......+.+++.+||+.||.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0000 000000 00111234457899999999999999999999999885
No 79
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.7e-38 Score=355.25 Aligned_cols=257 Identities=21% Similarity=0.279 Sum_probs=195.7
Q ss_pred HHHhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCC------cEEEEeceecC
Q 005343 389 IEAATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHT------NMVILLGACPE 460 (701)
Q Consensus 389 i~~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hp------nIv~l~g~~~~ 460 (701)
+....++|.+.++||+|+||.||+|.+. +..||||+++... .....+..|+.++..++|. +++.++++|..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3445788999999999999999999884 4569999986432 2334567788888777654 58888888743
Q ss_pred ---CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCC------
Q 005343 461 ---YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNY------ 530 (701)
Q Consensus 461 ---~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~------ 530 (701)
..|+||+++ +++|.+++.+. ..+++..+..|+.||+.||.|||+ .+ ||||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~~~~~ 275 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKH---GPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTVVDPV 275 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcccccc
Confidence 358999988 78898888543 368999999999999999999997 58 99999999999998765
Q ss_pred ----------cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005343 531 ----------VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 531 ----------~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 600 (701)
.+||+|||++..... .....+||+.|+|||++.+..|+.++|||||||+||||+||++||.
T Consensus 276 ~~~~~~~~~~~vkl~DfG~~~~~~~---------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 276 TNRALPPDPCRVRICDLGGCCDERH---------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccCCCCceEEECCCCccccCcc---------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 499999998764321 1245689999999999999999999999999999999999999997
Q ss_pred CchHHHHH--HH--cCcccc-------------c------cCccCC-----------CCC-HHHHHHHHHHHHHhhccCc
Q 005343 601 LSHQVEQA--IR--NGTFSE-------------L------LDPTVT-----------GWP-VEAALSIAKLALQCCELRK 645 (701)
Q Consensus 601 ~~~~~~~~--i~--~~~~~~-------------~------ld~~~~-----------~~p-~~~~~~l~~li~~cl~~~P 645 (701)
..+..+.. +. .|.+.. + +.+... .+. ......+.+|+.+||..||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 65432211 10 011100 0 000000 000 0112347899999999999
Q ss_pred CCCCChhhhhhHHHHHH
Q 005343 646 RDRPDLVSVVLPELIRL 662 (701)
Q Consensus 646 ~~RPt~~~vl~~~~~~l 662 (701)
.+||++.++|.|+|+.-
T Consensus 427 ~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 427 QKRLNARQMTTHPYVLK 443 (467)
T ss_pred hhCCCHHHHhcCccccc
Confidence 99999999999999974
No 80
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-38 Score=341.00 Aligned_cols=247 Identities=23% Similarity=0.277 Sum_probs=199.2
Q ss_pred CceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCC---CChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDIS---QGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 466 (701)
+|.+.+.||+|+||.||+|.+.+ ..||||++..... .....+..|..++..+ +||+|+.+++.+.+ ..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 48899999999999999999854 4699999876432 2234567788888777 58889999888744 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQV---GRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 999999999888543 35889999999999999999999999 999999999999999999999999999754221
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
. ......+||+.|+|||++....++.++|||||||++|+|+||++||...+.. ...+..+. ..
T Consensus 155 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~---------~~ 219 (323)
T cd05616 155 G------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN---------VA 219 (323)
T ss_pred C------CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCC---------CC
Confidence 1 1124567999999999999999999999999999999999999999765432 22222222 12
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCCh-----hhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDL-----VSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~l 662 (701)
+|...+..+.+++.+||+.+|.+|++. .+++.|+|++.
T Consensus 220 ~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~ 262 (323)
T cd05616 220 YPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRY 262 (323)
T ss_pred CCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCC
Confidence 333445568999999999999999985 78888877754
No 81
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2e-38 Score=346.80 Aligned_cols=254 Identities=24% Similarity=0.288 Sum_probs=201.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecCC--Cce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~l 464 (701)
..++|.+.+.||+|+||.||++... +..||+|++.... ......+.+|+.+++.++||||+.+++++.+. .++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3467999999999999999999984 5569999986532 12334578899999999999999999988543 489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++.. ..++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.
T Consensus 121 v~Ey~~gg~L~~~l~~----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSN----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 9999999999998843 24778888899999999999999999 9999999999999999999999999998654
Q ss_pred CCCCcccccccccccccCCCccCcccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCcccccc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTG----MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELL 618 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~l 618 (701)
... .......+||+.|+|||++... .++.++|||||||+||+|++|++||........ .+..+.. .+.
T Consensus 194 ~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~-~~~ 267 (370)
T cd05596 194 ANG-----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKN-SLT 267 (370)
T ss_pred CCC-----cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-cCC
Confidence 321 1122456799999999987653 478999999999999999999999986654322 1211110 011
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCC--CCChhhhhhHHHHHH
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRD--RPDLVSVVLPELIRL 662 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~--RPt~~~vl~~~~~~l 662 (701)
.+ .. ...+..+.+++.+||..+|.+ ||++.+++.|+|++-
T Consensus 268 ~~---~~-~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~ 309 (370)
T cd05596 268 FP---DD-IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKN 309 (370)
T ss_pred CC---Cc-CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCC
Confidence 11 11 123456899999999999988 999999999999864
No 82
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.2e-38 Score=337.72 Aligned_cols=242 Identities=24% Similarity=0.289 Sum_probs=192.5
Q ss_pred eeeeecCceeEEEEEECC--ceEEEEEeCCCC---CCChHHHHHHHHHHHh-CCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLDH--TSVAIKVLGPDI---SQGPRQFKQEVEILGS-MRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~---~~~~~~~~~Ei~il~~-l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+.+ ..||+|+++... ......+..|..++.. .+||||+++++++.. ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 369999999999999854 459999987643 2233456667777765 489999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---- 150 (316)
T cd05592 81 GDLMFHIQSS---GRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC----
Confidence 9999888543 35888999999999999999999999 9999999999999999999999999997642211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+... ..+.... ...|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (316)
T cd05592 151 --GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR---------PHFPRWI 219 (316)
T ss_pred --CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------CCCCCCC
Confidence 12245679999999999999999999999999999999999999997654322 1222111 1223334
Q ss_pred HHHHHHHHHHhhccCcCCCCChh-hhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDLV-SVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~-~vl~~~~~~l 662 (701)
+..+.+++.+||..+|.+||++. +++.|+|++-
T Consensus 220 ~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~ 253 (316)
T cd05592 220 SKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRG 253 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCcccCC
Confidence 45688999999999999999975 7778887653
No 83
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.4e-38 Score=339.31 Aligned_cols=242 Identities=25% Similarity=0.327 Sum_probs=196.1
Q ss_pred eeeeecCceeEEEEEECC--ceEEEEEeCCCC---CCChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLDH--TSVAIKVLGPDI---SQGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|++.+ +.||+|++.... ......+..|..++..+ +||||+.++++|.+ ..|+||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 369999999999999854 569999987642 22334577899999866 89999999999854 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+.+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~---- 150 (321)
T cd05591 81 GDLMFQIQRS---RKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG---- 150 (321)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC----
Confidence 9999888543 35888999999999999999999999 9999999999999999999999999987542211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......||+.|+|||++.+..++.++|||||||++|+|+||++||...+... ..+..+.. ..|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~---------~~p~~~ 219 (321)
T cd05591 151 --VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV---------LYPVWL 219 (321)
T ss_pred --ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCC
Confidence 12245679999999999999999999999999999999999999997665322 22222211 122223
Q ss_pred HHHHHHHHHHhhccCcCCCC-------ChhhhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRP-------DLVSVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RP-------t~~~vl~~~~~~l 662 (701)
+..+.+++.+||..+|.+|| ++.+++.|+|+.-
T Consensus 220 ~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~ 259 (321)
T cd05591 220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKE 259 (321)
T ss_pred CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCC
Confidence 45689999999999999999 8999999998754
No 84
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-37 Score=323.40 Aligned_cols=254 Identities=22% Similarity=0.354 Sum_probs=203.4
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCCh---------HHHHHHHHHHHhCCCCcEEEEeceecC--C
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGP---------RQFKQEVEILGSMRHTNMVILLGACPE--Y 461 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~---------~~~~~Ei~il~~l~HpnIv~l~g~~~~--~ 461 (701)
+|.+...||.|+||.||+|.+ .++.|++|.+........ +.+.+|+.++++++||||+++++++.+ .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999987 456799998876543321 357899999999999999999999844 4
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
.++||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||+++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNY---GAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCCc
Confidence 58999999999999988443 45888899999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCcc
Q 005343 542 LVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~ 621 (701)
.+.................|+..|+|||++.+..++.++|||||||++|+|++|+.||.............. . .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~---~---~ 228 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE---N---A 228 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc---c---C
Confidence 774321111111122345688999999999988899999999999999999999999976654443332111 1 1
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
....|...+..+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 229 SPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred CCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 112233445568999999999999999999999999874
No 85
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.3e-38 Score=340.79 Aligned_cols=243 Identities=23% Similarity=0.306 Sum_probs=194.4
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+. ++.||+|++...... ....+..|+.++..+ +||||+.+++++.+ ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 36999999999999984 456999998765322 234578899988876 89999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---- 150 (329)
T cd05618 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---- 150 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC----
Confidence 9998887433 45889999999999999999999999 9999999999999999999999999987532211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch-----------HHHHHHHcCccccccCc
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH-----------QVEQAIRNGTFSELLDP 620 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~-----------~~~~~i~~~~~~~~ld~ 620 (701)
.......||+.|+|||++.+..++.++|||||||++|+|+||++||.... .....+....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~------- 221 (329)
T cd05618 151 --DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ------- 221 (329)
T ss_pred --CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-------
Confidence 11234679999999999999999999999999999999999999995210 1111122111
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCC------hhhhhhHHHHHHH
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPD------LVSVVLPELIRLR 663 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt------~~~vl~~~~~~l~ 663 (701)
...|......+.+++.+||..+|.+||+ +.+++.|+|++-.
T Consensus 222 --~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 222 --IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred --CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence 1233344456899999999999999998 5799999988643
No 86
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7e-38 Score=342.64 Aligned_cols=256 Identities=23% Similarity=0.320 Sum_probs=198.0
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-------CCc
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE-------YGC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~ 463 (701)
+|++.+.||+|+||.||+|.+ .++.||||.+..... .....+.+|+.+++.++||||+++++++.. ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999997 467799998865422 234568899999999999999999998843 348
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+. ++|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 81 lv~e~~~-~~l~~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~ 153 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS---PQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARVE 153 (372)
T ss_pred EEeeccc-cCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceeec
Confidence 9999995 678777743 346899999999999999999999999 999999999999999999999999999865
Q ss_pred CCCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---Hc-C--cc--
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---RN-G--TF-- 614 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~~-~--~~-- 614 (701)
..... .......+|+.|+|||++.+. .++.++|||||||++|||++|++||...+.....- .. | ..
T Consensus 154 ~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~ 228 (372)
T cd07853 154 EPDES-----KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEA 228 (372)
T ss_pred ccCcc-----ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 43211 122445789999999988764 58999999999999999999999997654322110 00 0 00
Q ss_pred -------------ccccC-cc---CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 615 -------------SELLD-PT---VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 615 -------------~~~ld-~~---~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..... +. ...........+.+|+.+||+.+|.+||++.+++.|+|++-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 229 MRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 00000 00 00111122446889999999999999999999999999875
No 87
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=8.6e-38 Score=339.62 Aligned_cols=255 Identities=22% Similarity=0.257 Sum_probs=199.0
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
..++|.+.+.||+|+||.||++.+. +..||||++...... ....+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4678999999999999999999874 566999998764322 23567889999999999999999998732
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++||||+++ +|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg~ 165 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 165 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCcc
Confidence 24899999965 6666552 24788889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-----
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN----- 611 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~----- 611 (701)
++...... ......||..|+|||++.+..++.++|||||||++|+|++|+.||...+..... +..
T Consensus 166 ~~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 166 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred cccCCCcc-------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 98653221 123457899999999999989999999999999999999999999765432111 000
Q ss_pred ------------------Ccccccc---------CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 612 ------------------GTFSELL---------DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 612 ------------------~~~~~~l---------d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+..+. .+....++......+.+|+.+||..+|++||++.+++.|+|+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence 0000000 00001111122346889999999999999999999999999863
No 88
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=9e-38 Score=338.81 Aligned_cols=251 Identities=30% Similarity=0.447 Sum_probs=214.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCC---hHHHHHHHHHHHhCC-CCcEEEEeceecCCC--c
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQG---PRQFKQEVEILGSMR-HTNMVILLGACPEYG--C 463 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~-HpnIv~l~g~~~~~~--~ 463 (701)
..+.|.+.+.||+|.||.||+++... +.+|+|++.+..... ...+.+|+.||+.+. |||||.++++|.+.. +
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 45679999999999999999999854 559999998776443 357999999999998 999999999996544 8
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC----CCcEEEEeecc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ----NYVSKISDVGL 539 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~----~~~~KL~DFGl 539 (701)
+|||++.||.|.+.+... . +++.....++.|++.++.|||+.| |+||||||+|+|+.. ++.+|++|||+
T Consensus 113 lvmEL~~GGeLfd~i~~~---~-~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK---H-YSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEEecCCchHHHHHHHc---c-CCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 999999999999999776 2 899999999999999999999999 999999999999953 35899999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSEL 617 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ 617 (701)
+..+.+ .......+||+.|+|||++....|+..+||||+||++|.|++|.+||..... ....+..+.+ .+
T Consensus 186 a~~~~~-------~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~-~f 257 (382)
T KOG0032|consen 186 AKFIKP-------GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDF-DF 257 (382)
T ss_pred ceEccC-------CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCC-CC
Confidence 998754 2345788999999999999999999999999999999999999999987763 3344555654 12
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
....|+ .....+.+++..|+..+|..|+++.++|.|+|.+
T Consensus 258 ---~~~~w~-~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 258 ---TSEPWD-DISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred ---CCCCcc-ccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 222343 3356689999999999999999999999999954
No 89
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.1e-37 Score=326.83 Aligned_cols=256 Identities=23% Similarity=0.314 Sum_probs=199.3
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||.|+||.||+|+.. +..||+|++...... ....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4888999999999999999984 566999998654322 23568899999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. ++|.+++........+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~- 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV- 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCCc-
Confidence 96 688888765544467899999999999999999999999 9999999999999999999999999997653221
Q ss_pred cccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Ccc---------
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GTF--------- 614 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~~--------- 614 (701)
.......+++.|+|||++.+ ..++.++|||||||++|+|+||++||............ +..
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T cd07861 156 -----RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVT 230 (285)
T ss_pred -----ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcch
Confidence 11234467899999998765 45789999999999999999999999766543322210 000
Q ss_pred ---------ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 615 ---------SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 615 ---------~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...............+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 231 SLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence 0000000000011123467899999999999999999999999874
No 90
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.2e-37 Score=331.56 Aligned_cols=257 Identities=22% Similarity=0.339 Sum_probs=198.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
++|.+.+.||+|+||.||+|++. +..||+|.+...... ....+.+|+.+++.++||||+++++++. +..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57999999999999999999884 456999998755432 3346789999999999999999999984 345899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 158 (309)
T cd07872 86 LD-KDLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT- 158 (309)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc-
Confidence 96 48887775432 35788889999999999999999999 9999999999999999999999999997643221
Q ss_pred cccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HHHc-Cc----------
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ---AIRN-GT---------- 613 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~---~i~~-~~---------- 613 (701)
.......+|+.|+|||++.+ ..++.++|||||||++|+|+||++||......+. .... +.
T Consensus 159 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07872 159 -----KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGIS 233 (309)
T ss_pred -----cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhc
Confidence 11234568999999998754 5689999999999999999999999975542211 1110 00
Q ss_pred ----cccccCccCC-----CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 614 ----FSELLDPTVT-----GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 614 ----~~~~ld~~~~-----~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.....+... ......+..+.+++.+||..+|.+|||+.+++.|+|++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~ 291 (309)
T cd07872 234 SNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS 291 (309)
T ss_pred chhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence 0000000000 000123446789999999999999999999999999974
No 91
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.1e-38 Score=340.85 Aligned_cols=255 Identities=23% Similarity=0.287 Sum_probs=201.5
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|.. .+..||+|++..... .....+.+|+.+++.++||||+.+++.+.+ ..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 4699999999999999999998 456699999876432 234458899999999999999999998854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYE--DQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 9999999999885542 36899999999999999999999999 999999999999999999999999999876432
Q ss_pred CCcccccccccccccCCCccCccccc------CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCc
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQ------TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDP 620 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~------~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~ 620 (701)
.. .......||+.|+|||++. ...++.++|||||||++|+|++|+.||............-.....+.
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~- 229 (330)
T cd05601 156 KM-----VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK- 229 (330)
T ss_pred Cc-----eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC-
Confidence 21 1123457999999999876 45688999999999999999999999976543322111001111110
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.... ...+..+.+|+..||. +|.+||++.+++.|+|+.-
T Consensus 230 -~~~~-~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~ 268 (330)
T cd05601 230 -FPED-PKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSK 268 (330)
T ss_pred -CCCC-CCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence 0111 1234458899999998 9999999999999998763
No 92
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-37 Score=326.78 Aligned_cols=249 Identities=28% Similarity=0.476 Sum_probs=200.4
Q ss_pred cCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCc
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGC 463 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 463 (701)
++|.+.+.||+|+||.||+|...+ ..|++|.+...... ....|.+|+.++..++||||+++++++.+ ..|
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 358889999999999999998743 34999988755322 23458999999999999999999999854 358
Q ss_pred eEEeecCCCChhhHhcccCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC
Q 005343 464 LVYEYMENGSLEDRLFQKDN-------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY 530 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~ 530 (701)
++|||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999865422 145888999999999999999999999 99999999999999999
Q ss_pred cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHH
Q 005343 531 VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQ 607 (701)
Q Consensus 531 ~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~ 607 (701)
.+||+|||+++.+..... ........+++.|+|||++.+..++.++|||||||++|||++ |..||.... ....
T Consensus 162 ~~~L~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05048 162 TVKISDFGLSRDIYSADY----YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIE 237 (283)
T ss_pred cEEECCCcceeecccccc----ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 999999999986532211 111234467889999999998999999999999999999998 999986443 2333
Q ss_pred HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 608 AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 608 ~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.+..+.. ...|..++..+.+|+.+||+.+|.+||++.+|+.+
T Consensus 238 ~i~~~~~--------~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~ 279 (283)
T cd05048 238 MIRSRQL--------LPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR 279 (283)
T ss_pred HHHcCCc--------CCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 3343322 12234556679999999999999999999999854
No 93
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.6e-38 Score=342.11 Aligned_cols=251 Identities=24% Similarity=0.370 Sum_probs=197.7
Q ss_pred hhcCceeeeeeeecCceeEEEEEE-------CCceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL-------DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~-------~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-- 460 (701)
..++|++.+.||+|+||.||+|++ .+..||||+++.... .....+.+|+.+|..+ +||||++++|+|.+
T Consensus 33 ~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~ 112 (375)
T cd05104 33 PRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG 112 (375)
T ss_pred chHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC
Confidence 345799999999999999999974 233699999876542 2345688999999999 89999999999854
Q ss_pred CCceEEeecCCCChhhHhcccCC---------------------------------------------------------
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDN--------------------------------------------------------- 483 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~--------------------------------------------------------- 483 (701)
..++||||+++|+|.+++.....
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 45899999999999998854321
Q ss_pred ---------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 484 ---------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 484 ---------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 125788999999999999999999999 99999999999999999999999999986643211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch---HHHHHHHcCccccccCccCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH---QVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~ 624 (701)
........++..|+|||.+.+..++.++|||||||++|||++ |.+||.... .....+..+... .
T Consensus 270 ----~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~--------~ 337 (375)
T cd05104 270 ----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM--------L 337 (375)
T ss_pred ----ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC--------C
Confidence 011123345678999999999999999999999999999998 889986542 223333333211 1
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.|...+..+.+++.+||..+|.+||++.+|+..
T Consensus 338 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 338 SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 112223468999999999999999999999853
No 94
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.4e-37 Score=339.21 Aligned_cols=254 Identities=22% Similarity=0.276 Sum_probs=198.7
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
..++|.+.+.||+|+||.||+|.+. +..||||++..... .....+.+|+.+++.++||||+.+++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999974 56699999876432 234568899999999999999999988732
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~ 172 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 172 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH-----hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCCC
Confidence 2389999996 46776663 23788889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-C---
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN-G--- 612 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~-~--- 612 (701)
++...... ......||..|+|||++.+..++.++|||||||+||+|++|+.||...+..... +.. +
T Consensus 173 a~~~~~~~-------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 173 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred ccccCCCC-------cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98653221 123457899999999999999999999999999999999999999765432211 110 0
Q ss_pred -------------------ccc---------cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 613 -------------------TFS---------ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 613 -------------------~~~---------~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.+. ..+.+............+.+|+.+||..||.+|||+.+++.|+|+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 000 0000000011111234588999999999999999999999999986
No 95
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-37 Score=320.96 Aligned_cols=253 Identities=22% Similarity=0.358 Sum_probs=203.3
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-----ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-----GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
++|.+.+.||+|+||.||+|.. .+..|++|.+...... ....+.+|++++++++||||+++++++.+ ..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 5789999999999999999987 4567999988654321 23458899999999999999999999854 4489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++++|.+.+... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||+++.+.
T Consensus 82 v~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAY---GALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 99999999999988543 35788999999999999999999999 9999999999999999999999999997653
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.... .........|+..|+|||++.+..++.++||||||+++|+|++|++||............... .....
T Consensus 156 ~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-----~~~~~ 227 (263)
T cd06625 156 TICS---SGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQ-----PTNPQ 227 (263)
T ss_pred cccc---ccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhcc-----CCCCC
Confidence 2211 011113456889999999999988999999999999999999999999765443332221111 11112
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.|...+..+.+++.+||..+|.+||++.+++.|.|+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred CCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 333445568999999999999999999999999874
No 96
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-38 Score=312.41 Aligned_cols=253 Identities=24% Similarity=0.377 Sum_probs=209.9
Q ss_pred cCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCC----Ch----HHHHHHHHHHHhC-CCCcEEEEeceecCCC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQ----GP----RQFKQEVEILGSM-RHTNMVILLGACPEYG 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~----~~----~~~~~Ei~il~~l-~HpnIv~l~g~~~~~~ 462 (701)
..|...+.||+|..+.|.++.++.+ .+|+|++...... .. +.-.+|+.||+++ .||+|+.+.++|....
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 4466667899999999999988544 4888887543321 12 2357899999998 6999999999996544
Q ss_pred --ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 463 --CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 463 --~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
++|+|.|+.|.|.|+|. ..-.+++....+|+.|++.|+.|||.++ ||||||||+|||+++|..+||+|||+|
T Consensus 97 F~FlVFdl~prGELFDyLt---s~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLT---SKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred hhhhhhhhcccchHHHHhh---hheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecccee
Confidence 68999999999999994 3456889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCC------CCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcC
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG------MLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNG 612 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~ 612 (701)
+.++++. +....|||++|+|||.+... .|+..+|+|++|||+|.||.|.|||-...+ +-..|.+|
T Consensus 171 ~~l~~Ge-------kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeG 243 (411)
T KOG0599|consen 171 CQLEPGE-------KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEG 243 (411)
T ss_pred eccCCch-------hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhc
Confidence 9886653 46788999999999976543 488899999999999999999999976654 35677888
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 613 TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 613 ~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+++ +-.|. | .+.+....+||.+||+.||..|.|..++|.|+|+.-..
T Consensus 244 kyq-F~spe---W-adis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~ 290 (411)
T KOG0599|consen 244 KYQ-FRSPE---W-ADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIA 290 (411)
T ss_pred ccc-cCCcc---h-hhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence 864 33333 3 34455689999999999999999999999999996533
No 97
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.1e-38 Score=343.35 Aligned_cols=242 Identities=23% Similarity=0.309 Sum_probs=195.1
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+. +..||+|++..... .....+..|+.++..+ +||||+.+++.|.+ ..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999984 55699999976432 2234578899999998 79999999999854 44899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 g~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~----- 149 (329)
T cd05588 81 GDLMFHMQRQ---RKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP----- 149 (329)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccC-----
Confidence 9998887443 46899999999999999999999999 999999999999999999999999998743111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch-----------HHHHHHHcCccccccCc
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH-----------QVEQAIRNGTFSELLDP 620 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~-----------~~~~~i~~~~~~~~ld~ 620 (701)
.......+||+.|+|||++.+..++.++|||||||++|+|+||++||.... .....+..+.+
T Consensus 150 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------ 222 (329)
T cd05588 150 -GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------ 222 (329)
T ss_pred -CCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------
Confidence 112245679999999999999999999999999999999999999995311 11122222211
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCC------hhhhhhHHHHHH
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPD------LVSVVLPELIRL 662 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt------~~~vl~~~~~~l 662 (701)
..|...+..+.+++.+||..+|.+||+ +.+++.|+|+.-
T Consensus 223 ---~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 223 ---RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred ---CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence 122233456899999999999999997 789999999864
No 98
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.7e-38 Score=337.27 Aligned_cols=244 Identities=25% Similarity=0.307 Sum_probs=194.8
Q ss_pred eeeeecCceeEEEEEECC--ceEEEEEeCCCC---CCChHHHHHHHHHHHh-CCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLDH--TSVAIKVLGPDI---SQGPRQFKQEVEILGS-MRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~---~~~~~~~~~Ei~il~~-l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|++.+ ..||||++.... ......+..|..++.. ++||||+++++++.+ ..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 369999999999999854 569999987642 2334456778888876 499999999999854 45799999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 150 (316)
T cd05619 81 GDLMFHIQSC---HKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC----
Confidence 9999988542 45888999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......||+.|+|||++.+..++.++|||||||++|+|++|++||...... ...+..+. +. +|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~------~~---~~~~~ 219 (316)
T cd05619 151 --AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN------PC---YPRWL 219 (316)
T ss_pred --CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CC---CCccC
Confidence 1123457999999999999999999999999999999999999999765432 22222211 11 12223
Q ss_pred HHHHHHHHHHhhccCcCCCCChh-hhhhHHHHHHHh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLV-SVVLPELIRLRD 664 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~-~vl~~~~~~l~~ 664 (701)
...+.+++.+||..+|.+||++. +++.|+|++-.+
T Consensus 220 ~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~ 255 (316)
T cd05619 220 TREAKDILVKLFVREPERRLGVKGDIRQHPFFREID 255 (316)
T ss_pred CHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence 34588999999999999999997 888898876533
No 99
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=7.2e-38 Score=326.04 Aligned_cols=254 Identities=25% Similarity=0.360 Sum_probs=201.9
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecC-------
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPE------- 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~------- 460 (701)
.+++.|.+.+.||+|+||.||+|... ++.||+|++.... .....+.+|+.++..+ +||||++++++|..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677889999999999999999884 5569999986543 3456789999999998 79999999999842
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++||||+.+|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~-~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT-KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccCCC
Confidence 247999999999999988543 2346889999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCcc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTF 614 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~ 614 (701)
+..+.... .......|++.|+|||++. ...++.++|||||||++|+|++|++||..............
T Consensus 158 ~~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~- 230 (272)
T cd06637 158 SAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR- 230 (272)
T ss_pred ceeccccc------ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-
Confidence 98653221 1124567899999999875 34588899999999999999999999965443322222111
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...+... +...+..+.+|+.+||..+|.+||++.+++.|+|+
T Consensus 231 --~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 231 --NPAPRLK--SKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred --CCCCCCC--CCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 0011111 11233468999999999999999999999999884
No 100
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-39 Score=315.95 Aligned_cols=254 Identities=23% Similarity=0.358 Sum_probs=209.9
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVY 466 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~ 466 (701)
++.|++.+.||+|.|+.||++.+. ++.+|+|+++... ..+.+.+.+|+.|-..|+|||||.|...+.+. .+||+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 467888899999999999999884 4558888765433 23567799999999999999999999988544 37999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc---CCCcEEEEeecccccc
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD---QNYVSKISDVGLARLV 543 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~---~~~~~KL~DFGla~~~ 543 (701)
|+|.||+|..-+..+ ..+++...-.++.||+.||.|+|.++ |||||+||.|+||. .+--+||+|||+|..+
T Consensus 90 e~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred ecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 999999998777655 34677788889999999999999999 99999999999994 4567899999999887
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHcCccccccCcc
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLS--HQVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~--~~~~~~i~~~~~~~~ld~~ 621 (701)
..+ ......+||+.|||||++...+|+..+|||+.|||||-||.|++||.+. +.+-+.|..|.+. -.
T Consensus 164 ~~g-------~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd----~~ 232 (355)
T KOG0033|consen 164 NDG-------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD----YP 232 (355)
T ss_pred CCc-------cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC----CC
Confidence 522 2246789999999999999999999999999999999999999999763 3445556666542 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
-+.|+ ...++..+|+.+||..||.+|.|+.+.|.|+|.+-++
T Consensus 233 ~~~w~-~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 233 SPEWD-TVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRE 274 (355)
T ss_pred CcccC-cCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchH
Confidence 22343 3455689999999999999999999999999988665
No 101
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=7.8e-38 Score=342.15 Aligned_cols=252 Identities=24% Similarity=0.317 Sum_probs=199.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
..++|++.+.||+|+||.||++.+. +..||+|++.+.. ......+.+|+.+++.++||||+++++.+.+ ..|+
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4567999999999999999999985 4569999986432 1223458899999999999999999999854 4589
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++.. ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+|..+.
T Consensus 121 v~Ey~~gg~L~~~l~~----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSN----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 9999999999998843 24788889999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCCccCcccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCcccccc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTG----MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELL 618 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~l 618 (701)
... .......+||+.|+|||++... .++.++|||||||+||+|+||++||...+.... .+.....
T Consensus 194 ~~~-----~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~---- 264 (370)
T cd05621 194 ETG-----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN---- 264 (370)
T ss_pred cCC-----ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCc----
Confidence 221 1123456899999999988654 378999999999999999999999976654322 1111110
Q ss_pred CccCCCCCH--HHHHHHHHHHHHhhccCcCC--CCChhhhhhHHHHHH
Q 005343 619 DPTVTGWPV--EAALSIAKLALQCCELRKRD--RPDLVSVVLPELIRL 662 (701)
Q Consensus 619 d~~~~~~p~--~~~~~l~~li~~cl~~~P~~--RPt~~~vl~~~~~~l 662 (701)
...+|. ..+..+.+++..||..++.+ ||++.+++.|+|++-
T Consensus 265 ---~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~ 309 (370)
T cd05621 265 ---SLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKN 309 (370)
T ss_pred ---ccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence 011222 23445889999999855544 899999999999874
No 102
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=2.3e-38 Score=338.81 Aligned_cols=244 Identities=24% Similarity=0.295 Sum_probs=194.7
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+. +..||+|++.... ......+..|..++..+ +||||+++++++.+ ..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999985 4569999987642 22344567788888754 89999999999854 44899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~i~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 150 (316)
T cd05620 81 GDLMFHIQDK---GRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD---- 150 (316)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC----
Confidence 9999888543 35788999999999999999999999 9999999999999999999999999987432111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...... ...+..+. +. .|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~------~~---~~~~~ 219 (316)
T cd05620 151 --NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDT------PH---YPRWI 219 (316)
T ss_pred --CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC------CC---CCCCC
Confidence 1224567999999999999999999999999999999999999999765432 12222211 11 22223
Q ss_pred HHHHHHHHHHhhccCcCCCCChh-hhhhHHHHHHHh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLV-SVVLPELIRLRD 664 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~-~vl~~~~~~l~~ 664 (701)
...+.+++.+||..+|.+||++. +++.|+|++-.+
T Consensus 220 ~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~ 255 (316)
T cd05620 220 TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTIN 255 (316)
T ss_pred CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCC
Confidence 44689999999999999999984 787899986544
No 103
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-37 Score=327.29 Aligned_cols=254 Identities=23% Similarity=0.355 Sum_probs=207.7
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
..+|.+.+.||+|+||.||+|.. .+..|++|.+..........+.+|+.+++.++||||+++++.|.. ..|+||||
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 35799999999999999999987 456799999877665556778999999999999999999998843 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 99 ~~~~~L~~~~~~----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~- 170 (296)
T cd06654 99 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ- 170 (296)
T ss_pred cCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence 999999998843 34788999999999999999999999 9999999999999999999999999987653321
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.......|++.|+|||++.+..++.++|||||||++|+|++|++||............... ..+.. ..+..
T Consensus 171 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~-~~~~~ 241 (296)
T cd06654 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN---GTPEL-QNPEK 241 (296)
T ss_pred -----cccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC---CCCCC-CCccc
Confidence 1123457899999999999888999999999999999999999999765543222211110 00111 12233
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
....+.+++.+||..+|.+||++.+++.|+|+...
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred cCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 44568999999999999999999999999999864
No 104
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.1e-37 Score=320.22 Aligned_cols=256 Identities=24% Similarity=0.421 Sum_probs=203.1
Q ss_pred CceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCCCC------hHHHHHHHHHHHhCCCCcEEEEeceecCC--CceE
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQG------PRQFKQEVEILGSMRHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~------~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV 465 (701)
+|.+.+.||.|+||.||+|.. .+..+|+|.+....... ...+.+|+++++.++||||++++++|.+. .++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999987 55669999886543221 24588999999999999999999998544 4899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++++|.+++.+. .++++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++..+..
T Consensus 81 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRF---GPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 9999999999998543 35788999999999999999999999 99999999999999999999999999986532
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
...............|+..|+|||++.+..++.++|||||||++|+|++|++||................... ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~ 230 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLM----PRL 230 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCC----CCC
Confidence 2111111112234578999999999999899999999999999999999999997655443332221111111 112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 231 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 231 PDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred CCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 23344568999999999999999999999999884
No 105
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-37 Score=326.47 Aligned_cols=255 Identities=25% Similarity=0.315 Sum_probs=203.3
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|+..+.||+|+||.||+|.+. ++.||+|.+...... ....+.+|+++|+.++|+||+.+.+.+.+ ..|+|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3778899999999999999984 566999998654322 23457889999999999999999988743 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+.+.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 156 (285)
T cd05632 81 IMNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE 156 (285)
T ss_pred eccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCCC
Confidence 999999998875433 346899999999999999999999999 9999999999999999999999999997653221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~ 625 (701)
......|+..|+|||++.+..++.++|+|||||++|+|+||++||....... ..+... .... ...+
T Consensus 157 -------~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~-~~~~----~~~~ 224 (285)
T cd05632 157 -------SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR-VLET----EEVY 224 (285)
T ss_pred -------cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh-hhcc----cccc
Confidence 1234578999999999998999999999999999999999999997554321 111111 1100 0112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHHHhc
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRLRDL 665 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l~~~ 665 (701)
+...+..+.+|+..||..+|.+||+ +.+++.|.|++..++
T Consensus 225 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~ 269 (285)
T cd05632 225 SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNF 269 (285)
T ss_pred CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence 2233446899999999999999999 889999999986543
No 106
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.7e-37 Score=319.19 Aligned_cols=244 Identities=23% Similarity=0.400 Sum_probs=197.4
Q ss_pred cCceeeeeeeecCceeEEEEEECC-ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH-TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
++|.+.+.||+|+||.||++.+.. ..+|+|.+.... .....+.+|+.+|+.++||||++++++|.+ ..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 458889999999999999999854 469999876443 345678999999999999999999999854 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+.....
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05114 83 NGCLLNYLRQRQ--GKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-- 155 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCce--
Confidence 999999885433 35889999999999999999999999 99999999999999999999999999986532211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......++..|+|||++.+..++.++||||||+++|+|++ |++||...... ...+..+.. . ..|.
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~--~------~~~~ 224 (256)
T cd05114 156 ---TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFR--L------YRPK 224 (256)
T ss_pred ---eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCC--C------CCCC
Confidence 01123345678999999988889999999999999999999 89999765432 223333321 1 1122
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~ 253 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLR 253 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 23446899999999999999999999974
No 107
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.1e-37 Score=322.51 Aligned_cols=246 Identities=23% Similarity=0.354 Sum_probs=196.5
Q ss_pred hcCceeeeeeeecCceeEEEEEEC-----CceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD-----HTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~-----~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.++|.+.+.||+|+||.||+|.+. +..||+|.++...... ...|.+|+.++..++||||++++|++.. ..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 356899999999999999999863 3469999987654322 3468899999999999999999999844 4589
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++.... ..+++..++.++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 84 VTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 999999999999885432 46899999999999999999999999 9999999999999999999999999876532
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~ 621 (701)
... ........++..|+|||++.+..++.++|||||||++|||++ |.+||...... ...+..+..
T Consensus 159 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~------- 226 (266)
T cd05064 159 SEA-----IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR------- 226 (266)
T ss_pred ccc-----hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC-------
Confidence 111 111123345678999999999999999999999999999875 99999755432 223333321
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...|..++..+.+++.+||+.+|.+||++.+|+.
T Consensus 227 -~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 227 -LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred -CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 1123344556899999999999999999999863
No 108
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2.8e-38 Score=338.46 Aligned_cols=243 Identities=24% Similarity=0.294 Sum_probs=197.1
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+. +..||||++.... ......+..|+.++..+ +||||+++++++.+ ..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999984 4569999987642 22345577899999888 79999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 150 (318)
T cd05570 81 GDLMFHIQRS---GRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG---- 150 (318)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC----
Confidence 9999887543 35899999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|+||+.||...+... ..+..... .+|...
T Consensus 151 --~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (318)
T cd05570 151 --VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV---------RYPRWL 219 (318)
T ss_pred --CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC---------CCCCcC
Confidence 11234579999999999999999999999999999999999999997654322 22222211 122334
Q ss_pred HHHHHHHHHHhhccCcCCCCCh-----hhhhhHHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDL-----VSVVLPELIRLR 663 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~l~ 663 (701)
+..+.+++.+||..+|.+||++ .+++.|+|++-.
T Consensus 220 ~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~ 258 (318)
T cd05570 220 SKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI 258 (318)
T ss_pred CHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence 4568999999999999999999 999999988653
No 109
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.7e-37 Score=325.46 Aligned_cols=255 Identities=23% Similarity=0.359 Sum_probs=208.6
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
..+|.+.+.||.|+||.||+|.. .+..|++|.+..........+.+|+.+++.++|||++.+++.|.+ ..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 34699999999999999999987 566799999876655556678999999999999999999999844 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|..++.. ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..+....
T Consensus 98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~- 169 (296)
T cd06655 98 LAGGSLTDVVTE----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ- 169 (296)
T ss_pred cCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhccccc-
Confidence 999999998743 35899999999999999999999999 9999999999999999999999999987653321
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.......|+..|+|||.+.+..++.++|||||||++|+|++|++||...+............ .+. ...+..
T Consensus 170 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~---~~~-~~~~~~ 240 (296)
T cd06655 170 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG---TPE-LQNPEK 240 (296)
T ss_pred -----ccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC---Ccc-cCCccc
Confidence 11234578899999999998889999999999999999999999998765543322211100 001 111233
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.+..+.+++.+||..+|.+||++.+++.|+|++...
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 445688999999999999999999999999998643
No 110
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.8e-37 Score=324.55 Aligned_cols=251 Identities=25% Similarity=0.398 Sum_probs=198.0
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--C
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--Y 461 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~ 461 (701)
..++|++.+.||+|+||.||+|.+.+ ..||+|++..... .....+.+|+.+++.++||||+++++++.+ .
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 56789999999999999999998643 3599998865432 223458899999999999999999999854 4
Q ss_pred CceEEeecCCCChhhHhcccCC-------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEE
Q 005343 462 GCLVYEYMENGSLEDRLFQKDN-------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKI 534 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL 534 (701)
.++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 5899999999999998854321 234678889999999999999999998 999999999999999999999
Q ss_pred EeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHc
Q 005343 535 SDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRN 611 (701)
Q Consensus 535 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~ 611 (701)
+|||+++.+..... ........++..|+|||++..+.++.++|||||||++|||++ |.+||...... ...+..
T Consensus 161 ~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~ 236 (277)
T cd05062 161 GDFGMTRDIYETDY----YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME 236 (277)
T ss_pred CCCCCccccCCcce----eecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 99999976533211 111123356788999999998899999999999999999999 78898655432 222222
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
+.+. ..+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 237 ~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 237 GGLL--------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCcC--------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 2221 1222334568999999999999999999999743
No 111
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.5e-37 Score=323.06 Aligned_cols=251 Identities=22% Similarity=0.341 Sum_probs=198.7
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
.++|.+.+.||+|+||.||+|.. .+..||+|++..........+.+|+.++..++||||+++++.+.. ..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35689999999999999999997 456699999976654555678899999999999999999998843 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+++... .++++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 88 ~~~~~L~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06646 88 CGGGSLQDIYHVT---GPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI- 160 (267)
T ss_pred CCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc-
Confidence 9999999988432 35889999999999999999999999 9999999999999999999999999998663221
Q ss_pred cccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCccCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPTVT 623 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~~~ 623 (701)
.......|++.|+|||.+. ...++.++|||||||++|+|++|++||........... ...+ ..+...
T Consensus 161 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 232 (267)
T cd06646 161 -----AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNF---QPPKLK 232 (267)
T ss_pred -----cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCC---CCCCCc
Confidence 1123456889999999874 44578899999999999999999999854332221111 1111 111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.+...+..+.+++.+||..+|.+||++.+++.|.|
T Consensus 233 -~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 233 -DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred -cccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 11223456899999999999999999999998754
No 112
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.8e-37 Score=317.18 Aligned_cols=247 Identities=28% Similarity=0.401 Sum_probs=203.1
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey 468 (701)
+|.+.+.||+|+||.||+|.. .+..|++|.+..... .....+.+|+.+++.++||||+++++++.+. .++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 478889999999999999998 456799998865432 2345688999999999999999999998544 5899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++... ....+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~~L~~~l~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQ-RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999988653 2356899999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p 626 (701)
......|++.|+|||++.+..++.++|+|||||++|+|+||+.||........ .+..+.+ ...+
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08529 157 ------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF--------PPVS 222 (256)
T ss_pred ------hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--------CCCc
Confidence 12345688999999999999999999999999999999999999976653221 1222221 1122
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
...+..+.+++.+||+.+|++||++.+++.|+|
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 255 (256)
T cd08529 223 QMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPS 255 (256)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence 234556999999999999999999999998876
No 113
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.3e-38 Score=324.80 Aligned_cols=264 Identities=25% Similarity=0.295 Sum_probs=211.4
Q ss_pred hcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceec--CCCceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACP--EYGCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV 465 (701)
.+.|++++.||.|.-|+||+++++++ .+|+|++.+..... ..+.+.|-+||+.++||.+..||..|. +..|||
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 34578889999999999999999775 59999998765433 345778999999999999999999994 455999
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||||+||+|..++ +++....|++..+..++.+++.||+|||..| ||+|||||+||||-++|++.|+||.|+.....
T Consensus 156 meyCpGGdL~~Lr-qkQp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLR-QKQPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHH-hhCCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999998755 5566678999999999999999999999999 99999999999999999999999999854311
Q ss_pred CC-------------------------------C-c------------------ccccccccccccCCCccCcccccCCC
Q 005343 546 SA-------------------------------A-D------------------TITQYHMTTAAGTFCYIDPEYQQTGM 575 (701)
Q Consensus 546 ~~-------------------------------~-~------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~ 575 (701)
.. . . .....+....+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 00 0 0 00011224679999999999999999
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC----h
Q 005343 576 LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD----L 651 (701)
Q Consensus 576 ~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt----~ 651 (701)
.+.++|||+|||+|||||.|..||.+.+.-+...+- .. .+....+.| .....+.+||.+.|.+||++|.. +
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NI-v~---~~l~Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA 386 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNI-VG---QPLKFPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGA 386 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHH-hc---CCCcCCCCC-cchhHHHHHHHHHhccChhhhhccccch
Confidence 999999999999999999999999877643322220 00 112223333 44556899999999999999999 9
Q ss_pred hhhhhHHHHHHHhc
Q 005343 652 VSVVLPELIRLRDL 665 (701)
Q Consensus 652 ~~vl~~~~~~l~~~ 665 (701)
.+|=.|+||+=-++
T Consensus 387 ~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 387 AEIKRHPFFEGVNW 400 (459)
T ss_pred HHhhcCccccCCCh
Confidence 99999999875444
No 114
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.3e-37 Score=326.40 Aligned_cols=251 Identities=23% Similarity=0.365 Sum_probs=201.5
Q ss_pred ceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
|++.+.||.|+||.||+|.+.. ..+++|.+..........+.+|+++++.++|||+++++++|.. ..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 6778899999999999999854 4588888865543445678899999999999999999998844 44899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|..++... ..++++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~~l~~~~~~~--~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 87 GAVDAVMLEL--ERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 9998877542 246899999999999999999999999 9999999999999999999999999987653211
Q ss_pred ccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCccCCC
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPTVTG 624 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~~~~ 624 (701)
.......|++.|+|||++. ...++.++|||||||++|+|++|++||........... .+....+ .
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~------~ 229 (282)
T cd06643 158 --QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL------A 229 (282)
T ss_pred --cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC------C
Confidence 1123457899999999874 44578899999999999999999999976554333222 1111111 1
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
.|...+..+.+++.+||..+|.+||++.+++.|+|+++.
T Consensus 230 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 230 QPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 122334568999999999999999999999999998763
No 115
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.1e-37 Score=324.70 Aligned_cols=246 Identities=23% Similarity=0.331 Sum_probs=192.9
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||+|+||.||++... +..||+|.+..... .....+..|+++++.++||||+++++.+.+ ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999874 56799998865321 123346679999999999999999988854 45899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+.+.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~------- 149 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK------- 149 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc-------
Confidence 98875433 345889999999999999999999999 9999999999999999999999999997654321
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
......||..|+|||++.+..++.++|||||||++|+|++|++||..... ....+....+....... ....+..
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 225 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFE----HQNFTEE 225 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccc----cccCCHH
Confidence 12345789999999999998999999999999999999999999975321 11111111111111100 1123445
Q ss_pred HHHHHHHhhccCcCCCCCh----hhhhhHHHHHH
Q 005343 633 IAKLALQCCELRKRDRPDL----VSVVLPELIRL 662 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt~----~~vl~~~~~~l 662 (701)
+.+++.+||+.+|.+||++ .+++.|+|++.
T Consensus 226 ~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~ 259 (277)
T cd05607 226 SKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKT 259 (277)
T ss_pred HHHHHHHHhccCHhhCCCCccchhhhhcChhhcC
Confidence 8999999999999999999 66778999975
No 116
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.8e-37 Score=318.28 Aligned_cols=254 Identities=25% Similarity=0.354 Sum_probs=205.6
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
.++|.+.+.||.|+||.||+|... ++.+++|++..........+.+|+.+++.++||||++++|++.+ ..|++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 467999999999999999999984 56699999987655566789999999999999999999998743 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+.+++|.+++... ...+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~~l~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 155 (262)
T cd06613 82 CGGGSLQDIYQVT--RGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI- 155 (262)
T ss_pred CCCCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh-
Confidence 9999999987543 245889999999999999999999999 9999999999999999999999999997654321
Q ss_pred cccccccccccccCCCccCcccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG---MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
.......++..|+|||.+... .++.++|||||||++|+|+||++||.............. ..+ .+.....
T Consensus 156 -----~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~-~~~-~~~~~~~ 228 (262)
T cd06613 156 -----AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK-SNF-PPPKLKD 228 (262)
T ss_pred -----hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-ccC-CCccccc
Confidence 112345788999999998776 889999999999999999999999976543333222111 001 1111112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
+...+..+.+++.+||..+|.+||++.+++.|+|
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 2344567999999999999999999999998876
No 117
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.4e-37 Score=332.04 Aligned_cols=253 Identities=23% Similarity=0.335 Sum_probs=187.5
Q ss_pred eeeeeecCceeEEEEEEC----CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC----CCceEEeecC
Q 005343 399 SRKIGEGGYGPVYKAQLD----HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE----YGCLVYEYME 470 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~----~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~ 470 (701)
..+||+|+||.||+|... +..||+|.+... .....+.+|+.+|+.++||||+++++.+.. ..|+||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCC--CCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999863 356999988654 233557899999999999999999998732 3479999985
Q ss_pred CCChhhHhcccC------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE----cCCCcEEEEeeccc
Q 005343 471 NGSLEDRLFQKD------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL----DQNYVSKISDVGLA 540 (701)
Q Consensus 471 ~gsL~~~l~~~~------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl----~~~~~~KL~DFGla 540 (701)
++|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 68887764321 2235889999999999999999999999 9999999999999 45689999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchH------------HHH
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQ------------VEQ 607 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~------------~~~ 607 (701)
+.+..... .........||+.|+|||++.+ ..++.++|||||||++|+|++|++||..... ...
T Consensus 160 ~~~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07868 160 RLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDR 236 (317)
T ss_pred eccCCCCc---cccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHH
Confidence 87643211 1112345678999999998876 4589999999999999999999999964321 111
Q ss_pred HHHc-Cc-----------cc---ccc----CccCCCCC---------HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 608 AIRN-GT-----------FS---ELL----DPTVTGWP---------VEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 608 ~i~~-~~-----------~~---~~l----d~~~~~~p---------~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.+.. |. +. ... .......+ ......+.+|+.+||+.||.+|||+.+++.|+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07868 237 IFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPY 316 (317)
T ss_pred HHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 1110 00 00 000 00000000 001124779999999999999999999999998
Q ss_pred H
Q 005343 660 I 660 (701)
Q Consensus 660 ~ 660 (701)
+
T Consensus 317 f 317 (317)
T cd07868 317 F 317 (317)
T ss_pred C
Confidence 5
No 118
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-37 Score=336.76 Aligned_cols=254 Identities=22% Similarity=0.308 Sum_probs=197.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
..++|.+.+.||+|+||.||+|.+. +..||||++...... ....+.+|+.+|+.++||||++++++|..
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 4577999999999999999999874 456999998754322 23457889999999999999999987732
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..|++++++ +++|.+++. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVK----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred CcEEEEeecC-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcCCcc
Confidence 237899988 889988763 235899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---H-cCcc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---R-NGTF 614 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~-~~~~ 614 (701)
++..... ....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||...+...... . .+..
T Consensus 165 ~~~~~~~---------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07878 165 ARQADDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTP 235 (343)
T ss_pred ceecCCC---------cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 9865321 234578999999998876 568999999999999999999999997654322111 0 0000
Q ss_pred -ccccC-----------ccCCCCCH--------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 615 -SELLD-----------PTVTGWPV--------EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 615 -~~~ld-----------~~~~~~p~--------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...+. ..+...+. .....+.+|+.+||..+|.+||++.+++.|+|+.-
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 00000 00001110 11234789999999999999999999999999974
No 119
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=7.5e-38 Score=340.89 Aligned_cols=257 Identities=23% Similarity=0.286 Sum_probs=199.6
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|++.+.||+|+||.||++... +..||+|++.... ......+..|+.++..++||||+++++.+.+ ..|+||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46899999999999999999984 5569999986532 2234568889999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.+. ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 E~~~gg~L~~~l~~~---~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKK---DTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 999999999988543 35889999999999999999999999 999999999999999999999999998765321
Q ss_pred CCcc-----------------------------cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 005343 547 AADT-----------------------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARP 597 (701)
Q Consensus 547 ~~~~-----------------------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~ 597 (701)
.... .........+||+.|+|||++.+..++.++|||||||++|||+||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 1000 00001124589999999999999999999999999999999999999
Q ss_pred CCCCchHHHH--HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHH
Q 005343 598 AMGLSHQVEQ--AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRL 662 (701)
Q Consensus 598 pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l 662 (701)
||........ .+..... .+..+... .....+.+++.+|+. +|.+|++ +.+++.|+|+.-
T Consensus 235 Pf~~~~~~~~~~~i~~~~~-~~~~p~~~----~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 235 PFCSETPQETYRKVMNWKE-TLVFPPEV----PISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred CCCCCCHHHHHHHHHcCCC-ceecCCCC----CCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence 9976554322 1221110 01111111 123357888888774 9999984 789999999764
No 120
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-37 Score=351.74 Aligned_cols=261 Identities=25% Similarity=0.339 Sum_probs=206.8
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC-C-ceEEEEEeCCCCCCChHHHHHHHHHHHhCC-CCcEEEEecee-----cCC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD-H-TSVAIKVLGPDISQGPRQFKQEVEILGSMR-HTNMVILLGAC-----PEY-- 461 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~-~-~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~-----~~~-- 461 (701)
...++++.+.|.+|||+.||.|.+. + +.||+|.+-.......+.+.+||++|+.|. |||||.+++.+ .+.
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 3456888999999999999999984 3 679999887776677788999999999997 99999999943 112
Q ss_pred --CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 462 --GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 462 --~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..|.||||.||+|-|++..+.... |++.++++|+.|+++|+.+||... .||||||||-+||||+.+|..||||||.
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccc
Confidence 258999999999999997665444 999999999999999999999987 5899999999999999999999999999
Q ss_pred ccccCCCCCc--ccc-cccccccccCCCccCccc---ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCc
Q 005343 540 ARLVPPSAAD--TIT-QYHMTTAAGTFCYIDPEY---QQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGT 613 (701)
Q Consensus 540 a~~~~~~~~~--~~~-~~~~~~~~gt~~Y~aPE~---~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~ 613 (701)
|.-....... ... ...--....|+.|++||+ +.+...+.|+|||+|||+||-|+....||+..-.+ +|-+|+
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--aIlng~ 270 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--AILNGN 270 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce--eEEecc
Confidence 8644222110 000 001122356899999995 45677999999999999999999999999755322 334444
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
|.- +.. ..+...|.+||..||+.+|.+||++.+|+ +.+++|..
T Consensus 271 Y~~------P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~-~~~~~l~~ 313 (738)
T KOG1989|consen 271 YSF------PPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVL-EEIFELAN 313 (738)
T ss_pred ccC------CCC-ccHHHHHHHHHHHHhccCcccCCCHHHHH-HHHHHHhc
Confidence 321 111 35566799999999999999999999996 45666644
No 121
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=341.00 Aligned_cols=258 Identities=26% Similarity=0.347 Sum_probs=206.7
Q ss_pred hcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCChHHHHHHHHHHHhCC-C-----CcEEEEecee--cCCC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQGPRQFKQEVEILGSMR-H-----TNMVILLGAC--PEYG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~~~~~~~Ei~il~~l~-H-----pnIv~l~g~~--~~~~ 462 (701)
..+|.+.+.||+|.||.|.+|.+.++ .||||+++... .-..+...|+.||..|+ | -|+|.++++| .++.
T Consensus 185 ~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hl 263 (586)
T KOG0667|consen 185 AYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHL 263 (586)
T ss_pred EEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccce
Confidence 34799999999999999999998654 49999997653 44567788999999997 3 3899999987 5677
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC--CCcEEEEeeccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ--NYVSKISDVGLA 540 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~--~~~~KL~DFGla 540 (701)
|||+|.+ ..+|.++|..+ +..+|+...+..|+.||+.||.+||+.+ |||+||||+||||.. ...+||+|||.|
T Consensus 264 ciVfELL-~~NLYellK~n-~f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 264 CIVFELL-STNLYELLKNN-KFRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eeeehhh-hhhHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEecccc
Confidence 9999999 67999988554 4456999999999999999999999999 999999999999964 347899999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH----------
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---------- 610 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---------- 610 (701)
+..... ..+.+.+..|+|||++.+.+|+.++||||||||+.||+||.|.|.+.++.++.-.
T Consensus 339 c~~~q~---------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~ 409 (586)
T KOG0667|consen 339 CFESQR---------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPP 409 (586)
T ss_pred cccCCc---------ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCH
Confidence 875332 1256788999999999999999999999999999999999999988876544321
Q ss_pred ----cC----cccc---------------------------------ccCc-cCCCC----CHHHHHHHHHHHHHhhccC
Q 005343 611 ----NG----TFSE---------------------------------LLDP-TVTGW----PVEAALSIAKLALQCCELR 644 (701)
Q Consensus 611 ----~~----~~~~---------------------------------~ld~-~~~~~----p~~~~~~l~~li~~cl~~~ 644 (701)
.+ .|.. ..-| ....+ +......|.+++.+||.+|
T Consensus 410 ~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~d 489 (586)
T KOG0667|consen 410 KMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWD 489 (586)
T ss_pred HHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccC
Confidence 00 0000 0001 01111 1123356899999999999
Q ss_pred cCCCCChhhhhhHHHHHHHhc
Q 005343 645 KRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 645 P~~RPt~~~vl~~~~~~l~~~ 665 (701)
|..|+|..+.+.|+|+.....
T Consensus 490 P~~R~tp~qal~Hpfl~~~~~ 510 (586)
T KOG0667|consen 490 PAERITPAQALNHPFLTGTSL 510 (586)
T ss_pred chhcCCHHHHhcCcccccccc
Confidence 999999999999999995443
No 122
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=9.7e-38 Score=324.18 Aligned_cols=244 Identities=34% Similarity=0.560 Sum_probs=190.7
Q ss_pred eeeeeeeecCceeEEEEEEC------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 397 SISRKIGEGGYGPVYKAQLD------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~~------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.+.+.||.|.||.||+|.+. +..|+||+++..... ..+.|.+|++++++++||||++++|+|.+ ..++|||
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 35688999999999999997 556999999664322 25679999999999999999999999963 3489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.++|... ....+++..+..|+.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++.......
T Consensus 82 ~~~~g~L~~~L~~~-~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~ 157 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK-NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS 157 (259)
T ss_dssp --TTEBHHHHHHHT-CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred cccccccccccccc-cccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 99999999999765 2356899999999999999999999999 9999999999999999999999999998762211
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~ 624 (701)
. ........+...|+|||.+....++.++||||||+++|||+| |+.||..... ....+.++... .
T Consensus 158 ~----~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~--------~ 225 (259)
T PF07714_consen 158 K----YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRL--------P 225 (259)
T ss_dssp S----EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEET--------T
T ss_pred c----cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------e
Confidence 1 112234457788999999999999999999999999999999 7788865432 22333443321 1
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+..++..+.+++.+||..+|.+||++.+++.
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 22233445899999999999999999999974
No 123
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.3e-37 Score=362.79 Aligned_cols=261 Identities=22% Similarity=0.333 Sum_probs=204.5
Q ss_pred HHhhcCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC----C
Q 005343 390 EAATDYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE----Y 461 (701)
Q Consensus 390 ~~~~~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~ 461 (701)
....++|.+++.||+|+||.||+|.+.. ..||+|++...... ....|..|+.+|..|+|||||.++++|.+ .
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 3456789999999999999999999854 45899988754322 24568999999999999999999998732 3
Q ss_pred CceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCC----CCeeecCCCCCCeeEcC--------
Q 005343 462 GCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKP----EPLVHRDLKPANILLDQ-------- 528 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~----~~iiHrDLKp~NILl~~-------- 528 (701)
.||||||+++|+|.++|... .....+++..++.|+.||+.||.|||+.++ .+||||||||+||||+.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 48999999999999988653 223569999999999999999999998653 34999999999999964
Q ss_pred ---------CCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCC
Q 005343 529 ---------NYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARP 597 (701)
Q Consensus 529 ---------~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~ 597 (701)
.+.+||+|||++..+.... .....+||+.|+|||++.. ..++.++||||||||||+|+||++
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s-------~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES-------MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc-------cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 3458999999998653221 1234579999999998754 458999999999999999999999
Q ss_pred CCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 598 AMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 598 pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
||.........+..... ....... ..+..+.+||..||..+|.+||++.++|.|+|++..
T Consensus 242 PF~~~~~~~qli~~lk~--~p~lpi~----~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 242 PFHKANNFSQLISELKR--GPDLPIK----GKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred CCCcCCcHHHHHHHHhc--CCCCCcC----CCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 99765544333322110 0001111 123468999999999999999999999999998743
No 124
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.3e-38 Score=338.87 Aligned_cols=241 Identities=24% Similarity=0.293 Sum_probs=195.9
Q ss_pred eeeeecCceeEEEEEE-----CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 400 RKIGEGGYGPVYKAQL-----DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
+.||+|+||.||++.. .++.||+|++..... .....+.+|+++|++++||||++++++|.+ ..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999875 356799999875432 223457889999999999999999999854 3489999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.+. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~--- 152 (318)
T cd05582 82 GGDLFTRLSKE---VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--- 152 (318)
T ss_pred CCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC---
Confidence 99999988443 45899999999999999999999999 9999999999999999999999999987653221
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCCHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.......||+.|+|||++....++.++|||||||++|+|+||+.||........ .+..+.+ ..|..
T Consensus 153 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~---------~~p~~ 220 (318)
T cd05582 153 ---KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKL---------GMPQF 220 (318)
T ss_pred ---CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCC---------CCCCC
Confidence 112346799999999999988899999999999999999999999976543222 2222211 22333
Q ss_pred HHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRPD-----LVSVVLPELIR 661 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~ 661 (701)
.+..+.+++.+||+.+|.+||+ +.+++.|+|++
T Consensus 221 ~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~ 258 (318)
T cd05582 221 LSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFS 258 (318)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcC
Confidence 4456899999999999999999 67788888764
No 125
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.4e-37 Score=323.27 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=198.8
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYM 469 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~ 469 (701)
++|.+.+.||+|+||.||+|.+ .++.||+|++..........+.+|+.+++.++||||+++++.+. +..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 4688889999999999999988 45679999987665445566889999999999999999999874 3458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++... ..+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..+....
T Consensus 89 ~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 89 GGGSLQDIYHVT---GPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred CCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 999999988443 35889999999999999999999999 9999999999999999999999999987653221
Q ss_pred ccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--HcCccccccCccCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI--RNGTFSELLDPTVTG 624 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i--~~~~~~~~ld~~~~~ 624 (701)
.......|+..|+|||++. .+.++.++|||||||++|+|++|.+||.......... ....+.. +....
T Consensus 161 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~---~~~~~ 233 (267)
T cd06645 161 ----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQP---PKLKD 233 (267)
T ss_pred ----cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCC---Ccccc
Confidence 1123457899999999874 4568899999999999999999999985443222111 1111111 11110
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
....+..+.+++.+||..+|.+||++.+++.|+|
T Consensus 234 -~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 234 -KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred -cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 0112335889999999999999999999999876
No 126
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.3e-37 Score=324.39 Aligned_cols=255 Identities=22% Similarity=0.357 Sum_probs=202.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
..+.|++++.||.|+||.||+|.+. +..|++|++..........+.+|+.+++.++||||+++++.|.. ..|+|||
T Consensus 10 ~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (292)
T cd06644 10 PNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE 89 (292)
T ss_pred cchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence 3467999999999999999999984 45699999876654455678999999999999999999998743 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++++|..++.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 90 FCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred cCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 999999988775433 35899999999999999999999999 9999999999999999999999999987542211
Q ss_pred CcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
.......+++.|+|||++. ...++.++|||||||++|+|++|++||...+.......... ...+..
T Consensus 165 ------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~~~~ 235 (292)
T cd06644 165 ------QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAK---SEPPTL 235 (292)
T ss_pred ------cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhc---CCCccC
Confidence 1123456889999999874 44578899999999999999999999976553322222111 011111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
..+...+..+.+++.+||..+|.+||++.+++.|+|+.
T Consensus 236 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 273 (292)
T cd06644 236 -SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVS 273 (292)
T ss_pred -CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 11223344689999999999999999999999999865
No 127
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.9e-37 Score=326.55 Aligned_cols=252 Identities=26% Similarity=0.333 Sum_probs=201.0
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|+..+.||+|+||.||++.+. ++.||+|.+....... ...+.+|+.+++.++|+|++.+++.+.+ ..|+|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3778899999999999999985 4569999886543222 2457789999999999999999998854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++|+|||++.......
T Consensus 81 ~~~g~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05630 81 LMNGGDLKFHIYHMG-EAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 156 (285)
T ss_pred ecCCCcHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCCc
Confidence 999999999885432 245889999999999999999999999 9999999999999999999999999987653221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
......||..|+|||++.+..++.++|||||||++|+|++|++||...... ...... .+.......
T Consensus 157 -------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~-----~~~~~~~~~ 224 (285)
T cd05630 157 -------TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER-----LVKEVQEEY 224 (285)
T ss_pred -------cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHh-----hhhhhhhhc
Confidence 123457999999999999999999999999999999999999999754211 111110 000000112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRL 662 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l 662 (701)
+......+.+|+.+||+.+|.+||+ +.+++.|+|++-
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 225 SEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred CccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 2233456899999999999999999 899999999974
No 128
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.6e-37 Score=339.97 Aligned_cols=258 Identities=23% Similarity=0.285 Sum_probs=200.3
Q ss_pred HHHHhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecCC-
Q 005343 388 EIEAATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPEY- 461 (701)
Q Consensus 388 ei~~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~- 461 (701)
++....++|.+.+.||+|+||.||+|.+. +..||+|++.... ......+.+|+.+++.++||||+++++.+.+.
T Consensus 37 ~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 37 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred hcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 33445678999999999999999999985 4569999986422 12234578899999999999999999998543
Q ss_pred -CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 462 -GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 462 -~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
.++||||+++|+|.+++.. ..++...+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 4899999999999998843 24788888899999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCC----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCcc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG----MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTF 614 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~ 614 (701)
+.+.... .......+||+.|+|||++... .++.++|||||||+||+|++|++||...+.... .+.....
T Consensus 190 ~~~~~~~-----~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~ 264 (371)
T cd05622 190 MKMNKEG-----MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKN 264 (371)
T ss_pred eEcCcCC-----cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence 8764321 1122456799999999988653 378999999999999999999999987654321 1221110
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCC--CCChhhhhhHHHHHH
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRD--RPDLVSVVLPELIRL 662 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~--RPt~~~vl~~~~~~l 662 (701)
.+ .... +...+..+.+++..||...+.+ ||++.+++.|.|++-
T Consensus 265 -~~---~~~~-~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~ 309 (371)
T cd05622 265 -SL---TFPD-DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKN 309 (371)
T ss_pred -cc---cCCC-cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence 00 0111 1123456889999999844433 789999999998854
No 129
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.5e-37 Score=323.28 Aligned_cols=262 Identities=26% Similarity=0.366 Sum_probs=208.3
Q ss_pred cCHHHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecC
Q 005343 384 YTIEEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPE 460 (701)
Q Consensus 384 ~~~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 460 (701)
++..++..++++|.+.+.||+|+||.||++.. .++.+|+|++.... .....+.+|+.++.++ +|||+++++++|..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 44566667889999999999999999999998 45679999986542 2345688899999999 89999999998742
Q ss_pred -------CCceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 461 -------YGCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 461 -------~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCE
Confidence 358999999999999987532 23356899999999999999999999998 9999999999999999999
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCC-----CCchhhHHHHHHHHHHHHhCCCCCCCchHHHH
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM-----LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ 607 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-----~~~~sDvwSlGvil~elltG~~pf~~~~~~~~ 607 (701)
||+|||++..+.... .......|+..|+|||++.... ++.++|||||||++|+|++|++||........
T Consensus 168 kl~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~ 241 (291)
T cd06639 168 KLVDFGVSAQLTSTR------LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT 241 (291)
T ss_pred EEeecccchhccccc------ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH
Confidence 999999988653221 1123456899999999875443 68899999999999999999999976554333
Q ss_pred HHH--cCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 608 AIR--NGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 608 ~i~--~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
... .+....+. .+......+.+++.+||+.+|.+||++.+++.|+|++
T Consensus 242 ~~~~~~~~~~~~~------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~ 291 (291)
T cd06639 242 LFKIPRNPPPTLL------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK 291 (291)
T ss_pred HHHHhcCCCCCCC------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence 222 11111111 1222334689999999999999999999999999863
No 130
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-37 Score=325.71 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=206.9
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
..+|.+.+.||.|+||.||+|.. .+..||+|.+........+.+.+|+.+++.++||||+++++.|.. ..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 35799999999999999999987 467799999876655556678999999999999999999999844 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred cCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 999999998843 34788899999999999999999999 99999999999999999999999999876543211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
......+++.|+|||.+.+..++.++|+|||||++|+|++|++||...+........... ..+. ...|..
T Consensus 171 ------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~---~~~~-~~~~~~ 240 (297)
T cd06656 171 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN---GTPE-LQNPER 240 (297)
T ss_pred ------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccC---CCCC-CCCccc
Confidence 123456889999999999988999999999999999999999999765433221111100 0011 112333
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+..+.+++.+||..+|.+||++.+++.|+|++.
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 274 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKL 274 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCchhcc
Confidence 4456899999999999999999999999999874
No 131
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.4e-37 Score=320.72 Aligned_cols=257 Identities=25% Similarity=0.362 Sum_probs=201.3
Q ss_pred HHhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 390 EAATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 390 ~~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
+..++++.....||+|+||.||+|.+. +..|++|.+..........+.+|+.+++.++||||++++|++.. ..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 345667777789999999999999974 45699998876655556679999999999999999999999854 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVP 544 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~ 544 (701)
|||+++++|.+++.........++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||++..+.
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~ 160 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGTSKRLA 160 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchhheecc
Confidence 999999999998865322212277888899999999999999999 999999999999976 6799999999987653
Q ss_pred CCCCcccccccccccccCCCccCcccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGM--LGVKSDLYSLGVVLLQLITARPAMGLSHQVE-QAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~~~~~~~-~~i~~~~~~~~ld~~ 621 (701)
.... ......|+..|+|||++.... ++.++||||||+++|+|++|++||....... .....+.. ..
T Consensus 161 ~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~ 229 (268)
T cd06624 161 GINP------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMF-----KI 229 (268)
T ss_pred cCCC------ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhh-----cc
Confidence 2211 122345889999999986654 7899999999999999999999996433211 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
....|......+.+++.+||..+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 230 HPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred CCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 122344455668999999999999999999999999884
No 132
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=2.3e-37 Score=339.03 Aligned_cols=249 Identities=25% Similarity=0.401 Sum_probs=195.8
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-- 460 (701)
..++|.+.+.||+|+||.||+|++.. ..||+|++...... ....+.+|+.+++.+ +||||++++|+|.+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 44579999999999999999998522 35999999765432 234588999999999 89999999999854
Q ss_pred CCceEEeecCCCChhhHhcccC----------------------------------------------------------
Q 005343 461 YGCLVYEYMENGSLEDRLFQKD---------------------------------------------------------- 482 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------- 482 (701)
..++||||+++|+|.+++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 4589999999999999885421
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccc
Q 005343 483 ---------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQ 553 (701)
Q Consensus 483 ---------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~ 553 (701)
...++++..+.+|+.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..... .
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~----~ 268 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN----Y 268 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcc----e
Confidence 1135788899999999999999999999 99999999999999999999999999986533211 1
Q ss_pred ccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHHcCccccccCccCCCCCHHH
Q 005343 554 YHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV---EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 554 ~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~---~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......++..|+|||++....++.++|||||||++|+|++ |++||...... ...+..+ + .+. .|...
T Consensus 269 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~-~----~~~---~~~~~ 340 (374)
T cd05106 269 VVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRG-Y----QMS---RPDFA 340 (374)
T ss_pred eeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcc-c----Ccc---CCCCC
Confidence 11223345678999999998999999999999999999997 99999654321 1222221 1 111 11222
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
+..+.+++.+||+.+|.+||++.+++
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~ 366 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQIS 366 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 45689999999999999999999996
No 133
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.9e-37 Score=328.23 Aligned_cols=253 Identities=23% Similarity=0.339 Sum_probs=187.3
Q ss_pred eeeeeecCceeEEEEEECC----ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec----CCCceEEeecC
Q 005343 399 SRKIGEGGYGPVYKAQLDH----TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP----EYGCLVYEYME 470 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~----~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~----~~~~lV~Ey~~ 470 (701)
..+||+|+||.||+|...+ ..||+|.+.... ....+.+|+.+++.++||||++++++|. ...++||||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 3689999999999999743 469999886542 3346789999999999999999999873 23479999985
Q ss_pred CCChhhHhccc------CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE----cCCCcEEEEeeccc
Q 005343 471 NGSLEDRLFQK------DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL----DQNYVSKISDVGLA 540 (701)
Q Consensus 471 ~gsL~~~l~~~------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl----~~~~~~KL~DFGla 540 (701)
++|.+++... .....+++..+..++.||+.||.|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 5777776422 12235889999999999999999999999 9999999999999 56789999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchH------------HHH
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQ------------VEQ 607 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~------------~~~ 607 (701)
+.+..... .........||+.|+|||++.+ ..++.++|||||||++|+|+||++||..... ...
T Consensus 160 ~~~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~ 236 (317)
T cd07867 160 RLFNSPLK---PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDR 236 (317)
T ss_pred eccCCCcc---cccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHH
Confidence 87643221 1112245678999999998876 4589999999999999999999999964321 111
Q ss_pred HHHc-C--------------ccccccC----c-----cC----CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 608 AIRN-G--------------TFSELLD----P-----TV----TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 608 ~i~~-~--------------~~~~~ld----~-----~~----~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.+.. + .+..... . .. ..........+.+|+.+||..||.+|||+.+++.|+|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~ 316 (317)
T cd07867 237 IFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPY 316 (317)
T ss_pred HHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 1110 0 0000000 0 00 0000011234778999999999999999999999998
Q ss_pred H
Q 005343 660 I 660 (701)
Q Consensus 660 ~ 660 (701)
+
T Consensus 317 f 317 (317)
T cd07867 317 F 317 (317)
T ss_pred C
Confidence 5
No 134
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=8e-37 Score=316.29 Aligned_cols=244 Identities=21% Similarity=0.363 Sum_probs=197.0
Q ss_pred cCceeeeeeeecCceeEEEEEECCc-eEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT-SVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~-~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
++|.+.+.||+|+||.||+|.+.+. .+|+|.+.... .....+.+|+.++..++||||++++++|.+ ..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 3588999999999999999988654 59999887543 345679999999999999999999999854 3489999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||+++.+.....
T Consensus 83 ~~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-- 155 (256)
T cd05113 83 NGCLLNYLREHG--KRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-- 155 (256)
T ss_pred CCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCce--
Confidence 999999885433 26899999999999999999999999 99999999999999999999999999986633211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......++..|++||++.+..++.++|||||||++|+|+| |+.||..... ....+..+... ..+.
T Consensus 156 ---~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 224 (256)
T cd05113 156 ---TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRL--------YRPH 224 (256)
T ss_pred ---eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCC--------CCCC
Confidence 11123346678999999998889999999999999999999 9999875443 22222222211 1112
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~ 253 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLS 253 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 23456899999999999999999999974
No 135
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.6e-37 Score=314.94 Aligned_cols=248 Identities=24% Similarity=0.387 Sum_probs=202.6
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-C--CceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE-Y--GCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~--~~lV~E 467 (701)
.|++.+.||+|+||.||++... +..|++|.+..... .....+.+|++++++++|||++++++.+.. . .++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4889999999999999999884 45699999865432 234568899999999999999999988743 2 379999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++++|.+.+... ....+++.++..++.+++.||.|||+.+ |+||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~~l~~~l~~~-~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQ-KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999988643 2346899999999999999999999999 9999999999999999999999999998663221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~ 625 (701)
. ......|++.|+|||++.+..++.++|||||||++|+|++|+.||...+... ..+..+.+. ..
T Consensus 157 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~--------~~ 222 (257)
T cd08223 157 D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP--------PM 222 (257)
T ss_pred C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC--------CC
Confidence 1 1234568899999999999999999999999999999999999997654322 122233221 12
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+...+..+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 223 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 223 PKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred ccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 23445569999999999999999999999999874
No 136
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-37 Score=334.21 Aligned_cols=241 Identities=25% Similarity=0.293 Sum_probs=191.2
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHH-HHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVE-ILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+ .++.||+|++..... .....+..|.. +++.++||||+++++.+.+ ..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3699999999999998 456799999865421 12234555555 4678999999999988744 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (323)
T cd05575 81 GELFFHLQRE---RSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS---- 150 (323)
T ss_pred CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC----
Confidence 9999888543 45888999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||...+.. ...+..+.. ..+...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (323)
T cd05575 151 --KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL---------RLKPNI 219 (323)
T ss_pred --CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC---------CCCCCC
Confidence 1224557999999999999999999999999999999999999999765432 122222221 111223
Q ss_pred HHHHHHHHHHhhccCcCCCCCh----hhhhhHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDL----VSVVLPELIR 661 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~----~~vl~~~~~~ 661 (701)
+..+.+++.+||+.+|.+||+. .+++.|+|+.
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~ 255 (323)
T cd05575 220 SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFS 255 (323)
T ss_pred CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcC
Confidence 4568999999999999999987 5889998864
No 137
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=1.1e-37 Score=334.49 Aligned_cols=247 Identities=23% Similarity=0.288 Sum_probs=197.2
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~ 466 (701)
+|...+.||+|+||.||+|... +..||+|++.... ......+..|+.++..+. ||+|+.+++.+.+ ..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4788899999999999999984 5569999987542 123345788999998886 4667778877743 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQV---GKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 999999999988543 35899999999999999999999999 999999999999999999999999998754221
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
. .......||+.|+|||++.+..++.++|||||||++|+|+||++||...... ...+..+.. .
T Consensus 155 ~------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~---------~ 219 (323)
T cd05615 155 G------VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV---------S 219 (323)
T ss_pred C------ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC---------C
Confidence 1 1123457999999999999999999999999999999999999999765432 222222221 2
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCCh-----hhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDL-----VSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~l 662 (701)
+|...+..+.+++.+||+.+|.+|++. .++..|+|++-
T Consensus 220 ~p~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~ 262 (323)
T cd05615 220 YPKSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRR 262 (323)
T ss_pred CCccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCC
Confidence 233344568999999999999999984 67888877764
No 138
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.2e-38 Score=339.31 Aligned_cols=242 Identities=24% Similarity=0.308 Sum_probs=193.9
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|... ++.||+|++...... ....+.+|+.++.++ +||||+.+++.+.+ ..|+||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999984 456999999765322 234578899999888 69999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|..++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---- 150 (327)
T cd05617 81 GDLMFHMQRQ---RKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG---- 150 (327)
T ss_pred CcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC----
Confidence 9999887433 35899999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch---------HHHHHHHcCccccccCccC
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH---------QVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~---------~~~~~i~~~~~~~~ld~~~ 622 (701)
......+||+.|+|||++.+..++.++|||||||+||+|+||++||.... ...+.+....
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------- 219 (327)
T cd05617 151 --DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------- 219 (327)
T ss_pred --CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC---------
Confidence 11245679999999999999999999999999999999999999995321 1122222111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCC------hhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPD------LVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt------~~~vl~~~~~~l 662 (701)
...|...+..+.+++.+||..+|.+||+ +.+++.|+|++-
T Consensus 220 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 220 IRIPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence 1123334456899999999999999998 469999988764
No 139
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=7.3e-37 Score=321.02 Aligned_cols=248 Identities=25% Similarity=0.400 Sum_probs=196.8
Q ss_pred cCceeeeeeeecCceeEEEEEE------CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL------DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~------~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
+.|++.+.||+|+||.||+|.+ .+..|++|.+...... ....+.+|+.+++.++||||+++++++.. ..|+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4688899999999999999985 2346999988754322 23568899999999999999999998743 4589
Q ss_pred EEeecCCCChhhHhcccCC--------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC
Q 005343 465 VYEYMENGSLEDRLFQKDN--------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY 530 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~ 530 (701)
||||+++|+|.+++..... ...+++.....++.|++.||.|||+.+ |+||||||+|||++.++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 9999999999998853321 235788899999999999999999999 99999999999999999
Q ss_pred cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHH
Q 005343 531 VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQ 607 (701)
Q Consensus 531 ~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~ 607 (701)
.+||+|||+++.+...... .......++..|+|||++.+..++.++|||||||++|||++ |.+||..... ...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~ 237 (283)
T cd05090 162 HVKISDLGLSREIYSADYY----RVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE 237 (283)
T ss_pred cEEeccccccccccCCcce----ecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence 9999999999866432111 11234456778999999988889999999999999999999 9999865432 233
Q ss_pred HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 608 AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 608 ~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+..+... ..+...+..+.+++.+||+.+|.+||++.+|+.
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 278 (283)
T cd05090 238 MVRKRQLL--------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHT 278 (283)
T ss_pred HHHcCCcC--------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 33332211 122334456899999999999999999999863
No 140
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=3.7e-37 Score=326.51 Aligned_cols=257 Identities=24% Similarity=0.339 Sum_probs=198.3
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|.+.+.||.|+||.||+|.+. +..||+|.+...... ....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 56999999999999999999884 566999998755422 34467889999999999999999999844 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. ++|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 86 ~~-~~l~~~l~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~- 158 (301)
T cd07873 86 LD-KDLKQYLDDC--GNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT- 158 (301)
T ss_pred cc-cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-
Confidence 96 6888877543 235788999999999999999999999 9999999999999999999999999997643211
Q ss_pred cccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---H------cCcccccc
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---R------NGTFSELL 618 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~------~~~~~~~l 618 (701)
.......+++.|+|||++.+ ..++.++|||||||++|+|+||++||...+..+... . ...+..++
T Consensus 159 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 -----KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred -----CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhh
Confidence 11234467899999998765 458899999999999999999999997654321110 0 00000000
Q ss_pred ---------CccC-----CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 619 ---------DPTV-----TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 619 ---------d~~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+.. ..+....+..+.+|+.+||..+|.+||++.+++.|+|++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC 291 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 0000 0011122345789999999999999999999999999963
No 141
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.3e-37 Score=322.13 Aligned_cols=260 Identities=25% Similarity=0.357 Sum_probs=204.7
Q ss_pred HHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceec----
Q 005343 387 EEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACP---- 459 (701)
Q Consensus 387 ~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~---- 459 (701)
+.+..+.++|.+.+.||+|+||.||+|.. .++.+++|++.... .....+.+|+.++..+ +||||++++++|.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 44556788999999999999999999988 45669999876532 2345688999999999 7999999999872
Q ss_pred ---CCCceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEE
Q 005343 460 ---EYGCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKIS 535 (701)
Q Consensus 460 ---~~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~ 535 (701)
+..++||||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~kl~ 166 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEGGVKLV 166 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCCCEEEc
Confidence 2348999999999999887532 23356888999999999999999999998 9999999999999999999999
Q ss_pred eeccccccCCCCCcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH
Q 005343 536 DVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR 610 (701)
Q Consensus 536 DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~ 610 (701)
|||+++.+.... .......|++.|+|||++. ...++.++|||||||++|+|++|++||...........
T Consensus 167 dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 167 DFGVSAQLTSTR------LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred cCCceeecccCC------CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 999998763321 1123457899999999875 34578999999999999999999999976654433322
Q ss_pred cCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 611 NGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 611 ~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..... .+.. ..|...+..+.+++.+||+.+|.+||++.+++.|.|+
T Consensus 241 ~~~~~---~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~ 286 (286)
T cd06638 241 IPRNP---PPTL-HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI 286 (286)
T ss_pred ccccC---CCcc-cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence 11110 0111 1122223458999999999999999999999999874
No 142
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.8e-37 Score=322.47 Aligned_cols=253 Identities=25% Similarity=0.383 Sum_probs=204.1
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
.++|.+.+.||.|+||.||+|.+. +..|++|++..........+.+|+++++.++||||+++++.+.+ ..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 467899999999999999999984 56699999876544455678999999999999999999999854 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~L~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (280)
T cd06611 84 CDGGALDSIMLELE--RGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL- 157 (280)
T ss_pred cCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc-
Confidence 99999999885433 35899999999999999999999999 9999999999999999999999999987653211
Q ss_pred cccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCcc
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPT 621 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~ 621 (701)
.......|++.|++||.+. ...++.++|||||||++|+|++|++||........... .+.. +.
T Consensus 158 -----~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-----~~ 227 (280)
T cd06611 158 -----QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEP-----PT 227 (280)
T ss_pred -----cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCC-----CC
Confidence 1123456899999999864 34578899999999999999999999976554332222 1111 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+ ..+...+..+.+++.+||..+|.+||++.+++.|+|+.-
T Consensus 228 ~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 228 L-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred c-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 1 112223446899999999999999999999999999864
No 143
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=9e-37 Score=325.04 Aligned_cols=254 Identities=25% Similarity=0.317 Sum_probs=199.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|.+.+.||+|+||.||++.+. +..+++|.+...... ....+.+|++++++++||||+++++.|.+ ..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46999999999999999999985 445888988654322 23458899999999999999999999844 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++|+|.+++... ..+++..+..++.|++.||.|||+ .+ ++||||||+|||++.++.+||+|||++..+....
T Consensus 81 ~~~~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (308)
T cd06615 81 MDGGSLDQVLKKA---GRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 154 (308)
T ss_pred cCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCcccccccc
Confidence 9999999998543 458899999999999999999997 46 9999999999999999999999999987653221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCc-----
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDP----- 620 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~----- 620 (701)
.....|+..|+|||.+.+..++.++|||||||++|+|+||++||....... ..+... ......+
T Consensus 155 --------~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 225 (308)
T cd06615 155 --------ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRP-VSEGEAKESHRP 225 (308)
T ss_pred --------cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCc-cccccccCCccc
Confidence 234578999999999988889999999999999999999999986443211 111100 0000000
Q ss_pred ------------------------cCCCCC-HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 621 ------------------------TVTGWP-VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 621 ------------------------~~~~~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.....| ...+..+.+++.+||..+|.+||++.+++.|+|+.-
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR 292 (308)
T ss_pred ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence 000000 013446899999999999999999999999999974
No 144
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=9.3e-37 Score=319.88 Aligned_cols=245 Identities=26% Similarity=0.358 Sum_probs=196.7
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
+|.+.+.||+|+||.||+|.+ .+..||+|++...... ....+.+|++++.+++||||+++++.|.. ..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 578889999999999999987 4556999998655322 23468899999999999999999999844 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|..+. .+++.....++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||++..+...
T Consensus 82 ~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~--- 148 (279)
T cd06619 82 DGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS--- 148 (279)
T ss_pred CCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc---
Confidence 999996542 4678888899999999999999999 999999999999999999999999999765322
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH---------HHHHHHcCccccccCc
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ---------VEQAIRNGTFSELLDP 620 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~---------~~~~i~~~~~~~~ld~ 620 (701)
......||..|+|||++.+..++.++|||||||++|+|++|+.||..... ....+..... +
T Consensus 149 -----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~ 218 (279)
T cd06619 149 -----IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP-----P 218 (279)
T ss_pred -----cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC-----C
Confidence 12345789999999999998999999999999999999999999854221 1111111110 1
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
... ....+..+.+++.+||+.+|..||++.+++.|+|++..+
T Consensus 219 ~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 219 VLP--VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN 260 (279)
T ss_pred CCC--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence 110 012234589999999999999999999999999987543
No 145
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=5.3e-37 Score=320.86 Aligned_cols=248 Identities=27% Similarity=0.442 Sum_probs=198.5
Q ss_pred cCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCc
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGC 463 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 463 (701)
+.|.+.+.||+|+||.||+|.+.+ ..||+|++...... ....+.+|+++|+.++||||+++++++.. ..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457888999999999999998632 46999998765443 34679999999999999999999999854 458
Q ss_pred eEEeecCCCChhhHhcccC-----------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 464 LVYEYMENGSLEDRLFQKD-----------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
+||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999986532 2345789999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHH
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAI 609 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i 609 (701)
||+|||+++.+..... ........+++.|+|||++.+..++.++|||||||++|+|++ |+.||..... ....+
T Consensus 162 kl~d~g~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05049 162 KIGDFGMSRDVYTTDY----YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI 237 (280)
T ss_pred EECCcccceecccCcc----eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9999999976532211 011123456788999999999999999999999999999998 9999864432 22233
Q ss_pred HcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 610 RNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 610 ~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+.... .+...+..+.+++.+||..+|.+||++.+++.
T Consensus 238 ~~~~~~~--------~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 276 (280)
T cd05049 238 TQGRLLQ--------RPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE 276 (280)
T ss_pred HcCCcCC--------CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 3333211 12233456899999999999999999999973
No 146
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.4e-37 Score=320.74 Aligned_cols=251 Identities=30% Similarity=0.451 Sum_probs=199.8
Q ss_pred ceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCChH--HHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQGPR--QFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~~~--~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
|++.+.||+|+||.||++...++ .||+|++......... ...+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 78899999999999999999554 5999999876533222 24569999999999999999999844 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++++|.+++. ....+++..+..++.||+.||.+||+.+ |+|+||||+|||++.++.++|+|||++..+...
T Consensus 81 ~~~~L~~~l~---~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~--- 151 (260)
T PF00069_consen 81 PGGSLQDYLQ---KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLSEN--- 151 (260)
T ss_dssp TTEBHHHHHH---HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEESTST---
T ss_pred cccccccccc---cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc---
Confidence 9999999996 3346899999999999999999999999 999999999999999999999999998764111
Q ss_pred ccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCccCCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~~p 626 (701)
........+|..|+|||++. ...++.++||||||+++|+|++|..||.... .....+............. . .
T Consensus 152 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 226 (260)
T PF00069_consen 152 ---NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQ-Q-S 226 (260)
T ss_dssp ---TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTT-S-H
T ss_pred ---ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccccc-c-c
Confidence 11235667899999999988 8889999999999999999999999998762 2222222111101100000 0 0
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
......+.+++.+||+.+|++||++.+++.|+|+
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 0112569999999999999999999999999985
No 147
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=9.3e-37 Score=314.25 Aligned_cols=250 Identities=26% Similarity=0.378 Sum_probs=204.8
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
++|.+.+.||.|+||.||+|... +..|++|.+..... ...+.+|+++++.++||||+++++.+.+ ..|++|||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57889999999999999999985 46799999876532 6789999999999999999999999854 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
.+++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++..+.....
T Consensus 81 ~~~~L~~~l~~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (256)
T cd06612 81 GAGSVSDIMKIT--NKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA- 154 (256)
T ss_pred CCCcHHHHHHhC--ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc-
Confidence 999999988543 246899999999999999999999999 99999999999999999999999999987643211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......|+..|+|||++.+..++.++|||||||++|+|+||++||............... ..+. ...+...
T Consensus 155 -----~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~-~~~~~~~ 225 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNK---PPPT-LSDPEKW 225 (256)
T ss_pred -----ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccC---CCCC-CCchhhc
Confidence 123445888999999999889999999999999999999999999765543333221111 0011 1112334
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 226 ~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 226 SPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred CHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 4568999999999999999999999999874
No 148
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=8.3e-37 Score=318.85 Aligned_cols=249 Identities=25% Similarity=0.393 Sum_probs=204.3
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC-CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI-SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|.+.+.||.|+||.||+|.+ .++.|++|++.... ......+.+|+.+++.++||||+++++++.+ ..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 3688889999999999999998 45679999987654 2334568899999999999999999998854 34799999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++... ++++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||+++.+....
T Consensus 81 ~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~- 152 (274)
T cd06609 81 CGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM- 152 (274)
T ss_pred eCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc-
Confidence 9999999988432 6899999999999999999999999 9999999999999999999999999998764321
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~~~~~~~~ld~~~~~~p 626 (701)
.......|++.|+|||++.+..++.++|||||||++|+|+||++||...+..... +..+. .+.....
T Consensus 153 -----~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~- 221 (274)
T cd06609 153 -----SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN-----PPSLEGN- 221 (274)
T ss_pred -----cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC-----CCCCccc-
Confidence 1224457889999999999888999999999999999999999999765432221 12221 1111111
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 222 -~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~ 256 (274)
T cd06609 222 -KFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKK 256 (274)
T ss_pred -ccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcC
Confidence 13446899999999999999999999999999964
No 149
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.2e-36 Score=316.53 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=200.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-----ChHHHHHHHHHHHhCCCCcEEEEeceecC----CC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-----GPRQFKQEVEILGSMRHTNMVILLGACPE----YG 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 462 (701)
.+|...+.||+|+||.||+|... ++.|++|.+...... ....+.+|+.+++.++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46889999999999999999974 567999988654321 12458889999999999999999998743 23
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
+++|||+++++|.+++... ..+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY---GALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 7899999999999988543 34788999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
+..... .........++..|+|||++.+..++.++|||||||++|+|++|++||.............. .+..
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-----~~~~ 227 (266)
T cd06651 156 LQTICM---SGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-----QPTN 227 (266)
T ss_pred cccccc---cCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-----CCCC
Confidence 532110 01112335688999999999988899999999999999999999999976544333322111 0111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
...|......+..++ +||..+|.+||++.+|+.|+|++
T Consensus 228 ~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 228 PQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 233334445577777 78889999999999999999975
No 150
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.2e-37 Score=331.27 Aligned_cols=254 Identities=26% Similarity=0.295 Sum_probs=195.8
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||++... ++.||+|++.+.. ......+.+|+.++..++||||+.++++|.+ ..|+||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47999999999999999999984 5669999986522 1233458899999999999999999998854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.+. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKF--EDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 999999999988543 235888999999999999999999999 999999999999999999999999998765332
Q ss_pred CCcccccccccccccCCCccCcccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQT-----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLD 619 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld 619 (701)
.. ......+||+.|+|||++.. +.++.++|||||||++|+|++|+.||......+. .+.......-+.
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~ 230 (331)
T cd05597 156 GT-----VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFP 230 (331)
T ss_pred CC-----ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCC
Confidence 11 11123469999999998763 5578899999999999999999999976543322 111111000011
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcC--CCCChhhhhhHHHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKR--DRPDLVSVVLPELIR 661 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~--~RPt~~~vl~~~~~~ 661 (701)
+... ..+..+.+++.+|+...++ .||++.+++.|+|+.
T Consensus 231 ~~~~----~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~ 270 (331)
T cd05597 231 PDVT----DVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFE 270 (331)
T ss_pred CccC----CCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCC
Confidence 1111 1344578888887765443 488999999999975
No 151
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.2e-36 Score=315.00 Aligned_cols=245 Identities=24% Similarity=0.435 Sum_probs=197.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
.++|++.++||+|+||.||+|... ++.|++|.+.... ...+.+.+|+.+++.++||||+++++.+.+ ..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 457999999999999999999874 4569999876543 345679999999999999999999988744 447999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..+.....
T Consensus 84 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05072 84 AKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY- 158 (261)
T ss_pred CCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce-
Confidence 9999999886532 345888999999999999999999999 99999999999999999999999999987643211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p 626 (701)
.......++..|+|||++..+.++.++|||||||++|+|+| |+.||..... ....+..+.. .+...
T Consensus 159 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~----~~~~~--- 227 (261)
T cd05072 159 ----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR----MPRME--- 227 (261)
T ss_pred ----eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----CCCCC---
Confidence 11123446778999999988889999999999999999998 9999965432 2223332211 11112
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
..+..+.+++.+||..+|++||++.+++
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 255 (261)
T cd05072 228 -NCPDELYDIMKTCWKEKAEERPTFDYLQ 255 (261)
T ss_pred -CCCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 2334589999999999999999999886
No 152
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.3e-37 Score=322.32 Aligned_cols=256 Identities=23% Similarity=0.353 Sum_probs=203.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|++++.||+|+||.||++.+. +..||+|.+...... ....+.+|+.++++++||||+++++.+.. ..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36888999999999999999985 667999988654322 23568899999999999999999998744 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++++|..++........+++..+..++.|++.||.|||+ .+ |+||||||+||+++.++.+||+|||++..+...
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 9999998887554334468999999999999999999996 47 999999999999999999999999998765321
Q ss_pred CcccccccccccccCCCccCcccccCC------CCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTG------MLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLD 619 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~------~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld 619 (701)
......|+..|+|||++.+. .++.++|||||||++|+|+||+.||....... ..+. .+.+
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~-----~~~~ 224 (286)
T cd06622 157 -------LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLS-----AIVD 224 (286)
T ss_pred -------ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHH-----HHhh
Confidence 12344688899999987544 35889999999999999999999996443211 1111 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
......+......+.+++.+||..+|.+||++.+++.|+|+.-.+.
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~ 270 (286)
T cd06622 225 GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270 (286)
T ss_pred cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence 1112234445667899999999999999999999999999876543
No 153
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.5e-37 Score=340.85 Aligned_cols=254 Identities=20% Similarity=0.278 Sum_probs=196.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECC----ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH----TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~----~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
..+|.+.+.||+|+||.||++...+ ..|++|.+... ..+.+|+.+|+.++||||+++++++.. ..|+||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 4579999999999999999998633 45899987543 345789999999999999999998854 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+. ++|.+++. ....+++..+..|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.+...
T Consensus 166 e~~~-~~l~~~l~---~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~ 238 (392)
T PHA03207 166 PKYK-CDLFTYVD---RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDAH 238 (392)
T ss_pred hhcC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence 9994 68888873 3356899999999999999999999999 999999999999999999999999999866432
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHc-Cc----cc
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH------QVEQAIRN-GT----FS 615 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~------~~~~~i~~-~~----~~ 615 (701)
.. ........||+.|+|||++....|+.++|||||||+||||++|+.||.... .....+.. +. +.
T Consensus 239 ~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~ 314 (392)
T PHA03207 239 PD----TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFP 314 (392)
T ss_pred cc----cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccC
Confidence 11 112245679999999999999999999999999999999999998885431 11111110 00 00
Q ss_pred c------------ccCccCCCC--C-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 616 E------------LLDPTVTGW--P-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 616 ~------------~ld~~~~~~--p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
. ........+ | ......+.+++.+||..+|++||++.+++.|+|++-
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~ 380 (392)
T PHA03207 315 QNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTK 380 (392)
T ss_pred CccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhc
Confidence 0 000000000 0 012346889999999999999999999999999964
No 154
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=2.1e-37 Score=332.51 Aligned_cols=242 Identities=26% Similarity=0.306 Sum_probs=191.0
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHH-HHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVE-ILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.. .+..||+|++..... .....+..|.. +++.++||||+++++.+.. ..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3699999999999998 456799999865422 22234555655 4677999999999988844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---- 150 (325)
T cd05604 81 GELFFHLQR---ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS---- 150 (325)
T ss_pred CCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC----
Confidence 999888743 346889999999999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||...+... ..+..+.. ..+...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~---------~~~~~~ 219 (325)
T cd05604 151 --DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL---------VLRPGA 219 (325)
T ss_pred --CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc---------cCCCCC
Confidence 11245679999999999999999999999999999999999999997654321 22222211 111123
Q ss_pred HHHHHHHHHHhhccCcCCCCCh----hhhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDL----VSVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~----~~vl~~~~~~l 662 (701)
...+.+++.+||..+|.+||++ .+++.|+|+.-
T Consensus 220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~ 256 (325)
T cd05604 220 SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFES 256 (325)
T ss_pred CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCC
Confidence 3457899999999999999987 48889988764
No 155
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.3e-37 Score=321.68 Aligned_cols=259 Identities=23% Similarity=0.345 Sum_probs=203.5
Q ss_pred HHHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceec---
Q 005343 386 IEEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACP--- 459 (701)
Q Consensus 386 ~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~--- 459 (701)
..++....+.|++.+.||.|+||.||+|.+ .+..||+|++.... .....+..|+.++.++ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 8 LSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 345555678899999999999999999998 45569999886543 2345688999999998 7999999999873
Q ss_pred -----CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEE
Q 005343 460 -----EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKI 534 (701)
Q Consensus 460 -----~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL 534 (701)
+..|++|||+.+|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||+|+||+++.++.+||
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~~~l 162 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTK-GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAEVKL 162 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEE
Confidence 23489999999999999885432 345788888999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH
Q 005343 535 SDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI 609 (701)
Q Consensus 535 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i 609 (701)
+|||++....... .......|++.|+|||.+. ...++.++|||||||++|+|++|++||..........
T Consensus 163 ~dfg~~~~~~~~~------~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~ 236 (282)
T cd06636 163 VDFGVSAQLDRTV------GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF 236 (282)
T ss_pred eeCcchhhhhccc------cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh
Confidence 9999987653211 1123457899999999875 3468889999999999999999999996554333222
Q ss_pred HcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 610 RNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 610 ~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.... ...+.. .+...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 237 ~~~~---~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 237 LIPR---NPPPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred hHhh---CCCCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 1111 001111 112234569999999999999999999999999884
No 156
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1e-36 Score=336.20 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=197.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCC-CCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQG-PRQFKQEVEILGSMR-HTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~-HpnIv~l~g~~~~-- 460 (701)
..+.|.+.++||+|+||.||+|.+.+ ..||||++....... ...+.+|+.+|+.+. ||||++++|+|.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 45689999999999999999998632 249999997654332 356899999999996 9999999999954
Q ss_pred CCceEEeecCCCChhhHhcccC----------------------------------------------------------
Q 005343 461 YGCLVYEYMENGSLEDRLFQKD---------------------------------------------------------- 482 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~---------------------------------------------------------- 482 (701)
..||||||+++|+|.++|....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 4589999999999999885421
Q ss_pred -----------------------------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc
Q 005343 483 -----------------------------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD 527 (701)
Q Consensus 483 -----------------------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~ 527 (701)
....+++..+..++.||+.||.|||+.+ |+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 1134788889999999999999999999 99999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch---
Q 005343 528 QNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--- 603 (701)
Q Consensus 528 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--- 603 (701)
.++.+||+|||+++.+..... ........+++.|+|||.+.+..++.++|||||||++|+|++ |..||....
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~ 347 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSN----YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS 347 (400)
T ss_pred CCCEEEEEeCCcceecccccc----ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH
Confidence 999999999999986532211 111234457788999999998899999999999999999997 888886432
Q ss_pred HHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 604 QVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 604 ~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.....+..+.. ...+...+..+.+++.+||..+|.+||++.+++.
T Consensus 348 ~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~ 392 (400)
T cd05105 348 TFYNKIKSGYR--------MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD 392 (400)
T ss_pred HHHHHHhcCCC--------CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence 22222332211 1122334556899999999999999999998763
No 157
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.6e-36 Score=314.39 Aligned_cols=247 Identities=26% Similarity=0.454 Sum_probs=198.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
..++|.+.+.||+|+||.||+|.+. ++.||+|.+.... .....+.+|+.++++++||||+++++++.. ..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 3467999999999999999999974 4569999987653 345679999999999999999999998854 35899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+.....
T Consensus 83 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05068 83 MKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDIY 158 (261)
T ss_pred ccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence 99999999985533 346899999999999999999999999 99999999999999999999999999987642211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
. .......+..|+|||++.+..++.++||||||+++|+|+| |++||...... ...+..+ +. . ..
T Consensus 159 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~---~----~~ 225 (261)
T cd05068 159 E-----AREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YR---M----PC 225 (261)
T ss_pred c-----ccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CC---C----CC
Confidence 0 1112223467999999999999999999999999999999 99999754432 2222221 11 0 11
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 226 ~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 226 PPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred CCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 2233456899999999999999999999873
No 158
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.4e-36 Score=315.78 Aligned_cols=248 Identities=29% Similarity=0.462 Sum_probs=197.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-----ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.++|.+.+.||+|+||.||+|.+.. ..|+||++...... ....|.+|+.+++.++||||+++++++.+ ..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 3568999999999999999998842 35999988765432 23468899999999999999999998844 4489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 83 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 83 ITEYMENGSLDKFLREND--GKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEEcCCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 999999999999985533 36899999999999999999999999 9999999999999999999999999998774
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~ 621 (701)
.... ........+++.|+|||++.+..++.++||||||+++|+|++ |..||..... ....+..+.. .+
T Consensus 158 ~~~~----~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~----~~- 228 (266)
T cd05033 158 DSEA----TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYR----LP- 228 (266)
T ss_pred cccc----ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC----CC-
Confidence 2111 111123345678999999998899999999999999999998 9999854332 2223332211 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 229 ---~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 229 ---PPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 122334568999999999999999999999753
No 159
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=304.20 Aligned_cols=259 Identities=20% Similarity=0.298 Sum_probs=204.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee-------cCCC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC-------PEYG 462 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~-------~~~~ 462 (701)
..++|++.+.||+|||+.||++.. .+..+|+|.+......+.+...+|++..++++|||++++++++ .+..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 457899999999999999999986 4455999999888777888899999999999999999999876 2234
Q ss_pred ceEEeecCCCChhhHhcccC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 463 CLVYEYMENGSLEDRLFQKD-NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
||+++|...|+|.+.+.... .+..+++.+++.|+.+|+.||.+||...| |+.||||||+|||+...+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~-~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEP-PYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCC-cccccCCCcceeEecCCCceEEEeccCcc
Confidence 89999999999999997653 34479999999999999999999999885 89999999999999999999999999998
Q ss_pred ccCCCCCcc---cccccccccccCCCccCcccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcC-cc
Q 005343 542 LVPPSAADT---ITQYHMTTAAGTFCYIDPEYQQTG---MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNG-TF 614 (701)
Q Consensus 542 ~~~~~~~~~---~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~-~~ 614 (701)
..+-..... ...........|..|+|||.+.-. ..+.++|||||||+||.|+.|..||.. ....| .+
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~------~~~~GgSl 251 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER------IYQQGGSL 251 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH------HhhcCCeE
Confidence 764322111 111122345678999999987654 468899999999999999999999942 22222 22
Q ss_pred ccccCccCCCCCH--HHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 615 SELLDPTVTGWPV--EAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 615 ~~~ld~~~~~~p~--~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.......-..||. ..+..+.+++..|++.||.+||++.+++.+
T Consensus 252 aLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~ 296 (302)
T KOG2345|consen 252 ALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK 296 (302)
T ss_pred EEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence 1111110112221 245569999999999999999999999854
No 160
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.1e-36 Score=320.86 Aligned_cols=253 Identities=27% Similarity=0.423 Sum_probs=200.8
Q ss_pred cCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.+|.+.+.||+|+||.||++... +..+|+|.+..........+.+|+.++++++||||++++++|.+ ..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46889999999999999999852 23488998876544445678999999999999999999999853 4589
Q ss_pred EEeecCCCChhhHhcccC----------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEE
Q 005343 465 VYEYMENGSLEDRLFQKD----------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKI 534 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL 534 (701)
||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999885432 2235899999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHc
Q 005343 535 SDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRN 611 (701)
Q Consensus 535 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~ 611 (701)
+|||+++.+.... .........++..|+|||++.+..++.++|||||||++|+|+| |.+||..... ....+..
T Consensus 162 ~dfg~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~ 237 (288)
T cd05093 162 GDFGMSRDVYSTD----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ 237 (288)
T ss_pred ccCCccccccCCc----eeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence 9999998653221 1111234456788999999998899999999999999999998 9999865432 2233444
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.... .+...+..+.+++.+||+.+|.+||++.+++ ..+..+
T Consensus 238 ~~~~~--------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~-~~l~~~ 279 (288)
T cd05093 238 GRVLQ--------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIH-SLLQNL 279 (288)
T ss_pred CCcCC--------CCCCCCHHHHHHHHHHccCChhhCCCHHHHH-HHHHHH
Confidence 43221 1122334689999999999999999999985 345544
No 161
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.5e-36 Score=316.82 Aligned_cols=251 Identities=23% Similarity=0.384 Sum_probs=198.7
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCc----eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecCC-CceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHT----SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPEY-GCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~----~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~-~~lV 465 (701)
+.|++.+.||+|+||.||+|.+ .+. .|++|.+...... ....+..|+.+++.++||||++++|++... .+++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i 86 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLV 86 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEE
Confidence 4588889999999999999998 333 3777877543221 234678888899999999999999998543 4799
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+||+++|+|.+++.... ..+++..+..|+.||+.||.|||+.+ ++||||||+|||++.++.+||+|||+++.+.+
T Consensus 87 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 87 TQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999999986433 35899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~~ 622 (701)
... ........++..|++||++.++.++.++|||||||++|||+| |++||.... .....+..+....
T Consensus 162 ~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~------ 231 (279)
T cd05111 162 DDK----KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLA------ 231 (279)
T ss_pred CCc----ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC------
Confidence 221 112234567788999999998999999999999999999998 999997543 2334444443211
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+..++..+..++.+||..+|..||++.+++. .+..+
T Consensus 232 --~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~-~l~~~ 268 (279)
T cd05111 232 --QPQICTIDVYMVMVKCWMIDENVRPTFKELAN-EFTRM 268 (279)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH-HHHHH
Confidence 11123345788999999999999999999864 55554
No 162
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.3e-36 Score=313.94 Aligned_cols=245 Identities=30% Similarity=0.452 Sum_probs=197.9
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYME 470 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 470 (701)
.++|.+.++||+|+||.||+|.+.+ ..||+|++.... .....+.+|+.+++.++||||+++++.+.+ ..++||||++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~ 83 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 83 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCC
Confidence 4569999999999999999998854 469999987543 345678999999999999999999998744 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+......
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 84 KGSLLDFLKGE-MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred CCcHHHHHhhc-cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 99999998643 2345789999999999999999999999 999999999999999999999999999876432210
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
......++..|++||+..+..++.++|||||||++|+|+| |++||...... ...+..+.. ...+.
T Consensus 159 ----~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~ 226 (262)
T cd05071 159 ----ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR--------MPCPP 226 (262)
T ss_pred ----cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC--------CCCcc
Confidence 1123456778999999988899999999999999999999 88899654322 122221110 01123
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
..+..+.+++.+|++.+|.+||++.+++
T Consensus 227 ~~~~~l~~li~~~l~~~p~~Rp~~~~~~ 254 (262)
T cd05071 227 ECPESLHDLMCQCWRKEPEERPTFEYLQ 254 (262)
T ss_pred ccCHHHHHHHHHHccCCcccCCCHHHHH
Confidence 4455689999999999999999999987
No 163
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.1e-36 Score=319.11 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=198.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|++...||+|+||.||+|.+. +..||+|++..... ...+.+.+|+.+++.++|||+++++++|.+ ..++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46899999999999999999984 56799998865432 223568899999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++++|..++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07847 81 YCDHTVLNELEKN---PRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGPG 154 (286)
T ss_pred ccCccHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCCc
Confidence 9999888776532 235899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Ccc--------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GTF-------- 614 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~~-------- 614 (701)
. ......++..|+|||++.+ ..++.++|||||||++|+|+||++||......+..... +..
T Consensus 155 ~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07847 155 D------DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF 228 (286)
T ss_pred c------cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence 1 1234467889999998765 55889999999999999999999999765543322110 000
Q ss_pred ------ccccCccCCC-CC-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 615 ------SELLDPTVTG-WP-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 615 ------~~~ld~~~~~-~p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.....+.... .+ ...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence 0000000000 00 1124568899999999999999999999999885
No 164
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.5e-36 Score=326.07 Aligned_cols=261 Identities=18% Similarity=0.207 Sum_probs=195.3
Q ss_pred eeeeeeec--CceeEEEEEEC--CceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeec
Q 005343 398 ISRKIGEG--GYGPVYKAQLD--HTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYM 469 (701)
Q Consensus 398 ~~~~IG~G--~fg~Vyk~~~~--~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~ 469 (701)
++++||+| +||+||++... +..||+|.+....... ...+.+|+.+++.++||||++++++|. +..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45789999 78999999884 4569999987654322 345788999999999999999999984 3458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC-
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA- 548 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~- 548 (701)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.++++|||.+........
T Consensus 82 ~~~~l~~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHF-MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 9999999885432 235889999999999999999999999 99999999999999999999999987644321110
Q ss_pred cccccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--HcCccccccCcc---
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI--RNGTFSELLDPT--- 621 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i--~~~~~~~~ld~~--- 621 (701)
............++..|+|||++.+ ..++.++|||||||++|+|++|++||.......... ..+......+..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIP 237 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchh
Confidence 0000011123457788999999876 458999999999999999999999997543221111 111111111100
Q ss_pred ----------------------------------CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 622 ----------------------------------VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 622 ----------------------------------~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...+.......+.+|+.+||+.+|.+||++.+++.|+|++-
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~ 312 (327)
T cd08227 238 AEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 312 (327)
T ss_pred hhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence 00011123456899999999999999999999999999964
No 165
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=338.79 Aligned_cols=254 Identities=23% Similarity=0.367 Sum_probs=212.4
Q ss_pred hcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey 468 (701)
.+.|.++..||.|+||.||+|..+.+. .|-|++........+.|.-||+||..++||+||+|+++| ....+++.||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 345778889999999999999998776 567888776667778899999999999999999999875 4455899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|.||-.+..+...+ .+|++.++..++.|++.||.|||+.+ |||||||..|||++-+|.++|+|||.+...
T Consensus 111 C~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn----- 180 (1187)
T KOG0579|consen 111 CGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKN----- 180 (1187)
T ss_pred cCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccc-----
Confidence 99999988876544 46899999999999999999999999 999999999999999999999999987542
Q ss_pred cccccccccccccCCCccCccc-----ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEY-----QQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~-----~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~ 623 (701)
..+..+..+++||++|||||+ +...+|+.++||||||++|.||..+.||....+.++..+.-.+- -.|.+
T Consensus 181 -~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS---ePPTL- 255 (1187)
T KOG0579|consen 181 -KSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS---EPPTL- 255 (1187)
T ss_pred -hhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc---CCCcc-
Confidence 233445578899999999996 55678999999999999999999999998777666655543221 11221
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
-.|......|.+|+.+||..+|+.||++.+++.|+|..
T Consensus 256 lqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 256 LQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred cCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 22445556799999999999999999999999999987
No 166
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2.2e-36 Score=313.13 Aligned_cols=245 Identities=29% Similarity=0.494 Sum_probs=197.9
Q ss_pred hcCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYME 470 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 470 (701)
.++|.+.++||+|+||.||+|... +..||+|.+.... .....+.+|+.++++++|||++++++++.+ ..+++|||++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~ 83 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT-MSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMS 83 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC-CCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecC
Confidence 356888999999999999999874 4569999987654 345679999999999999999999998854 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+.....
T Consensus 84 ~~~L~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 84 KGSLLDFLKDG-EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 99999988543 2345899999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......++..|+|||++.+..++.++||||||+++|+|++ |++||......+ ..+..+. ....+.
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 226 (260)
T cd05070 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGY--------RMPCPQ 226 (260)
T ss_pred ---ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------CCCCCC
Confidence 01122345678999999988889999999999999999999 899996544322 2222211 011233
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
..+..+.+++.+||..+|.+||++.+++
T Consensus 227 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~ 254 (260)
T cd05070 227 DCPISLHELMLQCWKKDPEERPTFEYLQ 254 (260)
T ss_pred cCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 4455699999999999999999999886
No 167
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=7.1e-37 Score=320.07 Aligned_cols=249 Identities=24% Similarity=0.373 Sum_probs=201.9
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
.|...+.||+|+||.||+|.+. +..||+|.+..... .....+.+|+.+++.++||||+++++.|.. ..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3667788999999999999874 55699999875542 223468999999999999999999998844 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++++|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..+....
T Consensus 85 ~~~~L~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06642 85 GGGSALDLLKP----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc--
Confidence 99999988732 45889999999999999999999999 9999999999999999999999999997664321
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCCH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......|+..|+|||++.+..++.++|||||||++|+|+||++||........ .+..+. ....+.
T Consensus 156 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 223 (277)
T cd06642 156 ----IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS--------PPTLEG 223 (277)
T ss_pred ----hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCC--------CCCCCc
Confidence 112334688999999999998999999999999999999999999864432211 111111 112223
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
..+..+.+++.+||..+|.+||++.+++.|+|+.-..
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06642 224 QYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT 260 (277)
T ss_pred ccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence 4455689999999999999999999999999987543
No 168
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.7e-36 Score=352.54 Aligned_cols=264 Identities=24% Similarity=0.299 Sum_probs=204.0
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.++||+|+||.||+|.+. ++.||||++....... ...+.+|+.+++.++||||+++++++.+ ..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999984 5679999997654332 3468999999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccC--------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 467 EYMENGSLEDRLFQKD--------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
||++||+|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999885421 1234567788899999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcc------------cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH
Q 005343 539 LARLVPPSAADT------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE 606 (701)
Q Consensus 539 la~~~~~~~~~~------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~ 606 (701)
+++......... .........+||+.|+|||++.+..++.++|||||||++|||+||++||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998762111000 00011234579999999999999999999999999999999999999997543221
Q ss_pred HHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 607 QAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 607 ~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.... .. +.++....-....+..+.+++.+|+..+|++||+..+.+...+.....
T Consensus 239 i~~~-~~---i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYR-DV---ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-hh---ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1111 11 111111000113345689999999999999999988888887777643
No 169
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-36 Score=316.30 Aligned_cols=247 Identities=23% Similarity=0.387 Sum_probs=193.6
Q ss_pred ceeeeeeeecCceeEEEEEECCc----eEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--------C
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHT----SVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--------Y 461 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~----~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~ 461 (701)
|.+.+.||+|+||.||+|.+... .||+|.+..... .....+.+|+.+++.++||||++++++|.. .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 35678899999999999998543 489998876532 224568899999999999999999998632 2
Q ss_pred CceEEeecCCCChhhHhccc---CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 462 GCLVYEYMENGSLEDRLFQK---DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
.+++|||+.+|+|.+++... .....+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 37999999999999887432 22345899999999999999999999998 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFS 615 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~ 615 (701)
+++.+...... .......+++.|++||++....++.++|||||||++|+|++ |++||..... ....+..+...
T Consensus 158 ~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (272)
T cd05075 158 LSKKIYNGDYY----RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL 233 (272)
T ss_pred cccccCcccce----ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC
Confidence 99876432210 01123346778999999999999999999999999999999 8899975433 22233333211
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
..+...+..+.+++.+||+.+|.+||++.+++.+
T Consensus 234 --------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 234 --------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1112234458999999999999999999999753
No 170
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4e-37 Score=331.38 Aligned_cols=255 Identities=25% Similarity=0.304 Sum_probs=197.8
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||++.+. +..||+|++.... ......+.+|+.++..++||||+.+++++.+ ..|+||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57999999999999999999984 4569999986532 1223457889999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 Ey~~gg~L~~~l~~~~--~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 9999999999986532 35788899999999999999999999 999999999999999999999999999866432
Q ss_pred CCcccccccccccccCCCccCcccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HHcCccccccC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQT-----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IRNGTFSELLD 619 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~~~~~~~~ld 619 (701)
.. .......||+.|+|||++.+ +.++.++|||||||+||+|++|++||...+..... +.......-+.
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p 230 (331)
T cd05624 156 GT-----VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 230 (331)
T ss_pred Cc-----eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCC
Confidence 11 11234579999999998875 56889999999999999999999999765433221 11111000011
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCC--CCChhhhhhHHHHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRD--RPDLVSVVLPELIRL 662 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~--RPt~~~vl~~~~~~l 662 (701)
+.. ...+..+.+++.+|+...+++ |+++.+++.|+|++-
T Consensus 231 ~~~----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~ 271 (331)
T cd05624 231 SHI----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEG 271 (331)
T ss_pred Ccc----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence 111 122446889999998866554 578999999988753
No 171
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=5.7e-37 Score=317.28 Aligned_cols=246 Identities=27% Similarity=0.468 Sum_probs=200.7
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
...+|.+.++||.|+||.||+|.+. +..+++|++..........+..|+.+++.++||||+++++++.+ ..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 3456888999999999999999985 45699999887665556789999999999999999999998844 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+++.... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 84 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 99999999986543 346899999999999999999999999 99999999999999999999999999987633211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
......++..|++||.+....++.++||||||+++|+|++ |+.||...... -..+..+. ....
T Consensus 160 ------~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~~~~ 225 (261)
T cd05148 160 ------LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY--------RMPC 225 (261)
T ss_pred ------cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC--------cCCC
Confidence 1123446778999999988899999999999999999998 89999655422 12222111 0112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
+...+..+.+++.+||..+|.+||++.+++
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~ 255 (261)
T cd05148 226 PAKCPQEIYKIMLECWAAEPEDRPSFKALR 255 (261)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 234445689999999999999999999987
No 172
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.7e-36 Score=317.36 Aligned_cols=250 Identities=24% Similarity=0.374 Sum_probs=196.4
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 462 (701)
.++|.+.+.||+|+||.||+|.+.+ ..|++|.+....... ...|.+|+.+++.++||||+++++++.+ ..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR 84 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence 4679999999999999999999854 458888876543222 3458999999999999999999998744 45
Q ss_pred ceEEeecCCCChhhHhcccCC----CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC---cEEEE
Q 005343 463 CLVYEYMENGSLEDRLFQKDN----SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY---VSKIS 535 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~---~~KL~ 535 (701)
++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ ++||||||+|||++.++ .+||+
T Consensus 85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl~ 161 (277)
T cd05036 85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKIA 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEec
Confidence 899999999999998865432 235899999999999999999999999 99999999999998654 68999
Q ss_pred eeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcC
Q 005343 536 DVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNG 612 (701)
Q Consensus 536 DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~ 612 (701)
|||+++.+..... ........++..|+|||++.+..++.++|||||||++|+|++ |+.||..... ....+..+
T Consensus 162 dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 237 (277)
T cd05036 162 DFGMARDIYRASY----YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG 237 (277)
T ss_pred cCccccccCCccc----eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC
Confidence 9999987632211 011122334568999999999999999999999999999997 9999975432 22222211
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 613 TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 613 ~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
. ...+|...+..+.+++.+||+.+|.+||++.+++.|
T Consensus 238 ~--------~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~ 274 (277)
T cd05036 238 G--------RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER 274 (277)
T ss_pred C--------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 1 112233445578999999999999999999999865
No 173
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.8e-37 Score=332.34 Aligned_cols=241 Identities=24% Similarity=0.282 Sum_probs=189.5
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHH-HHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVE-ILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|++. +..||+|++..... .....+..|+. +++.++||||+++++.|.+ ..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999984 56699999865421 12234555554 6788999999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|...+... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~l~~~---~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---- 150 (321)
T cd05603 81 GELFFHLQRE---RCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE---- 150 (321)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC----
Confidence 9998887442 35788888899999999999999999 9999999999999999999999999987532111
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||...+.. ...+..+. ...|...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~---------~~~~~~~ 219 (321)
T cd05603 151 --ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP---------LQLPGGK 219 (321)
T ss_pred --CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC---------CCCCCCC
Confidence 1124457999999999999989999999999999999999999999765432 12222111 1223334
Q ss_pred HHHHHHHHHHhhccCcCCCCCh----hhhhhHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDL----VSVVLPELIR 661 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~----~~vl~~~~~~ 661 (701)
...+.+++.+||+.+|.+||+. .+++.|.|+.
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~ 255 (321)
T cd05603 220 TVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFS 255 (321)
T ss_pred CHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcC
Confidence 4568999999999999999975 4888887764
No 174
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-36 Score=313.24 Aligned_cols=239 Identities=24% Similarity=0.362 Sum_probs=191.7
Q ss_pred eeeecCceeEEEEEE----CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceec-CCCceEEeecCCCC
Q 005343 401 KIGEGGYGPVYKAQL----DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACP-EYGCLVYEYMENGS 473 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~----~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~-~~~~lV~Ey~~~gs 473 (701)
.||+|+||.||+|.+ .+..+|+|++...... ....+.+|+.+++.++||||++++|++. +..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 589999999999976 2456999998755422 2356899999999999999999999984 44589999999999
Q ss_pred hhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccc
Q 005343 474 LEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQ 553 (701)
Q Consensus 474 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~ 553 (701)
|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+...... .
T Consensus 82 L~~~l~~~---~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~---~ 152 (257)
T cd05116 82 LNKFLQKN---KHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENY---Y 152 (257)
T ss_pred HHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCe---e
Confidence 99988533 35889999999999999999999999 999999999999999999999999999876432211 0
Q ss_pred ccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHH
Q 005343 554 YHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 554 ~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
.......++..|+|||.+....++.++|||||||++|||+| |++||..... ....+..+... ..|...+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~--------~~~~~~~ 224 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERM--------ECPQRCP 224 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC--------CCCCCCC
Confidence 11123345678999999988889999999999999999998 9999975432 33344433211 2233345
Q ss_pred HHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 631 LSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+.+++.+||+.+|.+||++.+|+.
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHH
Confidence 56899999999999999999999863
No 175
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=336.66 Aligned_cols=247 Identities=29% Similarity=0.460 Sum_probs=208.2
Q ss_pred eeeecCceeEEEEEECCce--EEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecCCCc--eEEeecCCCChhh
Q 005343 401 KIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEYGC--LVYEYMENGSLED 476 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~~--lV~Ey~~~gsL~~ 476 (701)
.||+|.||+||-|++.++. +|||-+.........-+..||.+.+.|+|.|||+++|.|.++++ +.||-++||||.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999997776 68887766555556668999999999999999999999988775 7999999999999
Q ss_pred HhcccCCCCCC--ChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc-CCCcEEEEeeccccccCCCCCccccc
Q 005343 477 RLFQKDNSPPI--HWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD-QNYVSKISDVGLARLVPPSAADTITQ 553 (701)
Q Consensus 477 ~l~~~~~~~~l--~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~-~~~~~KL~DFGla~~~~~~~~~~~~~ 553 (701)
+|..+ ..|+ .+.+.-.+..||++||.|||.+. |||||||-+|+|++ -.|.+||+|||-++.+..-.
T Consensus 662 LLrsk--WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgin------ 730 (1226)
T KOG4279|consen 662 LLRSK--WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGIN------ 730 (1226)
T ss_pred HHHhc--cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhccCC------
Confidence 98544 3455 77888889999999999999999 99999999999996 58999999999998763221
Q ss_pred ccccccccCCCccCcccccCCC--CCchhhHHHHHHHHHHHHhCCCCCC-CchHHHHHHHcCccccccCccCCCCCHHHH
Q 005343 554 YHMTTAAGTFCYIDPEYQQTGM--LGVKSDLYSLGVVLLQLITARPAMG-LSHQVEQAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 554 ~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~-~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
....++.||+.|||||++..+. |+..+|||||||++.||.||+|||- +.+....+++-|.+. .-+..|.+.+
T Consensus 731 P~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyK-----vHP~iPeels 805 (1226)
T KOG4279|consen 731 PCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYK-----VHPPIPEELS 805 (1226)
T ss_pred ccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhccee-----cCCCCcHHHH
Confidence 1235678999999999987764 9999999999999999999999995 333334456666543 2346678888
Q ss_pred HHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
.+...+|.+|+..+|.+||++.++|..+|.+-.
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 889999999999999999999999999998875
No 176
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=6e-37 Score=330.08 Aligned_cols=254 Identities=24% Similarity=0.293 Sum_probs=196.4
Q ss_pred cCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.++||+|+||.||++.+.+ ..||+|++.+.. ......+..|+.++..++||||+.+++.+.+ ..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 468999999999999999999854 459999986422 1223347889999999999999999998844 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++.+.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 81 ey~~~g~L~~~l~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 9999999999986432 35888899999999999999999999 999999999999999999999999998765322
Q ss_pred CCcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HHcCccccccC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IRNGTFSELLD 619 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~~~~~~~~ld 619 (701)
.. ......+||+.|+|||++. ...++.++|||||||+||||++|++||...+..... +...... .
T Consensus 156 ~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~-- 227 (332)
T cd05623 156 GT-----VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER-F-- 227 (332)
T ss_pred Cc-----ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcc-c--
Confidence 11 1123457999999999876 356899999999999999999999999765533222 2111100 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCC--CCChhhhhhHHHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRD--RPDLVSVVLPELIR 661 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~--RPt~~~vl~~~~~~ 661 (701)
.....+...+..+.+++.+|+..++.+ ||++.+++.|+|+.
T Consensus 228 -~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~ 270 (332)
T cd05623 228 -QFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFT 270 (332)
T ss_pred -cCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcC
Confidence 011111233456888999988654444 78999999998765
No 177
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-36 Score=339.04 Aligned_cols=253 Identities=21% Similarity=0.262 Sum_probs=196.3
Q ss_pred hcCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
...|.+.+.||+|+||.||+|.+.. ..||||... ...+.+|+++|++++|||||++++++.. ..|+||||
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 4579999999999999999999854 559999532 2346789999999999999999998743 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+ .++|.+++.... ..+++..+..|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.+.....
T Consensus 242 ~-~~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~ 315 (461)
T PHA03211 242 Y-RSDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS 315 (461)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence 9 578888875432 36899999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCC-CCCc---------hHHHHHHHcCcccccc
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPA-MGLS---------HQVEQAIRNGTFSELL 618 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~p-f~~~---------~~~~~~i~~~~~~~~l 618 (701)
.......+||+.|+|||++.+..++.++|||||||+||||++|..| |... ..+...+....+....
T Consensus 316 ----~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 316 ----TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred ----cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 1112346799999999999999999999999999999999998754 3321 2233344332211000
Q ss_pred Cc-----------------------cCCCCCH--HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 619 DP-----------------------TVTGWPV--EAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 619 d~-----------------------~~~~~p~--~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.+ ....|.. .....+.+|+.+||+.||++||++.++|.|+|++
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~ 459 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ 459 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence 00 0011211 1123578999999999999999999999999985
No 178
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.7e-36 Score=316.01 Aligned_cols=252 Identities=25% Similarity=0.369 Sum_probs=200.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--Cc----eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC-CCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HT----SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE-YGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~----~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~l 464 (701)
.++|.+.+.||+|+||.||+|.+. +. .||+|++...... ....+.+|+.++..+.||||+.++++|.. ..++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l 85 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQL 85 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEE
Confidence 356899999999999999999873 32 3899998765432 24568899999999999999999999854 4579
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
+|||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 86 ~~~~~~~g~l~~~l~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 86 VTQLMPYGCLLDYVREN--KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEcCCCCCHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceeecc
Confidence 99999999999988543 245899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~ 621 (701)
.... ........+++.|++||...+..++.++|||||||++|||+| |.+||.... .....+..+....
T Consensus 161 ~~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----- 231 (279)
T cd05109 161 IDET----EYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLP----- 231 (279)
T ss_pred cccc----eeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCC-----
Confidence 3221 111223345678999999988899999999999999999998 999996543 2333344332111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+...+..+.+++.+||..+|..||++.+++ +.|..+
T Consensus 232 ---~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~-~~l~~~ 268 (279)
T cd05109 232 ---QPPICTIDVYMIMVKCWMIDSECRPRFRELV-DEFSRM 268 (279)
T ss_pred ---CCccCCHHHHHHHHHHcCCChhhCcCHHHHH-HHHHHh
Confidence 1223345689999999999999999999987 555554
No 179
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=1.6e-36 Score=320.06 Aligned_cols=253 Identities=26% Similarity=0.414 Sum_probs=201.0
Q ss_pred cCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.+|.+.+.||+|+||.||+|... ...+++|.+..........+.+|+.+++.++||||+++++++.+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35888999999999999999853 23488888865544445679999999999999999999999854 4489
Q ss_pred EEeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc
Q 005343 465 VYEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV 531 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~ 531 (701)
||||+++++|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 999999999999986532 1234899999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHH
Q 005343 532 SKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQA 608 (701)
Q Consensus 532 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~ 608 (701)
+||+|||++....... .........++..|+|||++....++.++|||||||++|+|+| |++||..... ....
T Consensus 162 ~~l~dfg~a~~~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~ 237 (291)
T cd05094 162 VKIGDFGMSRDVYSTD----YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC 237 (291)
T ss_pred EEECCCCcccccCCCc----eeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 9999999997653221 1111234567889999999999999999999999999999999 9999854432 2223
Q ss_pred HHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 609 IRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 609 i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+..+.... .+...+..+.+++.+||+.+|.+||++.+++ ..+..+
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~-~~l~~~ 282 (291)
T cd05094 238 ITQGRVLE--------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIY-KILHAL 282 (291)
T ss_pred HhCCCCCC--------CCccCCHHHHHHHHHHcccChhhCcCHHHHH-HHHHHH
Confidence 33333221 1223345689999999999999999999996 455554
No 180
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=7.4e-37 Score=330.29 Aligned_cols=251 Identities=27% Similarity=0.406 Sum_probs=198.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-- 460 (701)
..++|++.+.||+|+||.||+|...+ +.||+|++...... ....+.+|+.++.++ +||||++++++|..
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 34579999999999999999997532 45999998754322 234578899999999 89999999998843
Q ss_pred -CCceEEeecCCCChhhHhcccCC--------------------------------------------------------
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDN-------------------------------------------------------- 483 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------------- 483 (701)
..+++|||+++|+|.+++.....
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 34789999999999998854321
Q ss_pred --CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccccccccccc
Q 005343 484 --SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAG 561 (701)
Q Consensus 484 --~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~g 561 (701)
..++++..+..++.||+.||.|||+.+ |+||||||.|||++.++.+||+|||+++.+..... ........+
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~----~~~~~~~~~ 237 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVRKGDARL 237 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcc----hhhccCCCC
Confidence 136899999999999999999999999 99999999999999999999999999987633211 111234456
Q ss_pred CCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch---HHHHHHHcCccccccCccCCCCCHHHHHHHHHHH
Q 005343 562 TFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH---QVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLA 637 (701)
Q Consensus 562 t~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li 637 (701)
+..|+|||++.+..++.++|||||||+||+|++ |.+||.... .....+..+... ..|......+.+++
T Consensus 238 ~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~l~ 309 (337)
T cd05054 238 PLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM--------RAPEYATPEIYSIM 309 (337)
T ss_pred CccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC--------CCCccCCHHHHHHH
Confidence 778999999999999999999999999999998 999986432 223333333221 11223345689999
Q ss_pred HHhhccCcCCCCChhhhhhH
Q 005343 638 LQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 638 ~~cl~~~P~~RPt~~~vl~~ 657 (701)
.+||+.+|.+||++.+++.+
T Consensus 310 ~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 310 LDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred HHHccCChhhCcCHHHHHHH
Confidence 99999999999999999854
No 181
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=2.2e-36 Score=312.69 Aligned_cols=243 Identities=24% Similarity=0.396 Sum_probs=194.7
Q ss_pred CceeeeeeeecCceeEEEEEECCc-eEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHT-SVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~-~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+|++.+.||+|+||.||+|.+... .+|+|++.... .....+.+|+++++.++||||+++++++.+ ..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 477889999999999999988544 59999886543 334578899999999999999999998854 44799999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
++|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~L~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--- 155 (256)
T cd05059 84 GCLLNYLRERK--GKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--- 155 (256)
T ss_pred CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc---
Confidence 99999886543 36899999999999999999999999 99999999999999999999999999986532110
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCccccccCccCCCCCHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.......++..|+|||++.+..++.++||||||+++|+|+| |++||....... ..+..+. . ...|..
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-----~---~~~~~~ 225 (256)
T cd05059 156 --TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY-----R---LYRPKL 225 (256)
T ss_pred --cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC-----c---CCCCCC
Confidence 01112234567999999999999999999999999999999 899997544322 2222221 0 112233
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+..+.+++.+||..+|++||++.+++.
T Consensus 226 ~~~~~~~li~~cl~~~p~~Rpt~~~~l~ 253 (256)
T cd05059 226 APTEVYTIMYSCWHEKPEDRPAFKKLLS 253 (256)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 4556999999999999999999999984
No 182
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.4e-37 Score=319.97 Aligned_cols=247 Identities=26% Similarity=0.377 Sum_probs=196.7
Q ss_pred CceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.|.+.+.||+|+||.||+|.+.+ ..||+|++....... ...+.+|+.++..++||||+++++++.+ ..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 47778899999999999998732 459999987654322 3458899999999999999999999854 4579
Q ss_pred EEeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc
Q 005343 465 VYEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV 531 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~ 531 (701)
++||+.+++|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 999999999999885321 1235888899999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHH
Q 005343 532 SKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQA 608 (701)
Q Consensus 532 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~ 608 (701)
+||+|||+++.+..... ........+++.|+|||.+..+.++.++|||||||++|||+| |.+||..... ....
T Consensus 163 ~kl~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~ 238 (283)
T cd05091 163 VKISDLGLFREVYAADY----YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM 238 (283)
T ss_pred eEecccccccccccchh----eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence 99999999886532211 111234456789999999988889999999999999999998 8888865432 2223
Q ss_pred HHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 609 IRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 609 i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+..+.. ...+..++..+.+++..||+.+|.+||++.+|+.
T Consensus 239 i~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~ 278 (283)
T cd05091 239 IRNRQV--------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS 278 (283)
T ss_pred HHcCCc--------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence 333322 1223445556899999999999999999999974
No 183
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2.7e-36 Score=312.49 Aligned_cols=246 Identities=28% Similarity=0.438 Sum_probs=199.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeec
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYM 469 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~ 469 (701)
..+.|.+.++||+|+||.||+|.. +++.||+|.+.... .....+.+|+.+++.++||||+++++++.+ ..+++|||+
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~ 82 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYM 82 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcC
Confidence 346799999999999999999998 45679999987654 345679999999999999999999998744 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
.+|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 83 ENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 9999999885543 346899999999999999999999999 99999999999999999999999999987642211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p 626 (701)
.......++..|+|||++....++.++||||||+++|+|++ |++||...... ...+..+... ..+
T Consensus 158 ----~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~ 225 (260)
T cd05067 158 ----TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRM--------PRP 225 (260)
T ss_pred ----ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCC--------CCC
Confidence 11123346778999999998899999999999999999999 99999654432 2222222111 112
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
...+..+.+++.+||..+|++||++.+++
T Consensus 226 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05067 226 DNCPEELYELMRLCWKEKPEERPTFEYLR 254 (260)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence 22344699999999999999999999987
No 184
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=3e-36 Score=312.92 Aligned_cols=245 Identities=25% Similarity=0.426 Sum_probs=197.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
..|.+.+.||+|+||.||+|.+. ++.|++|++.... .....+.+|++++..++||||++++++|.. ..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45888999999999999999984 5669999987542 345678999999999999999999999844 447999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++........
T Consensus 85 ~~~~L~~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 85 TYGNLLDYLRECN-RQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred CCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 9999999885432 345899999999999999999999999 99999999999999999999999999987643211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p 626 (701)
.......++..|+|||++.+..++.++|||||||++|||++ |.+||...... ...+..+. ....+
T Consensus 160 ----~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--------~~~~~ 227 (263)
T cd05052 160 ----TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--------RMERP 227 (263)
T ss_pred ----eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--------CCCCC
Confidence 11122334668999999999999999999999999999998 99999754432 12222221 01223
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...+..+.+++.+||..+|.+||++.+++.
T Consensus 228 ~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~ 257 (263)
T cd05052 228 EGCPPKVYELMRACWQWNPSDRPSFAEIHQ 257 (263)
T ss_pred CCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 334456999999999999999999999963
No 185
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=4.1e-36 Score=320.62 Aligned_cols=260 Identities=25% Similarity=0.288 Sum_probs=206.0
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|... +..||+|.+...... ....+..|++++..++||||+++++.+.+ ..|+||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36899999999999999999984 567999998765433 34568899999999999999999999854 348999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+.+++|.+++... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQ-PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhC-CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999987543 3356899999999999999999999999 999999999999999999999999998765322
Q ss_pred CCccc-----------------------ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch
Q 005343 547 AADTI-----------------------TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH 603 (701)
Q Consensus 547 ~~~~~-----------------------~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 603 (701)
..... .........||..|+|||++.+..++.++||||||+++|+|++|+.||...+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11000 0011224578999999999998889999999999999999999999997665
Q ss_pred HHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC----hhhhhhHHHHHH
Q 005343 604 QVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD----LVSVVLPELIRL 662 (701)
Q Consensus 604 ~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt----~~~vl~~~~~~l 662 (701)
......... .... ..... ...+..+.+++.+||..+|.+||+ +.+++.|+|++-
T Consensus 237 ~~~~~~~~~-~~~~---~~~~~-~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~ 294 (316)
T cd05574 237 RDETFSNIL-KKEV---TFPGS-PPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRG 294 (316)
T ss_pred hHHHHHHHh-cCCc---cCCCc-cccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhc
Confidence 432221110 0000 01110 113556999999999999999999 999999999974
No 186
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6e-36 Score=310.10 Aligned_cols=244 Identities=30% Similarity=0.470 Sum_probs=197.2
Q ss_pred cCceeeeeeeecCceeEEEEEECCc-eEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecCC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT-SVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYMEN 471 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~-~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~ 471 (701)
++|.+.+.||+|+||.||+|.+.+. .+++|.+.... .....+.+|+.+++.++|||++++++++.+ ..++||||+.+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~ 84 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGK 84 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCC
Confidence 5689999999999999999998554 69999876543 345678999999999999999999998854 44899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||++..+.....
T Consensus 85 ~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--- 157 (260)
T cd05069 85 GSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--- 157 (260)
T ss_pred CCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCcc---
Confidence 99999886532 345889999999999999999999999 99999999999999999999999999987643211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCccccccCccCCCCCHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.......++..|+|||+..+..++.++|||||||++|+|+| |++||....... ..+..+ +. ...+..
T Consensus 158 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~-------~~~~~~ 227 (260)
T cd05069 158 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERG-YR-------MPCPQG 227 (260)
T ss_pred --cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CC-------CCCCcc
Confidence 01123346778999999988899999999999999999999 899997554322 122211 10 112234
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+..+.+++.+||..+|.+||++.+++
T Consensus 228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~ 254 (260)
T cd05069 228 CPESLHELMKLCWKKDPDERPTFEYIQ 254 (260)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHH
Confidence 455699999999999999999999887
No 187
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.5e-36 Score=316.98 Aligned_cols=249 Identities=26% Similarity=0.401 Sum_probs=198.7
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 462 (701)
.++|.+.+.||+|+||.||+|.+.+ ..|++|.+..... .....+.+|+.+++.++||||++++|++.. ..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4679999999999999999998743 4599999865532 223468899999999999999999999844 45
Q ss_pred ceEEeecCCCChhhHhcccCC-------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEE
Q 005343 463 CLVYEYMENGSLEDRLFQKDN-------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKIS 535 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~ 535 (701)
++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 899999999999999865322 234788999999999999999999999 9999999999999999999999
Q ss_pred eeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcC
Q 005343 536 DVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNG 612 (701)
Q Consensus 536 DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~ 612 (701)
|||+++.+...... .......++..|+|||.+.++.++.++|||||||++|||+| |.+||..... ....+..+
T Consensus 162 dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYY----RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDG 237 (277)
T ss_pred CcccchhhccCccc----ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcC
Confidence 99999865432110 11233456789999999988889999999999999999998 9999965432 22222222
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 613 TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 613 ~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.. ...|...+..+.+++.+||..+|.+||++.+++.
T Consensus 238 ~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 273 (277)
T cd05032 238 GH--------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS 273 (277)
T ss_pred CC--------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 21 1122333556899999999999999999999973
No 188
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.7e-36 Score=310.79 Aligned_cols=240 Identities=26% Similarity=0.413 Sum_probs=196.7
Q ss_pred cCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec---CCCceEEeecC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP---EYGCLVYEYME 470 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~---~~~~lV~Ey~~ 470 (701)
.+|.+.+.||+|+||.||++...++.|++|.+... .....+.+|+.+++.++|||++++++++. ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~ 83 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMA 83 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCC
Confidence 46889999999999999999999999999998654 33567899999999999999999999753 23589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 84 KGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred CCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 999999885533 345889999999999999999999999 9999999999999999999999999987543211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
....++..|+|||++....++.++|||||||++|+|++ |++||..... ....+..+... ..+.
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKM--------DAPD 222 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------CCCC
Confidence 22344568999999998899999999999999999998 9999865432 22333332111 1222
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 251 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFLQLRE 251 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 34456899999999999999999999974
No 189
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.3e-37 Score=329.43 Aligned_cols=241 Identities=25% Similarity=0.278 Sum_probs=188.0
Q ss_pred eeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHH-HHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVE-ILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|++. +..||+|++..... .....+..|.. +++.++||||+.+++.+.+ ..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999984 45599999865321 12233444444 5678999999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..++......++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 ~~L~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~---- 150 (325)
T cd05602 81 GELFYHLQRE---RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---- 150 (325)
T ss_pred CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC----
Confidence 9999988543 34778888889999999999999999 9999999999999999999999999987542211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......+||+.|+|||++.+..++.++|||||||++|+|++|++||....... ..+..... ..+...
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~---------~~~~~~ 219 (325)
T cd05602 151 --GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL---------QLKPNI 219 (325)
T ss_pred --CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc---------CCCCCC
Confidence 11245679999999999999999999999999999999999999997654332 22222111 111233
Q ss_pred HHHHHHHHHHhhccCcCCCCChh----hhhhHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDLV----SVVLPELIR 661 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~----~vl~~~~~~ 661 (701)
+..+.+++.+||+.+|.+||+.. +++.|.|+.
T Consensus 220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~ 255 (325)
T cd05602 220 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFS 255 (325)
T ss_pred CHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccC
Confidence 44689999999999999999876 677776653
No 190
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-37 Score=353.79 Aligned_cols=247 Identities=28% Similarity=0.455 Sum_probs=203.8
Q ss_pred hcCceeeeeeeecCceeEEEEEEC---Cc----eEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecCC--C
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD---HT----SVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPEY--G 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~---~~----~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~ 462 (701)
..+-.+.+.||+|+||.||.|... +. .||||.+..... +....|.+|..+|+.++|||||+++|+|.+. .
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 445677889999999999999973 22 399999877643 3456799999999999999999999999653 4
Q ss_pred ceEEeecCCCChhhHhcccC----CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 463 CLVYEYMENGSLEDRLFQKD----NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
++++|||+||+|..+|.... ....++....+.++.|||.|+.||++++ +|||||-..|+||+....+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 89999999999999996541 2456889999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccccccccccc-ccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH---HHcCc
Q 005343 539 LARLVPPSAADTITQYHMTTA-AGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVEQA---IRNGT 613 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~-~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~---i~~~~ 613 (701)
||+.+-.. ..|+.... .-...|||||.++.+.++.++|||||||+|||++| |..||+..+..+-. .+.|+
T Consensus 848 lArDiy~~-----~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggR 922 (1025)
T KOG1095|consen 848 LARDIYDK-----DYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGR 922 (1025)
T ss_pred hhHhhhhc-----hheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCc
Confidence 99954221 11222222 23458999999999999999999999999999999 88999877654332 33442
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+.|..|+..+.+++.+||+.+|.+||++..|+.
T Consensus 923 ---------L~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~ 956 (1025)
T KOG1095|consen 923 ---------LDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE 956 (1025)
T ss_pred ---------cCCCCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence 2346677778999999999999999999999986
No 191
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.7e-36 Score=314.84 Aligned_cols=253 Identities=23% Similarity=0.333 Sum_probs=205.3
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
.|...+.||.|+||.||+|.+. +..||+|++..... .....+.+|+.+++.++||||+++++.+.+ ..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4777889999999999999874 56799999875432 234568899999999999999999999854 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++.. .++++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+....
T Consensus 85 ~~~~L~~~i~~----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06640 85 GGGSALDLLRA----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc--
Confidence 99999998843 35788899999999999999999999 9999999999999999999999999997663321
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.......++..|+|||++.+..++.++|+|||||++|+|+||.+||............ .. ......+...
T Consensus 156 ----~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~---~~---~~~~~~~~~~ 225 (277)
T cd06640 156 ----IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI---PK---NNPPTLTGEF 225 (277)
T ss_pred ----cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh---hc---CCCCCCchhh
Confidence 1123346888999999998888999999999999999999999999754432211110 00 0012233456
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcc
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLG 666 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~ 666 (701)
+..+.+++.+||..+|.+||++.+++.|+|+......
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~ 262 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKK 262 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchh
Confidence 6779999999999999999999999999998765554
No 192
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.4e-36 Score=313.08 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=195.1
Q ss_pred ceeeeeeeecCceeEEEEEECC-----ceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--------
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE-------- 460 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 460 (701)
|.+.+.||+|+||.||+|.+.. ..||+|.+...... ....+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5678899999999999998732 45999998765432 23568999999999999999999998732
Q ss_pred CCceEEeecCCCChhhHhcccC---CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 461 YGCLVYEYMENGSLEDRLFQKD---NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
..+++|||+++|+|..++.... ....+++.....++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 2479999999999999885432 2246899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCcc
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTF 614 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~ 614 (701)
|+++.+...... .......++..|+|||++....++.++|||||||++|||++ |.+||...... ...+..+..
T Consensus 158 g~~~~~~~~~~~----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05035 158 GLSKKIYSGDYY----RQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNR 233 (273)
T ss_pred cceeeccccccc----cccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence 999876432211 11122345678999999988889999999999999999999 88998655432 222222221
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...|...+..+.+++.+||..+|.+||++.+++.
T Consensus 234 --------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~ 267 (273)
T cd05035 234 --------LKQPEDCLDELYDLMYSCWRADPKDRPTFTKLRE 267 (273)
T ss_pred --------CCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1223344557999999999999999999999974
No 193
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.9e-36 Score=312.30 Aligned_cols=259 Identities=23% Similarity=0.327 Sum_probs=205.2
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
++|++.+.||.|+||.||+|.. .+..+++|++..... .....+.+|+.+++.++|||++++++.+. +..++||||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 4789999999999999999997 455699999875442 24567899999999999999999999874 345899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++........+++.....++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 999999999865443356899999999999999999999999 99999999999999999999999999987644321
Q ss_pred cccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCC-
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWP- 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p- 626 (701)
.. ........|+..|++||++... .++.++|+|||||++|+|++|+.||............... ..+......
T Consensus 158 ~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~ 232 (267)
T cd06610 158 RT--RKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSLETGAD 232 (267)
T ss_pred cc--ccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCcCCccc
Confidence 10 0112345689999999988777 7899999999999999999999999765443222111000 111111111
Q ss_pred -HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 627 -VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 627 -~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 233 YKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred cccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 2334568999999999999999999999999874
No 194
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-36 Score=320.82 Aligned_cols=253 Identities=21% Similarity=0.316 Sum_probs=202.7
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~ 471 (701)
|.....||+|+||.||+|.. .++.|++|++..........+.+|+.++..++||||++++++|. +..++||||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 33445799999999999987 46779999987655555667899999999999999999999874 455899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
++|..++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+.....
T Consensus 103 ~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--- 172 (297)
T cd06659 103 GALTDIVSQ----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--- 172 (297)
T ss_pred CCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhcccccc---
Confidence 999987632 35889999999999999999999999 99999999999999999999999999876533211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
......|+..|+|||++.+..++.++|||||||++|+|++|++||................ .+.... +...+.
T Consensus 173 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~ 245 (297)
T cd06659 173 ---KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSP---PPKLKN-AHKISP 245 (297)
T ss_pred ---cccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccC---CCCccc-cCCCCH
Confidence 1234578999999999998899999999999999999999999997554433222111100 011111 112234
Q ss_pred HHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 632 SIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
.+.+++.+||+.+|.+||++.+++.|+|+.-...
T Consensus 246 ~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~ 279 (297)
T cd06659 246 VLRDFLERMLTREPQERATAQELLDHPFLLQTGL 279 (297)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhhChhhccCCC
Confidence 5899999999999999999999999999875444
No 195
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.1e-36 Score=317.40 Aligned_cols=248 Identities=25% Similarity=0.387 Sum_probs=196.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.+|...++||+|+||.||++... +..+++|.+..........+.+|+++++.++||||+++++++.+ ..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45788899999999999999742 34589998776544445679999999999999999999999854 4589
Q ss_pred EEeecCCCChhhHhcccCC------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 465 VYEYMENGSLEDRLFQKDN------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
+|||+++|+|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999865421 135889999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHH
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAI 609 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i 609 (701)
||+|||+++.+..... ........+++.|+|||++.+..++.++|||||||++|+|++ |++||....... ..+
T Consensus 162 kL~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~ 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDY----YRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI 237 (280)
T ss_pred EECCCCceeEcCCCce----eecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH
Confidence 9999999976532211 011233445788999999999999999999999999999998 899986543322 222
Q ss_pred HcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 610 RNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 610 ~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+... ..+...+..+.+++.+||+.+|.+||++.+|+.
T Consensus 238 ~~~~~~--------~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 238 TQGREL--------ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred HcCccC--------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 222111 112233456899999999999999999999973
No 196
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=8.6e-37 Score=320.28 Aligned_cols=255 Identities=25% Similarity=0.364 Sum_probs=198.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|.+.+.||+|+||.||+|.+. +..||+|++...... ..+.+.+|+++++.++||||++++++|.+ ..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46899999999999999999984 566999987654332 24568899999999999999999999854 4489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++++|..+... ...+++..+..++.||+.||.|||+.+ |+||||+|+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 154 (286)
T cd07846 81 FVDHTVLDDLEKY---PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 154 (286)
T ss_pred cCCccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc
Confidence 9999988876532 234899999999999999999999999 9999999999999999999999999998764322
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cccc-------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GTFS------- 615 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~~~------- 615 (701)
. ......++..|+|||++.+ ..++.++|||||||++|+|++|++||............ +.+.
T Consensus 155 ~------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (286)
T cd07846 155 E------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF 228 (286)
T ss_pred c------ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence 1 1234568899999998765 45788999999999999999999999765543221110 0000
Q ss_pred -------cccCccCCC------CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 616 -------ELLDPTVTG------WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 616 -------~~ld~~~~~------~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
....+.... .....+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence 000011000 011234568999999999999999999999999874
No 197
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-39 Score=319.06 Aligned_cols=249 Identities=26% Similarity=0.374 Sum_probs=211.0
Q ss_pred ceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
|.++++||+|+||.||++.++. .-+|||.+..+ .+..++.+|+.||.+++.|++|++||.|.. ..++|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 7888999999999999999854 45899987544 678899999999999999999999998744 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+..|.+..+ ..+|++..+..++...+.||.|||... -||||||..||||+.+|+.||+|||.|..+..
T Consensus 113 GSiSDI~R~R--~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTD------ 181 (502)
T KOG0574|consen 113 GSISDIMRAR--RKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTD------ 181 (502)
T ss_pred CcHHHHHHHh--cCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhh------
Confidence 9999988543 357999999999999999999999998 89999999999999999999999999976632
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
+--+..+..||+.|||||++..-.|+.++||||||+...||.-|+||+..-+..+.++--.+- -.|.. .-|...+.
T Consensus 182 TMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~---PPPTF-~KPE~WS~ 257 (502)
T KOG0574|consen 182 TMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTK---PPPTF-KKPEEWSS 257 (502)
T ss_pred hHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCC---CCCCC-CChHhhhh
Confidence 223457789999999999999999999999999999999999999999877765443322111 11111 12445566
Q ss_pred HHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 632 SIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.+.+++..||-.+|++|-++.+++.|.|.+
T Consensus 258 ~F~DFi~~CLiK~PE~R~TA~~L~~H~Fik 287 (502)
T KOG0574|consen 258 EFNDFIRSCLIKKPEERKTALRLCEHTFIK 287 (502)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhhc
Confidence 799999999999999999999999999876
No 198
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=2.1e-36 Score=317.18 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=196.9
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|+..+.||.|+||.||+|+. .++.|+||.+...... ....+.+|++++++++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 588999999999999999998 4567999988754322 23568899999999999999999999854 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. ++|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++..+.....
T Consensus 81 ~~-~~l~~~~~~~~-~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASP-LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 68888775433 346899999999999999999999999 99999999999999999999999999886533211
Q ss_pred cccccccccccccCCCccCcccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH---c-Cc----------
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGM-LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---N-GT---------- 613 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---~-~~---------- 613 (701)
......+++.|+|||++.+.. ++.++|||||||++|+|+||++||........... . +.
T Consensus 156 ------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07860 156 ------TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 229 (284)
T ss_pred ------ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence 123345788999999876544 68899999999999999999999976554322211 0 00
Q ss_pred --------cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 --------FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 --------~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+..................+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF 284 (284)
T ss_pred HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence 00000000000011123457899999999999999999999999885
No 199
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.8e-36 Score=311.55 Aligned_cols=252 Identities=21% Similarity=0.344 Sum_probs=200.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-----ChHHHHHHHHHHHhCCCCcEEEEeceecC----CC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-----GPRQFKQEVEILGSMRHTNMVILLGACPE----YG 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 462 (701)
.+|.+.+.||+|+||.||+|.+. +..|+||.+...... ....+.+|+.++..++||||+++++++.+ ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 47899999999999999999984 566999988643211 12457889999999999999999998854 23
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+++|+|.+++... ..+++.....++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY---GALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCccccc
Confidence 6899999999999988543 34788888999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
+..... .........|+..|+|||.+.+..++.++|||||||++|+|++|++||............ . ..+..
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-~----~~~~~ 227 (265)
T cd06652 156 LQTICL---SGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKI-A----TQPTN 227 (265)
T ss_pred cccccc---cccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHH-h----cCCCC
Confidence 532110 011123456899999999998888999999999999999999999999765443332221 1 11112
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...|......+.+++.+|+ .+|.+||++.+|+.|+|.
T Consensus 228 ~~~~~~~~~~~~~~i~~~l-~~p~~Rp~~~~il~~~~~ 264 (265)
T cd06652 228 PVLPPHVSDHCRDFLKRIF-VEAKLRPSADELLRHTFV 264 (265)
T ss_pred CCCchhhCHHHHHHHHHHh-cChhhCCCHHHHhcCccc
Confidence 2334455566889999999 499999999999999885
No 200
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.4e-36 Score=313.93 Aligned_cols=255 Identities=28% Similarity=0.358 Sum_probs=202.4
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC----CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE----YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~ 466 (701)
++|...+.||.|+||.||+|.+ .++.+|+|.+..... .....+.+|+++++.++||||++++++|.+ ..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 4689999999999999999998 456699999876543 234568999999999999999999998843 348999
Q ss_pred eecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+++++|.+++... .....+++.....++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..+..
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999887542 23456888999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch-------HHHHHHHcCcccccc
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH-------QVEQAIRNGTFSELL 618 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~-------~~~~~i~~~~~~~~l 618 (701)
.. .....++..|++||.+.+..++.++|||||||++|+|++|+.||.... .....+.......+.
T Consensus 158 ~~--------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd06621 158 SL--------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELK 229 (287)
T ss_pred cc--------cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhc
Confidence 21 123457889999999999999999999999999999999999997551 111222211111111
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
+..... ...+..+.+++.+||..+|.+||++.+++.|+|++
T Consensus 230 ~~~~~~--~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~ 270 (287)
T cd06621 230 DEPGNG--IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIK 270 (287)
T ss_pred cCCCCC--CchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccc
Confidence 110000 12234689999999999999999999999999984
No 201
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.8e-36 Score=317.75 Aligned_cols=251 Identities=25% Similarity=0.423 Sum_probs=196.9
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE-- 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 460 (701)
...++|.+.+.||+|+||.||+|... ...||+|.+...... ....+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34678999999999999999999763 235999987654322 22357889999999999999999998844
Q ss_pred CCceEEeecCCCChhhHhcccC-------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEE
Q 005343 461 YGCLVYEYMENGSLEDRLFQKD-------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSK 533 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~K 533 (701)
..++||||+++|+|.+++.... ..+.+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 4589999999999999996532 1345677888999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHH
Q 005343 534 ISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIR 610 (701)
Q Consensus 534 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~ 610 (701)
|+|||+++.+..... ........++..|+|||.+.++.++.++|||||||++|||++ |.+||..... ....+.
T Consensus 160 L~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~ 235 (288)
T cd05061 160 IGDFGMTRDIYETDY----YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM 235 (288)
T ss_pred ECcCCcccccccccc----ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 999999986533211 111123345778999999999999999999999999999998 7889865442 222222
Q ss_pred cCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 611 NGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 611 ~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+... ..+...+..+.+++.+||+.+|++||++.+++.
T Consensus 236 ~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 273 (288)
T cd05061 236 DGGYL--------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVN 273 (288)
T ss_pred cCCCC--------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 22211 122233456999999999999999999999973
No 202
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-37 Score=322.45 Aligned_cols=253 Identities=24% Similarity=0.383 Sum_probs=216.6
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
.+-|.+.+.||+|.|..|-+|++ .+..||||++.+...+. ..++.+|+..|+.++|||||.||.+... ..|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 45688889999999999999987 67779999998766443 4568999999999999999999999754 459999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE-cCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL-DQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl-~~~~~~KL~DFGla~~~~~ 545 (701)
|+-++|+|.|++.++.. .+.+....+++.||+.|+.|+|+.. +|||||||+||.+ ..-|.+||+|||++..+.+
T Consensus 97 ELGD~GDl~DyImKHe~--Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P 171 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEE--GLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP 171 (864)
T ss_pred EecCCchHHHHHHhhhc--cccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence 99999999999988764 4889999999999999999999999 9999999999977 4679999999999987765
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCC-chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLG-VKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
+. +.++.||++.|-|||++.+..|+ +.+||||||||||-|++|++||...++-+. +.-++|-. ..
T Consensus 172 G~-------kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET------LTmImDCK-Yt 237 (864)
T KOG4717|consen 172 GK-------KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET------LTMIMDCK-YT 237 (864)
T ss_pred cc-------hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh------hhhhhccc-cc
Confidence 43 46788999999999999999885 689999999999999999999986655332 22233332 24
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.|.....+..+||..||..+|++|.++.+|+.+.|.+--|
T Consensus 238 vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D 277 (864)
T KOG4717|consen 238 VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGD 277 (864)
T ss_pred CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCC
Confidence 5777788899999999999999999999999999998644
No 203
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=6.3e-36 Score=310.54 Aligned_cols=247 Identities=25% Similarity=0.382 Sum_probs=197.7
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|+. .++.||||.+....... ...+.+|+.+++.++||||+++++++.+ ..++||
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 5799999999999999999997 56779999876533222 3458899999999999999999998743 458999
Q ss_pred eecCCCChhhHhcccC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQKD-NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+++|+|.+++.... ....++...+..++.|++.||.|||+++ ++|+||||+|||++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998875432 2345788999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch----HHHHHHHcCccccccCcc
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH----QVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~----~~~~~i~~~~~~~~ld~~ 621 (701)
.. .......|++.|+|||.+.+..++.++|+||||+++|+|++|+.||.... .....+..+.+ +.
T Consensus 159 ~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~~ 227 (267)
T cd08228 159 KT------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDY-----PP 227 (267)
T ss_pred hh------HHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCC-----CC
Confidence 21 11234568899999999988889999999999999999999999985432 12222222221 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
. .+...+..+.+++.+||..+|.+||++.+|+.
T Consensus 228 ~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~ 260 (267)
T cd08228 228 L--PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ 260 (267)
T ss_pred C--ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence 1 11234456899999999999999999999973
No 204
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.2e-36 Score=321.85 Aligned_cols=251 Identities=23% Similarity=0.325 Sum_probs=201.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecC
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYME 470 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~ 470 (701)
.|.....||+|+||.||++.. .+..||||.+..........+.+|+.+++.++||||+++++.+. +..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 455557799999999999987 45669999987655445567899999999999999999999874 45589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..+.....
T Consensus 103 ~~~L~~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~-- 173 (292)
T cd06658 103 GGALTDIVTH----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP-- 173 (292)
T ss_pred CCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--
Confidence 9999987732 24789999999999999999999999 99999999999999999999999999876532211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
......|+..|+|||++....++.++|||||||++|||++|+.||............ .....+.... .....
T Consensus 174 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~ 245 (292)
T cd06658 174 ----KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI---RDNLPPRVKD-SHKVS 245 (292)
T ss_pred ----cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhcCCCcccc-ccccC
Confidence 123456899999999998888999999999999999999999999765433221110 0011111111 11234
Q ss_pred HHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+.+++.+||..+|.+||++.+++.|+|++.
T Consensus 246 ~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~ 277 (292)
T cd06658 246 SVLRGFLDLMLVREPSQRATAQELLQHPFLKL 277 (292)
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhhChhhhc
Confidence 46889999999999999999999999999986
No 205
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=3.6e-36 Score=318.16 Aligned_cols=255 Identities=24% Similarity=0.375 Sum_probs=207.0
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
.++|.+.+.||.|+||.||+|.. .+..|++|.+..........+.+|+.+++.++||||+++++.|. +..++|+||
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 36799999999999999999987 45679999987655455567899999999999999999999984 455899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++.+ ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 98 LAGGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCCcHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 999999998843 24788899999999999999999999 99999999999999999999999999876543211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
......|++.|++||++....++.++|||||||++|+|++|++||...+........+... .+... .+..
T Consensus 171 ------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~---~~~~~-~~~~ 240 (293)
T cd06647 171 ------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG---TPELQ-NPEK 240 (293)
T ss_pred ------ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCC---CCCCC-Cccc
Confidence 1234568899999999988889999999999999999999999997665433222111100 01111 1223
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
.+..+.+++.+||..+|.+||++.+++.|+|++...
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 345689999999999999999999999999998643
No 206
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4.3e-36 Score=309.83 Aligned_cols=244 Identities=24% Similarity=0.368 Sum_probs=198.7
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC-CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI-SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
+|.+.+.||+|+||.||++.+. +..|++|.+.... ....+.+.+|+.+++.++||||+++++.+.+ ..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4888999999999999999984 5569999886543 2334568899999999999999999998854 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++... ....+++.....++.|++.||.|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~l~~~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 81 DGGDLMQKIKLQ-RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred CCCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 999999887543 3345789999999999999999999999 9999999999999999999999999997653221
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......|++.|+|||++.+..++.++|+||||+++|+|++|++||...+... ..+..+.+.. .+.
T Consensus 155 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~ 222 (255)
T cd08219 155 ----AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP--------LPS 222 (255)
T ss_pred ----cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC--------CCc
Confidence 11234578999999999999899999999999999999999999997655322 2223333221 122
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||+.+|.+||++.+++.
T Consensus 223 ~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 251 (255)
T cd08219 223 HYSYELRSLIKQMFKRNPRSRPSATTILS 251 (255)
T ss_pred ccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence 33445899999999999999999999974
No 207
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=3.1e-36 Score=315.83 Aligned_cols=255 Identities=26% Similarity=0.355 Sum_probs=200.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||.|+||.||+|.+ .++.|++|++..... .....+.+|+.++++++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 488999999999999999998 466799999876542 234678999999999999999999999854 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+ +++|.+++.... .++++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++........
T Consensus 81 ~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (286)
T cd07832 81 M-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEEP 154 (286)
T ss_pred c-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC
Confidence 9 999999885433 56899999999999999999999999 99999999999999999999999999987643211
Q ss_pred cccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-Cc--------cc
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN-GT--------FS 615 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~-~~--------~~ 615 (701)
.......|+..|+|||++.+. .++.++|||||||++|+|+||.+||......... +.. +. +.
T Consensus 155 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 155 -----RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred -----CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhcc
Confidence 112345789999999987654 4689999999999999999999998765432211 110 00 00
Q ss_pred c------ccCccCC-----CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 616 E------LLDPTVT-----GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 616 ~------~ld~~~~-----~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+ +..+... ....+....+.+++.+||..+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0 0000000 0011234678999999999999999999999999886
No 208
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-36 Score=329.25 Aligned_cols=249 Identities=20% Similarity=0.294 Sum_probs=189.9
Q ss_pred cCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
.+|.+.+.||+|+||.||+|...+ ..||+|+.... ....|+.+++.++||||++++++|.+ ..|+||||+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 139 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHY 139 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEcc
Confidence 469999999999999999999854 46999975432 23579999999999999999999844 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
.|+|.+++... ...+++..+..|+.||+.||.|||+.+ ||||||||+|||++.++.+||+|||+++.....
T Consensus 140 -~~~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 210 (357)
T PHA03209 140 -SSDLYTYLTKR--SRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--- 210 (357)
T ss_pred -CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC---
Confidence 56888887543 346899999999999999999999999 999999999999999999999999999753211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCch------------HHHHHHHc-Cccc
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITAR-PAMGLSH------------QVEQAIRN-GTFS 615 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~-~pf~~~~------------~~~~~i~~-~~~~ 615 (701)
.......||+.|+|||++.+..++.++|||||||++|||+++. ++|.... .....+.. +...
T Consensus 211 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 286 (357)
T PHA03209 211 ----PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHP 286 (357)
T ss_pred ----cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccCh
Confidence 1123457999999999999999999999999999999999854 4544321 01111110 0000
Q ss_pred cccC--c-----------------cCCCCC----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 616 ELLD--P-----------------TVTGWP----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 616 ~~ld--~-----------------~~~~~p----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
..+. + ....++ ...+..+..++.+||+.||.+|||+.++|.|+|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~ 355 (357)
T PHA03209 287 EEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA 355 (357)
T ss_pred hhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence 0000 0 000000 01123456799999999999999999999999986
No 209
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.4e-36 Score=317.12 Aligned_cols=251 Identities=28% Similarity=0.409 Sum_probs=192.8
Q ss_pred ceeeeeeeecCceeEEEEEE------CCceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC----CCce
Q 005343 396 FSISRKIGEGGYGPVYKAQL------DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE----YGCL 464 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~------~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~l 464 (701)
|.+.+.||+|+||.||++.+ .+..||+|++..... .....+.+|+++|+.++||||++++++|.. ..++
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQL 85 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEE
Confidence 48899999999999988764 345699999876532 234568899999999999999999998743 2479
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 86 v~e~~~~~~l~~~~~~----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 86 IMEYVPLGSLRDYLPK----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred EecCCCCCCHHHHHHH----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 9999999999998843 24899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHcC-------cccc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-VEQAIRNG-------TFSE 616 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~-~~~~i~~~-------~~~~ 616 (701)
..... ........++..|+|||++....++.++|||||||++|+|+||..|+..... ....+... .+..
T Consensus 159 ~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (283)
T cd05080 159 EGHEY---YRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIE 235 (283)
T ss_pred Ccchh---hccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhh
Confidence 32110 0011223456779999999888899999999999999999999988864321 11111100 0000
Q ss_pred ccCcc-CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 617 LLDPT-VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 617 ~ld~~-~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.++.. ....+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~ 276 (283)
T cd05080 236 LLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP 276 (283)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11110 01123334567999999999999999999999973
No 210
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3e-36 Score=310.95 Aligned_cols=248 Identities=26% Similarity=0.392 Sum_probs=201.6
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|++.+.||+|+||.||++.. .+..|++|.+..... .....+.+|+.++++++||||+++++.+.+ ..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 488999999999999999988 456799998865422 234568999999999999999999999854 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+.+++|.+.+.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+|||++.++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~- 155 (256)
T cd08218 81 CEGGDLYKKINAQR-GVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV- 155 (256)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch-
Confidence 99999999885432 345789999999999999999999999 9999999999999999999999999997653211
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~~~~~~~~ld~~~~~~p 626 (701)
.......|++.|+|||++.+..++.++|+|||||++|+|+||+.||......... +..+.. ...+
T Consensus 156 -----~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~ 222 (256)
T cd08218 156 -----ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY--------PPVS 222 (256)
T ss_pred -----hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC--------CCCc
Confidence 1123346888999999999888999999999999999999999999755432221 122221 1122
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...+..+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 223 SHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred ccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 3345568999999999999999999999999874
No 211
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=5.5e-36 Score=308.99 Aligned_cols=247 Identities=22% Similarity=0.347 Sum_probs=202.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey 468 (701)
+|+..+.||.|+||.||.+.. ++..+++|.+.... ......+.+|++++++++||||+++++++.+. .+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 588999999999999998887 45669999876543 23345688999999999999999999998554 3789999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++|+|.+.+.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 99999999886543 356899999999999999999999999 99999999999999999999999999987643221
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p 626 (701)
......|++.|+|||++.+..++.++||||||+++|+|++|..||......+. .+..+.+.. .+
T Consensus 157 ------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~--------~~ 222 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP--------VV 222 (256)
T ss_pred ------cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC--------Cc
Confidence 12345789999999999888899999999999999999999999976543222 223333221 12
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
...+..+.+++.+||..+|.+||++.+++.|.|
T Consensus 223 ~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 223 SVYSSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 233456899999999999999999999998865
No 212
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.1e-36 Score=316.99 Aligned_cols=255 Identities=29% Similarity=0.438 Sum_probs=197.5
Q ss_pred hcCceeeeeeeecCceeEEEEEECC------------------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH------------------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVI 453 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~------------------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~ 453 (701)
..+|++.+.||+|+||.||+|.+.. ..||+|.+...... ....+.+|++++..++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568999999999999999998743 34899998766433 3456889999999999999999
Q ss_pred EeceecC--CCceEEeecCCCChhhHhcccC--------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 005343 454 LLGACPE--YGCLVYEYMENGSLEDRLFQKD--------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPAN 523 (701)
Q Consensus 454 l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~N 523 (701)
++++|.. ..++||||+++++|.+++.... ....+++..++.++.|++.||.|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 9999854 4589999999999999986543 1236899999999999999999999999 9999999999
Q ss_pred eeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 005343 524 ILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT--ARPAMGL 601 (701)
Q Consensus 524 ILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt--G~~pf~~ 601 (701)
||++.++.+||+|||+++.+..... ........+++.|+|||++..+.++.++|||||||++|+|++ |.+||..
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDY----YRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred eeecCCCceEEccccceeecccCcc----eeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999976532211 111234456788999999988899999999999999999998 6788865
Q ss_pred chHHHH--HHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 602 SHQVEQ--AIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 602 ~~~~~~--~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
...... ..... +...........+...+..+.+++.+||+.+|.+||++.+|+
T Consensus 237 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~ 291 (296)
T cd05051 237 LTDQQVIENAGHF-FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIH 291 (296)
T ss_pred cChHHHHHHHHhc-cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHH
Confidence 432211 11111 000000111112233345799999999999999999999996
No 213
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=2.8e-36 Score=318.76 Aligned_cols=256 Identities=25% Similarity=0.319 Sum_probs=199.6
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-----ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-----GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
+|.+.+.||+|+||.||+|.+. ++.|+||.+...... ....+..|+++++.++||||+++++++.+ ..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999984 567999998765433 22346789999999999999999999865 44899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+ +|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+|+||+|+|||++.++.+||+|||++..+..
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 999999885432 36899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-C--------
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN-G-------- 612 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~-~-------- 612 (701)
.. .......+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||......... ... +
T Consensus 155 ~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (298)
T cd07841 155 PN------RKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228 (298)
T ss_pred CC------ccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence 21 11233467889999998754 45789999999999999999999988655432211 110 0
Q ss_pred ---ccccccC------ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 613 ---TFSELLD------PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 613 ---~~~~~ld------~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
....... ..........+..+.+++.+||..+|++||++.+++.|+|++=
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 229 GVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred hcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence 0000000 0000011223456899999999999999999999999999873
No 214
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.8e-36 Score=309.49 Aligned_cols=252 Identities=25% Similarity=0.361 Sum_probs=206.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|.+.+.||+|+||.||+|... +..|++|++..... .....+.+|+.++..++|||++++++++.. ..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46889999999999999999985 56699999877654 335679999999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++++|.+++... .++++..+..++.|++.||.|||+ .+ ++||||+|+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~ 154 (264)
T cd06623 81 MDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENTL 154 (264)
T ss_pred cCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccCC
Confidence 9999999998543 568999999999999999999999 99 9999999999999999999999999998764322
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
. ......++..|+|||.+.+..++.++|+||||+++|+|+||++||.... .....+..-. ......+
T Consensus 155 ~------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~~ 223 (264)
T cd06623 155 D------QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-----DGPPPSL 223 (264)
T ss_pred C------cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-----cCCCCCC
Confidence 1 1124568899999999999999999999999999999999999997653 2222221111 1111122
Q ss_pred CHH-HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 626 PVE-AALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 626 p~~-~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.. .+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~ 261 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKK 261 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHh
Confidence 223 4557999999999999999999999999999864
No 215
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.3e-36 Score=318.68 Aligned_cols=252 Identities=25% Similarity=0.389 Sum_probs=200.0
Q ss_pred HhhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecCC
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPEY 461 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~ 461 (701)
...++|.+.+.||+|+||.||++.+.+ ..+|+|.+..... .....+.+|++++..+ +||||++++++|...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345679999999999999999998742 3599999876432 2234588999999999 899999999998544
Q ss_pred --CceEEeecCCCChhhHhccc-------------CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE
Q 005343 462 --GCLVYEYMENGSLEDRLFQK-------------DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL 526 (701)
Q Consensus 462 --~~lV~Ey~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl 526 (701)
.+++|||+++|+|.+++... .....+++..+..++.|++.||.|||+.+ |+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 48999999999999998543 22456899999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH-
Q 005343 527 DQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ- 604 (701)
Q Consensus 527 ~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~- 604 (701)
+.++.+||+|||+++.+..... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~ 241 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDY----YRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE 241 (293)
T ss_pred cCCCeEEeCccccccccccccc----eeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH
Confidence 9999999999999987643211 011122345678999999988899999999999999999998 9999865432
Q ss_pred -HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 605 -VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 605 -~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
....+..+.. ...+...+..+.+|+.+||..+|.+||++.+++.+
T Consensus 242 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~ 287 (293)
T cd05053 242 ELFKLLKEGYR--------MEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED 287 (293)
T ss_pred HHHHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence 2233332221 12233344568999999999999999999999854
No 216
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=2.4e-36 Score=319.38 Aligned_cols=254 Identities=27% Similarity=0.455 Sum_probs=193.8
Q ss_pred cCceeeeeeeecCceeEEEEEECC--------------c--eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--------------T--SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLG 456 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--------------~--~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g 456 (701)
++|++.+.||+|+||.||++...+ + .||+|.+...... ....|.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 568999999999999999997632 1 3899998765332 2346899999999999999999999
Q ss_pred eec--CCCceEEeecCCCChhhHhcccC---------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 005343 457 ACP--EYGCLVYEYMENGSLEDRLFQKD---------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANIL 525 (701)
Q Consensus 457 ~~~--~~~~lV~Ey~~~gsL~~~l~~~~---------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NIL 525 (701)
++. ...++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 984 34589999999999999885432 1234788999999999999999999999 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCch
Q 005343 526 LDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT--ARPAMGLSH 603 (701)
Q Consensus 526 l~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt--G~~pf~~~~ 603 (701)
++.++.+||+|||++..+..... ........++..|+|||++..+.++.++|||||||++|+|++ |..||....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~ 237 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDY----YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS 237 (295)
T ss_pred EcCCCcEEecccccccccccCcc----eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC
Confidence 99999999999999976533211 111233456788999999998999999999999999999998 567886543
Q ss_pred HHHHHHHc-Cc-cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 604 QVEQAIRN-GT-FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 604 ~~~~~i~~-~~-~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
... .+.. .. +...........+...+..+.+|+.+||+.+|.+||++.+|+
T Consensus 238 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~ 290 (295)
T cd05097 238 DEQ-VIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIH 290 (295)
T ss_pred hHH-HHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 211 1110 00 000000011111222345699999999999999999999996
No 217
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=6.4e-36 Score=310.93 Aligned_cols=234 Identities=25% Similarity=0.414 Sum_probs=184.0
Q ss_pred eeeeecCceeEEEEEECC--------------ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCc
Q 005343 400 RKIGEGGYGPVYKAQLDH--------------TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGC 463 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--------------~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 463 (701)
+.||+|+||.||+|.... ..|++|++..........|.+|+.++..++||||+++++++.+ ..+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2488898876554445578899999999999999999999844 458
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc-------EEEEe
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV-------SKISD 536 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~-------~KL~D 536 (701)
+||||+++|+|..++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +|++|
T Consensus 81 lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK--SDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred EEEecccCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 999999999998877543 245899999999999999999999999 999999999999987654 89999
Q ss_pred eccccccCCCCCcccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHH-hCCCCCCCchHHHHH-HHcCc
Q 005343 537 VGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLI-TARPAMGLSHQVEQA-IRNGT 613 (701)
Q Consensus 537 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~ell-tG~~pf~~~~~~~~~-i~~~~ 613 (701)
||++..+.. .....++..|+|||++. +..++.++|||||||++|+|+ +|..||......+.. +..+.
T Consensus 156 ~g~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~ 225 (262)
T cd05077 156 PGIPITVLS----------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERFYEGQ 225 (262)
T ss_pred CCCCccccC----------cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHHHhcC
Confidence 999865421 12346788999999876 466899999999999999998 588888654322211 11111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
+. . . ......+.+|+.+||+.+|.+||++.+|+.+
T Consensus 226 ~~-~----~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 226 CM-L----V----TPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred cc-C----C----CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 11 1 1 1112458999999999999999999999753
No 218
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.4e-36 Score=317.13 Aligned_cols=246 Identities=26% Similarity=0.411 Sum_probs=192.9
Q ss_pred cCceeeeeeeecCceeEEEEEECCc----eEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecCC--CceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT----SVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~----~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~~lV 465 (701)
++|.+.+.||+|+||.||+|..... .+++|.++.... .....+.+|+.++.++ +||||+++++++.+. .++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 5688999999999999999987432 368888764322 2345689999999999 799999999998543 4899
Q ss_pred EeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 466 YEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
|||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 99999999999985432 1235889999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHH
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAI 609 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i 609 (701)
||+|||++...... ........+..|+|||++....++.++|||||||++|+|+| |.+||...... ...+
T Consensus 159 kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~ 231 (297)
T cd05089 159 KIADFGLSRGEEVY-------VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKL 231 (297)
T ss_pred EECCcCCCccccce-------eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 99999998643211 01112233567999999988899999999999999999998 99999654322 1222
Q ss_pred HcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 610 RNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 610 ~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
..+.. ...+...+..+.+++.+||..+|.+||++.+++..
T Consensus 232 ~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 271 (297)
T cd05089 232 PQGYR--------MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ 271 (297)
T ss_pred hcCCC--------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 22211 11222344568999999999999999999999755
No 219
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.5e-36 Score=307.82 Aligned_cols=243 Identities=33% Similarity=0.499 Sum_probs=199.1
Q ss_pred eeeeecCceeEEEEEEC-----CceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLD-----HTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~-----~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|... +..|++|++....... ...+.+|++++..++|||++++++++.+ ..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 46999999999999985 5679999998765443 5678999999999999999999999855 44899999999
Q ss_pred CChhhHhcccCC------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 472 GSLEDRLFQKDN------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 472 gsL~~~l~~~~~------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+..
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 999999865421 367899999999999999999999999 99999999999999999999999999987654
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
... ........+++.|+|||.+....++.++|||||||++|+|++ |.+||..... ....+..+. .
T Consensus 158 ~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--------~ 225 (262)
T cd00192 158 DDY----YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGY--------R 225 (262)
T ss_pred ccc----cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--------C
Confidence 321 112244567889999999988899999999999999999999 6999976543 222222221 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
...+...+..+.+++.+||..+|.+||++.+++.+
T Consensus 226 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 226 LPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred CCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 12233445679999999999999999999999853
No 220
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=4.9e-36 Score=310.03 Aligned_cols=239 Identities=27% Similarity=0.415 Sum_probs=191.6
Q ss_pred eeeeecCceeEEEEEECC-----ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~g 472 (701)
++||+|+||.||+|.+.. ..||+|.+...... ....+.+|+.+++.+.||||+++++++.. ..++||||+++|
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLG 80 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCC
Confidence 469999999999998722 45999998766543 34568999999999999999999998843 458999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|.+++.... .+++..+..++.|++.||.|||..+ ++||||||+|||++.++.+||+|||+++.+......
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~--- 151 (257)
T cd05060 81 PLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY--- 151 (257)
T ss_pred cHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCcc---
Confidence 9999985433 6899999999999999999999999 999999999999999999999999999876432211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
........++..|+|||.+....++.++|||||||++|+|++ |++||..... +...+..+.. ...|...
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~ 223 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGER--------LPRPEEC 223 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCc--------CCCCCCC
Confidence 001112234568999999998899999999999999999998 9999975443 2233333221 1122334
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
+..+.+++.+||..+|.+||++.+++
T Consensus 224 ~~~l~~li~~cl~~~p~~Rp~~~~l~ 249 (257)
T cd05060 224 PQEIYSIMLSCWKYRPEDRPTFSELE 249 (257)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHH
Confidence 45689999999999999999999987
No 221
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=2.8e-36 Score=313.49 Aligned_cols=253 Identities=27% Similarity=0.385 Sum_probs=202.1
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecC--------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPE-------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-------- 460 (701)
.+++|.+.+.||.|+||.||+|... +..+++|++.... .....+.+|+.+++++ .||||++++++|.+
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 5688999999999999999999984 4569999987654 2346789999999999 79999999999833
Q ss_pred CCceEEeecCCCChhhHhcccC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKD-NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++||||+++++|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||+
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~~ 159 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFGV 159 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCcc
Confidence 2479999999999999885432 2456899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cC
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NG 612 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~ 612 (701)
+....... .......|+..|+|||++.. ..++.++|||||||+||+|+||++||........... .+
T Consensus 160 ~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 233 (275)
T cd06608 160 SAQLDSTL------GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN 233 (275)
T ss_pred ceecccch------hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc
Confidence 87653321 11234568999999998753 3477899999999999999999999975443222221 11
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 ~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.. +.. ..+...+..+.+++.+||..+|.+||++.+++.|+|.
T Consensus 234 ~~-----~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~ 275 (275)
T cd06608 234 PP-----PTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI 275 (275)
T ss_pred CC-----CCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence 11 111 1122344568999999999999999999999999873
No 222
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.5e-36 Score=314.28 Aligned_cols=249 Identities=22% Similarity=0.332 Sum_probs=198.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC---C
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE---Y 461 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~ 461 (701)
..++|.+.+.||+|+||.||+|.+.. ..|++|++...... ....+.+|+.+++.++||||+++++++.+ .
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35679999999999999999999844 56999988654322 23558899999999999999999998743 4
Q ss_pred CceEEeecCCCChhhHhcccCCC-----CCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEe
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNS-----PPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISD 536 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~D 536 (701)
.+++++|+.+|+|.+++...... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 58999999999999998654322 56899999999999999999999999 99999999999999999999999
Q ss_pred eccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCc
Q 005343 537 VGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGT 613 (701)
Q Consensus 537 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~ 613 (701)
||+++.+.+.... .......++..|+|||++....++.++|||||||++|+|++ |++||...... ...+..+.
T Consensus 161 ~g~~~~~~~~~~~----~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~ 236 (280)
T cd05043 161 NALSRDLFPMDYH----CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY 236 (280)
T ss_pred CCCcccccCCceE----EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC
Confidence 9999866433211 11123346778999999988889999999999999999999 99999755432 22222221
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
. ...+..++..+.+++.+||..+|++||++.+++
T Consensus 237 ~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~ 270 (280)
T cd05043 237 R--------LAQPINCPDELFAVMACCWALDPEERPSFSQLV 270 (280)
T ss_pred C--------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence 1 011223345689999999999999999999997
No 223
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.3e-36 Score=308.78 Aligned_cols=248 Identities=27% Similarity=0.410 Sum_probs=202.4
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC----CCceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE----YGCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~ 466 (701)
+|.+.+.||.|+||.||++.+ .+..|++|++...... ....+..|+.+++.++||||+++++++.. ..+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 478899999999999999988 4456999988754322 23458889999999999999999987632 237999
Q ss_pred eecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHh-----hcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 467 EYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLH-----QNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH-----~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
||+++++|.+++... ....++++..+..++.||+.||.||| +.+ |+|+||+|+||+++.++.+||+|||++
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~---i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNT---VLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCc---ceecCCCHHHEEEecCCCEEEeccccc
Confidence 999999999988653 23457899999999999999999999 667 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCcccccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELL 618 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~l 618 (701)
..+..... ......|++.|++||.+.+..++.++|+||||+++|+|++|+.||...+. ....+..+.+
T Consensus 158 ~~~~~~~~------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---- 227 (265)
T cd08217 158 KILGHDSS------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKF---- 227 (265)
T ss_pred ccccCCcc------cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCC----
Confidence 87643211 12345789999999999988899999999999999999999999976542 2233333322
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
...+...+..+.+++.+|+..+|.+||++.+|+.|+|
T Consensus 228 ----~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 228 ----RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred ----CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 2233344567899999999999999999999999986
No 224
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.7e-36 Score=309.89 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=201.4
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-----CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-----QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
+|...+.||+|+||.||+|.. ++..|++|.+..... ...+.+.+|+.+++.++||||+++++++.+ ..++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 367778999999999999998 467799998865432 134568999999999999999999999854 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKY---GSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 9999999999988543 35889999999999999999999999 99999999999999999999999999876533
Q ss_pred CCCcccccccccccccCCCccCcccccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGM-LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.. ......|+..|++||.+.... ++.++|+|||||++|+|++|++||+...........+.... ...
T Consensus 155 ~~-------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~-----~~~ 222 (258)
T cd06632 155 FS-------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKE-----LPP 222 (258)
T ss_pred cc-------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhccc-----CCC
Confidence 21 123456889999999887766 89999999999999999999999976654444333222111 112
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.+......+.+++.+||..+|.+||++.+++.|+|
T Consensus 223 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 257 (258)
T cd06632 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPF 257 (258)
T ss_pred cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence 22334456899999999999999999999999886
No 225
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=4.9e-36 Score=315.83 Aligned_cols=256 Identities=24% Similarity=0.356 Sum_probs=195.7
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.++|.+.+.||.|+||.||+|.. .++.||||.+...... ....+.+|+++++.++||||+++++++.+ ..++|||
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFE 83 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEe
Confidence 36799999999999999999998 4567999998765432 23457789999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+. ++|.+++.... ..+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 84 ~~~-~~L~~~~~~~~--~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 84 YLD-TDLKQYMDDCG--GGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred cCC-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 997 58988875433 36889999999999999999999999 9999999999999999999999999987542211
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH----Hc-C-----c---
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI----RN-G-----T--- 613 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i----~~-~-----~--- 613 (701)
.......++..|+|||++.+ ..++.++|||||||++|+|++|++||.........+ .. + .
T Consensus 158 ------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (291)
T cd07844 158 ------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG 231 (291)
T ss_pred ------ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhh
Confidence 11123457889999998765 458999999999999999999999996554211111 10 0 0
Q ss_pred ------cccccCccCCC------CC-HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 ------FSELLDPTVTG------WP-VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 ------~~~~ld~~~~~------~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+.....+.... ++ ......+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred hhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00000000000 00 0011457899999999999999999999999885
No 226
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=5.3e-36 Score=313.96 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=199.2
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
+|++.+.||.|+||.||+|++. +..||||++...... ....+.+|+.+++.++||||++++++|.+ ..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5889999999999999999984 566999998766433 34567889999999999999999999854 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
+ |+|.+++........+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 81 D-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred C-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 7 588888765554457899999999999999999999999 99999999999999999999999999976532211
Q ss_pred ccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HHHcC-------------
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ---AIRNG------------- 612 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~---~i~~~------------- 612 (701)
......++..|++||++.+ ..++.++|||||||++|+|++|++||......+. .+...
T Consensus 156 -----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 -----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred -----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc
Confidence 1234467889999998765 4578999999999999999999999976543221 11100
Q ss_pred ------ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 ------TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 ------~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+....+.....+....+..+.+++.+|++.+|.+||++.+++.|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 000000000000111224458899999999999999999999999875
No 227
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=7.5e-36 Score=309.37 Aligned_cols=239 Identities=24% Similarity=0.369 Sum_probs=190.3
Q ss_pred eeeecCceeEEEEEEC----CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecCCCCh
Q 005343 401 KIGEGGYGPVYKAQLD----HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYMENGSL 474 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~----~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL 474 (701)
.||+|+||.||+|.+. +..||+|++...... ....+.+|+.++++++||||++++++|.. ..++||||+++|+|
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L 81 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPL 81 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCH
Confidence 3899999999999863 234999998765432 23568999999999999999999999854 45899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+...... ..
T Consensus 82 ~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~---~~ 153 (257)
T cd05115 82 NKFLSGK--KDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSY---YK 153 (257)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccc---ee
Confidence 9988543 246899999999999999999999999 999999999999999999999999999865332110 01
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
......+++.|+|||++....++.++|||||||++|+|++ |.+||..... +...+..+.. ...|..++.
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 225 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKR--------LDCPAECPP 225 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC--------CCCCCCCCH
Confidence 1122334678999999988889999999999999999996 9999965432 2233333321 122334456
Q ss_pred HHHHHHHHhhccCcCCCCChhhhh
Q 005343 632 SIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+.+++.+||..+|++||++.+|.
T Consensus 226 ~l~~li~~c~~~~~~~Rp~~~~i~ 249 (257)
T cd05115 226 EMYALMKDCWIYKWEDRPNFAKVE 249 (257)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHH
Confidence 789999999999999999999996
No 228
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=9.1e-36 Score=307.60 Aligned_cols=242 Identities=26% Similarity=0.428 Sum_probs=199.5
Q ss_pred hcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYME 470 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~ 470 (701)
.++|.+.+.||.|+||.||+|...++.|++|.+..... ....+.+|+.+++.++||||+++++++. +..++||||++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 83 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMA 83 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecC
Confidence 34688899999999999999999999999999976643 4667999999999999999999999985 34589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+++|.+++..... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~--- 156 (256)
T cd05039 84 KGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ--- 156 (256)
T ss_pred CCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc---
Confidence 9999998855432 35899999999999999999999999 9999999999999999999999999998763211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
....++..|+|||++..+.++.++||||||+++|+|++ |+.||..... ....+..+.. ...+.
T Consensus 157 ------~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~--------~~~~~ 222 (256)
T cd05039 157 ------DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR--------MEAPE 222 (256)
T ss_pred ------ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--------CCCcc
Confidence 12345678999999998899999999999999999997 9999865532 2222222211 01122
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 251 (256)
T cd05039 223 GCPPEVYKVMKDCWELDPAKRPTFKQLRE 251 (256)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence 33456899999999999999999999874
No 229
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4.3e-36 Score=319.06 Aligned_cols=249 Identities=28% Similarity=0.433 Sum_probs=193.6
Q ss_pred cCceeeeeeeecCceeEEEEEECC--ce--EEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--TS--VAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--~~--vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV 465 (701)
++|.+.+.||+|+||.||+|.+.. .. +++|.+..... .....+.+|+.++.++ +||||++++++|.+ ..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 568999999999999999999743 32 57777654322 2345688999999999 89999999999854 45899
Q ss_pred EeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 466 YEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
|||+++|+|.+++.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 99999999999986432 1235889999999999999999999999 9999999999999999999
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHH
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAI 609 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i 609 (701)
||+|||++...... .......++..|+|||++....++.++|||||||++|+|+| |.+||......+ ..+
T Consensus 164 kl~dfg~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~ 236 (303)
T cd05088 164 KIADFGLSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 236 (303)
T ss_pred EeCccccCcccchh-------hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHH
Confidence 99999998632110 01122234677999999988889999999999999999998 999986443221 112
Q ss_pred HcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 610 RNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 610 ~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..+. ....+...+..+.+++.+||+.+|.+||++.+++.....
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 237 PQGY--------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred hcCC--------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1110 011122234468999999999999999999999876433
No 230
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.8e-36 Score=314.93 Aligned_cols=247 Identities=26% Similarity=0.376 Sum_probs=194.8
Q ss_pred CceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
+|.+.+.||+|+||.||+|.... ..+++|.+...... ....+.+|+.+++.++||||+++++.|.. ..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 47788999999999999998632 34888888655422 23568899999999999999999999844 4589
Q ss_pred EEeecCCCChhhHhcccC---------------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 005343 465 VYEYMENGSLEDRLFQKD---------------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPAN 523 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~N 523 (701)
||||+.+|+|.+++.... ...++++..++.++.|++.||.|||+.+ |+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 999999999999875321 1235889999999999999999999999 9999999999
Q ss_pred eeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCc
Q 005343 524 ILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLS 602 (701)
Q Consensus 524 ILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 602 (701)
||++.++.+||+|||+++.+..... ........++..|+|||++.+..++.++||||||+++|+|+| |.+||...
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~----~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~ 233 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDS----YVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI 233 (290)
T ss_pred EEEcCCCcEEeccccccccccCccc----hhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999986533211 111233456778999999988889999999999999999999 99999754
Q ss_pred hHH--HHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 603 HQV--EQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 603 ~~~--~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
... ...+..+.. ...+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~ 281 (290)
T cd05045 234 APERLFNLLKTGYR--------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISK 281 (290)
T ss_pred CHHHHHHHHhCCCC--------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 322 222222210 1112233456899999999999999999999973
No 231
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=6.8e-36 Score=307.82 Aligned_cols=239 Identities=25% Similarity=0.393 Sum_probs=189.2
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
+.||+|+||.||+|++ .++.||+|.+...... ....+.+|+++++.++||||++++++|.. ..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 3699999999999988 5677999987654322 24568999999999999999999999844 44899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++......... .
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~----~ 151 (252)
T cd05084 81 LTFLRTE--GPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA----S 151 (252)
T ss_pred HHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCccccccccc----c
Confidence 9988543 245889999999999999999999999 999999999999999999999999998765321100 0
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
......++..|+|||++.++.++.++|||||||++|+|++ |.+||..... ....+..+.. ...+...+.
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 223 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR--------LPCPELCPD 223 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC--------CCCcccCCH
Confidence 0112233567999999999999999999999999999998 8899864332 2222222111 112333455
Q ss_pred HHHHHHHHhhccCcCCCCChhhhh
Q 005343 632 SIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+.+++.+||..+|.+||++.+++
T Consensus 224 ~~~~li~~~l~~~p~~Rps~~~~~ 247 (252)
T cd05084 224 AVYRLMERCWEYDPGQRPSFSTVH 247 (252)
T ss_pred HHHHHHHHHcCCChhhCcCHHHHH
Confidence 689999999999999999999997
No 232
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.7e-37 Score=330.47 Aligned_cols=241 Identities=24% Similarity=0.228 Sum_probs=189.4
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhC---CCCcEEEEeceecC--CCceEEeecCC
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSM---RHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l---~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
||+|+||.||+|++. +..||+|++..... .....+..|..++..+ +||||+.+++.+.+ ..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999984 56799999864321 1223456677777665 69999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 81 g~L~~~l~~~---~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---- 150 (330)
T cd05586 81 GELFWHLQKE---GRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN---- 150 (330)
T ss_pred ChHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC----
Confidence 9999888543 45889999999999999999999999 9999999999999999999999999987542211
Q ss_pred ccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
......+||+.|+|||++.+. .++.++|||||||++|+|+||+.||...... ...+..+... +.. ..
T Consensus 151 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~------~~~--~~ 220 (330)
T cd05586 151 --KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVR------FPK--NV 220 (330)
T ss_pred --CCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCC------CCC--cc
Confidence 112456799999999988754 4899999999999999999999999765432 2223333211 110 11
Q ss_pred HHHHHHHHHHHhhccCcCCCC----ChhhhhhHHHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRP----DLVSVVLPELIRL 662 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RP----t~~~vl~~~~~~l 662 (701)
.+..+.+++.+||..+|.+|| ++.+++.|+|++-
T Consensus 221 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~ 258 (330)
T cd05586 221 LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFAD 258 (330)
T ss_pred CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccC
Confidence 234578999999999999998 6899999999864
No 233
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.4e-36 Score=316.57 Aligned_cols=258 Identities=23% Similarity=0.333 Sum_probs=197.5
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCC-CCcEEEEeceecC--C-----
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMR-HTNMVILLGACPE--Y----- 461 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~----- 461 (701)
++|++.+.||+|+||.||+|.+. ++.||+|.+...... ....+.+|+.+++.+. ||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46899999999999999999984 567999987665322 2356888999999995 6999999998732 2
Q ss_pred CceEEeecCCCChhhHhcccCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeec
Q 005343 462 GCLVYEYMENGSLEDRLFQKDN--SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVG 538 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFG 538 (701)
.++||||+++ +|.+++..... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 4799999975 78888754322 356899999999999999999999999 999999999999998 8999999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GT 613 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~ 613 (701)
+++.+..... ......+++.|+|||++.+ ..++.++||||||+++|+|++|.+||...........- +.
T Consensus 157 ~~~~~~~~~~------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 230 (295)
T cd07837 157 LGRAFSIPVK------SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGT 230 (295)
T ss_pred cceecCCCcc------ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9986532211 1233467889999998755 45799999999999999999999999766544332210 00
Q ss_pred cccccCcc---------CCCC--------CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 614 FSELLDPT---------VTGW--------PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 614 ~~~~ld~~---------~~~~--------p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
......+. ...+ ....+..+.+++.+||..+|.+||++.+++.|+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence 00000000 0000 012345689999999999999999999999999863
No 234
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=6e-36 Score=314.03 Aligned_cols=255 Identities=27% Similarity=0.402 Sum_probs=193.7
Q ss_pred cCceeeeeeeecCceeEEEEEE------CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec----CCCc
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL------DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP----EYGC 463 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~------~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~----~~~~ 463 (701)
..|++.+.||+|+||.||+|.. .+..|++|.+..........+.+|+++++.++||||+++++++. ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4688899999999999999985 24569999987665444567899999999999999999999863 2347
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~ 158 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKVL 158 (284)
T ss_pred EEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCcccccc
Confidence 9999999999999885432 35889999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHcCccc-------
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-VEQAIRNGTFS------- 615 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~-~~~~i~~~~~~------- 615 (701)
....... .......++..|+|||++.+..++.++|||||||++|||++|..|+..... ....+......
T Consensus 159 ~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 159 PQDKEYY---KVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred cCCCcce---eecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 4322110 011122345569999999988999999999999999999998866543321 11111100000
Q ss_pred -cccC-ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 616 -ELLD-PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 616 -~~ld-~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+. ......+...+..+.+++.+||..+|.+||++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05081 236 IELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL 278 (284)
T ss_pred HHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 0000 0000112233456999999999999999999999974
No 235
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=1.6e-35 Score=307.02 Aligned_cols=245 Identities=25% Similarity=0.396 Sum_probs=198.6
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||+|... ++.|++|.++..... ....+.+|++++++++|+|++++++.+.+ ..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57999999999999999999984 677999988653322 24568999999999999999999998844 448999
Q ss_pred eecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+++|+|.+++... .....+++..+..++.+++.||.|||+.+ |+||||+|+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999988543 23456899999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH----HHHHHHcCccccccCcc
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ----VEQAIRNGTFSELLDPT 621 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~----~~~~i~~~~~~~~ld~~ 621 (701)
... ......|+..|+|||++.+..++.++|||||||++|+|++|+.||..... +...+..+.+.
T Consensus 159 ~~~------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------ 226 (267)
T cd08224 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYP------ 226 (267)
T ss_pred CCc------ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCC------
Confidence 211 11334688999999999888899999999999999999999999854321 11222222221
Q ss_pred CCCCCH-HHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 622 VTGWPV-EAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 622 ~~~~p~-~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
..|. ..+..+.+++.+||..+|.+||++.+|+
T Consensus 227 --~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il 259 (267)
T cd08224 227 --PLPADHYSEELRDLVSRCINPDPEKRPDISYVL 259 (267)
T ss_pred --CCChhhcCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 1222 3445689999999999999999999986
No 236
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.1e-35 Score=311.14 Aligned_cols=247 Identities=24% Similarity=0.367 Sum_probs=201.1
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
-|.+.+.||.|+||.||+|.. .+..||+|++..... .....+.+|+.++++++||||++++++|.+ ..++||||+
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 84 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeC
Confidence 377888999999999999987 456799998765432 223568899999999999999999999844 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++.. ..+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++..+....
T Consensus 85 ~~~~l~~~i~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 85 GGGSALDLLEP----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCCcHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 99999988742 35889999999999999999999999 9999999999999999999999999987664321
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCCH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......|+..|++||++.+..++.++|+|||||++|+|++|.+||........ .+..+. ....+.
T Consensus 156 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 223 (277)
T cd06641 156 ----IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN--------PPTLEG 223 (277)
T ss_pred ----hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCC--------CCCCCc
Confidence 112345688999999999988899999999999999999999999975443221 111111 111223
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+..+.+++.+||..+|..||++.+++.|+|+.-
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~ 258 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVR 258 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhh
Confidence 34456899999999999999999999999999873
No 237
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=6.1e-36 Score=308.86 Aligned_cols=243 Identities=27% Similarity=0.377 Sum_probs=194.5
Q ss_pred eeeeecCceeEEEEEECC---c--eEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQLDH---T--SVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~---~--~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~g 472 (701)
+.||+|+||.||+|.+.. + .||||.+..... ...+.+.+|+.++++++||||+++++.+.+ ..++||||+++|
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~ 80 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLG 80 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCC
Confidence 368999999999998733 2 489999987765 445679999999999999999999998855 347999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|.+.+..... ..+++.....++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.+......
T Consensus 81 ~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--- 153 (257)
T cd05040 81 SLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH--- 153 (257)
T ss_pred cHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccc---
Confidence 99999866443 56899999999999999999999999 999999999999999999999999999877432211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
........++..|+|||++.+..++.++|||||||++|+|+| |++||......+ ..+.... .....+...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 226 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-------ERLERPEAC 226 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-------CcCCCCccC
Confidence 011123567889999999999999999999999999999999 999996443222 1111100 001122233
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+..+.+++.+||..+|.+||++.+++.
T Consensus 227 ~~~~~~li~~~l~~~p~~Rps~~~~~~ 253 (257)
T cd05040 227 PQDIYNVMLQCWAHNPADRPTFAALRE 253 (257)
T ss_pred CHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence 456899999999999999999999974
No 238
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.9e-36 Score=318.18 Aligned_cols=249 Identities=25% Similarity=0.365 Sum_probs=199.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|++.+.||+|+||.||++... ++.||+|++..... .....+.+|+++++.++||||+++++.+.+ ..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46888899999999999999985 66799998865532 234678999999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++|+|.+++... .++++..+..++.+++.||.|||+ .+ ++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 85 MDCGSLDRIYKKG---GPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred CCCCCHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 9999999887442 358999999999999999999997 46 9999999999999999999999999986542211
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH----------HHHHHcCccccc
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV----------EQAIRNGTFSEL 617 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~----------~~~i~~~~~~~~ 617 (701)
.....|+..|+|||++.+..++.++|||||||++|+|+||++||...... ...+.. +
T Consensus 159 --------~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-----~ 225 (284)
T cd06620 159 --------ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ-----I 225 (284)
T ss_pred --------cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHH-----H
Confidence 12457899999999998889999999999999999999999999754321 111111 1
Q ss_pred cCccCCCCCH-HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 618 LDPTVTGWPV-EAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 618 ld~~~~~~p~-~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
........+. ..+..+.+++.+||..+|.+||++.+++.+.|+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~ 270 (284)
T cd06620 226 VQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFI 270 (284)
T ss_pred hhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 1111111111 2445689999999999999999999999987763
No 239
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.7e-36 Score=315.53 Aligned_cols=256 Identities=23% Similarity=0.355 Sum_probs=201.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|++.+.||.|+||.||+|.+. +..|++|.+..... .....+.+|+++++.++||||+++++.|.+ ..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 46899999999999999999985 45699998865432 234678999999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|++++.+..++.. ...+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEAS---PGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 9988777655422 234889999999999999999999999 9999999999999999999999999998764332
Q ss_pred CcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCc-------------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGT------------- 613 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~------------- 613 (701)
. .......++..|+|||++.+. .++.++||||||+++|+|++|++||..............
T Consensus 155 ~-----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd07833 155 A-----SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELF 229 (288)
T ss_pred c-----ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhc
Confidence 1 122345788999999998888 889999999999999999999999976654433221100
Q ss_pred -----cc--cccCccC-----CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 -----FS--ELLDPTV-----TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 -----~~--~~ld~~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+. ....... ..++...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 230 SSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred ccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence 00 0000000 01122235679999999999999999999999999874
No 240
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6.5e-36 Score=318.05 Aligned_cols=254 Identities=25% Similarity=0.396 Sum_probs=199.1
Q ss_pred hcCceeeeeeeecCceeEEEEEECC---------ceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC-
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH---------TSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~---------~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~- 460 (701)
.++|.+.+.||+|+||.||++.+.+ ..+|+|.+..... .....+..|+.++..+ +||||++++++|.+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 4679999999999999999998632 3599999876532 2345688899999999 79999999999854
Q ss_pred -CCceEEeecCCCChhhHhcccCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDN-------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL 526 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl 526 (701)
..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ ++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 44899999999999999965421 235889999999999999999999999 9999999999999
Q ss_pred cCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH-
Q 005343 527 DQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ- 604 (701)
Q Consensus 527 ~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~- 604 (701)
+.++.+||+|||+++.+..... ........+++.|+|||++.+..++.++|||||||++|+|++ |.+||.....
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~ 249 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDY----YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE 249 (307)
T ss_pred cCCCcEEECCCcccccccccch----hhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHH
Confidence 9999999999999876532110 001122234578999999988899999999999999999998 8899865442
Q ss_pred -HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 605 -VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 605 -~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+...+..+.. ...|...+..+.+++.+||..+|.+||++.+++. .+.++
T Consensus 250 ~~~~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~-~l~~~ 299 (307)
T cd05098 250 ELFKLLKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE-DLDRI 299 (307)
T ss_pred HHHHHHHcCCC--------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHH-HHHHH
Confidence 2222332221 1223334457899999999999999999999974 44443
No 241
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7e-36 Score=312.87 Aligned_cols=253 Identities=26% Similarity=0.380 Sum_probs=196.5
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHH-HHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEI-LGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~i-l~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|.+.+.||+|+||.||+|.+. +..||||.+..... .....+..|+.+ ++.++||||+++++++.. ..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46899999999999999999984 56799999876542 233456667765 566799999999999843 4589999
Q ss_pred ecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 468 YMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQN-KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 468 y~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|++ |+|.+++... .....+++..+..++.||+.||.|||++ + ++||||||+|||++.++.+||+|||++..+..
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 996 6888777542 3345789999999999999999999987 7 99999999999999999999999999986532
Q ss_pred CCCcccccccccccccCCCccCcccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHH--HHcCcccccc
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQT----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-VEQA--IRNGTFSELL 618 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDvwSlGvil~elltG~~pf~~~~~-~~~~--i~~~~~~~~l 618 (701)
.. ......|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||..... .+.. +..+..
T Consensus 157 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~---- 225 (283)
T cd06617 157 SV-------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS---- 225 (283)
T ss_pred cc-------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC----
Confidence 11 1133468899999998754 4568899999999999999999999964221 1111 111111
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+.... ...+..+.+++.+||..+|.+||++.+++.|+|++...
T Consensus 226 -~~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 226 -PQLPA--EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred -CCCCc--cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 11110 12345689999999999999999999999999998743
No 242
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=7.7e-36 Score=310.98 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=199.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--C--------hHHHHHHHHHHHhCCCCcEEEEeceecC--
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--G--------PRQFKQEVEILGSMRHTNMVILLGACPE-- 460 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~--------~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 460 (701)
+|.+.+.||.|+||.||+|.. .+..||+|.+...... . .+.+.+|+.+++.++|||++++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 477889999999999999987 4567999987643211 1 2357889999999999999999999844
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..++||||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY---GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeecccc
Confidence 458999999999999988543 46889999999999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCcccccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM--LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELL 618 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~l 618 (701)
+...... .........|+..|+|||.+.... ++.++|+||||+++|+|++|.+||............... ..
T Consensus 156 ~~~~~~~----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~ 229 (272)
T cd06629 156 KKSDDIY----DNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK--RS 229 (272)
T ss_pred ccccccc----cccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc--cc
Confidence 7653211 111223456889999999887655 889999999999999999999999765544333321111 00
Q ss_pred CccC-CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 619 DPTV-TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 619 d~~~-~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+.. .......+..+.+++.+||..+|.+||++.+++.|+|.
T Consensus 230 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~ 272 (272)
T cd06629 230 APPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI 272 (272)
T ss_pred CCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence 0111 11112334578999999999999999999999999873
No 243
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.1e-36 Score=310.68 Aligned_cols=246 Identities=23% Similarity=0.357 Sum_probs=197.2
Q ss_pred hcCceeeeeeeecCceeEEEEEECC-----ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV 465 (701)
.++|.+.+.||+|+||.||+|.+.+ ..|+||....... ...+.+.+|+.+++.++||||++++++|.+ ..++|
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv 84 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIV 84 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEE
Confidence 3468889999999999999998743 2589998876542 334568999999999999999999998854 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++....
T Consensus 85 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 85 MELAPLGELRSYLQVNK--YSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred EEcCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeeccc
Confidence 99999999999985432 35899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHH--HHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVEQ--AIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~--~i~~~~~~~~ld~~~ 622 (701)
.. .+......++..|+|||.+....++.++|||||||++|+|++ |++||........ .+..+...
T Consensus 160 ~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~------- 227 (270)
T cd05056 160 ES-----YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL------- 227 (270)
T ss_pred cc-----ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC-------
Confidence 21 111223345578999999988889999999999999999996 9999976543322 22222211
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+...+..+.+++.+|+..+|.+||++.+++.
T Consensus 228 -~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~ 260 (270)
T cd05056 228 -PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKA 260 (270)
T ss_pred -CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 112334456999999999999999999999863
No 244
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.6e-35 Score=312.10 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=196.2
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++++|.+.+.||+|+||.||+|.. .+..|++|++....... ...+.+|+.+++.++|+||+++++++.+ ..|+||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 457899999999999999999987 46679999987654332 3467899999999999999999999854 358999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+. ++|.+.+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+++.....
T Consensus 83 e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 156 (291)
T cd07870 83 EYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSIP 156 (291)
T ss_pred eccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCCC
Confidence 9995 67777664332 35778888899999999999999999 999999999999999999999999998754221
Q ss_pred CCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc-----Cc-------
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN-----GT------- 613 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~-----~~------- 613 (701)
. .......+++.|+|||++.+. .++.++|||||||++|+|+||++||.........+.+ +.
T Consensus 157 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (291)
T cd07870 157 S------QTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230 (291)
T ss_pred C------CCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhh
Confidence 1 112344678999999988654 5789999999999999999999999755433222111 00
Q ss_pred ----cccccCccCCC---------CC-HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 ----FSELLDPTVTG---------WP-VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 ----~~~~ld~~~~~---------~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+.......... |. ......+.+++.+|+..+|.+||++.+++.|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 231 GVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred hhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence 00000000000 00 0113468899999999999999999999999884
No 245
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.9e-36 Score=313.00 Aligned_cols=254 Identities=22% Similarity=0.399 Sum_probs=201.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC------ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ------GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
+|+..+.||+|+||.||+|.. .+..||+|++...... ....+.+|+.+++.++||||+++++++.+ ..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477889999999999999987 4567999998754321 13468899999999999999999999854 4489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-cEEEEeecccccc
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARLV 543 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~~ 543 (701)
||||+++++|.+++... .++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++ .+||+|||++..+
T Consensus 81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKY---GAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 99999999999988543 36889999999999999999999999 99999999999998765 6999999999876
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH---HHHHHHcCccccccCc
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ---VEQAIRNGTFSELLDP 620 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~---~~~~i~~~~~~~~ld~ 620 (701)
...... .........|+..|+|||++.+..++.++||||||+++|+|++|++||..... .......... .
T Consensus 155 ~~~~~~--~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~--- 227 (268)
T cd06630 155 AAKGTG--AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASA--T--- 227 (268)
T ss_pred cccccc--CCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhcc--C---
Confidence 433111 01112345689999999999888899999999999999999999999964331 1111111110 0
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.....|......+.+++.+||..+|.+||++.+++.|+|++
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 11233445556799999999999999999999999999863
No 246
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.4e-35 Score=315.00 Aligned_cols=275 Identities=25% Similarity=0.402 Sum_probs=207.3
Q ss_pred cCceeeeeeeecCceeEEEEEEC--Cc----eEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC-CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HT----SVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE-YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~----~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV 465 (701)
++|+..+.||+|+||.||+|.+. +. .||+|.+....... ...+.+|+.+++.++||||++++|+|.. ..+++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v 86 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLV 86 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceee
Confidence 45788899999999999999873 32 37889886553222 2368899999999999999999999844 45799
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 87 TQLMPHGCLLDYVHEHK--DNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred ehhcCCCCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999885432 35788999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCc--hHHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLS--HQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~--~~~~~~i~~~~~~~~ld~~~ 622 (701)
... ........++..|++||++.+..++.++|||||||++|||++ |..||... ......+..+... +
T Consensus 162 ~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----~-- 231 (303)
T cd05110 162 DEK----EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERL----P-- 231 (303)
T ss_pred ccc----ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCC----C--
Confidence 221 112233456788999999998999999999999999999997 88888653 2333334333211 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccccccCCCCCcccCCCCCCC
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDNIVVTPGPYNS 686 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 686 (701)
.+..++..+.+++..||..+|.+||++.+++. .+..+..-.........+.....|+|..+
T Consensus 232 --~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (303)
T cd05110 232 --QPPICTIDVYMVMVKCWMIDADSRPKFKELAA-EFSRMARDPQRYLVIQGDDRMKLPSPNDS 292 (303)
T ss_pred --CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH-HHHHHHhchhhheeeccCCcCCCCCCchh
Confidence 11223346899999999999999999999865 55554333333333333444444555433
No 247
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=9.4e-36 Score=311.15 Aligned_cols=250 Identities=24% Similarity=0.395 Sum_probs=201.2
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-CChHHHHHHHHHHHhCC---CCcEEEEeceecC--CCceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSMR---HTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~--~~~lV~ 466 (701)
.|++.+.||.|+||.||+|.+ .+..|++|.+..... .....+.+|+.+++.++ |||+++++++|.+ ..|+||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999998 456799999876532 33456889999999997 9999999998854 348999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++++|.+++.. ..+++.....++.|++.||.|||+.+ |+|+||+|+||+++.++.++|+|||++..+...
T Consensus 82 e~~~~~~L~~~~~~----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 154 (277)
T cd06917 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQN 154 (277)
T ss_pred ecCCCCcHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCCC
Confidence 99999999998743 26889999999999999999999999 999999999999999999999999999876433
Q ss_pred CCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
. .......|+..|+|||++.++ .++.++|+|||||++|+|++|.+||............. ....+.+..
T Consensus 155 ~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~---~~~~~~~~~- 224 (277)
T cd06917 155 S------SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIP---KSKPPRLED- 224 (277)
T ss_pred c------cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccc---cCCCCCCCc-
Confidence 2 112345789999999988654 46899999999999999999999997665433221111 111111111
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 225 -~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~ 260 (277)
T cd06917 225 -NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKA 260 (277)
T ss_pred -ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhc
Confidence 013456899999999999999999999999999964
No 248
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=8.2e-36 Score=307.80 Aligned_cols=240 Identities=26% Similarity=0.408 Sum_probs=196.9
Q ss_pred cCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec-CCCceEEeecCCC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP-EYGCLVYEYMENG 472 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~-~~~~lV~Ey~~~g 472 (701)
+.|.+.+.||+|+||.||+|...+..||+|.+.... ....+.+|+.+++.++|||++++++++. +..++||||+.+|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~ 83 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKG 83 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCC
Confidence 458899999999999999999988899999986542 3467899999999999999999999884 3458999999999
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++.......
T Consensus 84 ~L~~~l~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~----- 154 (254)
T cd05083 84 NLVNFLRTRG-RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV----- 154 (254)
T ss_pred CHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceeccccC-----
Confidence 9999986543 345889999999999999999999999 9999999999999999999999999987543211
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHH
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.....+..|+|||++.++.++.++|+|||||++|+|++ |++||..... ....+..+... ..+...
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~ 222 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRM--------EPPEGC 222 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCC--------CCCCcC
Confidence 12234567999999998899999999999999999998 9999965543 22333332111 112233
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+..+.+++.+||+.+|..||++.+++.
T Consensus 223 ~~~~~~li~~~l~~~p~~Rp~~~~l~~ 249 (254)
T cd05083 223 PADVYVLMTSCWETEPKKRPSFHKLRE 249 (254)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 456899999999999999999999974
No 249
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.7e-36 Score=314.30 Aligned_cols=247 Identities=26% Similarity=0.346 Sum_probs=204.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||+|+||.||++.+. +..||+|++..... .....+.+|++++++++||||+++++++.+ ..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46899999999999999999984 56799999865432 234568899999999999999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||+|.|||++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~---~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKS---GRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 999999999988544 46889999999999999999999999 999999999999999999999999999875432
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~ 624 (701)
.....|++.|+|||.+.+..++.++||||||+++|+|++|++||...... ...+..+.. .
T Consensus 155 ---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~ 216 (290)
T cd05580 155 ---------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKV---------R 216 (290)
T ss_pred ---------CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------c
Confidence 23456899999999998888999999999999999999999999765432 122222221 1
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHh
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRD 664 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~ 664 (701)
.|...+..+.+++.+||..+|.+|| ++.+++.|+|++-.+
T Consensus 217 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 217 FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261 (290)
T ss_pred CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence 2222345689999999999999999 899999999986544
No 250
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8e-36 Score=329.11 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=201.1
Q ss_pred HHHhhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCC-CCcEEEEeceec
Q 005343 389 IEAATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQG-PRQFKQEVEILGSMR-HTNMVILLGACP 459 (701)
Q Consensus 389 i~~~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~-HpnIv~l~g~~~ 459 (701)
+....++|.+.+.||+|+||.||+|++.+ ..||+|++....... ...+.+|+.+|.++. ||||+.++|+|.
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 34455678899999999999999998643 359999997654333 346889999999997 999999999985
Q ss_pred C--CCceEEeecCCCChhhHhcccC-------------------------------------------------------
Q 005343 460 E--YGCLVYEYMENGSLEDRLFQKD------------------------------------------------------- 482 (701)
Q Consensus 460 ~--~~~lV~Ey~~~gsL~~~l~~~~------------------------------------------------------- 482 (701)
. ..++||||+.+|+|.+++.+..
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 4 4589999999999999986432
Q ss_pred ----------------------------------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 005343 483 ----------------------------------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPA 522 (701)
Q Consensus 483 ----------------------------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~ 522 (701)
....+++..+..|+.||+.||.|||+.+ |+||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcc
Confidence 1134678888999999999999999998 999999999
Q ss_pred CeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCC
Q 005343 523 NILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGL 601 (701)
Q Consensus 523 NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 601 (701)
|||++.++.+||+|||+++.+..... ........++..|+|||++....++.++|||||||++|||++ |..||..
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~ 344 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSN----YISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPE 344 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccc----cccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCC
Confidence 99999999999999999986532111 011233467889999999998889999999999999999998 8889865
Q ss_pred chHHH---HHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 602 SHQVE---QAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 602 ~~~~~---~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
....+ ..+..+.. ...|...+..+.+++.+||..+|..||++.+|+.. |.+
T Consensus 345 ~~~~~~~~~~~~~~~~--------~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~-L~~ 398 (401)
T cd05107 345 LPMNEQFYNAIKRGYR--------MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL-VGD 398 (401)
T ss_pred CCchHHHHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH-HHH
Confidence 43222 22222211 01222334569999999999999999999999743 443
No 251
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.8e-36 Score=313.95 Aligned_cols=251 Identities=27% Similarity=0.379 Sum_probs=202.2
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
++|+..+.||.|+||.||++.+. +..|++|.+..... .....+.+|+++++.++||||+++++.|.. ..++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35778889999999999999985 56799998876543 234568999999999999999999998844 44899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+.+++|.+++.... ..+++..+..++.|++.||.|||+ .+ ++|+||||+||+++.++.+||+|||++..+....
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 81 MDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred cCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 99999999885433 568889999999999999999999 88 9999999999999999999999999987653211
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch----HHHHHHHcCccccccCccCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH----QVEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~----~~~~~i~~~~~~~~ld~~~~ 623 (701)
.....++..|+|||++.+..++.++||||||+++|+|++|++||.... .....+.. +......
T Consensus 156 --------~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~-----~~~~~~~ 222 (265)
T cd06605 156 --------AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQY-----IVNEPPP 222 (265)
T ss_pred --------hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHH-----HhcCCCC
Confidence 112678899999999999899999999999999999999999986542 11111111 0001111
Q ss_pred CCCHH-HHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 624 GWPVE-AALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~~-~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+.. .+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 223 RLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKK 262 (265)
T ss_pred CCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence 12222 4556899999999999999999999999999863
No 252
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.5e-36 Score=307.07 Aligned_cols=247 Identities=26% Similarity=0.411 Sum_probs=199.6
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||+|+||.||++.. .+..+++|.+..... .....+.+|+.+++.++|||++++++.+.. ..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 488999999999999999987 455699998865432 234568999999999999999999998743 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~~~~ 547 (701)
+++++|.+++.... ...+++..+..++.+++.||.|||+++ |+|+||+|+||+++. ++.+||+|||++..+....
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 99999999986533 345889999999999999999999999 999999999999985 4568999999998764321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~~~~~ 625 (701)
......|+..|+|||.+....++.++||||||+++|+|++|+.||...+....... .+... ..
T Consensus 157 -------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 221 (256)
T cd08220 157 -------KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA--------PI 221 (256)
T ss_pred -------cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC--------CC
Confidence 11235688999999999988899999999999999999999999976543222211 11111 12
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 222 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 222 SDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred CCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 22334568999999999999999999999999873
No 253
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-35 Score=308.54 Aligned_cols=248 Identities=28% Similarity=0.468 Sum_probs=195.5
Q ss_pred hcCceeeeeeeecCceeEEEEEECC--c---eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH--T---SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~--~---~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 464 (701)
.++|...+.||+|+||.||+|.... . .+++|.+...... ....+.+|+++++.++|||++++++++.+ ..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 3578889999999999999998742 2 5899988655322 24568999999999999999999999854 4589
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+++++|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++....
T Consensus 84 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~ 158 (268)
T cd05063 84 ITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVLE 158 (268)
T ss_pred EEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceecc
Confidence 999999999999885432 46899999999999999999999999 9999999999999999999999999998664
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~ 621 (701)
...... ........++.|+|||++....++.++|||||||++|+|+| |+.||..... ....+..+. ..+
T Consensus 159 ~~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~----~~~- 230 (268)
T cd05063 159 DDPEGT---YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF----RLP- 230 (268)
T ss_pred cccccc---eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC----CCC-
Confidence 321111 11112233567999999988889999999999999999998 9999864432 222333221 111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+...+..+.+++.+||+.+|.+||++.+|+.
T Consensus 231 ---~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~ 262 (268)
T cd05063 231 ---APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN 262 (268)
T ss_pred ---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence 12233456899999999999999999999973
No 254
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=7.2e-36 Score=313.04 Aligned_cols=254 Identities=23% Similarity=0.348 Sum_probs=196.4
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
|++.+.||.|++|.||+|.+ .++.|++|++...... ....+.+|+++++.++|||++++++++.+ ..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 66788999999999999987 5677999998765422 23568899999999999999999999854 448999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
+++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++.+....
T Consensus 81 -~~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-- 153 (283)
T cd07835 81 -DLDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-- 153 (283)
T ss_pred -CcCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc--
Confidence 4689888754332 36899999999999999999999998 9999999999999999999999999997653221
Q ss_pred ccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH---c-Cc-----------
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---N-GT----------- 613 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---~-~~----------- 613 (701)
.......+++.|+|||++.+. .++.++||||||+++|+|+||++||........... . +.
T Consensus 154 ----~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07835 154 ----RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTS 229 (283)
T ss_pred ----cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhh
Confidence 112334678899999987654 578999999999999999999999976554322211 0 00
Q ss_pred -------cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 -------FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 -------~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+...............+..+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 230 LPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283 (283)
T ss_pred chhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence 00000001111112223468899999999999999999999999874
No 255
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.4e-35 Score=311.82 Aligned_cols=253 Identities=24% Similarity=0.352 Sum_probs=207.7
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYE 467 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~E 467 (701)
.+++|.....||.|+||.||+|.+. +..|++|++..... ....+.+|+++++.++|||++++++.|. +..++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 5667888999999999999999985 67799999876543 4567899999999999999999999874 44589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+++++|.+++.... ..+++..+..++.|++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 170 (286)
T cd06614 96 YMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK 170 (286)
T ss_pred ccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence 999999999986543 36899999999999999999999999 9999999999999999999999999987553221
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--cCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--NGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~~~~~~~ld~~~~~~ 625 (701)
. ......++..|++||++.+..++.++|+|||||++|+|++|+.||...+....... ....... ..
T Consensus 171 ~------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~ 238 (286)
T cd06614 171 S------KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL------KN 238 (286)
T ss_pred h------hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC------cc
Confidence 1 11334578899999999888899999999999999999999999986654332222 1111111 11
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+...+..+.+++.+||+.+|..||++.+++.|.|++-
T Consensus 239 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred hhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 1123456899999999999999999999999999885
No 256
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=1.4e-35 Score=315.19 Aligned_cols=261 Identities=21% Similarity=0.257 Sum_probs=202.7
Q ss_pred cCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecCCC--ceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPEYG--CLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV~ 466 (701)
++|.+.+.||+|+||.||++.+.. ..|++|.+..... .....+.+|+++++.++||||+++++.+.+.. ++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 468999999999999999999854 5699998876532 22346789999999999999999999985544 8999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||++||+|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||+++.....
T Consensus 81 e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~ 154 (305)
T cd05609 81 EYVEGGDCATLLKNI---GALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMS 154 (305)
T ss_pred ecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCcC
Confidence 999999999998443 35889999999999999999999999 999999999999999999999999998742111
Q ss_pred CCc---------ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccc
Q 005343 547 AAD---------TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFS 615 (701)
Q Consensus 547 ~~~---------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~ 615 (701)
... ...........|+..|+|||++....++.++|+|||||++|+|++|..||..... +...+..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~- 233 (305)
T cd05609 155 LTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI- 233 (305)
T ss_pred ccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccc-
Confidence 100 0011112235678899999999888999999999999999999999999965432 1222222211
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHHHhcc
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRLRDLG 666 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l~~~~ 666 (701)
..+.. +...+..+.+++.+||+.+|.+||+ +.+++.|+|+.-.+..
T Consensus 234 --~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~ 282 (305)
T cd05609 234 --EWPEG---DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWN 282 (305)
T ss_pred --CCCCc---cccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHH
Confidence 11111 1123445899999999999999998 6888999998654443
No 257
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.4e-35 Score=315.00 Aligned_cols=257 Identities=24% Similarity=0.387 Sum_probs=200.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC---------CceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD---------HTSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~---------~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 460 (701)
..++|.+.+.||+|+||.||+|++. ...||+|.+..... .....+.+|+.+++.+ +||||++++++|..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3467899999999999999999752 22599998875432 2345689999999999 89999999999854
Q ss_pred --CCceEEeecCCCChhhHhcccCC-------------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 005343 461 --YGCLVYEYMENGSLEDRLFQKDN-------------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANIL 525 (701)
Q Consensus 461 --~~~lV~Ey~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NIL 525 (701)
..++||||+++|+|.+++..... ...+++..+..++.||+.||.|||+++ |+||||||+|||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence 34899999999999999865321 235788899999999999999999999 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH
Q 005343 526 LDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ 604 (701)
Q Consensus 526 l~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 604 (701)
++.++.+||+|||+++.+..... ........++..|+|||++.+..++.++||||||+++|+|++ |.+||.....
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~ 245 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDY----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 245 (304)
T ss_pred EcCCCcEEECCCccceecccccc----cccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH
Confidence 99999999999999987643211 111223456678999999998899999999999999999998 7888865432
Q ss_pred --HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 605 --VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 605 --~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
....+..+.. ...+..++..+.+++.+||..+|.+||++.+++. .+.++..
T Consensus 246 ~~~~~~~~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~-~l~~~~~ 298 (304)
T cd05101 246 EELFKLLKEGHR--------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVE-DLDRILT 298 (304)
T ss_pred HHHHHHHHcCCc--------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHH-HHHHHHH
Confidence 2222322211 1122334456899999999999999999999974 4555543
No 258
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=4e-36 Score=315.15 Aligned_cols=254 Identities=25% Similarity=0.319 Sum_probs=192.6
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||+|+||.||+|.+ .+..|++|.+...... ....+.+|+.+++.++||||+++++++.+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 488899999999999999998 4567999998654322 23457889999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. ++|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 ~~-~~l~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~- 153 (284)
T cd07839 81 CD-QDLKKYFDSC--NGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV- 153 (284)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC-
Confidence 96 5787776443 245899999999999999999999999 9999999999999999999999999998653221
Q ss_pred cccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCC-CCchHHHH---HHHc-Cc--------c
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAM-GLSHQVEQ---AIRN-GT--------F 614 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf-~~~~~~~~---~i~~-~~--------~ 614 (701)
.......+++.|+|||++.+. .++.++|||||||++|+|+||..|+ ...+.... .... +. .
T Consensus 154 -----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd07839 154 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGV 228 (284)
T ss_pred -----CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHh
Confidence 112345678999999987664 4799999999999999999998775 33221111 1000 00 0
Q ss_pred ccccC-ccCCCC---------CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 615 SELLD-PTVTGW---------PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 615 ~~~ld-~~~~~~---------p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
....+ .....+ .......+.+++.+||..+|.+|||+.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 229 SKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284 (284)
T ss_pred hhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence 00000 000000 01223468899999999999999999999999884
No 259
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=331.76 Aligned_cols=254 Identities=26% Similarity=0.424 Sum_probs=200.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-----ce-EEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceec--C
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-----TS-VAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACP--E 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-----~~-vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~ 460 (701)
.-++-.+.++||+|+||.||+|.+.- .. ||+|..+... ......|.+|.++|+.++|||||++||++- +
T Consensus 155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~ 234 (474)
T KOG0194|consen 155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE 234 (474)
T ss_pred eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC
Confidence 34455566899999999999999732 13 8999988633 223456999999999999999999999983 4
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..++|||+|+||+|.++|.+... .++..++..++.+.|.||+|||+.+ +|||||-..|+|++.++.+||+||||+
T Consensus 235 Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vKISDFGLs 309 (474)
T KOG0194|consen 235 PLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVKISDFGLS 309 (474)
T ss_pred ccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEEeCccccc
Confidence 45899999999999999966543 5899999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHH-HcCcccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAI-RNGTFSE 616 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i-~~~~~~~ 616 (701)
+.-..- .......--...|+|||.+.++.|+.++|||||||++||+++ |..||.+.. ++...+ .++...
T Consensus 310 ~~~~~~------~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~- 382 (474)
T KOG0194|consen 310 RAGSQY------VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRM- 382 (474)
T ss_pred cCCcce------eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccC-
Confidence 753210 001111134578999999999999999999999999999999 788887554 344444 333211
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 617 LLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 617 ~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
..|...+..+..++.+||..+|.+||++.++. ..+..+...
T Consensus 383 -------~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~-~~l~~~~~~ 423 (474)
T KOG0194|consen 383 -------PIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK-KKLEALEKK 423 (474)
T ss_pred -------CCCCCCHHHHHHHHHHhccCChhhccCHHHHH-HHHHHHHhc
Confidence 22334555689999999999999999999986 344444443
No 260
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1e-35 Score=314.79 Aligned_cols=257 Identities=26% Similarity=0.418 Sum_probs=194.3
Q ss_pred hcCceeeeeeeecCceeEEEEEECC------------------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDH------------------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVI 453 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~------------------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~ 453 (701)
.++|++.+.||+|+||.||++.+.+ ..||+|++...... ....+.+|+.+++.++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 3569999999999999999986432 24899998765322 3456899999999999999999
Q ss_pred Eeceec--CCCceEEeecCCCChhhHhcccCC--------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 005343 454 LLGACP--EYGCLVYEYMENGSLEDRLFQKDN--------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPAN 523 (701)
Q Consensus 454 l~g~~~--~~~~lV~Ey~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~N 523 (701)
+++++. +..++||||+++|+|.+++..... ...+++..+..++.|++.||.|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 999984 445899999999999998865321 124778889999999999999999999 9999999999
Q ss_pred eeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCC
Q 005343 524 ILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT--ARPAMGL 601 (701)
Q Consensus 524 ILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt--G~~pf~~ 601 (701)
||++.++.+||+|||+++.+..... ........+++.|++||....+.++.++|||||||++|||+| |..||..
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~ 236 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDY----YRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQ 236 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcc----eeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccc
Confidence 9999999999999999986533211 111123345678999999888899999999999999999998 6688864
Q ss_pred chHHHHHHHcCcc-ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 602 SHQVEQAIRNGTF-SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 602 ~~~~~~~i~~~~~-~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
....+.....+.+ ...........+..++..+.+++.+||+.+|.+||++.+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 237 LSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred cChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 4322111110000 000000001112233456899999999999999999999974
No 261
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.8e-35 Score=302.24 Aligned_cols=249 Identities=28% Similarity=0.427 Sum_probs=204.1
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
.|...+.||.|+||.||++.+. +..+++|++..........+.+|+++++.++|||++.+++.+.. ..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 3788899999999999999985 66799999987665456789999999999999999999998843 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+++|.+++.... ..+++..+..++.|++.||.|||..+ ++||||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 81 GGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred CCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 999999885543 46899999999999999999999998 99999999999999999999999999987644321
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAA 630 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~ 630 (701)
.....|+..|++||++....++.++||||||+++|+|++|++||................ -+.. ..+...+
T Consensus 154 -----~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~ 224 (253)
T cd05122 154 -----RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG---PPGL-RNPEKWS 224 (253)
T ss_pred -----ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC---CCCc-CcccccC
Confidence 234568899999999988889999999999999999999999997664333222211100 0111 1111124
Q ss_pred HHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 631 LSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
..+.+++.+||..+|.+||++.+++.|+|
T Consensus 225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 56899999999999999999999999876
No 262
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-35 Score=312.62 Aligned_cols=248 Identities=22% Similarity=0.307 Sum_probs=201.1
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~ 471 (701)
|...+.||+|+||.||++.. .+..+++|++........+.+.+|+.+++.++||||+++++++. +..++|+||+.+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 44557899999999999987 45669999886554445566899999999999999999999873 456899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.++|+|||++........
T Consensus 101 ~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--- 170 (285)
T cd06648 101 GALTDIVTH----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--- 170 (285)
T ss_pred CCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCCc---
Confidence 999998854 35888999999999999999999999 99999999999999999999999999876532211
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
......|++.|+|||.+.+..++.++|||||||++|+|++|++||...+.... .+..+.. +.. ..+...
T Consensus 171 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~ 241 (285)
T cd06648 171 ---RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLP-----PKL-KNLHKV 241 (285)
T ss_pred ---ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCC-----CCC-cccccC
Confidence 12345689999999999888899999999999999999999999865543222 1222211 111 112223
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+..+.+++.+||..+|.+||++.+++.|+|++.
T Consensus 242 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 274 (285)
T cd06648 242 SPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274 (285)
T ss_pred CHHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence 456999999999999999999999999999875
No 263
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.4e-35 Score=311.96 Aligned_cols=248 Identities=29% Similarity=0.478 Sum_probs=196.2
Q ss_pred hcCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 462 (701)
.++|++.+.||+|+||.||+|.+. ++.||+|++...... ....+.+|+.+++.++||||++++++|.+ ..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 457999999999999999999873 356999998765322 23568899999999999999999999854 45
Q ss_pred ceEEeecCCCChhhHhcccC-------------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCC
Q 005343 463 CLVYEYMENGSLEDRLFQKD-------------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPAN 523 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~N 523 (701)
++||||+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 89999999999999986421 1235788899999999999999999999 9999999999
Q ss_pred eeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCc
Q 005343 524 ILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLS 602 (701)
Q Consensus 524 ILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 602 (701)
||++.++.+||+|||++..+..... ........++..|+|||.+.+..++.++|||||||++|+|++ |..||...
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADY----YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred eEecCCCceEECccccceecccCcc----ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999876532211 001122345677999999988899999999999999999998 88787533
Q ss_pred h--HHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 603 H--QVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 603 ~--~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
. .....+..+... ..+...+..+.+++.+||+.+|.+||++.+++
T Consensus 237 ~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~ 283 (288)
T cd05050 237 AHEEVIYYVRDGNVL--------SCPDNCPLELYNLMRLCWSKLPSDRPSFASIN 283 (288)
T ss_pred CHHHHHHHHhcCCCC--------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 2 222333333321 12333445699999999999999999999986
No 264
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.7e-35 Score=308.01 Aligned_cols=247 Identities=29% Similarity=0.459 Sum_probs=195.4
Q ss_pred cCceeeeeeeecCceeEEEEEEC-----CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-----HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-----~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
++|.+.+.||+|+||.||+|.+. ...+|+|.+...... ....+.+|+.++..++||||+++++++.+ ..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46889999999999999999873 225999988654322 23568999999999999999999999843 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd05066 84 TEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 158 (267)
T ss_pred EEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCccccccc
Confidence 99999999999986543 35899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
.... ........++..|++||++.+..++.++|+|||||++|+|++ |..||..... ....+.++.. .+
T Consensus 159 ~~~~---~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~----~~-- 229 (267)
T cd05066 159 DPEA---AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYR----LP-- 229 (267)
T ss_pred ccce---eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCc----CC--
Confidence 2211 111122334568999999998899999999999999999886 9999864432 2222332211 01
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.+...+..+.+++.+|++.+|.+||++.+++.
T Consensus 230 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 230 --APMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred --CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 12233456899999999999999999999863
No 265
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.6e-35 Score=306.65 Aligned_cols=242 Identities=27% Similarity=0.376 Sum_probs=186.0
Q ss_pred eeeeecCceeEEEEEEC-----CceEEEEEeCCCC-CCChHHHHHHHHHHHhCCCCcEEEEeceec--C-CCceEEeecC
Q 005343 400 RKIGEGGYGPVYKAQLD-----HTSVAIKVLGPDI-SQGPRQFKQEVEILGSMRHTNMVILLGACP--E-YGCLVYEYME 470 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~-----~~~vAiK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~-~~~lV~Ey~~ 470 (701)
+.||+|+||.||+|.+. ...||+|.+.... ......+.+|+.+++.++||||++++++|. + ..++||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 36899999999999863 2359999875432 123456889999999999999999999873 2 3589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+......
T Consensus 81 ~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~- 154 (262)
T cd05058 81 HGDLRNFIRSET--HNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY- 154 (262)
T ss_pred CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce-
Confidence 999999985432 34577778889999999999999999 999999999999999999999999999765322110
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.........++..|+|||++....++.++|||||||++|||++ |.+||...+... ..+..+.. ...+.
T Consensus 155 -~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 225 (262)
T cd05058 155 -SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR--------LLQPE 225 (262)
T ss_pred -eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC--------CCCCC
Confidence 1111223456778999999988899999999999999999999 567776543321 12222211 11122
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~ 254 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVS 254 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 23446899999999999999999999974
No 266
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.6e-35 Score=304.88 Aligned_cols=246 Identities=30% Similarity=0.494 Sum_probs=198.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
..++|.+.+.||+|+||.||+|.+++ ..|+||.+.... .....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 45689999999999999999998854 569999987654 445779999999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++.... ...+++..+..++.+++.||.|||+++ ++|+||||+||+++.++.+||+|||++..+....
T Consensus 83 ~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (261)
T cd05034 83 MSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE- 157 (261)
T ss_pred cCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh-
Confidence 99999999885532 346899999999999999999999999 9999999999999999999999999998664311
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~ 625 (701)
........++..|+|||.+.+..++.++|||||||++|+|+| |+.||..... ....+..+.. ...
T Consensus 158 ----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 225 (261)
T cd05034 158 ----YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR--------MPR 225 (261)
T ss_pred ----hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC--------CCC
Confidence 111122335678999999998899999999999999999999 9999965432 2222222110 011
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
+...+..+.+++.+||..+|.+||++.+++
T Consensus 226 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 255 (261)
T cd05034 226 PPNCPEELYDLMLQCWDKDPEERPTFEYLQ 255 (261)
T ss_pred CCCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence 222345689999999999999999999886
No 267
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.4e-35 Score=307.87 Aligned_cols=249 Identities=24% Similarity=0.365 Sum_probs=196.5
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
++|.+.+.||.|+||.||+|.. .+..++||.+...... ....+.+|+.+++.++||||++++++|.+ ..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999997 5667999987653322 23468899999999999999999998844 458999
Q ss_pred eecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+++++|.+++... .....+++..+..++.||+.||.|||+.+ ++|+||||+||+++.++.++|+|||++..+..
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999988542 22356899999999999999999999999 99999999999999999999999999886643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHcCccccccCccCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-VEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~-~~~~i~~~~~~~~ld~~~~~ 624 (701)
... ......|+..|+|||++.+..++.++|+||||+++|+|++|..||..... ...... .+.....+..
T Consensus 159 ~~~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~-- 228 (267)
T cd08229 159 KTT------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPPL-- 228 (267)
T ss_pred CCc------ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCCC--
Confidence 211 11345688999999999888899999999999999999999999854321 111111 0101111111
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+...+..+.+++.+||..+|.+|||+.+|+
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~ 259 (267)
T cd08229 229 PSDHYSEELRQLVNMCINPDPEKRPDITYVY 259 (267)
T ss_pred CcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence 1123455699999999999999999999886
No 268
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=8.4e-36 Score=317.35 Aligned_cols=259 Identities=25% Similarity=0.331 Sum_probs=195.9
Q ss_pred CceeeeeeeecCceeEEEEEEC----CceEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecCC----Cc
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD----HTSVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPEY----GC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~----~~~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~----~~ 463 (701)
.|.+.+.||+|+||.||+|... +..||+|.+.... ......+.+|+.+++.++||||++++++|.+. .+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4888999999999999999984 4679999998743 33345688999999999999999999998544 58
Q ss_pred eEEeecCCCChhhHhcccC--CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC----CCcEEEEee
Q 005343 464 LVYEYMENGSLEDRLFQKD--NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ----NYVSKISDV 537 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~----~~~~KL~DF 537 (701)
+||||+++ +|.+.+.... ....+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 6766664322 2246889999999999999999999999 999999999999999 999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-----------
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQV----------- 605 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~----------- 605 (701)
|++..+...... ........+|+.|+|||++.+ ..++.++|||||||++|+|++|++||......
T Consensus 157 g~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 157 GLARLFNAPLKP---LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred ccccccCCCccc---ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 999876432211 112234578999999998766 45899999999999999999999999643321
Q ss_pred -HHHHH---------------cCcccccc-CccCCCCC-----H------HHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 606 -EQAIR---------------NGTFSELL-DPTVTGWP-----V------EAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 606 -~~~i~---------------~~~~~~~l-d~~~~~~p-----~------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
...+. ...+.... ......++ . .....+.+++.+||+.+|++||++.+++.|
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000 00000000 00000111 0 223458899999999999999999999999
Q ss_pred HHH
Q 005343 658 ELI 660 (701)
Q Consensus 658 ~~~ 660 (701)
+|+
T Consensus 314 ~~f 316 (316)
T cd07842 314 PYF 316 (316)
T ss_pred CCC
Confidence 885
No 269
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1e-35 Score=322.03 Aligned_cols=251 Identities=26% Similarity=0.396 Sum_probs=196.1
Q ss_pred hhcCceeeeeeeecCceeEEEEEE-------CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL-------DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE-- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~-------~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-- 460 (701)
..++|++.+.||+|+||.||+|.+ .++.||||+++..... ....+.+|+.++..+ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (343)
T cd05103 5 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 84 (343)
T ss_pred chhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCC
Confidence 346799999999999999999974 2456999999765422 234588999999999 68999999998843
Q ss_pred -CCceEEeecCCCChhhHhcccCC--------------------------------------------------------
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDN-------------------------------------------------------- 483 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~-------------------------------------------------------- 483 (701)
..++||||+++|+|.+++.....
T Consensus 85 ~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 85 GPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred CceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 34799999999999998854321
Q ss_pred --------CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccccc
Q 005343 484 --------SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYH 555 (701)
Q Consensus 484 --------~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~ 555 (701)
...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+..... ...
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~----~~~ 237 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPD----YVR 237 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcc----hhh
Confidence 124688888999999999999999999 99999999999999999999999999986532211 111
Q ss_pred ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch---HHHHHHHcCccccccCccCCCCCHHHHH
Q 005343 556 MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH---QVEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 556 ~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
.....+++.|+|||.+.+..++.++|||||||++|+|++ |.+||.... .....+..+.... . |...+.
T Consensus 238 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~ 309 (343)
T cd05103 238 KGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR-----A---PDYTTP 309 (343)
T ss_pred cCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC-----C---CCCCCH
Confidence 223345678999999988899999999999999999997 899986532 2233333332111 1 111234
Q ss_pred HHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 632 SIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.+.+++..||+.+|.+||++.+|+.|
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHH
Confidence 58999999999999999999999865
No 270
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=1.5e-35 Score=308.55 Aligned_cols=249 Identities=27% Similarity=0.417 Sum_probs=194.5
Q ss_pred cCceeeeeeeecCceeEEEEEECC-----ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV 465 (701)
..|.+.+.||+|+||.||+|.+.. ..|+||++..... .....|..|+.+++.++||||+++++++.+. .++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 358899999999999999999742 2499999876432 2345799999999999999999999998543 4899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||++..+..
T Consensus 84 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 84 TEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred EecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence 99999999999885432 45899999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
..... ..........+..|+|||++....++.++|||||||++|||++ |.+||...+. ....+.... .
T Consensus 159 ~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~--------~ 229 (269)
T cd05065 159 DTSDP-TYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY--------R 229 (269)
T ss_pred Ccccc-ccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC--------c
Confidence 22111 0000111122457999999999999999999999999999986 9999865432 222222111 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...+...+..+.+++.+||..+|.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 263 (269)
T cd05065 230 LPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVS 263 (269)
T ss_pred CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 1112334456899999999999999999999874
No 271
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-35 Score=320.36 Aligned_cols=259 Identities=24% Similarity=0.306 Sum_probs=197.4
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC-CCChHHHHHHHHHHHhCCCCcEEEEeceecC-------CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI-SQGPRQFKQEVEILGSMRHTNMVILLGACPE-------YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~ 462 (701)
.++|.+.+.||+|+||.||+|.+ .++.||+|++.... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 57899999999999999999987 45679999986432 2234568889999999999999999987632 24
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+. ++|...+.. ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~----~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~ 155 (336)
T cd07849 84 YIVQELME-TDLYKLIKT----QHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLARI 155 (336)
T ss_pred EEEehhcc-cCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccceee
Confidence 79999995 578776632 35899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---H---cC---
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---R---NG--- 612 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~---~~--- 612 (701)
...... .........||..|+|||.+.+ ..++.++|||||||++|+|++|++||...+...... . ..
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~ 232 (336)
T cd07849 156 ADPEHD---HTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232 (336)
T ss_pred cccccc---ccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 543211 1112234578999999997654 568999999999999999999999997543221110 0 00
Q ss_pred ccccccC----------ccCC--CC---CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 613 TFSELLD----------PTVT--GW---PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 613 ~~~~~ld----------~~~~--~~---p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+..+.+ +... .+ .......+.+++.+||+.+|.+||++.+++.|+|++-
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~ 297 (336)
T cd07849 233 DLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQ 297 (336)
T ss_pred HHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccc
Confidence 0000000 0000 00 0112345889999999999999999999999999884
No 272
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=349.90 Aligned_cols=261 Identities=26% Similarity=0.302 Sum_probs=209.7
Q ss_pred HHHHhhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEeceecC--
Q 005343 388 EIEAATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGACPE-- 460 (701)
Q Consensus 388 ei~~~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 460 (701)
++....++|.+++.||+|+||.|..++++++. ||+|++++-. .....-|..|-.||..-+.+.|+.|.-+|.|
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 33445678999999999999999999997665 9999998732 2334568999999999999999999999965
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
+.|+|||||+||+|..++.+.. ++++.....++.+|..||.-||+.| +|||||||+|||||..|++||+|||.|
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccchhH
Confidence 4589999999999999885544 6888888899999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccC-----CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-----GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFS 615 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~ 615 (701)
-.+..++. ......+|||.|++||+++. +.|++.+||||+||++||||.|..||..+..++..-.--+..
T Consensus 223 lkm~~dG~-----V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk 297 (1317)
T KOG0612|consen 223 LKMDADGT-----VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHK 297 (1317)
T ss_pred HhcCCCCc-----EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchh
Confidence 87754321 23467899999999998753 569999999999999999999999998776665432211111
Q ss_pred cccCccCCCCC--HHHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHHHhc
Q 005343 616 ELLDPTVTGWP--VEAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRLRDL 665 (701)
Q Consensus 616 ~~ld~~~~~~p--~~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l~~~ 665 (701)
..-.+| .+.+.+..+||.+.+. +|..|.. +.++-.|+||.=-+|
T Consensus 298 -----~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 298 -----ESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred -----hhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 112344 3455668888888776 6777777 999999977764333
No 273
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.5e-35 Score=314.65 Aligned_cols=255 Identities=23% Similarity=0.383 Sum_probs=198.2
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC---------CceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD---------HTSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~---------~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 460 (701)
..++|.+.+.||+|+||.||+|... ...||+|.+..... .....+.+|+.+++.+ +||||++++++|.+
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQ 89 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc
Confidence 3457899999999999999999752 23489998875432 2245688999999999 69999999999854
Q ss_pred --CCceEEeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 005343 461 --YGCLVYEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANIL 525 (701)
Q Consensus 461 --~~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NIL 525 (701)
..++||||+++|+|.+++.... ....+++..+..++.||+.||.|||+++ |+||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nil 166 (314)
T cd05099 90 EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVL 166 (314)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEE
Confidence 3489999999999999986532 1245889999999999999999999999 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH
Q 005343 526 LDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ 604 (701)
Q Consensus 526 l~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 604 (701)
++.++.+||+|||+++.+...... .......++..|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYY----KKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EcCCCcEEEccccccccccccccc----cccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999866322110 01122234568999999988899999999999999999999 8899865432
Q ss_pred --HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 605 --VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 605 --~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
....+..+.. ...+..++..+.+++.+||..+|.+||++.+++. .+.++
T Consensus 243 ~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~-~l~~~ 293 (314)
T cd05099 243 EELFKLLREGHR--------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE-ALDKV 293 (314)
T ss_pred HHHHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH-HHHHH
Confidence 2233333221 1122334456889999999999999999999874 33333
No 274
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.3e-35 Score=305.97 Aligned_cols=250 Identities=28% Similarity=0.428 Sum_probs=199.9
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~Ey 468 (701)
+|.+.+.||.|+||.||+|... +..||+|.+..... .....+.+|+.+++.++||||+++++.+.+. .++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5889999999999999999984 56699999865421 2345688999999999999999999998544 4899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-cEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~~~~~~ 547 (701)
+++++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||||+||+++.++ .+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQR-GVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999886533 345799999999999999999999999 99999999999998875 56999999998764321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCH
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
. ......|++.|+|||++....++.++|+||||+++|+|++|.+||............ ......+. +.
T Consensus 157 ~------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~----~~ 224 (257)
T cd08225 157 E------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI--CQGYFAPI----SP 224 (257)
T ss_pred c------cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH--hcccCCCC----CC
Confidence 1 112346889999999998888999999999999999999999999765433222211 11111111 12
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 225 NFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 223468999999999999999999999999874
No 275
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.3e-36 Score=309.71 Aligned_cols=247 Identities=25% Similarity=0.279 Sum_probs=202.5
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
+|.+.+.||.|+||.||+|.+. +..|++|++..... ...+.+.+|++++++++||||+++++.+.+ ..++|||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5889999999999999999985 56799999876432 234678999999999999999999998844 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+.+++|.+++... .++++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999988543 46889999999999999999999999 9999999999999999999999999988764321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~ 625 (701)
......|+..|+|||++.+..++.++|+||||+++|+|++|+.||..... .......... .....
T Consensus 155 -------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~------~~~~~ 221 (258)
T cd05578 155 -------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET------ADVLY 221 (258)
T ss_pred -------cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc------ccccC
Confidence 12345688899999999988899999999999999999999999975542 2222221110 11122
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCCh--hhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDL--VSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~--~~vl~~~~~ 660 (701)
|...+..+.+++.+||..+|.+||++ .+++.|+|+
T Consensus 222 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 222 PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred cccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 33344668999999999999999999 999988874
No 276
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-35 Score=320.12 Aligned_cols=254 Identities=24% Similarity=0.282 Sum_probs=198.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC-------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE------- 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 460 (701)
..++|.+.+.||+|+||.||+|.. .++.||||++..... .....+.+|+.+++.++||||++++++|..
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 457899999999999999999998 456799999865432 223467789999999999999999998732
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..|+||||+. ++|.+.+.. .++...+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 164 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM-----DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGL 164 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCcc
Confidence 2489999995 588877732 2788889999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HH-cCc--
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IR-NGT-- 613 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~-~~~-- 613 (701)
++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+..... +. .+.
T Consensus 165 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 237 (353)
T cd07850 165 ARTAGTSF-------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237 (353)
T ss_pred ceeCCCCC-------CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 98653321 123446889999999999999999999999999999999999999755422111 00 000
Q ss_pred -------------------------cccccC----ccCCC-CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 614 -------------------------FSELLD----PTVTG-WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 614 -------------------------~~~~ld----~~~~~-~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
+..+.. +.... .+...+..+.+++.+||..+|++||++.++|.|+|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 000000 00000 0112345688999999999999999999999999987
No 277
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.2e-35 Score=312.31 Aligned_cols=255 Identities=24% Similarity=0.289 Sum_probs=195.3
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|...+.||+|+||.||++.+. ++.||+|.+...... ....+.+|+.++.++. ||||++++|++.+ ..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4556678999999999999984 566999998765432 3446889999999996 9999999998743 44799999
Q ss_pred cCCCChhhHhcc--cCCCCCCChHHHHHHHHHHHHHHHHHhhc-CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 469 MENGSLEDRLFQ--KDNSPPIHWSIRFKIAAEIATALLFLHQN-KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 469 ~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~qia~aL~~LH~~-~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
+. ++|.++... ......+++.....++.+++.||.|||+. + |+||||||+|||++.++.+||+|||+++.+..
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 465553321 12235689999999999999999999975 7 99999999999999999999999999976532
Q ss_pred CCCcccccccccccccCCCccCcccccCC---CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTG---MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
.. ......|++.|+|||.+.+. .++.++|||||||++|+|++|++||.........+..... ...+.+
T Consensus 161 ~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~ 231 (288)
T cd06616 161 SI-------AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK--GDPPIL 231 (288)
T ss_pred CC-------ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC--CCCCcC
Confidence 21 11334688999999988776 6899999999999999999999999755432222221110 001111
Q ss_pred C-CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 623 T-GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 623 ~-~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
. ..+...+..+.+|+.+||..+|.+||++.+|+.|+|++.
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 232 SNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred CCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 1 111234557999999999999999999999999999874
No 278
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.9e-35 Score=302.50 Aligned_cols=239 Identities=25% Similarity=0.391 Sum_probs=189.9
Q ss_pred eeeeecCceeEEEEEE-CCceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCChh
Q 005343 400 RKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSLE 475 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 475 (701)
++||+|+||.||+|.. +++.||+|++....... ...+.+|+++++.++||||++++++|.. ..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3689999999999987 45569999987654322 3358899999999999999999999854 458999999999999
Q ss_pred hHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccccc
Q 005343 476 DRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYH 555 (701)
Q Consensus 476 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~ 555 (701)
+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++........ ..
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-----~~ 150 (250)
T cd05085 81 SFLRKKK--DELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY-----SS 150 (250)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceecccccc-----cc
Confidence 9885432 35789999999999999999999999 99999999999999999999999999876432211 01
Q ss_pred ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccccccCccCCCCCHHHHHH
Q 005343 556 MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 556 ~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
.....+++.|+|||++.++.++.++||||||+++|+|++ |..||...... ...+..+... ..+...+..
T Consensus 151 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 222 (250)
T cd05085 151 SGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM--------SCPQKCPDD 222 (250)
T ss_pred CCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC--------CCCCCCCHH
Confidence 122244677999999999999999999999999999998 99999655432 2222222111 112233456
Q ss_pred HHHHHHHhhccCcCCCCChhhhhh
Q 005343 633 IAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+.+++.+||..+|++||++.+++.
T Consensus 223 ~~~li~~~l~~~p~~Rp~~~~l~~ 246 (250)
T cd05085 223 VYKVMQRCWDYKPENRPKFSELQK 246 (250)
T ss_pred HHHHHHHHcccCcccCCCHHHHHH
Confidence 899999999999999999999974
No 279
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.7e-35 Score=310.89 Aligned_cols=257 Identities=24% Similarity=0.373 Sum_probs=195.9
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
++|.+.+.||+|+||.||+|.+. ++.|++|.+..... .....+.+|+++++.++||||+++++++.+ ..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57999999999999999999974 56799998865432 223568899999999999999999999854 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~~~ 546 (701)
|++ ++|.+.+.... ...+++.....++.||+.||.|||+.+ ++||||+|+||+++. ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSP-DFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCC-CCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 57877764332 234678888899999999999999999 999999999999985 567999999999765322
Q ss_pred CCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cc-ccccc--
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GT-FSELL-- 618 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~-~~~~l-- 618 (701)
. .......+++.|+|||++.+ ..++.++|||||||++|+|+||++||............ +. .....
T Consensus 157 ~------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (294)
T PLN00009 157 V------RTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG 230 (294)
T ss_pred c------cccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence 1 11234467899999998765 45789999999999999999999999765433222110 00 00000
Q ss_pred -----C--ccCCCC--------CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 619 -----D--PTVTGW--------PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 619 -----d--~~~~~~--------p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
+ .....| ....+..+.+++.+|++.+|.+||++.+++.|+|++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence 0 000000 112234588999999999999999999999999987
No 280
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=7.3e-35 Score=300.62 Aligned_cols=244 Identities=26% Similarity=0.454 Sum_probs=196.0
Q ss_pred cCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
+.|.+.+.||+|+||.||+|.+. +..+++|.+.... .....+.+|+++++.++|||++++++++.+ ..++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46888999999999999999885 6679999886543 345679999999999999999999999844 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++.... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 155 (256)
T cd05112 83 HGCLSDYLRAQR--GKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-- 155 (256)
T ss_pred CCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc--
Confidence 999999885432 35789999999999999999999999 99999999999999999999999999876532211
Q ss_pred cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
.......++..|+|||++.++.++.++||||||+++|+|++ |++||..... ....+..+. ....+.
T Consensus 156 ---~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~------ 224 (256)
T cd05112 156 ---TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF--RLYKPR------ 224 (256)
T ss_pred ---cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC--CCCCCC------
Confidence 01122345678999999998899999999999999999998 9999975542 222222221 111111
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.+++.+||..+|.+||++.+++.
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~ 253 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLH 253 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 12346899999999999999999999974
No 281
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.2e-35 Score=304.52 Aligned_cols=231 Identities=26% Similarity=0.457 Sum_probs=184.7
Q ss_pred eeeeecCceeEEEEEECCce------------EEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec-CCCceEE
Q 005343 400 RKIGEGGYGPVYKAQLDHTS------------VAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP-EYGCLVY 466 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~------------vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~-~~~~lV~ 466 (701)
+.||+|+||.||+|.+.++. |++|++...... ...+.+|+.+++.++||||++++|+|. ...++||
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~ 79 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVE 79 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEE
Confidence 36999999999999985443 788877655433 677999999999999999999999875 3458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-------cEEEEeecc
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-------VSKISDVGL 539 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-------~~KL~DFGl 539 (701)
||+++|+|.+++..... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++ .+||+|||+
T Consensus 80 e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 80 EYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 99999999998865432 6889999999999999999999999 99999999999999887 799999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCC--CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCcc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG--MLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTF 614 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~ 614 (701)
+..... .....++..|+|||++... .++.++|||||||++|+|++ |..||....... ..+....
T Consensus 155 a~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~- 223 (259)
T cd05037 155 PITVLS----------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQH- 223 (259)
T ss_pred cccccc----------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcCC-
Confidence 876532 1234567789999998876 78999999999999999999 577775543211 1111110
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
. ++......+.+++.+||..+|.+||++.+++.
T Consensus 224 -------~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 256 (259)
T cd05037 224 -------R--LPMPDCAELANLINQCWTYDPTKRPSFRAILR 256 (259)
T ss_pred -------C--CCCCCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence 0 11111156899999999999999999999874
No 282
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=5.1e-35 Score=311.20 Aligned_cols=249 Identities=27% Similarity=0.366 Sum_probs=198.1
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
...|.+.+.||+|+||.||+|.. .+..|++|.+....... ...+.+|+.+++.++||||++++++|.+ ..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 34588899999999999999997 46679999886543322 2458899999999999999999999844 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+. |+|.+.+.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++....+
T Consensus 94 ~e~~~-g~l~~~~~~~~--~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 94 MEYCL-GSASDILEVHK--KPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HHhhC-CCHHHHHHHcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 99996 67777664332 35899999999999999999999999 99999999999999999999999999876532
Q ss_pred CCCcccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
. ....|+..|+|||++. .+.++.++||||||+++|+|+||++||...+.......... ...+..
T Consensus 168 ~----------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~---~~~~~~ 234 (307)
T cd06607 168 A----------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ---NDSPTL 234 (307)
T ss_pred C----------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc---CCCCCC
Confidence 2 2346788999999874 45688999999999999999999999976554332221110 000111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+...+..+.+++.+||..+|.+||++.+++.|+|+..
T Consensus 235 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 235 --SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred --CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 11233456899999999999999999999999999874
No 283
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.5e-35 Score=303.09 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=201.3
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||+|+||.||+|.. .+..|++|++...... ....+..|+.+++.++||||+++++.+.+ ..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 488899999999999999987 4567999998776543 45678999999999999999999998744 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++... ..+++..+..|+.+++.||.|||+.+ |+|+||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~ 154 (264)
T cd06626 81 CSGGTLEELLEHG---RILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTT 154 (264)
T ss_pred CCCCcHHHHHhhc---CCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCCC
Confidence 9999999988543 34788899999999999999999999 99999999999999999999999999987643321
Q ss_pred cccccccccccccCCCccCcccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHHcCccccccCccCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGM---LGVKSDLYSLGVVLLQLITARPAMGLSH-QVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDvwSlGvil~elltG~~pf~~~~-~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.. ........++..|++||++.... ++.++||||||+++|+|++|++||.... .......... ...+....
T Consensus 155 ~~--~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~---~~~~~~~~ 229 (264)
T cd06626 155 TM--GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA---GHKPPIPD 229 (264)
T ss_pred cc--cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc---CCCCCCCc
Confidence 11 11022456889999999988766 8899999999999999999999996442 2221111111 11111111
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+ ......+.+++.+||+.+|.+||++.+++.|+|.
T Consensus 230 ~-~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 230 S-LQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred c-cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 1 1224568899999999999999999999999873
No 284
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.6e-35 Score=312.50 Aligned_cols=255 Identities=24% Similarity=0.307 Sum_probs=197.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceec----CCCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACP----EYGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~----~~~~lV 465 (701)
++|.+.+.||.|+||.||+|.+. ++.+++|.+...... ....+.+|+.++.+++||||+++++++. ...|+|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999985 566999988755322 2335778999999999999999999873 456899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+. ++|.+++.... ..+++..+..++.||+.||.|||+.+ |+|+||||+|||++.++.+||+|||++..+..
T Consensus 85 ~e~~~-~~L~~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 85 MEYVE-HDLKSLMETMK--QPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred ehhcC-cCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 99996 58988875433 36899999999999999999999999 99999999999999999999999999986643
Q ss_pred CCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--c-----------
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--N----------- 611 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~----------- 611 (701)
.. .......+++.|+|||.+.+. .++.++|+||||+++|+|++|++||.........-. .
T Consensus 159 ~~------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 159 PL------KPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred Cc------cccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 21 112345678899999987654 468999999999999999999999975543211100 0
Q ss_pred ----------CccccccCcc-CCCCCHH-HHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 612 ----------GTFSELLDPT-VTGWPVE-AALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 612 ----------~~~~~~ld~~-~~~~p~~-~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..+....... ...++.. ....+.+++.+||+.+|++||++.+++.|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence 0000000000 0111211 34568899999999999999999999999885
No 285
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.2e-35 Score=304.67 Aligned_cols=246 Identities=27% Similarity=0.467 Sum_probs=197.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceEEeec
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLVYEYM 469 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~ 469 (701)
..+.|.+.++||+|+||.||+|.+. +..+++|.+.... .....+.+|+.+++.++|+||+++++.+.+ ..+++|||+
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~ 82 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM 82 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeC
Confidence 3467999999999999999999874 4569999887542 335678999999999999999999998755 347999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++.... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++..+.....
T Consensus 83 ~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 83 AKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 9999999986532 346788999999999999999999998 99999999999999999999999999976543211
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p 626 (701)
.......++..|+|||++..+.++.++|+|||||++|+|+| |++||..... ....+..+... + .+
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----~----~~ 225 (260)
T cd05073 158 ----TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----P----RP 225 (260)
T ss_pred ----ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----C----Cc
Confidence 11123345678999999998889999999999999999999 9999975443 23333332111 1 11
Q ss_pred HHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 627 VEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
...+..+.+++.+||..+|++||++.+++
T Consensus 226 ~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~ 254 (260)
T cd05073 226 ENCPEELYNIMMRCWKNRPEERPTFEYIQ 254 (260)
T ss_pred ccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence 23344689999999999999999998876
No 286
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-35 Score=310.81 Aligned_cols=246 Identities=25% Similarity=0.413 Sum_probs=193.1
Q ss_pred CceeeeeeeecCceeEEEEEEC------CceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC----CCc
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD------HTSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE----YGC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~------~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~ 463 (701)
.|.+++.||+|+||.||++.+. +..||+|.+..... .....+.+|+.+++.++|||++++++++.+ ..+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 4788999999999999999852 44599999875532 234568999999999999999999998854 347
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+++++|.+++.+.. ..+++..+..++.|++.||.|||+++ |+||||||+|||++.++.+||+|||+++.+
T Consensus 85 lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK--NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 159 (284)
T ss_pred EEEEccCCCCHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCcccccc
Confidence 9999999999999885432 35899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-----------------HH
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-----------------VE 606 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~-----------------~~ 606 (701)
...... ........++..|+|||++.+..++.++|||||||++|+|+|+..|+..... ..
T Consensus 160 ~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 160 ETDKEY---YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred ccCccc---eeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 432211 0111245577889999999888899999999999999999998866432111 00
Q ss_pred HHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 607 QAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 607 ~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+..+.. ...+...+..+.+|+.+||+.+|.+||++.+++.
T Consensus 237 ~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 278 (284)
T cd05079 237 RVLEEGKR--------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE 278 (284)
T ss_pred HHHHcCcc--------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 11111111 1112234456999999999999999999999974
No 287
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-36 Score=320.63 Aligned_cols=258 Identities=28% Similarity=0.465 Sum_probs=207.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC-ceEEEEEeCCCCCCCh-HHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH-TSVAIKVLGPDISQGP-RQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYE 467 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~~~~-~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~E 467 (701)
..+...+.++||+|-||.|.++...+ ..||+|+++.+..... ..|.+|+++|.+|+|||||.|+|+| .+..|+|+|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 45567888999999999999999977 7899999999886665 6799999999999999999999999 556699999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
||++|+|..+|..+... .+.-....+|+.||+.|++||.+.+ +|||||-+.|+|++.++++||+|||+++-+-...
T Consensus 616 YmEnGDLnqFl~aheap-t~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP-TAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HHhcCcHHHHHHhccCc-ccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999999776432 2444556779999999999999999 9999999999999999999999999998542221
Q ss_pred Cccccccc-ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh--CCCCCCCchHHHHHHH-cCc-cccccCccC
Q 005343 548 ADTITQYH-MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT--ARPAMGLSHQVEQAIR-NGT-FSELLDPTV 622 (701)
Q Consensus 548 ~~~~~~~~-~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt--G~~pf~~~~~~~~~i~-~~~-~~~~ld~~~ 622 (701)
.|+ -...+-.+.|||||.+..++++.++|||+||+++||+++ ...||+...+ ++.++ .+. +..-.....
T Consensus 692 -----yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~-e~vven~~~~~~~~~~~~~ 765 (807)
T KOG1094|consen 692 -----YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD-EQVVENAGEFFRDQGRQVV 765 (807)
T ss_pred -----ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH-HHHHHhhhhhcCCCCccee
Confidence 111 123455689999999999999999999999999999876 5578864332 22222 111 111122223
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
...|.-++..+.+++.+||..+-.+||++.++.++..
T Consensus 766 l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 766 LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 4567778888999999999999999999999976543
No 288
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3e-35 Score=312.60 Aligned_cols=250 Identities=24% Similarity=0.362 Sum_probs=197.5
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC-
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE- 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~- 460 (701)
...++|.+.+.||+|+||.||+|... ...||+|++...... ....+.+|+.+++++ +||||++++++|..
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 34567999999999999999999752 225999988765322 234689999999999 79999999999854
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++||||+.+|+|.+++.... ...+++.++..++.|++.||.|||+.+ |+|+||||+|||++.++.+||+|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKR-ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCcc
Confidence 4589999999999999885433 234899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH---HHHHHHcCccc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ---VEQAIRNGTFS 615 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~---~~~~i~~~~~~ 615 (701)
++.+..... ........++..|+|||.+....++.++|||||||++|+|+| |++||..... ....+..+...
T Consensus 188 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 263 (302)
T cd05055 188 ARDIMNDSN----YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM 263 (302)
T ss_pred cccccCCCc----eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC
Confidence 986533211 011123456788999999999999999999999999999998 9999865432 22223322110
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+...+..+.+++.+||..+|++||++.+++.
T Consensus 264 --------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~ 296 (302)
T cd05055 264 --------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ 296 (302)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence 111223446899999999999999999999973
No 289
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=4.1e-35 Score=300.82 Aligned_cols=251 Identities=24% Similarity=0.364 Sum_probs=205.6
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecCC----CceEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPEY----GCLVY 466 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~----~~lV~ 466 (701)
+|...+.||+|+||.||+|... ++.|++|++..... .....+.+|+.++++++||||+++++.+.+. .++||
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4788899999999999999985 66799999876543 2356789999999999999999999998554 47999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++++|.+++.... .+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||.+......
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 154 (260)
T cd06606 81 EYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGDI 154 (260)
T ss_pred EecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEecccc
Confidence 9999999999985433 7899999999999999999999998 999999999999999999999999999876443
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH-HHHHHHcCccccccCccCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ-VEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~-~~~~i~~~~~~~~ld~~~~~~ 625 (701)
... .......++..|++||.+....++.++||||||+++|+|++|..||..... ......... .......
T Consensus 155 ~~~----~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-----~~~~~~~ 225 (260)
T cd06606 155 ETG----EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS-----SGEPPEI 225 (260)
T ss_pred ccc----ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc-----cCCCcCC
Confidence 210 012345788999999999988899999999999999999999999976552 222222111 0111223
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
|...+..+.+++.+|+..+|.+||++.+++.|+|+
T Consensus 226 ~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 226 PEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred CcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 34445679999999999999999999999999884
No 290
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=323.68 Aligned_cols=244 Identities=27% Similarity=0.396 Sum_probs=197.6
Q ss_pred ceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChH---HHHHHHHHHHhCCCCcEEEEecee--cCCCceEEee
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPR---QFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEY 468 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~---~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey 468 (701)
|.-++.||-|+||-||-|++.. ..||||.+.....+..+ .+..|+..|.+++|||++.+-|.| ....+|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 6667889999999999999843 45999998877665543 488999999999999999999988 3345899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
| -||-.|++.-.. .++.+..+..|+.+.+.||.|||+.+ .||||||..||||+..|.|||+|||.|..+.|.
T Consensus 108 C-lGSAsDlleVhk--KplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-- 179 (948)
T KOG0577|consen 108 C-LGSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-- 179 (948)
T ss_pred H-hccHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence 9 567777774333 46888899999999999999999999 999999999999999999999999999877553
Q ss_pred cccccccccccccCCCccCcccc---cCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQ---QTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~---~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
.+++|||+|||||++ ..|.|+-++|||||||+..||.-.+||+=.-+-+...+. +.+.-.|.+.
T Consensus 180 --------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYH---IAQNesPtLq-- 246 (948)
T KOG0577|consen 180 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNESPTLQ-- 246 (948)
T ss_pred --------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHH---HHhcCCCCCC--
Confidence 568999999999975 467899999999999999999999998644443322221 1111223332
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..+.+..|.+|+..||+.-|.+|||..+++.|.|.
T Consensus 247 s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv 281 (948)
T KOG0577|consen 247 SNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFV 281 (948)
T ss_pred CchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchh
Confidence 12345569999999999999999999999977653
No 291
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=3.3e-35 Score=306.47 Aligned_cols=239 Identities=28% Similarity=0.438 Sum_probs=186.5
Q ss_pred eeeeecCceeEEEEEECCc----eEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecCC--CceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQLDHT----SVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPEY--GCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~----~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~~lV~Ey~~~ 471 (701)
+.||+|+||.||+|.+.++ .+++|.+..... .....+.+|++++.++ +||||++++++|... .++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 3689999999999998543 368888765432 2345688999999999 899999999998543 4899999999
Q ss_pred CChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 472 GSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 472 gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+|||++.++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 99999986432 1235889999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCccc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTFS 615 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~~ 615 (701)
++...... ........+..|+|||++....++.++|||||||++|+|++ |.+||...... ...+..+..
T Consensus 158 l~~~~~~~-------~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~- 229 (270)
T cd05047 158 LSRGQEVY-------VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR- 229 (270)
T ss_pred Cccccchh-------hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCC-
Confidence 98632111 01112234667999999988899999999999999999997 99999644321 122222111
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...+...+..+.+++.+||..+|.+||++.+++.
T Consensus 230 -------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 263 (270)
T cd05047 230 -------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV 263 (270)
T ss_pred -------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence 0112233446899999999999999999999974
No 292
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-35 Score=309.55 Aligned_cols=232 Identities=22% Similarity=0.379 Sum_probs=180.8
Q ss_pred eeeecCceeEEEEEEC--------------------------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEE
Q 005343 401 KIGEGGYGPVYKAQLD--------------------------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVIL 454 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~--------------------------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l 454 (701)
+||+|+||.||+|.+. ...|++|++..........|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 6999999999999741 12388998866543334568899999999999999999
Q ss_pred eceecC--CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC--
Q 005343 455 LGACPE--YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-- 530 (701)
Q Consensus 455 ~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-- 530 (701)
+|+|.+ ..++||||+++|+|..++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE--KGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGLA 156 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCcc
Confidence 999854 458999999999999888543 245788999999999999999999998 99999999999997643
Q ss_pred -----cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHH-HhCCCCCCCch
Q 005343 531 -----VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQL-ITARPAMGLSH 603 (701)
Q Consensus 531 -----~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~el-ltG~~pf~~~~ 603 (701)
.+||+|||++..... .....++..|+|||++.+ ..++.++|||||||++||| ++|++||....
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~----------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~ 226 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALS----------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERT 226 (274)
T ss_pred cCccceeeecCCcccccccc----------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccC
Confidence 479999998764321 122357888999998865 5689999999999999999 47999986543
Q ss_pred HH--HHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 604 QV--EQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 604 ~~--~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.. ...+.... ..|......+.+++.+||+.+|.+||++.+|+.+
T Consensus 227 ~~~~~~~~~~~~----------~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~ 272 (274)
T cd05076 227 PSEKERFYEKKH----------RLPEPSCKELATLISQCLTYEPTQRPSFRTILRD 272 (274)
T ss_pred hHHHHHHHHhcc----------CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence 22 11111110 0111112358999999999999999999999854
No 293
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.2e-35 Score=315.11 Aligned_cols=256 Identities=24% Similarity=0.380 Sum_probs=199.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC---------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEeceecC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH---------TSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGACPE 460 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~---------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 460 (701)
...+|.+.+.||+|+||.||+|++.+ ..||+|++...... ....+.+|+.++.++ +||||++++++|.+
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 89 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 89 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence 34568999999999999999997521 25899988754322 345789999999999 89999999999854
Q ss_pred C--CceEEeecCCCChhhHhcccC-------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 005343 461 Y--GCLVYEYMENGSLEDRLFQKD-------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANIL 525 (701)
Q Consensus 461 ~--~~lV~Ey~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NIL 525 (701)
. .+++|||+++|+|.+++.... ....+++..+..++.|++.||.|||+++ |+||||||+|||
T Consensus 90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 166 (334)
T cd05100 90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVL 166 (334)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEE
Confidence 3 489999999999999986532 1235788999999999999999999999 999999999999
Q ss_pred EcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH
Q 005343 526 LDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ 604 (701)
Q Consensus 526 l~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 604 (701)
++.++.+||+|||+++.+..... ........++..|+|||.+....++.++|||||||++|||++ |.+||.....
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~ 242 (334)
T cd05100 167 VTEDNVMKIADFGLARDVHNIDY----YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV 242 (334)
T ss_pred EcCCCcEEECCcccceecccccc----cccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH
Confidence 99999999999999986532211 011122344578999999999999999999999999999998 8899865432
Q ss_pred --HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 605 --VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 605 --~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
....+..+.. ...+...+..+.+++.+||..+|.+||++.+++.+ +.++.
T Consensus 243 ~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~-l~~~~ 294 (334)
T cd05100 243 EELFKLLKEGHR--------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED-LDRVL 294 (334)
T ss_pred HHHHHHHHcCCC--------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH-HHHHh
Confidence 2222222211 11222334568999999999999999999999854 44443
No 294
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.6e-35 Score=312.44 Aligned_cols=258 Identities=27% Similarity=0.312 Sum_probs=198.8
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEeceecC----CCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGACPE----YGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~l 464 (701)
.++|.+.+.||+|+||.||+|.+. +..||+|++....... ...+.+|+.++++++||||+++++++.+ ..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999984 5679999986543222 2346789999999999999999998743 3489
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+. ++|.+++.... ..+++..+..++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++..+.
T Consensus 86 v~e~~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~ 159 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTYG 159 (309)
T ss_pred EEecCC-CCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeecC
Confidence 999996 58888775432 46899999999999999999999999 9999999999999999999999999998764
Q ss_pred CCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH--Hc--Cccccc--
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI--RN--GTFSEL-- 617 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i--~~--~~~~~~-- 617 (701)
... .......++..|+|||.+.+ ..++.++|||||||++|+|++|++||.........- .. +.....
T Consensus 160 ~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 160 LPA------KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred Ccc------CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 321 11233456888999998765 558999999999999999999999997655432211 10 000000
Q ss_pred -------------cC-ccCCCCC---HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 618 -------------LD-PTVTGWP---VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 618 -------------ld-~~~~~~p---~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+. .....+. ......+.+++.+||..||++||++.+++.|+|++-
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 00 0000000 012456789999999999999999999999999974
No 295
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=4.8e-35 Score=306.53 Aligned_cols=251 Identities=25% Similarity=0.395 Sum_probs=198.8
Q ss_pred cCceeeeeeeecCceeEEEEEECC------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC-CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE-YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV 465 (701)
++|.+.+.||+|+||.||+|.+.. ..|++|.+...... ....+.+|+.+++.++||||++++++|.. ..++|
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v 86 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLI 86 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEE
Confidence 468899999999999999998732 24899988765432 23568899999999999999999999854 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++|+|.+++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.+..
T Consensus 87 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 87 TQLMPLGCLLDYVRNHK--DNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EecCCCCcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999985432 34899999999999999999999998 99999999999999999999999999987643
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~~ 622 (701)
... ........++..|++||.+....++.++|||||||++|||+| |++||.... .+...+..+..
T Consensus 162 ~~~----~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------- 229 (279)
T cd05057 162 DEK----EYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGER-------- 229 (279)
T ss_pred ccc----ceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCC--------
Confidence 221 111122334678999999988899999999999999999999 999997644 23333333221
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
...|..++..+.+++.+||..+|..||++.+++ ..+..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~-~~l~~~ 268 (279)
T cd05057 230 LPQPPICTIDVYMVLVKCWMIDAESRPTFKELI-NEFSKM 268 (279)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHH-HHHHHH
Confidence 111222334688999999999999999999975 445444
No 296
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4e-35 Score=311.06 Aligned_cols=260 Identities=27% Similarity=0.362 Sum_probs=195.7
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE-------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 460 (701)
.++|.+.++||+|+||.||+|... +..||||.+...... ....+.+|+.++++++||||++++++|..
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 457999999999999999999984 566999988654322 23356789999999999999999998732
Q ss_pred --CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 461 --YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 461 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
..++||||+. ++|.+.+.... ..+++..+..++.||+.||.|||+.+ ++|+||||+|||++.++.+||+|||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg 164 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADFG 164 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcCC
Confidence 2289999995 58887774332 35899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHc--Cc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRN--GT 613 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~--~~ 613 (701)
++..+....... ........++..|+|||++.+. .++.++||||||+++|+|+||++||...+.... .+.. +.
T Consensus 165 ~~~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T cd07865 165 LARAFSLSKNSK--PNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGS 242 (310)
T ss_pred CcccccCCcccC--CCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 998764322111 1122345678999999987654 478999999999999999999999976543211 1110 11
Q ss_pred cccccCccC-----------CC----------CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 FSELLDPTV-----------TG----------WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 ~~~~ld~~~-----------~~----------~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+.....+.. .. ++......+.+++.+||..+|.+||++.+++.|+|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 100000000 00 000112346799999999999999999999999885
No 297
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=4.3e-35 Score=305.05 Aligned_cols=244 Identities=27% Similarity=0.348 Sum_probs=182.4
Q ss_pred eeeecCceeEEEEEEC----CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCC
Q 005343 401 KIGEGGYGPVYKAQLD----HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGS 473 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~----~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 473 (701)
.||+|+||.||+|... ...+++|.+...... ....+.+|+.+++.++||||++++|.|.+ ..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 5899999999999752 234888877644322 23468899999999999999999999854 4589999999999
Q ss_pred hhhHhcccCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 474 LEDRLFQKDN--SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 474 L~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|.+++..... ...+++.....++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~--- 155 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY--- 155 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchh---
Confidence 9999865432 233567788899999999999999999 99999999999999999999999999875432210
Q ss_pred ccccccccccCCCccCccccc-------CCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHHcCccccccCc
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQ-------TGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV---EQAIRNGTFSELLDP 620 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~-------~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~---~~~i~~~~~~~~ld~ 620 (701)
........+++.|+|||++. ...++.++|||||||++|||++ |.+||...... ...+..+. ..+..+
T Consensus 156 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 233 (269)
T cd05042 156 -YITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD-IKLPKP 233 (269)
T ss_pred -eeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC-ccCCCC
Confidence 00113345677899999864 3457889999999999999999 78888654332 22222221 111122
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
.++...+..+.+++..|+ .+|.+||++.+|+.
T Consensus 234 ---~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 234 ---QLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred ---cccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 122233445778888888 59999999999873
No 298
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.8e-35 Score=304.91 Aligned_cols=246 Identities=25% Similarity=0.310 Sum_probs=184.8
Q ss_pred eeeeecCceeEEEEEECC----ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCC
Q 005343 400 RKIGEGGYGPVYKAQLDH----TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENG 472 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~----~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 472 (701)
+.||+|+||.||+|.+.+ ..+++|.+...... ....+.+|+.+++.++||||++++|.|.+ ..++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998643 34899988765432 23468899999999999999999999854 458999999999
Q ss_pred ChhhHhcccC--CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 473 SLEDRLFQKD--NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 473 sL~~~l~~~~--~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|.+++.... ....+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-- 155 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDY-- 155 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcce--
Confidence 9999986532 2234667788889999999999999999 99999999999999999999999999875432111
Q ss_pred cccccccccccCCCccCcccccCC-------CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHH--HHcCccccccCc
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTG-------MLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVEQA--IRNGTFSELLDP 620 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~--i~~~~~~~~ld~ 620 (701)
........|+..|+|||++... .++.++|||||||++|||++ |++||......+.. ...+......++
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 233 (269)
T cd05087 156 --YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKP 233 (269)
T ss_pred --eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCC
Confidence 0111234678889999987542 35789999999999999996 99999754432211 111111112222
Q ss_pred cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 621 TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 621 ~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
... ......+.+++.+|+ .+|.+||++.+|+.
T Consensus 234 ~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 234 RLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred ccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 211 122345788999998 68999999999973
No 299
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-36 Score=316.35 Aligned_cols=266 Identities=26% Similarity=0.369 Sum_probs=214.8
Q ss_pred cccccCHHHHHHh-hcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEE
Q 005343 380 RYRKYTIEEIEAA-TDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVI 453 (701)
Q Consensus 380 ~~~~~~~~ei~~~-~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~ 453 (701)
+|..+.+-|.... .+.|+.-+.||+||||.||-++...| .+|+|.+.+.- ........+|-.||.+++.|.||.
T Consensus 170 rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVs 249 (591)
T KOG0986|consen 170 RFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVS 249 (591)
T ss_pred HHHHHHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEE
Confidence 3334444444333 35789999999999999999987555 48998775432 123344688999999999999999
Q ss_pred Eecee--cCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc
Q 005343 454 LLGAC--PEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV 531 (701)
Q Consensus 454 l~g~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~ 531 (701)
+--+| .+..||||..|+||+|.-.|+..+. +.|++.....++.+|+.||.+||+.+ ||+|||||+|||||+.|+
T Consensus 250 laYAfeTkd~LClVLtlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~Gh 325 (591)
T KOG0986|consen 250 LAYAFETKDALCLVLTLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGH 325 (591)
T ss_pred EeeeecCCCceEEEEEeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCC
Confidence 98777 5677999999999999988877654 78999999999999999999999999 999999999999999999
Q ss_pred EEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch------HH
Q 005343 532 SKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH------QV 605 (701)
Q Consensus 532 ~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~------~~ 605 (701)
++|+|+|||.-++... .....+||.+|||||+++++.|+...|+|||||+||||+.|+.||.... ++
T Consensus 326 vRISDLGLAvei~~g~-------~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEv 398 (591)
T KOG0986|consen 326 VRISDLGLAVEIPEGK-------PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEV 398 (591)
T ss_pred eEeeccceEEecCCCC-------ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHH
Confidence 9999999998875443 2355699999999999999999999999999999999999999996432 23
Q ss_pred HHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHHHhc
Q 005343 606 EQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRLRDL 665 (701)
Q Consensus 606 ~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l~~~ 665 (701)
++.+.+. -..+|...+.+...+....|+.||.+|.. ..+|-.|++|+--++
T Consensus 399 drr~~~~---------~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw 454 (591)
T KOG0986|consen 399 DRRTLED---------PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNW 454 (591)
T ss_pred HHHHhcc---------hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCH
Confidence 3333221 12345566667899999999999999875 568899999986443
No 300
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=4.6e-35 Score=303.40 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=197.6
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||.|+||.||+|... ++.|++|++...... ....+.+|+.+++.++||||+++++.+.+ ..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999996 677999998764422 34568999999999999999999998844 45899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++.+. ..+++..+..++.||+.||.|||+.+ ++|+||+|+||+++.++.+||+|||++..+....
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~------- 147 (262)
T cd05572 81 WTILRDR---GLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ------- 147 (262)
T ss_pred HHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-------
Confidence 9998543 34889999999999999999999999 9999999999999999999999999998764321
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
......|+..|++||.+....++.++|+||||+++|+|++|.+||.... ... ...... . .......|...+..
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~-~---~~~~~~~~~~~~~~ 222 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPME-IYNDIL-K---GNGKLEFPNYIDKA 222 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHH-HHHHHh-c---cCCCCCCCcccCHH
Confidence 1234578899999999988889999999999999999999999997655 211 111100 0 01112233333567
Q ss_pred HHHHHHHhhccCcCCCCC-----hhhhhhHHHHH
Q 005343 633 IAKLALQCCELRKRDRPD-----LVSVVLPELIR 661 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~ 661 (701)
+.+++.+||..+|.+||+ +.+++.|+|++
T Consensus 223 ~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 223 AKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred HHHHHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence 999999999999999999 99999999987
No 301
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=4.4e-35 Score=304.29 Aligned_cols=251 Identities=22% Similarity=0.354 Sum_probs=200.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-----CChHHHHHHHHHHHhCCCCcEEEEeceecCC----C
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-----QGPRQFKQEVEILGSMRHTNMVILLGACPEY----G 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~----~ 462 (701)
.+|.+.+.||+|+||.||+|.+. +..|++|.+..... .....+.+|+++++.++||||+++++.+.+. .
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47999999999999999999974 56699998754321 1234688999999999999999999987442 4
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+++++|.+++... ..+++.....++.|++.||.|||+.+ ++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAY---GALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECccccccc
Confidence 7899999999999988543 34788889999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccC
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~ 622 (701)
...... .........|+..|+|||++.+..++.++|+|||||++|+|++|++||.............. .+..
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-----~~~~ 227 (264)
T cd06653 156 IQTICM---SGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-----QPTK 227 (264)
T ss_pred cccccc---cCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-----CCCC
Confidence 532110 11112345689999999999888899999999999999999999999986654443332211 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
...|......+.+++.+||. +|..||+..+++.|+|
T Consensus 228 ~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 228 PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 22344555679999999999 6899999999998875
No 302
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.8e-35 Score=318.76 Aligned_cols=263 Identities=22% Similarity=0.338 Sum_probs=201.2
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC------CC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE------YG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------~~ 462 (701)
.++|.+.+.||.|+||.||+|... +..|++|++..... .....+.+|+.+|+.++||||++++++|.. ..
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367999999999999999999974 56699999876432 234567889999999999999999987732 34
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~~~ 156 (334)
T cd07855 84 YVVMDLME-SDLHHIIHS---DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMARG 156 (334)
T ss_pred EEEEehhh-hhHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEeccccccee
Confidence 79999995 688888743 234899999999999999999999999 99999999999999999999999999976
Q ss_pred cCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---H-cCc----
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---R-NGT---- 613 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~-~~~---- 613 (701)
+...... .........|+..|+|||++.. ..++.++|||||||++|+|++|++||.......... . .|.
T Consensus 157 ~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 157 LSSSPTE--HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred ecccCcC--CCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 5332211 1112245578999999998765 458999999999999999999999996554321110 0 000
Q ss_pred ---------cccccC--ccCCC--C---CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 614 ---------FSELLD--PTVTG--W---PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 614 ---------~~~~ld--~~~~~--~---p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+....+ +.... | ....+..+.+++.+||+.+|.+||++.+++.|+|+.-+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~ 301 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH 301 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence 000000 00001 1 112345689999999999999999999999999997433
No 303
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.8e-35 Score=311.91 Aligned_cols=265 Identities=18% Similarity=0.207 Sum_probs=199.6
Q ss_pred ceeeeeeeecCceeEEEEEECCceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
|.+.+.+|.|+++.||++...++.||+|++.... ......+.+|+.+++.++||||+++++.+.+ ..+++|||+++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~ 83 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAY 83 (314)
T ss_pred hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCC
Confidence 3345556667777777777778889999987652 2334579999999999999999999998844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc-c
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD-T 550 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~-~ 550 (701)
|+|.+++.... ...+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||.+..+...... .
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 84 GSCEDLLKTHF-PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred CCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 99999886542 235888899999999999999999999 999999999999999999999999998755322110 0
Q ss_pred cccccccccccCCCccCcccccC--CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc--CccccccC-------
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQT--GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN--GTFSELLD------- 619 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~--~~~~~~ld------- 619 (701)
..........++..|+|||++.. ..++.++|||||||++|+|++|++||.........+.. +.....++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 01111234567889999998866 35889999999999999999999999765443332221 11111110
Q ss_pred -------------ccC-----CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 620 -------------PTV-----TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 620 -------------~~~-----~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+.. ...+......+.+++.+||..+|.+||++.+++.|+|++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence 000 011123345688999999999999999999999999988543
No 304
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9.6e-35 Score=303.20 Aligned_cols=249 Identities=26% Similarity=0.432 Sum_probs=198.0
Q ss_pred cCceeeeeeeecCceeEEEEEEC-------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCc
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGC 463 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~ 463 (701)
++|.+...||+|+||.||+|+.. ...|++|.+...... ....+.+|+.++.+++||||++++++|.+ ..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56889999999999999999963 245999988654333 24568999999999999999999999855 458
Q ss_pred eEEeecCCCChhhHhcccCCC------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 464 LVYEYMENGSLEDRLFQKDNS------PPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
+||||+++|+|.+++...... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999998654322 26899999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCcc
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTF 614 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~ 614 (701)
|++...... .........++..|++||.+.+..++.++||||||+++|+|++ |..||..... ....+..+.+
T Consensus 162 ~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~ 236 (275)
T cd05046 162 SLSKDVYNS-----EYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKL 236 (275)
T ss_pred ccccccCcc-----cccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCc
Confidence 998754321 1112334466788999999988889999999999999999999 7888864332 2222222222
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.. + .+...+..+.+++.+||..+|.+||++.+++..
T Consensus 237 ~~---~----~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~ 272 (275)
T cd05046 237 EL---P----VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA 272 (275)
T ss_pred CC---C----CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence 11 1 112233468999999999999999999998753
No 305
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=321.96 Aligned_cols=246 Identities=25% Similarity=0.426 Sum_probs=204.7
Q ss_pred cCceeeeeeeecCceeEEEEEECC----c--eEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecCCC-ceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH----T--SVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPEYG-CLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~----~--~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~-~lV 465 (701)
+...+.++||+|-||.||+|.+.. . .||||..+.+.. ++.+.|.+|.-+|+.++|||||+|+|+|.+.. ++|
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~Wiv 468 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIV 468 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEE
Confidence 344566789999999999998722 2 399999988653 44667999999999999999999999997765 899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+++-|.|..+|..+. ..|+......++.||+.||.|||+.+ +|||||-..|||+.....+||+||||++++..
T Consensus 469 mEL~~~GELr~yLq~nk--~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 469 MELAPLGELREYLQQNK--DSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EecccchhHHHHHHhcc--ccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999997654 45788888899999999999999999 99999999999999999999999999999865
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~~ 622 (701)
+. .|+.+...-..-|||||-+.-..++.++|||-|||++||+|. |..||.+-. ++--.+++| ..
T Consensus 544 ~~-----yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnG--------eR 610 (974)
T KOG4257|consen 544 DA-----YYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENG--------ER 610 (974)
T ss_pred cc-----hhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCC--------CC
Confidence 42 334444445678999999999999999999999999999986 888886432 222223333 23
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
...|..|+..|..|..+||+.+|.+||.+.++...
T Consensus 611 lP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ 645 (974)
T KOG4257|consen 611 LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAI 645 (974)
T ss_pred CCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHH
Confidence 45678888899999999999999999999888643
No 306
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=4.2e-35 Score=306.56 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=192.1
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCC-CCcEEEEeceecCC----CceEEe
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMR-HTNMVILLGACPEY----GCLVYE 467 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~~----~~lV~E 467 (701)
|.+.+.||+|+||.||+|.. .++.||+|.+...... ......+|+.++.++. |||++++++++.+. .++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 67889999999999999998 4567999998765322 2234567999999885 99999999998543 489999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+. |+|.+.+.... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++. +.+||+|||+++.+....
T Consensus 81 ~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~ 153 (282)
T cd07831 81 LMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSKP 153 (282)
T ss_pred cCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccCC
Confidence 996 57877774432 46899999999999999999999999 999999999999999 999999999998764321
Q ss_pred CcccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cc---------
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GT--------- 613 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~--------- 613 (701)
......++..|+|||++. .+.++.++|||||||++|+|++|++||...+..+..... +.
T Consensus 154 -------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 154 -------PYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred -------CcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 112346789999999764 456789999999999999999999999765432211100 00
Q ss_pred ----cccccCccCC-----CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 614 ----FSELLDPTVT-----GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 614 ----~~~~ld~~~~-----~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
......+... ......+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence 0000000000 0011335679999999999999999999999999874
No 307
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.1e-35 Score=307.85 Aligned_cols=233 Identities=23% Similarity=0.385 Sum_probs=183.5
Q ss_pred eeeeecCceeEEEEEECC---------ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 400 RKIGEGGYGPVYKAQLDH---------TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~---------~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
+.||.|+||.||+|.... ..|++|.+........+.+..|+.+++.++||||+++++++. +..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998732 238888876544344567889999999999999999999984 456899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc--------EEEEeeccc
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV--------SKISDVGLA 540 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~--------~KL~DFGla 540 (701)
+++|+|..++.... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++. +|++|||++
T Consensus 81 ~~~g~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 81 VKFGSLDTYLKKNK--NLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred CCCCcHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEecccccc
Confidence 99999999986543 35889999999999999999999999 999999999999987664 699999988
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCC-CCCCCchHHHHH-HHcCccccc
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITAR-PAMGLSHQVEQA-IRNGTFSEL 617 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~-~pf~~~~~~~~~-i~~~~~~~~ 617 (701)
....+ .....+++.|+|||++.+ ..++.++|||||||++|+|++|. +||......... +....
T Consensus 156 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~---- 221 (258)
T cd05078 156 ITVLP----------KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFYEDR---- 221 (258)
T ss_pred cccCC----------chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHHHcc----
Confidence 65422 123467889999998876 45899999999999999999995 676544332211 11111
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...|......+.+++.+||+.+|.+||++.+++.
T Consensus 222 -----~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 222 -----HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred -----ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 1122222346899999999999999999999874
No 308
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.8e-35 Score=304.26 Aligned_cols=242 Identities=26% Similarity=0.415 Sum_probs=190.7
Q ss_pred eeeeecCceeEEEEEECC--------ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 400 RKIGEGGYGPVYKAQLDH--------TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--------~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+.||+|+||.||+|.+.+ ..+++|.+..... .....+.+|+.+++.++||||++++++|.+ ..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998743 3589998765432 335678999999999999999999999844 45899999
Q ss_pred cCCCChhhHhcccC----CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-----cEEEEeecc
Q 005343 469 MENGSLEDRLFQKD----NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-----VSKISDVGL 539 (701)
Q Consensus 469 ~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-----~~KL~DFGl 539 (701)
+++|+|.+++.... ....+++..+..++.|++.||.|||+.+ ++|+||||+|||++.++ .+||+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 99999999986432 2345789999999999999999999999 99999999999999877 899999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHHH--HHHHcCcccc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVE--QAIRNGTFSE 616 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~--~~i~~~~~~~ 616 (701)
++.+..... ........++..|+|||++.++.++.++|||||||++|+|+| |+.||....... ..+..+.
T Consensus 158 ~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--- 230 (269)
T cd05044 158 ARDIYKSDY----YRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG--- 230 (269)
T ss_pred ccccccccc----cccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC---
Confidence 976532211 011123355788999999999999999999999999999998 999986544322 1222111
Q ss_pred ccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 617 LLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 617 ~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
....+...+..+.+++.+||..+|.+||++.+++.
T Consensus 231 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 265 (269)
T cd05044 231 -----RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE 265 (269)
T ss_pred -----ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 11122334567899999999999999999999863
No 309
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=8.4e-35 Score=299.46 Aligned_cols=244 Identities=32% Similarity=0.501 Sum_probs=196.7
Q ss_pred ceeeeeeeecCceeEEEEEECC------ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEE
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH------TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~------~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 466 (701)
|.+.+.||.|+||.||++.+.. ..||+|++...... ....+..|+.++..++||||+++++.+.+ ..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567889999999999999854 66999999766543 45679999999999999999999999855 458999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||+++++|.+++..... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP-KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhh-ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceecccc
Confidence 99999999998854332 12899999999999999999999999 999999999999999999999999999876433
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~ 623 (701)
.. +......+++.|+|||.+.+..++.++||||||+++|+|++ |++||..... ....+..+...
T Consensus 157 ~~-----~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~-------- 223 (258)
T smart00219 157 DY-----YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRL-------- 223 (258)
T ss_pred cc-----cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC--------
Confidence 11 11112337789999999988889999999999999999998 8899875432 22233333211
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
..+...+..+.+++.+||..+|.+||++.+++.
T Consensus 224 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 224 PKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred CCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 112224556899999999999999999999873
No 310
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=3.4e-35 Score=307.51 Aligned_cols=247 Identities=26% Similarity=0.361 Sum_probs=196.7
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~gsL 474 (701)
||+|+||.||+|... +..|++|++..... .....+..|+++++.++||||+++++.+. +..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999874 56799998865421 22345678999999999999999998874 345899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++..... ..+++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++..+....
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~------- 149 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK------- 149 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccCC-------
Confidence 998865432 46899999999999999999999999 9999999999999999999999999987653311
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
......++..|++||++.++.++.++|||||||++|+|++|+.||..... ....+...... .....+...+..
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 224 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-----MAVEYPDKFSPE 224 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-----ccccCCccCCHH
Confidence 12345678899999999888899999999999999999999999965432 11112222111 111222334556
Q ss_pred HHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHh
Q 005343 633 IAKLALQCCELRKRDRP-----DLVSVVLPELIRLRD 664 (701)
Q Consensus 633 l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~ 664 (701)
+.+++.+||+.+|.+|| ++.+++.|+|+.-.+
T Consensus 225 ~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 225 AKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 89999999999999999 777899999997433
No 311
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=7e-35 Score=315.50 Aligned_cols=257 Identities=22% Similarity=0.273 Sum_probs=200.1
Q ss_pred HHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC-----
Q 005343 390 EAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE----- 460 (701)
Q Consensus 390 ~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----- 460 (701)
....++|.+.+.||+|+||.||+|.. .+..||||++...... ....+.+|+.+|+.++||||+++++++..
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD 90 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence 34577899999999999999999987 4567999998654322 23458899999999999999999998743
Q ss_pred ---CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 461 ---YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 461 ---~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
..++||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 91 ~~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 91 RFHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred ccceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeec
Confidence 237999999 7899887732 35889999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH---c-C
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---N-G 612 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---~-~ 612 (701)
|++...... .....+++.|++||.+.+ ..++.++|+|||||++|+|++|++||........... . +
T Consensus 163 g~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~ 233 (343)
T cd07880 163 GLARQTDSE---------MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTG 233 (343)
T ss_pred ccccccccC---------ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence 999865321 123467899999998766 4588999999999999999999999976543222111 0 0
Q ss_pred cc--------------------ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 613 TF--------------------SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 613 ~~--------------------~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
.. ..........+.......+.+++.+|+..+|.+||++.+++.|+|++-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~ 304 (343)
T cd07880 234 TPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF 304 (343)
T ss_pred CCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence 00 0000000001111233458899999999999999999999999999864
No 312
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.1e-35 Score=315.74 Aligned_cols=263 Identities=22% Similarity=0.287 Sum_probs=202.1
Q ss_pred cccCHHHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEece
Q 005343 382 RKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGA 457 (701)
Q Consensus 382 ~~~~~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~ 457 (701)
+.+...++...+++|.+.+.||+|+||.||+|.. .+..||+|++...... ....+.+|+.++.+++||||++++++
T Consensus 5 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~ 84 (345)
T cd07877 5 RQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 84 (345)
T ss_pred hhhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeee
Confidence 3444566777889999999999999999999987 4566999998754322 23567889999999999999999988
Q ss_pred ecC--------CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC
Q 005343 458 CPE--------YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN 529 (701)
Q Consensus 458 ~~~--------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~ 529 (701)
+.. ..+++++++ +++|.+.+.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.+
T Consensus 85 ~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~ 156 (345)
T cd07877 85 FTPARSLEEFNDVYLVTHLM-GADLNNIVKC----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNED 156 (345)
T ss_pred eeecccccccccEEEEehhc-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCC
Confidence 732 236788877 8899887732 24889999999999999999999999 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--
Q 005343 530 YVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE-- 606 (701)
Q Consensus 530 ~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~-- 606 (701)
+.+||+|||+++..... .....|+..|+|||.+.+ ..++.++|||||||++|+|++|++||...+...
T Consensus 157 ~~~kl~dfg~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~ 227 (345)
T cd07877 157 CELKILDFGLARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 227 (345)
T ss_pred CCEEEeccccccccccc---------ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 99999999998764221 234568899999998766 568899999999999999999999996543221
Q ss_pred -HHHH-cCcc--------------------ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 607 -QAIR-NGTF--------------------SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 607 -~~i~-~~~~--------------------~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.... .+.. ..................+.+++.+||..+|.+||++.+++.|+|++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~ 304 (345)
T cd07877 228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFA 304 (345)
T ss_pred HHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhh
Confidence 1111 0000 00000000000011234578999999999999999999999999987
No 313
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3.2e-35 Score=317.25 Aligned_cols=257 Identities=23% Similarity=0.292 Sum_probs=199.0
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC-------C
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE-------Y 461 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~ 461 (701)
.+.|.+.+.||+|+||.||+|... ++.||||.+.... ......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 457999999999999999999984 5679999887542 2234567889999999999999999998742 2
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
.|+||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+++
T Consensus 84 ~~lv~e~~~-~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~ 156 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS---SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGLAR 156 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcccc
Confidence 489999995 788887743 246899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HH-------
Q 005343 542 LVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IR------- 610 (701)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~------- 610 (701)
...... .......++..|+|||.+.. ..++.++|||||||++|+|++|++||...+..... ..
T Consensus 157 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 230 (337)
T cd07858 157 TTSEKG------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSE 230 (337)
T ss_pred ccCCCc------ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 764321 11234567899999998765 56899999999999999999999999755321110 00
Q ss_pred -------cCccc-------cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 611 -------NGTFS-------ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 611 -------~~~~~-------~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+... ....+.........+..+.+++.+||+.+|.+||++.+++.|+|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 231 EDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred HHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 00000 00000001111233456899999999999999999999999999874
No 314
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=6.9e-35 Score=304.15 Aligned_cols=242 Identities=18% Similarity=0.266 Sum_probs=188.9
Q ss_pred hhcCceeeeee--eecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceec--CCCce
Q 005343 392 ATDYFSISRKI--GEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACP--EYGCL 464 (701)
Q Consensus 392 ~~~~f~~~~~I--G~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~--~~~~l 464 (701)
..++|.+.+.+ |.|+||.||++... +..+++|++....... .|+.....+ +||||+++++.|. +..++
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~~~~~~~i 86 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVTTLKGHVL 86 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEecCCeeEE
Confidence 34566666666 99999999999974 4569999886543221 122222222 7999999999883 45589
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-cEEEEeecccccc
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARLV 543 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~~ 543 (701)
||||+++|+|.+++... .++++..+..++.|++.||.|||+.+ ++||||||+||+++.++ .++|+|||++...
T Consensus 87 v~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~ 160 (267)
T PHA03390 87 IMDYIKDGDLFDLLKKE---GKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDYGLCKII 160 (267)
T ss_pred EEEcCCCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecCccceec
Confidence 99999999999988543 27899999999999999999999999 99999999999999988 9999999998765
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH----HHHHHcCccccccC
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV----EQAIRNGTFSELLD 619 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~----~~~i~~~~~~~~ld 619 (701)
... ....|+..|+|||++.+..++.++|||||||++|+|++|+.||...... ....... .
T Consensus 161 ~~~----------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~---- 224 (267)
T PHA03390 161 GTP----------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ--Q---- 224 (267)
T ss_pred CCC----------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh--c----
Confidence 322 2346889999999999989999999999999999999999999744221 1111111 0
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCC-hhhhhhHHHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPD-LVSVVLPELIR 661 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt-~~~vl~~~~~~ 661 (701)
.. ...+...+..+.+++.+||+.+|.+||+ +.+++.|+|++
T Consensus 225 ~~-~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 225 KK-LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK 266 (267)
T ss_pred cc-CCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence 11 1122244556899999999999999996 69999999975
No 315
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.5e-36 Score=299.63 Aligned_cols=260 Identities=25% Similarity=0.314 Sum_probs=201.2
Q ss_pred cCceeeeeeeecCceeEEEEEECC------ceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC---CC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDH------TSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE---YG 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~------~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~ 462 (701)
..|+.+..||+|.||.||+|...+ ..+|||.++..... -.....+|+.+++.++|||++.|..+|-. ..
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 358889999999999999996522 25899998766422 23457899999999999999999988744 33
Q ss_pred ceEEeecCCCChhhHhccc--CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC----CcEEEEe
Q 005343 463 CLVYEYMENGSLEDRLFQK--DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN----YVSKISD 536 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~----~~~KL~D 536 (701)
+|++||.+. +|+..+.-+ .....++......|+.||+.|+.|||++. |+||||||+|||+..+ |.|||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 799999975 888877432 33457899999999999999999999999 9999999999999877 9999999
Q ss_pred eccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCch------------
Q 005343 537 VGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSH------------ 603 (701)
Q Consensus 537 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~------------ 603 (701)
||+++++..... ..+.....+.|+||+|||++.+ ..|++++|||++|||+.||||-.|.|.+..
T Consensus 180 lGlaR~~~~plk---pl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~d 256 (438)
T KOG0666|consen 180 LGLARLFNNPLK---PLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHD 256 (438)
T ss_pred ccHHHHhhcccc---ccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHH
Confidence 999999854321 2223456788999999998766 569999999999999999999998886432
Q ss_pred HHHHHHHcCccccccCccCCCCCH------H--------------------------HHHHHHHHHHHhhccCcCCCCCh
Q 005343 604 QVEQAIRNGTFSELLDPTVTGWPV------E--------------------------AALSIAKLALQCCELRKRDRPDL 651 (701)
Q Consensus 604 ~~~~~i~~~~~~~~ld~~~~~~p~------~--------------------------~~~~l~~li~~cl~~~P~~RPt~ 651 (701)
++.++++ -+..|....||. - .+....+|+..+|+.||..|.|.
T Consensus 257 Ql~rIf~-----vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta 331 (438)
T KOG0666|consen 257 QLDRIFE-----VLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITA 331 (438)
T ss_pred HHHHHHH-----HcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccH
Confidence 1222221 122222222321 0 01235689999999999999999
Q ss_pred hhhhhHHHHHHHhc
Q 005343 652 VSVVLPELIRLRDL 665 (701)
Q Consensus 652 ~~vl~~~~~~l~~~ 665 (701)
.+.++|.+|..-.+
T Consensus 332 ~qAleh~yF~~d~l 345 (438)
T KOG0666|consen 332 EQALEHPYFTEDPL 345 (438)
T ss_pred HHHhcccccccCCC
Confidence 99999999986443
No 316
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=7e-35 Score=314.39 Aligned_cols=268 Identities=24% Similarity=0.304 Sum_probs=202.4
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhC-CCCcEEEEeceecC----CC
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSM-RHTNMVILLGACPE----YG 462 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~----~~ 462 (701)
..++|.+.+.||+|+||.||+|.+. ++.+++|.+.... ......+.+|+.++.++ +||||++++++|.. ..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 3567889999999999999999984 5679999886432 22334577899999999 99999999998743 24
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+. ++|..++... .+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 89999996 5898877432 6788999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---Hc-Cc----
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---RN-GT---- 613 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~~-~~---- 613 (701)
+...... ..........||..|+|||++.. ..++.++|||||||++|+|+||++||.........- .. +.
T Consensus 157 ~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 157 LSELEEN-PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccc-ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6432211 01112334578999999997754 557899999999999999999999997544322110 00 00
Q ss_pred ---------cccccC----cc---CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccc
Q 005343 614 ---------FSELLD----PT---VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFE 668 (701)
Q Consensus 614 ---------~~~~ld----~~---~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~ 668 (701)
...+++ .. ........+..+.+++.+||+.+|.+||++.+++.|+|++......+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~~~~ 306 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNPSD 306 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhccCCC
Confidence 000000 00 00111113456899999999999999999999999999987554433
No 317
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.8e-35 Score=311.40 Aligned_cols=262 Identities=26% Similarity=0.323 Sum_probs=196.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE-------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 460 (701)
.++|.+.+.||+|+||.||+|.+. ++.|++|++...... ....+.+|+++++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999984 566999988654322 23457899999999999999999987632
Q ss_pred --CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 461 --YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 461 --~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
..++||||+. ++|...+... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg 160 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP--SVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADFG 160 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcCc
Confidence 2379999996 4676666432 346899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCccc-----ccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH---HH
Q 005343 539 LARLVPPSAADTI-----TQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ---AI 609 (701)
Q Consensus 539 la~~~~~~~~~~~-----~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~---~i 609 (701)
+++.......... .....+...|++.|+|||++.+ ..++.++|||||||++|+|++|++||...+.... .+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~ 240 (311)
T cd07866 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIF 240 (311)
T ss_pred cchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9986643221111 1112244577899999997755 4589999999999999999999999976543321 11
Q ss_pred Hc-Cc-----------cccccC-ccCCCCCH-------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 610 RN-GT-----------FSELLD-PTVTGWPV-------EAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 610 ~~-~~-----------~~~~ld-~~~~~~p~-------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.. +. .....+ ......+. .....+.+++.+||..+|.+||++.+++.|+|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence 10 00 000000 00000110 112458899999999999999999999999885
No 318
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.8e-36 Score=324.41 Aligned_cols=244 Identities=21% Similarity=0.361 Sum_probs=195.2
Q ss_pred eeeeeecCceeEEEEEECCceEEEE-----EeCCC-CCCChHHHHHHHHHHHhCCCCcEEEEeceecCC----CceEEee
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIK-----VLGPD-ISQGPRQFKQEVEILGSMRHTNMVILLGACPEY----GCLVYEY 468 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK-----~l~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~----~~lV~Ey 468 (701)
...||+|+|-+||+|.+..+++.|- +-... .....+.|..|+.+|+.|+|||||++|.+|.+. ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 3569999999999999977764442 11111 112346799999999999999999999998442 3589999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~~~~ 547 (701)
|..|+|..|+.+.. .+....+..|+.||+.||.|||++.| ||||||||.+||+|+. .|.|||+|+|||.....+.
T Consensus 125 ~TSGtLr~Y~kk~~---~vn~kaik~W~RQILkGL~yLHs~~P-PIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHR---RVNIKAIKSWCRQILKGLVYLHSQDP-PIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred ccCCcHHHHHHHhc---cCCHHHHHHHHHHHHHHhhhhhcCCC-CccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 99999999996654 46778999999999999999999885 8999999999999975 5999999999999875432
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHcCccccccCccCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH---QVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~ 624 (701)
....+|||.|||||+.. ..|+..+||||||++++||+|+..||.-=. ++...+-.|....-+...
T Consensus 201 --------aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV--- 268 (632)
T KOG0584|consen 201 --------AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKV--- 268 (632)
T ss_pred --------cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhcc---
Confidence 34579999999999877 789999999999999999999999995222 333333444432222111
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
..+++.+||.+|+.. ..+||++.++|.|+|+...
T Consensus 269 ----~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 269 ----KDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----CCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 123589999999999 9999999999999999874
No 319
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.5e-34 Score=297.41 Aligned_cols=240 Identities=28% Similarity=0.403 Sum_probs=191.1
Q ss_pred eeeeecCceeEEEEEEC-CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCChh
Q 005343 400 RKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSLE 475 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 475 (701)
++||.|+||.||++.+. ++.|++|.+...... ....+.+|+++++.++||||+.+++++.+ ..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 36999999999999985 677999988765433 34578999999999999999999999854 348999999999999
Q ss_pred hHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccccccc
Q 005343 476 DRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYH 555 (701)
Q Consensus 476 ~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~ 555 (701)
+++.... ..+++..+..++.+++.||.|||+++ ++||||||+|||++.++.+||+|||++........ ...
T Consensus 81 ~~l~~~~--~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~----~~~ 151 (251)
T cd05041 81 TFLRKKK--NRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY----TVS 151 (251)
T ss_pred HHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcc----eec
Confidence 9885432 35788999999999999999999999 99999999999999999999999999976532110 000
Q ss_pred ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchH--HHHHHHcCccccccCccCCCCCHHHHHH
Q 005343 556 MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 556 ~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
.....++..|+|||.+.++.++.++|||||||++|+|+| |.+||..... ....+..+. . ...|...+..
T Consensus 152 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~ 223 (251)
T cd05041 152 DGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY--R------MPAPQLCPEE 223 (251)
T ss_pred cccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC--C------CCCCccCCHH
Confidence 112234567999999998899999999999999999999 8899865442 222222211 0 0112334456
Q ss_pred HHHHHHHhhccCcCCCCChhhhhh
Q 005343 633 IAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
+.+++.+||..+|.+||++.+++.
T Consensus 224 ~~~li~~~l~~~p~~Rp~~~ell~ 247 (251)
T cd05041 224 IYRLMLQCWAYDPENRPSFSEIYN 247 (251)
T ss_pred HHHHHHHHhccChhhCcCHHHHHH
Confidence 999999999999999999999974
No 320
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=8.5e-35 Score=307.68 Aligned_cols=245 Identities=22% Similarity=0.317 Sum_probs=197.9
Q ss_pred eeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEeecCCCCh
Q 005343 399 SRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEYMENGSL 474 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey~~~gsL 474 (701)
..+||+|+||.||++.. .+..||||.+..........+.+|+.+++.++|||++++++.+ .+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 46799999999999988 4566999988655444455689999999999999999999987 4456899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++.. ..+++.....++.|++.||.|||+.+ ++||||+|+||+++.++.++|+|||++..+.... .
T Consensus 105 ~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~------~ 171 (292)
T cd06657 105 TDIVTH----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV------P 171 (292)
T ss_pred HHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceeccccc------c
Confidence 987732 35789999999999999999999999 9999999999999999999999999987653221 1
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
......|++.|++||++.+..++.++|+||||+++|+|++|.+||....... ..+..+. .+.... ....+..
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~-----~~~~~~-~~~~~~~ 245 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-----PPKLKN-LHKVSPS 245 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC-----CcccCC-cccCCHH
Confidence 1234568899999999988889999999999999999999999997654332 2222111 111111 1123345
Q ss_pred HHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 633 IAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.+++.+||..+|.+||++.+++.|+|+.-
T Consensus 246 l~~li~~~l~~~P~~R~~~~~ll~~~~~~~ 275 (292)
T cd06657 246 LKGFLDRLLVRDPAQRATAAELLKHPFLAK 275 (292)
T ss_pred HHHHHHHHHhCCcccCcCHHHHhcChHHhc
Confidence 889999999999999999999999999884
No 321
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=4.7e-35 Score=307.39 Aligned_cols=247 Identities=26% Similarity=0.298 Sum_probs=189.1
Q ss_pred eeeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHH---hCCCCcEEEEeceecC--CCceEEeecC
Q 005343 401 KIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILG---SMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~---~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
.||+|+||.||++... ++.||+|.+...... ....+.+|..++. ..+||||+.+++.+.. ..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999984 567999988654322 1223445544443 3479999999988743 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++.......
T Consensus 81 ~~~L~~~i~~~---~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~--- 151 (279)
T cd05633 81 GGDLHYHLSQH---GVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (279)
T ss_pred CCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC---
Confidence 99999888543 35899999999999999999999999 9999999999999999999999999987553211
Q ss_pred cccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-HHHHHcCccccccCccCCCCCHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQV-EQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~-~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.....||..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ...+...... .. ...|..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~---~~~~~~ 221 (279)
T cd05633 152 -----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--VN---VELPDS 221 (279)
T ss_pred -----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhc--CC---cCCccc
Confidence 123468999999998764 55899999999999999999999999643211 1111111110 11 112334
Q ss_pred HHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHhcc
Q 005343 629 AALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRDLG 666 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~~~ 666 (701)
.+..+.+++.+||..+|.+|| ++.+++.|+|++=.++.
T Consensus 222 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~ 264 (279)
T cd05633 222 FSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQ 264 (279)
T ss_pred cCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHh
Confidence 455789999999999999999 69999999999754443
No 322
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1e-34 Score=298.08 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=203.6
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||+|+||.||++... +..|++|.+..... .....+.+|++++.+++|||++++++++.+ ..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4788999999999999999884 56799999877653 234568999999999999999999998854 34799999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 154 (254)
T cd06627 81 AENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK 154 (254)
T ss_pred CCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCcc
Confidence 9999999988543 46899999999999999999999999 99999999999999999999999999987643321
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHH
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
......++..|++||...+..++.++||||||+++|+|++|++||.........+.... ......+..
T Consensus 155 ------~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~------~~~~~~~~~ 222 (254)
T cd06627 155 ------DDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ------DDHPPLPEG 222 (254)
T ss_pred ------cccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc------cCCCCCCCC
Confidence 12345688999999998888899999999999999999999999976554333332111 011122333
Q ss_pred HHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 629 AALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+..+.+++.+||..+|++||++.+++.|+|+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 223 ISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred CCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 45568999999999999999999999988774
No 323
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=304.58 Aligned_cols=253 Identities=25% Similarity=0.295 Sum_probs=205.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHH---HHHHHHHHHhCCCCcEEEEecee--cCCCceEE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQ---FKQEVEILGSMRHTNMVILLGAC--PEYGCLVY 466 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~---~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~ 466 (701)
++|..++.||+|.||.|.+++-+ ++.+|||+++++..-...+ -..|-.+|...+||.+..|--.| .+..|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 56888999999999999999885 4459999999876544433 46788999999999998887666 44569999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
||..||.|.-.|.+ ...|++.....+..+|+.||.|||+.+ ||.||||.+|+|||.+|++||+|||||+--
T Consensus 248 eyanGGeLf~HLsr---er~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~--- 318 (516)
T KOG0690|consen 248 EYANGGELFFHLSR---ERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEE--- 318 (516)
T ss_pred EEccCceEeeehhh---hhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhc---
Confidence 99999999877743 446788877789999999999999999 999999999999999999999999999742
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWP 626 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p 626 (701)
........+.|||+.|+|||++....|+..+|+|.+||++|||++|+.||...+. + .+.+++-..-..+|
T Consensus 319 ---I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh-~------kLFeLIl~ed~kFP 388 (516)
T KOG0690|consen 319 ---IKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH-E------KLFELILMEDLKFP 388 (516)
T ss_pred ---ccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch-h------HHHHHHHhhhccCC
Confidence 1222345789999999999999999999999999999999999999999965432 1 11112112222456
Q ss_pred HHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHhc
Q 005343 627 VEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRDL 665 (701)
Q Consensus 627 ~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~~ 665 (701)
.....+...|+...|..+|++|. ++.+|..|.|+.--++
T Consensus 389 r~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 389 RTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred ccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCH
Confidence 66666788999999999999996 4788999988876544
No 324
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1e-34 Score=314.06 Aligned_cols=253 Identities=22% Similarity=0.308 Sum_probs=195.6
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE-------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 460 (701)
.++|.+...||+|+||.||+|.+ .+..||+|++..... .....+.+|+.+++.++||||++++++|..
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 47899999999999999999997 456799999875432 223468899999999999999999998743
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..++|+||+. ++|...+ ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~lv~e~~~-~~l~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIM-----GHPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEecccc-cCHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 2379999995 4776654 135889999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHcC----
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRNG---- 612 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~~---- 612 (701)
+..... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..... +...
T Consensus 165 ~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 235 (342)
T cd07879 165 RHADAE---------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG 235 (342)
T ss_pred cCCCCC---------CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 764321 134467889999998766 46899999999999999999999999765432211 1100
Q ss_pred -------------cc----ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 613 -------------TF----SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 613 -------------~~----~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
.+ .......+..+.......+.+++.+||+.+|.+||++.+++.|+|++-.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 236 PEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 00 0000000000001123458899999999999999999999999998764
No 325
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.3e-34 Score=311.67 Aligned_cols=284 Identities=21% Similarity=0.270 Sum_probs=205.8
Q ss_pred CceeeeeeeecCceeEEEEEEC----CceEEEEEeCCCCCC--ChHHHHHHHHHHHhC-CCCcEEEEeceec------CC
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD----HTSVAIKVLGPDISQ--GPRQFKQEVEILGSM-RHTNMVILLGACP------EY 461 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~----~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l-~HpnIv~l~g~~~------~~ 461 (701)
+|.+.+.||+|+||.||++.+. +..||+|.+...... ....+.+|+.++.++ .||||+++++.+. ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4888999999999999999985 446999988654322 245678899999999 5999999998642 22
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
.+++++|+. ++|.+.+.. ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a~ 153 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS---GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLAR 153 (332)
T ss_pred EEEEEeccc-CCHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCce
Confidence 467888884 789888743 346889999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH---HHHH-cCc---
Q 005343 542 LVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE---QAIR-NGT--- 613 (701)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~---~~i~-~~~--- 613 (701)
.+...... .........||..|+|||++.+ ..++.++|||||||++|+|++|++||...+... ..+. .+.
T Consensus 154 ~~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 154 GFSENPGE--NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred eccccccc--ccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 76432211 1112244578999999998765 468999999999999999999999997544211 0000 000
Q ss_pred -----------------cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccccccCCCCC
Q 005343 614 -----------------FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDN 676 (701)
Q Consensus 614 -----------------~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~~~~~~~~ 676 (701)
+.......+..........+.+++.+||+.+|.+||++.+++.|+|.+....... ...-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~~~~~----~~~~ 307 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPDD----EPVC 307 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhcCccc----cccc
Confidence 0000000000000112346899999999999999999999999999864322111 1112
Q ss_pred cccCCCCCCChhhhh
Q 005343 677 IVVTPGPYNSVSEMK 691 (701)
Q Consensus 677 ~~~~~~~~~~~~~~~ 691 (701)
..+.+.+|++.+.|.
T Consensus 308 ~~~~~~~~~~~~~~~ 322 (332)
T cd07857 308 QKPFDFSFESEDSME 322 (332)
T ss_pred cccccCCccccccHH
Confidence 344555577666554
No 326
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=9.8e-35 Score=304.09 Aligned_cols=254 Identities=27% Similarity=0.365 Sum_probs=196.3
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecCC----CceEEe
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPEY----GCLVYE 467 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~----~~lV~E 467 (701)
|.+.+.||.|+||.||+|... ++.+++|.+.... ......+.+|+.+++.++|||++++++++.+. .++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 678899999999999999985 4679999998764 22345688999999999999999999998544 589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|++ ++|.+++.... ..+++..+..++.||+.||.|||+.+ ++|+||+|+|||++.++.+||+|||++.......
T Consensus 81 ~~~-~~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~ 154 (287)
T cd07840 81 YMD-HDLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKRN 154 (287)
T ss_pred ccc-ccHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCCC
Confidence 996 58888775432 46899999999999999999999999 9999999999999999999999999998764332
Q ss_pred CcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-C-----ccccc
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN-G-----TFSEL 617 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~-~-----~~~~~ 617 (701)
. .......++..|+|||.+.+ ..++.++||||||+++|+|+||++||......... ... + .+...
T Consensus 155 ~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 155 S-----ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGV 229 (287)
T ss_pred c-----ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcccc
Confidence 1 11234467889999997654 45799999999999999999999999765432211 110 0 00000
Q ss_pred --------cCccC------CCCCHH-HHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 618 --------LDPTV------TGWPVE-AALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 618 --------ld~~~------~~~p~~-~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..+.. ...... ++..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF 287 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence 00000 000001 14568999999999999999999999999874
No 327
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.3e-35 Score=308.82 Aligned_cols=259 Identities=26% Similarity=0.322 Sum_probs=198.2
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC------
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE------ 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------ 460 (701)
...++|.+.+.||+|+||.||+|.+. ++.|++|++..... .....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 35678999999999999999999984 56799999876532 223467889999999999999999998743
Q ss_pred ------CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEE
Q 005343 461 ------YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKI 534 (701)
Q Consensus 461 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL 534 (701)
..++|+||+++ +|.+.+... ...+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEEe
Confidence 34799999975 677766443 346899999999999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--c
Q 005343 535 SDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR--N 611 (701)
Q Consensus 535 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~--~ 611 (701)
+|||++..+..... .......++..|+|||.+.+ ..++.++|||||||++|+|++|++||........... .
T Consensus 158 ~dfg~~~~~~~~~~-----~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~ 232 (302)
T cd07864 158 ADFGLARLYNSEES-----RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISR 232 (302)
T ss_pred CcccccccccCCcc-----cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence 99999987643221 01123456788999997754 4578999999999999999999999976554322211 0
Q ss_pred ---Cc----cccc--------cCc------cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 612 ---GT----FSEL--------LDP------TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 612 ---~~----~~~~--------ld~------~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+. +..+ .++ .........+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 233 LCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence 00 0000 000 0000011124568999999999999999999999999874
No 328
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.6e-35 Score=336.14 Aligned_cols=262 Identities=18% Similarity=0.240 Sum_probs=186.8
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce---EEEEE--------------eCC---CCCCChHHHHHHHHHHHhCCCCcE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS---VAIKV--------------LGP---DISQGPRQFKQEVEILGSMRHTNM 451 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~---vAiK~--------------l~~---~~~~~~~~~~~Ei~il~~l~HpnI 451 (701)
..++|.+++.||+|+||.||+|.+.... +++|. +.+ ........+.+|+.+|..++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998763211 22121 000 011123457899999999999999
Q ss_pred EEEeceec--CCCceEEeecCCCChhhHhcccCC--CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc
Q 005343 452 VILLGACP--EYGCLVYEYMENGSLEDRLFQKDN--SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD 527 (701)
Q Consensus 452 v~l~g~~~--~~~~lV~Ey~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~ 527 (701)
+++++++. +..++|++++ +++|.+++..... ...........|+.||+.||.|||+.+ ||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEC
Confidence 99999984 3458999998 4677777644321 122345567789999999999999999 99999999999999
Q ss_pred CCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCC-CCCCCc--h-
Q 005343 528 QNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITAR-PAMGLS--H- 603 (701)
Q Consensus 528 ~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~-~pf~~~--~- 603 (701)
.++.+||+|||+++.+..... ......+||..|+|||++.+..++.++|||||||+||||++|. +|++.. .
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~ 376 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKERE-----AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKP 376 (501)
T ss_pred CCCCEEEEeCCCceecCcccc-----cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCH
Confidence 999999999999987643211 1123467999999999999999999999999999999999987 455322 1
Q ss_pred --HHHHHHHcCcc--ccccCc-----------cC----CCCCH-----HHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 604 --QVEQAIRNGTF--SELLDP-----------TV----TGWPV-----EAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 604 --~~~~~i~~~~~--~~~ld~-----------~~----~~~p~-----~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.....+..... ..+.+. .. ...+. ..+..+.+++.+||+.||.+||++.++|.|+|
T Consensus 377 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~ 456 (501)
T PHA03210 377 GKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPL 456 (501)
T ss_pred HHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChh
Confidence 11111110000 000000 00 00000 11234678899999999999999999999999
Q ss_pred HHH
Q 005343 660 IRL 662 (701)
Q Consensus 660 ~~l 662 (701)
+.-
T Consensus 457 f~~ 459 (501)
T PHA03210 457 FSA 459 (501)
T ss_pred hhc
Confidence 975
No 329
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.5e-35 Score=307.28 Aligned_cols=247 Identities=27% Similarity=0.456 Sum_probs=195.7
Q ss_pred cCceeeeeeeecCceeEEEEEEC------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC----CC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE----YG 462 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 462 (701)
..|.+.+.||+|+||.||+|.+. +..||+|++...... ....|.+|+++++.+.||||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35777899999999999999874 356999999766543 35679999999999999999999998854 45
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+++|+|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHR--DQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAKV 158 (284)
T ss_pred EEEEecCCCCCHHHHHHhCc--cccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccccccc
Confidence 89999999999999985433 35899999999999999999999999 99999999999999999999999999987
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-----------------
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV----------------- 605 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~----------------- 605 (701)
+...... ........++..|++||++.+..++.++||||||+++|+|+||+.|+......
T Consensus 159 ~~~~~~~---~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05038 159 LPEDKDY---YYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRL 235 (284)
T ss_pred cccCCcc---eeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHH
Confidence 6532111 00111234566799999998889999999999999999999999887543211
Q ss_pred HHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 606 EQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 606 ~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
...+..+. . ...+..++..+.+++.+||..+|.+||++.+++.
T Consensus 236 ~~~~~~~~-------~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 278 (284)
T cd05038 236 LELLKEGE-------R-LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL 278 (284)
T ss_pred HHHHHcCC-------c-CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 11111111 0 0112233456999999999999999999999973
No 330
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.1e-34 Score=298.13 Aligned_cols=249 Identities=26% Similarity=0.448 Sum_probs=204.1
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|.+.+.||.|+||.||++.+. +..|++|++..... .....+.+|+++++.++|||++++++.+.+ ..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5888999999999999999985 66799999876543 345568999999999999999999988744 44799999
Q ss_pred cCCCChhhHhcccC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQKD-NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++++|.+++.... ....+++..+..++.+++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999999886532 2367899999999999999999999999 9999999999999999999999999998664321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~ 625 (701)
.......|++.|+|||.+....++.++|+||||+++|+|++|++||....... ..+..+.. ...
T Consensus 158 ------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~ 223 (258)
T cd08215 158 ------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY--------PPI 223 (258)
T ss_pred ------ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC--------CCC
Confidence 12234578899999999988889999999999999999999999997654221 11112211 112
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
|...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 224 ~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 224 PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 22334568999999999999999999999999874
No 331
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=9.7e-35 Score=303.74 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=198.7
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
|.+.+.||.|++|.||+|.. .+..+++|.+...... ....+.+|+.+++.++||||+++++++.+ ..++||||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 56778999999999999998 4666999998765433 34568899999999999999999998844 448999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
. ++|.+.+.... ..+++..+..++.|++.||.|||+.+ |+|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~-~~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-- 152 (283)
T cd05118 81 D-TDLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-- 152 (283)
T ss_pred C-CCHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--
Confidence 6 48888775533 46899999999999999999999999 9999999999999999999999999998764432
Q ss_pred ccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc----Cc-----cccccC
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN----GT-----FSELLD 619 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~----~~-----~~~~ld 619 (701)
.......++..|+|||.+.+. .++.++|+||||+++|+|+||++||...+..+..... +. +..+.+
T Consensus 153 ----~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 ----RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred ----ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchh
Confidence 112335688899999988776 7899999999999999999999999766543322110 00 000000
Q ss_pred --------------ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 620 --------------PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 620 --------------~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..........+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence 00000112345678999999999999999999999999884
No 332
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-35 Score=317.11 Aligned_cols=253 Identities=23% Similarity=0.342 Sum_probs=197.3
Q ss_pred cCceeeeeeeecCceeEEEEEEC-CceEEEEEeCCCCCC--ChHHHHHHHHHHHhC-CCCcEEEEecee--cCCCceEEe
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQ--GPRQFKQEVEILGSM-RHTNMVILLGAC--PEYGCLVYE 467 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l-~HpnIv~l~g~~--~~~~~lV~E 467 (701)
..|+++++||+||.+.||++... .+.||+|.+.....+ ...-|.+|+..|.+| .|.+||.|++|- ....|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 35888999999999999999984 455888766544433 345699999999999 589999999985 445589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|- ..+|...|.++.... ..| .+..+..||+.|+.++|+.| |||.||||.|+|+-. |.+||+|||+|.-+.++.
T Consensus 441 ~G-d~DL~kiL~k~~~~~-~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 441 CG-DIDLNKILKKKKSID-PDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLVK-GRLKLIDFGIANAIQPDT 513 (677)
T ss_pred cc-cccHHHHHHhccCCC-chH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEEe-eeEEeeeechhcccCccc
Confidence 97 569999887655433 334 55678999999999999999 999999999999976 479999999999887654
Q ss_pred CcccccccccccccCCCccCcccccCC-----------CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCcccc
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTG-----------MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSE 616 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~ 616 (701)
+.......+||+.||+||.+... +.++++||||||||||+|+.|++||+.-..... ++..
T Consensus 514 ----TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a-----Kl~a 584 (677)
T KOG0596|consen 514 ----TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA-----KLHA 584 (677)
T ss_pred ----cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH-----HHHh
Confidence 33344677999999999965432 267899999999999999999999975543222 3333
Q ss_pred ccCccC-CCCCHHH-HHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 617 LLDPTV-TGWPVEA-ALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 617 ~ld~~~-~~~p~~~-~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+.+|.. ..+|.-- ..++.+++..||..||++||++.++|.|+|..+
T Consensus 585 I~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 585 ITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred hcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 455522 2222111 112899999999999999999999999999877
No 333
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=6.8e-35 Score=313.11 Aligned_cols=258 Identities=26% Similarity=0.340 Sum_probs=201.8
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC-------CCc
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE-------YGC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~ 463 (701)
+|.+.+.||.|+||.||+|... +..|+||.+.... ....+.+.+|+.+++.++||||+++++++.+ ..|
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5889999999999999999984 5679999987654 2344678999999999999999999998844 348
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||||+. ++|.+++... .++++..+..++.||+.||.|||+.+ |+||||||.|||++.++.++|+|||++...
T Consensus 81 lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~~ 153 (330)
T cd07834 81 IVTELME-TDLHKVIKSP---QPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARGV 153 (330)
T ss_pred EEecchh-hhHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEee
Confidence 9999996 5888877432 37899999999999999999999999 999999999999999999999999999876
Q ss_pred CCCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHc-Ccccc--
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRN-GTFSE-- 616 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~-~~~~~-- 616 (701)
...... ........++..|+|||++.+. .++.++|+||||+++|+|++|++||......... ... +....
T Consensus 154 ~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 154 DPDEDE---KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred cccccc---cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 443210 1123445789999999998887 7899999999999999999999999765532211 110 00000
Q ss_pred -----------ccC-------ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 617 -----------LLD-------PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 617 -----------~ld-------~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+. ..+.......+..+.+++.+||+.+|.+||++.+++.|+|++-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~ 294 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ 294 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence 000 0000001113456889999999999999999999999999974
No 334
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=317.36 Aligned_cols=251 Identities=26% Similarity=0.430 Sum_probs=208.0
Q ss_pred HHHHHhhcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CC
Q 005343 387 EEIEAATDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YG 462 (701)
Q Consensus 387 ~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 462 (701)
++|+.-..+.....+||-|-||.||.|.|+.- .||||.++.+. ...++|..|..+|+.++|||+|+|+|+|.. .+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 34444455667788999999999999999654 49999998765 556889999999999999999999999954 45
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
|||.|||..|+|.+||.+.++ ..++.-..+.++.||..|+.||...+ +|||||-..|+|+..+..+||+||||+++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr-~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsRl 414 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNR-SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSRL 414 (1157)
T ss_pred EEEEecccCccHHHHHHHhch-hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhhh
Confidence 899999999999999966543 45777888999999999999999999 99999999999999999999999999999
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccC
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLD 619 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld 619 (701)
+..+.. + .....--.+-|.|||-+....++.++|||+|||+|||+.| |..||.+-+ ++...+++|-.
T Consensus 415 MtgDTY---T--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR----- 484 (1157)
T KOG4278|consen 415 MTGDTY---T--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR----- 484 (1157)
T ss_pred hcCCce---e--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc-----
Confidence 854321 1 1122223567999999999999999999999999999988 778886554 45556665531
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.+.|..|+....+|+..||+++|.+||++.+|-
T Consensus 485 ---M~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiH 517 (1157)
T KOG4278|consen 485 ---MDGPEGCPPKVYELMRACWNWSPSDRPSFAEIH 517 (1157)
T ss_pred ---ccCCCCCCHHHHHHHHHHhcCCcccCccHHHHH
Confidence 244667777899999999999999999999884
No 335
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.2e-34 Score=299.57 Aligned_cols=246 Identities=24% Similarity=0.428 Sum_probs=194.6
Q ss_pred CceeeeeeeecCceeEEEEEECC---ceEEEEEeCCCCC----------CChHHHHHHHHHHHh-CCCCcEEEEeceecC
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH---TSVAIKVLGPDIS----------QGPRQFKQEVEILGS-MRHTNMVILLGACPE 460 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~---~~vAiK~l~~~~~----------~~~~~~~~Ei~il~~-l~HpnIv~l~g~~~~ 460 (701)
+|.+.+.||+|+||.||+|.+.. ..+|+|.+..... .....+.+|+.++.+ ++||||++++++|.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999854 5699998754321 123457789988865 799999999999854
Q ss_pred --CCceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEe
Q 005343 461 --YGCLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISD 536 (701)
Q Consensus 461 --~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~D 536 (701)
..++||||+++++|.+++... .....+++..+..++.|++.||.|||+ .+ ++|+||+|.|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 448999999999999887442 334568999999999999999999996 56 99999999999999999999999
Q ss_pred eccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCcc
Q 005343 537 VGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTF 614 (701)
Q Consensus 537 FGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~ 614 (701)
||++....... ......|+..|++||++.+..++.++||||||+++|+|++|++||....... ..+..+.+
T Consensus 158 fg~~~~~~~~~-------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~ 230 (269)
T cd08528 158 FGLAKQKQPES-------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVY 230 (269)
T ss_pred ccceeeccccc-------ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccC
Confidence 99998654321 2345578999999999998889999999999999999999999997654332 22222222
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
... .. ...+..+.+++.+||+.+|.+||++.++...
T Consensus 231 ~~~----~~---~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~ 266 (269)
T cd08528 231 EPL----PE---GMYSEDVTDVITSCLTPDAEARPDIIQVSAM 266 (269)
T ss_pred CcC----Cc---ccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence 111 11 1223468999999999999999999998753
No 336
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.6e-35 Score=315.06 Aligned_cols=259 Identities=23% Similarity=0.318 Sum_probs=197.8
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC----------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE---------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---------- 460 (701)
.++|.+.+.||.|+||.||+|... +..|++|.+........+.+.+|+++++.++||||+++++.+..
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 368999999999999999999984 55699999876655556778999999999999999999987633
Q ss_pred ------CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc-CCCcEE
Q 005343 461 ------YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD-QNYVSK 533 (701)
Q Consensus 461 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~-~~~~~K 533 (701)
..|+||||+. ++|.+++.. ..+++.....++.||+.||.|||+.+ |+||||||+|||++ .++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~k 155 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVLK 155 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceEE
Confidence 2479999996 588877732 35889999999999999999999999 99999999999997 566889
Q ss_pred EEeeccccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH--
Q 005343 534 ISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR-- 610 (701)
Q Consensus 534 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~-- 610 (701)
|+|||+++.+...... ........|+..|+|||++.. ..++.++|||||||++|+|++|++||...+.......
T Consensus 156 l~dfg~~~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~ 232 (342)
T cd07854 156 IGDFGLARIVDPHYSH---KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLIL 232 (342)
T ss_pred ECCcccceecCCcccc---ccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 9999999865332110 011133467899999997644 5688999999999999999999999975543322111
Q ss_pred -cCcc-------------cc-cc-CccCCCCC-----HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 611 -NGTF-------------SE-LL-DPTVTGWP-----VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 611 -~~~~-------------~~-~l-d~~~~~~p-----~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.... .. .. .......+ ......+.+++.+||..+|.+||++.+++.|+|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~ 305 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC 305 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence 0000 00 00 00000111 122345889999999999999999999999999974
No 337
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.7e-34 Score=308.73 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=194.9
Q ss_pred eeeeec--CceeEEEEEE--CCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEG--GYGPVYKAQL--DHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G--~fg~Vyk~~~--~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
..||+| +||.||++.+ .++.||+|++...... ..+.+.+|+.+++.++||||++++++|.. ..++||||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 9999999998 5677999998765422 23568899999999999999999999844 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc-c
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD-T 550 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~-~ 550 (701)
|+|.+++.... ...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+|++|||.+......... .
T Consensus 84 ~~l~~~l~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYF-PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 99999886543 235889999999999999999999999 999999999999999999999999866433221110 0
Q ss_pred cccccccccccCCCccCcccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc--Ccc-c----------
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTG--MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN--GTF-S---------- 615 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~--~~~-~---------- 615 (701)
..........++..|++||++.+. .++.++|||||||++|+|++|++||............ +.. .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCE 239 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchh
Confidence 000001122456779999998764 4789999999999999999999999755432222111 000 0
Q ss_pred --------------------------cccCccC-CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 616 --------------------------ELLDPTV-TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 616 --------------------------~~ld~~~-~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
...+..+ ...+......+.+|+.+||..+|.+|||+.+++.|+|++....
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~ 316 (328)
T cd08226 240 ESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKE 316 (328)
T ss_pred hhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHH
Confidence 0000000 0111234567899999999999999999999999999986444
No 338
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.9e-34 Score=300.36 Aligned_cols=246 Identities=21% Similarity=0.370 Sum_probs=192.5
Q ss_pred ceeeeeeeecCceeEEEEEEC-----CceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceecCC-------
Q 005343 396 FSISRKIGEGGYGPVYKAQLD-----HTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACPEY------- 461 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~-----~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~------- 461 (701)
|.+.+.||+|+||.||+|.+. +..||||++...... ..+.+.+|+.+++.++||||+++++++...
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567789999999999999862 356999998765432 245688999999999999999999987321
Q ss_pred -CceEEeecCCCChhhHhccc---CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 462 -GCLVYEYMENGSLEDRLFQK---DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 462 -~~lV~Ey~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
.+++++|+.+|+|.+++... .....+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 25889999999998887532 12235788899999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH--HHHHHcCcc
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV--EQAIRNGTF 614 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~--~~~i~~~~~ 614 (701)
|+++.+..... ........+++.|++||.+....++.++|||||||++|+|++ |++||...... ...+..+..
T Consensus 158 g~~~~~~~~~~----~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~ 233 (273)
T cd05074 158 GLSKKIYSGDY----YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNR 233 (273)
T ss_pred cccccccCCcc----eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCc
Confidence 99986533211 111223345678999999998889999999999999999999 89999755432 222222211
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhh
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVL 656 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~ 656 (701)
. ..+...+..+.+++.+||+.+|.+||++.+++.
T Consensus 234 ~--------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~ 267 (273)
T cd05074 234 L--------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRD 267 (273)
T ss_pred C--------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 0 112233456999999999999999999999974
No 339
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.4e-34 Score=311.74 Aligned_cols=263 Identities=23% Similarity=0.279 Sum_probs=197.0
Q ss_pred hcCcee-eeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC--------------hHHHHHHHHHHHhCCCCcEEEEe
Q 005343 393 TDYFSI-SRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG--------------PRQFKQEVEILGSMRHTNMVILL 455 (701)
Q Consensus 393 ~~~f~~-~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~--------------~~~~~~Ei~il~~l~HpnIv~l~ 455 (701)
.++|.. .+.||.|+||.||+|.+ .++.||||++....... ...+.+|+++++.++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 345654 46799999999999987 45679999886543222 12477899999999999999999
Q ss_pred ceec--CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEE
Q 005343 456 GACP--EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSK 533 (701)
Q Consensus 456 g~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~K 533 (701)
+++. +..|+||||+. |+|.+++.. ...+++.....++.|++.||.|||+.+ |+||||+|+|||++.++.+|
T Consensus 87 ~~~~~~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 87 DVYVEGDFINLVMDIMA-SDLKKVVDR---KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEEecCCcEEEEEeccc-cCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 9974 44589999996 689888843 345889999999999999999999999 99999999999999999999
Q ss_pred EEeeccccccCCCCCcc--------cccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchH
Q 005343 534 ISDVGLARLVPPSAADT--------ITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQ 604 (701)
Q Consensus 534 L~DFGla~~~~~~~~~~--------~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~ 604 (701)
|+|||++.......... ..........+++.|+|||++.+. .++.++|||||||++|+|+||++||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999998764211000 001122344678899999988764 479999999999999999999999986654
Q ss_pred HHHHHH------cCc---ccccc------------CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 605 VEQAIR------NGT---FSELL------------DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 605 ~~~~i~------~~~---~~~~l------------d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+.... ... +.... .+.........+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~ 318 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCC
Confidence 332211 000 00000 00000001122446889999999999999999999999999974
No 340
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-34 Score=299.88 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=197.7
Q ss_pred CceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCC-----CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDIS-----QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
+|.+.+.||+|+||.||++.+..+ .+++|+++.... .....+..|+.+++.++||||+++++++.+ ..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 478899999999999999988543 466666654221 223457789999999999999999998844 45899
Q ss_pred EeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 466 YEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|||+++++|.+++... .....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++. +.+||+|||++..+.
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999888542 33457899999999999999999999999 999999999999986 569999999998764
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.... ......|++.|+|||++....++.++|+||||+++|+|++|..||............ .......
T Consensus 157 ~~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~ 224 (260)
T cd08222 157 GSCD------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI------VEGPTPS 224 (260)
T ss_pred CCcc------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH------HcCCCCC
Confidence 3211 123456788999999998888999999999999999999999999755443222111 0111122
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+...+..+.+++.+||..+|.+||++.+++.|+|+
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 225 LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 344555678999999999999999999999999874
No 341
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1.3e-34 Score=301.97 Aligned_cols=254 Identities=27% Similarity=0.378 Sum_probs=204.1
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC---CChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS---QGPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV 465 (701)
++|.+.+.||.|+||.||+|.. .+..|++|++..... .....+.+|+.++.+++ ||||+++++.+.+ ..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4689999999999999999998 466799999876432 22346889999999998 9999999998854 44899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|||+++++|.+++... ..+++..+..|+.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~---~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKY---GSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 9999999999988543 36999999999999999999999999 99999999999999999999999999987643
Q ss_pred CCCcc--------------cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc
Q 005343 546 SAADT--------------ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN 611 (701)
Q Consensus 546 ~~~~~--------------~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~ 611 (701)
..... ..........|+..|++||.+....++.++|+||||+++++|++|++||............
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~ 234 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKI 234 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence 22110 0012234556889999999998888999999999999999999999999866532221110
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCCh----hhhhhHHHH
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDL----VSVVLPELI 660 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~----~~vl~~~~~ 660 (701)
. .....+|...+..+.+++.+||+.+|.+||++ .+++.|+|+
T Consensus 235 ~-------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 235 L-------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred H-------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence 0 00112233335568999999999999999999 999999874
No 342
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=295.71 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=204.3
Q ss_pred hcCceee-eeeeecCceeEEEEEECCce--EEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecCCC------
Q 005343 393 TDYFSIS-RKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPEYG------ 462 (701)
Q Consensus 393 ~~~f~~~-~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~~------ 462 (701)
+++|.+. .+||-|-.|.|..+.++.+. +|+|++.. .....+|+++.-.. .|||||.++++|.+..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-----s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-----SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-----CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 4455554 57999999999999886554 99999853 34568899886555 6999999999985432
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc---CCCcEEEEeecc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD---QNYVSKISDVGL 539 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~---~~~~~KL~DFGl 539 (701)
.+|||.|+||.|...+..++ ...|++.+...|+.||+.|+.|||+.+ |.||||||+|+|.. .|-.+||+|||+
T Consensus 135 LiVmE~meGGeLfsriq~~g-~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDfGF 210 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDRG-DQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDFGF 210 (400)
T ss_pred EeeeecccchHHHHHHHHcc-cccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccccc
Confidence 47999999999999986643 467999999999999999999999999 99999999999996 466889999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHcCc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH------QVEQAIRNGT 613 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~------~~~~~i~~~~ 613 (701)
|+.-. ......+.|-|++|.|||++...+|+..+|+||+|||+|-||.|+|||...+ .+...|+.|.
T Consensus 211 AK~t~-------~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gq 283 (400)
T KOG0604|consen 211 AKETQ-------EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQ 283 (400)
T ss_pred ccccC-------CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccC
Confidence 98542 2344678899999999999999999999999999999999999999996443 4566677665
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+. +-++ .| ...+....++|..+|..+|.+|.|+.+++.|+|..-
T Consensus 284 y~-FP~p---EW-s~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 284 YE-FPEP---EW-SCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred cc-CCCh---hH-hHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 42 1112 23 244566889999999999999999999999999863
No 343
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=326.22 Aligned_cols=249 Identities=28% Similarity=0.446 Sum_probs=206.8
Q ss_pred cCceeeeeeeecCceeEEEEEEC--C---ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecCC--CceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--H---TSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~---~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV 465 (701)
+.-.+.+.||.|.||+||+|+++ + ..||||.|+...... ...|..|..||.+++||||+.|-|+.... ..||
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIi 708 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMII 708 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEE
Confidence 45678899999999999999983 2 349999998765443 45699999999999999999999998543 3689
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
.|||++|+|+.+|..++ ..|++.+...++..|+.|+.||-+.+ +|||||-..|||++.|.++|++||||+|.+..
T Consensus 709 TEyMENGsLDsFLR~~D--GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 709 TEYMENGSLDSFLRQND--GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhhCCcHHHHHhhcC--CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeeccc
Confidence 99999999999997766 45999999999999999999999999 99999999999999999999999999998855
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCc--hHHHHHHHcCccccccCccC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLS--HQVEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~--~~~~~~i~~~~~~~~ld~~~ 622 (701)
+.. ..|.....--...|.|||.+...+++.++|||||||++||.++ |..|+-.- +++-..+++|-- +
T Consensus 784 d~~---~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyR-------L 853 (996)
T KOG0196|consen 784 DPE---AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYR-------L 853 (996)
T ss_pred CCC---ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccC-------C
Confidence 431 1111122222468999999999999999999999999999876 88887533 456677776631 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPE 658 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~ 658 (701)
.-|.+++..|..|++.||+++..+||.+.+|+.+.
T Consensus 854 -PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~l 888 (996)
T KOG0196|consen 854 -PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTL 888 (996)
T ss_pred -CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 23567888899999999999999999999998643
No 344
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=2.4e-34 Score=304.29 Aligned_cols=251 Identities=23% Similarity=0.312 Sum_probs=195.0
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVY 466 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~ 466 (701)
.++|.+.+.||+|+||.||+|.+. ++.||||.+...... ....+..|+.++.... ||||++++++|.+ ..++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 467899999999999999999996 677999998764322 3345677887776664 9999999999854 448999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
||+ +++|.+.+.... .++++..+..++.|++.||.|||+ .+ |+||||+|+||+++.++.+||+|||++..+..
T Consensus 94 e~~-~~~l~~l~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 94 ELM-STCLDKLLKRIQ--GPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ecc-CcCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 998 457777664432 368999999999999999999997 47 99999999999999999999999999876532
Q ss_pred CCCcccccccccccccCCCccCcccccCCC----CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---HcCcccccc
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGM----LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---RNGTFSELL 618 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~~~~~~~~l 618 (701)
... .....++..|+|||++.+.. ++.++||||||+++|+|++|++||.........+ ..+...
T Consensus 168 ~~~-------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--- 237 (296)
T cd06618 168 SKA-------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP--- 237 (296)
T ss_pred CCc-------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC---
Confidence 211 12335788999999887554 7889999999999999999999997533211111 111111
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.. .+....+..+.+++.+||..+|.+||++.+++.|+|+..
T Consensus 238 --~~-~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 238 --SL-PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred --CC-CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 11 111123456899999999999999999999999999875
No 345
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=4.2e-34 Score=299.59 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=195.3
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC--hHHHHHHHHHHHhC---CCCcEEEEeceecC--C-----
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG--PRQFKQEVEILGSM---RHTNMVILLGACPE--Y----- 461 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l---~HpnIv~l~g~~~~--~----- 461 (701)
|++.+.||.|+||.||+|.+. ++.||+|.+....... ...+.+|+.++..+ +|||+++++++|.+ .
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 678899999999999999984 5679999997554322 34567788887666 59999999999842 3
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
.+++|||+. ++|.+++.... ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~-~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP-KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcce
Confidence 579999996 58888775432 235899999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHcCcc----
Q 005343 542 LVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRNGTF---- 614 (701)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~~~~---- 614 (701)
.+.... ......++..|+|||++.+..++.++|||||||++|+|++|++||......+.. +..-..
T Consensus 156 ~~~~~~-------~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07838 156 IYSFEM-------ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEE 228 (287)
T ss_pred eccCCc-------ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChH
Confidence 763321 112345788999999999989999999999999999999999999766543221 110000
Q ss_pred -------------ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 615 -------------SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 615 -------------~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
..................+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 229 EWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287 (287)
T ss_pred hcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence 0000000000111234567899999999999999999999999884
No 346
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.7e-34 Score=303.04 Aligned_cols=255 Identities=18% Similarity=0.204 Sum_probs=180.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCc-----eEEEEEeCCCCCCChH-----------HHHHHHHHHHhCCCCcEEEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHT-----SVAIKVLGPDISQGPR-----------QFKQEVEILGSMRHTNMVILL 455 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~-----~vAiK~l~~~~~~~~~-----------~~~~Ei~il~~l~HpnIv~l~ 455 (701)
..+.|.+.++||+|+||.||+|.+.++ .+++|+.......... ....++..+..+.|+|++.++
T Consensus 10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~ 89 (294)
T PHA02882 10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY 89 (294)
T ss_pred CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence 346799999999999999999998544 4677764433221111 112333445667899999999
Q ss_pred ceecCC------CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC
Q 005343 456 GACPEY------GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN 529 (701)
Q Consensus 456 g~~~~~------~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~ 529 (701)
+.+... .+++++++ ..++.+.+.. ...+++..+..|+.|++.||.|||+.+ |+||||||+|||++.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKR---IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGN 162 (294)
T ss_pred EeeeEecCCceEEEEEEehh-ccCHHHHHHh---hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 875322 25677776 3466665532 223577888999999999999999999 9999999999999999
Q ss_pred CcEEEEeeccccccCCCCCcc-cccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Q 005343 530 YVSKISDVGLARLVPPSAADT-ITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA 608 (701)
Q Consensus 530 ~~~KL~DFGla~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~ 608 (701)
+.+||+|||+|+.+....... ..........||+.|+|||++.+..++.++|||||||+||||++|++||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 999999999998764321110 0111123457999999999999999999999999999999999999999755211111
Q ss_pred HH---cCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 609 IR---NGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 609 i~---~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
+. .+-+..+..... .+..++..+.+++..|+..+|.+||++.+++
T Consensus 243 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~ 290 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKI--KIKNANKFIYDFIECVTKLSYEEKPDYDALI 290 (294)
T ss_pred HHHhHHHHHHHhhhhhh--ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 10 000111111111 0112345689999999999999999999986
No 347
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.3e-34 Score=304.40 Aligned_cols=244 Identities=26% Similarity=0.367 Sum_probs=194.5
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
|...+.||+|+||.||+|.+ .+..||+|.+....... ...+.+|+.+++.++|||+++++++|.+ ..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 77788999999999999997 45669999987543222 3468889999999999999999999844 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. |+|.+.+... ..++++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 107 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 96 5777766443 345899999999999999999999999 999999999999999999999999998754321
Q ss_pred cccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVT 623 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~ 623 (701)
....|++.|+|||++. .+.++.++|||||||++|+|++|++||........ .+..+.... .
T Consensus 179 --------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-----~- 244 (317)
T cd06635 179 --------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT-----L- 244 (317)
T ss_pred --------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC-----C-
Confidence 2346888999999863 45689999999999999999999999865433221 111111110 0
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+...+..+.+++.+||+.+|.+||++.+++.|.|+..
T Consensus 245 -~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 282 (317)
T cd06635 245 -QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLR 282 (317)
T ss_pred -CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhc
Confidence 01123345899999999999999999999999998865
No 348
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.4e-34 Score=304.75 Aligned_cols=253 Identities=22% Similarity=0.290 Sum_probs=199.3
Q ss_pred CceeeeeeeecCceeEEEEEE-----CCceEEEEEeCCCCC----CChHHHHHHHHHHHhC-CCCcEEEEeceecCC--C
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-----DHTSVAIKVLGPDIS----QGPRQFKQEVEILGSM-RHTNMVILLGACPEY--G 462 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~~----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~ 462 (701)
+|++.+.||.|+||.||++.. ++..||+|++..... ...+.+.+|+.++..+ +||||+.+++.+... .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 478899999999999999986 456799999875422 2235688999999999 599999999888543 4
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+++++|.+++... .++++.....++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQR---ERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 7999999999999998543 35788899999999999999999999 99999999999999999999999999986
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCchH---HHHHHHcCccccc
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTG--MLGVKSDLYSLGVVLLQLITARPAMGLSHQ---VEQAIRNGTFSEL 617 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDvwSlGvil~elltG~~pf~~~~~---~~~~i~~~~~~~~ 617 (701)
+..... .......|+..|+|||++... .++.++||||||+++|+|+||.+||..... ...... ..
T Consensus 155 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~-~~---- 224 (290)
T cd05613 155 FHEDEV-----ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISR-RI---- 224 (290)
T ss_pred cccccc-----cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHH-Hh----
Confidence 533211 112345689999999987653 478899999999999999999999964321 111111 00
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHh
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRD 664 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~ 664 (701)
......+|......+.+++.+||..+|.+|| ++.+++.|+|+.-..
T Consensus 225 -~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 225 -LKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred -hccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence 0011123344455689999999999999997 889999999987644
No 349
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=3.9e-34 Score=294.40 Aligned_cols=246 Identities=26% Similarity=0.411 Sum_probs=201.8
Q ss_pred CceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
+|++.+.||+|+||.||++... +..+++|.+..... .....+.+|+.+++.++||||+++++++.+ ..++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4889999999999999999874 45699999875432 223457889999999999999999988744 44899999
Q ss_pred cCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 469 MENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 469 ~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
+++++|.+++... .....+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 9999999988553 22356899999999999999999999999 9999999999999999999999999998764321
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~ 625 (701)
.....++..|++||.+.+..++.++|+||||+++|+|++|++||...... ...+..+.+. ..
T Consensus 158 --------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~--------~~ 221 (256)
T cd08530 158 --------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP--------PI 221 (256)
T ss_pred --------cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC--------CC
Confidence 12346888999999999999999999999999999999999999766532 2223333222 22
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
+......+.+++.+||..+|.+||++.+++.|++
T Consensus 222 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 222 PPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred chhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 2344556999999999999999999999998864
No 350
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=2.5e-34 Score=301.64 Aligned_cols=245 Identities=26% Similarity=0.287 Sum_probs=188.7
Q ss_pred eeeecCceeEEEEEEC--CceEEEEEeCCCCCCC---hHHHHHHHH---HHHhCCCCcEEEEeceecC--CCceEEeecC
Q 005343 401 KIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG---PRQFKQEVE---ILGSMRHTNMVILLGACPE--YGCLVYEYME 470 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~---~~~~~~Ei~---il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 470 (701)
.||+|+||.||+|... ++.||+|.+....... ...+..|.. +++...||||+.+++.+.+ ..|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999874 5679999886543221 122344443 4445689999999988744 4589999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
||+|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..+....
T Consensus 81 g~~L~~~l~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--- 151 (278)
T cd05606 81 GGDLHYHLSQ---HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--- 151 (278)
T ss_pred CCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC---
Confidence 9999988843 246899999999999999999999999 9999999999999999999999999987653211
Q ss_pred cccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHH-HHHHcCccccccCccCCCCCHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVE-QAIRNGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~-~~i~~~~~~~~ld~~~~~~p~~ 628 (701)
.....|+..|+|||++.++ .++.++|||||||++|+|++|++||....... ..+..... .. ...+|..
T Consensus 152 -----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~---~~~~~~~ 221 (278)
T cd05606 152 -----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL--TM---AVELPDS 221 (278)
T ss_pred -----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhh--cc---CCCCCCc
Confidence 1234789999999998754 58999999999999999999999997542110 01111110 00 1123333
Q ss_pred HHHHHHHHHHHhhccCcCCCC-----ChhhhhhHHHHHHHh
Q 005343 629 AALSIAKLALQCCELRKRDRP-----DLVSVVLPELIRLRD 664 (701)
Q Consensus 629 ~~~~l~~li~~cl~~~P~~RP-----t~~~vl~~~~~~l~~ 664 (701)
.+..+.+++.+||..+|.+|| ++.+++.|+|++--+
T Consensus 222 ~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~ 262 (278)
T cd05606 222 FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262 (278)
T ss_pred CCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence 456799999999999999999 999999999997543
No 351
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-34 Score=297.25 Aligned_cols=245 Identities=27% Similarity=0.323 Sum_probs=196.7
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCC---CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDIS---QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||.|+||.||++.+. +..+++|++..... .....+.+|++++++++||||+++++.+.. ..|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999985 66799999876543 234568999999999999999999988744 34899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc--cc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT--IT 552 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~--~~ 552 (701)
.+++.+.. .+++..+..++.||+.||.|||+.+ ++||||+|+||+++.++.+||+|||++.......... ..
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99885433 6899999999999999999999999 9999999999999999999999999987643221100 00
Q ss_pred cccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccCCCCCHHH-
Q 005343 553 QYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTVTGWPVEA- 629 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~~~~p~~~- 629 (701)
........++..|++||.+....++.++||||||+++|+|++|++||........ .+..+.+ .+|...
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~---------~~~~~~~ 225 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI---------EWPEDVE 225 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc---------CCCcccc
Confidence 1122345688899999999888899999999999999999999999975543221 1222211 122222
Q ss_pred -HHHHHHHHHHhhccCcCCCCCh---hhhhhHHHHH
Q 005343 630 -ALSIAKLALQCCELRKRDRPDL---VSVVLPELIR 661 (701)
Q Consensus 630 -~~~l~~li~~cl~~~P~~RPt~---~~vl~~~~~~ 661 (701)
+..+.+++.+||+.+|.+||++ .+++.|+|++
T Consensus 226 ~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~ 261 (265)
T cd05579 226 VSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFK 261 (265)
T ss_pred CCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCcccc
Confidence 4568999999999999999999 9999999985
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.6e-34 Score=309.21 Aligned_cols=255 Identities=25% Similarity=0.330 Sum_probs=197.4
Q ss_pred HHhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC---CC
Q 005343 390 EAATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE---YG 462 (701)
Q Consensus 390 ~~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~ 462 (701)
...+++|.+.+.||.|+||.||+|... +..||+|.+..... .....+.+|+.++..++||||++++++|.. ..
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 346789999999999999999999874 55699998865432 234568899999999999999999998732 45
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+ +++|..++.. .++++.....++.|++.||.|||+.+ |+||||+|+|||++.++.+||+|||++..
T Consensus 86 ~lv~e~~-~~~L~~~~~~----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 86 YFVTELL-GTDLHRLLTS----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEeehh-ccCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccccc
Confidence 8999998 6788887732 35788888899999999999999999 99999999999999999999999999875
Q ss_pred cCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HH---------
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IR--------- 610 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~--------- 610 (701)
.... .....++..|+|||++.+ ..++.++|||||||++|+|+||++||......... +.
T Consensus 158 ~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~ 228 (328)
T cd07856 158 QDPQ---------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228 (328)
T ss_pred cCCC---------cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 4221 133467889999998765 56899999999999999999999999654321110 00
Q ss_pred ------cCccccccCc--cCCCCCH-----HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 611 ------NGTFSELLDP--TVTGWPV-----EAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 611 ------~~~~~~~ld~--~~~~~p~-----~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.+....+... .....|. ..+..+.+++.+||+.+|.+||++.+++.|+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~ 292 (328)
T cd07856 229 VINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLA 292 (328)
T ss_pred HHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccc
Confidence 0000000000 0000111 1235689999999999999999999999999985
No 353
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.6e-34 Score=300.32 Aligned_cols=253 Identities=26% Similarity=0.392 Sum_probs=198.2
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
|+..+.||+|+||.||+|... ++.|++|++.... ......+..|+.+++.++|||++++++++.+ ..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 567788999999999999984 5679999988754 2234568899999999999999999999854 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
. ++|.+++.... ..+++..+..++.|++.||.|||+.+ |+||||+|+||+++.++.+||+|||++........
T Consensus 81 ~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 153 (282)
T cd07829 81 D-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR- 153 (282)
T ss_pred C-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc-
Confidence 7 68999886542 46899999999999999999999999 99999999999999999999999999986643211
Q ss_pred ccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCc---------c---cc
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGT---------F---SE 616 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~---------~---~~ 616 (701)
......++..|+|||++.+. .++.++|||||||++|+|++|++||.............. + ..
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (282)
T cd07829 154 -----TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTK 228 (282)
T ss_pred -----ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcc
Confidence 12334567889999988776 789999999999999999999999977654322111000 0 00
Q ss_pred c--cCccCCCCC--------HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 617 L--LDPTVTGWP--------VEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 617 ~--ld~~~~~~p--------~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
+ .+.....++ ......+.+++.+||..+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 229 LPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282 (282)
T ss_pred cccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence 0 000011110 0124569999999999999999999999999885
No 354
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=2.1e-34 Score=301.65 Aligned_cols=253 Identities=25% Similarity=0.354 Sum_probs=195.0
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
|.+.+.||.|+||.||+|... +..|+||.+...... ......+|+..+.+++ |||++.+++++.+ ..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 677899999999999999984 456999988765432 2234567999999999 9999999999844 448999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
+|+|.+.+.... ...+++..+..++.|++.+|.|||+++ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~-- 153 (283)
T cd07830 81 -EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP-- 153 (283)
T ss_pred -CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC--
Confidence 889998885543 346899999999999999999999999 9999999999999999999999999998653321
Q ss_pred ccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcC----------------
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNG---------------- 612 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~---------------- 612 (701)
......++..|+|||++. ...++.++|+||||+++|+|++|++||.............
T Consensus 154 -----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (283)
T cd07830 154 -----PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYK 228 (283)
T ss_pred -----CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhh
Confidence 123356889999999774 4557999999999999999999999997654332221100
Q ss_pred ---ccccccCcc----CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 613 ---TFSELLDPT----VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 613 ---~~~~~ld~~----~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+...+... +.......+..+.+++.+||+.+|.+||++.+++.|+|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 229 LASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred hhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence 000000000 000001113568999999999999999999999999874
No 355
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.6e-34 Score=297.72 Aligned_cols=243 Identities=23% Similarity=0.341 Sum_probs=181.9
Q ss_pred eeeecCceeEEEEEEC-Cc---eEEEEEeCCCCC-CChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCC
Q 005343 401 KIGEGGYGPVYKAQLD-HT---SVAIKVLGPDIS-QGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGS 473 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~-~~---~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 473 (701)
.||+|+||.||+|... +. .+++|.+..... .....+.+|+.+++.++||||+++++.|.+ ..|+||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999752 22 366777665432 234579999999999999999999999854 4589999999999
Q ss_pred hhhHhcccC-CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccc
Q 005343 474 LEDRLFQKD-NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTIT 552 (701)
Q Consensus 474 L~~~l~~~~-~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~ 552 (701)
|.+++.+.. ....+++.....++.||+.||.|||+.+ ++||||||+|||++.++.+||+|||++....... .
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~----~ 154 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED----Y 154 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcch----h
Confidence 999986542 2345677778899999999999999999 9999999999999999999999999986432110 0
Q ss_pred cccccccccCCCccCcccccC-------CCCCchhhHHHHHHHHHHHHh-CCCCCCCchHH---HHHHHcCccccccCcc
Q 005343 553 QYHMTTAAGTFCYIDPEYQQT-------GMLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQV---EQAIRNGTFSELLDPT 621 (701)
Q Consensus 553 ~~~~~~~~gt~~Y~aPE~~~~-------~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~---~~~i~~~~~~~~ld~~ 621 (701)
........|+..|+|||++.. ..++.++|||||||++|||++ |.+||...... ...+..+ ...+.++.
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~ 233 (268)
T cd05086 155 IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ-QVKLFKPQ 233 (268)
T ss_pred hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc-ccccCCCc
Confidence 011234568899999998743 235789999999999999997 56788644332 2222222 22233333
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
.. ......+.+++..|| .+|.+||++.+|+
T Consensus 234 ~~---~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~ 263 (268)
T cd05086 234 LE---LPYSERWYEVLQFCW-LSPEKRATAEEVH 263 (268)
T ss_pred cC---CCCcHHHHHHHHHHh-hCcccCCCHHHHH
Confidence 22 123345788999999 6899999999986
No 356
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=4.6e-34 Score=295.57 Aligned_cols=242 Identities=23% Similarity=0.239 Sum_probs=188.8
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC---hHHHHHHHHH-HHhCCCCcEEEEeceecC--CCceEEeecCC
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG---PRQFKQEVEI-LGSMRHTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~---~~~~~~Ei~i-l~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+.||.|+||.||+|.. .++.||+|++....... ...+..|..+ ....+|||++++++.+.+ ..++||||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4699999999999998 45679999986543211 2234455544 445689999999999854 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||+|+||+++.++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------ 149 (260)
T cd05611 82 GDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------ 149 (260)
T ss_pred CCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc------
Confidence 9999988443 35788999999999999999999999 99999999999999999999999999875421
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCCCHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
.....|+..|++||.+.+..++.++||||||+++|+|+||.+||....... ..+..+... ... ..+...
T Consensus 150 ----~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~ 220 (260)
T cd05611 150 ----NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRIN--WPE---EVKEFC 220 (260)
T ss_pred ----cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccC--CCC---cccccC
Confidence 134468889999999988889999999999999999999999997554321 112222111 000 111123
Q ss_pred HHHHHHHHHHhhccCcCCCC---ChhhhhhHHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRP---DLVSVVLPELIRL 662 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RP---t~~~vl~~~~~~l 662 (701)
+..+.+++.+||..+|.+|| ++.+++.|+|++-
T Consensus 221 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~ 256 (260)
T cd05611 221 SPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKS 256 (260)
T ss_pred CHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhc
Confidence 45689999999999999999 5579999999863
No 357
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=315.36 Aligned_cols=250 Identities=26% Similarity=0.355 Sum_probs=209.0
Q ss_pred HhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCCCCcEEEEecee--cCCCce
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG--PRQFKQEVEILGSMRHTNMVILLGAC--PEYGCL 464 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~l 464 (701)
...+.|.+...||+|.|+.|.+|++ .++.||||++.+..-.. ...+.+|+++|+.++|||||+++.+. ....|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 3467899999999999999999998 45669999998765332 34589999999999999999999987 456699
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+.+|.+.++|.+++. ........++.|+..|++|||+.+ |||||||..||||+.+..+||+|||++..+.
T Consensus 133 V~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EEEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceeec
Confidence 9999999999999977654 344677789999999999999999 9999999999999999999999999998875
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCC-CchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCcc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGML-GVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~ 621 (701)
... ...+.||++.|.|||++.+..| ++.+|+||+|++||-|+.|..||.+.... ....-.|++
T Consensus 207 ~~~-------~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~------- 272 (596)
T KOG0586|consen 207 YGL-------MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY------- 272 (596)
T ss_pred ccc-------cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeee-------
Confidence 332 3467899999999999998876 78999999999999999999999765421 111112221
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..|.....+..+++.++|-++|..|+++.+|..|.|.-+
T Consensus 273 --rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~ 311 (596)
T KOG0586|consen 273 --RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRND 311 (596)
T ss_pred --cccceeechhHHHHHHhhccCccccCCHHHhhhhcccch
Confidence 123344446789999999999999999999999999775
No 358
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=313.81 Aligned_cols=250 Identities=25% Similarity=0.368 Sum_probs=206.1
Q ss_pred ceeeeeeeecCceeEEEEEECC---c--eEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecCCC-ceEEee
Q 005343 396 FSISRKIGEGGYGPVYKAQLDH---T--SVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPEYG-CLVYEY 468 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~---~--~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~-~lV~Ey 468 (701)
..+.++||+|.||.|++|.|.. + .||||.++.+... ....|.+|+.+|.+|+|||++.|||+.-+.. .||||+
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~EL 191 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFEL 191 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhh
Confidence 4556889999999999999943 2 4999999887644 5678999999999999999999999997644 699999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
++.|||.++|.+ .....|.......++.|||.|+.||.+++ +|||||-..|+||.....+||+||||.+-+.....
T Consensus 192 aplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 192 APLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred cccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 999999999977 55567888889999999999999999999 99999999999999999999999999998754322
Q ss_pred cccccccc-cccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHcCccccccCccCCC
Q 005343 549 DTITQYHM-TTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 549 ~~~~~~~~-~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~~~~~~~ld~~~~~ 624 (701)
.|.+ ....-.+.|+|||.+...+++.++|||+|||+||||+| |..||.+-. ++...++.+ ....
T Consensus 268 ----~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~--------erLp 335 (1039)
T KOG0199|consen 268 ----MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAG--------ERLP 335 (1039)
T ss_pred ----ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccc--------ccCC
Confidence 1222 22334678999999999999999999999999999998 557775443 233333322 2234
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.|..|+..+.+++..||..+|.+||++..|.+..+..
T Consensus 336 RPk~csedIY~imk~cWah~paDRptFsair~~~~l~ 372 (1039)
T KOG0199|consen 336 RPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLA 372 (1039)
T ss_pred CCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHH
Confidence 5778888999999999999999999999997554443
No 359
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2e-34 Score=311.92 Aligned_cols=255 Identities=25% Similarity=0.287 Sum_probs=198.2
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceecC--C---
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACPE--Y--- 461 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~--- 461 (701)
...++|.+...||+|+||.||+|.+. +..||+|++..... .....+.+|+.+++.++|||++++++++.. .
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 35678999999999999999999984 56699998865422 223457789999999999999999887632 2
Q ss_pred ---CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeec
Q 005343 462 ---GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVG 538 (701)
Q Consensus 462 ---~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFG 538 (701)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEcccc
Confidence 57999998 7799888743 35899999999999999999999999 9999999999999999999999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---Hc-Cc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---RN-GT 613 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~~-~~ 613 (701)
++...... .....++..|+|||.+.+ ..++.++|||||||++|+|+||++||.........- .. +.
T Consensus 164 ~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~ 234 (343)
T cd07851 164 LARHTDDE---------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGT 234 (343)
T ss_pred cccccccc---------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCC
Confidence 99765321 234467899999998765 467899999999999999999999997554322111 10 00
Q ss_pred ccc-c---------------c----CccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 614 FSE-L---------------L----DPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 614 ~~~-~---------------l----d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
... + + .+.........+..+.+++.+||..+|.+||++.+++.|+|++-
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 000 0 0 00000000112456899999999999999999999999999973
No 360
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-33 Score=300.77 Aligned_cols=248 Identities=26% Similarity=0.356 Sum_probs=194.8
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEee
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEY 468 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 468 (701)
|...+.||+|+||.||+|.. .+..|++|++....... ...+.+|+++++.++|||++++++++.+ ..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 66678899999999999987 45669999986543322 2457889999999999999999999854 45899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
+. |+|.+.+... ..++++..+..++.||+.||.|||+.+ |+||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~--~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--- 173 (313)
T cd06633 103 CL-GSASDLLEVH--KKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP--- 173 (313)
T ss_pred CC-CCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC---
Confidence 95 6777777443 245889999999999999999999999 99999999999999999999999999864311
Q ss_pred cccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
.....|+..|+|||++. .+.++.++|||||||++|+|++|.+||...+........... ..+...
T Consensus 174 -------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~~-- 241 (313)
T cd06633 174 -------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN---DSPTLQ-- 241 (313)
T ss_pred -------CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc---CCCCCC--
Confidence 23456889999999874 456889999999999999999999998765433222211110 001111
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
....+..+.+++.+||+.+|.+||++.+++.|+|++...
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~ 280 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR 280 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence 011233589999999999999999999999999987533
No 361
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-35 Score=289.05 Aligned_cols=264 Identities=25% Similarity=0.376 Sum_probs=202.9
Q ss_pred cCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceec-----C----
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACP-----E---- 460 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~-----~---- 460 (701)
+.|.-..+||+|.||+||+|+..++ .||+|+.-.+. ..-.....+|+.+|..++|+|++.++..|. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 4567778999999999999998654 48887543322 233456789999999999999999998872 1
Q ss_pred -CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 461 -YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
..++||.+|+. +|..+|.. ....++..++.+++.++..||.|+|.+. |+|||+||.|+|++.+|.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn--~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSN--RKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcC--ccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeecccc
Confidence 13799999964 77776632 2356899999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HH--cCcc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IR--NGTF 614 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~--~~~~ 614 (701)
++.+..+. .....+.+..+.|++|++||.+.+ ..|+++.|||..|||+.||+||.|.|.+..+..+. |. -|++
T Consensus 171 ar~fs~~~--n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~ 248 (376)
T KOG0669|consen 171 ARAFSTSK--NVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSI 248 (376)
T ss_pred ccceeccc--ccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccC
Confidence 98775443 233344677888999999997665 45999999999999999999999999877544332 21 1222
Q ss_pred ccccCccCCCCCH------------------------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 615 SELLDPTVTGWPV------------------------EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 615 ~~~ld~~~~~~p~------------------------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
..-..|.....|. .......+|+.+++.+||.+||+..+++.|.||.--.+
T Consensus 249 tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~ 323 (376)
T KOG0669|consen 249 TKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPM 323 (376)
T ss_pred CcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCCc
Confidence 2222222211111 11125679999999999999999999999999985333
No 362
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.9e-33 Score=327.50 Aligned_cols=144 Identities=28% Similarity=0.404 Sum_probs=126.1
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceec--CCCceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACP--EYGCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV 465 (701)
.++|.+.++||+|+||.||+|.+. ++.||||++....... ...+..|+.++..++||||+++++.+. +..|||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367999999999999999999996 6779999987643222 356889999999999999999998874 455899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
|||+.+|+|.+++... ..+++...+.|+.||+.||.|||..+ ||||||||+||||+.++.+||+|||+++.
T Consensus 83 mEy~~g~~L~~li~~~---~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 83 MEYLIGGDVKSLLHIY---GYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred EeCCCCCCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999988543 35788899999999999999999998 99999999999999999999999999863
No 363
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-34 Score=298.66 Aligned_cols=252 Identities=25% Similarity=0.312 Sum_probs=202.2
Q ss_pred hcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCC---CChHHHHHHHHHHHhC-CCCcEEEEecee--cCCCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDIS---QGPRQFKQEVEILGSM-RHTNMVILLGAC--PEYGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~---~~~~~~~~Ei~il~~l-~HpnIv~l~g~~--~~~~~l 464 (701)
..+|..+..||+|+||.|-+|..+++. +|||+++++.. ++.+--..|-++|... +-|.++.|...| .+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 346888999999999999999998876 99999988752 2222234566666655 456677776665 456799
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||||+.||+|.-.+.+-+ .+.+.....++.+|+-||-|||+.+ ||+||||.+||+||.+|++||+|||+++--
T Consensus 428 VMEyvnGGDLMyhiQQ~G---kFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEn- 500 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVG---KFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEN- 500 (683)
T ss_pred EEEEecCchhhhHHHHhc---ccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeeccccccc-
Confidence 999999999988775543 4677788889999999999999999 999999999999999999999999999742
Q ss_pred CCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCccC
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPTV 622 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~~ 622 (701)
........+.|||+.|+|||++...+|+..+|||||||+|||||.|.|||.+.++ +-+.|.+.+
T Consensus 501 -----i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn--------- 566 (683)
T KOG0696|consen 501 -----IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN--------- 566 (683)
T ss_pred -----ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc---------
Confidence 1222234678999999999999999999999999999999999999999988764 333333322
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHHHhc
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRLRDL 665 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l~~~ 665 (701)
..+|...+.+...+....|...|.+|.. -.+|-+|++++--++
T Consensus 567 vsyPKslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDW 614 (683)
T KOG0696|consen 567 VSYPKSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDW 614 (683)
T ss_pred CcCcccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccH
Confidence 2466677777889999999999999864 467778877776554
No 364
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=1.2e-33 Score=301.14 Aligned_cols=246 Identities=26% Similarity=0.378 Sum_probs=194.6
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 467 (701)
.|...+.||+|+||.||+|+. .+..|++|.+...... ....+.+|+++++.++|||++++++++.+ ..++|||
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 95 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVME 95 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEE
Confidence 366778899999999999998 4556999988653222 23457889999999999999999998743 4589999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
|+. |+|.+.+.... .++++..+..++.|++.||.|||+.+ ++||||+|+|||++.++.+||+|||++......
T Consensus 96 ~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 96 YCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred ccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 996 68877664332 45889999999999999999999999 999999999999999999999999998765321
Q ss_pred CcccccccccccccCCCccCccccc---CCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHH--HHHcCccccccCccC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQ---TGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQ--AIRNGTFSELLDPTV 622 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~--~i~~~~~~~~ld~~~ 622 (701)
....|++.|+|||++. .+.++.++|||||||++|+|++|++||........ .+..+.. +..
T Consensus 169 ---------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~-----~~~ 234 (308)
T cd06634 169 ---------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES-----PAL 234 (308)
T ss_pred ---------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC-----CCc
Confidence 2346888999999864 35688899999999999999999999865443222 1222211 111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 623 TGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 623 ~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
. +...+..+.+++.+||..+|.+||++.+++.|+|+...
T Consensus 235 ~--~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~ 273 (308)
T cd06634 235 Q--SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (308)
T ss_pred C--cccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence 0 12334568999999999999999999999999998763
No 365
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=317.23 Aligned_cols=196 Identities=31% Similarity=0.481 Sum_probs=170.4
Q ss_pred CceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--------CCc
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--------YGC 463 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~ 463 (701)
.|...+.||+||||.||+|+++.+ .||||.++...... .+...+|+++|++++|||||+++++-.+ ...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 456667899999999999998544 59999998865433 4557899999999999999999987432 337
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC----CcEEEEeecc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN----YVSKISDVGL 539 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~----~~~KL~DFGl 539 (701)
+|||||.||||+.+|.+-.+...|++...+.++.+++.||.|||.++ |+||||||.||++-.+ -..||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999999988888889999999999999999999999999 9999999999999432 2459999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCccccc-CCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQ-TGMLGVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-~~~~~~~sDvwSlGvil~elltG~~pf~ 600 (701)
|+-++.+. .+.+.+||..|++||++. ...|+..+|.|||||++|++.||..||-
T Consensus 171 Arel~d~s-------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 171 ARELDDNS-------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cccCCCCC-------eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 99875432 468899999999999988 4889999999999999999999998884
No 366
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=7.9e-34 Score=298.74 Aligned_cols=255 Identities=24% Similarity=0.308 Sum_probs=197.1
Q ss_pred CceeeeeeeecCceeEEEEEE-----CCceEEEEEeCCCCC----CChHHHHHHHHHHHhC-CCCcEEEEeceecC--CC
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-----DHTSVAIKVLGPDIS----QGPRQFKQEVEILGSM-RHTNMVILLGACPE--YG 462 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~~----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~ 462 (701)
+|.+.+.||+|+||.||++.. +++.||||++..... .....+.+|+.++.++ +||||+++++.+.. ..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 478899999999999999985 346699999875321 2234588999999999 59999999988744 34
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||+.+|+|.+.+... ..+++.....++.|++.||.|||+.+ ++||||+|.||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQR---EHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhc---CCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECccccc
Confidence 7999999999999988543 35888999999999999999999998 99999999999999999999999999887
Q ss_pred cCCCCCcccccccccccccCCCccCcccccCCC--CCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCcccccc
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM--LGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELL 618 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~l 618 (701)
+..... .......|+..|++||.+.+.. .+.++||||||+++|+|+||..||...... ...+......
T Consensus 155 ~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--- 226 (288)
T cd05583 155 FLAEEE-----ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--- 226 (288)
T ss_pred cccccc-----cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc---
Confidence 543211 1123356899999999887665 788999999999999999999999643211 1111111100
Q ss_pred CccCCCCCHHHHHHHHHHHHHhhccCcCCCCCh---hhhhhHHHHHHHhc
Q 005343 619 DPTVTGWPVEAALSIAKLALQCCELRKRDRPDL---VSVVLPELIRLRDL 665 (701)
Q Consensus 619 d~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~---~~vl~~~~~~l~~~ 665 (701)
.....|...+..+.+++.+||+.+|.+||++ .+++.|+|++-.++
T Consensus 227 --~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~~ 274 (288)
T cd05583 227 --SKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGIDW 274 (288)
T ss_pred --cCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccCCH
Confidence 0112223344568999999999999999985 56689988765444
No 367
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-33 Score=302.61 Aligned_cols=265 Identities=23% Similarity=0.280 Sum_probs=197.0
Q ss_pred hcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCCCh---HHHHHHHHHHHhCCCCcEEEEeceecC--CCceE
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQGP---RQFKQEVEILGSMRHTNMVILLGACPE--YGCLV 465 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~~---~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 465 (701)
.+-|..++.||-|+||+|.+++-.+|. ||+|.|++...... ...+.|..||...+.+.||+||-.|.+ ..|+|
T Consensus 628 KSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 628 KSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 356899999999999999999876654 99999877543222 347889999999999999999999955 45899
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
|+|++||++..+|.+.+ -|++.....++.++.+|+++.|..| +|||||||+|||||.+|++||+|||||.-+..
T Consensus 708 MdYIPGGDmMSLLIrmg---IFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMG---IFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred EeccCCccHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeecccccccee
Confidence 99999999999997654 4788888889999999999999999 99999999999999999999999999953311
Q ss_pred CC-------Cccccc-----------------------------ccccccccCCCccCcccccCCCCCchhhHHHHHHHH
Q 005343 546 SA-------ADTITQ-----------------------------YHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVL 589 (701)
Q Consensus 546 ~~-------~~~~~~-----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil 589 (701)
.. .+...+ ......+||..|+|||++....|+..+||||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 00 000000 001257899999999999999999999999999999
Q ss_pred HHHHhCCCCCCCchHHHHHHHcCccccccCccC-CCCCHHHHHHHHHHH-HHhhccCcCC-CCChhhhhhHHHHHHHhcc
Q 005343 590 LQLITARPAMGLSHQVEQAIRNGTFSELLDPTV-TGWPVEAALSIAKLA-LQCCELRKRD-RPDLVSVVLPELIRLRDLG 666 (701)
Q Consensus 590 ~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~-~~~p~~~~~~l~~li-~~cl~~~P~~-RPt~~~vl~~~~~~l~~~~ 666 (701)
|||+.|++||-.....+...+--++...|+-.. .....+ ..++| ..|+.-+-+- +=-..+|-.|+||+--|+.
T Consensus 862 ~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e----~~~li~kLc~sad~RLGkng~d~vKaHpfFkgIDfs 937 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKE----ALDLIQKLCCSADSRLGKNGADQVKAHPFFKGIDFS 937 (1034)
T ss_pred HHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHH----HHHHHHHHhcChhhhhcccchhhhhcCccccccchH
Confidence 999999999965443333222223333333221 222333 33444 4455433322 2225568899999876654
Q ss_pred c
Q 005343 667 F 667 (701)
Q Consensus 667 ~ 667 (701)
.
T Consensus 938 s 938 (1034)
T KOG0608|consen 938 S 938 (1034)
T ss_pred h
Confidence 3
No 368
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-34 Score=328.98 Aligned_cols=257 Identities=28% Similarity=0.383 Sum_probs=194.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceec---------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACP--------- 459 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~--------- 459 (701)
..++|+.+..||+||||.||+++. +++.||||.+...... ....+.+|+..|++|+|||||.+|.+|-
T Consensus 477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ 556 (1351)
T KOG1035|consen 477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVL 556 (1351)
T ss_pred HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccc
Confidence 456788999999999999999987 8999999998776422 2345889999999999999998864210
Q ss_pred --------------------------------------------------------------------------------
Q 005343 460 -------------------------------------------------------------------------------- 459 (701)
Q Consensus 460 -------------------------------------------------------------------------------- 459 (701)
T Consensus 557 ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~ 636 (1351)
T KOG1035|consen 557 EIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDS 636 (1351)
T ss_pred cccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccccc
Confidence
Q ss_pred -----------------------C---------CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHh
Q 005343 460 -----------------------E---------YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLH 507 (701)
Q Consensus 460 -----------------------~---------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH 507 (701)
+ ..||-||||+...|.+++..+.... .....++++.+|++||.|+|
T Consensus 637 e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 637 EGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHHHHHH
Confidence 0 0145678887777777664433211 24556889999999999999
Q ss_pred hcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC-----------CCC-CcccccccccccccCCCccCcccccCCC
Q 005343 508 QNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP-----------PSA-ADTITQYHMTTAAGTFCYIDPEYQQTGM 575 (701)
Q Consensus 508 ~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~-----------~~~-~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 575 (701)
+.| ||||||||.||+|+.++.|||+|||+|.... +.. .........++.+||.-|+|||++.+..
T Consensus 715 ~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 DQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred hCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 999 9999999999999999999999999998721 000 0111222457889999999999987655
Q ss_pred ---CCchhhHHHHHHHHHHHHhCCCCCCCchHH---HHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCC
Q 005343 576 ---LGVKSDLYSLGVVLLQLITARPAMGLSHQV---EQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRP 649 (701)
Q Consensus 576 ---~~~~sDvwSlGvil~elltG~~pf~~~~~~---~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RP 649 (701)
|+.|+|+|||||||+||+. ||+..-+- -..++.|.+..- .++.......=+.+|.++++.||.+||
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-----~~f~~~~~~~e~slI~~Ll~hdP~kRP 863 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-----ADFFDPEHPEEASLIRWLLSHDPSKRP 863 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-----cccccccchHHHHHHHHHhcCCCccCC
Confidence 9999999999999999986 47655433 233344444322 233334444468999999999999999
Q ss_pred ChhhhhhHHHHH
Q 005343 650 DLVSVVLPELIR 661 (701)
Q Consensus 650 t~~~vl~~~~~~ 661 (701)
|+.++|.+.|+.
T Consensus 864 tA~eLL~s~llp 875 (1351)
T KOG1035|consen 864 TATELLNSELLP 875 (1351)
T ss_pred CHHHHhhccCCC
Confidence 999999887776
No 369
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.3e-33 Score=287.91 Aligned_cols=238 Identities=27% Similarity=0.302 Sum_probs=195.1
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ---GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
||.|+||.||++... ++.+++|++...... ....+..|+.+++.++||||+++++.+.. ..|+||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999984 567999998765432 34468999999999999999999998854 34899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQY 554 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~ 554 (701)
.+++... ..+++.....++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... .
T Consensus 81 ~~~l~~~---~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~------~ 148 (250)
T cd05123 81 FSHLSKE---GRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG------S 148 (250)
T ss_pred HHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC------C
Confidence 9998543 35889999999999999999999999 9999999999999999999999999987653321 1
Q ss_pred cccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH--HHHHHcCccccccCccCCCCCHHHHHH
Q 005343 555 HMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV--EQAIRNGTFSELLDPTVTGWPVEAALS 632 (701)
Q Consensus 555 ~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~--~~~i~~~~~~~~ld~~~~~~p~~~~~~ 632 (701)
......++..|++||.+.+..++.++|+||||+++|+|++|+.||...... ...+..+. ..+|...+..
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~ 219 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDP---------LRFPEFLSPE 219 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCC---------CCCCCCCCHH
Confidence 234557888999999998888999999999999999999999999765531 11222111 1223333556
Q ss_pred HHHHHHHhhccCcCCCCCh---hhhhhHHHH
Q 005343 633 IAKLALQCCELRKRDRPDL---VSVVLPELI 660 (701)
Q Consensus 633 l~~li~~cl~~~P~~RPt~---~~vl~~~~~ 660 (701)
+.+++.+||..+|.+||++ .+++.|+|+
T Consensus 220 l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 220 ARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 8999999999999999999 889888874
No 370
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=314.30 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=217.2
Q ss_pred HHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEecee-------c
Q 005343 390 EAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGAC-------P 459 (701)
Q Consensus 390 ~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~-------~ 459 (701)
-..++-|.+.+.||.|.||.||+++. .++.+|+|++..+. +..+++..|.+||+.+ .|||++.+||+| +
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 34567899999999999999999986 56779999998775 4456788899999887 799999999997 4
Q ss_pred CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 460 EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 460 ~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
+..+||||||.+||..|+..... ...+.|..+..|+..++.||.+||.+. +||||||=.||||+.++.|||.|||+
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGv 169 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGV 169 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeee
Confidence 55699999999999999886655 678999999999999999999999999 99999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCC-----CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCcc
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG-----MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTF 614 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~ 614 (701)
+..+. .+..+..+.+||++|||||++... .|+.++|+||||++..||--|.||+-..+.+...+.-..-
T Consensus 170 SaQld------sT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRN 243 (953)
T KOG0587|consen 170 SAQLD------STVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN 243 (953)
T ss_pred eeeee------cccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCC
Confidence 98763 344456788999999999976543 3888999999999999999999999888877666543321
Q ss_pred ccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 615 SELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 615 ~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
-.|.+. -|..-..+|.++|..||..+-..||++.++|.|+|.+
T Consensus 244 ---PPPkLk-rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~ 286 (953)
T KOG0587|consen 244 ---PPPKLK-RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFIT 286 (953)
T ss_pred ---CCcccc-chhhHHHHHHHHHHHHHhhccccCcchhhhccCCccc
Confidence 112221 2445566799999999999999999999999998865
No 371
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.9e-35 Score=335.17 Aligned_cols=254 Identities=25% Similarity=0.307 Sum_probs=201.2
Q ss_pred CceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey 468 (701)
+|.-...||.|.||.||.|...+++ .|+|-++..... ......+|+.+|..++|||+|.+||+= .+..+|.|||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEy 1315 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEY 1315 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHH
Confidence 4666778999999999999986655 788876554432 334578999999999999999999984 5566899999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|++|+|.+.+.. +.-.++.....+..|++.||.|||++| ||||||||.||||+.+|.+|++|||.|..+.+...
T Consensus 1316 C~~GsLa~ll~~---gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~ 1389 (1509)
T KOG4645|consen 1316 CEGGSLASLLEH---GRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ 1389 (1509)
T ss_pred hccCcHHHHHHh---cchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEecCchh
Confidence 999999998833 233556666778899999999999999 99999999999999999999999999998866531
Q ss_pred cccccccccccccCCCccCcccccCCC---CCchhhHHHHHHHHHHHHhCCCCCCC-chHHHHHHHcCccccccCccCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGM---LGVKSDLYSLGVVLLQLITARPAMGL-SHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~sDvwSlGvil~elltG~~pf~~-~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
. .........||+.|||||++.+.. .+.+.||||+||+.+||+||+.||.. ++...-+..-+. ...+.
T Consensus 1390 ~--~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~------gh~Pq 1461 (1509)
T KOG4645|consen 1390 T--MPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA------GHKPQ 1461 (1509)
T ss_pred c--CCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhc------cCCCC
Confidence 1 123345789999999999886544 56789999999999999999999853 333322222221 11234
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.|...+.+-.+|+..||..||+.|=++.++++|.|-+-
T Consensus 1462 ~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1462 IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence 45556667889999999999999999989998877664
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-34 Score=285.40 Aligned_cols=254 Identities=23% Similarity=0.355 Sum_probs=204.1
Q ss_pred eeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecC--CCceEEeecCCCCh
Q 005343 400 RKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPE--YGCLVYEYMENGSL 474 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 474 (701)
+.||+|+|+.|-.+.. .+..+|||++.+........+.+|++++..+ .|+||+.|+.+|.+ .+|||||-|.||+|
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGpl 163 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPL 163 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchH
Confidence 5799999999998876 5667999999988767778899999999998 59999999999965 45899999999999
Q ss_pred hhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC---cEEEEeeccccccCCCC-Ccc
Q 005343 475 EDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY---VSKISDVGLARLVPPSA-ADT 550 (701)
Q Consensus 475 ~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~---~~KL~DFGla~~~~~~~-~~~ 550 (701)
...+.++. -|++.+..++..+|+.||.|||..| |.||||||+|||..... -+|||||.|..-+.... ...
T Consensus 164 LshI~~~~---~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 164 LSHIQKRK---HFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred HHHHHHhh---hccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 99886654 4888899999999999999999999 99999999999996543 46999999876542111 112
Q ss_pred cccccccccccCCCccCcccc-----cCCCCCchhhHHHHHHHHHHHHhCCCCCCCch-----------------HHHHH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQ-----QTGMLGVKSDLYSLGVVLLQLITARPAMGLSH-----------------QVEQA 608 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~-----~~~~~~~~sDvwSlGvil~elltG~~pf~~~~-----------------~~~~~ 608 (701)
.......+.+|+..|||||+. ....|+.++|.||||||||-||.|++||.+.. .+-..
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFes 317 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFES 317 (463)
T ss_pred CCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHH
Confidence 334456788999999999953 23469999999999999999999999996432 22334
Q ss_pred HHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 609 IRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 609 i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
|.+|.+. +-|. +| ...+.+..+++...+-.++.+|-++.+++.|+|.+.+.
T Consensus 318 IQEGkYe-FPdk---dW-ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 318 IQEGKYE-FPDK---DW-AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HhccCCc-CChh---hh-HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 5556542 1111 22 23345578899999999999999999999999998654
No 373
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=303.62 Aligned_cols=250 Identities=21% Similarity=0.276 Sum_probs=211.0
Q ss_pred CceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCCC---hHHHHHHHHHHHhCCCCcEEEEeceecCC--CceEEe
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQG---PRQFKQEVEILGSMRHTNMVILLGACPEY--GCLVYE 467 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~~--~~lV~E 467 (701)
++..+..||-||||.|=++..++.. +|+|++++...-+ .+.+..|-.||..++.|.||+||..|.+. .|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 3455678999999999999987665 8888887654332 34588899999999999999999999664 478999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
-|-||.|+..|..++ .|...+...++..+++|+.|||+++ ||+|||||+|++|+.+|-+||.|||+|+.+..+
T Consensus 501 aClGGElWTiLrdRg---~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g- 573 (732)
T KOG0614|consen 501 ACLGGELWTILRDRG---SFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG- 573 (732)
T ss_pred hhcCchhhhhhhhcC---CcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC-
Confidence 999999999995543 4777778889999999999999999 999999999999999999999999999987543
Q ss_pred CcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHH--HHHHcCccccccCccCCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVE--QAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~--~~i~~~~~~~~ld~~~~~~ 625 (701)
.+.+++|||+.|.|||++.+...+..+|.||||+++||||||.|||...+.+. +.|-.|. ....|
T Consensus 574 ------~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi-------d~i~~ 640 (732)
T KOG0614|consen 574 ------RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI-------DKIEF 640 (732)
T ss_pred ------CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh-------hhhhc
Confidence 24578999999999999999999999999999999999999999999887653 3344442 11357
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCC-----hhhhhhHHHHHHHh
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPD-----LVSVVLPELIRLRD 664 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt-----~~~vl~~~~~~l~~ 664 (701)
|...+....+++.+.|..+|.+|.. +.+|=.|.|+.=-+
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd 684 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD 684 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence 7777778899999999999999987 88999998887433
No 374
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-33 Score=279.37 Aligned_cols=251 Identities=23% Similarity=0.330 Sum_probs=193.3
Q ss_pred eeeeeeecCceeEEEEEECC--ceEEEEEeCCCCC-CChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEEeecCC
Q 005343 398 ISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDIS-QGPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
.+..||.|..|.||++++.. +-.|||.+..... ...+.+...+.++...+ .|+||+.+|+|-. ..++-||.| +
T Consensus 96 ~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM-s 174 (391)
T KOG0983|consen 96 NLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM-S 174 (391)
T ss_pred hHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-H
Confidence 45679999999999999966 5589998876542 33456778888876664 8999999999843 347888888 3
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
.-++.+|.+ ...++++...-++..-++.||.||.... .|||||+||+|||+|..|.+||||||++..+-.+.
T Consensus 175 ~C~ekLlkr--ik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk---- 246 (391)
T KOG0983|consen 175 TCAEKLLKR--IKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK---- 246 (391)
T ss_pred HHHHHHHHH--hcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeecccccceeeccc----
Confidence 334444432 2346899999999999999999999765 39999999999999999999999999997764433
Q ss_pred ccccccccccCCCccCcccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHcCccccccCccCCCC
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQT---GMLGVKSDLYSLGVVLLQLITARPAMGLSH---QVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDvwSlGvil~elltG~~pf~~~~---~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
..+..+|-+.|||||.+.. ..|+.++||||||+.|+||.||..||.+-+ ++-..+.+. ....++...
T Consensus 247 ---AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~-ePP~L~~~~--- 319 (391)
T KOG0983|consen 247 ---AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE-EPPLLPGHM--- 319 (391)
T ss_pred ---ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc-CCCCCCccc---
Confidence 2356689999999997754 469999999999999999999999997633 222223221 112222211
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcc
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLG 666 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~ 666 (701)
..+..|.+|+..||+.|+++||...++|.|+|.+..+.+
T Consensus 320 --gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye~a 358 (391)
T KOG0983|consen 320 --GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYETA 358 (391)
T ss_pred --CcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecchh
Confidence 145569999999999999999999999999998876644
No 375
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.3e-32 Score=336.73 Aligned_cols=247 Identities=26% Similarity=0.412 Sum_probs=192.1
Q ss_pred cCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeec
Q 005343 394 DYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYM 469 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 469 (701)
..|.....||+|+||.||+|.+ .+..||||.+..... ....|++++++++|||||+++|+|.+ ..++||||+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~ 765 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI 765 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence 4567778999999999999997 566799998864432 12456899999999999999999944 458999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~ 549 (701)
++|+|.+++. .++|..+.+|+.|++.||.|||.....+|+||||||+||+++.++..++. ||.......
T Consensus 766 ~~g~L~~~l~------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 766 EGKNLSEVLR------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred CCCcHHHHHh------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 9999999983 37899999999999999999996544459999999999999999988876 666543311
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch----H----HHHHHHcCccccccCcc
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH----Q----VEQAIRNGTFSELLDPT 621 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~----~----~~~~i~~~~~~~~ld~~ 621 (701)
.....||+.|+|||++.+..++.++|||||||++|||+||++||.... . ..............++.
T Consensus 835 ------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (968)
T PLN00113 835 ------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPS 908 (968)
T ss_pred ------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCcc
Confidence 123368899999999999999999999999999999999999985321 1 11111122233344444
Q ss_pred CCC---CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 622 VTG---WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 622 ~~~---~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
... .+......+.+++.+||+.+|.+||++.+++.. +.++
T Consensus 909 ~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~-L~~~ 951 (968)
T PLN00113 909 IRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT-LESA 951 (968)
T ss_pred ccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH-HHHh
Confidence 422 234555678899999999999999999999753 4443
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.8e-33 Score=283.80 Aligned_cols=225 Identities=23% Similarity=0.180 Sum_probs=179.2
Q ss_pred cCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCChhhHhcc
Q 005343 405 GGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSLEDRLFQ 480 (701)
Q Consensus 405 G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~ 480 (701)
|.||.||++.+ .++.||+|.+.... .+.+|...+....||||+++++++.+ ..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 89999999998 45569999987643 23455566666789999999998744 45899999999999998854
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccc
Q 005343 481 KDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAA 560 (701)
Q Consensus 481 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~ 560 (701)
. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++..+... .....
T Consensus 79 ~---~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---------~~~~~ 143 (237)
T cd05576 79 F---LNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---------CDGEA 143 (237)
T ss_pred h---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc---------cccCC
Confidence 3 34899999999999999999999999 999999999999999999999999988655321 12335
Q ss_pred cCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHh
Q 005343 561 GTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQC 640 (701)
Q Consensus 561 gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~c 640 (701)
++..|+|||......++.++||||+||++|+|++|++|+...... +.. . .....|...+..+.+++.+|
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~---~~~--~------~~~~~~~~~~~~~~~li~~~ 212 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG---INT--H------TTLNIPEWVSEEARSLLQQL 212 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh---ccc--c------cccCCcccCCHHHHHHHHHH
Confidence 677899999998888999999999999999999999887533211 000 0 00112333445689999999
Q ss_pred hccCcCCCCCh-----hhhhhHHHH
Q 005343 641 CELRKRDRPDL-----VSVVLPELI 660 (701)
Q Consensus 641 l~~~P~~RPt~-----~~vl~~~~~ 660 (701)
|+.+|.+||++ .+++.|+|+
T Consensus 213 l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 213 LQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred ccCCHHHhcCCCccchHHHHcCCCC
Confidence 99999999996 777877763
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-33 Score=260.65 Aligned_cols=255 Identities=25% Similarity=0.338 Sum_probs=193.9
Q ss_pred CceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEee
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEY 468 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey 468 (701)
.|.-.++||+|.||+||+|+..++. ||+|..+.+..+ .+....+||-+|+.++|.|||.+++... ...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3556688999999999999986654 999988776533 3567899999999999999999999863 334699999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|. .+|..++..- +..+..+....++.|++.||.|+|+++ ++||||||.|+|++.||.+||+|||+++-+.-..
T Consensus 83 cd-qdlkkyfdsl--ng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv- 155 (292)
T KOG0662|consen 83 CD-QDLKKYFDSL--NGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV- 155 (292)
T ss_pred hh-HHHHHHHHhc--CCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce-
Confidence 94 5777766433 346888999999999999999999999 9999999999999999999999999999764322
Q ss_pred cccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHH----cCccccccCccC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVEQAIR----NGTFSELLDPTV 622 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~i~----~~~~~~~ld~~~ 622 (701)
.-.+..+.|.||++|.++-+. -|++..|+||.|||+.|+.. |+|.|.+.+-.++..+ -|...+-..|+.
T Consensus 156 -----rcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~ 230 (292)
T KOG0662|consen 156 -----RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSM 230 (292)
T ss_pred -----EeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCcc
Confidence 123556889999999976655 48999999999999999976 7788876653333222 122211111111
Q ss_pred CC---------CCH-----HHH----HHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 623 TG---------WPV-----EAA----LSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 623 ~~---------~p~-----~~~----~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.. +|. ..- ..=.+++...+.-+|..|.++...+.|+.+.
T Consensus 231 t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~ 287 (292)
T KOG0662|consen 231 TKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFS 287 (292)
T ss_pred ccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccc
Confidence 11 111 000 1135788888999999999999999887764
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-33 Score=303.54 Aligned_cols=237 Identities=25% Similarity=0.318 Sum_probs=196.0
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecCCC--ceEEe
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPEYG--CLVYE 467 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~~--~lV~E 467 (701)
++.|.+...+|.|+||.|-.+.+ .++..++|++.... .+..+|+.++... .||||+++.+.|.+.. ++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 56788889999999999999988 45569999987662 2346677666555 7999999999996654 89999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeE-cCCCcEEEEeeccccccCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILL-DQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl-~~~~~~KL~DFGla~~~~~~ 546 (701)
++.||-|.+.+.... .+. ..+..|+.+|+.|+.|||..| +|||||||+|||+ ++.++++|+|||.++....+
T Consensus 397 ~l~g~ell~ri~~~~---~~~-~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~ 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP---EFC-SEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS 469 (612)
T ss_pred hccccHHHHHHHhcc---hhH-HHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence 999999888775433 233 677789999999999999999 9999999999999 68999999999999877543
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHcCccccccCccCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH---QVEQAIRNGTFSELLDPTVT 623 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~---~~~~~i~~~~~~~~ld~~~~ 623 (701)
+.+.+-|..|.|||++....|+..+||||||++||+||+|+.||.... +....+..+.+.
T Consensus 470 ---------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s-------- 532 (612)
T KOG0603|consen 470 ---------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS-------- 532 (612)
T ss_pred ---------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--------
Confidence 345577899999999999999999999999999999999999996432 233334444332
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
...+....+|+.+||+.+|.+||++.++..|+|+
T Consensus 533 ---~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 533 ---ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred ---cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 2344568999999999999999999999999999
No 379
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=3e-33 Score=295.88 Aligned_cols=246 Identities=24% Similarity=0.383 Sum_probs=206.2
Q ss_pred eeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEeecCCC
Q 005343 399 SRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYEYMENG 472 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey~~~g 472 (701)
.+.||.|-||+||-|.++ ++.||||++.+... ....++.+|+.||..++||.||.|--.| ++..+.|||-+ +|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl-~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKL-HG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhh-cc
Confidence 368999999999999985 55699999876542 2346799999999999999999998887 45668999999 56
Q ss_pred ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC---CcEEEEeeccccccCCCCCc
Q 005343 473 SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN---YVSKISDVGLARLVPPSAAD 549 (701)
Q Consensus 473 sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~---~~~KL~DFGla~~~~~~~~~ 549 (701)
+..+++..... ..|++.....++.||+.||.|||..+ |+|.||||+||||... -.+||||||+|+.+....
T Consensus 648 DMLEMILSsEk-gRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks-- 721 (888)
T KOG4236|consen 648 DMLEMILSSEK-GRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS-- 721 (888)
T ss_pred hHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchhh--
Confidence 77676655433 45888888889999999999999999 9999999999999643 478999999999985432
Q ss_pred ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHH
Q 005343 550 TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEA 629 (701)
Q Consensus 550 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~ 629 (701)
...+.+||+.|+|||++.+..|+..-|+||.|||+|--|+|.-||+-+.++...|.+..|..-- ..| .+.
T Consensus 722 -----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp----~PW-~ei 791 (888)
T KOG4236|consen 722 -----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPP----NPW-SEI 791 (888)
T ss_pred -----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhccccccCC----Cch-hhc
Confidence 2467899999999999999999999999999999999999999999988888888877653221 123 344
Q ss_pred HHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 630 ALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 630 ~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.....+||...|+..-+.|.+....+-|.|.+
T Consensus 792 s~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq 823 (888)
T KOG4236|consen 792 SPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQ 823 (888)
T ss_pred CHHHHHHHHHHHHHHHHHhcchHhhccchhhh
Confidence 55688999999999999999999999998765
No 380
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-34 Score=281.87 Aligned_cols=258 Identities=24% Similarity=0.287 Sum_probs=199.6
Q ss_pred eeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecC-C-CceEEeecCC
Q 005343 398 ISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPE-Y-GCLVYEYMEN 471 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-~-~~lV~Ey~~~ 471 (701)
-+..||.|+||+|+|-.++ ++..|||.++.... ....++..|.+...+- +.||||++||++.. . .++-||+| .
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-D 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-h
Confidence 3567999999999999985 45599999987664 3445688888876554 79999999999743 3 36899999 4
Q ss_pred CChhhHhccc---CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 472 GSLEDRLFQK---DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 472 gsL~~~l~~~---~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
.||+.+. +. -....+++...-.|......||.||...- .|||||+||+||||+..|.+||||||++..+..+.
T Consensus 147 ~SlDklY-k~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si- 222 (361)
T KOG1006|consen 147 ISLDKLY-KRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI- 222 (361)
T ss_pred hhHHHHH-HHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHhHHHHH-
Confidence 5665433 21 22346888888899999999999998642 29999999999999999999999999998764443
Q ss_pred cccccccccccccCCCccCcccccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH---HHcCccccccCccCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTG--MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA---IRNGTFSELLDPTVT 623 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~---i~~~~~~~~ld~~~~ 623 (701)
..+.-+|-..|||||.+... .|+.++||||||++|||+.||+.|+...+.+-.. +-.|....++.+.-
T Consensus 223 ------AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~- 295 (361)
T KOG1006|consen 223 ------AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKE- 295 (361)
T ss_pred ------HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCccc-
Confidence 23556888999999976543 4899999999999999999999999876654332 33454443332211
Q ss_pred CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhccccc
Q 005343 624 GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFEN 669 (701)
Q Consensus 624 ~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~ 669 (701)
.......+..++..||..+..+||...++..+.|.++.......
T Consensus 296 --~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~ 339 (361)
T KOG1006|consen 296 --CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPD 339 (361)
T ss_pred --ccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCc
Confidence 12356679999999999999999999999999999987765444
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-33 Score=287.82 Aligned_cols=257 Identities=23% Similarity=0.290 Sum_probs=198.5
Q ss_pred HhhcCceeeeeeeecCceeEEEEEECCc--eEEEEEeCCCCCCChHHHHHHHHHHHhCCC--C----cEEEEeceec--C
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDISQGPRQFKQEVEILGSMRH--T----NMVILLGACP--E 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~~~~~~~~~~Ei~il~~l~H--p----nIv~l~g~~~--~ 460 (701)
..+++|.+..++|+|.||.|-.+.+..+ .||||+++.- ....+...-|+++|.++.+ | -+|++.++|. .
T Consensus 86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg 164 (415)
T KOG0671|consen 86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG 164 (415)
T ss_pred ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC
Confidence 3478999999999999999999988544 5999988643 2344557789999999942 3 2677777764 3
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC------------
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ------------ 528 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~------------ 528 (701)
+.|+|+|.+ |-|+.++|.. ++..+++...+..|+.|++.++.|||+.+ ++|.||||+|||+.+
T Consensus 165 hiCivfell-G~S~~dFlk~-N~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 165 HICIVFELL-GLSTFDFLKE-NNYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred ceEEEEecc-ChhHHHHhcc-CCccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence 458999999 7799999844 45678999999999999999999999999 999999999999921
Q ss_pred --------CCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005343 529 --------NYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 529 --------~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 600 (701)
+..+||+|||.|++-.. ..+..+.|..|+|||++.+-.++.++||||+||||+||.||...|.
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e---------~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHE---------HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred cceeccCCCcceEEEecCCcceecc---------CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 34679999999976422 2367789999999999999999999999999999999999998887
Q ss_pred CchHHH------HHH-----------------HcCccc-----------cccCccCC-----CCCHHHHHHHHHHHHHhh
Q 005343 601 LSHQVE------QAI-----------------RNGTFS-----------ELLDPTVT-----GWPVEAALSIAKLALQCC 641 (701)
Q Consensus 601 ~~~~~~------~~i-----------------~~~~~~-----------~~ld~~~~-----~~p~~~~~~l~~li~~cl 641 (701)
..+..+ .++ ..|.+. ...++..+ .....+...|.+|+.+||
T Consensus 311 tHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL 390 (415)
T KOG0671|consen 311 THENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRML 390 (415)
T ss_pred cCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHH
Confidence 544211 110 111000 00000000 001234557999999999
Q ss_pred ccCcCCCCChhhhhhHHHHHH
Q 005343 642 ELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 642 ~~~P~~RPt~~~vl~~~~~~l 662 (701)
..||.+|+|+.++|.|+||..
T Consensus 391 ~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 391 EFDPARRITLREALSHPFFAR 411 (415)
T ss_pred ccCccccccHHHHhcCHHhhc
Confidence 999999999999999999975
No 382
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-32 Score=286.59 Aligned_cols=250 Identities=28% Similarity=0.461 Sum_probs=191.4
Q ss_pred cCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHh--CCCCcEEEEeceec--C----CCceE
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGS--MRHTNMVILLGACP--E----YGCLV 465 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~g~~~--~----~~~lV 465 (701)
....+.++||+|.||.||||.+.++.||||++.. .....|+.|-+|.+. ++|+||+.++++-. + ..+||
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~---~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE---QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred CchhhHHHhhcCccceeehhhccCceeEEEecCH---HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 3455677899999999999999999999999875 445678888888776 48999999998852 1 34799
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCC------CCeeecCCCCCCeeEcCCCcEEEEeecc
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKP------EPLVHRDLKPANILLDQNYVSKISDVGL 539 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~------~~iiHrDLKp~NILl~~~~~~KL~DFGl 539 (701)
++|.+.|+|.++|.. ..++|....+|+..++.||+|||.--| .+|+|||||+.||||.+++++.|+||||
T Consensus 287 t~fh~kGsL~dyL~~----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKA----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeeccCCcHHHHHHh----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 999999999999944 458999999999999999999997544 3699999999999999999999999999
Q ss_pred ccccCCCCCcccccccccccccCCCccCcccccCCC------CCchhhHHHHHHHHHHHHhCCCC--------CCCc---
Q 005343 540 ARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM------LGVKSDLYSLGVVLLQLITARPA--------MGLS--- 602 (701)
Q Consensus 540 a~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~------~~~~sDvwSlGvil~elltG~~p--------f~~~--- 602 (701)
|..+++..... ..-..+||..|||||++.+-. --.++||||+|.|||||++.-.. |...
T Consensus 363 Al~~~p~~~~~----d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 363 ALRLEPGKPQG----DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred eEEecCCCCCc----chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99987654332 234489999999999876533 22479999999999999985422 2211
Q ss_pred --------hHHHHH-HHcCccccccCccCC-CCCH-HHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 603 --------HQVEQA-IRNGTFSELLDPTVT-GWPV-EAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 603 --------~~~~~~-i~~~~~~~~ld~~~~-~~p~-~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.++... +++... |.+. .|.. .....+.+.+..||..||+.|.|+.-+-+..+
T Consensus 439 evG~hPt~e~mq~~VV~kK~R-----P~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQR-----PKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccC-----CCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 112221 122111 1111 1221 23345899999999999999999987754433
No 383
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.2e-31 Score=269.80 Aligned_cols=236 Identities=29% Similarity=0.380 Sum_probs=192.4
Q ss_pred CceeEEEEEEC--CceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCChhhHhcc
Q 005343 406 GYGPVYKAQLD--HTSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSLEDRLFQ 480 (701)
Q Consensus 406 ~fg~Vyk~~~~--~~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~ 480 (701)
+||.||+|... +..+++|++....... ...+.+|++.+++++|+|++++++.+.. ..+++|||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 68999999985 4779999998765544 6789999999999999999999999853 45899999999999998854
Q ss_pred cCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccc
Q 005343 481 KDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAA 560 (701)
Q Consensus 481 ~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~ 560 (701)
.. .+++..+..++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||++....... ......
T Consensus 81 ~~---~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~~~ 147 (244)
T smart00220 81 RG---RLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-------LLTTFV 147 (244)
T ss_pred cc---CCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc-------cccccc
Confidence 32 2889999999999999999999999 9999999999999999999999999998764321 234556
Q ss_pred cCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHH---HcCccccccCccCCCCCHHHHHHHHHHH
Q 005343 561 GTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAI---RNGTFSELLDPTVTGWPVEAALSIAKLA 637 (701)
Q Consensus 561 gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i---~~~~~~~~ld~~~~~~p~~~~~~l~~li 637 (701)
++..|++||.+....++.++||||||+++|+|++|.+||.......... ..+... ..... ...+..+.+++
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~i 221 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPP----FPPPE--WKISPEAKDLI 221 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCC----Ccccc--ccCCHHHHHHH
Confidence 8889999999988889999999999999999999999997632222222 222111 00000 00345689999
Q ss_pred HHhhccCcCCCCChhhhhhHHHH
Q 005343 638 LQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 638 ~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
.+|+..+|.+||++.+++.|+|+
T Consensus 222 ~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 222 RKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHccCCchhccCHHHHhhCCCC
Confidence 99999999999999999998874
No 384
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-32 Score=297.16 Aligned_cols=279 Identities=25% Similarity=0.364 Sum_probs=221.8
Q ss_pred eeeeeeeecCceeEEEEEE--CC----ceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecCC-CceEEee
Q 005343 397 SISRKIGEGGYGPVYKAQL--DH----TSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPEY-GCLVYEY 468 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~--~~----~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~-~~lV~Ey 468 (701)
+..+.||.|+||+||+|.+ ++ -+||||++...... ...++..|+-+|.+++|||+++|+|+|... .-||++|
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~ 778 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQL 778 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHh
Confidence 3457899999999999998 32 35999998766433 356799999999999999999999999654 4689999
Q ss_pred cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCC
Q 005343 469 MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAA 548 (701)
Q Consensus 469 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~ 548 (701)
|+.|.|.|++..+. ..+..+..+.|..||++||.|||... +|||||-..|||+..-.++||.|||+++++.+..
T Consensus 779 mP~G~LlDyvr~hr--~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~- 852 (1177)
T KOG1025|consen 779 MPLGCLLDYVREHR--DNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE- 852 (1177)
T ss_pred cccchHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCccc-
Confidence 99999999996643 45778888999999999999999999 9999999999999999999999999999987653
Q ss_pred cccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCc--hHHHHHHHcCccccccCccCCCC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLS--HQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~--~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
..|......-.+-|||-|.+....|+.++|||||||++||++| |..|+.+. .++...++.|.. ...
T Consensus 853 ---~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geR--------Lsq 921 (1177)
T KOG1025|consen 853 ---KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGER--------LSQ 921 (1177)
T ss_pred ---ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcccc--------CCC
Confidence 3344444455678999999999999999999999999999998 77777543 345556665532 356
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH-HhcccccccCCCCCcccCCCCCCChhhhhhccc
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL-RDLGFENAENKNDNIVVTPGPYNSVSEMKQVSG 695 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (701)
|..++..+.-++.+||..|+..||++.++.. +|.++ ++.. . ....++.....|+|.++..+..+..-
T Consensus 922 PpiCtiDVy~~mvkCwmid~~~rp~fkel~~-~fs~~ardpq-r-yl~i~~~~~~~~s~~~~~~~~~~~~~ 989 (1177)
T KOG1025|consen 922 PPICTIDVYMVMVKCWMIDADSRPTFKELAE-EFSRMARDPQ-R-YLVIQDERMILPSPESSLFYRELLEE 989 (1177)
T ss_pred CCCccHHHHHHHHHHhccCcccCccHHHHHH-HHHHHhcCcc-e-EeeehhhcCCCCCCCcchHHHHhhHH
Confidence 7788888999999999999999999998754 45444 3321 1 11222445667888777776655443
No 385
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-31 Score=280.28 Aligned_cols=273 Identities=23% Similarity=0.327 Sum_probs=205.7
Q ss_pred HhhhcccccccCHHHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCC----
Q 005343 374 MAYKNVRYRKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMR---- 447 (701)
Q Consensus 374 ~~~~~~~~~~~~~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~---- 447 (701)
..|....|....+-|.. ..++|.+.++||+|.|++||++.+ ..+.||+|+.+.. ....+....||.+|++++
T Consensus 59 ~dY~kGGYHpV~IGD~F-~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp 136 (590)
T KOG1290|consen 59 EDYRKGGYHPVRIGDVF-NGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDP 136 (590)
T ss_pred hhhhcCCCceeeccccc-cCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCC
Confidence 34666788877776642 237899999999999999999988 5567999998643 244566788999999984
Q ss_pred -C---CcEEEEeceecC------CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeec
Q 005343 448 -H---TNMVILLGACPE------YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHR 517 (701)
Q Consensus 448 -H---pnIv~l~g~~~~------~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHr 517 (701)
| .+||+|++.|.. +.|||+|++ |-+|..++.. .....++...+..|+.||+.||.|||... +|||.
T Consensus 137 ~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~-s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHT 212 (590)
T KOG1290|consen 137 NDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKY-SNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHT 212 (590)
T ss_pred CCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHH-hCCCCCcHHHHHHHHHHHHHHHHHHHHhc--Ccccc
Confidence 3 369999999833 449999999 8888887744 45567999999999999999999999865 39999
Q ss_pred CCCCCCeeEcCC-----------C--------------------------------------------------------
Q 005343 518 DLKPANILLDQN-----------Y-------------------------------------------------------- 530 (701)
Q Consensus 518 DLKp~NILl~~~-----------~-------------------------------------------------------- 530 (701)
||||+||||..+ +
T Consensus 213 DlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~ 292 (590)
T KOG1290|consen 213 DLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLE 292 (590)
T ss_pred CCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccc
Confidence 999999998211 0
Q ss_pred --------------------------------------------------------------------------------
Q 005343 531 -------------------------------------------------------------------------------- 530 (701)
Q Consensus 531 -------------------------------------------------------------------------------- 530 (701)
T Consensus 293 ~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~ 372 (590)
T KOG1290|consen 293 GIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPG 372 (590)
T ss_pred cccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcc
Confidence
Q ss_pred -------------------cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHH
Q 005343 531 -------------------VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQ 591 (701)
Q Consensus 531 -------------------~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~e 591 (701)
.+||+|||-|+|+. ..++.-+.|..|+|||++.+..|++.+||||++|++||
T Consensus 373 ~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~---------khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FE 443 (590)
T KOG1290|consen 373 TIASNPLVNPDIPLPECDIRVKIADLGNACWVH---------KHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFE 443 (590)
T ss_pred ccccccccCCCCCCCccceeEEEeeccchhhhh---------hhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHH
Confidence 12344444443321 12345567889999999999999999999999999999
Q ss_pred HHhCCCCCCCc---------hHH-----------HHHHHcCc-----------cccc--cCcc--------CCCCCHHHH
Q 005343 592 LITARPAMGLS---------HQV-----------EQAIRNGT-----------FSEL--LDPT--------VTGWPVEAA 630 (701)
Q Consensus 592 lltG~~pf~~~---------~~~-----------~~~i~~~~-----------~~~~--ld~~--------~~~~p~~~~ 630 (701)
|+||...|.-. +.+ ..+...|+ +..+ |.+. ...|+.+.+
T Consensus 444 LaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A 523 (590)
T KOG1290|consen 444 LATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDA 523 (590)
T ss_pred hhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHH
Confidence 99999777411 111 11122222 2211 1110 135778888
Q ss_pred HHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 631 LSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 631 ~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
.+|.+|+.-||+.+|+.|||+.+.|.|+|+.
T Consensus 524 ~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn 554 (590)
T KOG1290|consen 524 QQFSDFLSPMLEFDPEKRPTAAQCLKHPWLN 554 (590)
T ss_pred HHHHHHHHHHHhcCccccccHHHHhcCcccc
Confidence 9999999999999999999999999999986
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=4.1e-31 Score=296.12 Aligned_cols=261 Identities=19% Similarity=0.201 Sum_probs=183.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEE------------------CCceEEEEEeCCCCCCChHH--------------HHHH
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL------------------DHTSVAIKVLGPDISQGPRQ--------------FKQE 439 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~------------------~~~~vAiK~l~~~~~~~~~~--------------~~~E 439 (701)
..++|.+.++||+|+||.||+|.+ .++.||||.+.......... +..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 367899999999999999999964 23459999987543322222 3447
Q ss_pred HHHHHhCCCCcE-----EEEeceec----------CCCceEEeecCCCChhhHhcccCC---------------------
Q 005343 440 VEILGSMRHTNM-----VILLGACP----------EYGCLVYEYMENGSLEDRLFQKDN--------------------- 483 (701)
Q Consensus 440 i~il~~l~HpnI-----v~l~g~~~----------~~~~lV~Ey~~~gsL~~~l~~~~~--------------------- 483 (701)
+.++.+++|.++ +.++|+|. ...+|||||+.+|+|.+++.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777778876654 56677763 234899999999999998864211
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCC
Q 005343 484 SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTF 563 (701)
Q Consensus 484 ~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~ 563 (701)
...+++..+..++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||++..+..... .......+|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-----~~~~~g~~tp 374 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-----FNPLYGMLDP 374 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-----cCccccCCCc
Confidence 123567788999999999999999999 99999999999999999999999999976532211 1112234578
Q ss_pred CccCcccccCCC--------------------C--CchhhHHHHHHHHHHHHhCCC-CCCCchHHHHHHHcC--c---cc
Q 005343 564 CYIDPEYQQTGM--------------------L--GVKSDLYSLGVVLLQLITARP-AMGLSHQVEQAIRNG--T---FS 615 (701)
Q Consensus 564 ~Y~aPE~~~~~~--------------------~--~~~sDvwSlGvil~elltG~~-pf~~~~~~~~~i~~~--~---~~ 615 (701)
.|+|||.+.... | ..+.||||+|||||+|++|.. ||.........+... . +.
T Consensus 375 ~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r 454 (507)
T PLN03224 375 RYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR 454 (507)
T ss_pred ceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH
Confidence 999999765432 1 124799999999999999984 775332221111110 0 00
Q ss_pred cc--cCccCCCCCHHHHHHHHHHHHHhhccCc---CCCCChhhhhhHHHHH
Q 005343 616 EL--LDPTVTGWPVEAALSIAKLALQCCELRK---RDRPDLVSVVLPELIR 661 (701)
Q Consensus 616 ~~--ld~~~~~~p~~~~~~l~~li~~cl~~~P---~~RPt~~~vl~~~~~~ 661 (701)
.. .......| ........+|+.+||..+| .+|+++.++|.|+|+.
T Consensus 455 ~~~~~~~~~~~~-d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 455 MYKGQKYDFSLL-DRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred hhcccCCCcccc-cccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 00 00011111 1234458899999999876 6899999999999983
No 387
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=304.36 Aligned_cols=253 Identities=29% Similarity=0.437 Sum_probs=204.4
Q ss_pred HHHhhcCceeeeeeeecCceeEEEEEEC---------CceEEEEEeCCCCCC-ChHHHHHHHHHHHhC-CCCcEEEEece
Q 005343 389 IEAATDYFSISRKIGEGGYGPVYKAQLD---------HTSVAIKVLGPDISQ-GPRQFKQEVEILGSM-RHTNMVILLGA 457 (701)
Q Consensus 389 i~~~~~~f~~~~~IG~G~fg~Vyk~~~~---------~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l-~HpnIv~l~g~ 457 (701)
++...++..+.+.||+|.||.|++|... ...||||.++..... ..+.+..|+++|+.+ +||||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3344455566779999999999999852 235999999877644 345699999999998 69999999999
Q ss_pred ecC--CCceEEeecCCCChhhHhcccC------CC-------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCC
Q 005343 458 CPE--YGCLVYEYMENGSLEDRLFQKD------NS-------PPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPA 522 (701)
Q Consensus 458 ~~~--~~~lV~Ey~~~gsL~~~l~~~~------~~-------~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~ 522 (701)
|.. ..++|+||+..|+|.++|.... .. ..++....+.++.|||.|+.||++.. +|||||-..
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhh
Confidence 965 4489999999999999997654 00 23888999999999999999999998 999999999
Q ss_pred CeeEcCCCcEEEEeeccccccCCCCCccccccccccccc--CCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 005343 523 NILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAG--TFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAM 599 (701)
Q Consensus 523 NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~g--t~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 599 (701)
|||+..+..+||+|||+|+...... .|......| ...|||||.+....|+.++|||||||+||||+| |..|+
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~-----~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PY 522 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKD-----YYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPY 522 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCC-----ceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCC
Confidence 9999999999999999999764332 122222233 345999999999999999999999999999999 66898
Q ss_pred CC---chHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 600 GL---SHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 600 ~~---~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
.+ ...+-..++.|.. ...|..+..++.+++..||+.+|.+||++.+++..
T Consensus 523 p~~~~~~~l~~~l~~G~r--------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 523 PGIPPTEELLEFLKEGNR--------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEF 575 (609)
T ss_pred CCCCcHHHHHHHHhcCCC--------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence 75 3344445666642 24466677789999999999999999999999843
No 388
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-31 Score=277.24 Aligned_cols=261 Identities=26% Similarity=0.377 Sum_probs=195.8
Q ss_pred HhhcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHh--CCCCcEEEEecee------cCCC
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGS--MRHTNMVILLGAC------PEYG 462 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~--l~HpnIv~l~g~~------~~~~ 462 (701)
....+..+.+.||+|.||+||+|.|.|..||||++.. .+...+.+|.+|... |+|+||+.++++- ....
T Consensus 208 TiarqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~s---rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQL 284 (513)
T KOG2052|consen 208 TIARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSS---RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQL 284 (513)
T ss_pred hhhheeEEEEEecCccccceeeccccCCceEEEEecc---cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEE
Confidence 3456788899999999999999999999999999864 345668899999876 4999999998874 2234
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-----cCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-----NKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-----~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
+||.+|.+.|||.|+|.+ ..++....++++..+|+||++||. .|...|-|||||+.|||+.+|+.+.|+|+
T Consensus 285 wLvTdYHe~GSL~DyL~r----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNR----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EEeeecccCCcHHHHHhh----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 799999999999999954 468889999999999999999993 34345999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCC----C--CchhhHHHHHHHHHHHHhC----------CCCCCC
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM----L--GVKSDLYSLGVVLLQLITA----------RPAMGL 601 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~--~~~sDvwSlGvil~elltG----------~~pf~~ 601 (701)
|||...+... ..-.......+||..|||||++.... + -..+||||||.|+||+... ++||..
T Consensus 361 GLAv~h~~~t--~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 361 GLAVRHDSDT--DTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eeeEEecccC--CcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 9997764432 11223346779999999999876543 1 2368999999999999852 366642
Q ss_pred ch----HHHHHHHcCccccccCccCC-CCC-HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 602 SH----QVEQAIRNGTFSELLDPTVT-GWP-VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 602 ~~----~~~~~i~~~~~~~~ld~~~~-~~p-~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
-. ..+++.. ---.+.+-|..+ -|. ......+.+++..||..+|.-|-++--| ...+.++
T Consensus 439 ~Vp~DPs~eeMrk-VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri-KKtl~~l 503 (513)
T KOG2052|consen 439 VVPSDPSFEEMRK-VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI-KKTLAKL 503 (513)
T ss_pred CCCCCCCHHHHhc-ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH-HHHHHHH
Confidence 21 1222211 111112223322 233 3445569999999999999999997654 3444444
No 389
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2e-31 Score=305.23 Aligned_cols=261 Identities=22% Similarity=0.244 Sum_probs=171.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEece--------
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGA-------- 457 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~-------- 457 (701)
..++|.+.+.||+|+||.||+|.+. +..||+|.+..... .+.+..+ .+....+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 3578999999999999999999984 45699998764321 1111111 1112222222222211
Q ss_pred ecCCCceEEeecCCCChhhHhcccCCC-----------------CCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC
Q 005343 458 CPEYGCLVYEYMENGSLEDRLFQKDNS-----------------PPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLK 520 (701)
Q Consensus 458 ~~~~~~lV~Ey~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLK 520 (701)
.....++||||+.+++|.+++...... .......+..|+.||+.||.|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 133458999999999999988543210 11123345679999999999999999 9999999
Q ss_pred CCCeeEcC-CCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCC----------------------CCC
Q 005343 521 PANILLDQ-NYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTG----------------------MLG 577 (701)
Q Consensus 521 p~NILl~~-~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------------------~~~ 577 (701)
|+|||++. ++.+||+|||+|+.+.... .+.....+||+.|+|||.+... .++
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~-----~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGI-----NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCcccccccc-----ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 99999985 6899999999998653321 1223456889999999954322 234
Q ss_pred chhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHHcCcc-----ccccCccCC-C----C--CHHHHHHHHHHHHHhhccC
Q 005343 578 VKSDLYSLGVVLLQLITARPAMGLSH-QVEQAIRNGTF-----SELLDPTVT-G----W--PVEAALSIAKLALQCCELR 644 (701)
Q Consensus 578 ~~sDvwSlGvil~elltG~~pf~~~~-~~~~~i~~~~~-----~~~ld~~~~-~----~--p~~~~~~l~~li~~cl~~~ 644 (701)
.++|||||||+||||+++..|++... .....+..... .....+... . + .........+|+.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 56799999999999999776654321 11111221111 001111100 0 0 0001123458999999999
Q ss_pred cCCCCChhhhhhHHHHHHHh
Q 005343 645 KRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 645 P~~RPt~~~vl~~~~~~l~~ 664 (701)
|++||++.+++.|+|+.-.+
T Consensus 438 P~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 438 GRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cccCCCHHHHhCCcCcCCCC
Confidence 99999999999999996433
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=6.5e-32 Score=300.82 Aligned_cols=249 Identities=24% Similarity=0.301 Sum_probs=198.6
Q ss_pred ceeeeeeeecCce-eEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEeceecCC--CceEEeecCC
Q 005343 396 FSISRKIGEGGYG-PVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGACPEY--GCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg-~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~~lV~Ey~~~ 471 (701)
|...+.+|.|+-| .||+|.+.++.||||.+-.. .....++||..|..- +|||||.+|+.-.+. .|+..|.| .
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-A 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-h
Confidence 5556679999876 68999999999999987543 234578999999888 699999999876443 37999999 5
Q ss_pred CChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-----CCcEEEEeeccccccCC
Q 005343 472 GSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-----NYVSKISDVGLARLVPP 545 (701)
Q Consensus 472 gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-----~~~~KL~DFGla~~~~~ 545 (701)
.+|.+++... .......-.....+..|++.||++||+.+ ||||||||.||||+. ...++|+|||+|+.++.
T Consensus 587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 7999999663 11111111234568899999999999999 999999999999965 25789999999999876
Q ss_pred CCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 546 SAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITA-RPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 546 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG-~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
+.. ...+..+..||.+|+|||++....-+..+|||||||++|+.++| ..|||....-+..|-.|.+.-..-....+
T Consensus 664 ~~s---S~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~L~~~~d 740 (903)
T KOG1027|consen 664 GKS---SFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVHLEPLPD 740 (903)
T ss_pred Ccc---hhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceeeeccCch
Confidence 542 22236788999999999999999888899999999999999997 79999888777777777654432222222
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELI 660 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~ 660 (701)
| ...+||.+|+..+|..||++.+||.|+||
T Consensus 741 ~------eA~dLI~~ml~~dP~~RPsa~~VL~HPlF 770 (903)
T KOG1027|consen 741 C------EAKDLISRMLNPDPQLRPSATDVLNHPLF 770 (903)
T ss_pred H------HHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence 2 57899999999999999999999999765
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=270.74 Aligned_cols=261 Identities=22% Similarity=0.311 Sum_probs=199.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCCCCC---hHHHHHHHHHHHhC-CCCcEEEEeceecC--CCc
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDISQG---PRQFKQEVEILGSM-RHTNMVILLGACPE--YGC 463 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~ 463 (701)
...+|.+++.||+|+|..|..+++..+. +|+|++++....+ ..=.+.|-.+..+. +||.+|-|...|.. ..+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 3567999999999999999999996554 9999988764332 33356677777665 79999999877744 348
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+|.||++||+|.-.+ +....++++....+..+|+.||.|||+.| ||.||||.+|+|+|..|++||+|+|+++--
T Consensus 328 fvieyv~ggdlmfhm---qrqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHM---QRQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEEecCcceeeeh---hhhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999996555 44456899999999999999999999999 999999999999999999999999999743
Q ss_pred CCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HHHHHHHcCccccccCcc
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~~~~i~~~~~~~~ld~~ 621 (701)
-. .....++.|||+.|+|||++.+..|+..+|||+|||+++||+.|+.||+.-. ..+...+.-.|+-++...
T Consensus 402 l~------~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq 475 (593)
T KOG0695|consen 402 LG------PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ 475 (593)
T ss_pred CC------CCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc
Confidence 11 1223478899999999999999999999999999999999999999996211 000000000011111111
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCC------hhhhhhHHHHHHHhc
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPD------LVSVVLPELIRLRDL 665 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt------~~~vl~~~~~~l~~~ 665 (701)
...|...+.....++...|..||++|.. +.++-.|.|++.-++
T Consensus 476 -iriprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idw 524 (593)
T KOG0695|consen 476 -IRIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDW 524 (593)
T ss_pred -ccccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCH
Confidence 1223334445678888999999999853 788889999987665
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=4.1e-31 Score=255.16 Aligned_cols=254 Identities=22% Similarity=0.364 Sum_probs=198.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCC-CCcEEEEeceecCC----Cce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMR-HTNMVILLGACPEY----GCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~~----~~l 464 (701)
..++|++.+++|+|.|++||.|.. ++..++||++++- ..+.+.+|+.||..|. ||||++|++...+. ..|
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 567899999999999999999985 6677999999764 3567899999999997 99999999998543 379
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeecccccc
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLV 543 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~ 543 (701)
|+||+++.+...+. +.|+.-.+..++.+++.||.|+|+.| |+|||+||.|+++|. ...++|+|+|||.++
T Consensus 113 iFE~v~n~Dfk~ly------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLY------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred HhhhhccccHHHHh------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence 99999998876644 45777788889999999999999999 999999999999985 567899999999998
Q ss_pred CCCCCcccccccccccccCCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCC-CCchHHHHHHHc----------
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAM-GLSHQVEQAIRN---------- 611 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf-~~~~~~~~~i~~---------- 611 (701)
.+...- .-.+.+..|--||++-. ..|+..-|+|||||+|..|+..+.|| .+.+..++.++-
T Consensus 184 Hp~~eY-------nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~ 256 (338)
T KOG0668|consen 184 HPGKEY-------NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELY 256 (338)
T ss_pred CCCcee-------eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHH
Confidence 765422 33466778899997654 56899999999999999999999776 322222222210
Q ss_pred ---CccccccCccCCC---------CCH--------HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 612 ---GTFSELLDPTVTG---------WPV--------EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 612 ---~~~~~~ld~~~~~---------~p~--------~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
+++.--+||...+ |.. -..++..+|+.+.|..|-++|||+.+.+.|++|.-..
T Consensus 257 ~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 257 AYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred HHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 0111123333221 211 1235678999999999999999999999999998643
No 393
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.97 E-value=1.3e-31 Score=283.61 Aligned_cols=267 Identities=22% Similarity=0.282 Sum_probs=208.1
Q ss_pred cccccCHHHHHHhhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCC------CCcE
Q 005343 380 RYRKYTIEEIEAATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMR------HTNM 451 (701)
Q Consensus 380 ~~~~~~~~ei~~~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~------HpnI 451 (701)
.|..|.+-| ...++|.+....|+|-||+|..|.+ .+..||||++..+. ...+.-+.|++||++|+ --|+
T Consensus 420 GYYrv~igE--~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 420 GYYRVRIGE--LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred ceEEEehhh--hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHH
Confidence 344555544 4677899999999999999999998 45679999997653 22344578999999995 2367
Q ss_pred EEEecee--cCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC
Q 005343 452 VILLGAC--PEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN 529 (701)
Q Consensus 452 v~l~g~~--~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~ 529 (701)
+.|+..| ..+.|||+|-+ ..+|.++|.+.+..-.|....+..++.|++.||..|-..+ |+|.||||+|||++.+
T Consensus 497 lrl~r~F~hknHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~ 572 (752)
T KOG0670|consen 497 LRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNES 572 (752)
T ss_pred HHHHHHhhhcceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccC
Confidence 7777766 45679999998 6799999999888888999999999999999999999999 9999999999999865
Q ss_pred -CcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch--HH-
Q 005343 530 -YVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH--QV- 605 (701)
Q Consensus 530 -~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~--~~- 605 (701)
..+||||||.|..+.... + +-...+..|.|||++.+-.|+...|+||.||+||||.||+..|.+.. ++
T Consensus 573 k~iLKLCDfGSA~~~~ene---i-----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~ML 644 (752)
T KOG0670|consen 573 KNILKLCDFGSASFASENE---I-----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQML 644 (752)
T ss_pred cceeeeccCcccccccccc---c-----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHH
Confidence 577999999998764332 2 23345678999999999999999999999999999999998886532 11
Q ss_pred -----------HHHHHcCcccc---------------------------ccCc------------cCCCCCHHHHHHHHH
Q 005343 606 -----------EQAIRNGTFSE---------------------------LLDP------------TVTGWPVEAALSIAK 635 (701)
Q Consensus 606 -----------~~~i~~~~~~~---------------------------~ld~------------~~~~~p~~~~~~l~~ 635 (701)
..+++.|-|.+ .+.| .+++-.......|.+
T Consensus 645 rl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rd 724 (752)
T KOG0670|consen 645 RLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRD 724 (752)
T ss_pred HHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHH
Confidence 12233332211 1111 011111233446899
Q ss_pred HHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 636 LALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 636 li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
|+..||.+||..|.+..+.|.|+|+.
T Consensus 725 LLdkml~LdP~KRit~nqAL~HpFi~ 750 (752)
T KOG0670|consen 725 LLDKMLILDPEKRITVNQALKHPFIT 750 (752)
T ss_pred HHHHHhccChhhcCCHHHHhcCCccc
Confidence 99999999999999999999999875
No 394
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-29 Score=256.07 Aligned_cols=253 Identities=23% Similarity=0.260 Sum_probs=196.8
Q ss_pred hcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCC--CCChHHHHHHHHHHHhCCCCcEEEEeceecC--------
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDI--SQGPRQFKQEVEILGSMRHTNMVILLGACPE-------- 460 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 460 (701)
..+|.-+..+|.|.- .|..+-+ .+.+||+|.+.... ....+...+|..++..+.|+||+.++.+|..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777888999988 5655554 67889999775542 2344668999999999999999999999822
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
..|+||||| .++|...+. ..+.-.+...|+.|+++|+.|||+.+ |+||||||+||++..++.+||.|||+|
T Consensus 95 e~y~v~e~m-~~nl~~vi~-----~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL-----MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH-----HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 338999999 568888775 23566788899999999999999999 999999999999999999999999999
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHc---------
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRN--------- 611 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~--------- 611 (701)
+.-... ..++..+.|..|.|||++.+..|...+||||+|||+.||++|+-.|.+.+..++....
T Consensus 166 r~e~~~-------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 166 RTEDTD-------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cccCcc-------cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCH
Confidence 864332 3467789999999999998888999999999999999999999888765433322210
Q ss_pred --------------------------CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 612 --------------------------GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 612 --------------------------~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..|.+.+-+.....+.-....+.+++.+||-.+|++|-+++++|.|+.+++
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~v 315 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKV 315 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeee
Confidence 011111111111112122334789999999999999999999999998873
No 395
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=5.4e-30 Score=278.78 Aligned_cols=257 Identities=23% Similarity=0.339 Sum_probs=211.9
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEecee--cCCCceEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGAC--PEYGCLVYE 467 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~E 467 (701)
..++|.++..+|.|.||.|||+++. +...|+|+++.....+..-+++|+-+++..+|||||.++|.+ .+..++.||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 4578999999999999999999984 455999999999888888899999999999999999999998 456699999
Q ss_pred ecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCC
Q 005343 468 YMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSA 547 (701)
Q Consensus 468 y~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~ 547 (701)
||.+|+|.+.- ....++++.++...+.+.+.||.|||+.+ -+|||||=.|||++..|.+|++|||.+..+..
T Consensus 93 ycgggslQdiy---~~TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita-- 164 (829)
T KOG0576|consen 93 YCGGGSLQDIY---HVTGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA-- 164 (829)
T ss_pred ecCCCccccee---eecccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh--
Confidence 99999999865 34567999999999999999999999999 99999999999999999999999999876632
Q ss_pred CcccccccccccccCCCccCccc---ccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCC
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEY---QQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTG 624 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~---~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~ 624 (701)
+--+...+.||++|||||+ -..+.|+..+|||++|+...|+---.||.-..+..+...-.. -.....|.+.
T Consensus 165 ----ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmT-kS~~qpp~lk- 238 (829)
T KOG0576|consen 165 ----TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMT-KSGFQPPTLK- 238 (829)
T ss_pred ----hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhh-ccCCCCCccc-
Confidence 2334578899999999995 456789999999999999999988888876555544433211 1112222222
Q ss_pred CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 625 WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 625 ~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.+......|.+|+..|+..+|+.||+...+|.|+|...
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 12233445899999999999999999999998877543
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=2.8e-29 Score=239.42 Aligned_cols=201 Identities=28% Similarity=0.370 Sum_probs=160.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC-CChHHHHHHHHHHHhC-CCCcEEEEeceecCC--CceE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS-QGPRQFKQEVEILGSM-RHTNMVILLGACPEY--GCLV 465 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~--~~lV 465 (701)
..+....+..||+|+||.|=+.++ .++-.|+|.+..... +...++.+|+++..+. ..|.+|.+||...+. .++.
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIc 123 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWIC 123 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEe
Confidence 344555667899999999988877 667799998876653 2344578888886554 799999999987543 3899
Q ss_pred EeecCCCChhhHhcc-cCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 466 YEYMENGSLEDRLFQ-KDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
||.| ..||..+-.+ ......+++..+-+|+..+..||.|||+.- .+||||+||+|||++..|++||||||.+.++.
T Consensus 124 ME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 124 MELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 9999 4677654422 145567899999999999999999999864 29999999999999999999999999998876
Q ss_pred CCCCcccccccccccccCCCccCcccccC----CCCCchhhHHHHHHHHHHHHhCCCCCCCc
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQT----GMLGVKSDLYSLGVVLLQLITARPAMGLS 602 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~----~~~~~~sDvwSlGvil~elltG~~pf~~~ 602 (701)
.+.+. +...|-..|||||.+.. ..|+.++||||||+.+.||.+++.|+...
T Consensus 201 dSiAk-------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 201 DSIAK-------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred hhhHH-------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 55432 33578888999997543 36999999999999999999999998643
No 397
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.2e-30 Score=254.39 Aligned_cols=254 Identities=23% Similarity=0.340 Sum_probs=190.9
Q ss_pred ceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCC--CChHHHHHHHHHHHhCCCCcEEEEeceec-------CCCce
Q 005343 396 FSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDIS--QGPRQFKQEVEILGSMRHTNMVILLGACP-------EYGCL 464 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~-------~~~~l 464 (701)
....+.||-|+||.||-+++ +++.|++|.+..-.. ...+.+.+|+.+|.-++|.|++..+++.. +..|.
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 34457899999999999998 677899997743221 22456889999999999999999888752 23378
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
+.|+| ..+|...+. ...+++...+.-+..||+.||.|||+.+ |+||||||.|+|++.|..+||||||+++.-.
T Consensus 135 ~TELm-QSDLHKIIV---SPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 135 LTELM-QSDLHKIIV---SPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHHH-Hhhhhheec---cCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccc
Confidence 88988 457777663 3446888888889999999999999999 9999999999999999999999999999764
Q ss_pred CCCCcccccccccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHH--HH-----------
Q 005343 545 PSAADTITQYHMTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQA--IR----------- 610 (701)
Q Consensus 545 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~--i~----------- 610 (701)
... ...++..+.|.+|+|||++++. .|+..+||||.|||+.|||..+..|...+.+++. |-
T Consensus 208 ~d~-----~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaM 282 (449)
T KOG0664|consen 208 QRD-----RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAM 282 (449)
T ss_pred hhh-----hhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHH
Confidence 433 2345677889999999988775 5999999999999999999999888654432221 10
Q ss_pred ----cCcccccc-----Ccc---CCC--CCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHH
Q 005343 611 ----NGTFSELL-----DPT---VTG--WPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIR 661 (701)
Q Consensus 611 ----~~~~~~~l-----d~~---~~~--~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~ 661 (701)
+|.-..++ .|+ +.. -+....-+...+..+++..+|+.|.+..+.+.|....
T Consensus 283 r~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 283 KYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLE 347 (449)
T ss_pred HHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccc
Confidence 11111111 011 111 1122233467788899999999999999998876543
No 398
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.4e-27 Score=233.72 Aligned_cols=207 Identities=35% Similarity=0.538 Sum_probs=179.4
Q ss_pred eeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceecC--CCceEEeecCCCChhh
Q 005343 402 IGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACPE--YGCLVYEYMENGSLED 476 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 476 (701)
||+|++|.||++... +..+++|++...... ....+.+|+.+++.+.|++++++++++.. ..+++|||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999996 778999998766432 24679999999999999999999999865 5689999999999999
Q ss_pred HhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeeccccccCCCCCccccccc
Q 005343 477 RLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLVPPSAADTITQYH 555 (701)
Q Consensus 477 ~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~~~~~~~~~~~~~ 555 (701)
++.... ..+++..+..++.+++.+|.+||+.+ ++|+||+|.||+++. ++.++|+|||++........ .
T Consensus 81 ~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~------~ 149 (215)
T cd00180 81 LLKENE--GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS------L 149 (215)
T ss_pred HHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc------h
Confidence 885432 45889999999999999999999999 999999999999999 89999999999987643211 1
Q ss_pred ccccccCCCccCcccccCC-CCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHH
Q 005343 556 MTTAAGTFCYIDPEYQQTG-MLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIA 634 (701)
Q Consensus 556 ~~~~~gt~~Y~aPE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~ 634 (701)
.....+...|++||.+... .++.+.|+|++|+++++| ..+.
T Consensus 150 ~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------~~~~ 191 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------PELK 191 (215)
T ss_pred hhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH--------------------------------------HHHH
Confidence 2345678899999998887 889999999999999999 3589
Q ss_pred HHHHHhhccCcCCCCChhhhhhH
Q 005343 635 KLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 635 ~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
+++..|+..+|.+||++.+++.+
T Consensus 192 ~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 192 DLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHhhCCcccCcCHHHHhhC
Confidence 99999999999999999998854
No 399
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.95 E-value=1.6e-28 Score=252.88 Aligned_cols=250 Identities=21% Similarity=0.316 Sum_probs=202.2
Q ss_pred HhhcCceeeeeeeecCceeEEEEEECC-------ceEEEEEeCCCCCCC-hHHHHHHHHHHHhCCCCcEEEEeceecC--
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLDH-------TSVAIKVLGPDISQG-PRQFKQEVEILGSMRHTNMVILLGACPE-- 460 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~~-------~~vAiK~l~~~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 460 (701)
...++++...++-+|.||.||.|.|.. +.|.+|.++....+- ...+.+|--.+..+.|||+..+.|++-+
T Consensus 281 v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 281 VQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred hhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 344557777789999999999997632 237788777665432 3457889999999999999999999833
Q ss_pred -CCceEEeecCCCChhhHhc-----ccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEE
Q 005343 461 -YGCLVYEYMENGSLEDRLF-----QKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKI 534 (701)
Q Consensus 461 -~~~lV~Ey~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL 534 (701)
..+.+|.++.-|+|..+|. .-.....++-.+...++.|++.|+.|||+++ +||.||-..|+++|+...+||
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd~LqVkl 437 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDDQLQVKL 437 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehhheeEEe
Confidence 4478999999999999997 2334456777788899999999999999999 999999999999999999999
Q ss_pred EeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh-CCCCCCCch--HHHHHHHc
Q 005343 535 SDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT-ARPAMGLSH--QVEQAIRN 611 (701)
Q Consensus 535 ~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~--~~~~~i~~ 611 (701)
+|-.|+|.+.|..... .....-....||+||.+.+..|+..+|||||||+||||+| |+.|+..-+ +++..+.+
T Consensus 438 tDsaLSRDLFP~DYhc----LGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkd 513 (563)
T KOG1024|consen 438 TDSALSRDLFPGDYHC----LGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKD 513 (563)
T ss_pred ccchhccccCcccccc----cCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhc
Confidence 9999999887654211 1122345678999999999999999999999999999998 888886443 45555665
Q ss_pred CccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 612 GTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 612 ~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
|. ....|.+|+.+|..++..||...|++||++.+++
T Consensus 514 Gy--------RlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv 549 (563)
T KOG1024|consen 514 GY--------RLAQPFNCPDELFTVMACCWALLPEERPSFSQLV 549 (563)
T ss_pred cc--------eecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHH
Confidence 53 2245778888999999999999999999999986
No 400
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.9e-26 Score=231.65 Aligned_cols=196 Identities=36% Similarity=0.519 Sum_probs=167.8
Q ss_pred ceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC-ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecC
Q 005343 396 FSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ-GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYME 470 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~ 470 (701)
|.+.+.||.|+||.||++... +..+++|.+...... ....+.+|++.+..++|+|++++++++. +..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 567889999999999999995 477999999876544 5677999999999999999999999885 45689999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
+++|.+++..... .+++.....++.+++.+|.|||+.+ ++|+||+|.||+++.++.++|+|||++..+......
T Consensus 81 ~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~- 154 (225)
T smart00221 81 GGDLFDYLRKKGG--KLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA- 154 (225)
T ss_pred CCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-
Confidence 9999998854322 1788999999999999999999998 999999999999999999999999999876433200
Q ss_pred cccccccccccCCCccCcccc-cCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQ-QTGMLGVKSDLYSLGVVLLQLITARPAMGL 601 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDvwSlGvil~elltG~~pf~~ 601 (701)
......++..|++||.+ ....++.++|+|+||+++++|++|++||..
T Consensus 155 ----~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 12345678899999988 667788899999999999999999999966
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=6.1e-28 Score=258.97 Aligned_cols=193 Identities=25% Similarity=0.351 Sum_probs=164.1
Q ss_pred cCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCC--------CChHHHHHHHHHHHhCC---CCcEEEEeceecC
Q 005343 394 DYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDIS--------QGPRQFKQEVEILGSMR---HTNMVILLGACPE 460 (701)
Q Consensus 394 ~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~--------~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~ 460 (701)
..|..+..+|+|+||.|+.|.++ +..|+||.+.+... .....+-.||.||..++ |+||++++++|.+
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46999999999999999999994 44599998766531 11223677999999998 9999999999966
Q ss_pred C--CceEEeec-CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEee
Q 005343 461 Y--GCLVYEYM-ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDV 537 (701)
Q Consensus 461 ~--~~lV~Ey~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DF 537 (701)
+ .||+||-. +|-+|.+++ ...+.+++....-|+.||+.|+++||+.+ |||||||-+|+.++.+|.+||+||
T Consensus 641 dd~yyl~te~hg~gIDLFd~I---E~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klidf 714 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFI---EFKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLIDF 714 (772)
T ss_pred CCeeEEEecCCCCCcchhhhh---hccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEeec
Confidence 4 46888865 456888888 44466888999999999999999999999 999999999999999999999999
Q ss_pred ccccccCCCCCcccccccccccccCCCccCcccccCCCC-CchhhHHHHHHHHHHHHhCCCCCC
Q 005343 538 GLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGML-GVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 538 Gla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~ 600 (701)
|.|.+...+ .+..++||..|.|||++.+.+| +..-|||++|++||.++....||.
T Consensus 715 gsaa~~ksg--------pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 715 GSAAYTKSG--------PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred cchhhhcCC--------CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 999876433 2456789999999999999887 788999999999999999998874
No 402
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=1.7e-27 Score=249.15 Aligned_cols=263 Identities=24% Similarity=0.298 Sum_probs=196.7
Q ss_pred HhhcCceeeeeeeecCceeEEEEEECC-----ceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEecee--cCCC
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLDH-----TSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGAC--PEYG 462 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~~-----~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~--~~~~ 462 (701)
...+.|..+++||+|.|+.||++.+.. ..||+|.+... ..+..+..|+++|..+ -+-||+++.+.+ .+..
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~t--s~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v 110 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRT--SSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQV 110 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccc--cCchHHHHHHHHHHHhccchhhhcchhhhccCCee
Confidence 345678999999999999999998743 35999987654 5567799999999999 588999999987 4566
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-CCcEEEEeecccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-NYVSKISDVGLAR 541 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~ 541 (701)
++|+||++.....+++. .++...+..++..++.||.++|.+| ||||||||+|+|.+. .+.-.|.|||||.
T Consensus 111 ~ivlp~~~H~~f~~l~~------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 111 AIVLPYFEHDRFRDLYR------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred EEEecccCccCHHHHHh------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechhHH
Confidence 99999999999988773 3567788899999999999999999 999999999999974 5677899999997
Q ss_pred ccCCCC------C-------c-------------------------ccccccccccccCCCccCcccc-cCCCCCchhhH
Q 005343 542 LVPPSA------A-------D-------------------------TITQYHMTTAAGTFCYIDPEYQ-QTGMLGVKSDL 582 (701)
Q Consensus 542 ~~~~~~------~-------~-------------------------~~~~~~~~~~~gt~~Y~aPE~~-~~~~~~~~sDv 582 (701)
..+... . . ..........+||++|+|||++ ..+..++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 321110 0 0 0000112357899999999964 56678999999
Q ss_pred HHHHHHHHHHHhCCCCCCC-chH---------------HHH-HHHcCc--ccc----------------c----cCc---
Q 005343 583 YSLGVVLLQLITARPAMGL-SHQ---------------VEQ-AIRNGT--FSE----------------L----LDP--- 620 (701)
Q Consensus 583 wSlGvil~elltG~~pf~~-~~~---------------~~~-~i~~~~--~~~----------------~----ld~--- 620 (701)
||.|||++-+++++.||-. .++ ++. +.-.|. +.+ + +.+
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999988731 111 111 111122 111 0 000
Q ss_pred ---cCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHh
Q 005343 621 ---TVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 621 ---~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~ 664 (701)
....|....+..+.+|+.+|++.+|.+|.++.+.|.|+|+.=.+
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~ 388 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEAD 388 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchh
Confidence 11122223344689999999999999999999999999987433
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.94 E-value=4.4e-27 Score=281.46 Aligned_cols=204 Identities=19% Similarity=0.214 Sum_probs=145.0
Q ss_pred hCCC-CcEEEEecee-------c--CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCe
Q 005343 445 SMRH-TNMVILLGAC-------P--EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPL 514 (701)
Q Consensus 445 ~l~H-pnIv~l~g~~-------~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~i 514 (701)
.++| +||+.++++| . +..++++||+ +++|.++|... ..++++..+..|+.||+.||.|||+++ |
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~~g---I 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP--DRSVDAFECFHVFRQIVEIVNAAHSQG---I 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc--cccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 4556 5788888876 1 1235678887 67999998532 346899999999999999999999999 9
Q ss_pred eecCCCCCCeeEcCCCc-------------------EEEEeeccccccCCCCCc---c-------cccccccccccCCCc
Q 005343 515 VHRDLKPANILLDQNYV-------------------SKISDVGLARLVPPSAAD---T-------ITQYHMTTAAGTFCY 565 (701)
Q Consensus 515 iHrDLKp~NILl~~~~~-------------------~KL~DFGla~~~~~~~~~---~-------~~~~~~~~~~gt~~Y 565 (701)
|||||||+||||+..+. +||+|||+++........ . .........+||++|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999965444 455555555432110000 0 000111235689999
Q ss_pred cCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCc
Q 005343 566 IDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRK 645 (701)
Q Consensus 566 ~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P 645 (701)
+|||++.+..|+.++|||||||+||||++|.+|+.........+.... +.+.. .........++.+||..+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~~~~~~~~~~L~~~P 253 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHRV----LPPQI----LLNWPKEASFCLWLLHPEP 253 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHHHhh----cChhh----hhcCHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999764332222222211 11111 1112335688899999999
Q ss_pred CCCCChhhhhhHHHHHH
Q 005343 646 RDRPDLVSVVLPELIRL 662 (701)
Q Consensus 646 ~~RPt~~~vl~~~~~~l 662 (701)
.+||++.+++.|+|+.-
T Consensus 254 ~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 254 SCRPSMSELLQSEFINE 270 (793)
T ss_pred hhCcChHHHhhchhhhh
Confidence 99999999999999853
No 404
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2e-26 Score=227.88 Aligned_cols=240 Identities=21% Similarity=0.300 Sum_probs=174.1
Q ss_pred hhcCceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEEEece-e--cCCCceE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVILLGA-C--PEYGCLV 465 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~-~--~~~~~lV 465 (701)
..+.|.+.+.||+|-||.+-++++++ +.+++|.+.... .....|.+|..---.| .|.||+.-|.. | .+..+++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 34679999999999999999999954 569999887654 4567899998765445 58999987765 3 3445789
Q ss_pred EeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc--CCCcEEEEeecccccc
Q 005343 466 YEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD--QNYVSKISDVGLARLV 543 (701)
Q Consensus 466 ~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~--~~~~~KL~DFGla~~~ 543 (701)
+||++.|+|...+.. ..+.+....+++.|+++||.|+|+.+ +||||||.+|||+- +...+||||||+.+..
T Consensus 101 qE~aP~gdL~snv~~----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred eccCccchhhhhcCc----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeeccccccc
Confidence 999999999987733 45778888999999999999999999 99999999999993 4468999999998764
Q ss_pred CCCCCcccccccccccccCCCccCcccccC---CC--CCchhhHHHHHHHHHHHHhCCCCCCCchHH------HHHHHcC
Q 005343 544 PPSAADTITQYHMTTAAGTFCYIDPEYQQT---GM--LGVKSDLYSLGVVLLQLITARPAMGLSHQV------EQAIRNG 612 (701)
Q Consensus 544 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~--~~~~sDvwSlGvil~elltG~~pf~~~~~~------~~~i~~~ 612 (701)
.... ...--+..|.+||.... +. ..+.+|+|.||+|+|.+|||.+|++..... -..+..+
T Consensus 174 g~tV---------~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~r 244 (378)
T KOG1345|consen 174 GTTV---------KYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKR 244 (378)
T ss_pred Ccee---------hhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcc
Confidence 3211 11123456899996443 22 578899999999999999999999733211 1122222
Q ss_pred ccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhh
Q 005343 613 TFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVS 653 (701)
Q Consensus 613 ~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~ 653 (701)
. .+.++..-......+..+..+-|..+|++|-.+.+
T Consensus 245 k-----~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~ 280 (378)
T KOG1345|consen 245 K-----NPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWT 280 (378)
T ss_pred c-----CccCchhhcccCHHHHHHHHHhcCCcccccchhHH
Confidence 2 22222111111234667777888888988844433
No 405
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.92 E-value=4.5e-25 Score=214.96 Aligned_cols=166 Identities=21% Similarity=0.227 Sum_probs=129.1
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|+|.+++... ..++++..+..|+.||+.||.|||+.+ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~~--~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~----- 62 (176)
T smart00750 1 VSLADILEVR--GRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE----- 62 (176)
T ss_pred CcHHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc-----
Confidence 7899988543 346999999999999999999999876 999999999999999 9999875331
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHH---cCccccccCccCCCCCHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIR---NGTFSELLDPTVTGWPVE 628 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~---~~~~~~~ld~~~~~~p~~ 628 (701)
...||+.|+|||++.+..++.++|||||||++|||+||++||.........+. .+... .++.....+..
T Consensus 63 ------~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 134 (176)
T smart00750 63 ------QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPA--DDPRDRSNLES 134 (176)
T ss_pred ------cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhcc--CCccccccHHH
Confidence 12689999999999999999999999999999999999999975543222111 11110 11111111222
Q ss_pred HHH--HHHHHHHHhhccCcCCCCChhhhhhHHHHHHH
Q 005343 629 AAL--SIAKLALQCCELRKRDRPDLVSVVLPELIRLR 663 (701)
Q Consensus 629 ~~~--~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~ 663 (701)
... .+.+++.+||..+|.+||++.+++.|.+....
T Consensus 135 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 135 VSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred HHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 222 59999999999999999999999999988753
No 406
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.92 E-value=1.1e-24 Score=206.23 Aligned_cols=135 Identities=41% Similarity=0.682 Sum_probs=116.8
Q ss_pred EEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCC-----------ChHHHHHHHHHHHHHHhhcCCe
Q 005343 23 ITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPA-----------TNDELQKLFLPYRGLFARKRIL 91 (701)
Q Consensus 23 ~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~-----------~~~~~~~~l~~~~~~~~~~~v~ 91 (701)
+||||+|+|+.|.+||+||++++...|++|++|||.+++........ ..+..+++++.+...|...++.
T Consensus 1 ~ILVavD~S~~s~~al~~a~~~a~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 80 (146)
T cd01989 1 SVAVAVDKDKKSKNALKWALDNLATKGQTIVLVHVHPPITSIPSSSGKLEVASAYKQEEDKEAKELLLPYRCFCSRKGVQ 80 (146)
T ss_pred CEEEEecCccccHHHHHHHHHhccCCCCcEEEEEeccCcccCCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCe
Confidence 59999999999999999999999999999999999986422111100 0156677888898899889999
Q ss_pred eeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEecCC
Q 005343 92 AREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIISSKG 158 (701)
Q Consensus 92 ~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~~kg 158 (701)
++..++.+++|+++|+++|+++++|+||||+||++++.|.|+.|||+.+|++++|++|||+||+ +|
T Consensus 81 ~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~~l~~~~~gssva~~Vi~~a~~~c~Vlvv~-~~ 146 (146)
T cd01989 81 CEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDNHFSMKFKKSDVASSVLKEAPDFCTVYVVS-KG 146 (146)
T ss_pred EEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCCceeecccCCchhHHHHhcCCCCceEEEEe-Cc
Confidence 9999999779999999999999999999999999999997762379999999999999999999 87
No 407
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=1.7e-22 Score=211.14 Aligned_cols=266 Identities=33% Similarity=0.468 Sum_probs=203.2
Q ss_pred ceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCC---hHHHHHHHHHHHhCCCC-cEEEEeceecCCC--ceEEeec
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG---PRQFKQEVEILGSMRHT-NMVILLGACPEYG--CLVYEYM 469 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~---~~~~~~Ei~il~~l~Hp-nIv~l~g~~~~~~--~lV~Ey~ 469 (701)
|.+...||.|+||.||++.+. ..+++|.+....... ...+.+|+.++..+.|+ +++.+++.+.... +++++|+
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 80 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYV 80 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecC
Confidence 678899999999999999988 779999988776543 56799999999999988 7999999885443 7999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC-cEEEEeeccccccCCCCC
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARLVPPSAA 548 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~~~~~~~ 548 (701)
.++++.+++........+.......++.|++.++.|+|..+ ++|||+||+||+++..+ .++++|||+++.+.....
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~ 157 (384)
T COG0515 81 DGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS 157 (384)
T ss_pred CCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence 99999966633221126888899999999999999999999 99999999999999988 799999999986543321
Q ss_pred cccccccccccccCCCccCcccccC---CCCCchhhHHHHHHHHHHHHhCCCCCCCch------HHHHHHHcCccccccC
Q 005343 549 DTITQYHMTTAAGTFCYIDPEYQQT---GMLGVKSDLYSLGVVLLQLITARPAMGLSH------QVEQAIRNGTFSELLD 619 (701)
Q Consensus 549 ~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~~~~sDvwSlGvil~elltG~~pf~~~~------~~~~~i~~~~~~~~ld 619 (701)
............||..|++||.+.. ..++...|+||+|++++++++|..||.... .....+..........
T Consensus 158 ~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (384)
T COG0515 158 TSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLAS 237 (384)
T ss_pred cccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccccc
Confidence 1100013467789999999998887 578999999999999999999999987654 2222222222110000
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhc
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDL 665 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~ 665 (701)
+.....+......+.+++..|+..+|..|.+......+.+......
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 283 (384)
T COG0515 238 PLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKL 283 (384)
T ss_pred ccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCccc
Confidence 1111111112245889999999999999999999998866665443
No 408
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=7.5e-24 Score=228.34 Aligned_cols=170 Identities=18% Similarity=0.143 Sum_probs=130.6
Q ss_pred HhhcCceeeeeeeecCceeEEEEEEC---CceEEEEEeCCCCC-----CChHHHHHHHHHHHhCCCCcEEE-EeceecCC
Q 005343 391 AATDYFSISRKIGEGGYGPVYKAQLD---HTSVAIKVLGPDIS-----QGPRQFKQEVEILGSMRHTNMVI-LLGACPEY 461 (701)
Q Consensus 391 ~~~~~f~~~~~IG~G~fg~Vyk~~~~---~~~vAiK~l~~~~~-----~~~~~~~~Ei~il~~l~HpnIv~-l~g~~~~~ 461 (701)
...+.|.+.+.||+|+||.||+|++. ++.||||++..... .....|.+|+++|+.++|+|++. +++. ..
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--~~ 92 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--GK 92 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--CC
Confidence 45678999999999999999999873 45589998753311 12345899999999999999985 5442 45
Q ss_pred CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCCeeEcCCCcEEEEeeccc
Q 005343 462 GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDL-KPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 462 ~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDL-Kp~NILl~~~~~~KL~DFGla 540 (701)
.++||||++|++|.. + . . .. ...++.+++.||.|||+.+ |+|||| ||+|||++.++.+||+|||+|
T Consensus 93 ~~LVmE~~~G~~L~~-~-~-~----~~---~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDFGlA 159 (365)
T PRK09188 93 DGLVRGWTEGVPLHL-A-R-P----HG---DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDFQLA 159 (365)
T ss_pred cEEEEEccCCCCHHH-h-C-c----cc---hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEECccc
Confidence 699999999999963 2 1 1 11 1357889999999999999 999999 999999999999999999999
Q ss_pred cccCCCCCccc--ccccccccccCCCccCcccccCCC
Q 005343 541 RLVPPSAADTI--TQYHMTTAAGTFCYIDPEYQQTGM 575 (701)
Q Consensus 541 ~~~~~~~~~~~--~~~~~~~~~gt~~Y~aPE~~~~~~ 575 (701)
+.+........ .....+...+++.|++||++....
T Consensus 160 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~ 196 (365)
T PRK09188 160 SVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE 196 (365)
T ss_pred eecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence 98755432111 111225778999999999876543
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=8.6e-23 Score=219.21 Aligned_cols=254 Identities=23% Similarity=0.303 Sum_probs=189.7
Q ss_pred CceeeeeeeecCceeEEEEEECCc---eEEEEEeCCCCCCChHHHHHHHHHHHhCCC----CcEEEEecee---cCCCce
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHT---SVAIKVLGPDISQGPRQFKQEVEILGSMRH----TNMVILLGAC---PEYGCL 464 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~---~vAiK~l~~~~~~~~~~~~~Ei~il~~l~H----pnIv~l~g~~---~~~~~l 464 (701)
.|.+.++||+|+||.||+|..... .+|+|+...........+..|+.++..+.. +++..+++.. ....++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999998554 599998876644433478899999999873 4666776665 234589
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC-----CcEEEEeecc
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN-----YVSKISDVGL 539 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~-----~~~KL~DFGl 539 (701)
||+.+ |.+|.++..... ...|+..+.++|+.|++.+|.+||+.| +|||||||+|+++... ..+.|.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99998 899999664444 567999999999999999999999999 9999999999999764 4689999999
Q ss_pred ccccC--CCCCccccccc--ccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCc
Q 005343 540 ARLVP--PSAADTITQYH--MTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGT 613 (701)
Q Consensus 540 a~~~~--~~~~~~~~~~~--~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~ 613 (701)
++.+. ..........+ .....||..|.++....+...+.+.|+||++.++.+|+.|..|+..... ....+....
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~ 253 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDP 253 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHh
Confidence 98332 22111111111 2346699999999999999999999999999999999999988854331 111111111
Q ss_pred cccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 614 FSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 614 ~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
....... .....+..+..+...+-..+..++|+...+...
T Consensus 254 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~ 293 (322)
T KOG1164|consen 254 RKLLTDR----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL 293 (322)
T ss_pred hhhcccc----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence 1111111 112223457788888888999999999888754
No 410
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4.1e-22 Score=202.44 Aligned_cols=272 Identities=19% Similarity=0.217 Sum_probs=198.6
Q ss_pred CceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCC-CCcEEEE--eceecCCCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMR-HTNMVIL--LGACPEYGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l--~g~~~~~~~lV~Ey~ 469 (701)
+|++.++||+|.||.++.|.. ++.+||||.-... ...-++..|....+.|. .+.|-.. +|-|.-+..||+|++
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 699999999999999999986 7889999975332 34457888888888884 5666544 455666678999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-----CCcEEEEeeccccccC
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-----NYVSKISDVGLARLVP 544 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-----~~~~KL~DFGla~~~~ 544 (701)
|.||+|++.-. ...|+..+...||.|++.-++|+|++. +|.|||||+|+||.. ...+.|.|||+|+.+.
T Consensus 107 -GPSLEDLFD~C--gR~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 107 -GPSLEDLFDLC--GRRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred -CcCHHHHHHHh--cCcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 99999977433 346999999999999999999999999 999999999999964 3467899999999875
Q ss_pred CCCCc-ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHcCccccccCcc
Q 005343 545 PSAAD-TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQ--VEQAIRNGTFSELLDPT 621 (701)
Q Consensus 545 ~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~--~~~~i~~~~~~~~ld~~ 621 (701)
...+. .+......+..||..||+-....+...+.+.|+-|||-+|+.+|-|..||.+..- ..+. +..+.+..
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~k-----YeKIGe~K 255 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEK-----YEKIGETK 255 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHH-----HHHhcccc
Confidence 44332 3333345778899999999999999999999999999999999999999975431 1111 11111111
Q ss_pred CC----CCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhcccccccCCCCCccc
Q 005343 622 VT----GWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGFENAENKNDNIVV 679 (701)
Q Consensus 622 ~~----~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~~~~~~~~~~~~~ 679 (701)
.. ......+.+|...+.-.-.++-.+-|+..-+-.-...-|.+.++.......|.+..
T Consensus 256 r~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW~~ln 317 (449)
T KOG1165|consen 256 RSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDWMGLN 317 (449)
T ss_pred ccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccccccC
Confidence 10 11122344677888888888999999976543222222334444444444444443
No 411
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=6.9e-22 Score=192.95 Aligned_cols=250 Identities=21% Similarity=0.283 Sum_probs=188.6
Q ss_pred hhcCceeeeeeeecCceeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCC-cEEEEecee--cCCCceEE
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHT-NMVILLGAC--PEYGCLVY 466 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hp-nIv~l~g~~--~~~~~lV~ 466 (701)
..+.|.++++||.|+||.+|.|.. .+..||||+-.... ...++..|..+...|++- .|..+..+. .++..+||
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVM 90 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVM 90 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhccccccceeee
Confidence 346899999999999999999987 67789999875543 334678899999988763 343344343 44568999
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC---CcEEEEeecccccc
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN---YVSKISDVGLARLV 543 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~---~~~KL~DFGla~~~ 543 (701)
+.+ |.||++++.- ....|+..+.+-++-|++.-++|+|..+ +|||||||+|+|+.-+ ..+.|+|||||+.+
T Consensus 91 dLL-GPsLEdLfnf--C~R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 91 DLL-GPSLEDLFNF--CSRRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred ecc-CccHHHHHHH--HhhhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEEeccchhhh
Confidence 999 9999997743 2345889999999999999999999999 9999999999999754 45689999999877
Q ss_pred CCCCCc-ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHH-----HHHHHcCccccc
Q 005343 544 PPSAAD-TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQV-----EQAIRNGTFSEL 617 (701)
Q Consensus 544 ~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~-----~~~i~~~~~~~~ 617 (701)
-..... .+.........||..|.+-..+.+...+.+.|+-|+|.+|..+.-|..||.+-... ...|.+.+..-.
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCC
Confidence 443322 22333456788999999988888888899999999999999999999999754321 112222222222
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhh
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVS 653 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~ 653 (701)
+.....++|. ++.-.+.-|-.+.-.+-|+..-
T Consensus 245 ie~LC~G~P~----EF~myl~Y~R~L~F~E~Pdy~y 276 (341)
T KOG1163|consen 245 IEVLCKGFPA----EFAMYLNYCRGLGFEEKPDYMY 276 (341)
T ss_pred HHHHhCCCcH----HHHHHHHHHhhcCCCCCCcHHH
Confidence 2222234554 4788889999999999999643
No 412
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.85 E-value=1.9e-21 Score=195.97 Aligned_cols=170 Identities=19% Similarity=0.219 Sum_probs=134.2
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHH---------HHHHHHHHHhCCCCcEEEEeceec---
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQ---------FKQEVEILGSMRHTNMVILLGACP--- 459 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~---------~~~Ei~il~~l~HpnIv~l~g~~~--- 459 (701)
..++|++.+.||.|+||.||....++..+|||++.......... +.+|+..+.++.||+|..+.+++.
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~ 108 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAE 108 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeecc
Confidence 56899999999999999999987777789999998765444333 678999999999999988877642
Q ss_pred -------CCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 460 -------EYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 460 -------~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
...+|||||++|.+|.+.. .++. ....+++.+|..||..| ++|||+||+||+++.+| +
T Consensus 109 ~~~~~~~~~~~lvmEyi~G~tL~~~~-------~~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 109 RKTLRYAHTYIMLIEYIEGVELNDMP-------EISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred cccccccCCeEEEEEEECCccHHHhh-------hccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCCC-E
Confidence 2357999999999998763 1222 24669999999999999 99999999999999988 9
Q ss_pred EEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHh
Q 005343 533 KISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLIT 594 (701)
Q Consensus 533 KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~ellt 594 (701)
+|+|||.......... ...+.....|+.++|+||||++|..+..
T Consensus 174 ~liDfg~~~~~~e~~a------------------~d~~vler~y~~~~di~~lg~~~~~~~~ 217 (232)
T PRK10359 174 RIIDLSGKRCTAQRKA------------------KDRIDLERHYGIKNEIKDLGYYLLIYKK 217 (232)
T ss_pred EEEECCCcccccchhh------------------HHHHHHHhHhcccccccceeEeehHHHH
Confidence 9999998765421110 0114555567789999999999876543
No 413
>PRK15456 universal stress protein UspG; Provisional
Probab=99.84 E-value=1.1e-20 Score=178.16 Aligned_cols=129 Identities=16% Similarity=0.103 Sum_probs=101.5
Q ss_pred CCEEEEEeCCCc--chHHHHHHHHHhccCCCCeEEEEEEecCCCCCC--CCCC--C------hHHHHHHHHHHHHHHhhc
Q 005343 21 NAITAVAIDADK--SSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPR--GRPA--T------NDELQKLFLPYRGLFARK 88 (701)
Q Consensus 21 ~~~IlVavD~s~--~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~--~~~~--~------~~~~~~~l~~~~~~~~~~ 88 (701)
.++||||||||+ .|.+|++||+.++.. +++|++|||.++..... .... . .+..++.++.+...+...
T Consensus 2 ~~~ILv~vD~S~~~~s~~al~~A~~la~~-~~~l~llhv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 80 (142)
T PRK15456 2 YKTIIMPVDVFEMELSDKAVRHAEFLAQD-DGVIHLLHVLPGSASLSLHRFAADVRRFEEHLQHEAEERLQTMVSHFTID 80 (142)
T ss_pred CccEEEeccCCchhHHHHHHHHHHHHHhc-CCeEEEEEEecCcccccccccccchhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 479999999994 899999999998876 46999999998742111 1011 0 133445566665555445
Q ss_pred CCeeeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 89 RILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 89 ~v~~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
+++++.++.. |+|++.|+++|+++++|+||||+||++ +.+.|+ |||+++|+++++ |||+||.
T Consensus 81 ~~~v~~~v~~-G~~~~~I~~~a~~~~~DLIVmG~~g~~-~~~~ll-GS~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 81 PSRIKQHVRF-GSVRDEVNELAEELGADVVVIGSRNPS-ISTHLL-GSNASSVIRHAN--LPVLVVR 142 (142)
T ss_pred CcceEEEEcC-CChHHHHHHHHhhcCCCEEEEcCCCCC-ccceec-CccHHHHHHcCC--CCEEEeC
Confidence 7788888877 799999999999999999999999986 777555 999999999998 9999984
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.4e-21 Score=223.96 Aligned_cols=262 Identities=20% Similarity=0.224 Sum_probs=188.1
Q ss_pred eeeeeeeecCceeEEEEEE--CCceEEEEEeCCC--CCCChH----HHHHHHHHHHhCCCCcEEEEeceecCCC--ceEE
Q 005343 397 SISRKIGEGGYGPVYKAQL--DHTSVAIKVLGPD--ISQGPR----QFKQEVEILGSMRHTNMVILLGACPEYG--CLVY 466 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~--~~~~vAiK~l~~~--~~~~~~----~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV~ 466 (701)
.....+|.|+||.|+.... ....++.|..... ...... .+..|+.+-..+.|||++..+..+.+.. .-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 4567899999998887765 2222444433211 111111 2566788888899999987776653322 3349
Q ss_pred eecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 467 EYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 467 Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
|||++ +|..++... ..++...+-.++.|++.|+.|||..| |.||||||+|++++.+|.+||+|||.+..+...
T Consensus 401 E~~~~-Dlf~~~~~~---~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN---GKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hcccH-HHHHHHhcc---cccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 99999 999988543 34677788889999999999999999 999999999999999999999999999776433
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCc-hhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGV-KSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~-~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
... ........+|+..|+|||.+....|++ ..||||.|+++..|++|+.||.....-++.........-.......+
T Consensus 474 ~e~--~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~ 551 (601)
T KOG0590|consen 474 WEK--NIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPN 551 (601)
T ss_pred cch--hhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChH
Confidence 211 112346789999999999999999976 68999999999999999999865543222110000000000000111
Q ss_pred C--HHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHHHhccc
Q 005343 626 P--VEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRLRDLGF 667 (701)
Q Consensus 626 p--~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l~~~~~ 667 (701)
+ ...+.....++-+||+++|..|-++.+|+..+|++--+.|.
T Consensus 552 ~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~~c~ 595 (601)
T KOG0590|consen 552 RLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIECCH 595 (601)
T ss_pred HHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcceEE
Confidence 1 23344578999999999999999999999999999766554
No 415
>PRK15005 universal stress protein F; Provisional
Probab=99.83 E-value=3.3e-20 Score=175.07 Aligned_cols=130 Identities=15% Similarity=0.123 Sum_probs=102.4
Q ss_pred CCEEEEEeCCCcc--hHHHHHHHHHhccCCCCeEEEEEEecCCCCCC--CC--CC--C--h---HHHHHHHHHHHHHHhh
Q 005343 21 NAITAVAIDADKS--SQYAVKWAVDNLLNETSQYVLLHVRNHSSNPR--GR--PA--T--N---DELQKLFLPYRGLFAR 87 (701)
Q Consensus 21 ~~~IlVavD~s~~--S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~--~~--~~--~--~---~~~~~~l~~~~~~~~~ 87 (701)
.++||||+|||+. |.+|++||++++...|++|+++||+++.+... +. .. . . +..++.++.+...+..
T Consensus 2 ~~~ILv~~D~s~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 81 (144)
T PRK15005 2 NRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLPYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKL 81 (144)
T ss_pred CccEEEecCCCchhHHHHHHHHHHHHHhccCCeEEEEEEEccCcccccccccccccchHHHHHHHHHHHHHHHHHHHhCC
Confidence 4789999999988 58999999999999999999999998642111 11 00 0 1 2333445555544455
Q ss_pred cCCeeeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 88 KRILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 88 ~~v~~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
.++.++.++.. |+|++.|+++|+++++|+||||+| ++++.+.++ ||++++|++++| |||++|.
T Consensus 82 ~~~~~~~~v~~-G~p~~~I~~~a~~~~~DLIV~Gs~-~~~~~~~ll-GS~a~~vl~~a~--cpVlvVr 144 (144)
T PRK15005 82 PTDRVHVHVEE-GSPKDRILELAKKIPADMIIIASH-RPDITTYLL-GSNAAAVVRHAE--CSVLVVR 144 (144)
T ss_pred CCCceEEEEeC-CCHHHHHHHHHHHcCCCEEEEeCC-CCCchheee-cchHHHHHHhCC--CCEEEeC
Confidence 56778888877 799999999999999999999999 467888666 999999999999 9999983
No 416
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=5.3e-21 Score=189.31 Aligned_cols=247 Identities=22% Similarity=0.366 Sum_probs=186.6
Q ss_pred ceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCC--ChHHHHHHHHHHHhCCCCcEEEEeceec--CCCceEEeecCC
Q 005343 396 FSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQ--GPRQFKQEVEILGSMRHTNMVILLGACP--EYGCLVYEYMEN 471 (701)
Q Consensus 396 f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~ 471 (701)
..++-+|.+...|+.|+|++.+..++.|++...... ..+.|..|.-.|+-+.||||+.++|+|. .+..++..||+.
T Consensus 192 lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~ 271 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPF 271 (448)
T ss_pred hhhhhhhccCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccc
Confidence 344567899999999999999999999988765422 2356999999999999999999999994 455788999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeec-CCCCCCeeEcCCCcEEEEeeccccccCCCCCcc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHR-DLKPANILLDQNYVSKISDVGLARLVPPSAADT 550 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHr-DLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~ 550 (701)
|||...|+... .-...-.+..+++.+++.|+.|||+..| +|-| -|.+..+++|.+.+.+|+ .+-+++
T Consensus 272 gslynvlhe~t-~vvvd~sqav~faldiargmaflhslep--~ipr~~lns~hvmidedltaris-mad~kf-------- 339 (448)
T KOG0195|consen 272 GSLYNVLHEQT-SVVVDHSQAVRFALDIARGMAFLHSLEP--MIPRFYLNSKHVMIDEDLTARIS-MADTKF-------- 339 (448)
T ss_pred hHHHHHHhcCc-cEEEecchHHHHHHHHHhhHHHHhhcch--hhhhhhcccceEEecchhhhhee-ccccee--------
Confidence 99999996543 2345667788899999999999999874 5544 588999999999888774 111111
Q ss_pred cccccccccccCCCccCcccccCCCC---CchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCH
Q 005343 551 ITQYHMTTAAGTFCYIDPEYQQTGML---GVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPV 627 (701)
Q Consensus 551 ~~~~~~~~~~gt~~Y~aPE~~~~~~~---~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~ 627 (701)
........-.+.|++||.++..+- -..+|+|||+++||||.|...||......+--..- .+.......|.
T Consensus 340 --sfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmki-----aleglrv~ipp 412 (448)
T KOG0195|consen 340 --SFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKI-----ALEGLRVHIPP 412 (448)
T ss_pred --eeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhh-----hhccccccCCC
Confidence 011223345788999998877653 34789999999999999999999766554332221 01111223466
Q ss_pred HHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 628 EAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 628 ~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
..+..+.+|+.-|+..||.+||.+..|+ +-+.++
T Consensus 413 gis~hm~klm~icmnedpgkrpkfdmiv-pilekm 446 (448)
T KOG0195|consen 413 GISRHMNKLMNICMNEDPGKRPKFDMIV-PILEKM 446 (448)
T ss_pred CccHHHHHHHHHHhcCCCCcCCCcceeh-hhHHHh
Confidence 6777899999999999999999998775 556554
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.83 E-value=1.5e-20 Score=186.21 Aligned_cols=138 Identities=20% Similarity=0.173 Sum_probs=106.6
Q ss_pred eeeeeecCceeEEEEEE-CCceEEEEEeCCCCCCC---------hH-----------------HHHHHHHHHHhCCCCcE
Q 005343 399 SRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQG---------PR-----------------QFKQEVEILGSMRHTNM 451 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~---------~~-----------------~~~~Ei~il~~l~HpnI 451 (701)
...||+|+||.||+|.. ++..||||+++...... .. ...+|+.++..+.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999998 57789999997653211 01 12459999999987665
Q ss_pred EEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHH-hhcCCCCeeecCCCCCCeeEcCCC
Q 005343 452 VILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFL-HQNKPEPLVHRDLKPANILLDQNY 530 (701)
Q Consensus 452 v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~~iiHrDLKp~NILl~~~~ 530 (701)
.....+.....+|||||++|++|...... ..++++.....++.|++.+|.|| |+.+ |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~~~~iVmE~i~g~~l~~~~~~---~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILLKSHVLVMEFIGDDGWAAPRLK---DAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEecCCEEEEEEeCCCCCcchhhh---cCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE-CC
Confidence 33222223345899999998877654322 23688899999999999999999 6888 99999999999998 47
Q ss_pred cEEEEeecccccc
Q 005343 531 VSKISDVGLARLV 543 (701)
Q Consensus 531 ~~KL~DFGla~~~ 543 (701)
.++|+|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 418
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=5.1e-20 Score=181.99 Aligned_cols=189 Identities=15% Similarity=0.101 Sum_probs=140.6
Q ss_pred eeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCCh----HHHHHHHHHHHhCC-CCcEEEEeceecCCCceEEeecCC
Q 005343 397 SISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGP----RQFKQEVEILGSMR-HTNMVILLGACPEYGCLVYEYMEN 471 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~----~~~~~Ei~il~~l~-HpnIv~l~g~~~~~~~lV~Ey~~~ 471 (701)
.+...|++|+||+||.+...+..++.+.+........ ..+.+|+++|++|. |+++..++++ +..+++|||+.|
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G 82 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAG 82 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecC
Confidence 4567899999999998888888888887765543111 14789999999995 5778888876 346899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCC-CCCCeeEcCCCcEEEEeeccccccCCCCCc-
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDL-KPANILLDQNYVSKISDVGLARLVPPSAAD- 549 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDL-Kp~NILl~~~~~~KL~DFGla~~~~~~~~~- 549 (701)
.+|...+.. ....++.|++.+|.++|..| |+|||| ||+|||++.++.++|+|||+|....+...-
T Consensus 83 ~~L~~~~~~----------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~ 149 (218)
T PRK12274 83 AAMYQRPPR----------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWM 149 (218)
T ss_pred ccHHhhhhh----------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHH
Confidence 988654311 11347789999999999999 999999 799999999999999999999865433210
Q ss_pred ------ccccccccccccCCCccCccccc--CCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005343 550 ------TITQYHMTTAAGTFCYIDPEYQQ--TGMLGVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 550 ------~~~~~~~~~~~gt~~Y~aPE~~~--~~~~~~~sDvwSlGvil~elltG~~pf~ 600 (701)
............++.|++|+... ...--...++++-|+-+|.++|+..|+-
T Consensus 150 r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 150 RLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 00000011233678889997432 2222357799999999999999997753
No 419
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.82 E-value=8.5e-20 Score=180.98 Aligned_cols=139 Identities=19% Similarity=0.182 Sum_probs=109.7
Q ss_pred eeeeeecCceeEEEEEEC-CceEEEEEeCCCCCC---------------------C-----hHHHHHHHHHHHhCCCCcE
Q 005343 399 SRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQ---------------------G-----PRQFKQEVEILGSMRHTNM 451 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~---------------------~-----~~~~~~Ei~il~~l~HpnI 451 (701)
...||+|+||.||+|.+. ++.||||+++..... . ...+..|...+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999984 788999999876321 0 1123678999999999887
Q ss_pred EEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCC
Q 005343 452 VILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNY 530 (701)
Q Consensus 452 v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~ 530 (701)
.....+.....+|||||++|+++...... ...++......++.|++.+|.+||+ .| |+||||||+|||++ ++
T Consensus 82 ~~p~~~~~~~~~lVmE~~~g~~~~~~~l~---~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll~-~~ 154 (190)
T cd05145 82 PVPEPILLKKNVLVMEFIGDDGSPAPRLK---DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILYH-DG 154 (190)
T ss_pred CCceEEEecCCEEEEEEecCCCchhhhhh---hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEEE-CC
Confidence 54333333446899999988865443222 1346778889999999999999999 88 99999999999999 88
Q ss_pred cEEEEeeccccccC
Q 005343 531 VSKISDVGLARLVP 544 (701)
Q Consensus 531 ~~KL~DFGla~~~~ 544 (701)
.++|+|||++..++
T Consensus 155 ~~~liDFG~a~~~~ 168 (190)
T cd05145 155 KPYIIDVSQAVELD 168 (190)
T ss_pred CEEEEEcccceecC
Confidence 99999999998764
No 420
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=4.6e-20 Score=211.09 Aligned_cols=249 Identities=22% Similarity=0.281 Sum_probs=179.6
Q ss_pred CceeeeeeeecCceeEEEEEECCceEEEEEeCCCC-CCChHHHHHHHHH--HHhCCCCcEEEEecee--cCCCceEEeec
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDI-SQGPRQFKQEVEI--LGSMRHTNMVILLGAC--PEYGCLVYEYM 469 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~-~~~~~~~~~Ei~i--l~~l~HpnIv~l~g~~--~~~~~lV~Ey~ 469 (701)
+|...+.||.+.|=+|.+|.+++..|+||++-+.. .-..+.|.++++- ...++|||++++.-.- ....|||-+|+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyv 103 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYV 103 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHH
Confidence 57788899999999999999988889999986654 3445555554443 4456899999886553 33458888998
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc--CCCC
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV--PPSA 547 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~--~~~~ 547 (701)
. -+|.|+| ...+-+..-+..-|+.|++.||.-+|..| |+|||||.+|||++.-.=+.|+||..-+.. +.+.
T Consensus 104 k-hnLyDRl---STRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDN 176 (1431)
T KOG1240|consen 104 K-HNLYDRL---STRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDN 176 (1431)
T ss_pred h-hhhhhhh---ccchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCCCC
Confidence 4 4888888 33345677788889999999999999999 999999999999998878899999765422 2221
Q ss_pred CcccccccccccccCCCccCcccccCC----------C-CCchhhHHHHHHHHHHHHh-CCCCCCCchHHHHHHHcCccc
Q 005343 548 ADTITQYHMTTAAGTFCYIDPEYQQTG----------M-LGVKSDLYSLGVVLLQLIT-ARPAMGLSHQVEQAIRNGTFS 615 (701)
Q Consensus 548 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~----------~-~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~i~~~~~~ 615 (701)
.... .+.+.+...-.+|+|||.|... . .++++||||+||+++||++ |+|||.+.+.... +.|. .
T Consensus 177 Padf-~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aY--r~~~-~ 252 (1431)
T KOG1240|consen 177 PADF-TFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAY--RSGN-A 252 (1431)
T ss_pred cccc-eEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhH--hccC-c
Confidence 1111 1222233344689999965442 1 6789999999999999987 7999976655422 2221 1
Q ss_pred cccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhH
Q 005343 616 ELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLP 657 (701)
Q Consensus 616 ~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~ 657 (701)
......+...+. ..+.+++..|++.+|..|-++.+.|..
T Consensus 253 ~~~e~~Le~Ied---~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 253 DDPEQLLEKIED---VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred cCHHHHHHhCcC---ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 111111111111 148899999999999999999998854
No 421
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=99.80 E-value=2e-19 Score=169.85 Aligned_cols=129 Identities=16% Similarity=0.163 Sum_probs=97.7
Q ss_pred CCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCC-CCC--CCCh----HHHHHHHHHHHHHHhhcCCeee
Q 005343 21 NAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNP-RGR--PATN----DELQKLFLPYRGLFARKRILAR 93 (701)
Q Consensus 21 ~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~-~~~--~~~~----~~~~~~l~~~~~~~~~~~v~~~ 93 (701)
.++||||+|+|+.|..||+||+.++...|++|++|||..+.... .+. .... ...++....+..++...|+.+.
T Consensus 3 ~~~ILvavD~S~~s~~al~~a~~la~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 82 (144)
T PRK15118 3 YKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYSDLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPIT 82 (144)
T ss_pred ceEEEEEccCChhHHHHHHHHHHHHHhhCCEEEEEEEccChhhhhhhhhhcchHHHHHHHHHHHHHHHHHHHHhCCCCce
Confidence 47999999999999999999999999899999999995432111 110 0001 1122233344555566788876
Q ss_pred EEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 94 EVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 94 ~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
..++..|+|+++|+++|+++++|+||||+|| +++.+ + ||||++|+++|+ |||++|.
T Consensus 83 ~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~-~~~~~--l-gSva~~v~~~a~--~pVLvv~ 138 (144)
T PRK15118 83 ETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ-DFWSK--L-MSSARQLINTVH--VDMLIVP 138 (144)
T ss_pred EEEEEecCHHHHHHHHHHHhCCCEEEEeCcc-cHHHH--H-HHHHHHHHhhCC--CCEEEec
Confidence 5555458999999999999999999999997 44443 4 899999999998 9999997
No 422
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=99.80 E-value=5.1e-19 Score=162.55 Aligned_cols=123 Identities=20% Similarity=0.214 Sum_probs=106.3
Q ss_pred EEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHhhcCCeeeEEEEEcCCh
Q 005343 23 ITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFARKRILAREVVLQDIDV 102 (701)
Q Consensus 23 ~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~~~~~~ 102 (701)
+||||||+|+.+++|++||+.++...++.|++|||.++... ...++.++.++.+...+...++. ..++.+++|
T Consensus 1 ~Ilv~vd~s~~s~~al~~a~~la~~~~~~l~ll~v~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~ 73 (124)
T cd01987 1 RILVCISGGPNAERLIRRAARLADRLKAPWYVVYVETPRLN-----RLSEAERRRLAEALRLAEELGAE--VVTLPGDDV 73 (124)
T ss_pred CEEEEECCCcchHHHHHHHHHHHHHhCCCEEEEEEecCccc-----cCCHHHHHHHHHHHHHHHHcCCE--EEEEeCCcH
Confidence 59999999999999999999999999999999999986321 12356677888888888877765 345566899
Q ss_pred hHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEE
Q 005343 103 SSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYII 154 (701)
Q Consensus 103 ~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV 154 (701)
+++|+++|+++++|+||||+||++++.+.|+ ||++++|+++| ..|+|+||
T Consensus 74 ~~~I~~~~~~~~~dllviG~~~~~~~~~~~~-Gs~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 74 AEAIVEFAREHNVTQIVVGKSRRSRWRELFR-GSLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHHHHHHHcCCCEEEeCCCCCchHHHHhc-ccHHHHHHHhC-CCCeEEEe
Confidence 9999999999999999999999999999766 99999999999 24999997
No 423
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.79 E-value=2.9e-20 Score=204.08 Aligned_cols=231 Identities=25% Similarity=0.269 Sum_probs=179.7
Q ss_pred eeecCceeEEEEEE-----CCceEEEEEeCCCCCCC--hHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEEeecCC
Q 005343 402 IGEGGYGPVYKAQL-----DHTSVAIKVLGPDISQG--PRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVYEYMEN 471 (701)
Q Consensus 402 IG~G~fg~Vyk~~~-----~~~~vAiK~l~~~~~~~--~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~ 471 (701)
+|.|.||.|++++- .+..+|+|++++..... ......|..++..++ ||.+|.+.-.+.. ..+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 79999999997653 45568999886653211 124567888888887 9999999877643 45899999999
Q ss_pred CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCccc
Q 005343 472 GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTI 551 (701)
Q Consensus 472 gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~ 551 (701)
|.|...+.. ...+.......+...++.++.++|+.+ |+|||+|++||+++.+|++|+.|||+++..-..
T Consensus 82 g~lft~l~~---~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~----- 150 (612)
T KOG0603|consen 82 GDLFTRLSK---EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE----- 150 (612)
T ss_pred chhhhcccc---CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhh-----
Confidence 999887743 334666777778889999999999999 999999999999999999999999999865221
Q ss_pred ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHH
Q 005343 552 TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAAL 631 (701)
Q Consensus 552 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~ 631 (701)
...|||..|||||++. .....+|+||||++.+||+||-.||+. .....+.. . -...|.+...
T Consensus 151 -----~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-~~~~~Il~-~---------~~~~p~~l~~ 212 (612)
T KOG0603|consen 151 -----KIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-DTMKRILK-A---------ELEMPRELSA 212 (612)
T ss_pred -----hhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-HHHHHHhh-h---------ccCCchhhhH
Confidence 1129999999999988 567789999999999999999999987 22222221 1 1245667777
Q ss_pred HHHHHHHHhhccCcCCCCCh-----hhhhhHHHHH
Q 005343 632 SIAKLALQCCELRKRDRPDL-----VSVVLPELIR 661 (701)
Q Consensus 632 ~l~~li~~cl~~~P~~RPt~-----~~vl~~~~~~ 661 (701)
....++..++..+|.+|--. .++..|.++.
T Consensus 213 ~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~ 247 (612)
T KOG0603|consen 213 EARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQ 247 (612)
T ss_pred HHHHHHHHHHhhCHHHHhccCcchhHHHhccchhe
Confidence 78999999999999998765 4555555444
No 424
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.79 E-value=8.6e-20 Score=208.98 Aligned_cols=223 Identities=24% Similarity=0.332 Sum_probs=158.0
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecCCCceEEeecC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEYGCLVYEYME 470 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~~lV~Ey~~ 470 (701)
.++|..+++|-.|+||.||.++++ .+++|+|+ +++. .+.+ .|+.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~-----lilR--nilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQN-----LILR--NILTFAGNPFVV------------------ 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhcc-cccc-----hhhh--ccccccCCccee------------------
Confidence 467999999999999999999987 55688853 3221 0110 033333344333
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCc-
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAAD- 549 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~- 549 (701)
|+-.+.+ .+.++++. +++.+++|||+.+ |+|||+||+|.|++.-|++|++|||+.+..-.....
T Consensus 136 -gDc~tll---k~~g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 -GDCATLL---KNIGPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred -chhhhhc---ccCCCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 4444444 22234443 3488999999999 999999999999999999999999998754222111
Q ss_pred --------ccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch---HHHHHHHcCcccccc
Q 005343 550 --------TITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH---QVEQAIRNGTFSELL 618 (701)
Q Consensus 550 --------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~---~~~~~i~~~~~~~~l 618 (701)
...+......+||+.|+|||++....|+..+|||++|+|+||++.|..||.++. .+.+.+....
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i----- 275 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDI----- 275 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhc-----
Confidence 111223356799999999999999999999999999999999999998886652 2333333221
Q ss_pred CccCCCCCH---HHHHHHHHHHHHhhccCcCCCCC---hhhhhhHHHHHHHhcc
Q 005343 619 DPTVTGWPV---EAALSIAKLALQCCELRKRDRPD---LVSVVLPELIRLRDLG 666 (701)
Q Consensus 619 d~~~~~~p~---~~~~~l~~li~~cl~~~P~~RPt---~~~vl~~~~~~l~~~~ 666 (701)
.||. ..+.+.++++.+.|..+|..|-- ..+|-.|.+++..|+.
T Consensus 276 -----~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~ 324 (1205)
T KOG0606|consen 276 -----EWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK 324 (1205)
T ss_pred -----cccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence 1221 12335899999999999999954 5667788888877765
No 425
>PRK09982 universal stress protein UspD; Provisional
Probab=99.79 E-value=3e-19 Score=168.61 Aligned_cols=126 Identities=13% Similarity=0.206 Sum_probs=97.4
Q ss_pred CCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCC-CC--CCCCh-------HHHHHHHHHHHHHHhhcCC
Q 005343 21 NAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNP-RG--RPATN-------DELQKLFLPYRGLFARKRI 90 (701)
Q Consensus 21 ~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~-~~--~~~~~-------~~~~~~l~~~~~~~~~~~v 90 (701)
.++||||||+|+.|.+|+++|+.++...+++|+++||.++.... .. ..... +..++.+..+...+. ..
T Consensus 3 ~k~ILvavD~S~~s~~al~~A~~lA~~~~a~l~llhV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~ 80 (142)
T PRK09982 3 YKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLSELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQ--WP 80 (142)
T ss_pred ceEEEEEecCCcchHHHHHHHHHHHHHhCCeEEEEEEccCcchhchhhhccchHHHHHHHHHHHHHHHHHHHHhcC--CC
Confidence 47999999999999999999999999999999999999764211 11 11111 223334444443332 23
Q ss_pred eeeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 91 LAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 91 ~~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
.++..+.. |+|++.|+++|++.++|+||||+| ++++.+.| | ||++|+++++ |||++|.
T Consensus 81 ~~~~~v~~-G~p~~~I~~~A~~~~aDLIVmG~~-~~~~~~~~--~-va~~V~~~s~--~pVLvv~ 138 (142)
T PRK09982 81 KTKLRIER-GEMPETLLEIMQKEQCDLLVCGHH-HSFINRLM--P-AYRGMINKMS--ADLLIVP 138 (142)
T ss_pred cceEEEEe-cCHHHHHHHHHHHcCCCEEEEeCC-hhHHHHHH--H-HHHHHHhcCC--CCEEEec
Confidence 45556666 899999999999999999999987 88998844 5 9999999998 9999996
No 426
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=99.78 E-value=1.8e-18 Score=160.11 Aligned_cols=130 Identities=15% Similarity=0.205 Sum_probs=112.5
Q ss_pred EEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCC--CCCCChHHHHHHHHHHHHHHhhcCCeeeEEEEEcC
Q 005343 23 ITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPR--GRPATNDELQKLFLPYRGLFARKRILAREVVLQDI 100 (701)
Q Consensus 23 ~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~~~~ 100 (701)
+||||+|+++.+..||++|..++...++.|+++||.+++.... ......+..++.++.+..++...|+.++..+..+|
T Consensus 1 ~ILv~vd~s~~~~~~l~~a~~la~~~~~~v~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 80 (132)
T cd01988 1 RILVPVANPNTARDLLELAAALARAQNGEIIPLNVIEVPNHSSPSQLEVNVQRARKLLRQAERIAASLGVPVHTIIRIDH 80 (132)
T ss_pred CEEEecCCchhHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCCceEEEEEecC
Confidence 5999999999999999999999999999999999998642211 11112356678889999999999999998888778
Q ss_pred ChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 101 DVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 101 ~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
+|.++|+++|+++++|+||||+++++++.+.++ ||++++|+++++ |||++|.
T Consensus 81 ~~~~~I~~~a~~~~~dlIV~G~~~~~~~~~~~l-Gs~~~~v~~~~~--~pvlvv~ 132 (132)
T cd01988 81 DIASGILRTAKERQADLIIMGWHGSTSLRDRLF-GGVIDQVLESAP--CDVAVVK 132 (132)
T ss_pred CHHHHHHHHHHhcCCCEEEEecCCCCCccceec-CchHHHHHhcCC--CCEEEeC
Confidence 999999999999999999999999999977666 999999999998 9999983
No 427
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=5.7e-18 Score=175.74 Aligned_cols=230 Identities=21% Similarity=0.286 Sum_probs=148.6
Q ss_pred CceeeeeeeecCceeEEEEEECC--ceEEEEEeCCCCCC---ChHHHHHHHHHHHhCCC---C-------c------EEE
Q 005343 395 YFSISRKIGEGGYGPVYKAQLDH--TSVAIKVLGPDISQ---GPRQFKQEVEILGSMRH---T-------N------MVI 453 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~~~--~~vAiK~l~~~~~~---~~~~~~~Ei~il~~l~H---p-------n------Iv~ 453 (701)
.+.....||.|+|+.||.+++.. ..+|+|++...... ..+++.+|.-....+.+ | . ++.
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 35667899999999999999965 66999987655422 23456666655544332 1 1 222
Q ss_pred Eece---e----------cCCCceEEeecCCCChhhHhc---ccCC-CCCCChHHHHHHHHHHHHHHHHHhhcCCCCeee
Q 005343 454 LLGA---C----------PEYGCLVYEYMENGSLEDRLF---QKDN-SPPIHWSIRFKIAAEIATALLFLHQNKPEPLVH 516 (701)
Q Consensus 454 l~g~---~----------~~~~~lV~Ey~~~gsL~~~l~---~~~~-~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiH 516 (701)
+-+- + --+.+++|+-+ .++|.+++. .... ...+....+..+..|++..+++||..| +||
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 2110 0 11235677777 578877653 2222 233555667788899999999999999 999
Q ss_pred cCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC--------CCCCchhhHHHHHHH
Q 005343 517 RDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT--------GMLGVKSDLYSLGVV 588 (701)
Q Consensus 517 rDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~sDvwSlGvi 588 (701)
+||+|+|+|++.+|.++|+||+....... .+ .....+..|.+||.... -.++.+.|.|+||++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~-------~~--~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ 239 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT-------RY--RCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGIT 239 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE-------EE--EGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc-------ee--eccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHH
Confidence 99999999999999999999988765321 11 11344577999996533 247889999999999
Q ss_pred HHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCC
Q 005343 589 LLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDR 648 (701)
Q Consensus 589 l~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~R 648 (701)
+|.|++|..||+..... .. .+.....+. +.+..+..||..+|+.+|.+|
T Consensus 240 ly~lWC~~lPf~~~~~~------~~----~~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 240 LYSLWCGRLPFGLSSPE------AD----PEWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHSS-STCCCGGG------ST----SGGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHHccCCCCCCCcc------cc----ccccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999999999865421 00 001334455 777789999999999999988
No 428
>PRK10345 hypothetical protein; Provisional
Probab=99.76 E-value=4.1e-18 Score=170.87 Aligned_cols=132 Identities=17% Similarity=0.275 Sum_probs=103.8
Q ss_pred eeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCChHHHHHHHHHHHhC-----CCCcEEEEeceecCCC---c---eEE
Q 005343 399 SRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGPRQFKQEVEILGSM-----RHTNMVILLGACPEYG---C---LVY 466 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l~g~~~~~~---~---lV~ 466 (701)
...||+|+||.||. +. ....+||++........+.+.+|+.+++.+ .||||+.++|++.+.. + +|+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~ 84 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIA 84 (210)
T ss_pred cceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEe
Confidence 46899999999996 42 223579988776555667899999999999 6799999999996642 3 689
Q ss_pred ee--cCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHH-HHHhhcCCCCeeecCCCCCCeeEcC----CCcEEEEe-ec
Q 005343 467 EY--MENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATAL-LFLHQNKPEPLVHRDLKPANILLDQ----NYVSKISD-VG 538 (701)
Q Consensus 467 Ey--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL-~~LH~~~~~~iiHrDLKp~NILl~~----~~~~KL~D-FG 538 (701)
|| +.+|+|.+++.+. .+++. ..++.+++.++ .|||+++ ||||||||+|||++. ++.++|+| ||
T Consensus 85 e~~G~~~~tL~~~l~~~----~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg~G 155 (210)
T PRK10345 85 DFDGKPSITLTEFAEQC----RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDNIG 155 (210)
T ss_pred cCCCCcchhHHHHHHcc----cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence 99 5579999999442 25544 35678888887 8999999 999999999999974 34899999 55
Q ss_pred ccc
Q 005343 539 LAR 541 (701)
Q Consensus 539 la~ 541 (701)
...
T Consensus 156 ~~~ 158 (210)
T PRK10345 156 EST 158 (210)
T ss_pred Ccc
Confidence 443
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.74 E-value=9.5e-19 Score=188.92 Aligned_cols=184 Identities=27% Similarity=0.388 Sum_probs=141.4
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
+.++.|++|.-.+|.+.|.++......++.....++.|++.|+.| ++ .+|||+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhhe
Confidence 457999999999999999877777788899999999999999999 67 999999999999999999999999998
Q ss_pred cccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhC-CCCCCCchHHHHHHHcCccccccC
Q 005343 541 RLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITA-RPAMGLSHQVEQAIRNGTFSELLD 619 (701)
Q Consensus 541 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG-~~pf~~~~~~~~~i~~~~~~~~ld 619 (701)
...............++..+||.+||+||.+.+..|+.++||||||+||+||++- ..+|.. ......++.|.+...
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er-~~t~~d~r~g~ip~~-- 480 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER-IATLTDIRDGIIPPE-- 480 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH-HHhhhhhhcCCCChH--
Confidence 7764433222223356788999999999999999999999999999999999982 222211 111223344433210
Q ss_pred ccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 620 PTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 620 ~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
.+.++|. =..|+.+++...|.+||+....-.|.|
T Consensus 481 -~~~d~p~-----e~~ll~~lls~~p~~RP~~~~~~~~~~ 514 (516)
T KOG1033|consen 481 -FLQDYPE-----EYTLLQQLLSPSPEERPSAIEVALHEF 514 (516)
T ss_pred -HhhcCcH-----HHHHHHHhcCCCcccCchHHHHhhhhh
Confidence 1223333 358999999999999996665555544
No 430
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=99.74 E-value=3.6e-18 Score=157.97 Aligned_cols=132 Identities=24% Similarity=0.300 Sum_probs=101.0
Q ss_pred CCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCCh-------HHHHHHHHHHHHHHhhcCCeee
Q 005343 21 NAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATN-------DELQKLFLPYRGLFARKRILAR 93 (701)
Q Consensus 21 ~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~~~v~~~ 93 (701)
.++||||+|+++.+..|++||+.++...+++|++|||.++........... .............+...+....
T Consensus 2 ~~~Ilv~~d~~~~~~~al~~a~~la~~~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (140)
T PF00582_consen 2 YKRILVAIDGSEESRRALRFALELAKRSGAEITLLHVIPPPPQYSFSAAEDEESEEEAEEEEQARQAEAEEAEAEGGIVI 81 (140)
T ss_dssp TSEEEEEESSSHHHHHHHHHHHHHHHHHTCEEEEEEEEESCHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEE
T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHHhhCCeEEEEEeeccccccccccccccccccccchhhhhhhHHHHHHhhhcccee
Confidence 489999999999999999999999999999999999998741110000000 0000001111133445566666
Q ss_pred EEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 94 EVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 94 ~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
...+..+++.++|+++++++++|+||||+++++++.+.++ ||++++|++++| |||++|.
T Consensus 82 ~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~~~~~~~~-gs~~~~l~~~~~--~pVlvv~ 140 (140)
T PF00582_consen 82 EVVIESGDVADAIIEFAEEHNADLIVMGSRGRSGLERLLF-GSVAEKLLRHAP--CPVLVVP 140 (140)
T ss_dssp EEEEEESSHHHHHHHHHHHTTCSEEEEESSSTTSTTTSSS-HHHHHHHHHHTS--SEEEEEE
T ss_pred EEEEEeeccchhhhhccccccceeEEEeccCCCCccCCCc-CCHHHHHHHcCC--CCEEEeC
Confidence 6666669999999999999999999999999999999665 999999999999 9999983
No 431
>PRK10116 universal stress protein UspC; Provisional
Probab=99.73 E-value=1.8e-17 Score=156.00 Aligned_cols=130 Identities=11% Similarity=0.105 Sum_probs=101.0
Q ss_pred CCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCC--h---HHH-HHHHHHHHHHHhhcCCeeeE
Q 005343 21 NAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPAT--N---DEL-QKLFLPYRGLFARKRILARE 94 (701)
Q Consensus 21 ~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~--~---~~~-~~~l~~~~~~~~~~~v~~~~ 94 (701)
.++||||+|+|+.+..||++|+.++...|++|+++||.+++......... . +.. ++....+..++.+.|+..+.
T Consensus 3 ~~~ILv~~D~s~~s~~al~~A~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 82 (142)
T PRK10116 3 YSNILVAVAVTPESQQLLAKAVSIARPVNGKISLITLASDPEMYNQFAAPMLEDLRSVMQEETQSFLDKLIQDADYPIEK 82 (142)
T ss_pred CceEEEEccCCcchHHHHHHHHHHHHHhCCEEEEEEEccCcccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Confidence 48999999999999999999999999999999999998764221111110 1 111 11122334445566777665
Q ss_pred EEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 95 VVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 95 ~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
.++..|++.+.|+++|++.++|+||||+||++++.+. +||+++|+++++ ||||+|.
T Consensus 83 ~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~~~~~~---~s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 83 TFIAYGELSEHILEVCRKHHFDLVICGNHNHSFFSRA---SCSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred EEEecCCHHHHHHHHHHHhCCCEEEEcCCcchHHHHH---HHHHHHHHhcCC--CCEEEEe
Confidence 5555699999999999999999999999999999983 489999999998 9999997
No 432
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=2e-17 Score=193.50 Aligned_cols=196 Identities=22% Similarity=0.292 Sum_probs=155.7
Q ss_pred HHHHhhcCceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEE----Eec--eecC
Q 005343 388 EIEAATDYFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVI----LLG--ACPE 460 (701)
Q Consensus 388 ei~~~~~~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~----l~g--~~~~ 460 (701)
+.+.....|.+...||+|+||.||+|.. ++..||+|+-++... .+|.--.+++.+|+ |-+.. +.. .|.+
T Consensus 692 ~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk-~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 692 EFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLK-PQMLPSIMHISSAHVFQN 767 (974)
T ss_pred eeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhc-hhhhcchHHHHHHHccCC
Confidence 3344556799999999999999999998 556699999776543 33444455666666 33332 222 2366
Q ss_pred CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEc-------CCCcEE
Q 005343 461 YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLD-------QNYVSK 533 (701)
Q Consensus 461 ~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~-------~~~~~K 533 (701)
..+||+||.+.|+|.+++. ....++|.....++.|++.-+..||..+ |||+||||+|+||. .+.-++
T Consensus 768 ~S~lv~ey~~~Gtlld~~N---~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLIN---TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred cceeeeeccccccHHHhhc---cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceE
Confidence 6789999999999999984 5567899999999999999999999999 99999999999993 345689
Q ss_pred EEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCC
Q 005343 534 ISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARP 597 (701)
Q Consensus 534 L~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~ 597 (701)
|+|||.+-.+..-. ...++...++|-.+-.+|+..+..++..+|.|.|+-+++-||.|+.
T Consensus 842 lIDfG~siDm~lfp----~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 842 LIDFGRSIDMKLFP----DGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EEecccceeeeEcC----CCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999986542111 1234567788999999999999999999999999999999999973
No 433
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.73 E-value=2.7e-17 Score=163.78 Aligned_cols=129 Identities=22% Similarity=0.356 Sum_probs=106.0
Q ss_pred eeeecCceeEEEEEECCceEEEEEeCCCCCCC--------hHHHHHHHHHHHhCCCCcE--EEEeceecCCCceEEeecC
Q 005343 401 KIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG--------PRQFKQEVEILGSMRHTNM--VILLGACPEYGCLVYEYME 470 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~--------~~~~~~Ei~il~~l~HpnI--v~l~g~~~~~~~lV~Ey~~ 470 (701)
.||+|+||.||+|.+.+..|++|+........ ...+.+|++++..+.|+++ ..+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 48999999999999999999999876543211 2457789999999988764 3455555666799999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
|++|.+.+..... .++.+++.+|.+||+.+ ++|||++|.||+++ ++.++++|||+++..
T Consensus 81 g~~l~~~~~~~~~----------~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 81 GKPLKDVIEEGND----------ELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred CccHHHHHhhcHH----------HHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 9999987733210 68999999999999999 99999999999999 889999999998753
No 434
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=2.5e-17 Score=165.49 Aligned_cols=132 Identities=23% Similarity=0.304 Sum_probs=109.7
Q ss_pred eeeeecCceeEEEEEECCceEEEEEeCCCCCCC--------hHHHHHHHHHHHhCCCCcEEEEece--ecCCCceEEeec
Q 005343 400 RKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG--------PRQFKQEVEILGSMRHTNMVILLGA--CPEYGCLVYEYM 469 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~--------~~~~~~Ei~il~~l~HpnIv~l~g~--~~~~~~lV~Ey~ 469 (701)
+.||+|++|.||+|.+.+..|++|+........ ...+.+|+.++..+.|+++.....+ ..+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 579999999999999988999999876543221 1347889999999999887654433 456678999999
Q ss_pred CCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 470 ENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 470 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
+|++|.+.+... .+ .+..++.+++.+|.+||+.+ ++|||++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~------~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN------GM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc------cH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999988432 12 77889999999999999999 99999999999999 78899999999875
No 435
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.71 E-value=1.8e-17 Score=182.25 Aligned_cols=202 Identities=23% Similarity=0.418 Sum_probs=150.1
Q ss_pred HHhCCCCcEEEEeceecC--CCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCe-eecCC
Q 005343 443 LGSMRHTNMVILLGACPE--YGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPL-VHRDL 519 (701)
Q Consensus 443 l~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~i-iHrDL 519 (701)
|+.+.|.|+.+++|.+-+ ..+.|.+||..|+|.|.+.. ....++|.-...++.+|+.||.|||+.. | .|+.|
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~--~~~~~d~~F~~s~~rdi~~Gl~ylh~s~---i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN--EDIKLDYFFILSFIRDISKGLAYLHNSP---IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc--cccCccHHHHHHHHHHHHHHHHHHhcCc---ceeeeee
Confidence 457899999999999854 34789999999999999965 3356889999999999999999999865 5 99999
Q ss_pred CCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCC-------CCchhhHHHHHHHHHHH
Q 005343 520 KPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGM-------LGVKSDLYSLGVVLLQL 592 (701)
Q Consensus 520 Kp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-------~~~~sDvwSlGvil~el 592 (701)
++.|+++|....+||+|||+........ .........-..-|.|||.+.... .+.+.||||||++++|+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~----~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETA----EPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccc----cccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 9999999999999999999987763200 000111222445699999876642 46679999999999999
Q ss_pred HhCCCCCCCchH------HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhh
Q 005343 593 ITARPAMGLSHQ------VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVV 655 (701)
Q Consensus 593 ltG~~pf~~~~~------~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl 655 (701)
++.+.||+.... +-..+..+ ....+-|.+.... +....+..++..||..+|..||++.+|-
T Consensus 152 ~~r~~~~~~~~~~~~~~eii~~~~~~-~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~ 218 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDPDEIILRVKKG-GSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIR 218 (484)
T ss_pred HhccCccccccccCChHHHHHHHHhc-CCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHH
Confidence 999999975332 11122220 1111222221111 3333689999999999999999999885
No 436
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=3.7e-17 Score=167.56 Aligned_cols=141 Identities=20% Similarity=0.196 Sum_probs=109.1
Q ss_pred CceeeeeeeecCceeEEEEE-E--CCceEEEEEeCCCCCC-------------------C-----hHHHHHHHHHHHhCC
Q 005343 395 YFSISRKIGEGGYGPVYKAQ-L--DHTSVAIKVLGPDISQ-------------------G-----PRQFKQEVEILGSMR 447 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~-~--~~~~vAiK~l~~~~~~-------------------~-----~~~~~~Ei~il~~l~ 447 (701)
.|.+.+.||+|+||.||+|. . .++.||+|++...... . ...+..|+.++.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 37788999999999999998 3 6778999998754311 0 122568999999997
Q ss_pred CCc--EEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCee
Q 005343 448 HTN--MVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANIL 525 (701)
Q Consensus 448 Hpn--Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NIL 525 (701)
+.+ +..+++. ...++||||+.|++|...+.. ...+.......++.|++.+|.+||+.+ .|+||||||+||+
T Consensus 109 ~~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRLK---DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe--cCceEEEEEecCCcccccccc---cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCChhhEE
Confidence 533 3344443 345899999999888665422 224555666789999999999999987 3999999999999
Q ss_pred EcCCCcEEEEeecccccc
Q 005343 526 LDQNYVSKISDVGLARLV 543 (701)
Q Consensus 526 l~~~~~~KL~DFGla~~~ 543 (701)
++ ++.++|+|||++...
T Consensus 182 i~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 182 VH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EE-CCCEEEEEChhhhcc
Confidence 99 889999999998754
No 437
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=2.9e-17 Score=188.24 Aligned_cols=136 Identities=21% Similarity=0.250 Sum_probs=110.6
Q ss_pred hcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCC--------ChHHHHHHHHHHHhCCCCcEEEEecee--cCCC
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQ--------GPRQFKQEVEILGSMRHTNMVILLGAC--PEYG 462 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~--------~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~ 462 (701)
...|...++||+|+||.||+|.+.+..+++|+....... ....+.+|++++..++|++++....++ .+..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 345667899999999999999997777766654322111 124578999999999999987655544 4467
Q ss_pred ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 463 CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 463 ~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
++||||++|++|.+++. ....++.+++.+|.|||+.+ |+||||||+|||+ .++.++|+|||+++.
T Consensus 412 ~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 89999999999998873 34678999999999999999 9999999999999 577899999999975
Q ss_pred c
Q 005343 543 V 543 (701)
Q Consensus 543 ~ 543 (701)
.
T Consensus 477 ~ 477 (535)
T PRK09605 477 S 477 (535)
T ss_pred C
Confidence 4
No 438
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.69 E-value=1.3e-16 Score=165.93 Aligned_cols=192 Identities=19% Similarity=0.229 Sum_probs=134.5
Q ss_pred CCCcEEEEeceecCC-----------------------------CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHH
Q 005343 447 RHTNMVILLGACPEY-----------------------------GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAA 497 (701)
Q Consensus 447 ~HpnIv~l~g~~~~~-----------------------------~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 497 (701)
+|||||.+.++|-+. .|+||.-.+ -+|..++... ..+.....-|+.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~----~~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR----HRSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC----CCchHHHHHHHH
Confidence 599999998876211 157777663 4788887433 355667778999
Q ss_pred HHHHHHHHHhhcCCCCeeecCCCCCCeeE--cCCC--cEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC
Q 005343 498 EIATALLFLHQNKPEPLVHRDLKPANILL--DQNY--VSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT 573 (701)
Q Consensus 498 qia~aL~~LH~~~~~~iiHrDLKp~NILl--~~~~--~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 573 (701)
|+++|+.|||++| |.|||+|++|||+ |+++ .+.|+|||+|---....-........-..-|.-..||||++..
T Consensus 349 QlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999999 9999999999999 4444 4579999987421111111111122344567888999998765
Q ss_pred CC------CCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCC
Q 005343 574 GM------LGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRD 647 (701)
Q Consensus 574 ~~------~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~ 647 (701)
.+ --.++|.|+.|.+.||+++...||...-+. .+...++++ ..++..|..++..+.+++...|+.+|.+
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem--~L~~r~Yqe---~qLPalp~~vpp~~rqlV~~lL~r~psk 500 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM--LLDTRTYQE---SQLPALPSRVPPVARQLVFDLLKRDPSK 500 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh--eechhhhhh---hhCCCCcccCChHHHHHHHHHhcCCccc
Confidence 43 124899999999999999999999653221 111112222 2234455666777899999999999999
Q ss_pred CCCh
Q 005343 648 RPDL 651 (701)
Q Consensus 648 RPt~ 651 (701)
||+.
T Consensus 501 Rvsp 504 (598)
T KOG4158|consen 501 RVSP 504 (598)
T ss_pred cCCc
Confidence 9984
No 439
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.68 E-value=1.7e-16 Score=158.24 Aligned_cols=135 Identities=21% Similarity=0.174 Sum_probs=107.0
Q ss_pred CceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCCC----------------------ChHHHHHHHHHHHhCCCCc-
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQ----------------------GPRQFKQEVEILGSMRHTN- 450 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~----------------------~~~~~~~Ei~il~~l~Hpn- 450 (701)
.|.+.+.||+|+||.||++.. .++.||||++...... ....+..|+.++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 478889999999999999988 5778999987654310 0113678899999998874
Q ss_pred -EEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC
Q 005343 451 -MVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN 529 (701)
Q Consensus 451 -Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~ 529 (701)
+...++. ...++||||++|++|...... .....++.+++.++.++|+.+ |+||||||+||+++.+
T Consensus 96 ~v~~~~~~--~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh~~g---i~H~Dl~p~Nill~~~ 161 (198)
T cd05144 96 PVPKPIDW--NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAYKHG---IIHGDLSEFNILVDDD 161 (198)
T ss_pred CCCceeec--CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHHHCC---CCcCCCCcccEEEcCC
Confidence 4444443 345899999999998765421 234568899999999999998 9999999999999999
Q ss_pred CcEEEEeecccccc
Q 005343 530 YVSKISDVGLARLV 543 (701)
Q Consensus 530 ~~~KL~DFGla~~~ 543 (701)
+.++|+|||++...
T Consensus 162 ~~~~liDfg~~~~~ 175 (198)
T cd05144 162 EKIYIIDWPQMVST 175 (198)
T ss_pred CcEEEEECCccccC
Confidence 99999999998654
No 440
>PRK11175 universal stress protein UspE; Provisional
Probab=99.67 E-value=2.7e-16 Score=167.40 Aligned_cols=132 Identities=15% Similarity=0.054 Sum_probs=108.7
Q ss_pred CCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCC-C-CCCC---------hHHHHHHHHHHHHHHhhcC
Q 005343 21 NAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPR-G-RPAT---------NDELQKLFLPYRGLFARKR 89 (701)
Q Consensus 21 ~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~-~-~~~~---------~~~~~~~l~~~~~~~~~~~ 89 (701)
.++||||+|+|+.|..|++||+.++...++.|+++||+++..... + .... .+..++.++.+...+...|
T Consensus 3 ~~~ILv~~D~s~~~~~al~~a~~lA~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 82 (305)
T PRK11175 3 YQNILVVIDPNQDDQPALRRAVYLAQRNGGKITAFLPIYDFSYEMTTLLSPDEREAMRQGVISQRTAWIREQAKPYLDAG 82 (305)
T ss_pred cceEEEEcCCCccccHHHHHHHHHHHhcCCCEEEEEeccCchhhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 478999999999999999999999999999999999986532110 1 0000 0223445666666667778
Q ss_pred CeeeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 90 ILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 90 v~~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
++++..+...|++.++|+++|+++++|+||||++|.+++.+.++ ||++.++++++| |||++|.
T Consensus 83 ~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~~~~~~~~~~-gs~~~~l~~~~~--~pvlvv~ 145 (305)
T PRK11175 83 IPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQHDKLESVIF-TPTDWHLLRKCP--CPVLMVK 145 (305)
T ss_pred CceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCCCcHHHhhcc-ChhHHHHHhcCC--CCEEEec
Confidence 99998887668999999999999999999999999999999767 999999999998 9999998
No 441
>PRK11175 universal stress protein UspE; Provisional
Probab=99.63 E-value=1.4e-15 Score=161.98 Aligned_cols=133 Identities=13% Similarity=0.131 Sum_probs=101.4
Q ss_pred CCCEEEEEeCCCcch-------HHHHHHHHHhccCC-CCeEEEEEEecCCCCCC--CCC--CCh---HHH-HHHHHHHHH
Q 005343 20 ANAITAVAIDADKSS-------QYAVKWAVDNLLNE-TSQYVLLHVRNHSSNPR--GRP--ATN---DEL-QKLFLPYRG 83 (701)
Q Consensus 20 ~~~~IlVavD~s~~S-------~~Al~wA~~~~~~~-g~~v~llHV~~~~~~~~--~~~--~~~---~~~-~~~l~~~~~ 83 (701)
..++||||+|+|+.+ ..||++|+.++... ++.|++|||.+...... ..+ ... +.. ++..+.+..
T Consensus 151 ~~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (305)
T PRK11175 151 EGGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTPINIAIELPEFDPSVYNDAIRGQHLLAMKA 230 (305)
T ss_pred CCCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcchhccccccccchhhHHHHHHHHHHHHHHH
Confidence 358999999999653 68999999999887 99999999987532111 000 011 111 123334455
Q ss_pred HHhhcCCeeeEEEEEcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 84 LFARKRILAREVVLQDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 84 ~~~~~~v~~~~~v~~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
++...++..+..++..|+|.++|+++|++.++|+||||++|++++.+.|+ ||++++|++++| |||++|.
T Consensus 231 ~~~~~~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~~~~~~~~ll-GS~a~~v~~~~~--~pVLvv~ 299 (305)
T PRK11175 231 LRQKFGIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVGRTGLSAAFL-GNTAEHVIDHLN--CDLLAIK 299 (305)
T ss_pred HHHHhCCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCccCCCcceee-cchHHHHHhcCC--CCEEEEc
Confidence 55666777654444448999999999999999999999999999999766 999999999999 9999996
No 442
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=1.5e-15 Score=149.48 Aligned_cols=135 Identities=21% Similarity=0.208 Sum_probs=96.1
Q ss_pred eeeeeecCceeEEEEEEC-CceEEEEEeCCCCCCCh--HH----------------------HHHHHHHHHhCCCCc--E
Q 005343 399 SRKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGP--RQ----------------------FKQEVEILGSMRHTN--M 451 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~--~~----------------------~~~Ei~il~~l~Hpn--I 451 (701)
.+.||+|+||.||+|.+. +..||||++........ .. ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999985 77899999876432111 11 134566666654432 2
Q ss_pred EEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCCCCeeecCCCCCCeeEcCCC
Q 005343 452 VILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKPEPLVHRDLKPANILLDQNY 530 (701)
Q Consensus 452 v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~~~iiHrDLKp~NILl~~~~ 530 (701)
...++. ...++||||++++.+......... .. .....++.+++.++.+||. .+ |+||||||+||+++ ++
T Consensus 82 ~~~~~~--~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili~-~~ 151 (187)
T cd05119 82 PKPIDL--NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILVD-DG 151 (187)
T ss_pred CceEec--CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEEE-CC
Confidence 333332 345899999998554322111110 11 4567899999999999999 88 99999999999999 89
Q ss_pred cEEEEeecccccc
Q 005343 531 VSKISDVGLARLV 543 (701)
Q Consensus 531 ~~KL~DFGla~~~ 543 (701)
.++|+|||++...
T Consensus 152 ~~~liDfg~a~~~ 164 (187)
T cd05119 152 KVYIIDVPQAVEI 164 (187)
T ss_pred cEEEEECcccccc
Confidence 9999999999754
No 443
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.61 E-value=4.5e-15 Score=139.07 Aligned_cols=134 Identities=24% Similarity=0.256 Sum_probs=111.6
Q ss_pred eeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCC--CcEEEEeceecC--CCceEEeecCCCC
Q 005343 398 ISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRH--TNMVILLGACPE--YGCLVYEYMENGS 473 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~H--pnIv~l~g~~~~--~~~lV~Ey~~~gs 473 (701)
+.+.||.|.++.||++...+..+++|....... ...+.+|+.++..+.| +++..+++++.. ..+++|||+.++.
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~ 79 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGET 79 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCee
Confidence 457899999999999999888899999866543 5678999999999976 478888877644 5689999998877
Q ss_pred hhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 474 LEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 474 L~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+..+ +......++.+++.+|.+||.....+++|+||+|.||+++.++.+++.|||++...
T Consensus 80 ~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~ 139 (155)
T cd05120 80 LDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG 139 (155)
T ss_pred cccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence 7543 44566778999999999999864334999999999999999999999999998754
No 444
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=99.60 E-value=4.6e-15 Score=135.58 Aligned_cols=128 Identities=25% Similarity=0.360 Sum_probs=108.9
Q ss_pred EEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCC--CCCChHHHHHHHHHHHHHHhhcCCeeeEEEEEcC
Q 005343 23 ITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRG--RPATNDELQKLFLPYRGLFARKRILAREVVLQDI 100 (701)
Q Consensus 23 ~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~~~~ 100 (701)
+||||+|++..+..+++||..++...++.|+++||.++...... ......+.++.++.+...|...|+.+...+.. |
T Consensus 1 ~ilv~i~~~~~~~~~l~~a~~~a~~~~~~i~~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~ 79 (130)
T cd00293 1 RILVAVDGSEESERALRWAARLARRLGAELVLLHVVDPPPSSAAELAELLEEEARALLEALREALAEAGVKVETVVLE-G 79 (130)
T ss_pred CEEEEeCCCHHHHHHHHHHHHHHHhcCCEEEEEEEecCCCCcchhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEec-C
Confidence 58999999999999999999999999999999999876321110 01123566788888888888889999888887 6
Q ss_pred ChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEE
Q 005343 101 DVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYII 154 (701)
Q Consensus 101 ~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV 154 (701)
++.++|++++++.++|+||||+++++.+.+.++ ||++.+++++++ |||++|
T Consensus 80 ~~~~~i~~~~~~~~~dlvvig~~~~~~~~~~~~-~~~~~~ll~~~~--~pvliv 130 (130)
T cd00293 80 DPAEAILEAAEELGADLIVMGSRGRSGLRRLLL-GSVAERVLRHAP--CPVLVV 130 (130)
T ss_pred CCHHHHHHHHHHcCCCEEEEcCCCCCccceeee-ccHHHHHHhCCC--CCEEeC
Confidence 779999999999999999999999999888666 999999999987 999985
No 445
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=99.57 E-value=3.4e-14 Score=134.40 Aligned_cols=132 Identities=19% Similarity=0.239 Sum_probs=110.6
Q ss_pred CCCEEEEEeC-CCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCC-CC----CC--------ChHHHHHHHHHHHHHH
Q 005343 20 ANAITAVAID-ADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPR-GR----PA--------TNDELQKLFLPYRGLF 85 (701)
Q Consensus 20 ~~~~IlVavD-~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~-~~----~~--------~~~~~~~~l~~~~~~~ 85 (701)
..++|++++| +++.+..|+.+|+..+...+..+.++||.+...... .. .. ......+.++.+....
T Consensus 4 ~~~~il~~~d~~s~~~~~a~~~a~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (154)
T COG0589 4 MYKKILVAVDVGSEAAEKALEEAVALAKRLGAPLILLVVIDPLEPTALVSVALADAPIPLSEEELEEEAEELLAEAKALA 83 (154)
T ss_pred ccceEEEEeCCCCHHHHHHHHHHHHHHHhcCCeEEEEEEecccccccccccccccchhhhhHHHHHHHHHHHHHHHHHHH
Confidence 4589999999 999999999999999999999999999997742111 00 01 1245577888888888
Q ss_pred hhcCCee-eEEEEEcCCh-hHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 86 ARKRILA-REVVLQDIDV-SSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 86 ~~~~v~~-~~~v~~~~~~-~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
...++.. +..+.. |+| .+.|+++|.++++|+||||++|++++.+ +++|||+++|+++++ |||++|.
T Consensus 84 ~~~~~~~~~~~~~~-g~~~~~~i~~~a~~~~adliV~G~~g~~~l~~-~llGsvs~~v~~~~~--~pVlvv~ 151 (154)
T COG0589 84 EAAGVPVVETEVVE-GSPSAEEILELAEEEDADLIVVGSRGRSGLSR-LLLGSVAEKVLRHAP--CPVLVVR 151 (154)
T ss_pred HHcCCCeeEEEEec-CCCcHHHHHHHHHHhCCCEEEECCCCCccccc-eeeehhHHHHHhcCC--CCEEEEc
Confidence 8889885 777777 666 7999999999999999999999999999 445999999999998 9999996
No 446
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.54 E-value=4e-14 Score=145.44 Aligned_cols=132 Identities=19% Similarity=0.193 Sum_probs=103.2
Q ss_pred eeee-ecCceeEEEEEECCceEEEEEeCCCC-------------CCChHHHHHHHHHHHhCCCCcE--EEEeceecC---
Q 005343 400 RKIG-EGGYGPVYKAQLDHTSVAIKVLGPDI-------------SQGPRQFKQEVEILGSMRHTNM--VILLGACPE--- 460 (701)
Q Consensus 400 ~~IG-~G~fg~Vyk~~~~~~~vAiK~l~~~~-------------~~~~~~~~~Ei~il~~l~HpnI--v~l~g~~~~--- 460 (701)
..|| .||.|+||.+...+..++||.+.... ......+.+|++++..|.|+++ ...++++..
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 4688 89999999999988899999774321 0123457889999999998775 555555321
Q ss_pred ---CCceEEeecCC-CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEe
Q 005343 461 ---YGCLVYEYMEN-GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISD 536 (701)
Q Consensus 461 ---~~~lV~Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~D 536 (701)
..++||||++| .+|.+++.. .+++.. .+.+|+.+|.+||+.| |+||||||.|||++.++.++|+|
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~~----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQE----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHhc----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEEEE
Confidence 12599999997 689887733 234443 3678999999999999 99999999999999999999999
Q ss_pred eccccc
Q 005343 537 VGLARL 542 (701)
Q Consensus 537 FGla~~ 542 (701)
||.+..
T Consensus 186 fg~~~~ 191 (239)
T PRK01723 186 FDRGEL 191 (239)
T ss_pred CCCccc
Confidence 998865
No 447
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=5.4e-16 Score=178.02 Aligned_cols=256 Identities=23% Similarity=0.343 Sum_probs=190.0
Q ss_pred hcCceeeeeeeecCceeEEEEEE-CCce--EEEEEeCCCC--CCChHHHHHHHHHHHhCC-CCcEEEEecee--cCCCce
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQL-DHTS--VAIKVLGPDI--SQGPRQFKQEVEILGSMR-HTNMVILLGAC--PEYGCL 464 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~-~~~~--vAiK~l~~~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~--~~~~~l 464 (701)
...|.+.+.||+|+|+.|-.... .+.. +|+|.+.... .........|..+-..+. |+|++.+++.. ++..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 45688888899999999988876 2333 5556554432 222344566888888887 99999999987 445689
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHh-hcCCCCeeecCCCCCCeeEcCCC-cEEEEeeccccc
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLH-QNKPEPLVHRDLKPANILLDQNY-VSKISDVGLARL 542 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH-~~~~~~iiHrDLKp~NILl~~~~-~~KL~DFGla~~ 542 (701)
+++|..||++.+.+... .....+....-.++.|+..+|.|+| ..+ +.||||||+|.+++.++ .+|++|||+|..
T Consensus 99 ~~~~s~g~~~f~~i~~~-~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHP-DSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccCcccccccccccccC-CccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999998877321 1113344455578999999999999 888 99999999999999999 999999999988
Q ss_pred cCC-CCCccccccccccccc-CCCccCcccccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccC
Q 005343 543 VPP-SAADTITQYHMTTAAG-TFCYIDPEYQQT-GMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLD 619 (701)
Q Consensus 543 ~~~-~~~~~~~~~~~~~~~g-t~~Y~aPE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld 619 (701)
+.. .. ........+| ++.|+|||.+.+ ...++..|+||.|+++.-+++|..|+....... +.+.....
T Consensus 175 ~~~~~g----~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-----~~~~~~~~ 245 (601)
T KOG0590|consen 175 YRNKNG----AERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-----GRYSSWKS 245 (601)
T ss_pred ccccCC----cceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-----ccceeecc
Confidence 755 22 2223455677 999999998877 456889999999999999999998886554322 12111111
Q ss_pred cc----CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 620 PT----VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 620 ~~----~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
.. ...| ........+++..++..+|..|.+..++-.+.|...
T Consensus 246 ~~~~~~~~~~-~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 246 NKGRFTQLPW-NSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred cccccccCcc-ccCChhhhhcccccccCCchhccccccccccccccc
Confidence 11 1122 122334678889999999999999999999999887
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.42 E-value=1.1e-13 Score=141.36 Aligned_cols=207 Identities=23% Similarity=0.310 Sum_probs=146.4
Q ss_pred HHHHHHHhCCCCcEEEEeceecCCC-------ceEEeecCCCChhhHhccc-CCCCCCChHHHHHHHHHHHHHHHHHhhc
Q 005343 438 QEVEILGSMRHTNMVILLGACPEYG-------CLVYEYMENGSLEDRLFQK-DNSPPIHWSIRFKIAAEIATALLFLHQN 509 (701)
Q Consensus 438 ~Ei~il~~l~HpnIv~l~g~~~~~~-------~lV~Ey~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~qia~aL~~LH~~ 509 (701)
.-..-|-.+.|-|||++..|+.+.. .++.|||..|+|..+|.+. .....+......+++-||+.||.|||+.
T Consensus 116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~ 195 (458)
T KOG1266|consen 116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC 195 (458)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence 3344556678999999988885433 5899999999999999764 3344577777789999999999999998
Q ss_pred CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHH
Q 005343 510 KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVL 589 (701)
Q Consensus 510 ~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil 589 (701)
. .||+|+++..+-|++..+|.+||+--.-.. +.++.. ........-..+-++|.+||+-.....+..+|||+||+..
T Consensus 196 ~-PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~-~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcA 272 (458)
T KOG1266|consen 196 D-PPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVN-STREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCA 272 (458)
T ss_pred C-CccccCCcchhheeecCCceEEecccCccc-cchhhh-hhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHH
Confidence 7 579999999999999999999986322111 111110 0011112233467889999998888888899999999999
Q ss_pred HHHHhCCC-CCCCchH--HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHH
Q 005343 590 LQLITARP-AMGLSHQ--VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPEL 659 (701)
Q Consensus 590 ~elltG~~-pf~~~~~--~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~ 659 (701)
++|..|.. |-..... ++..+..-.+ .+- ++ . =..++..|++-.|..||+++.++-|++
T Consensus 273 lemailEiq~tnseS~~~~ee~ia~~i~-~le----n~--l-----qr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 273 LEMAILEIQSTNSESKVEVEENIANVII-GLE----NG--L-----QRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHHHHheeccCCCcceeehhhhhhhhee-ecc----Cc--c-----ccCcCcccccCCCCCCcchhhhhcCce
Confidence 99998873 3333332 2222222111 010 11 1 247889999999999999999997754
No 449
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.40 E-value=1.7e-12 Score=144.68 Aligned_cols=138 Identities=20% Similarity=0.269 Sum_probs=98.2
Q ss_pred eeeeecCceeEEEEEE-CCceEEEEEeCCCCCCChH----------------------------------------HHHH
Q 005343 400 RKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQGPR----------------------------------------QFKQ 438 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~~~----------------------------------------~~~~ 438 (701)
+.||.|++|.||+|++ +++.||||+.++....... .|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 6799999999999998 6888999998775311100 1344
Q ss_pred HHHHHHhCC-----CCcEE--EEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHH-HHHHHhhcC
Q 005343 439 EVEILGSMR-----HTNMV--ILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIAT-ALLFLHQNK 510 (701)
Q Consensus 439 Ei~il~~l~-----HpnIv--~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~-aL~~LH~~~ 510 (701)
|...+.+++ ++++. .++..+....+|||||++|++|.+.+..... .+ .+..++..++. .+..+|..|
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~--~~---~~~~ia~~~~~~~l~ql~~~g 277 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA--GL---DRKALAENLARSFLNQVLRDG 277 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhc--CC---CHHHHHHHHHHHHHHHHHhCC
Confidence 555555542 33332 2232223456899999999999887643211 11 23456777766 477899988
Q ss_pred CCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 511 PEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 511 ~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
++|+|++|.||+++.++.++|+|||++..+++
T Consensus 278 ---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 278 ---FFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred ---ceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 99999999999999999999999999987643
No 450
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=99.39 E-value=2e-12 Score=138.71 Aligned_cols=104 Identities=13% Similarity=0.133 Sum_probs=84.8
Q ss_pred CCCEEEEEeCCCcchHHHHHHHHHhccCC--CCeEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHhh------cCCe
Q 005343 20 ANAITAVAIDADKSSQYAVKWAVDNLLNE--TSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFAR------KRIL 91 (701)
Q Consensus 20 ~~~~IlVavD~s~~S~~Al~wA~~~~~~~--g~~v~llHV~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~~v~ 91 (701)
..+|||||||||+.|++|+++|++++... +++|++|||.+...............+++++.++..+.. .||+
T Consensus 4 ~ykkILVavDGSe~S~~Al~~AielA~~~g~~AeL~lL~Vv~~~~~~~~~~~~~~~~eelle~~~~~~~~~l~~~~~gV~ 83 (357)
T PRK12652 4 AANRLLVPVADSVTVRQTVAYAVESAEEAAETPTVHLVAAASGRAVDPEGQDELAAAEELLERVEVWATEDLGDDASSVT 83 (357)
T ss_pred ccCeEEEEeCCCHHHHHHHHHHHHHHHhcCCCCEEEEEEEecCcccccchhHHHHHHHHHHHHHHHHHHHhhhcccCCCc
Confidence 45899999999999999999999999874 599999999986422111112225566778888877765 5999
Q ss_pred eeEEEEEc-------CChhHHHHHHHHHcCCCEEEEccC
Q 005343 92 AREVVLQD-------IDVSSALIYYVKNNSVGNIVAGGS 123 (701)
Q Consensus 92 ~~~~v~~~-------~~~~~~Iv~~a~~~~~d~IV~Gs~ 123 (701)
+++.++.+ |+|+++|++||+++++|+||||-.
T Consensus 84 ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~ 122 (357)
T PRK12652 84 IETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPE 122 (357)
T ss_pred eEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCC
Confidence 99988874 799999999999999999999965
No 451
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.38 E-value=1.7e-12 Score=125.37 Aligned_cols=131 Identities=21% Similarity=0.197 Sum_probs=100.6
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEE-EEeceecCCCceEEeecCCCChhhH
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMV-ILLGACPEYGCLVYEYMENGSLEDR 477 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv-~l~g~~~~~~~lV~Ey~~~gsL~~~ 477 (701)
.+.|+.|.++.||++...+..|++|+...... ....+..|+.++..+.+.+++ .+++...+..++||||++|.++.+.
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~ 81 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTE 81 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCccccc
Confidence 35789999999999999988999998765432 223468899999988655443 4555555567899999999887542
Q ss_pred hcccCCCCCCChHHHHHHHHHHHHHHHHHhhcC--CCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 478 LFQKDNSPPIHWSIRFKIAAEIATALLFLHQNK--PEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 478 l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~--~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
. .. ...++.+++.+|..||..+ +..++|+|++|.||+++ ++.++++|||.+..
T Consensus 82 ~--------~~---~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 82 D--------FS---DPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred c--------cc---CHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 0 11 1235779999999999987 23369999999999999 66799999998764
No 452
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.24 E-value=3.6e-12 Score=147.18 Aligned_cols=265 Identities=21% Similarity=0.227 Sum_probs=183.0
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce--EEEEEeCCCC---CCChHHHHHHHHHHHhCCCCcEEEEece--ecCCCce
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS--VAIKVLGPDI---SQGPRQFKQEVEILGSMRHTNMVILLGA--CPEYGCL 464 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~--vAiK~l~~~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~--~~~~~~l 464 (701)
..+.|.+.+-+-.|.||.++.+.-.++. .++|+..... ....+....+-.++-..++|.++...-. |....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 4577888889999999999987654333 3444433221 1122333444444444566777765544 4566689
Q ss_pred EEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccC
Q 005343 465 VYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVP 544 (701)
Q Consensus 465 V~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~ 544 (701)
|++|+.+++|...|+.-. ..+.+-.......+..+++|||... ++|||++|.|+|...+++.+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~---~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG---CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCC---CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCccccccccc
Confidence 999999999998885433 3444444556778899999999988 9999999999999999999999998543321
Q ss_pred ---CCCCc----c---------------c---ccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 005343 545 ---PSAAD----T---------------I---TQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAM 599 (701)
Q Consensus 545 ---~~~~~----~---------------~---~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf 599 (701)
+.... . . .........||+.|++||...+...+..+|+|++|+++++.++|.+||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00000 0 0 001234578999999999999999999999999999999999999999
Q ss_pred CCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChh---hhhhHHHHHHHhcc
Q 005343 600 GLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLV---SVVLPELIRLRDLG 666 (701)
Q Consensus 600 ~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~---~vl~~~~~~l~~~~ 666 (701)
...... +.+++ .. ..+..+..-|........+++...+..+|..|-.+. ++=-|.|++--++.
T Consensus 1036 na~tpq-~~f~n-i~--~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1036 NAETPQ-QIFEN-IL--NRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred CCcchh-hhhhc-cc--cCCCCCCCCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence 755432 22211 10 011222233445566789999999999999999887 66667777655544
No 453
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.22 E-value=6.8e-12 Score=138.61 Aligned_cols=253 Identities=23% Similarity=0.252 Sum_probs=175.6
Q ss_pred Cceeeeeeee--cCceeEEEEEE--C--CceEEEEEeCCCCC--CChHHHHHHHHHHHhC-CCCcEEEEeceecCCC--c
Q 005343 395 YFSISRKIGE--GGYGPVYKAQL--D--HTSVAIKVLGPDIS--QGPRQFKQEVEILGSM-RHTNMVILLGACPEYG--C 463 (701)
Q Consensus 395 ~f~~~~~IG~--G~fg~Vyk~~~--~--~~~vAiK~l~~~~~--~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~~~--~ 463 (701)
.|-+...+|. |.+|.||.+.. . ...+|+|.-+.... .....=.+|+...+++ .|+|.+..+..+.+.. +
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3666788999 99999999987 3 34488886433332 2223335677777777 4999999888875543 6
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHH----HHHHHhhcCCCCeeecCCCCCCeeEcCC-CcEEEEeec
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIAT----ALLFLHQNKPEPLVHRDLKPANILLDQN-YVSKISDVG 538 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~----aL~~LH~~~~~~iiHrDLKp~NILl~~~-~~~KL~DFG 538 (701)
+-+|++ +.+|..+..... ..++....+.+..+... ||.++|+.+ ++|-|+||.||++..+ ...+++|||
T Consensus 195 iqtE~~-~~sl~~~~~~~~--~~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPC--NFLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred eeeccc-cchhHHhhhccc--ccCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCcc
Confidence 667777 577877664432 33566667777888888 999999999 9999999999999998 889999999
Q ss_pred cccccCCCCCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCC-CCchHHHHHHHcCccccc
Q 005343 539 LARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAM-GLSHQVEQAIRNGTFSEL 617 (701)
Q Consensus 539 la~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf-~~~~~~~~~i~~~~~~~~ 617 (701)
+...+............ ....|...|++||.. .+.++...|+|++|.++.+-.+|-.++ .+.+.....++.+.+.
T Consensus 269 ~v~~i~~~~~~~~~~~~-~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip-- 344 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVS-KRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIP-- 344 (524)
T ss_pred eeEEccCCccccceeee-ecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCc--
Confidence 99888655422222211 333577789999954 557788999999999999998887443 2211111111111110
Q ss_pred cCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 618 LDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 618 ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
+ .+-......+...+.+|++.+|..|++.+.+..+.+...
T Consensus 345 -~----e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s 384 (524)
T KOG0601|consen 345 -L----EFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS 384 (524)
T ss_pred -h----hhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence 0 011112234666999999999999999999987766553
No 454
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.21 E-value=3.4e-11 Score=136.13 Aligned_cols=144 Identities=20% Similarity=0.266 Sum_probs=92.4
Q ss_pred hcCceeeeeeeecCceeEEEEEEC--CceEEEEEeCCCCCC--------------------------Ch--------H--
Q 005343 393 TDYFSISRKIGEGGYGPVYKAQLD--HTSVAIKVLGPDISQ--------------------------GP--------R-- 434 (701)
Q Consensus 393 ~~~f~~~~~IG~G~fg~Vyk~~~~--~~~vAiK~l~~~~~~--------------------------~~--------~-- 434 (701)
...|+. +.||.|++|.||+|++. ++.||||+.++.... .. +
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 445666 78999999999999984 678999999876311 00 1
Q ss_pred ----HHHHHHHHHHhCC----CCcEEEEecee---cCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHH-
Q 005343 435 ----QFKQEVEILGSMR----HTNMVILLGAC---PEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATA- 502 (701)
Q Consensus 435 ----~~~~Ei~il~~l~----HpnIv~l~g~~---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~a- 502 (701)
.|.+|...+.+++ +.+.+.+-..+ ....+|||||++|+.+.+...-.... ... ..++...+..
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g--~d~---~~la~~~v~~~ 272 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG--TDM---KLLAERGVEVF 272 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC--CCH---HHHHHHHHHHH
Confidence 1344554444442 33334333333 34558999999999997742111111 111 1122222222
Q ss_pred HHHHhhcCCCCeeecCCCCCCeeEcCCC----cEEEEeeccccccCC
Q 005343 503 LLFLHQNKPEPLVHRDLKPANILLDQNY----VSKISDVGLARLVPP 545 (701)
Q Consensus 503 L~~LH~~~~~~iiHrDLKp~NILl~~~~----~~KL~DFGla~~~~~ 545 (701)
+.-+...| ++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 273 ~~Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 273 FTQVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 22234567 99999999999999887 999999999987754
No 455
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=3.9e-10 Score=113.54 Aligned_cols=140 Identities=24% Similarity=0.322 Sum_probs=108.3
Q ss_pred eeeeecCceeEEEEEECC-ceEEEEEeCCCCC-CChHHHHHHHHHHHhCCCC--cEEEEeceecC-----CCceEEeecC
Q 005343 400 RKIGEGGYGPVYKAQLDH-TSVAIKVLGPDIS-QGPRQFKQEVEILGSMRHT--NMVILLGACPE-----YGCLVYEYME 470 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~-~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~Hp--nIv~l~g~~~~-----~~~lV~Ey~~ 470 (701)
+.||.|.++.||++...+ ..+++|+...... .....+.+|++++..+.+. ++.+++.++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 568999999999999876 7899998765432 1345789999999999753 34556666644 4489999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcC----------------------------------------
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNK---------------------------------------- 510 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~---------------------------------------- 510 (701)
|.++.+.+.. ..++...+..++.+++.+|..||+..
T Consensus 84 G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (223)
T cd05154 84 GRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER 159 (223)
T ss_pred CEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence 9888775521 34677778888999999999998531
Q ss_pred -------------CCCeeecCCCCCCeeEcC--CCcEEEEeecccccc
Q 005343 511 -------------PEPLVHRDLKPANILLDQ--NYVSKISDVGLARLV 543 (701)
Q Consensus 511 -------------~~~iiHrDLKp~NILl~~--~~~~KL~DFGla~~~ 543 (701)
+..++|+|+.|.||+++. ++.+.|+||+.+..-
T Consensus 160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~g 207 (223)
T cd05154 160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATLG 207 (223)
T ss_pred HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccccC
Confidence 234799999999999998 677899999988653
No 456
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.12 E-value=5.2e-10 Score=110.66 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=95.8
Q ss_pred eeeeeecCceeEEEEEEC--------CceEEEEEeCCCCC---------------------CC-hHHH----HHHHHHHH
Q 005343 399 SRKIGEGGYGPVYKAQLD--------HTSVAIKVLGPDIS---------------------QG-PRQF----KQEVEILG 444 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~--------~~~vAiK~l~~~~~---------------------~~-~~~~----~~Ei~il~ 444 (701)
...||.|.=+.||.|... +..+|||+.+.... .+ ...+ .+|+..|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357999999999999764 26799998754210 11 1123 37999998
Q ss_pred hCCC--CcEEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHH-hhcCCCCeeecCCCC
Q 005343 445 SMRH--TNMVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFL-HQNKPEPLVHRDLKP 521 (701)
Q Consensus 445 ~l~H--pnIv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~L-H~~~~~~iiHrDLKp 521 (701)
++.. -++-..+++ ...+|||||+.++.+..-..+ ...++......+..+++.+|..| |..+ |||+||++
T Consensus 82 rl~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lk---d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGDLs~ 153 (197)
T cd05146 82 RMQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLK---DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHADLSE 153 (197)
T ss_pred HHHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhh---ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCCCCH
Confidence 8843 233344433 567899999976544221111 11244455667889999999998 8889 99999999
Q ss_pred CCeeEcCCCcEEEEeecccccc
Q 005343 522 ANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 522 ~NILl~~~~~~KL~DFGla~~~ 543 (701)
.|||++. +.+.|+|||.+...
T Consensus 154 ~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 154 YNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred HHEEEEC-CcEEEEECCCceeC
Confidence 9999974 67899999988654
No 457
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.09 E-value=9.7e-11 Score=129.60 Aligned_cols=243 Identities=26% Similarity=0.289 Sum_probs=169.2
Q ss_pred hhcCceeeeeeeecCceeEEEEEEC---CceEEEEEeCCCCCCChHH--HHHHHHHHHhC-CCCcEEEEecee--cCCCc
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLD---HTSVAIKVLGPDISQGPRQ--FKQEVEILGSM-RHTNMVILLGAC--PEYGC 463 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~---~~~vAiK~l~~~~~~~~~~--~~~Ei~il~~l-~HpnIv~l~g~~--~~~~~ 463 (701)
.+.+|..+..||.|.|+.|+....+ +..|++|-+.........+ -..|+-+...+ -|.+++.++..| .++.+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 4567999999999999999998753 4458888766554333222 24455555554 477777766555 34557
Q ss_pred eEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC-CcEEEEeeccccc
Q 005343 464 LVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN-YVSKISDVGLARL 542 (701)
Q Consensus 464 lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~-~~~KL~DFGla~~ 542 (701)
+=.||++++++...+. -..-+....++++..|++.++.++|+.. ++|+|+||+||++.++ +..+++|||....
T Consensus 343 ip~e~~~~~s~~l~~~---~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSV---TSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred CchhhhcCcchhhhhH---HHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhccccccccc
Confidence 8889999999877662 2233566678889999999999999999 9999999999999875 7889999998763
Q ss_pred cCCCCCcccccccccccccCCCc-cCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCcc
Q 005343 543 VPPSAADTITQYHMTTAAGTFCY-IDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPT 621 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y-~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~ 621 (701)
+... .....-++..| .+|.......+..+.|+||||.-+.+.++|.+.-...... ..+..|.. +.
T Consensus 417 ~~~~--------~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~-~~i~~~~~-----p~ 482 (524)
T KOG0601|consen 417 LAFS--------SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS-LTIRSGDT-----PN 482 (524)
T ss_pred ccee--------cccccccccccccchhhccccccccccccccccccccccccCcccCcccccc-eeeecccc-----cC
Confidence 3211 11122223334 3566666777899999999999999999998543221111 11112211 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHH
Q 005343 622 VTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPE 658 (701)
Q Consensus 622 ~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~ 658 (701)
.+..- ..+..+...+...++..||.+.+...|.
T Consensus 483 ---~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~ 515 (524)
T KOG0601|consen 483 ---LPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHS 515 (524)
T ss_pred ---CCchH-HhhhhhhhhhcCCccccchhhhhhcccc
Confidence 12222 5688999999999999999998887654
No 458
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.04 E-value=2.1e-09 Score=103.26 Aligned_cols=128 Identities=26% Similarity=0.367 Sum_probs=99.9
Q ss_pred eeeecCceeEEEEEECCceEEEEEeCCCCCCC--------hHHHHHHHHHHHhCCCC--cEEEEeceecCCCceEEeecC
Q 005343 401 KIGEGGYGPVYKAQLDHTSVAIKVLGPDISQG--------PRQFKQEVEILGSMRHT--NMVILLGACPEYGCLVYEYME 470 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~--------~~~~~~Ei~il~~l~Hp--nIv~l~g~~~~~~~lV~Ey~~ 470 (701)
.|++|+=+.+|.+.+.+.++++|.-.+..-.. ...-.+|..++.+++-- +...++++.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 57899999999999888788888643332111 12357799999887533 444567777888899999999
Q ss_pred CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 471 NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 471 ~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
|..|.+.+... +..++..+-.-+.-||..+ |||+||.++||.+..++ +.++||||+..
T Consensus 83 G~~lkd~l~~~----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 83 GELLKDALEEA----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred ChhHHHHHHhc----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99998888433 2457778888888999999 99999999999998776 89999999864
No 459
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.03 E-value=1.4e-09 Score=121.50 Aligned_cols=162 Identities=22% Similarity=0.219 Sum_probs=119.9
Q ss_pred CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceecCCC--ceEEeecCCCChhhHhcccCCCCCCChHHHH
Q 005343 416 DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACPEYG--CLVYEYMENGSLEDRLFQKDNSPPIHWSIRF 493 (701)
Q Consensus 416 ~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~--~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~ 493 (701)
.+.+|.|.+.............+-+.-|+.++||||+.++..+.... |||+|-+. .|..++.+. ......
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------~~~~v~ 107 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------GKEEVC 107 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------HHHHHH
Confidence 45568887776654433455788899999999999999999986655 89999874 566666332 244555
Q ss_pred HHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccCcccccC
Q 005343 494 KIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQT 573 (701)
Q Consensus 494 ~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 573 (701)
-.+.||+.||.|||..+. ++|++|.-+.|+++..|..||++|.++...+.... ......--..|..|+.+..
T Consensus 108 ~Gl~qIl~AL~FL~~d~~--lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~------~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 108 LGLFQILAALSFLNDDCN--LVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA------PAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHhccCC--eeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc------ccccchhhhcccChhhcCc
Confidence 678999999999985442 99999999999999999999999999875532211 0111122234677776554
Q ss_pred CCCCchhhHHHHHHHHHHHHhC
Q 005343 574 GMLGVKSDLYSLGVVLLQLITA 595 (701)
Q Consensus 574 ~~~~~~sDvwSlGvil~elltG 595 (701)
.. ...|.|-|||++++++.|
T Consensus 180 s~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCc
Confidence 44 346999999999999999
No 460
>PRK10490 sensor protein KdpD; Provisional
Probab=99.02 E-value=2.5e-09 Score=129.62 Aligned_cols=126 Identities=15% Similarity=0.188 Sum_probs=103.6
Q ss_pred CCCCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHhhcCCeeeEEEEE
Q 005343 19 TANAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFARKRILAREVVLQ 98 (701)
Q Consensus 19 ~~~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~~ 98 (701)
...++|||+|++++.+.+++++|..++.+.++.+++|||..+.. .....+..+. +.....+|.+.|.+ .+++.
T Consensus 248 ~~~eriLV~v~~~~~~~~lIr~~~rlA~~~~a~~~~l~V~~~~~----~~~~~~~~~~-l~~~~~lA~~lGa~--~~~~~ 320 (895)
T PRK10490 248 HTRDAILLCIGHNTGSEKLVRTAARLAARLGSVWHAVYVETPRL----HRLPEKKRRA-ILSALRLAQELGAE--TATLS 320 (895)
T ss_pred CcCCeEEEEECCCcchHHHHHHHHHHHHhcCCCEEEEEEecCCc----CcCCHHHHHH-HHHHHHHHHHcCCE--EEEEe
Confidence 45688999999999999999999999999999999999987521 0112233333 44444588888877 55677
Q ss_pred cCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 99 DIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 99 ~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
|+|++++|++||++++++.||||.++++++ |+.||+++++++.++ ...|+||.
T Consensus 321 ~~dva~~i~~~A~~~~vt~IViG~s~~~~~---~~~~s~~~~l~r~~~-~idi~iv~ 373 (895)
T PRK10490 321 DPAEEKAVLRYAREHNLGKIIIGRRASRRW---WRRESFADRLARLGP-DLDLVIVA 373 (895)
T ss_pred CCCHHHHHHHHHHHhCCCEEEECCCCCCCC---ccCCCHHHHHHHhCC-CCCEEEEe
Confidence 899999999999999999999999999875 444899999999998 89999998
No 461
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.95 E-value=3.6e-08 Score=107.23 Aligned_cols=211 Identities=20% Similarity=0.253 Sum_probs=147.5
Q ss_pred eeEEEEEE--CCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEEEeceec-----C-CCceEEeecCC-CChhhHh
Q 005343 408 GPVYKAQL--DHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVILLGACP-----E-YGCLVYEYMEN-GSLEDRL 478 (701)
Q Consensus 408 g~Vyk~~~--~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~-----~-~~~lV~Ey~~~-gsL~~~l 478 (701)
.+.|++.. +|..|++|.++.+..........-+++++++.|+|+|++..+|. + ..+|||+|.++ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 57899986 67779999997665555545556688999999999999988764 2 23799999986 6787766
Q ss_pred cccC------------CCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 479 FQKD------------NSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 479 ~~~~------------~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
+... .+...++..++.++.|+..||.++|+.| +--+=|.|.+||++.+..++|+..|....+..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 4321 2335778999999999999999999999 888999999999999989999988877665432
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCCch-HHHHHHHcCccccccCccCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGLSH-QVEQAIRNGTFSELLDPTVTGW 625 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~-~~~~~i~~~~~~~~ld~~~~~~ 625 (701)
.. +| +.. -.+-|.=-||.+++-|.||..--...+ .....++ ..
T Consensus 447 ~~------------------~~--le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~-------------~I 490 (655)
T KOG3741|consen 447 PT------------------EP--LES---QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLT-------------RI 490 (655)
T ss_pred CC------------------cc--hhH---HhhhhHHHHHHHHHHHhhcccccccccchHHHHHH-------------Hh
Confidence 10 11 111 124689999999999999963311111 1111011 01
Q ss_pred CHHHHHHHHHHHHHhhccCcCCCCChhhhhhHH
Q 005343 626 PVEAALSIAKLALQCCELRKRDRPDLVSVVLPE 658 (701)
Q Consensus 626 p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~ 658 (701)
-.....++.+++.-....++++ -++.+++-+-
T Consensus 491 ~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 491 TTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred hhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 1233445667777777777776 5666665443
No 462
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.88 E-value=2.1e-08 Score=96.01 Aligned_cols=141 Identities=21% Similarity=0.238 Sum_probs=101.4
Q ss_pred eeeeeeecCceeEEEEEECCceEEEEEeCCCC--------CCChHHHHHHHHHHHhCCCCcEE--EEeceecCCCceEEe
Q 005343 398 ISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDI--------SQGPRQFKQEVEILGSMRHTNMV--ILLGACPEYGCLVYE 467 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~--------~~~~~~~~~Ei~il~~l~HpnIv--~l~g~~~~~~~lV~E 467 (701)
.+..|-+|+-+.|+++.+.+..+.||.--... .-......+|+.+|.+++--.|. .++-.-....+|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 56789999999999999999998888432111 01123478899999888633332 222222445689999
Q ss_pred ecCC-CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCC---cEEEEeeccccc
Q 005343 468 YMEN-GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNY---VSKISDVGLARL 542 (701)
Q Consensus 468 y~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~---~~KL~DFGla~~ 542 (701)
|++| .++.+++........ .......++..|-+.|.-||.++ |||+||..+||+|..++ .+.++|||++..
T Consensus 91 ~~~g~~~vk~~i~~~~~~~~-~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 91 FIDGASTVKDFILSTMEDES-EDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred eccchhHHHHHHHHHccCcc-cchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchhc
Confidence 9976 477777765543332 23333678889999999999999 99999999999996443 458999999753
No 463
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.86 E-value=6.4e-08 Score=102.80 Aligned_cols=253 Identities=18% Similarity=0.222 Sum_probs=163.9
Q ss_pred eeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhC-CCCcEEE--------EeceecCC-CceEE
Q 005343 397 SISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSM-RHTNMVI--------LLGACPEY-GCLVY 466 (701)
Q Consensus 397 ~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-~HpnIv~--------l~g~~~~~-~~lV~ 466 (701)
...+.||+|+-+.+|-.--- ...+-|+.+....... .+-+..|... .||-+-. |+|.-... ..+.|
T Consensus 14 ~~gr~LgqGgea~ly~l~e~-~d~VAKIYh~Pppa~~---aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEV-RDQVAKIYHAPPPAAQ---AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCCccccCCccceeeecchh-hchhheeecCCCchHH---HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 34678999999999954221 2234566665432222 2223333333 5553322 22222111 24667
Q ss_pred eecCCCChhhHh----cccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 467 EYMENGSLEDRL----FQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 467 Ey~~~gsL~~~l----~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
..+.+.---..+ .++...+...|.-.++.+..++.+.+.||..| .+-+|+.++|+|+.+++.+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 766554222222 23456677899999999999999999999999 99999999999999999999887432211
Q ss_pred cCCCCCcccccccccccccCCCccCccccc-----CCCCCchhhHHHHHHHHHHHHhC-CCCCCCc-------hHHHHHH
Q 005343 543 VPPSAADTITQYHMTTAAGTFCYIDPEYQQ-----TGMLGVKSDLYSLGVVLLQLITA-RPAMGLS-------HQVEQAI 609 (701)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----~~~~~~~sDvwSlGvil~elltG-~~pf~~~-------~~~~~~i 609 (701)
..........+|...|.+||... +-.-+...|.|.||+++++||.| +.||.+- ...+..|
T Consensus 167 -------~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~I 239 (637)
T COG4248 167 -------NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDI 239 (637)
T ss_pred -------ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhh
Confidence 11222346778999999999654 33356789999999999999987 8898643 2345667
Q ss_pred HcCccccccCcc------CCCCCHHH-HHHHHHHHHHhhccC--cCCCCChhhhhhHHHHHHHh
Q 005343 610 RNGTFSELLDPT------VTGWPVEA-ALSIAKLALQCCELR--KRDRPDLVSVVLPELIRLRD 664 (701)
Q Consensus 610 ~~~~~~~~ld~~------~~~~p~~~-~~~l~~li~~cl~~~--P~~RPt~~~vl~~~~~~l~~ 664 (701)
..|.|..--+.. -..||... +..+..+..+|+... +.-||+...=+ -.+..+++
T Consensus 240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~-aAl~al~~ 302 (637)
T COG4248 240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWV-AALDALRQ 302 (637)
T ss_pred hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHHHHH
Confidence 777765543322 23566554 445888889999853 67899986433 34444433
No 464
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.78 E-value=7e-08 Score=100.61 Aligned_cols=139 Identities=16% Similarity=0.069 Sum_probs=98.4
Q ss_pred eeeeecCceeEEEEEECCceEEEEEeCCCCCC-----------ChHHHHHHHHHHHhCC-----CCcEEEEece--e--c
Q 005343 400 RKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQ-----------GPRQFKQEVEILGSMR-----HTNMVILLGA--C--P 459 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~-----------~~~~~~~Ei~il~~l~-----HpnIv~l~g~--~--~ 459 (701)
+.+-......|+++.+.++.|.||........ ....+.+|...+..|. -|.+|-+... . .
T Consensus 28 e~v~~~~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~ 107 (268)
T PRK15123 28 EVFRELEGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPAT 107 (268)
T ss_pred cEEecCCCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCcc
Confidence 34444455567788888899999976433211 1114788999887774 3444333211 1 1
Q ss_pred CCCceEEeecCCC-ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC-------CCc
Q 005343 460 EYGCLVYEYMENG-SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ-------NYV 531 (701)
Q Consensus 460 ~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~-------~~~ 531 (701)
...+||+|++++. +|.+++.... ..+.+...+..++.+++..+.-||..| |+|+|+++.|||++. ++.
T Consensus 108 ~~s~LVte~l~~~~sL~~~~~~~~-~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~~~ 183 (268)
T PRK15123 108 RTSFIITEDLAPTISLEDYCADWA-TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREEDLK 183 (268)
T ss_pred ceeEEEEeeCCCCccHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCCce
Confidence 2357999999876 7888874322 234456677789999999999999999 999999999999975 578
Q ss_pred EEEEeeccccc
Q 005343 532 SKISDVGLARL 542 (701)
Q Consensus 532 ~KL~DFGla~~ 542 (701)
+.|+||+.++.
T Consensus 184 ~~LIDl~r~~~ 194 (268)
T PRK15123 184 LSVIDLHRAQI 194 (268)
T ss_pred EEEEECCcccc
Confidence 89999998753
No 465
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=98.71 E-value=1.2e-07 Score=108.06 Aligned_cols=129 Identities=21% Similarity=0.218 Sum_probs=109.1
Q ss_pred cCCCCEEEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHhhcCCeeeEEEE
Q 005343 18 ITANAITAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFARKRILAREVVL 97 (701)
Q Consensus 18 ~~~~~~IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~ 97 (701)
+....+|||+|+++..|.+.++||..++.+.++..++|||-.+. . ....+..+..+.....+|.+.| .+.+++
T Consensus 245 ~~~~e~ilvcI~~~~~~e~liR~a~RlA~~~~a~~~av~v~~~~-~----~~~~~~~~~~l~~~~~Lae~lG--ae~~~l 317 (890)
T COG2205 245 WAARERILVCISGSPGSEKLIRRAARLASRLHAKWTAVYVETPE-L----HRLSEKEARRLHENLRLAEELG--AEIVTL 317 (890)
T ss_pred ccccceEEEEECCCCchHHHHHHHHHHHHHhCCCeEEEEEeccc-c----ccccHHHHHHHHHHHHHHHHhC--CeEEEE
Confidence 34458999999999999999999999999999999999998862 1 1122344556667777777665 456678
Q ss_pred EcCChhHHHHHHHHHcCCCEEEEccCCCCcccccccCCCcchhhcccCCCceeEEEEe
Q 005343 98 QDIDVSSALIYYVKNNSVGNIVAGGSSRNLLTRKFRNLDLPSSLLKSAPESCAVYIIS 155 (701)
Q Consensus 98 ~~~~~~~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~gSva~~v~~~ap~~c~V~vV~ 155 (701)
.|++++++|++||..+++..||||.+.++.+.+.|. ||.+.++++.++ ...|++|.
T Consensus 318 ~~~dv~~~i~~ya~~~~~TkiViG~~~~~rw~~~~~-~~l~~~L~~~~~-~idv~ii~ 373 (890)
T COG2205 318 YGGDVAKAIARYAREHNATKIVIGRSRRSRWRRLFK-GSLADRLAREAP-GIDVHIVA 373 (890)
T ss_pred eCCcHHHHHHHHHHHcCCeeEEeCCCcchHHHHHhc-ccHHHHHHhcCC-CceEEEee
Confidence 889999999999999999999999999998888667 999999999998 89999998
No 466
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.68 E-value=1e-07 Score=94.04 Aligned_cols=124 Identities=26% Similarity=0.258 Sum_probs=79.8
Q ss_pred eEEEEEE-CCceEEEEEeCCCCCC----------------------C----hHHHHHHHHHHHhCCCCc--EEEEeceec
Q 005343 409 PVYKAQL-DHTSVAIKVLGPDISQ----------------------G----PRQFKQEVEILGSMRHTN--MVILLGACP 459 (701)
Q Consensus 409 ~Vyk~~~-~~~~vAiK~l~~~~~~----------------------~----~~~~~~Ei~il~~l~Hpn--Iv~l~g~~~ 459 (701)
.||.|.. ++..+|+|+.+..... . .....+|.+.|.++..-+ +-..+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899987 6778999997653110 0 012578999999997653 3444433
Q ss_pred CCCceEEeecC--CCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHH-HhhcCCCCeeecCCCCCCeeEcCCCcEEEEe
Q 005343 460 EYGCLVYEYME--NGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLF-LHQNKPEPLVHRDLKPANILLDQNYVSKISD 536 (701)
Q Consensus 460 ~~~~lV~Ey~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~-LH~~~~~~iiHrDLKp~NILl~~~~~~KL~D 536 (701)
...+|||||++ |..+.. |.... ++......++.+++..+.. +|..| |||+||.+.|||++.+ .+.|+|
T Consensus 79 ~~~~ivME~I~~~G~~~~~-l~~~~----~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~iID 149 (188)
T PF01163_consen 79 NRNVIVMEYIGEDGVPLPR-LKDVD----LSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVYIID 149 (188)
T ss_dssp ETTEEEEE--EETTEEGGC-HHHCG----GGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEEE--
T ss_pred eCCEEEEEecCCCccchhh-HHhcc----ccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEEEEe
Confidence 35689999998 544433 32211 1133455678888886655 57888 9999999999999988 899999
Q ss_pred ecccccc
Q 005343 537 VGLARLV 543 (701)
Q Consensus 537 FGla~~~ 543 (701)
||.+...
T Consensus 150 f~qav~~ 156 (188)
T PF01163_consen 150 FGQAVDS 156 (188)
T ss_dssp GTTEEET
T ss_pred cCcceec
Confidence 9988654
No 467
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.56 E-value=1.4e-08 Score=114.08 Aligned_cols=159 Identities=17% Similarity=0.279 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccc---cccccCCCccCccccc
Q 005343 496 AAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHM---TTAAGTFCYIDPEYQQ 572 (701)
Q Consensus 496 ~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~---~~~~gt~~Y~aPE~~~ 572 (701)
+.+++.||.|+|..- .+||++|.|++|.++.++.+||+.|+++.-..+...-....|.. ........|.|||++.
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345569999999764 29999999999999999999999999987654432211111111 1233456899999999
Q ss_pred CCCCCchhhHHHHHHHHHHHH-hCCCCCCCchH-HHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCC
Q 005343 573 TGMLGVKSDLYSLGVVLLQLI-TARPAMGLSHQ-VEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPD 650 (701)
Q Consensus 573 ~~~~~~~sDvwSlGvil~ell-tG~~pf~~~~~-~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt 650 (701)
....+.++|+||+||++|.+. .|++-+..... .......+ .++...-..+...+.++.+=+.+++..++.-||+
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~----~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~ 258 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRN----LLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPT 258 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhc----ccccccccccccCcHHHHHHHHHHhcCCcccCcc
Confidence 988999999999999999999 56655533211 11111111 1112222333455567889999999999999998
Q ss_pred hhhhhhHHHH
Q 005343 651 LVSVVLPELI 660 (701)
Q Consensus 651 ~~~vl~~~~~ 660 (701)
+..+..-+++
T Consensus 259 ~~~l~~~~ff 268 (700)
T KOG2137|consen 259 LDLLLSIPFF 268 (700)
T ss_pred hhhhhccccc
Confidence 8777644443
No 468
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.44 E-value=9.5e-07 Score=88.74 Aligned_cols=105 Identities=25% Similarity=0.252 Sum_probs=78.5
Q ss_pred hHHHHHHHHHHHhCCC-----CcEEEEecee---cCCCceEEeecCCC-ChhhHhcccCCCCCCChHHHHHHHHHHHHHH
Q 005343 433 PRQFKQEVEILGSMRH-----TNMVILLGAC---PEYGCLVYEYMENG-SLEDRLFQKDNSPPIHWSIRFKIAAEIATAL 503 (701)
Q Consensus 433 ~~~~~~Ei~il~~l~H-----pnIv~l~g~~---~~~~~lV~Ey~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL 503 (701)
.....+|...+..|.. |..+-+...- ....+||+|++++. +|.+++..... ++......++.+++..+
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLI 131 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHH
Confidence 3457888888877743 3333332110 12237999999884 78888854222 45566778999999999
Q ss_pred HHHhhcCCCCeeecCCCCCCeeEcCCC---cEEEEeecccccc
Q 005343 504 LFLHQNKPEPLVHRDLKPANILLDQNY---VSKISDVGLARLV 543 (701)
Q Consensus 504 ~~LH~~~~~~iiHrDLKp~NILl~~~~---~~KL~DFGla~~~ 543 (701)
.-||..| |+|+|++|.|||++.++ .+.|+||+-++..
T Consensus 132 ~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 132 AKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 9999999 99999999999998876 8899999987753
No 469
>PRK09902 hypothetical protein; Provisional
Probab=98.43 E-value=3.5e-06 Score=83.93 Aligned_cols=136 Identities=16% Similarity=0.143 Sum_probs=101.3
Q ss_pred eeecCceeEEEEEECCceEEEEEeCCCC------CCChHHHHHHHHHHHhCCCCc--EEEEeceec---C----CCceEE
Q 005343 402 IGEGGYGPVYKAQLDHTSVAIKVLGPDI------SQGPRQFKQEVEILGSMRHTN--MVILLGACP---E----YGCLVY 466 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~~~~vAiK~l~~~~------~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~~~---~----~~~lV~ 466 (701)
-|+||-+-|+...+.+..+-+|.-.... ......|.+|+..|..|..-+ +.... ++. . ..+||+
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 5779999999999888888888654221 124467999999999885322 22222 221 1 237999
Q ss_pred eecCC-CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCc--EEEEeeccccc
Q 005343 467 EYMEN-GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYV--SKISDVGLARL 542 (701)
Q Consensus 467 Ey~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~--~KL~DFGla~~ 542 (701)
|-+.| -+|.+++... ...+.+...+..++.+|+..|.-||..| +.|+|+.+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~-~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQH-AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcC-CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98754 5788877443 2335677778899999999999999999 999999999999986666 89999987653
No 470
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.42 E-value=1.1e-06 Score=89.61 Aligned_cols=135 Identities=22% Similarity=0.146 Sum_probs=93.4
Q ss_pred CceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCCC----------------------ChHHHHHHHHHHHhCCCC--
Q 005343 395 YFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQ----------------------GPRQFKQEVEILGSMRHT-- 449 (701)
Q Consensus 395 ~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~----------------------~~~~~~~Ei~il~~l~Hp-- 449 (701)
-+.+..+||-|.=|.||.|.. ++.++|||..+..... .....++|.++|.+|...
T Consensus 92 ve~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 92 VEAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HHhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 356778999999999999998 5888999986432110 112367899999888543
Q ss_pred cEEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCC
Q 005343 450 NMVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQN 529 (701)
Q Consensus 450 nIv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~ 529 (701)
.+..-++ .+..++||||++|-.|...- +..+..-.|+..|++-+.-+-..| |||+|+++-|||++.+
T Consensus 172 ~VP~P~~--~nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~~d 238 (304)
T COG0478 172 KVPKPIA--WNRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVTED 238 (304)
T ss_pred CCCCccc--cccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEecC
Confidence 2222222 23447999999886554321 112223345555665555555778 9999999999999999
Q ss_pred CcEEEEeeccccc
Q 005343 530 YVSKISDVGLARL 542 (701)
Q Consensus 530 ~~~KL~DFGla~~ 542 (701)
|.+.++||-.+..
T Consensus 239 g~~~vIDwPQ~v~ 251 (304)
T COG0478 239 GDIVVIDWPQAVP 251 (304)
T ss_pred CCEEEEeCccccc
Confidence 9999999976543
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.29 E-value=1.7e-05 Score=78.34 Aligned_cols=105 Identities=23% Similarity=0.234 Sum_probs=85.0
Q ss_pred HHHHHHHHhCCC-CcEEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCee
Q 005343 437 KQEVEILGSMRH-TNMVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLV 515 (701)
Q Consensus 437 ~~Ei~il~~l~H-pnIv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~ii 515 (701)
..|.-+|..+.+ +++.+++|+|++ .+|.||...+++...-..-......+|..|.+||.+++..+.+|+.....++.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~ 84 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFFY 84 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcEE
Confidence 458888888876 699999999954 68999998777653211111223468999999999999999999987666799
Q ss_pred ecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 516 HRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 516 HrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
-.|++|+|+-++++|.+|+.|...+-..
T Consensus 85 lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 85 LCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EeecchHHeEEeCCCcEEEEechhcchh
Confidence 9999999999999999999999877544
No 472
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.29 E-value=5.2e-06 Score=83.03 Aligned_cols=135 Identities=21% Similarity=0.218 Sum_probs=93.5
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHH---------HHHHHHHHHhCCCC---cEEEEece--
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQ---------FKQEVEILGSMRHT---NMVILLGA-- 457 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~---------~~~Ei~il~~l~Hp---nIv~l~g~-- 457 (701)
..++|.+.+.+-......|.+-..+++.+.+|..+.......+. ..+.+..+.+++.. ....++.+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 46789999999988899999999999999999876654222222 23344433333221 11111111
Q ss_pred -----ecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcE
Q 005343 458 -----CPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVS 532 (701)
Q Consensus 458 -----~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~ 532 (701)
+....+|+|||++|..|.+... ++. .++..+..++.-||..| ++|+|..|.|+++++++ +
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECCc-E
Confidence 1233468999999988876531 222 25567888899999999 99999999999999766 8
Q ss_pred EEEeecccc
Q 005343 533 KISDVGLAR 541 (701)
Q Consensus 533 KL~DFGla~ 541 (701)
++.||+..+
T Consensus 174 ~iID~~~k~ 182 (229)
T PF06176_consen 174 RIIDTQGKR 182 (229)
T ss_pred EEEECcccc
Confidence 999998654
No 473
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.27 E-value=1e-05 Score=81.83 Aligned_cols=152 Identities=23% Similarity=0.244 Sum_probs=95.4
Q ss_pred ccCHHHHHHhhcCceeeeeee---ecCceeEEEEEE-CCceEEEEEeCCCCCCCh-------------------HH----
Q 005343 383 KYTIEEIEAATDYFSISRKIG---EGGYGPVYKAQL-DHTSVAIKVLGPDISQGP-------------------RQ---- 435 (701)
Q Consensus 383 ~~~~~ei~~~~~~f~~~~~IG---~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~~-------------------~~---- 435 (701)
..+.+.+....+...+....| .|.-..||+|.. ++..+|+|+++....... ++
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 344555555666666655555 566678999886 577899999875432211 11
Q ss_pred -HHHHHHHHHhCCCCcE--EEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhh-cCC
Q 005343 436 -FKQEVEILGSMRHTNM--VILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQ-NKP 511 (701)
Q Consensus 436 -~~~Ei~il~~l~HpnI--v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~-~~~ 511 (701)
..+|+.-|+++..-.| -.-++ .....|||||+....+ -...-...++.......+..+++..+.-|-. .+
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~--~~~nVLvMEfIg~~g~---pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~- 187 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIA--FRNNVLVMEFIGDDGL---PAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAG- 187 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCcee--ecCCeEEEEeccCCCC---CCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcC-
Confidence 2456666666532211 11111 1245799999943210 1111111223333566778888888888776 77
Q ss_pred CCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 512 EPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 512 ~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||+||+.-|||+. ++.+.|+|||.|...
T Consensus 188 --LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 188 --LVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred --cccccchhhheEEE-CCeEEEEECcccccc
Confidence 99999999999999 788999999988654
No 474
>cd01984 AANH_like Adenine nucleotide alpha hydrolases superfamily including N type ATP PPases, ATP sulphurylases Universal Stress Response protein and electron transfer flavoprotein (ETF). The domain forms a apha/beta/apha fold which binds to Adenosine nucleotide.
Probab=98.18 E-value=4.1e-06 Score=71.59 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=72.8
Q ss_pred EEEEeCCCcchHHHHHHHHHhccCCCCeEEEEEEecCCCCCCCCCCChHHHHHHHHHHHHHHhhcCCeeeEEEEEcCChh
Q 005343 24 TAVAIDADKSSQYAVKWAVDNLLNETSQYVLLHVRNHSSNPRGRPATNDELQKLFLPYRGLFARKRILAREVVLQDIDVS 103 (701)
Q Consensus 24 IlVavD~s~~S~~Al~wA~~~~~~~g~~v~llHV~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~~~~~v~~~~~~~ 103 (701)
|+||++|+..|..++.||.... ..+..++++|+. ...
T Consensus 1 ilv~~sgg~dS~~~l~~~~~~~-~~~~~~~~~~~~------------------------------------------~~~ 37 (86)
T cd01984 1 ILVALSGGLDSSVLLHLAKRLK-SGGPEVVALVVV------------------------------------------AFV 37 (86)
T ss_pred CEEEeeCCHHHHHHHHHHHHHH-hcCCCEEEEEeH------------------------------------------HHH
Confidence 6899999999999999999976 446678888876 456
Q ss_pred HHHHHHHHHcCCCEEEEccCCCCcccccccCC-CcchhhcccCCCceeEEE
Q 005343 104 SALIYYVKNNSVGNIVAGGSSRNLLTRKFRNL-DLPSSLLKSAPESCAVYI 153 (701)
Q Consensus 104 ~~Iv~~a~~~~~d~IV~Gs~g~~~~~r~~~~g-Sva~~v~~~ap~~c~V~v 153 (701)
+.+.++|++.++|+||+|+++.....+.+. | +++.++++.++ |||+.
T Consensus 38 ~~~~~~a~~~~~~~Iv~G~~~~d~~~~~~~-~~~~~~~~~~~~~--~~vl~ 85 (86)
T cd01984 38 RILKRLAAEEGADVIILGHNADDVAGRRLG-ASANVLVVIKGAG--IPVLT 85 (86)
T ss_pred HHHHHHHHHcCCCEEEEcCCchhhhhhccC-chhhhhhcccccC--CceeC
Confidence 778899999999999999999998888555 7 99999999998 99874
No 475
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.18 E-value=1.8e-05 Score=80.77 Aligned_cols=138 Identities=16% Similarity=0.210 Sum_probs=79.2
Q ss_pred eeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcE--EEEecee--cCCCceEEeecCCCC-h
Q 005343 400 RKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNM--VILLGAC--PEYGCLVYEYMENGS-L 474 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnI--v~l~g~~--~~~~~lV~Ey~~~gs-L 474 (701)
..||.|..+.||+. .+..+++|..... .......+|.+++..+..-.+ ...++++ .+...+|||+++|.+ +
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~--~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~ 82 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPG--FDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSF 82 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCC--CCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccch
Confidence 57999999999984 3456788887653 344567899999988753222 3334443 333478999998863 2
Q ss_pred hhHh--------------cc-----cCC-CCCCChHHH-HHHHH----------HHHH-HHHHHhhc-CCCCeeecCCCC
Q 005343 475 EDRL--------------FQ-----KDN-SPPIHWSIR-FKIAA----------EIAT-ALLFLHQN-KPEPLVHRDLKP 521 (701)
Q Consensus 475 ~~~l--------------~~-----~~~-~~~l~~~~~-~~i~~----------qia~-aL~~LH~~-~~~~iiHrDLKp 521 (701)
...+ .. +.. ....+.... ..+.. .+.. ...+|... .+..++|+|+.|
T Consensus 83 ~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~ 162 (226)
T TIGR02172 83 SRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQI 162 (226)
T ss_pred hhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCC
Confidence 1111 00 000 001111110 00100 0111 12222211 122478999999
Q ss_pred CCeeEcCCCcEEEEeeccccc
Q 005343 522 ANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 522 ~NILl~~~~~~KL~DFGla~~ 542 (701)
.||+++.++ +.|+||+.+..
T Consensus 163 ~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 163 GNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CcEEEcCCC-cEEEechhcCc
Confidence 999999888 99999998764
No 476
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.17 E-value=1e-05 Score=81.64 Aligned_cols=142 Identities=24% Similarity=0.291 Sum_probs=83.6
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCC--cEEEEecee---c--CCCceEEeecCC
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHT--NMVILLGAC---P--EYGCLVYEYMEN 471 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~g~~---~--~~~~lV~Ey~~~ 471 (701)
++.|+.|..+.||+....+..+++|+.... .....+.+|..++..+... .+..++..+ . ...+++|++++|
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g 79 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPG 79 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESS
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecc
Confidence 467999999999999998888999997654 3456688899998887432 233444422 1 123789999999
Q ss_pred CChhh----------------Hhc---cc-CCCCCCChHHH---------HHH------------HHHHHH-HHHHHhhc
Q 005343 472 GSLED----------------RLF---QK-DNSPPIHWSIR---------FKI------------AAEIAT-ALLFLHQN 509 (701)
Q Consensus 472 gsL~~----------------~l~---~~-~~~~~l~~~~~---------~~i------------~~qia~-aL~~LH~~ 509 (701)
..+.. .+. .. ....++.+... ... ...+.. .+..++..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (239)
T PF01636_consen 80 RPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEAL 159 (239)
T ss_dssp EEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhh
Confidence 87777 111 11 01111111110 000 111222 33344432
Q ss_pred ----CCCCeeecCCCCCCeeEc-CCCcEEEEeeccccc
Q 005343 510 ----KPEPLVHRDLKPANILLD-QNYVSKISDVGLARL 542 (701)
Q Consensus 510 ----~~~~iiHrDLKp~NILl~-~~~~~KL~DFGla~~ 542 (701)
.+..++|+|+.|.|||++ .++.+-|.||+.+.+
T Consensus 160 ~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 160 LPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 334599999999999999 666668999998754
No 477
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.15 E-value=1.3e-05 Score=90.53 Aligned_cols=138 Identities=21% Similarity=0.281 Sum_probs=91.1
Q ss_pred eeeeecCceeEEEEEEC-CceEEEEEeCCCCCCCh--------------------------H----H----------HHH
Q 005343 400 RKIGEGGYGPVYKAQLD-HTSVAIKVLGPDISQGP--------------------------R----Q----------FKQ 438 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~-~~~vAiK~l~~~~~~~~--------------------------~----~----------~~~ 438 (701)
..|+.++-|.||+|++. |..||||+.+++..... . + +.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 68999999999999996 78899999887632211 0 0 233
Q ss_pred HHHHHHhCC-----CCcEE--EEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHH-HHHhhcC
Q 005343 439 EVEILGSMR-----HTNMV--ILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATAL-LFLHQNK 510 (701)
Q Consensus 439 Ei~il~~l~-----HpnIv--~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL-~~LH~~~ 510 (701)
|..-+.+++ .|++. +++--+.....|+|||++|-.+.+....+. ..++. ..|+..++.+. .-+=..|
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~--~g~d~---k~ia~~~~~~f~~q~~~dg 285 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS--AGIDR---KELAELLVRAFLRQLLRDG 285 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh--cCCCH---HHHHHHHHHHHHHHHHhcC
Confidence 444443332 23332 222222345589999999998888753322 22332 23444444442 2222356
Q ss_pred CCCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 511 PEPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 511 ~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
++|.|..|.||+++.+|.+-+.|||+...+++
T Consensus 286 ---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 286 ---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred ---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 99999999999999999999999999887654
No 478
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.06 E-value=3e-05 Score=79.76 Aligned_cols=139 Identities=15% Similarity=0.136 Sum_probs=81.9
Q ss_pred eeeecCc-eeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCC-CCcEEEEeceecC--CCceEEeecCCCChhh
Q 005343 401 KIGEGGY-GPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMR-HTNMVILLGACPE--YGCLVYEYMENGSLED 476 (701)
Q Consensus 401 ~IG~G~f-g~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 476 (701)
.|-.|.+ ..||+....+..+.+|+..... ...+.+|++++..+. +--+.++++++.. ..++|||+++|.+|..
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 3445555 7899998877778888875432 345778999988874 2223355555543 4689999999887764
Q ss_pred Hhc-------------------ccCC-CCCCChH--HHHHHHH--------------------HHHHHHHHHhhc----C
Q 005343 477 RLF-------------------QKDN-SPPIHWS--IRFKIAA--------------------EIATALLFLHQN----K 510 (701)
Q Consensus 477 ~l~-------------------~~~~-~~~l~~~--~~~~i~~--------------------qia~aL~~LH~~----~ 510 (701)
... .... ..++... .+..... .+...+..|-.. .
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 321 0000 0011100 0000000 011112222111 1
Q ss_pred CCCeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 511 PEPLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 511 ~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
+..++|+|+.|.|||+++++.+.|+||+.+..
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~~ 193 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLGV 193 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEcccccc
Confidence 23489999999999999988889999998753
No 479
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.02 E-value=2.8e-05 Score=74.68 Aligned_cols=128 Identities=18% Similarity=0.200 Sum_probs=91.5
Q ss_pred eeeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEEE-EeceecCCCceEEeecCCCChhh
Q 005343 398 ISRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMVI-LLGACPEYGCLVYEYMENGSLED 476 (701)
Q Consensus 398 ~~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv~-l~g~~~~~~~lV~Ey~~~gsL~~ 476 (701)
..+.||+|.+|.||+|.+.+..+|+|+-..+ .....+..|.++|..+.--++.+ +|.+ +..++.|||+.|-.|.+
T Consensus 26 v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~y--g~~~i~me~i~G~~L~~ 101 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWRGGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFY--GEDFIRMEYIDGRPLGK 101 (201)
T ss_pred hhhhhhcccccEEEEeeccCceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEe--chhhhhhhhhcCcchhh
Confidence 3567999999999999999999999998765 34567899999998887665543 3322 22356699999888876
Q ss_pred HhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCC-CCCeeEcCCCcEEEEeeccccc
Q 005343 477 RLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLK-PANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 477 ~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLK-p~NILl~~~~~~KL~DFGla~~ 542 (701)
.-... ... -...+++.-.-|...| |-|..|. |..++|.+++.+.|+||.-|..
T Consensus 102 ~~~~~------~rk----~l~~vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 102 LEIGG------DRK----HLLRVLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred hhhcc------cHH----HHHHHHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 54211 122 2345566645566778 9999997 5444454555899999998863
No 480
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.97 E-value=6.3e-07 Score=99.89 Aligned_cols=188 Identities=19% Similarity=0.152 Sum_probs=131.3
Q ss_pred hhcCceeeeeeeecCceeEEEEEECCce-EEEEEeCCCCCCChHHHHHHHHHHHhCCCCc-EEEEecee--cCCCceEEe
Q 005343 392 ATDYFSISRKIGEGGYGPVYKAQLDHTS-VAIKVLGPDISQGPRQFKQEVEILGSMRHTN-MVILLGAC--PEYGCLVYE 467 (701)
Q Consensus 392 ~~~~f~~~~~IG~G~fg~Vyk~~~~~~~-vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hpn-Iv~l~g~~--~~~~~lV~E 467 (701)
.+..|.....+++|+++.+||.+...+. ...+++... ....-++++|.+++||| .+..++-+ .++..++++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~ 314 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMR 314 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhh
Confidence 4445555667899999999998764433 334444332 44567899999999999 55555555 334578999
Q ss_pred ecCCC-ChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCC
Q 005343 468 YMENG-SLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPS 546 (701)
Q Consensus 468 y~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~ 546 (701)
|+.+| +..+.. ......+..-+...+...-+.+|++||+.- =+||| |||..+ +..|.+||+....+...
T Consensus 315 i~s~~rs~~~~~--~~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~ 384 (829)
T KOG0576|consen 315 ICSTGRSSALEM--TVSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQLTRT 384 (829)
T ss_pred hhcCCccccccC--ChhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcccCcc
Confidence 99877 221111 011111233334455666678899999864 58999 887766 56799999988766432
Q ss_pred CCcccccccccccccCCCccCcccccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 005343 547 AADTITQYHMTTAAGTFCYIDPEYQQTGMLGVKSDLYSLGVVLLQLITARPAMGL 601 (701)
Q Consensus 547 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 601 (701)
. ......+|+.+++||....+.+....|+|++|+--.+|--|-+|-..
T Consensus 385 ~-------~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~ 432 (829)
T KOG0576|consen 385 M-------KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS 432 (829)
T ss_pred c-------ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence 1 34677899999999999999999999999999877788878777543
No 481
>PLN02876 acyl-CoA dehydrogenase
Probab=97.96 E-value=9.2e-05 Score=89.61 Aligned_cols=147 Identities=20% Similarity=0.331 Sum_probs=91.3
Q ss_pred eeeeeecCceeEEEEEECC----ceEEEEEeCCCCC-CChHHHHHHHHHHHhCC-CCcE--EEEeceecC-----CCceE
Q 005343 399 SRKIGEGGYGPVYKAQLDH----TSVAIKVLGPDIS-QGPRQFKQEVEILGSMR-HTNM--VILLGACPE-----YGCLV 465 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~----~~vAiK~l~~~~~-~~~~~~~~Ei~il~~l~-HpnI--v~l~g~~~~-----~~~lV 465 (701)
...|+.|.++.+|+....+ ..+++|+...... .....+.+|+.+|+.+. |+++ ..++++|.+ ..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 5678999999999988754 3577776544321 23456899999999995 6654 667777754 35899
Q ss_pred EeecCCCChhh--------------------Hh---cccCC--------CCCCCh--HHHHHHH---------------H
Q 005343 466 YEYMENGSLED--------------------RL---FQKDN--------SPPIHW--SIRFKIA---------------A 497 (701)
Q Consensus 466 ~Ey~~~gsL~~--------------------~l---~~~~~--------~~~l~~--~~~~~i~---------------~ 497 (701)
|||++|..+.+ .| +.-.. ..+..+ .+..++. .
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 99998764322 11 11000 001111 1111111 1
Q ss_pred HHHHHHHHHhhcCCC--------CeeecCCCCCCeeEcC--CCcEEEEeeccccccCC
Q 005343 498 EIATALLFLHQNKPE--------PLVHRDLKPANILLDQ--NYVSKISDVGLARLVPP 545 (701)
Q Consensus 498 qia~aL~~LH~~~~~--------~iiHrDLKp~NILl~~--~~~~KL~DFGla~~~~~ 545 (701)
.+...+.+|..+-|. .+||+|+++.|||++. ...+-|.||+++.+-++
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~GdP 260 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQ 260 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccCCh
Confidence 123345677554442 3999999999999975 33457999999876443
No 482
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.87 E-value=5.7e-05 Score=85.26 Aligned_cols=138 Identities=20% Similarity=0.262 Sum_probs=89.9
Q ss_pred eeeeecCceeEEEEEE-CCceEEEEEeCCCCCCCh-------------------------------H------HHHHHHH
Q 005343 400 RKIGEGGYGPVYKAQL-DHTSVAIKVLGPDISQGP-------------------------------R------QFKQEVE 441 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~~~~-------------------------------~------~~~~Ei~ 441 (701)
+.||.-+.|.||+|+. ++..||||+-++...... + .|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 5799999999999998 556699999877543220 0 1334443
Q ss_pred HHHh----CCCCc------EEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHH-HhhcC
Q 005343 442 ILGS----MRHTN------MVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLF-LHQNK 510 (701)
Q Consensus 442 il~~----l~Hpn------Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~-LH~~~ 510 (701)
-..+ +.|-+ |-++|-.+.....|+||||+|..+.|...-... .++.. .|+..+.++... |=..|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~---~i~~~l~~~~~~qIf~~G 321 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPH---DILNKLVEAYLEQIFKTG 321 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHH---HHHHHHHHHHHHHHHhcC
Confidence 3322 23444 333444444556899999999888776433222 23434 344445444222 22345
Q ss_pred CCCeeecCCCCCCeeEc----CCCcEEEEeeccccccCC
Q 005343 511 PEPLVHRDLKPANILLD----QNYVSKISDVGLARLVPP 545 (701)
Q Consensus 511 ~~~iiHrDLKp~NILl~----~~~~~KL~DFGla~~~~~ 545 (701)
++|.|-.|.|||+. .++.+.+-|||+...++.
T Consensus 322 ---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~ 357 (538)
T KOG1235|consen 322 ---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH 357 (538)
T ss_pred ---CccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence 99999999999998 378899999999887643
No 483
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.86 E-value=9.8e-05 Score=75.61 Aligned_cols=72 Identities=15% Similarity=0.268 Sum_probs=44.6
Q ss_pred eeeeeecCce-eEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCC---cEEEEecee--cC---CCceEEeec
Q 005343 399 SRKIGEGGYG-PVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHT---NMVILLGAC--PE---YGCLVYEYM 469 (701)
Q Consensus 399 ~~~IG~G~fg-~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~g~~--~~---~~~lV~Ey~ 469 (701)
++.|+.||.. .||+. +..+++|+.... .....+.+|.++|..+... .+-..++.. .+ ..+++|+++
T Consensus 2 ~~~~~~gG~~n~vy~~---~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 2 IEPVDSGGTDNATFRL---GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred ceeccCCCcccceEEc---CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 3567877776 59975 345777875432 2345789999999777421 122233322 22 237899999
Q ss_pred CCCChh
Q 005343 470 ENGSLE 475 (701)
Q Consensus 470 ~~gsL~ 475 (701)
+|.++.
T Consensus 77 ~G~~l~ 82 (235)
T cd05155 77 EGETAT 82 (235)
T ss_pred cCCCCC
Confidence 987764
No 484
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.76 E-value=0.00022 Score=72.71 Aligned_cols=141 Identities=18% Similarity=0.278 Sum_probs=81.5
Q ss_pred eeeeeecCceeEEEEEEC---CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcE-EEEeceecCCCceEEeecCCCCh
Q 005343 399 SRKIGEGGYGPVYKAQLD---HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNM-VILLGACPEYGCLVYEYMENGSL 474 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~---~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnI-v~l~g~~~~~~~lV~Ey~~~gsL 474 (701)
++.|..|-...+|+.... +..|++|+..... ...-...+|+.++..+...++ .++++.+. ..++|||++|.++
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~-~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l 79 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKT-ELIIDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTL 79 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCc-cceecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcC
Confidence 356777888899999875 4678999775432 111233578888888853333 34444443 3589999998765
Q ss_pred hhH----------h-------cccCCC--------CCC-ChHHHHHHHH----------------------HHHHHHHH-
Q 005343 475 EDR----------L-------FQKDNS--------PPI-HWSIRFKIAA----------------------EIATALLF- 505 (701)
Q Consensus 475 ~~~----------l-------~~~~~~--------~~l-~~~~~~~i~~----------------------qia~aL~~- 505 (701)
... + +..... ... .+..+..+.. .+...+..
T Consensus 80 ~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 159 (235)
T cd05157 80 EPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWL 159 (235)
T ss_pred CHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHH
Confidence 321 1 111111 011 1222112211 11111112
Q ss_pred ---Hhhc-CCCCeeecCCCCCCeeEcC-CCcEEEEeeccccc
Q 005343 506 ---LHQN-KPEPLVHRDLKPANILLDQ-NYVSKISDVGLARL 542 (701)
Q Consensus 506 ---LH~~-~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~ 542 (701)
+-.. .+..++|+|+.|.|||++. ++.+.|+||..|.+
T Consensus 160 ~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~ 201 (235)
T cd05157 160 KELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGY 201 (235)
T ss_pred HHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCc
Confidence 2211 2334899999999999998 57899999998764
No 485
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.74 E-value=0.00013 Score=75.82 Aligned_cols=138 Identities=14% Similarity=0.114 Sum_probs=78.9
Q ss_pred eeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEE-EEeceecCCCceEEeecCCCChhhH---
Q 005343 402 IGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMV-ILLGACPEYGCLVYEYMENGSLEDR--- 477 (701)
Q Consensus 402 IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv-~l~g~~~~~~~lV~Ey~~~gsL~~~--- 477 (701)
+..|-.+.+|+....+..+++|+.......-.-...+|..+++.+....++ .+++.+ ..++||||++|..+...
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~--~~~~v~e~i~G~~~~~~~~~ 81 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVN--EHWLLVEWLEGEVITLDQFV 81 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEe--CCEEEEEeccCccccccccc
Confidence 456778899999887778999876543222112357899999888543222 233333 35799999998665321
Q ss_pred --------------hcccC-CCCCCChHHH-HHHHHHH---------HHHHHHHhhc-----CCCCeeecCCCCCCeeEc
Q 005343 478 --------------LFQKD-NSPPIHWSIR-FKIAAEI---------ATALLFLHQN-----KPEPLVHRDLKPANILLD 527 (701)
Q Consensus 478 --------------l~~~~-~~~~l~~~~~-~~i~~qi---------a~aL~~LH~~-----~~~~iiHrDLKp~NILl~ 527 (701)
|+... ...+++...+ ..+..++ ...+..+-.. .+..++|+|+.|.||+++
T Consensus 82 ~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~~ 161 (256)
T TIGR02721 82 ALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVVT 161 (256)
T ss_pred CchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEEe
Confidence 11111 0111222111 1111111 1112222111 122489999999999999
Q ss_pred CCCcEEEEeeccccc
Q 005343 528 QNYVSKISDVGLARL 542 (701)
Q Consensus 528 ~~~~~KL~DFGla~~ 542 (701)
.++ +.|+||+.|..
T Consensus 162 ~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 162 PQG-LKLIDWEYASD 175 (256)
T ss_pred CCC-CEEEeccccCc
Confidence 887 78999998864
No 486
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.70 E-value=0.00012 Score=87.12 Aligned_cols=200 Identities=19% Similarity=0.166 Sum_probs=139.6
Q ss_pred HHHHHHHHHhCCCCcEEEEeceecCCC------ceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhc
Q 005343 436 FKQEVEILGSMRHTNMVILLGACPEYG------CLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQN 509 (701)
Q Consensus 436 ~~~Ei~il~~l~HpnIv~l~g~~~~~~------~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~ 509 (701)
...|+..+..+.|+|++.++++..+.. .+..+|+..-++...+ ......+..+.+.+..++.+||.|+|+.
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~---q~v~~i~~~~~r~~~~~~~~GL~~~h~~ 305 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLL---QSVGSIPLETLRILHQKLLEGLAYLHSL 305 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHH---hhccccCHHHHHHHHHHHhhhHHHHHHh
Confidence 345677788889999999888763322 2345788887877766 3445678888888999999999999998
Q ss_pred CCCCeeecCCCCC---CeeEcCCCcEEEE--eeccccccCCCCCcccccccccccccCCCccCcccccCCCCCc--hhhH
Q 005343 510 KPEPLVHRDLKPA---NILLDQNYVSKIS--DVGLARLVPPSAADTITQYHMTTAAGTFCYIDPEYQQTGMLGV--KSDL 582 (701)
Q Consensus 510 ~~~~iiHrDLKp~---NILl~~~~~~KL~--DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~--~sDv 582 (701)
. ..|.-|..+ +...+..+.+.++ ||+....++.... .....-+..|.+||......+.. ..|+
T Consensus 306 ~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~-------~~~~~~~~~~~~~e~~~~~~~~~~r~~dL 375 (1351)
T KOG1035|consen 306 S---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK-------SFSDLLAEIRNADEDLKENTAKKSRLTDL 375 (1351)
T ss_pred c---cceeEEecccccccccCccceeecchhhhcccccCCCccc-------chhhcCccccccccccccccchhhhhhHH
Confidence 6 666655555 5555666777777 8888776543221 12223445577788766666544 4799
Q ss_pred HHHHHHHHHHHhCCCCCCCchHHHHHHHcCccccccCccCCCCCHHHHHHHHHHHHHhhccCcCCCCChhhhhhHHHHHH
Q 005343 583 YSLGVVLLQLITARPAMGLSHQVEQAIRNGTFSELLDPTVTGWPVEAALSIAKLALQCCELRKRDRPDLVSVVLPELIRL 662 (701)
Q Consensus 583 wSlGvil~elltG~~pf~~~~~~~~~i~~~~~~~~ld~~~~~~p~~~~~~l~~li~~cl~~~P~~RPt~~~vl~~~~~~l 662 (701)
|.+|..+..+..|..+-.....+.. +++... ...+..+...|+.-++++|+...+++.|++.+.
T Consensus 376 ~~lgll~~~~~~~~~i~~~~~~~~~---------~l~~~~-------~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~ 439 (1351)
T KOG1035|consen 376 WCLGLLLLQLSQGEDISEKSAVPVS---------LLDVLS-------TSELLDALPKCLDEDSEERLSALELLTHPFLRF 439 (1351)
T ss_pred HHHHHHHhhhhhcCcccccccchhh---------hhcccc-------chhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence 9999999999998866432222111 111111 114678899999999999999999999999886
Q ss_pred Hh
Q 005343 663 RD 664 (701)
Q Consensus 663 ~~ 664 (701)
..
T Consensus 440 ~~ 441 (1351)
T KOG1035|consen 440 PT 441 (1351)
T ss_pred cc
Confidence 43
No 487
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.69 E-value=0.00068 Score=74.61 Aligned_cols=75 Identities=20% Similarity=0.197 Sum_probs=55.6
Q ss_pred eeeeeecCceeEEEEEECCc--eEEEEEeCCCC-------CCChHHHHHHHHHHHhCC---CCcEEEEeceecCCCceEE
Q 005343 399 SRKIGEGGYGPVYKAQLDHT--SVAIKVLGPDI-------SQGPRQFKQEVEILGSMR---HTNMVILLGACPEYGCLVY 466 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~--~vAiK~l~~~~-------~~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~~~~lV~ 466 (701)
.+.||.|.+..||++...+. .|+||.-.+.. ......+..|.+.|..+. -.++..++.+..+..++||
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVM 110 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVM 110 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEE
Confidence 36799999999999998653 79999854221 124566788888888763 3456778888777789999
Q ss_pred eecCCCC
Q 005343 467 EYMENGS 473 (701)
Q Consensus 467 Ey~~~gs 473 (701)
||+++..
T Consensus 111 E~L~~~~ 117 (401)
T PRK09550 111 EDLSDHK 117 (401)
T ss_pred ecCCCcc
Confidence 9998643
No 488
>PRK10593 hypothetical protein; Provisional
Probab=97.64 E-value=0.00062 Score=72.42 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=54.0
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCC---CcEEEEeceec-----CCCceEEeecC
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRH---TNMVILLGACP-----EYGCLVYEYME 470 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~H---pnIv~l~g~~~-----~~~~lV~Ey~~ 470 (701)
.+.||.|..+.||.....+..+.+|..+. ......+..|...|+.|.- ..+.++++.|. ...+||||+++
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~~~~k~~~~--~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~ 96 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGNPMPLMARS--FSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLR 96 (297)
T ss_pred eeecCCccceeEEEEEcCCCCEEEEEecc--cccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccC
Confidence 46799999999999987655677787533 1234578999999988843 34566776653 33589999999
Q ss_pred CCCh
Q 005343 471 NGSL 474 (701)
Q Consensus 471 ~gsL 474 (701)
|+++
T Consensus 97 G~~~ 100 (297)
T PRK10593 97 GVSV 100 (297)
T ss_pred CEec
Confidence 8765
No 489
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.62 E-value=0.00064 Score=67.41 Aligned_cols=123 Identities=22% Similarity=0.366 Sum_probs=89.3
Q ss_pred cCceeeeeeeecCc-eeEEEEEECCceEEEEEeCC---CCC------------------CChHHHHHHHHHHHhCC---C
Q 005343 394 DYFSISRKIGEGGY-GPVYKAQLDHTSVAIKVLGP---DIS------------------QGPRQFKQEVEILGSMR---H 448 (701)
Q Consensus 394 ~~f~~~~~IG~G~f-g~Vyk~~~~~~~vAiK~l~~---~~~------------------~~~~~~~~Ei~il~~l~---H 448 (701)
..++.++.||.|.- |.||++...+..+|+|++.. ... ....-|..|.+...+|+ +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 67899999999999 99999999999999999322 110 01123788998887774 4
Q ss_pred CcE--EEEecee--c-CC-----------------CceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHH
Q 005343 449 TNM--VILLGAC--P-EY-----------------GCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFL 506 (701)
Q Consensus 449 pnI--v~l~g~~--~-~~-----------------~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~L 506 (701)
.++ |+.+|+. . +. ..||.||.+... .+... -+.+|.+-|..+
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~~----~~~~~~~dl~~~ 180 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQIR----DIPQMLRDLKIL 180 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccchh----HHHHHHHHHHHH
Confidence 455 7888875 1 00 036777775532 12222 356788889999
Q ss_pred hhcCCCCeeecCCCCCCeeEcCCCcEEEEeeccc
Q 005343 507 HQNKPEPLVHRDLKPANILLDQNYVSKISDVGLA 540 (701)
Q Consensus 507 H~~~~~~iiHrDLKp~NILl~~~~~~KL~DFGla 540 (701)
|..| |+-+|+++.|.. + -||+|||.+
T Consensus 181 ~k~g---I~~~Dv~~~ny~---~--G~lvDfs~~ 206 (207)
T PF13095_consen 181 HKLG---IVPRDVKPRNYR---G--GKLVDFSSS 206 (207)
T ss_pred HHCC---eeeccCcccccc---C--CEEEecccC
Confidence 9999 999999999986 3 389999864
No 490
>PRK05231 homoserine kinase; Provisional
Probab=97.53 E-value=0.0014 Score=70.34 Aligned_cols=139 Identities=16% Similarity=0.209 Sum_probs=77.2
Q ss_pred eeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhC-----CCCcEEEE-----eceecCCCceEEeec
Q 005343 400 RKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSM-----RHTNMVIL-----LGACPEYGCLVYEYM 469 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l-----~HpnIv~l-----~g~~~~~~~lV~Ey~ 469 (701)
+.|+.|....+|+....+..+++|++. . .....+..|+.++..| .-|.++.- +.......+++++|+
T Consensus 28 ~~l~~G~~n~~y~v~t~~g~~vLK~~~-~--~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l 104 (319)
T PRK05231 28 KGIAEGIENSNFFLTTTQGEYVLTLFE-R--LTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFL 104 (319)
T ss_pred chhccccccceEEEEeCCCcEEEEEec-c--CChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEec
Confidence 456677778999998777789999876 2 2234444555555554 34444431 111233457999999
Q ss_pred CCCChh-----------hHh---cccCC--------CCCCCh-HHHHH------------HHHH-HHHHHHHHhhc----
Q 005343 470 ENGSLE-----------DRL---FQKDN--------SPPIHW-SIRFK------------IAAE-IATALLFLHQN---- 509 (701)
Q Consensus 470 ~~gsL~-----------~~l---~~~~~--------~~~l~~-~~~~~------------i~~q-ia~aL~~LH~~---- 509 (701)
+|..+. ..| +.... ...+.| ..... .+.+ +...+..+...
T Consensus 105 ~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 184 (319)
T PRK05231 105 EGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPA 184 (319)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhcccccc
Confidence 886431 111 11000 001112 11111 1111 11122333211
Q ss_pred CCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 510 KPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 510 ~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
-|..+||+|+.|.|||++.+...-|+||+.+.
T Consensus 185 lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 185 LPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred CCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 23459999999999999977767899999875
No 491
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.50 E-value=0.00056 Score=72.42 Aligned_cols=141 Identities=16% Similarity=0.190 Sum_probs=85.4
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCc--EEEEece--------ecCCCceEEee
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTN--MVILLGA--------CPEYGCLVYEY 468 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~--------~~~~~~lV~Ey 468 (701)
.+.|..|....+|+...++..+++|+... .....+..|+.++..+.+.. +..++.. ..+..++||+|
T Consensus 19 i~~i~~G~~n~~y~v~~~~~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~ 95 (296)
T cd05153 19 FEGISAGIENTNYFVTTDSGRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEF 95 (296)
T ss_pred eecccCccccceEEEEeCCCcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEe
Confidence 45677787889999988777899998764 33456777888887774322 3333322 12334789999
Q ss_pred cCCCChhh-----------H---hccc----CCC----CCCChHHHH----------HHHHHHHHHHHHHhh----cCCC
Q 005343 469 MENGSLED-----------R---LFQK----DNS----PPIHWSIRF----------KIAAEIATALLFLHQ----NKPE 512 (701)
Q Consensus 469 ~~~gsL~~-----------~---l~~~----~~~----~~l~~~~~~----------~i~~qia~aL~~LH~----~~~~ 512 (701)
++|..+.. . ++.. ... ....|.... .....+..++.++.. .-+.
T Consensus 96 i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~ 175 (296)
T cd05153 96 LAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPR 175 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCC
Confidence 98866532 0 0100 000 011222110 011123344555543 1233
Q ss_pred CeeecCCCCCCeeEcCCCcEEEEeeccccc
Q 005343 513 PLVHRDLKPANILLDQNYVSKISDVGLARL 542 (701)
Q Consensus 513 ~iiHrDLKp~NILl~~~~~~KL~DFGla~~ 542 (701)
.++|+|+.|.|||++.++.+.|.||+.+..
T Consensus 176 ~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 176 GVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred cCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 499999999999999988889999998753
No 492
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.37 E-value=8.3e-05 Score=90.12 Aligned_cols=175 Identities=14% Similarity=0.054 Sum_probs=125.8
Q ss_pred EEEEEeCCCCCCCh-----HHHHHHHHHHHhCCCCcEEEEeceecC----CCceEEeecCCCChhhHhccc-CCCCCCCh
Q 005343 420 VAIKVLGPDISQGP-----RQFKQEVEILGSMRHTNMVILLGACPE----YGCLVYEYMENGSLEDRLFQK-DNSPPIHW 489 (701)
Q Consensus 420 vAiK~l~~~~~~~~-----~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~~gsL~~~l~~~-~~~~~l~~ 489 (701)
+.+++.+...-+.. +....|.+.++...|++++..+.-.++ ..+.+++|+.+|.+.+.+.+. ...+++..
T Consensus 1255 Fk~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~ 1334 (2724)
T KOG1826|consen 1255 FKFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDR 1334 (2724)
T ss_pred eEEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchh
Confidence 45666544332222 223455556667789998877655432 337899999999999988764 34445555
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CCCCeeecCCCCCCeeEcCCCcEEEEeeccccccCCCCCcccccccccccccCCCccC
Q 005343 490 SIRFKIAAEIATALLFLHQN--KPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSAADTITQYHMTTAAGTFCYID 567 (701)
Q Consensus 490 ~~~~~i~~qia~aL~~LH~~--~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~~~~~~~~~~~~~~~~gt~~Y~a 567 (701)
.-+.....+...+..-+|+. ++..-+|++||+.|.++..++.+|++++|+.+...+. .......++++.|+.
T Consensus 1335 ~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~------~sf~Gl~l~sp~~v~ 1408 (2724)
T KOG1826|consen 1335 SPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV------LSFFGLELCSPIYVL 1408 (2724)
T ss_pred chHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCch------HhhhhhhhCCHHHHH
Confidence 55554445546666665543 3345799999999999999999999999999843221 112356678889999
Q ss_pred cccccCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 005343 568 PEYQQTGMLGVKSDLYSLGVVLLQLITARPAMG 600 (701)
Q Consensus 568 PE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 600 (701)
|++...-.++.++|+|..|+-+|.+--|.++|-
T Consensus 1409 qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi 1441 (2724)
T KOG1826|consen 1409 QLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFI 1441 (2724)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHH
Confidence 999998899999999999999999999988873
No 493
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.37 E-value=0.0018 Score=64.56 Aligned_cols=132 Identities=25% Similarity=0.349 Sum_probs=89.2
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCC----------------CCChHHHHHHHHHHHhCC------CCcEEEEec
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDI----------------SQGPRQFKQEVEILGSMR------HTNMVILLG 456 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~----------------~~~~~~~~~Ei~il~~l~------HpnIv~l~g 456 (701)
...||+|+.-.||.-- .+....||+..... ....++..+|+.-...+. +.+|..++|
T Consensus 6 ~~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred CcccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 3579999999998522 34457889987765 223456777877776666 778889999
Q ss_pred eecCCC--ceEEeecCC------CChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCCCCeeecCCCCCCeeEcC
Q 005343 457 ACPEYG--CLVYEYMEN------GSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKPEPLVHRDLKPANILLDQ 528 (701)
Q Consensus 457 ~~~~~~--~lV~Ey~~~------gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~~~iiHrDLKp~NILl~~ 528 (701)
+...+. .+|+|.+.+ -+|.+++... .++. . +...+-.-..||-.++ |+.+||+|.||++..
T Consensus 85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~----~~~~-~---~~~~L~~f~~~l~~~~---Iv~~dl~~~NIv~~~ 153 (199)
T PF10707_consen 85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEG----GLTE-E---LRQALDEFKRYLLDHH---IVIRDLNPHNIVVQR 153 (199)
T ss_pred EEecCCceEEEEEEEECCCCCcCccHHHHHHcC----CccH-H---HHHHHHHHHHHHHHcC---CeecCCCcccEEEEe
Confidence 986544 688887642 3577777322 3444 2 3334445556777778 999999999999953
Q ss_pred C---C-cEEEEe-eccccc
Q 005343 529 N---Y-VSKISD-VGLARL 542 (701)
Q Consensus 529 ~---~-~~KL~D-FGla~~ 542 (701)
+ . .+.|.| ||-..+
T Consensus 154 ~~~~~~~lvlIDG~G~~~~ 172 (199)
T PF10707_consen 154 RDSGEFRLVLIDGLGEKEL 172 (199)
T ss_pred cCCCceEEEEEeCCCCccc
Confidence 2 2 567777 565443
No 494
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.32 E-value=0.0037 Score=66.73 Aligned_cols=141 Identities=17% Similarity=0.227 Sum_probs=81.9
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCc--EEEEecee--------cCCCceEEee
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTN--MVILLGAC--------PEYGCLVYEY 468 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~~--------~~~~~lV~Ey 468 (701)
...++.|....+|+...++..+++|+.... .....+..|++++..|.... +..++... .+..+++|+|
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~--~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~ 104 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKR--VKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEF 104 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCC--CCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEe
Confidence 456777777899998877667889987653 22445667777777763222 22322221 2234789999
Q ss_pred cCCCChhh-----------H---hcccCCC--C-------CCChHHHH------------HHHHHHHHHHHHHhh----c
Q 005343 469 MENGSLED-----------R---LFQKDNS--P-------PIHWSIRF------------KIAAEIATALLFLHQ----N 509 (701)
Q Consensus 469 ~~~gsL~~-----------~---l~~~~~~--~-------~l~~~~~~------------~i~~qia~aL~~LH~----~ 509 (701)
++|..+.. . ++..... . .-.|.... .....+...+.+|.. .
T Consensus 105 i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~ 184 (307)
T TIGR00938 105 LQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRD 184 (307)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhc
Confidence 98854321 1 1110000 0 01111110 001123344555543 2
Q ss_pred CCCCeeecCCCCCCeeEcCCCcEEEEeecccc
Q 005343 510 KPEPLVHRDLKPANILLDQNYVSKISDVGLAR 541 (701)
Q Consensus 510 ~~~~iiHrDLKp~NILl~~~~~~KL~DFGla~ 541 (701)
-+..++|+|+.+.||+++.++.+.|.||+.+.
T Consensus 185 ~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 185 LPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred CCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 23459999999999999998877999999874
No 495
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.29 E-value=0.0016 Score=69.19 Aligned_cols=140 Identities=23% Similarity=0.303 Sum_probs=82.7
Q ss_pred eeeeecCceeEEEEEECC--------ceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEE-EEeceecCCCceEEeecC
Q 005343 400 RKIGEGGYGPVYKAQLDH--------TSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMV-ILLGACPEYGCLVYEYME 470 (701)
Q Consensus 400 ~~IG~G~fg~Vyk~~~~~--------~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv-~l~g~~~~~~~lV~Ey~~ 470 (701)
+.|..|-...||+....+ ..+++|+..... .......+|..++..+....+. ++++++. ..+|+||++
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~--~~~v~e~i~ 80 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFP--NGRIEEFIP 80 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeC--CCchhheeC
Confidence 456666677999988753 578999976543 2234567888888887533332 4455553 357899998
Q ss_pred CCChhhHh-----------------cccCCCC------CCC--hHHHHH--------------------------HHHHH
Q 005343 471 NGSLEDRL-----------------FQKDNSP------PIH--WSIRFK--------------------------IAAEI 499 (701)
Q Consensus 471 ~gsL~~~l-----------------~~~~~~~------~l~--~~~~~~--------------------------i~~qi 499 (701)
|..+.... +...... ..+ |..... +...+
T Consensus 81 G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (302)
T cd05156 81 SRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDE 160 (302)
T ss_pred CCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHH
Confidence 87664311 1111100 010 111111 11122
Q ss_pred HHHHHHHhh------cCCCCeeecCCCCCCeeEcCC----CcEEEEeeccccc
Q 005343 500 ATALLFLHQ------NKPEPLVHRDLKPANILLDQN----YVSKISDVGLARL 542 (701)
Q Consensus 500 a~aL~~LH~------~~~~~iiHrDLKp~NILl~~~----~~~KL~DFGla~~ 542 (701)
...+.+|-. ..+..++|+|+.|.|||++.+ +.+.|+||..|..
T Consensus 161 ~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 161 AKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 223444432 134458999999999999974 8899999998753
No 496
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.06 E-value=0.0031 Score=69.26 Aligned_cols=80 Identities=19% Similarity=0.145 Sum_probs=56.9
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCCCCC-------CChHHHHHHHHHHHhCC---CCcEEEEeceecCCCceEEee
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGPDIS-------QGPRQFKQEVEILGSMR---HTNMVILLGACPEYGCLVYEY 468 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~~~~-------~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~~~~lV~Ey 468 (701)
.+.||.|-...||+....+..++||.-..... ........|.+.|..+. ..++.+++.++.+..+++|||
T Consensus 37 ~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~ 116 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRY 116 (418)
T ss_pred EEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEee
Confidence 56789999999999988777799997542211 13344455677776664 246778999999999999999
Q ss_pred cCC--CChhhHh
Q 005343 469 MEN--GSLEDRL 478 (701)
Q Consensus 469 ~~~--gsL~~~l 478 (701)
+++ ..+.+.+
T Consensus 117 L~~~~~ilr~~L 128 (418)
T PLN02756 117 LEPPHIILRKGL 128 (418)
T ss_pred cCCcceehhhhh
Confidence 976 2444433
No 497
>PLN02236 choline kinase
Probab=96.99 E-value=0.0068 Score=65.86 Aligned_cols=142 Identities=18% Similarity=0.224 Sum_probs=81.8
Q ss_pred eeeeeecCceeEEEEEEC------CceEEEEEeCCCCCCChHHHHHHHHHHHhCCCCcEE-EEeceecCCCceEEeecCC
Q 005343 399 SRKIGEGGYGPVYKAQLD------HTSVAIKVLGPDISQGPRQFKQEVEILGSMRHTNMV-ILLGACPEYGCLVYEYMEN 471 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~------~~~vAiK~l~~~~~~~~~~~~~Ei~il~~l~HpnIv-~l~g~~~~~~~lV~Ey~~~ 471 (701)
...|-.|-...+|++... +..|++|+.......... -.+|..++..+..-++- ++++.+... .|++|+++
T Consensus 41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~g--~v~efi~g 117 (344)
T PLN02236 41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPNG--RVEEFIHA 117 (344)
T ss_pred EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECCc--eEEEeeCC
Confidence 345555778899998753 246899987665322222 37788888888543333 445655433 78999987
Q ss_pred CChhhH-----------------hcccCC-C-C-CCChHHHHHHHHHH-----------------HHHHHHH----hh-c
Q 005343 472 GSLEDR-----------------LFQKDN-S-P-PIHWSIRFKIAAEI-----------------ATALLFL----HQ-N 509 (701)
Q Consensus 472 gsL~~~-----------------l~~~~~-~-~-~l~~~~~~~i~~qi-----------------a~aL~~L----H~-~ 509 (701)
.+|... ++.... . . +..+.....+..++ ...+..| .. .
T Consensus 118 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~~ 197 (344)
T PLN02236 118 RTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGDD 197 (344)
T ss_pred CCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhcccC
Confidence 665321 111110 0 0 11223332332111 1112222 21 1
Q ss_pred CCCCeeecCCCCCCeeEcC-CCcEEEEeecccccc
Q 005343 510 KPEPLVHRDLKPANILLDQ-NYVSKISDVGLARLV 543 (701)
Q Consensus 510 ~~~~iiHrDLKp~NILl~~-~~~~KL~DFGla~~~ 543 (701)
.+..++|+|+++.|||+++ ++.+.|+||..|.+-
T Consensus 198 ~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~~ 232 (344)
T PLN02236 198 QEIGFCHNDLQYGNIMIDEETRAITIIDYEYASYN 232 (344)
T ss_pred CCceEEeCCCCcCcEEEeCCCCcEEEEeehhcccc
Confidence 2234899999999999986 578999999988643
No 498
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.95 E-value=0.0083 Score=63.97 Aligned_cols=146 Identities=21% Similarity=0.287 Sum_probs=81.9
Q ss_pred eeeeeecCceeEEEEEECCceEEEEEeCC--CCCCChHHHHHHHHHHHhCCC--CcEEEEeceecCCC----ceEEeecC
Q 005343 399 SRKIGEGGYGPVYKAQLDHTSVAIKVLGP--DISQGPRQFKQEVEILGSMRH--TNMVILLGACPEYG----CLVYEYME 470 (701)
Q Consensus 399 ~~~IG~G~fg~Vyk~~~~~~~vAiK~l~~--~~~~~~~~~~~Ei~il~~l~H--pnIv~l~g~~~~~~----~lV~Ey~~ 470 (701)
.+.+-.|--..+|.....++.+++. ... ..........+|..+|+.+.- .-+-..++.|.+.. +.||+|++
T Consensus 30 v~~~~~G~sn~t~~~~~~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~ve 108 (321)
T COG3173 30 VEEISGGWSNDTFRLGDTGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVE 108 (321)
T ss_pred eeeccCCcccceEEEecCCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEec
Confidence 3344333333555555556677777 321 112334457888888888743 22345577776655 89999998
Q ss_pred CCChhhHhcccCCC-----------------------CC------CChHHHHHHHHH--------------HHHHHHHHh
Q 005343 471 NGSLEDRLFQKDNS-----------------------PP------IHWSIRFKIAAE--------------IATALLFLH 507 (701)
Q Consensus 471 ~gsL~~~l~~~~~~-----------------------~~------l~~~~~~~i~~q--------------ia~aL~~LH 507 (701)
|..+.+.+...... +. ....+..++..+ ...-..||+
T Consensus 109 Ge~~~~~~~~~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~ 188 (321)
T COG3173 109 GEVVWSALPPESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLE 188 (321)
T ss_pred ceeccCcCCcccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHH
Confidence 84333222110000 00 000000111111 122244454
Q ss_pred hcCC-----CCeeecCCCCCCeeEcCCCcEEEEeeccccccCC
Q 005343 508 QNKP-----EPLVHRDLKPANILLDQNYVSKISDVGLARLVPP 545 (701)
Q Consensus 508 ~~~~-----~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~~~ 545 (701)
.+.| .+++|+|+.+.||+++.++-+=|.||+++.+-+|
T Consensus 189 ~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGDP 231 (321)
T COG3173 189 ANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLGDP 231 (321)
T ss_pred hcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccCCc
Confidence 4433 4589999999999999998899999999987554
No 499
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.80 E-value=0.0049 Score=66.63 Aligned_cols=78 Identities=14% Similarity=0.106 Sum_probs=52.5
Q ss_pred eeeecCceeEEEEEECC--ceEEEEEeCC-------CCCCChHHHHHHHHHHHhCC--CC-cEEEEeceecCCCceEEee
Q 005343 401 KIGEGGYGPVYKAQLDH--TSVAIKVLGP-------DISQGPRQFKQEVEILGSMR--HT-NMVILLGACPEYGCLVYEY 468 (701)
Q Consensus 401 ~IG~G~fg~Vyk~~~~~--~~vAiK~l~~-------~~~~~~~~~~~Ei~il~~l~--Hp-nIv~l~g~~~~~~~lV~Ey 468 (701)
.||.|-...||++...+ +.|+||.-.. +.........-|.+.|.... -| .+.++|.+-++...+|||+
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEd 81 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMED 81 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhh
Confidence 47889999999999864 4699996432 11233455667888887663 34 4556777777777899999
Q ss_pred cCCC-ChhhHh
Q 005343 469 MENG-SLEDRL 478 (701)
Q Consensus 469 ~~~g-sL~~~l 478 (701)
++.. .|.+.|
T Consensus 82 L~~~~ilR~~L 92 (370)
T TIGR01767 82 LSHHKIARKGL 92 (370)
T ss_pred CccchHHHHHH
Confidence 9543 343444
No 500
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.66 E-value=0.0015 Score=68.45 Aligned_cols=150 Identities=13% Similarity=0.175 Sum_probs=100.4
Q ss_pred cccccCHHHHHHhhc---CceeeeeeeecCceeEEEEEE-CCceEEEEEeCCCCC------------------CC----h
Q 005343 380 RYRKYTIEEIEAATD---YFSISRKIGEGGYGPVYKAQL-DHTSVAIKVLGPDIS------------------QG----P 433 (701)
Q Consensus 380 ~~~~~~~~ei~~~~~---~f~~~~~IG~G~fg~Vyk~~~-~~~~vAiK~l~~~~~------------------~~----~ 433 (701)
.|..|.+--+....+ -+.+.+.||-|.-+.||.+-+ .+++.++|+.+..-. .+ .
T Consensus 75 Ty~GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSR 154 (465)
T KOG2268|consen 75 TYAGYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSR 154 (465)
T ss_pred eeccchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHH
Confidence 455565555555444 478899999999999999988 488888886432210 00 0
Q ss_pred HHHHHHHHHHHhCC-CCc-EEEEeceecCCCceEEeecCCCChhhHhcccCCCCCCChHHHHHHHHHHHHHHHHHhhcCC
Q 005343 434 RQFKQEVEILGSMR-HTN-MVILLGACPEYGCLVYEYMENGSLEDRLFQKDNSPPIHWSIRFKIAAEIATALLFLHQNKP 511 (701)
Q Consensus 434 ~~~~~Ei~il~~l~-Hpn-Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~l~~~~~~~i~~qia~aL~~LH~~~~ 511 (701)
-...+|+..|+.|. |-. +.+.++. ...|+|||++.|-.|...-. ..... .+...+..-+.-|..+|
T Consensus 155 laa~kEfafmkaL~e~gfpVPkpiD~--~RH~Vvmelv~g~Pl~~v~~------v~d~~---~ly~~lm~~Iv~la~~G- 222 (465)
T KOG2268|consen 155 LAATKEFAFMKALYERGFPVPKPIDH--NRHCVVMELVDGYPLRQVRH------VEDPP---TLYDDLMGLIVRLANHG- 222 (465)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCcccc--cceeeHHHhhcccceeeeee------cCChH---HHHHHHHHHHHHHHHcC-
Confidence 12466777777774 222 2222222 23489999998877754321 11222 34555666677788889
Q ss_pred CCeeecCCCCCCeeEcCCCcEEEEeecccccc
Q 005343 512 EPLVHRDLKPANILLDQNYVSKISDVGLARLV 543 (701)
Q Consensus 512 ~~iiHrDLKp~NILl~~~~~~KL~DFGla~~~ 543 (701)
+||+|..-=||+++.++.++++||-.+...
T Consensus 223 --lIHgDFNEFNimv~dd~~i~vIDFPQmvS~ 252 (465)
T KOG2268|consen 223 --LIHGDFNEFNIMVKDDDKIVVIDFPQMVST 252 (465)
T ss_pred --ceecccchheeEEecCCCEEEeechHhhcc
Confidence 999999999999999999999999766543
Done!