Query 005346
Match_columns 701
No_of_seqs 266 out of 1431
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 22:45:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005346.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005346hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2yua_A Williams-beuren syndrom 99.6 4.2E-16 1.4E-20 137.6 7.4 69 90-158 16-85 (99)
2 2dn9_A DNAJ homolog subfamily 99.6 2.8E-16 9.5E-21 132.6 5.6 69 90-158 6-75 (79)
3 1wjz_A 1700030A21RIK protein; 99.6 1.1E-15 3.7E-20 132.7 8.9 69 90-158 15-90 (94)
4 1hdj_A Human HSP40, HDJ-1; mol 99.6 6.5E-16 2.2E-20 130.0 6.9 69 90-159 2-71 (77)
5 2och_A Hypothetical protein DN 99.6 5.1E-16 1.7E-20 129.5 6.0 68 86-156 3-71 (73)
6 2ej7_A HCG3 gene; HCG3 protein 99.6 1.1E-15 3.6E-20 129.9 7.9 68 91-158 9-78 (82)
7 2ctp_A DNAJ homolog subfamily 99.6 1.4E-15 4.8E-20 128.2 7.9 69 90-159 6-75 (78)
8 2cug_A Mkiaa0962 protein; DNAJ 99.6 1.6E-15 5.4E-20 131.1 7.6 70 88-158 14-84 (88)
9 2ctq_A DNAJ homolog subfamily 99.6 8.7E-16 3E-20 138.5 5.5 70 90-159 19-89 (112)
10 1bq0_A DNAJ, HSP40; chaperone, 99.6 9.7E-16 3.3E-20 136.0 4.9 70 90-159 2-72 (103)
11 2ctr_A DNAJ homolog subfamily 99.6 2.3E-15 7.8E-20 130.1 6.1 67 90-157 6-73 (88)
12 2dmx_A DNAJ homolog subfamily 99.5 2.8E-15 9.5E-20 130.2 5.6 69 91-159 9-79 (92)
13 2ctw_A DNAJ homolog subfamily 99.5 3.6E-15 1.2E-19 134.0 6.4 67 90-156 16-83 (109)
14 2lgw_A DNAJ homolog subfamily 99.5 3E-15 1E-19 132.9 5.7 70 91-160 2-73 (99)
15 2o37_A Protein SIS1; HSP40, J- 99.5 3.9E-15 1.3E-19 129.8 5.5 70 86-158 3-73 (92)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.5 7.6E-15 2.6E-19 131.3 5.3 72 87-158 11-87 (109)
17 3hho_A CO-chaperone protein HS 99.5 1.1E-13 3.8E-18 134.0 13.6 68 90-157 3-78 (174)
18 3apq_A DNAJ homolog subfamily 99.5 2E-14 6.7E-19 138.5 5.5 69 91-159 2-71 (210)
19 2l6l_A DNAJ homolog subfamily 99.4 2.8E-14 9.7E-19 134.7 4.1 67 91-157 10-83 (155)
20 1fpo_A HSC20, chaperone protei 99.4 1.1E-12 3.9E-17 126.7 14.8 66 92-157 2-75 (171)
21 2ys8_A RAB-related GTP-binding 99.4 1.5E-13 5E-18 119.7 3.5 62 89-151 25-87 (90)
22 3lz8_A Putative chaperone DNAJ 99.3 1.1E-13 3.7E-18 146.0 0.0 65 91-156 28-93 (329)
23 1gh6_A Large T antigen; tumor 99.3 8.5E-14 2.9E-18 126.9 -0.9 61 91-155 8-71 (114)
24 3bvo_A CO-chaperone protein HS 99.3 1.9E-12 6.6E-17 128.7 8.1 67 91-157 43-117 (207)
25 2pf4_E Small T antigen; PP2A, 99.3 2.7E-13 9.1E-18 132.1 0.1 63 91-157 11-76 (174)
26 1faf_A Large T antigen; J doma 99.3 7.6E-13 2.6E-17 113.0 2.1 59 91-153 11-72 (79)
27 1n4c_A Auxilin; four helix bun 99.2 7.4E-13 2.5E-17 129.8 0.6 62 91-152 117-182 (182)
28 3uo3_A J-type CO-chaperone JAC 99.2 2.1E-12 7.1E-17 126.1 3.3 65 90-157 10-82 (181)
29 1iur_A KIAA0730 protein; DNAJ 99.2 1.3E-12 4.5E-17 114.1 1.4 59 91-149 16-76 (88)
30 3apo_A DNAJ homolog subfamily 99.2 1.9E-12 6.4E-17 147.0 0.5 71 89-159 19-90 (780)
31 2guz_A Mitochondrial import in 99.2 4.4E-12 1.5E-16 106.0 1.5 55 91-149 14-70 (71)
32 2qwo_B Putative tyrosine-prote 99.2 3.9E-12 1.3E-16 112.4 1.1 55 91-145 33-91 (92)
33 3ag7_A Putative uncharacterize 99.2 5.8E-12 2E-16 113.4 1.5 56 91-147 41-104 (106)
34 2y4t_A DNAJ homolog subfamily 98.6 1.6E-08 5.4E-13 102.6 4.8 65 91-155 382-450 (450)
35 2guz_B Mitochondrial import in 98.1 1.6E-06 5.4E-11 72.2 3.6 48 93-144 6-57 (65)
36 2pzi_A Probable serine/threoni 89.6 0.15 5.3E-06 57.2 3.1 46 90-142 628-675 (681)
37 3ma5_A Tetratricopeptide repea 75.7 24 0.00083 28.7 10.1 77 179-271 16-92 (100)
38 3gw4_A Uncharacterized protein 74.7 16 0.00056 32.0 9.4 84 179-272 116-199 (203)
39 2yhc_A BAMD, UPF0169 lipoprote 69.4 71 0.0024 29.5 19.8 196 179-429 13-208 (225)
40 2kat_A Uncharacterized protein 55.7 81 0.0028 25.5 10.2 77 179-271 28-104 (115)
41 4a1s_A PINS, partner of inscut 55.6 1.5E+02 0.0051 29.1 13.0 64 179-250 57-120 (411)
42 2xcb_A PCRH, regulatory protei 54.5 50 0.0017 28.2 8.3 78 178-270 60-137 (142)
43 3qww_A SET and MYND domain-con 53.0 66 0.0023 34.7 10.6 81 179-268 349-432 (433)
44 3qwp_A SET and MYND domain-con 52.1 61 0.0021 34.7 10.1 64 179-249 338-404 (429)
45 2vgx_A Chaperone SYCD; alterna 46.6 83 0.0028 27.5 8.6 78 178-270 63-140 (148)
46 3ro3_A PINS homolog, G-protein 46.2 40 0.0014 27.5 6.1 66 179-250 98-163 (164)
47 3upv_A Heat shock protein STI1 45.4 1.2E+02 0.0042 24.6 9.3 79 179-269 47-125 (126)
48 3ro3_A PINS homolog, G-protein 45.4 1.2E+02 0.0041 24.5 9.4 64 179-250 58-123 (164)
49 3ma5_A Tetratricopeptide repea 42.6 31 0.0011 28.0 4.8 44 371-429 22-65 (100)
50 2v5f_A Prolyl 4-hydroxylase su 40.8 81 0.0028 26.2 7.2 34 214-249 5-38 (104)
51 3gw4_A Uncharacterized protein 39.2 1.2E+02 0.0043 26.2 8.5 65 179-250 75-141 (203)
52 3n71_A Histone lysine methyltr 37.6 1.3E+02 0.0046 32.8 10.2 64 179-249 360-426 (490)
53 2xev_A YBGF; tetratricopeptide 36.1 1.3E+02 0.0044 24.2 7.6 58 179-245 48-105 (129)
54 3k9i_A BH0479 protein; putativ 35.1 1.2E+02 0.0042 24.7 7.4 56 178-245 35-90 (117)
55 4a1s_A PINS, partner of inscut 34.9 3.3E+02 0.011 26.6 14.1 57 186-250 199-257 (411)
56 3k9i_A BH0479 protein; putativ 34.7 50 0.0017 27.1 4.9 44 371-429 42-85 (117)
57 3mkr_A Coatomer subunit epsilo 34.6 2.5E+02 0.0084 27.5 10.7 45 370-429 180-224 (291)
58 2xcb_A PCRH, regulatory protei 33.4 52 0.0018 28.1 5.0 44 371-429 67-110 (142)
59 2xev_A YBGF; tetratricopeptide 32.7 1.6E+02 0.0054 23.7 7.6 58 179-245 11-68 (129)
60 2l6j_A TPR repeat-containing p 32.5 79 0.0027 24.7 5.6 44 371-429 19-62 (111)
61 4gcn_A Protein STI-1; structur 31.7 1.7E+02 0.0059 24.6 8.0 60 179-245 51-112 (127)
62 2yhc_A BAMD, UPF0169 lipoprote 30.9 3.1E+02 0.01 25.1 10.2 131 106-245 21-176 (225)
63 2lni_A Stress-induced-phosphop 30.8 1.1E+02 0.0038 24.3 6.3 45 370-429 64-108 (133)
64 3sf4_A G-protein-signaling mod 30.5 2.1E+02 0.0072 27.6 9.3 19 232-250 323-341 (406)
65 2kat_A Uncharacterized protein 29.2 69 0.0023 26.0 4.8 56 352-429 22-77 (115)
66 1hz4_A MALT regulatory protein 28.6 3E+02 0.01 26.8 10.1 67 179-251 262-328 (373)
67 2kc7_A BFR218_protein; tetratr 27.7 83 0.0028 24.5 4.9 43 372-429 16-59 (99)
68 2vgx_A Chaperone SYCD; alterna 27.3 74 0.0025 27.9 5.0 44 371-429 70-113 (148)
69 1pc2_A Mitochondria fission pr 27.2 1.3E+02 0.0043 28.5 6.7 64 349-429 32-95 (152)
70 3sz7_A HSC70 cochaperone (SGT) 26.7 78 0.0027 27.4 5.0 44 371-429 26-69 (164)
71 1na3_A Designed protein CTPR2; 25.9 1E+02 0.0035 23.1 5.0 44 371-429 24-67 (91)
72 3gyz_A Chaperone protein IPGC; 25.5 69 0.0023 28.9 4.5 44 371-429 85-128 (151)
73 3upv_A Heat shock protein STI1 25.0 95 0.0033 25.4 5.0 56 352-429 41-96 (126)
74 3gyz_A Chaperone protein IPGC; 24.7 72 0.0025 28.7 4.5 57 351-429 38-94 (151)
75 3ro2_A PINS homolog, G-protein 24.6 4.1E+02 0.014 24.3 12.8 64 179-250 14-77 (338)
76 3sz7_A HSC70 cochaperone (SGT) 23.8 95 0.0033 26.8 5.0 56 352-429 48-103 (164)
77 2dba_A Smooth muscle cell asso 23.1 1.1E+02 0.0039 24.9 5.1 44 371-429 80-123 (148)
78 2lni_A Stress-induced-phosphop 22.9 80 0.0027 25.2 4.0 43 372-429 32-74 (133)
79 1na0_A Designed protein CTPR3; 22.8 1.2E+02 0.0041 23.5 5.0 44 371-429 24-67 (125)
80 1hxi_A PEX5, peroxisome target 22.1 1.8E+02 0.0061 24.4 6.3 56 352-429 20-75 (121)
81 1elr_A TPR2A-domain of HOP; HO 21.9 1.3E+02 0.0045 23.6 5.1 44 371-429 19-62 (131)
82 1elw_A TPR1-domain of HOP; HOP 21.8 1.3E+02 0.0044 23.2 4.9 44 371-429 19-62 (118)
83 4gyw_A UDP-N-acetylglucosamine 21.7 5.6E+02 0.019 29.2 12.0 111 105-245 25-140 (723)
84 4gco_A Protein STI-1; structur 21.0 3E+02 0.01 23.2 7.5 68 179-264 56-123 (126)
85 1hxi_A PEX5, peroxisome target 21.0 3E+02 0.01 22.9 7.5 56 178-245 25-80 (121)
86 2qfc_A PLCR protein; TPR, HTH, 21.0 2.1E+02 0.007 27.4 7.2 76 179-266 205-283 (293)
87 2dba_A Smooth muscle cell asso 20.7 1.9E+02 0.0064 23.5 6.0 47 371-429 43-89 (148)
88 4eqf_A PEX5-related protein; a 20.3 5.8E+02 0.02 24.5 18.4 59 175-245 70-128 (365)
89 1qqe_A Vesicular transport pro 20.1 4.5E+02 0.016 25.2 9.5 65 178-250 45-111 (292)
90 3iqc_A FLIS, flagellar protein 20.0 1.9E+02 0.0066 26.5 6.3 67 213-282 35-101 (131)
No 1
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=4.2e-16 Score=137.59 Aligned_cols=69 Identities=23% Similarity=0.314 Sum_probs=62.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
..|||+||||+++|+.++||+|||+++++ |||++...+.+..+|+.|++||+||+||.+|+.||..+..
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 85 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLS 85 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCC
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccc
Confidence 35999999999999999999999999986 7999876666788999999999999999999999998754
No 2
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=2.8e-16 Score=132.62 Aligned_cols=69 Identities=23% Similarity=0.298 Sum_probs=62.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.+..+|+.|++||++|+||.+|+.||..+..
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 46999999999999999999999999886 7999876556788999999999999999999999988653
No 3
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.61 E-value=1.1e-15 Score=132.70 Aligned_cols=69 Identities=17% Similarity=0.296 Sum_probs=61.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCC------hHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFS------PDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s------~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
..|||+||||+++|+.+|||+|||+++++ |||++.. .+.+.++|+.|++||+||+||.+|+.||..+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~ 90 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRSG 90 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSCC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHccC
Confidence 46999999999999999999999999987 7999653 145678999999999999999999999998864
No 4
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.61 E-value=6.5e-16 Score=129.96 Aligned_cols=69 Identities=20% Similarity=0.344 Sum_probs=61.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
..|||+||||+++|+.++||+|||+++++ |||++.+. .+..+|+.|++||++|+||.+|+.||..+.++
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP-GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT-THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 46999999999999999999999999987 79997654 35678999999999999999999999876543
No 5
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.61 E-value=5.1e-16 Score=129.54 Aligned_cols=68 Identities=21% Similarity=0.342 Sum_probs=59.4
Q ss_pred CCCcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcc
Q 005346 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (701)
Q Consensus 86 ~m~iPlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L 156 (701)
.|....|||+||||+++|+.++||+|||+++++ |||++.+. ..+|+.|++||+||+||.+|+.||...
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~---~~~f~~i~~Ay~~L~d~~~R~~YD~~g 71 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG---AEQFKQISQAYEVLSDEKKRQIYDQGG 71 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC---HHHHHHHHHHHHHHTSHHHHHHHHHTC
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH---HHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 466778999999999999999999999999886 79997653 468999999999999999999999875
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=1.1e-15 Score=129.88 Aligned_cols=68 Identities=22% Similarity=0.335 Sum_probs=61.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~-eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
.|||+||||+++++.++||+|||+++++ |||++.+. +.+..+|+.|++||++|+||.+|+.||.....
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 5999999999999999999999999987 79997654 46778999999999999999999999987643
No 7
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.4e-15 Score=128.19 Aligned_cols=69 Identities=22% Similarity=0.364 Sum_probs=61.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
..|||+||||+++|+.++||+|||+++++ |||++..+ ....+|+.|++||++|+||.+|+.||..+..+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAP-GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSH-HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46999999999999999999999999987 79997654 45789999999999999999999999887543
No 8
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.59 E-value=1.6e-15 Score=131.12 Aligned_cols=70 Identities=23% Similarity=0.330 Sum_probs=62.1
Q ss_pred CcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 88 SIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 88 ~iPlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
....|||+||||+++|+.++||+|||+++++ |||++.+. ...++|+.|++||++|+||.+|+.||..+..
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDP-GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCST-THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCh-hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 3457999999999999999999999999887 79997653 4578999999999999999999999987643
No 9
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=8.7e-16 Score=138.49 Aligned_cols=70 Identities=24% Similarity=0.274 Sum_probs=63.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
..|||+||||+++|+.++||+|||+++++ |||++...+.+..+|+.|++||+||+||.+|+.||..+..+
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~ 89 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQ 89 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhc
Confidence 46999999999999999999999999987 79998755567889999999999999999999999987643
No 10
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.57 E-value=9.7e-16 Score=135.97 Aligned_cols=70 Identities=23% Similarity=0.310 Sum_probs=63.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
..|||+||||+++|+.++||+|||+++++ |||++.+.+.++++|+.|++||+||+||.+|+.||..+.+.
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 72 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAA 72 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhh
Confidence 36999999999999999999999999988 79998765566789999999999999999999999987654
No 11
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=2.3e-15 Score=130.11 Aligned_cols=67 Identities=24% Similarity=0.301 Sum_probs=60.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
..|||+||||+++|+.++||+|||+++++ |||++.+ +.+.++|+.|++||++|+||.+|+.||..+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~ 73 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS-PDAEAKFREIAEAYETLSDANRRKEYDTLGH 73 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS-HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC-hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCc
Confidence 35899999999999999999999999987 7999875 4567899999999999999999999998754
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=2.8e-15 Score=130.23 Aligned_cols=69 Identities=19% Similarity=0.379 Sum_probs=61.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~-eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
.|||+||||+++++.++||+|||+++++ |||++... +.++++|+.|++||++|+||.+|+.||......
T Consensus 9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999999886 79997653 467889999999999999999999999986543
No 13
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.55 E-value=3.6e-15 Score=133.97 Aligned_cols=67 Identities=19% Similarity=0.281 Sum_probs=61.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcc
Q 005346 90 PIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (701)
Q Consensus 90 PlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L 156 (701)
..|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||+||+||.+|+.||...
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g 83 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYG 83 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhc
Confidence 46999999999999999999999999987 79998766667889999999999999999999999865
No 14
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.55 E-value=3e-15 Score=132.85 Aligned_cols=70 Identities=17% Similarity=0.261 Sum_probs=61.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhhHHHhhcccCCC
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSRREYNQGLADDH 160 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~-eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~~ 160 (701)
.|||+||||+++|+.++||+|||+++++ |||++.+. +.+.++|+.|++||++|+||.+|+.||..+.++.
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~ 73 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGL 73 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 5899999999999999999999999987 79997653 4577899999999999999999999999876543
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.54 E-value=3.9e-15 Score=129.80 Aligned_cols=70 Identities=17% Similarity=0.238 Sum_probs=61.1
Q ss_pred CCCcCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 86 HVSIPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 86 ~m~iPlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
.|....|||+||||+++|+.++||+|||+++++ |||++.... ++|+.|++||+||+||.+|+.||....+
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~---~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 73 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDT---EKFKEISEAFEILNDPQKREIYDQYGLE 73 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCH---HHHHHHHHHHHHHTSHHHHHHHHHHCHH
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChH---HHHHHHHHHHHHHCCHHHHHHHHHHCHH
Confidence 455678999999999999999999999999987 899975442 4899999999999999999999987543
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.51 E-value=7.6e-15 Score=131.28 Aligned_cols=72 Identities=19% Similarity=0.183 Sum_probs=63.7
Q ss_pred CCcCCCcccccCCCCCC-CHHHHHHHHHHHHhC-CCCCCCC---hHHHHHHHHHHHHHHHHcCCchhhHHHhhcccC
Q 005346 87 VSIPIDFYQALGAETHF-LGDGIRRAYEARISK-PPQYGFS---PDALISRRQILQAACETLANASSRREYNQGLAD 158 (701)
Q Consensus 87 m~iPlDyYeILGVs~~A-s~eEIKkAYRklal~-hPDk~~s---~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e 158 (701)
+....|||+||||+++| +.++||+|||+++++ |||++.+ .+.+..+|+.|++||++|+||.+|+.||..+..
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~~ 87 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDH 87 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhccC
Confidence 34457999999999999 999999999999887 7998765 355778999999999999999999999998753
No 17
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.51 E-value=1.1e-13 Score=133.96 Aligned_cols=68 Identities=18% Similarity=0.339 Sum_probs=60.1
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHH-----HHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 90 PIDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDA-----LISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 90 PlDyYeILGVs~~As--~eEIKkAYRklal~-hPDk~~s~ea-----a~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
+.|||+||||+++++ .++||+|||+++++ |||++.+... +..+|+.|++||+||+||.+|..||..+.
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 469999999999998 99999999999987 8998654322 56889999999999999999999999875
No 18
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.48 E-value=2e-14 Score=138.51 Aligned_cols=69 Identities=20% Similarity=0.252 Sum_probs=62.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
.|||+||||+++|+.++||+|||+++++ |||++...+.+.++|+.|++||++|+||.+|+.||....++
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 4899999999999999999999999987 89998655567889999999999999999999999987544
No 19
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.45 E-value=2.8e-14 Score=134.67 Aligned_cols=67 Identities=21% Similarity=0.338 Sum_probs=59.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh------HHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP------DALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~------eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
.|||+||||+++|+.++||+|||+++++ |||++.+. +.+.++|+.|++||+||+||.+|+.||..+.
T Consensus 10 ~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 10 KDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 5999999999999999999999999987 89987543 1356899999999999999999999998764
No 20
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.44 E-value=1.1e-12 Score=126.67 Aligned_cols=66 Identities=18% Similarity=0.281 Sum_probs=58.9
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 92 DFYQALGAETHF--LGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 92 DyYeILGVs~~A--s~eEIKkAYRklal~-hPDk~~s~e-----aa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
|||+||||++++ +.++||++||+++++ |||++.+.. .+..+|+.|++||+||+||.+|..||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 899999999999 999999999999886 899865432 245789999999999999999999999875
No 21
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.5e-13 Score=119.69 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=55.0
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHH
Q 005346 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRRE 151 (701)
Q Consensus 89 iPlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~ 151 (701)
-..|||+||||+++|+.+|||+|||+++++ |||++... ...++|+.|++||++|+||.+|+.
T Consensus 25 ~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 25 NSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP-GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp TCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT-THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred cCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-cHHHHHHHHHHHHHHHCCcccccC
Confidence 347999999999999999999999999987 89998654 356789999999999999998864
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.33 E-value=1.1e-13 Score=146.00 Aligned_cols=65 Identities=26% Similarity=0.291 Sum_probs=0.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcc
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGL 156 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L 156 (701)
.|||+||||+++||.+|||+|||+++++ |||++.+. .++++|+.|++||+||+||.+|+.||+..
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~ 93 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN-DAEAKFKDLAEAWEVLKDEQRRAEYDQLW 93 (329)
T ss_dssp -------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh-HHHHHHHHHHHHHHHhhhhhhhcccchhh
Confidence 6999999999999999999999999998 79987644 56789999999999999999999999864
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.33 E-value=8.5e-14 Score=126.94 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=55.9
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhc
Q 005346 91 IDFYQALGAETHFLG--DGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQG 155 (701)
Q Consensus 91 lDyYeILGVs~~As~--eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~ 155 (701)
.+||+||||+++|+. ++||+|||+++++ |||++.+ ..+|+.|++||+||+||.+|+.||..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~----~e~f~~I~~AYevL~d~~~R~~~~~~ 71 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD----EEKMKKMNTLYKKMEDGVKYAHQPDF 71 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT----TTTTHHHHHHHHHHHHHHHSCCSSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc----HHHHHHHHHHHHHHCCHHHHHHhhhc
Confidence 589999999999999 9999999999998 7999866 35799999999999999999999964
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.32 E-value=1.9e-12 Score=128.74 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=58.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChH-----HHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPD-----ALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 91 lDyYeILGVs~~--As~eEIKkAYRklal~-hPDk~~s~e-----aa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
.|||+||||+++ ++.++||++||+++++ |||++.+.. .+.++|+.|++||+||+||.+|+.||..+.
T Consensus 43 ~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 43 RDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp CCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 599999999997 6899999999999987 899875421 246789999999999999999999998764
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.29 E-value=2.7e-13 Score=132.11 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=54.9
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 91 IDFYQALGAETHFL--GDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 91 lDyYeILGVs~~As--~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
.|||+||||+++|+ .+|||+|||+++++ |||++.++ ++|+.|++||+||+||.+|+.||....
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999999 69999999999987 79997653 579999999999999999999999763
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.28 E-value=7.6e-13 Score=112.95 Aligned_cols=59 Identities=17% Similarity=0.054 Sum_probs=52.9
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHh
Q 005346 91 IDFYQALGAETH--FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYN 153 (701)
Q Consensus 91 lDyYeILGVs~~--As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD 153 (701)
.++|+||||+++ ++.++||+|||+++++ |||++.+ .++|+.|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~----~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS----HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC----HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC----HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 479999999999 9999999999999987 7999765 357999999999999999998754
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.25 E-value=7.4e-13 Score=129.83 Aligned_cols=62 Identities=11% Similarity=0.139 Sum_probs=55.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHHcCCchhhHHH
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLANASSRREY 152 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~e---aa~~RfqlI~eAYeVLSDP~~R~~Y 152 (701)
.|||+||||+++|+.++||+|||+++++ |||++.... .++.+|+.|++||+||+||.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 5899999999999999999999999986 899865432 2678999999999999999999887
No 28
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.24 E-value=2.1e-12 Score=126.12 Aligned_cols=65 Identities=18% Similarity=0.254 Sum_probs=57.7
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhccc
Q 005346 90 PIDFYQAL------GAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLA 157 (701)
Q Consensus 90 PlDyYeIL------GVs~-~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~ 157 (701)
+.|||+|| |+++ +++.++||+|||+++++ |||++.+ +..+|+.|++||+||+||.+|..||..+.
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~---a~~~f~~i~~AY~vL~dp~~R~~Yd~~l~ 82 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ---GSEQSSTLNQAYHTLKDPLRRSQYMLKLL 82 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS---CSSGGGSHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc---HHHHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 35999999 4665 89999999999999997 7999765 45689999999999999999999999883
No 29
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.23 E-value=1.3e-12 Score=114.10 Aligned_cols=59 Identities=10% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCCh-HHHHHHHHHHHHHHHHcCCchhh
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSP-DALISRRQILQAACETLANASSR 149 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~-eaa~~RfqlI~eAYeVLSDP~~R 149 (701)
.++|+||||+++|+.+|||+|||+++++ |||++.+. +.++++|+.|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 4799999999999999999999999987 79998754 45788999999999999998777
No 30
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.19 E-value=1.9e-12 Score=147.00 Aligned_cols=71 Identities=20% Similarity=0.232 Sum_probs=40.6
Q ss_pred cCCCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhhHHHhhcccCC
Q 005346 89 IPIDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSRREYNQGLADD 159 (701)
Q Consensus 89 iPlDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R~~YD~~L~e~ 159 (701)
...|||+||||+++|+.+|||+|||+++++ |||++...+.+..+|+.|++||++|+||.+|+.||....++
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC----
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 346999999999999999999999999987 79998666667889999999999999999999999976543
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.17 E-value=4.4e-12 Score=105.99 Aligned_cols=55 Identities=15% Similarity=0.113 Sum_probs=49.1
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcCCchhh
Q 005346 91 IDFYQALGAET-HFLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLANASSR 149 (701)
Q Consensus 91 lDyYeILGVs~-~As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLSDP~~R 149 (701)
.++|+||||++ +++.++||+|||+++++ |||++.+. .+|+.|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~----~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSP----FLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCH----HHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH----HHHHHHHHHHHHHhhhhhc
Confidence 48999999999 79999999999999987 89997554 3799999999999998765
No 32
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.17 E-value=3.9e-12 Score=112.37 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=48.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCCChH---HHHHHHHHHHHHHHHcCC
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGFSPD---ALISRRQILQAACETLAN 145 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~s~e---aa~~RfqlI~eAYeVLSD 145 (701)
.+||++|||++.||.+|||+|||+++++ |||++.+.+ .++.+|+.|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999986 799875432 478899999999999965
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.15 E-value=5.8e-12 Score=113.43 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=48.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHhC-CCCCCC----ChH---HHHHHHHHHHHHHHHcCCch
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARISK-PPQYGF----SPD---ALISRRQILQAACETLANAS 147 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal~-hPDk~~----s~e---aa~~RfqlI~eAYeVLSDP~ 147 (701)
.|||+|||++. ||.++||+|||+++++ |||++. +.+ .++.+|+.|++||+||+|+.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 58999999996 9999999999999987 899853 222 35789999999999999975
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.64 E-value=1.6e-08 Score=102.58 Aligned_cols=65 Identities=22% Similarity=0.289 Sum_probs=52.6
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHh-CCCCCCCCh---HHHHHHHHHHHHHHHHcCCchhhHHHhhc
Q 005346 91 IDFYQALGAETHFLGDGIRRAYEARIS-KPPQYGFSP---DALISRRQILQAACETLANASSRREYNQG 155 (701)
Q Consensus 91 lDyYeILGVs~~As~eEIKkAYRklal-~hPDk~~s~---eaa~~RfqlI~eAYeVLSDP~~R~~YD~~ 155 (701)
.+||.+||+.+.++.++|+++|+++++ .|||+..++ ..++.+|+.|.+||++|+||++|+.||.+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~g 450 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDDG 450 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC------
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccCC
Confidence 389999999999999999999999766 589987665 35678999999999999999999999964
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.10 E-value=1.6e-06 Score=72.16 Aligned_cols=48 Identities=19% Similarity=0.083 Sum_probs=40.9
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHhC-CCCCCCChHHHHHHHHHHHHHHHHcC
Q 005346 93 FYQALGAETH---FLGDGIRRAYEARISK-PPQYGFSPDALISRRQILQAACETLA 144 (701)
Q Consensus 93 yYeILGVs~~---As~eEIKkAYRklal~-hPDk~~s~eaa~~RfqlI~eAYeVLS 144 (701)
-|+||||+++ ++.++|+++||++... |||+|.|..- +..|++|+++|.
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl----~~ki~~Ake~l~ 57 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYL----QSKVYRAAERLK 57 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHH----HHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHH----HHHHHHHHHHHH
Confidence 4899999999 9999999999999775 7999988643 456899999985
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=89.60 E-value=0.15 Score=57.18 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=37.9
Q ss_pred CCCcccccCCCCCCCH--HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHH
Q 005346 90 PIDFYQALGAETHFLG--DGIRRAYEARISKPPQYGFSPDALISRRQILQAACET 142 (701)
Q Consensus 90 PlDyYeILGVs~~As~--eEIKkAYRklal~hPDk~~s~eaa~~RfqlI~eAYeV 142 (701)
..|||.+||++.+... .+|++|||++++..|+. ..|+.++..|+.|
T Consensus 628 ~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 628 KASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp CCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred CCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 3469999999777766 77999999999987664 3689999999876
No 37
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=75.70 E-value=24 Score=28.68 Aligned_cols=77 Identities=8% Similarity=0.076 Sum_probs=53.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
++.+.|+++++++.-+++++-... ..++.. .+|.-....+ +++.|...+++++++-...+ -...
T Consensus 16 ~~~~~g~~~~A~~~~~~al~~~p~---~~~a~~-------~lg~~~~~~g--~~~~A~~~~~~al~l~~~~~----~~~~ 79 (100)
T 3ma5_A 16 EHLKHDNASRALALFEELVETDPD---YVGTYY-------HLGKLYERLD--RTDDAIDTYAQGIEVAREEG----TQKD 79 (100)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHSTT---CTHHHH-------HHHHHHHHTT--CHHHHHHHHHHHHHHHHHHS----CHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCC---cHHHHH-------HHHHHHHHcC--CHHHHHHHHHHHHhhhhcCC----chhH
Confidence 567899999999999999874221 223333 3333333343 59999999999999988876 4666
Q ss_pred HHHHHHHhHhhCh
Q 005346 259 QAQIDETLEEINP 271 (701)
Q Consensus 259 q~eIe~~L~eL~P 271 (701)
..++...|.++-.
T Consensus 80 ~~~l~~~l~~~~~ 92 (100)
T 3ma5_A 80 LSELQDAKLKAEG 92 (100)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHccc
Confidence 7777777765543
No 38
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=74.70 E-value=16 Score=32.03 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=58.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
++.+.|++++++++-++.+.-....+. ....+.++..++.-.+..+ ++..|...+++++++.++.| -+..
T Consensus 116 ~~~~~g~~~~A~~~~~~al~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 185 (203)
T 3gw4_A 116 VALHFGDLAGARQEYEKSLVYAQQADD----QVAIACAFRGLGDLAQQEK--NLLEAQQHWLRARDIFAELE----DSEA 185 (203)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT----CHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHhccc----hHHHHHHHHHHHHHHHHCc--CHHHHHHHHHHHHHHHHHcC----CHHH
Confidence 556788999888888887753111111 1223444555666666664 59999999999999999987 6777
Q ss_pred HHHHHHHhHhhChh
Q 005346 259 QAQIDETLEEINPR 272 (701)
Q Consensus 259 q~eIe~~L~eL~Py 272 (701)
..++...+.++.|.
T Consensus 186 ~~~~~~~~~~~~~~ 199 (203)
T 3gw4_A 186 VNELMTRLNGLEHH 199 (203)
T ss_dssp HHHHHHHHHTTCC-
T ss_pred HHHHHhcccchhhc
Confidence 88888887777553
No 39
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=69.38 E-value=71 Score=29.50 Aligned_cols=196 Identities=11% Similarity=0.043 Sum_probs=104.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
.+.+.|+++++++.=+.+++.....+...+..+-+|.+|.. . .+|..|...+++.++ ....+...+..
T Consensus 13 ~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~-------~--~~~~~A~~~~~~~l~---~~P~~~~~~~a 80 (225)
T 2yhc_A 13 QKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYK-------N--ADLPLAQAAIDRFIR---LNPTHPNIDYV 80 (225)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------T--TCHHHHHHHHHHHHH---HCTTCTTHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHh-------c--CCHHHHHHHHHHHHH---HCcCCCcHHHH
Confidence 46688999999999999887544455556666666655533 3 358888887777765 34433333444
Q ss_pred HHHHHHHhHhhChhhHHHhhCCCCChhhHHHHHHHHHHHHHHHHHhcCCCCCccCCCCChHHHHHHHHhhccHHHHHHhh
Q 005346 259 QAQIDETLEEINPRCVLELLGLPLSGEYQARREEGLHGMLNILWAVGGGGATAIAGGFTRESFMNEAFLRMTSAEQVKLF 338 (701)
Q Consensus 259 q~eIe~~L~eL~PyriLELLalPL~~e~~~~Rq~GL~lLr~lL~~rgg~G~~~~~~gl~~edFl~q~~~~LTa~EQvdLF 338 (701)
.-.+-..+.++.+..+-.++.+........+-.+++..++.++..-.. +.... + +...|..... .+
T Consensus 81 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~-------~~~a~-~----a~~~l~~~~~-~~- 146 (225)
T 2yhc_A 81 MYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPN-------SQYTT-D----ATKRLVFLKD-RL- 146 (225)
T ss_dssp HHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTT-------CTTHH-H----HHHHHHHHHH-HH-
T ss_pred HHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcC-------ChhHH-H----HHHHHHHHHH-HH-
Confidence 444444454444443333333332222234567888889888874311 11111 1 1111110000 00
Q ss_pred hcCCCCCCchhHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhh
Q 005346 339 SATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV 418 (701)
Q Consensus 339 ~~~~~~~s~da~~~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLL 418 (701)
...-|..+..+...| -..+|...++++... . |......+...-.+.|+.-+
T Consensus 147 ----------~~~~~~~a~~~~~~~-------~~~~A~~~~~~~l~~----~--------p~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 147 ----------AKYEYSVAEYYTERG-------AWVAVVNRVEGMLRD----Y--------PDTQATRDALPLMENAYRQM 197 (225)
T ss_dssp ----------HHHHHHHHHHHHHHT-------CHHHHHHHHHHHHHH----S--------TTSHHHHHHHHHHHHHHHHT
T ss_pred ----------HHHHHHHHHHHHHcC-------cHHHHHHHHHHHHHH----C--------cCCCccHHHHHHHHHHHHHc
Confidence 000122233333333 346777777776643 1 11122357888999999999
Q ss_pred CChHHHHHHhc
Q 005346 419 GKLDECRLWLG 429 (701)
Q Consensus 419 Gq~eeA~~~L~ 429 (701)
|+.++|...+.
T Consensus 198 g~~~~A~~~~~ 208 (225)
T 2yhc_A 198 QMNAQAEKVAK 208 (225)
T ss_dssp TCHHHHHHHHH
T ss_pred CCcHHHHHHHH
Confidence 99999999984
No 40
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=55.70 E-value=81 Score=25.52 Aligned_cols=77 Identities=13% Similarity=0.069 Sum_probs=50.9
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
++...|+++.+++.-+.+++-.. ...++... ++.-.+..+ ++..|...+++++++-...+ -...
T Consensus 28 ~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~-------la~~~~~~g--~~~~A~~~~~~al~~~~~~~----~~~~ 91 (115)
T 2kat_A 28 TYAEHEQFDAALPHLRAALDFDP---TYSVAWKW-------LGKTLQGQG--DRAGARQAWESGLAAAQSRG----DQQV 91 (115)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHHH-------HHHHHHHHT--CHHHHHHHHHHHHHHHHHHT----CHHH
T ss_pred HHHHccCHHHHHHHHHHHHHHCC---CcHHHHHH-------HHHHHHHcC--CHHHHHHHHHHHHHhccccc----cHHH
Confidence 55688999999988888886421 11233333 333333443 58999999999999987765 4556
Q ss_pred HHHHHHHhHhhCh
Q 005346 259 QAQIDETLEEINP 271 (701)
Q Consensus 259 q~eIe~~L~eL~P 271 (701)
..++...|.+|..
T Consensus 92 ~~~l~~~l~~l~~ 104 (115)
T 2kat_A 92 VKELQVFLRRLAR 104 (115)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc
Confidence 6677666666543
No 41
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=55.55 E-value=1.5e+02 Score=29.14 Aligned_cols=64 Identities=13% Similarity=0.193 Sum_probs=43.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
.+...|++++++++-+++++-.. .. . ...+-++..++.-.+..+ +|..|...+++++++.++.+
T Consensus 57 ~~~~~g~~~~A~~~~~~al~~~~-~~--~---~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 57 RLCNAGDCRAGVAFFQAAIQAGT-ED--L---RTLSAIYSQLGNAYFYLG--DYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCC-SC--H---HHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcHHHHHHHHHHHHHhcc-cC--h---hHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcc
Confidence 44677888998888888887421 11 1 122334455555555564 59999999999999998765
No 42
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=54.49 E-value=50 Score=28.18 Aligned_cols=78 Identities=17% Similarity=0.047 Sum_probs=52.9
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChH
Q 005346 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPD 257 (701)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~ 257 (701)
.++.+.|+++++++.-+.+++-.. ...++.+.++.+| ...+ +|+.|...+++++++--... -...
T Consensus 60 ~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~ 124 (142)
T 2xcb_A 60 ACRQSLGLYEQALQSYSYGALMDI---NEPRFPFHAAECH-------LQLG--DLDGAESGFYSARALAAAQP---AHEA 124 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHTCG---GGHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCC---CCcHHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHhCCCCc---chHH
Confidence 356789999999999999887422 2234444444443 2333 58999999999998876432 3567
Q ss_pred HHHHHHHHhHhhC
Q 005346 258 LQAQIDETLEEIN 270 (701)
Q Consensus 258 Lq~eIe~~L~eL~ 270 (701)
+...++.-|..+.
T Consensus 125 ~~~~~~~~l~~l~ 137 (142)
T 2xcb_A 125 LAARAGAMLEAVT 137 (142)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7777777777654
No 43
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=52.96 E-value=66 Score=34.66 Aligned_cols=81 Identities=17% Similarity=0.323 Sum_probs=56.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCC
Q 005346 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLA 255 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~ 255 (701)
++...|+|++++.+.++.|.- .+|.. ..||+ .++--||.-.+.++ +|+.|..++++|++++...=+ .=-
T Consensus 349 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-Hp~~a----~~l~nLa~~~~~qg--~~~eA~~~~~~Al~i~~~~lG-~~H 420 (433)
T 3qww_A 349 VCLYMQDWEGALKYGQKIIKPYSKHYPVY-SLNVA----SMWLKLGRLYMGLE--NKAAGEKALKKAIAIMEVAHG-KDH 420 (433)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCSS-CHHHH----HHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHTC-TTC
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHcCCC-ChHHH----HHHHHHHHHHHhcc--CHHHHHHHHHHHHHHHHHHcC-CCC
Confidence 567889999999999999963 34543 34543 34456666677775 699999999999999988622 123
Q ss_pred hHHHHHHHHHhHh
Q 005346 256 PDLQAQIDETLEE 268 (701)
Q Consensus 256 p~Lq~eIe~~L~e 268 (701)
|..+ +++..|++
T Consensus 421 p~~~-~l~~~l~~ 432 (433)
T 3qww_A 421 PYIS-EIKQEIES 432 (433)
T ss_dssp HHHH-HHHHHHHC
T ss_pred hHHH-HHHHHHhc
Confidence 5444 36666654
No 44
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=52.07 E-value=61 Score=34.66 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=49.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 005346 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (701)
++...|+|++++.+.++.|.- .+|.. ..|+ |.++..||.-.+.++ +|+.|..++++|++++...
T Consensus 338 ~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-Hp~~----a~~l~nLa~~~~~~g--~~~eA~~~~~~Al~i~~~~ 404 (429)
T 3qwp_A 338 ACINLGLLEEALFYGTRTMEPYRIFFPGS-HPVR----GVQVMKVGKLQLHQG--MFPQAMKNLRLAFDIMRVT 404 (429)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHHSCSS-CHHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhHHHHcCCC-ChHH----HHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHh
Confidence 567899999999999999963 34543 2443 455666677777775 5999999999999999986
No 45
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=46.63 E-value=83 Score=27.52 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=51.8
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChH
Q 005346 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPD 257 (701)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~ 257 (701)
.++.+.|+++++++.-+.++.-.. ...++.+.++.+| +..+ ++..|...+++++++-.... -+..
T Consensus 63 ~~~~~~g~~~~A~~~~~~al~l~p---~~~~~~~~lg~~~-------~~~g--~~~~A~~~~~~al~~~p~~~---~~~~ 127 (148)
T 2vgx_A 63 ACRQAMGQYDLAIHSYSYGAVMDI---XEPRFPFHAAECL-------LQXG--ELAEAESGLFLAQELIANXP---EFXE 127 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHST---TCTHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHTTCG---GGHH
T ss_pred HHHHHHhhHHHHHHHHHHHHhcCC---CCchHHHHHHHHH-------HHcC--CHHHHHHHHHHHHHHCcCCC---cchH
Confidence 356789999999999999886321 1234444444433 3343 58899999999988765432 3567
Q ss_pred HHHHHHHHhHhhC
Q 005346 258 LQAQIDETLEEIN 270 (701)
Q Consensus 258 Lq~eIe~~L~eL~ 270 (701)
++..++..|..++
T Consensus 128 ~~~~~~~~l~~l~ 140 (148)
T 2vgx_A 128 LSTRVSSMLEAIK 140 (148)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHH
Confidence 7788887777665
No 46
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=46.25 E-value=40 Score=27.51 Aligned_cols=66 Identities=12% Similarity=0.025 Sum_probs=42.2
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
++.+.|++++++++-+..++-...... .-..+.++..++.-.+..+ ++..|...+++++++.++.|
T Consensus 98 ~~~~~~~~~~A~~~~~~a~~~~~~~~~----~~~~~~~~~~la~~~~~~g--~~~~A~~~~~~a~~~~~~~~ 163 (164)
T 3ro3_A 98 TYTLLQDYEKAIDYHLKHLAIAQELKD----RIGEGRACWSLGNAYTALG--NHDQAMHFAEKHLEISREVG 163 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTC----HHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHccc----hHhHHHHHHHHHHHHHHcc--CHHHHHHHHHHHHHHHHHhC
Confidence 456788888888888887753211111 1122444555566666665 49999999999999887643
No 47
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=45.38 E-value=1.2e+02 Score=24.65 Aligned_cols=79 Identities=14% Similarity=0.049 Sum_probs=50.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
++..+|+++++++.-+.+++-.. ...++...+|.+| +..+ +|..|...+++++++-...+..+--+.+
T Consensus 47 ~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~lg~~~-------~~~~--~~~~A~~~~~~al~~~p~~~~~p~~~~~ 114 (126)
T 3upv_A 47 ALAKLMSFPEAIADCNKAIEKDP---NFVRAYIRKATAQ-------IAVK--EYASALETLDAARTKDAEVNNGSSAREI 114 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHH-------HHTT--CHHHHHHHHHHHHHHHHHHHTTTTHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHhCC---CcHHHHHHHHHHH-------HHHh--CHHHHHHHHHHHHHhCcccCCchhHHHH
Confidence 55688999999999999987421 1233444444433 3343 5999999999999987554432234566
Q ss_pred HHHHHHHhHhh
Q 005346 259 QAQIDETLEEI 269 (701)
Q Consensus 259 q~eIe~~L~eL 269 (701)
...|.....++
T Consensus 115 ~~~l~~~~~~l 125 (126)
T 3upv_A 115 DQLYYKASQQR 125 (126)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 66666655544
No 48
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=45.35 E-value=1.2e+02 Score=24.54 Aligned_cols=64 Identities=17% Similarity=0.085 Sum_probs=44.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
++...|++++++++-+..++-. .+.. ...+.++..++.-.+..+ +|+.|...+++++++.++.+
T Consensus 58 ~~~~~g~~~~A~~~~~~a~~~~~~~~~~------~~~~~~~~~l~~~~~~~~--~~~~A~~~~~~a~~~~~~~~ 123 (164)
T 3ro3_A 58 AYIFLGEFETASEYYKKTLLLARQLKDR------AVEAQSCYSLGNTYTLLQ--DYEKAIDYHLKHLAIAQELK 123 (164)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHhCCc------HHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHcc
Confidence 4567899999988888888532 1111 123444555666566664 59999999999999998876
No 49
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=42.64 E-value=31 Score=28.03 Aligned_cols=44 Identities=11% Similarity=0.029 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...|++.... .....+.....|.|+.-+|+.++|...+.
T Consensus 22 ~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 22 NASRALALFEELVET---------------DPDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888887654 11235788999999999999999999984
No 50
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=40.77 E-value=81 Score=26.19 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=30.0
Q ss_pred HHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 005346 214 ALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (701)
Q Consensus 214 ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (701)
|.-|+++|+-.+.++ +|..|...++.|++++...
T Consensus 5 a~dc~~lG~~~~~~~--~y~~A~~W~~~Al~~~~~~ 38 (104)
T 2v5f_A 5 AEDCFELGKVAYTEA--DYYHTELWMEQALRQLDEG 38 (104)
T ss_dssp HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcc--chHHHHHHHHHHHHhhhcc
Confidence 567999999999986 5999999999999998754
No 51
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=39.24 E-value=1.2e+02 Score=26.24 Aligned_cols=65 Identities=23% Similarity=0.227 Sum_probs=45.6
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
++.+.|++++++++-++.++-. .+.. ....+.++..++.-.+..+ +|+.|...+++++++.++.+
T Consensus 75 ~~~~~g~~~~A~~~~~~al~~~~~~~~~-----~~~~~~~~~~lg~~~~~~g--~~~~A~~~~~~al~~~~~~~ 141 (203)
T 3gw4_A 75 VERMAGNWDAARRCFLEERELLASLPED-----PLAASANAYEVATVALHFG--DLAGARQEYEKSLVYAQQAD 141 (203)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHSCCC-----HHHHHHHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHHcCcc-----HHHHHHHHHHHHHHHHHhC--CHHHHHHHHHHHHHHHHhcc
Confidence 5668899999988888888632 2211 1223445555666666664 59999999999999988776
No 52
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=37.59 E-value=1.3e+02 Score=32.77 Aligned_cols=64 Identities=13% Similarity=0.063 Sum_probs=48.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhh---cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHh
Q 005346 179 VLQEAGETEVVLRIGESLLRE---RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEE 249 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~---~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~ 249 (701)
++...|+|++++.+.++.|.- .+|... .|+ |.++-.||.-.+.++ +|+.|..++++|+.++++.
T Consensus 360 ~y~~~g~~~eA~~~~~~aL~i~~~~lG~~H-p~~----a~~l~nLa~~~~~~G--~~~eA~~~~~~Al~i~~~~ 426 (490)
T 3n71_A 360 VLSYLQAYEEASHYARRMVDGYMKLYHHNN-AQL----GMAVMRAGLTNWHAG--HIEVGHGMICKAYAILLVT 426 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHSCTTC-HHH----HHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHcCCCC-HHH----HHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
Confidence 667889999999999999963 345432 443 344455566666664 6999999999999999986
No 53
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=36.09 E-value=1.3e+02 Score=24.23 Aligned_cols=58 Identities=7% Similarity=-0.028 Sum_probs=40.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
++.+.|+++.+++.-+.+++.........++.+.+|.++.. .+ ++..|...++++++.
T Consensus 48 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~-------~g--~~~~A~~~~~~~~~~ 105 (129)
T 2xev_A 48 SYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYG-------EG--KNTEAQQTLQQVATQ 105 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHH-------TT--CHHHHHHHHHHHHHH
T ss_pred HHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHH
Confidence 45688999999999999987544444445666655555533 32 488888888877764
No 54
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=35.12 E-value=1.2e+02 Score=24.73 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=39.2
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
.++...|+++++++.-++.++.... ..++...++.++.. .+ +|..|...+++++++
T Consensus 35 ~~~~~~~~~~~A~~~~~~al~~~p~---~~~~~~~l~~~~~~-------~g--~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 35 STFRTLGEYRKAEAVLANGVKQFPN---HQALRVFYAMVLYN-------LG--RYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTT---CHHHHHHHHHHHHH-------HT--CHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHH-------cC--CHHHHHHHHHHHHHh
Confidence 3667899999999999999974221 25555555555433 32 488888889888875
No 55
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=34.94 E-value=3.3e+02 Score=26.60 Aligned_cols=57 Identities=16% Similarity=0.141 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 186 TEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 186 ~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
++.++++-++.++-. .+. + -..+.++..++.-.+..+ +|+.|...+++++++....+
T Consensus 199 ~~~A~~~~~~al~~~~~~~~----~--~~~~~~~~~la~~~~~~g--~~~~A~~~~~~al~~~~~~~ 257 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGD----R--GAQGRACGNLGNTYYLLG--DFQAAIEHHQERLRIAREFG 257 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTC----H--HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCC----H--HHHHHHHHHHHHHHHHcC--ChHHHHHHHHHHHHHHHhcC
Confidence 777777777766421 111 1 123445555666666664 59999999999999998765
No 56
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=34.75 E-value=50 Score=27.13 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...|++..+. .....++.+..|.|..-+|+.++|...+.
T Consensus 42 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQ---------------FPNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888887654 11226888999999999999999999884
No 57
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=34.60 E-value=2.5e+02 Score=27.47 Aligned_cols=45 Identities=13% Similarity=0.256 Sum_probs=36.3
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 370 ~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
....+|..+++++... . ....++...+|+|..-+|+.++|...|.
T Consensus 180 ~~~~eA~~~~~~~l~~----~-----------p~~~~~~~~la~~~~~~g~~~eA~~~l~ 224 (291)
T 3mkr_A 180 EKLQDAYYIFQEMADK----C-----------SPTLLLLNGQAACHMAQGRWEAAEGVLQ 224 (291)
T ss_dssp THHHHHHHHHHHHHHH----S-----------CCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHh----C-----------CCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5678899999988754 1 1235788899999999999999999984
No 58
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=33.42 E-value=52 Score=28.06 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++.... .....++++..|.|.+-+|+.++|..++.
T Consensus 67 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 67 LYEQALQSYSYGALM---------------DINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788888777643 11235788999999999999999999984
No 59
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=32.72 E-value=1.6e+02 Score=23.70 Aligned_cols=58 Identities=9% Similarity=0.032 Sum_probs=40.7
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
.+.+.|+++++++.-+.+++.........++.+.++.+|. .. .+|..|...+++++++
T Consensus 11 ~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~-------~~--~~~~~A~~~~~~~~~~ 68 (129)
T 2xev_A 11 DALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYY-------AT--RNFQLAEAQFRDLVSR 68 (129)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHH-------HT--TCHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHH-------Hh--ccHHHHHHHHHHHHHH
Confidence 4567899999999999998765445555566665555543 33 3588888888887764
No 60
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=32.52 E-value=79 Score=24.70 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 19 LYREAVHCYDQLITA---------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456777777776543 01225788899999999999999999884
No 61
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=31.73 E-value=1.7e+02 Score=24.63 Aligned_cols=60 Identities=15% Similarity=0.089 Sum_probs=41.0
Q ss_pred HHHHhhhHHHHHHHHHHHhhh--cCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 179 VLQEAGETEVVLRIGESLLRE--RLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~--~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
++.++|+++++++.-+.+|+- .....+ -.+|-+|..++.-....+ +|..|.+.+++++++
T Consensus 51 ~~~~~~~~~~A~~~~~~al~~~~~~~~~~-----~~~a~~~~~lg~~~~~~~--~~~~A~~~~~kal~~ 112 (127)
T 4gcn_A 51 VYFEEKKFAECVQFCEKAVEVGRETRADY-----KLIAKAMSRAGNAFQKQN--DLSLAVQWFHRSLSE 112 (127)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHhCcccchhh-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhh
Confidence 567899999999999999862 222222 123445555665555554 599999999998763
No 62
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=30.91 E-value=3.1e+02 Score=25.10 Aligned_cols=131 Identities=10% Similarity=0.031 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHcCCc-hhhHHHhhcccCCCCCCccccCCCccccchHHHH----
Q 005346 106 DGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANA-SSRREYNQGLADDHADTILTEVPWDKVPGALLVL---- 180 (701)
Q Consensus 106 eEIKkAYRklal~hPDk~~s~eaa~~RfqlI~eAYeVLSDP-~~R~~YD~~L~e~~~~~~~lei~~~~~~GAL~LL---- 180 (701)
++-.+.|.+....+|+...... . .-.+..+|.-++|. +-...|++.+...... ..++...+.=+.+..
T Consensus 21 ~~A~~~~~~~~~~~p~~~~~~~---a-~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~---~~~~~a~~~~g~~~~~~~~ 93 (225)
T 2yhc_A 21 RQAITQLEALDNRYPFGPYSQQ---V-QLDLIYAYYKNADLPLAQAAIDRFIRLNPTH---PNIDYVMYMRGLTNMALDD 93 (225)
T ss_dssp HHHHHHHHHHHHHCTTSTTHHH---H-HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC---TTHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhCCCChHHHH---H-HHHHHHHHHhcCCHHHHHHHHHHHHHHCcCC---CcHHHHHHHHHHHHHhhhh
Confidence 4455667777777787543222 2 23456778778774 3455666665433210 000111111122222
Q ss_pred -------------HHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHH-------HHhhHhhHHHHHcCCCchhhHhHHHH
Q 005346 181 -------------QEAGETEVVLRIGESLLRERLPKSFKQDVVLAMA-------LAYVDISRDAMAFNPPDYIGGCEMLE 240 (701)
Q Consensus 181 -------------qElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~A-------LA~~elarea~~q~~~~y~~aa~~Le 240 (701)
.+.|+++.+++.=+.+++.........+...-++ -++..++.-.+.++ +|..|...++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~--~~~~A~~~~~ 171 (225)
T 2yhc_A 94 SALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERG--AWVAVVNRVE 171 (225)
T ss_dssp --------------CCHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CHHHHHHHHH
T ss_pred hhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--cHHHHHHHHH
Confidence 2367888888888888875433333333322221 12233444444443 4777777777
Q ss_pred HHHHH
Q 005346 241 RALKL 245 (701)
Q Consensus 241 ~al~L 245 (701)
++++.
T Consensus 172 ~~l~~ 176 (225)
T 2yhc_A 172 GMLRD 176 (225)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 63
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=30.81 E-value=1.1e+02 Score=24.35 Aligned_cols=45 Identities=4% Similarity=-0.241 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 370 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 370 ~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
.-..+|...+++..... ....++....|.|..-+|+.++|...+.
T Consensus 64 ~~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 64 LEFQLALKDCEECIQLE---------------PTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TCHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhC---------------CCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 35678888888776530 1225788899999999999999999984
No 64
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=30.48 E-value=2.1e+02 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=11.1
Q ss_pred hhhHhHHHHHHHHHHHHhC
Q 005346 232 YIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 232 y~~aa~~Le~al~LLqr~G 250 (701)
|..|...+++++++..+.|
T Consensus 323 ~~~A~~~~~~al~~~~~~~ 341 (406)
T 3sf4_A 323 HDQAMHFAEKHLEISREVG 341 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5566666666666655544
No 65
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=29.16 E-value=69 Score=25.95 Aligned_cols=56 Identities=7% Similarity=-0.131 Sum_probs=39.4
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
.|.-+.++...| -..+|...|++.... .....+.....|.|+.-+|+.++|...+.
T Consensus 22 ~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 22 RFTLGKTYAEHE-------QFDAALPHLRAALDF---------------DPTYSVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 444444554443 356788888877643 01225788899999999999999999984
No 66
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=28.55 E-value=3e+02 Score=26.82 Aligned_cols=67 Identities=18% Similarity=0.044 Sum_probs=39.5
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCC
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGA 251 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~ 251 (701)
++...|++++++++-+.++......+...+.. -+++.++.-.+..+ ++..|...+++++.+.++.|-
T Consensus 262 ~~~~~g~~~~A~~~l~~a~~~~~~~~~~~~~~----~~~~~la~~~~~~g--~~~~A~~~l~~al~~~~~~g~ 328 (373)
T 1hz4_A 262 AQILLGEFEPAEIVLEELNENARSLRLMSDLN----RNLLLLNQLYWQAG--RKSDAQRVLLDALKLANRTGF 328 (373)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHH----HHHHHHHHHHHHHT--CHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHHHHHHHHHhCcchhhHH----HHHHHHHHHHHHhC--CHHHHHHHHHHHHHHhccccH
Confidence 45567888888777777775321111112221 11222223333443 588999999999999998874
No 67
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=27.66 E-value=83 Score=24.53 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhh-hhHHHHHHHHhhCChHHHHHHhc
Q 005346 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEME-FALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 372 I~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~D-v~lE~avC~LLLGq~eeA~~~L~ 429 (701)
..+|...++++.+. .....+ +.+..|.|..-+|+.++|...+.
T Consensus 16 ~~~A~~~~~~al~~---------------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 16 IENALQALEEFLQT---------------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHHHHH---------------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46788888777643 011246 88999999999999999999984
No 68
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=27.29 E-value=74 Score=27.86 Aligned_cols=44 Identities=20% Similarity=0.119 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
...+|...+++.... .....+..+..|.|++-+|+.++|...+.
T Consensus 70 ~~~~A~~~~~~al~l---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 70 QYDLAIHSYSYGAVM---------------DIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 346777777776543 11225788999999999999999999984
No 69
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=27.23 E-value=1.3e+02 Score=28.52 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=51.6
Q ss_pred hHHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHh
Q 005346 349 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 428 (701)
Q Consensus 349 a~~~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L 428 (701)
....|.-+++||- +++|..|++|-.+|+.+-...- .....|-..-.|+.+.-+|+.++|...+
T Consensus 32 ~~~~F~ya~~Lv~----S~~~~~~~~gI~lLe~ll~~~~-------------p~~~rd~lY~LAv~~~kl~~Y~~A~~y~ 94 (152)
T 1pc2_A 32 KSTQFEYAWCLVR----SKYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 94 (152)
T ss_dssp HHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------ccchHHHHHHHHHHHHHccCHHHHHHHH
Confidence 3457777788764 7889999999999999986510 1245789999999999999999999998
Q ss_pred c
Q 005346 429 G 429 (701)
Q Consensus 429 ~ 429 (701)
.
T Consensus 95 ~ 95 (152)
T 1pc2_A 95 R 95 (152)
T ss_dssp H
T ss_pred H
Confidence 4
No 70
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=26.73 E-value=78 Score=27.40 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++.... .....++...+|.|++-+|+.++|...+.
T Consensus 26 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 26 EYSKAIDLYTQALSI---------------APANPIYLSNRAAAYSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCcCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 456788888777643 11236888999999999999999999884
No 71
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=25.92 E-value=1e+02 Score=23.13 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++..... ....++....|.|..-+|+.++|...+.
T Consensus 24 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4567888887765430 1125778899999999999999999884
No 72
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=25.54 E-value=69 Score=28.88 Aligned_cols=44 Identities=11% Similarity=0.139 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
...+|...+++.... . ....+.++..|.|++-+|+.++|...+.
T Consensus 85 ~~~~Ai~~~~~al~l----~-----------P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 85 QFQQAADLYAVAFAL----G-----------KNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp CHHHHHHHHHHHHHH----S-----------SSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh----C-----------CCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456777777776543 1 1225888999999999999999999984
No 73
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=25.02 E-value=95 Score=25.35 Aligned_cols=56 Identities=11% Similarity=0.004 Sum_probs=39.1
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
.+.-+.++...| -..+|...+++.... .....+..+.+|.|...+|+.++|...+.
T Consensus 41 ~~~~a~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 41 YSNRAAALAKLM-------SFPEAIADCNKAIEK---------------DPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhc-------CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 344445554443 456777777776543 11226788999999999999999999984
No 74
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=24.74 E-value=72 Score=28.73 Aligned_cols=57 Identities=11% Similarity=0.200 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 351 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 351 ~~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
..|.-++++...| -..+|...|+++... .....+.....|.|+.-+|+.++|...+.
T Consensus 38 ~~~~lg~~~~~~g-------~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 38 DIYSYAYDFYNKG-------RIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3445555554444 468899999888754 12236888999999999999999999984
No 75
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=24.58 E-value=4.1e+02 Score=24.32 Aligned_cols=64 Identities=16% Similarity=0.255 Sum_probs=43.4
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
.+...|+++.++++-+++++.. +... ...+.++..++.-.+..+ +|..|.+.+++++++.++.+
T Consensus 14 ~~~~~g~~~~A~~~~~~al~~~-~~~~-----~~~~~~~~~l~~~~~~~g--~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 14 RLCKSGDCRAGVSFFEAAVQVG-TEDL-----KTLSAIYSQLGNAYFYLH--DYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC-CSCH-----HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhccHHHHHHHHHHHHhhC-cccH-----HHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHhhccc
Confidence 4457789999999988888742 2211 122333444555555554 59999999999999988765
No 76
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=23.85 E-value=95 Score=26.82 Aligned_cols=56 Identities=11% Similarity=-0.075 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
.|.-+.++...| -..+|...+++.... .....+..+.+|.|+.-+|+.++|...+.
T Consensus 48 ~~~l~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 48 LSNRAAAYSASG-------QHEKAAEDAELATVV---------------DPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcc-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 444455555444 357788888777643 11236888999999999999999999984
No 77
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.09 E-value=1.1e+02 Score=24.85 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++..+. . ....++....|.|+..+|+.++|..++.
T Consensus 80 ~~~~A~~~~~~~~~~----~-----------~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 123 (148)
T 2dba_A 80 DYDKAETEASKAIEK----D-----------GGDVKALYRRSQALEKLGRLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHH----T-----------SCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh----C-----------ccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788888776543 0 1125788999999999999999999984
No 78
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=22.90 E-value=80 Score=25.18 Aligned_cols=43 Identities=7% Similarity=0.033 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 372 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 372 I~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
..+|...+++.... .....++....|.|...+|+.++|...+.
T Consensus 32 ~~~A~~~~~~al~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 32 YPQAMKHYTEAIKR---------------NPKDAKLYSNRAACYTKLLEFQLALKDCE 74 (133)
T ss_dssp SHHHHHHHHHHHTT---------------CTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc---------------CCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 46788888877643 11226888999999999999999999884
No 79
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=22.80 E-value=1.2e+02 Score=23.53 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|..++++..... ....++....+.|..-.|+.++|..++.
T Consensus 24 ~~~~A~~~~~~~~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 67 (125)
T 1na0_A 24 DYDEAIEYYQKALELD---------------PNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (125)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHC---------------cCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4677888888776430 1125678889999999999999998884
No 80
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=22.11 E-value=1.8e+02 Score=24.37 Aligned_cols=56 Identities=21% Similarity=0.112 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 352 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 352 ~YlaalAliA~GFa~rkP~lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
.|.-+.+++..| -..+|...|++..+. .....+..+..|.|..-+|+.++|...+.
T Consensus 20 ~~~~g~~~~~~g-------~~~~A~~~~~~al~~---------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 75 (121)
T 1hxi_A 20 PMEEGLSMLKLA-------NLAEAALAFEAVCQK---------------EPEREEAWRSLGLTQAENEKDGLAIIALN 75 (121)
T ss_dssp HHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcC-------CHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 455566666555 356788888777653 12236888899999999999999999884
No 81
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=21.89 E-value=1.3e+02 Score=23.60 Aligned_cols=44 Identities=11% Similarity=0.197 Sum_probs=34.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|..++++..... ....++....|.|....|+.++|...+.
T Consensus 19 ~~~~A~~~~~~a~~~~---------------~~~~~~~~~la~~~~~~~~~~~A~~~~~ 62 (131)
T 1elr_A 19 DFDTALKHYDKAKELD---------------PTNMTYITNQAAVYFEKGDYNKCRELCE 62 (131)
T ss_dssp CHHHHHHHHHHHHHHC---------------TTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcC---------------CccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4678888888776531 1125788899999999999999999984
No 82
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=21.76 E-value=1.3e+02 Score=23.16 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 62 (118)
T 1elw_A 19 NIDDALQCYSEAIKL---------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGC 62 (118)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 356677777766543 01125778888999999999999988874
No 83
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=21.66 E-value=5.6e+02 Score=29.25 Aligned_cols=111 Identities=14% Similarity=0.122 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHcCCch-hhHHHhhcccCCCCCCccccCCCccccchH----HH
Q 005346 105 GDGIRRAYEARISKPPQYGFSPDALISRRQILQAACETLANAS-SRREYNQGLADDHADTILTEVPWDKVPGAL----LV 179 (701)
Q Consensus 105 ~eEIKkAYRklal~hPDk~~s~eaa~~RfqlI~eAYeVLSDP~-~R~~YD~~L~e~~~~~~~lei~~~~~~GAL----~L 179 (701)
-++=.+.|++.+...|+. ..+ ...+..+|.-+++.+ -...|++.+.-+. +.+.++ .+
T Consensus 25 ~~eAi~~~~kAl~l~P~~---~~a----~~nLg~~l~~~g~~~eA~~~~~~Al~l~P-----------~~~~a~~nLg~~ 86 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEF---AAA----HSNLASVLQQQGKLQEALMHYKEAIRISP-----------TFADAYSNMGNT 86 (723)
T ss_dssp HHHHHHHHHHHHHHCSCC---HHH----HHHHHHHHHHTTCHHHHHHHHHHHHHHCT-----------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC---HHH----HHHHHHHHHHcCCHHHHHHHHHHHHHhCC-----------CCHHHHHHHHHH
Confidence 445556777776666764 111 234667777777643 3455665543221 112222 36
Q ss_pred HHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 180 LQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 180 LqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
+.++|+++++++.-+++|+-.. .-.+ |+..+|.-...++ +|++|.+.+++|+++
T Consensus 87 l~~~g~~~~A~~~~~kAl~l~P---~~~~-------a~~~Lg~~~~~~g--~~~eAi~~~~~Al~l 140 (723)
T 4gyw_A 87 LKEMQDVQGALQCYTRAIQINP---AFAD-------AHSNLASIHKDSG--NIPEAIASYRTALKL 140 (723)
T ss_dssp HHHTTCHHHHHHHHHHHHHHCT---TCHH-------HHHHHHHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHhCC---CCHH-------HHHHHHHHHHHcC--CHHHHHHHHHHHHHh
Confidence 7889999999988888886321 1123 3333443333343 588888888888875
No 84
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=21.04 E-value=3e+02 Score=23.20 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=43.1
Q ss_pred HHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHH
Q 005346 179 VLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDL 258 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~L 258 (701)
++.++|+++++++.-+.+|+-.. . ..+. +.-+|.--+..+ +|+.|.+.+++++++ .. -.++.
T Consensus 56 ~~~~~~~~~~A~~~~~~al~~~p-~--~~~a-------~~~lg~~~~~~~--~~~~A~~~~~~al~l---~P---~~~~a 117 (126)
T 4gco_A 56 CLTKLMEFQRALDDCDTCIRLDS-K--FIKG-------YIRKAACLVAMR--EWSKAQRAYEDALQV---DP---SNEEA 117 (126)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHCT-T--CHHH-------HHHHHHHHHHTT--CHHHHHHHHHHHHHH---CT---TCHHH
T ss_pred HHHhhccHHHHHHHHHHHHHhhh-h--hhHH-------HHHHHHHHHHCC--CHHHHHHHHHHHHHH---Cc---CCHHH
Confidence 56789999999999999986321 1 2333 333333333443 599999999999886 22 14555
Q ss_pred HHHHHH
Q 005346 259 QAQIDE 264 (701)
Q Consensus 259 q~eIe~ 264 (701)
+..|..
T Consensus 118 ~~~l~~ 123 (126)
T 4gco_A 118 REGVRN 123 (126)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555543
No 85
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=21.02 E-value=3e+02 Score=22.89 Aligned_cols=56 Identities=11% Similarity=-0.036 Sum_probs=36.7
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 178 LVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
..+.+.|+++++++.-+++++... ...+....++.++ ... .++..|...+++++++
T Consensus 25 ~~~~~~g~~~~A~~~~~~al~~~P---~~~~a~~~lg~~~-------~~~--g~~~~A~~~~~~al~l 80 (121)
T 1hxi_A 25 LSMLKLANLAEAALAFEAVCQKEP---EREEAWRSLGLTQ-------AEN--EKDGLAIIALNHARML 80 (121)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHST---TCHHHHHHHHHHH-------HHT--TCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHCC---CCHHHHHHHHHHH-------HHc--CCHHHHHHHHHHHHHh
Confidence 356688999999999999987422 1234444444443 233 2588888888888775
No 86
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=20.98 E-value=2.1e+02 Score=27.45 Aligned_cols=76 Identities=7% Similarity=-0.047 Sum_probs=49.3
Q ss_pred HHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhH-hHHHHHHHHHHHHhCCCCCC
Q 005346 179 VLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGG-CEMLERALKLLQEEGASSLA 255 (701)
Q Consensus 179 LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~a-a~~Le~al~LLqr~G~~~l~ 255 (701)
++.+.|+|++++++-+++|+-. ..... ..+-+|..+|.-....+ +|.+| -..+++|+.+.+..+ -
T Consensus 205 ~y~~~~~y~~Al~~~~kal~~~~~~~~~~------~~~~~~~~lg~~y~~~g--~~~~Ai~~~~~~Al~~~~~~~----~ 272 (293)
T 2qfc_A 205 ALYLDSRYEESLYQVNKAIEISCRINSMA------LIGQLYYQRGECLRKLE--YEEAEIEDAYKKASFFFDILE----M 272 (293)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTBCS------SHHHHHHHHHHHHHHTT--CCHHHHHHHHHHHHHHHHHTT----C
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHcC--CcHHHHHHHHHHHHHHHHHhC----c
Confidence 5668899999999988888632 11111 12444555555555554 48899 667999999999887 3
Q ss_pred hHHHHHHHHHh
Q 005346 256 PDLQAQIDETL 266 (701)
Q Consensus 256 p~Lq~eIe~~L 266 (701)
+....+|..-.
T Consensus 273 ~~~~~~~~~~~ 283 (293)
T 2qfc_A 273 HAYKEALVNKI 283 (293)
T ss_dssp HHHHHHHHHHH
T ss_pred HhhHHHHHHHH
Confidence 55555554433
No 87
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.71 E-value=1.9e+02 Score=23.50 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=35.2
Q ss_pred hHHHHHHHHHHHhhCCCCcccccCccccccchhhhhhhHHHHHHHHhhCChHHHHHHhc
Q 005346 371 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 429 (701)
Q Consensus 371 lI~~A~~ll~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~lE~avC~LLLGq~eeA~~~L~ 429 (701)
-..+|..++++..... |......++....|.|+.-+|+.++|...+.
T Consensus 43 ~~~~A~~~~~~a~~~~------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 89 (148)
T 2dba_A 43 DYGGALAAYTQALGLD------------ATPQDQAVLHRNRAACHLKLEDYDKAETEAS 89 (148)
T ss_dssp CHHHHHHHHHHHHTSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHc------------ccchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 5678888888877541 1111226788899999999999999999884
No 88
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=20.26 E-value=5.8e+02 Score=24.48 Aligned_cols=59 Identities=14% Similarity=0.063 Sum_probs=36.3
Q ss_pred chHHHHHHhhhHHHHHHHHHHHhhhcCCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHH
Q 005346 175 GALLVLQEAGETEVVLRIGESLLRERLPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKL 245 (701)
Q Consensus 175 GAL~LLqElGE~e~Vl~lg~~~Lq~~l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~L 245 (701)
.--..+...|+++.++++-+++++... ...++...+ +.-.+..+ +|..|...+++++++
T Consensus 70 ~~~~~~~~~g~~~~A~~~~~~al~~~p---~~~~~~~~l-------g~~~~~~g--~~~~A~~~~~~al~~ 128 (365)
T 4eqf_A 70 EEGLKRLKEGDLPVTILFMEAAILQDP---GDAEAWQFL-------GITQAENE--NEQAAIVALQRCLEL 128 (365)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHCT---TCHHHHHHH-------HHHHHHTT--CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHhCc---CCHHHHHHH-------HHHHHHCC--CHHHHHHHHHHHHhc
Confidence 333466788999999999999887421 123333333 33333343 477777777777764
No 89
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=20.10 E-value=4.5e+02 Score=25.15 Aligned_cols=65 Identities=11% Similarity=0.068 Sum_probs=46.4
Q ss_pred HHHHHhhhHHHHHHHHHHHhhhc--CCCChhhHHHHHHHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhC
Q 005346 178 LVLQEAGETEVVLRIGESLLRER--LPKSFKQDVVLAMALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEG 250 (701)
Q Consensus 178 ~LLqElGE~e~Vl~lg~~~Lq~~--l~~~~~~Dv~Ls~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G 250 (701)
.+++..|+++++++.-+++|.-. .+.. -..|-++..++.-....+ +|..|...+++|+++..+.|
T Consensus 45 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~------~~~a~~~~~lg~~~~~~g--~~~~A~~~~~~Al~l~~~~g 111 (292)
T 1qqe_A 45 TIYRLRKELNLAGDSFLKAADYQKKAGNE------DEAGNTYVEAYKCFKSGG--NSVNAVDSLENAIQIFTHRG 111 (292)
T ss_dssp HHHHHTTCTHHHHHHHHHHHHHHHHTTCH------HHHHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHhCCH------HHHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHcC
Confidence 46778889988888888777531 2221 134556667776666654 59999999999999998876
No 90
>3iqc_A FLIS, flagellar protein; chaperone, flagellum; 2.70A {Helicobacter pylori} SCOP: a.24.19.0 PDB: 3k1i_A
Probab=20.04 E-value=1.9e+02 Score=26.47 Aligned_cols=67 Identities=10% Similarity=0.071 Sum_probs=53.5
Q ss_pred HHHHhhHhhHHHHHcCCCchhhHhHHHHHHHHHHHHhCCCCCChHHHHHHHHHhHhhChhhHHHhhCCCC
Q 005346 213 MALAYVDISRDAMAFNPPDYIGGCEMLERALKLLQEEGASSLAPDLQAQIDETLEEINPRCVLELLGLPL 282 (701)
Q Consensus 213 ~ALA~~elarea~~q~~~~y~~aa~~Le~al~LLqr~G~~~l~p~Lq~eIe~~L~eL~PyriLELLalPL 282 (701)
-|+-++..|+.+++++ +++...+.+.+|+.++..=. .+|=++--.+|...|..|==|++-+|+.--+
T Consensus 35 gal~~l~~A~~ai~~~--d~~~k~~~i~KA~~Ii~~L~-~sLd~e~GgeiA~nL~~LY~y~~~~L~~An~ 101 (131)
T 3iqc_A 35 GILRFSSQAKRCIENE--DIEKKIYYINRVTDIFTELL-NILDYEKGGEVAVYLTGLYTHQIKVLTQANV 101 (131)
T ss_dssp HHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHH-HTBCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHH-HhcCCccccHHHHHHHHHHHHHHHHHHHhhh
Confidence 3677888899999985 69999999999999886532 3455666679999999999999988875433
Done!