Query 005347
Match_columns 701
No_of_seqs 348 out of 2532
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 22:46:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005347.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/005347hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fed_A Glutamate carboxypeptid 100.0 9E-128 3E-132 1112.9 59.9 659 25-700 10-707 (707)
2 3kas_A Transferrin receptor pr 100.0 2E-111 5E-116 969.1 55.0 614 27-700 5-633 (640)
3 2ek8_A Aminopeptidase; metallo 100.0 6E-57 2E-61 500.0 41.3 398 30-555 6-414 (421)
4 3iib_A Peptidase M28; YP_92679 100.0 1.6E-52 5.4E-57 466.6 39.0 395 38-544 17-434 (444)
5 4f9u_A CG32412; alpha/beta hyd 100.0 5.9E-33 2E-37 295.5 19.1 218 321-554 63-311 (312)
6 4fai_A CG5976, isoform B; alph 100.0 9.8E-31 3.3E-35 280.2 20.5 210 321-543 90-327 (330)
7 4fuu_A Leucine aminopeptidase; 100.0 5E-29 1.7E-33 264.8 19.0 188 323-539 81-307 (309)
8 3pb6_X Glutaminyl-peptide cycl 100.0 2E-27 7E-32 253.1 21.4 203 321-539 93-326 (330)
9 2afw_A Glutaminyl-peptide cycl 100.0 1.9E-27 6.4E-32 254.8 20.5 205 322-540 86-326 (329)
10 1tkj_A Aminopeptidase, SGAP; d 99.9 7.6E-27 2.6E-31 245.1 19.9 197 323-547 63-282 (284)
11 3tc8_A Leucine aminopeptidase; 99.9 4.3E-27 1.5E-31 249.3 17.6 189 322-539 80-308 (309)
12 3gux_A Putative Zn-dependent e 99.9 7.7E-27 2.6E-31 247.5 16.4 189 322-539 82-312 (314)
13 1rtq_A Bacterial leucyl aminop 99.9 3.1E-26 1E-30 242.3 20.4 201 323-547 74-293 (299)
14 3k9t_A Putative peptidase; str 99.9 4.7E-23 1.6E-27 220.1 16.9 196 311-543 154-356 (435)
15 4h2k_A Succinyl-diaminopimelat 99.3 4.5E-11 1.5E-15 123.9 19.1 183 323-542 50-268 (269)
16 3t68_A Succinyl-diaminopimelat 99.3 8E-11 2.7E-15 121.9 17.4 181 324-541 51-267 (268)
17 1y0y_A FRV operon protein FRVX 99.1 2.4E-10 8.1E-15 123.1 14.0 148 354-543 180-351 (353)
18 2wyr_A Cobalt-activated peptid 99.1 1.8E-10 6.1E-15 123.0 11.8 144 354-539 171-331 (332)
19 2fvg_A Endoglucanase; TM1049, 99.1 1.2E-10 4E-15 124.9 7.9 147 354-542 165-335 (340)
20 1vhe_A Aminopeptidase/glucanas 99.1 9.4E-10 3.2E-14 119.4 14.9 148 354-541 182-353 (373)
21 2gre_A Deblocking aminopeptida 99.1 9.1E-10 3.1E-14 118.4 14.0 128 354-513 184-327 (349)
22 3icu_A E3 ubiquitin-protein li 98.8 2.1E-08 7.1E-13 97.7 12.6 106 134-286 61-175 (194)
23 1q7l_A Aminoacylase-1; catalys 98.7 5.1E-08 1.7E-12 96.1 10.1 82 324-408 58-163 (198)
24 3n5f_A L-carbamoylase, N-carba 98.6 1.7E-07 5.8E-12 102.7 10.6 80 324-406 57-142 (408)
25 3kl9_A PEPA, glutamyl aminopep 98.5 3.1E-07 1.1E-11 98.6 11.8 148 353-540 179-344 (355)
26 1ylo_A Hypothetical protein SF 98.4 2.1E-06 7.2E-11 91.8 14.8 147 355-541 168-337 (348)
27 1vho_A Endoglucanase; structur 98.3 1.4E-06 4.7E-11 93.2 11.1 150 355-543 171-337 (346)
28 1cg2_A Carboxypeptidase G2; me 98.3 1.6E-06 5.6E-11 94.2 11.0 90 325-423 71-179 (393)
29 2zog_A Cytosolic non-specific 98.3 2.3E-06 8E-11 95.5 10.7 95 325-423 83-200 (479)
30 3ct9_A Acetylornithine deacety 98.2 1.5E-06 5.3E-11 93.3 8.4 79 324-407 52-152 (356)
31 2pok_A Peptidase, M20/M25/M40 98.2 3.3E-06 1.1E-10 94.5 11.2 96 324-423 92-210 (481)
32 3dlj_A Beta-Ala-His dipeptidas 98.2 3.6E-06 1.2E-10 94.3 11.1 96 324-423 89-207 (485)
33 1z2l_A Allantoate amidohydrola 98.2 1.6E-06 5.6E-11 95.2 6.9 78 325-405 62-145 (423)
34 2vpu_A TET3, 354AA long hypoth 98.1 2E-05 6.8E-10 84.5 14.5 152 353-545 182-352 (354)
35 2v8h_A Beta-alanine synthase; 98.1 4.9E-06 1.7E-10 92.9 9.3 78 324-405 92-175 (474)
36 3pfo_A Putative acetylornithin 98.1 4.2E-06 1.4E-10 92.1 8.5 91 323-422 89-202 (433)
37 3cpx_A Aminopeptidase, M42 fam 98.1 8.4E-06 2.9E-10 86.3 9.7 144 354-539 163-320 (321)
38 3gb0_A Peptidase T; NP_980509. 98.0 4E-06 1.4E-10 90.4 6.4 78 324-405 56-153 (373)
39 2rb7_A Peptidase, M20/M25/M40 98.0 9E-06 3.1E-10 87.5 7.6 90 325-423 51-164 (364)
40 3ife_A Peptidase T; metallopep 97.9 7E-06 2.4E-10 90.6 6.2 91 324-423 80-224 (434)
41 3tx8_A Succinyl-diaminopimelat 97.9 2E-05 6.7E-10 84.8 9.6 90 325-422 58-165 (369)
42 3pfe_A Succinyl-diaminopimelat 97.9 3.7E-05 1.3E-09 85.7 10.8 92 324-422 77-191 (472)
43 3rza_A Tripeptidase; phosphory 97.9 1E-05 3.4E-10 88.1 5.6 78 324-405 74-174 (396)
44 1vgy_A Succinyl-diaminopimelat 97.8 0.00011 3.7E-09 79.8 13.1 80 323-408 50-153 (393)
45 1xmb_A IAA-amino acid hydrolas 97.8 9E-05 3.1E-09 81.2 11.0 78 324-407 71-164 (418)
46 3khx_A Putative dipeptidase sa 97.7 4.8E-05 1.6E-09 85.3 8.8 79 325-408 87-187 (492)
47 1lfw_A PEPV; hydrolase, dipept 97.7 9.4E-05 3.2E-09 82.2 10.2 77 325-407 69-167 (470)
48 1fno_A Peptidase T; metallo pe 97.7 3.3E-05 1.1E-09 84.6 6.0 90 324-423 55-197 (417)
49 3isz_A Succinyl-diaminopimelat 97.6 0.0002 6.7E-09 76.9 10.1 79 323-407 47-149 (377)
50 1ysj_A Protein YXEP; M20 famil 97.6 0.00015 5.1E-09 79.0 9.1 78 324-406 76-169 (404)
51 3isx_A Endoglucanase; TM1050, 97.6 0.00023 7.8E-09 75.8 10.2 127 353-513 177-326 (343)
52 2f7v_A Aectylcitrulline deacet 97.5 8.9E-05 3.1E-09 79.7 6.8 80 324-423 58-159 (369)
53 3ram_A HMRA protein; two-domai 97.4 0.00027 9.3E-09 76.8 8.8 78 324-406 61-143 (394)
54 3mru_A Aminoacyl-histidine dip 97.4 9E-05 3.1E-09 83.0 5.1 89 324-424 56-175 (490)
55 2qyv_A XAA-His dipeptidase; YP 97.3 8.8E-05 3E-09 82.9 3.3 76 324-406 53-159 (487)
56 3io1_A Aminobenzoyl-glutamate 97.2 0.00061 2.1E-08 75.3 8.8 77 325-406 97-196 (445)
57 4fuu_A Leucine aminopeptidase; 96.9 0.0017 5.8E-08 68.1 7.9 51 38-88 21-72 (309)
58 2wzn_A TET3, 354AA long hypoth 96.1 0.056 1.9E-06 55.5 13.8 59 478-547 295-354 (354)
59 3i6s_A Subtilisin-like proteas 95.9 0.012 4.1E-07 67.9 7.8 89 142-287 256-347 (649)
60 3tc8_A Leucine aminopeptidase; 95.6 0.017 5.9E-07 60.4 7.3 50 38-87 21-71 (309)
61 3gux_A Putative Zn-dependent e 95.6 0.019 6.6E-07 60.2 7.6 50 38-87 23-73 (314)
62 2glf_A Probable M18-family ami 95.5 0.032 1.1E-06 61.3 8.9 140 353-515 246-434 (450)
63 1xf1_A C5A peptidase, SCP; hyd 95.4 0.025 8.6E-07 68.0 8.6 55 143-203 260-314 (926)
64 4fai_A CG5976, isoform B; alph 95.2 0.047 1.6E-06 57.6 9.1 50 38-88 34-83 (330)
65 4f9u_A CG32412; alpha/beta hyd 95.1 0.033 1.1E-06 58.2 7.3 47 41-88 10-56 (312)
66 3pb6_X Glutaminyl-peptide cycl 94.4 0.061 2.1E-06 56.7 7.3 58 28-88 27-87 (330)
67 1y9z_A Alkaline serine proteas 93.9 0.09 3.1E-06 57.7 7.5 39 165-203 269-312 (441)
68 1y7e_A Probable M18-family ami 92.7 0.035 1.2E-06 61.2 1.9 141 353-514 252-442 (458)
69 2afw_A Glutaminyl-peptide cycl 92.1 0.17 5.7E-06 53.3 6.1 55 30-87 21-78 (329)
70 2glj_A Probable M18-family ami 92.0 0.1 3.5E-06 57.5 4.4 140 353-514 258-445 (461)
71 3vat_A Dnpep, aspartyl aminope 91.9 0.18 6.1E-06 55.8 6.2 145 353-514 282-469 (496)
72 2ijz_A Probable M18-family ami 91.9 0.1 3.5E-06 57.0 4.2 140 350-513 229-407 (428)
73 1tkj_A Aminopeptidase, SGAP; d 90.1 0.37 1.3E-05 49.4 6.2 49 38-86 3-57 (284)
74 1rtq_A Bacterial leucyl aminop 87.3 0.93 3.2E-05 46.7 7.1 48 30-79 10-58 (299)
75 1q7l_A Aminoacylase-1; catalys 81.8 1.4 4.6E-05 42.5 4.9 48 38-85 6-53 (198)
76 3n5f_A L-carbamoylase, N-carba 70.7 4 0.00014 43.7 5.3 47 39-85 2-56 (408)
77 3gb0_A Peptidase T; NP_980509. 61.1 8.4 0.00029 40.4 5.4 46 38-85 2-47 (373)
78 1cg2_A Carboxypeptidase G2; me 60.9 13 0.00045 39.2 7.0 46 40-85 17-63 (393)
79 3mru_A Aminoacyl-histidine dip 54.0 8.1 0.00028 42.6 3.9 46 38-85 10-55 (490)
80 3ife_A Peptidase T; metallopep 50.3 14 0.00049 39.7 5.1 52 42-93 27-88 (434)
81 2v8h_A Beta-alanine synthase; 49.7 16 0.00056 39.8 5.5 46 39-84 29-90 (474)
82 3dlj_A Beta-Ala-His dipeptidas 48.3 15 0.00051 40.2 4.9 45 40-84 23-73 (485)
83 1q7l_B Aminoacylase-1; catalys 48.1 36 0.0012 27.6 6.1 57 478-544 25-82 (88)
84 3rza_A Tripeptidase; phosphory 47.2 15 0.00053 38.8 4.7 46 38-85 20-65 (396)
85 3fx7_A Putative uncharacterize 45.9 28 0.00095 29.2 4.9 80 544-629 5-89 (94)
86 2zog_A Cytosolic non-specific 45.6 22 0.00077 38.5 5.8 46 40-85 18-67 (479)
87 2qyv_A XAA-His dipeptidase; YP 45.5 19 0.00065 39.3 5.2 45 38-84 7-51 (487)
88 3vta_A Cucumisin; subtilisin-l 44.1 27 0.00094 39.6 6.3 35 165-202 277-311 (621)
89 1lfw_A PEPV; hydrolase, dipept 43.9 24 0.00083 38.1 5.7 44 40-83 12-65 (470)
90 3t68_A Succinyl-diaminopimelat 41.9 17 0.0006 36.2 3.8 43 40-84 4-46 (268)
91 1z2l_A Allantoate amidohydrola 41.8 26 0.0009 37.2 5.5 44 41-84 8-59 (423)
92 3pfo_A Putative acetylornithin 41.6 22 0.00074 38.0 4.8 40 42-83 26-65 (433)
93 1fno_A Peptidase T; metallo pe 35.2 24 0.00083 37.5 3.9 43 43-85 3-54 (417)
94 2rb7_A Peptidase, M20/M25/M40 35.2 44 0.0015 34.8 5.8 45 41-85 5-50 (364)
95 3c8o_A Regulator of ribonuclea 34.1 1.4E+02 0.0048 27.5 8.4 66 134-201 23-94 (162)
96 3ct9_A Acetylornithine deacety 34.1 44 0.0015 34.6 5.6 41 42-84 11-51 (356)
97 1ysj_A Protein YXEP; M20 famil 33.7 33 0.0011 36.4 4.6 41 42-84 32-72 (404)
98 3ram_A HMRA protein; two-domai 33.4 45 0.0015 35.2 5.6 42 41-84 15-56 (394)
99 1q5x_A Regulator of RNAse E ac 33.4 1.2E+02 0.0043 27.7 7.9 66 134-201 23-94 (161)
100 1xmb_A IAA-amino acid hydrolas 32.8 39 0.0013 35.9 5.1 41 42-84 28-68 (418)
101 2pok_A Peptidase, M20/M25/M40 32.5 33 0.0011 37.3 4.5 44 41-84 42-87 (481)
102 3isx_A Endoglucanase; TM1050, 31.5 21 0.00071 37.4 2.5 42 43-86 12-53 (343)
103 1vi4_A Regulator of ribonuclea 31.4 1.4E+02 0.0047 27.9 7.9 66 134-201 26-97 (174)
104 3kl9_A PEPA, glutamyl aminopep 29.4 33 0.0011 36.0 3.6 41 43-85 4-44 (355)
105 2gre_A Deblocking aminopeptida 28.8 34 0.0011 35.6 3.6 44 39-84 3-46 (349)
106 1vgy_A Succinyl-diaminopimelat 28.6 35 0.0012 35.9 3.7 43 39-83 3-45 (393)
107 4h2k_A Succinyl-diaminopimelat 28.2 40 0.0014 33.5 3.9 41 42-84 6-46 (269)
108 1j3l_A Demethylmenaquinone met 27.5 2.1E+02 0.007 26.4 8.3 65 135-201 23-93 (164)
109 1vhe_A Aminopeptidase/glucanas 25.9 45 0.0015 34.9 3.9 43 40-84 5-47 (373)
110 3isz_A Succinyl-diaminopimelat 24.9 51 0.0017 34.1 4.1 40 42-83 3-42 (377)
111 1nxj_A Probable S-adenosylmeth 24.4 1.5E+02 0.0053 27.8 6.9 66 134-201 52-123 (183)
112 3noj_A 4-carboxy-4-hydroxy-2-o 23.3 2.5E+02 0.0084 27.5 8.5 65 136-201 50-120 (238)
113 2pcn_A S-adenosylmethionine:2- 22.3 1.7E+02 0.0057 26.9 6.6 65 135-201 22-92 (161)
114 4eme_A M18 aspartyl aminopepti 21.8 93 0.0032 34.7 5.5 130 386-540 373-560 (571)
115 2wzn_A TET3, 354AA long hypoth 21.7 44 0.0015 33.2 2.8 40 46-86 13-52 (354)
116 3khx_A Putative dipeptidase sa 21.7 1E+02 0.0034 33.6 5.8 44 40-83 32-85 (492)
117 2vpu_A TET3, 354AA long hypoth 21.7 38 0.0013 35.5 2.3 43 43-86 10-52 (354)
118 2glf_A Probable M18-family ami 21.1 37 0.0013 36.9 2.1 27 325-351 71-97 (450)
119 3cpx_A Aminopeptidase, M42 fam 20.7 38 0.0013 34.8 2.0 41 43-85 18-58 (321)
No 1
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=100.00 E-value=9.4e-128 Score=1112.93 Aligned_cols=659 Identities=36% Similarity=0.669 Sum_probs=590.9
Q ss_pred CchhHHHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeeeEEEEeeccc---cceEE
Q 005347 25 PKSFYHSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPVS---RSLSL 100 (701)
Q Consensus 25 ~~~~~~~~~~~~~~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~-~~~~~y~v~~~~p~~---~~l~l 100 (701)
...++++.+++ .++.++|++||++|++.||++||+|+.++|+||+++|+++||+ +++++|+++++||.. .+++|
T Consensus 10 ~~~~l~~~~~~--~~~~~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~~~y~v~l~~P~~~~~~~l~l 87 (707)
T 3fed_A 10 YHQSIRWKLVS--EMKAENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKLVHYDVLLSYPNETNANYISI 87 (707)
T ss_dssp ---CHHHHHHH--HCCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEEEEEECCTTSCCEEEE
T ss_pred CHHHHHHHHHH--hCCHHHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeEEeeeEEeecccCCCCceEEE
Confidence 34678899999 8999999999999999999999999999999999999999999 899999999999975 46888
Q ss_pred ecCCCCCceEeeecccccCCCCCCCCCCcccccccccCCCcceEeeEEEecCCChhchHHHHhc-CCcccceEEEEEeCC
Q 005347 101 TRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEM-VVNVTGTVVLARYGQ 179 (701)
Q Consensus 101 ~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~-gv~v~GkIvlv~~g~ 179 (701)
++++|+..+.+.+.|+.+++++ ..++.+++|++||++|+++|+|||||||+.+||+.|++. |++++|||||++||.
T Consensus 88 ~~~~g~~~~~~~l~e~~~~~~~---~~~~~~~~f~ays~~G~v~g~lV~v~~G~~~Df~~L~~~~~~~v~GkIvlv~~G~ 164 (707)
T 3fed_A 88 VDEHETEIFKTSYLEPPPDGYE---NVTNIVPPYNAFSAQGMPEGDLVYVNYARTEDFFKLEREMGINCTGKIVIARYGK 164 (707)
T ss_dssp ECTTSCEEEECC---CCCTTCT---TCCCCCCSCCTTCCCBCCEECEEECTTCCHHHHHHHHHTSCCCCTTCEEEEECCS
T ss_pred EcCCCceeeeccccccCCcccc---ccccccccccccCCCCceEEEEEEecCCchhhHHHHHhccCCCCCCeEEEEECCC
Confidence 8877776788888887776544 346778899999999999999999999999999999985 999999999999999
Q ss_pred CchhhHHHHHHHcCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCceeccee--cCCCCCCCCCCCCCCcccccChHH
Q 005347 180 IFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVY--DGTGDPTTPGWPSSEGCERLSKEE 257 (701)
Q Consensus 180 ~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~--~~~Gdp~tPg~ps~~~~~r~~~~~ 257 (701)
++++.|+++|+++||+|||||+||.++... ..++||++||+|+++||||+|. .++|||+||||||.++++|+++.+
T Consensus 165 ~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~--g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ps~~~~~r~~~~~ 242 (707)
T 3fed_A 165 IFRGNKVKNAMLAGAIGIILYSDPADYFAP--EVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGYPAKEYTFRLDVEE 242 (707)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCHHHHCCT--TCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTSCCCTTCCCCCGGG
T ss_pred CCHhHHHHHHHHCCCEEEEEEcCchhcccc--ccccCCCCccCCCccccccceecccCCCCCCCCCCcccCCCcccChhh
Confidence 999999999999999999999998765221 1257999999999999999994 467999999999999999999886
Q ss_pred HhhhCCCCCCCccccCHHHHHHHHHHhCCCCCCcc-cccCCCCCccccCCCC------eEEEEEEeeeeeeeeeeeEEEE
Q 005347 258 VEKAGNVPLIPSLPISAKDGETIMRSIGGEVANED-WQGDKDAPIYRVGPGP------GVVNLSYTGEYVMATIQNVIGI 330 (701)
Q Consensus 258 ~~~~~~~~~IP~~~is~~~a~~Ll~~l~g~~~~~~-w~~~~~~~~~~~Gp~~------~~v~l~~~~~~~~~~~~NVia~ 330 (701)
+ ..+|+||++|||+++|++|++.|+|..+|.+ |+|+++ ++|++||+. .+|+|++++..+..+++||||+
T Consensus 243 ~---~~~p~IP~~pIS~~da~~Ll~~l~g~~~p~~~W~g~~~-~~y~~gp~~~g~~~~~~v~l~v~~~~~~~~~~NVi~~ 318 (707)
T 3fed_A 243 G---VGIPRIPVHPIGYNDAEILLRYLGGIAPPDKSWKGALN-VSYSIGPGFTGSDSFRKVRMHVYNINKITRIYNVVGT 318 (707)
T ss_dssp C---TTCCSSCEEEECHHHHHHHHHTBCBSCCSSGGGCCSSS-SCCCCBSSBCCC-CCCEEEEEBCCEEEEEEEEEEEEE
T ss_pred c---cCCCCCCeEecCHHHHHHHHHHhcCCCCcccccccCcC-cceecccccCCCCCceeEEEEEEEEEEEEEEEEEEEE
Confidence 5 4689999999999999999999998888876 999997 889999852 4789999888889999999999
Q ss_pred ecCCCCCCcEEEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHh
Q 005347 331 IPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREM 410 (701)
Q Consensus 331 i~G~~~~~~~Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~ 410 (701)
|+|+++++++||||||+|||..||.||++|+|++||+||.|+++.+.||+|+|+|+|++|+|||.|++||++|++++...
T Consensus 319 i~G~~~~~~~vllgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~g~~p~r~I~f~~~~~EE~Gl~GS~~~~~~~~~~ 398 (707)
T 3fed_A 319 IRGSVEPDRYVILGGHRDSWVFGAIDPTSGVAVLQEIARSFGKLMSKGWRPRRTIIFASWDAEEFGLLGSTEWAEENVKI 398 (707)
T ss_dssp ECCSSEEEEEEEEEEECCCSSSCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESCGGGTSHHHHHHHHHHHHH
T ss_pred EeCCCCCCceEEEeccccCCCCCCccCcHHHHHHHHHHHHHHhhhhccCCCCCCEEEEEeCCccccchhHHHHHHhcchh
Confidence 99987678999999999999999999999999999999999999888999999999999999999999999999999888
Q ss_pred hhccEEEEEEecCcccCC-ccccccChhHHHHHHHHHHHcCCCCC--CcchhhhccccCC------CCCccccCCCCCCc
Q 005347 411 LASRAVAYLNIDSAVHEA-GFHASATPQLDELLKQAAKQVQDPDN--SSQTIYDSWTGSS------NSPVIGRLGGGGSD 481 (701)
Q Consensus 411 l~~~~va~iNlD~~g~g~-~~~~~~~p~l~~~~~~~~~~v~~p~~--~~~~~~~~~~~~~------~~~~~~~~~~~~SD 481 (701)
+.+++++|||+||++.|. .|.+.++|.+..++.++++.+.+|.. .+.++|+.|.... ..|.+..++ ++||
T Consensus 399 ~~~~~~a~iNlD~~~~g~~~~~~~~sp~l~~~i~~~~~~v~~P~~~~~~~tly~~w~~~~~~~~~~~~p~i~~lg-sgSD 477 (707)
T 3fed_A 399 LQERSIAYINSDSSIEGNYTLRVDCTPLLYQLVYKLTKEIPSPDDGFESKSLYESWLEKDPSPENKNLPRINKLG-SGSD 477 (707)
T ss_dssp HHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHTTSBCCSTTCTTSBHHHHHHHHSEETTEEEEECEECCC-SSST
T ss_pred hhhCEEEEEEecccccCCceEEEecCHHHHHHHHHHHhcCCCCccccccccHHHHHHhhcccccccCCcccccCC-CCCC
Confidence 889999999999999984 78999999999999999999999864 3578999998632 123466788 9999
Q ss_pred hHhHHhcCCceEEEeeeCC--------CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCCCCCChhHH
Q 005347 482 YAAFIQHIGVPVADMSFGT--------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSY 553 (701)
Q Consensus 482 ~~~F~~~~GIPs~~~~~~~--------~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y 553 (701)
|.||+++.|||++++.|.. .|++|||.+||++||++|+||+|.+|.+++++++.++++||++++||||+.+|
T Consensus 478 ~~~F~~~~GIPs~~~~f~~~~~~~~~~~y~~YHT~~Dt~~~~~~~~Dp~f~~h~~~a~~~g~l~l~La~~~vlP~~~~~y 557 (707)
T 3fed_A 478 FEAYFQRLGIASGRARYTKNKKTDKYSSYPVYHTIYETFELVEKFYDPTFKKQLSVAQLRGALVYELVDSKIIPFNIQDY 557 (707)
T ss_dssp THHHHHTTCCCEEEEEEECCTTTCCSSSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHHHHCSSCCCCHHHH
T ss_pred hHHHHHhCCcceeccccccCccccccCCCCCcCCCcccHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCccCCCCHHHH
Confidence 9999998999999999862 46899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-------hhcCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHhHHHHHHHHhc
Q 005347 554 AFELQKSTKDLENE-------VSGKGISLIPLFKSIEELAKAAAKIDNEKKAKGWASTWKKDQYKVRELNDRLMMAERAF 626 (701)
Q Consensus 554 ~~~l~~~~~~l~~~-------~~~~~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er~f 626 (701)
++.|++++++|.+. ++..+++|++|.+|+.+|++++++|+++++.+. ..++..+|++|+|||++||+|
T Consensus 558 a~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~~~~~a~~~~~~~~~~~-----~~~~~~~r~~N~~l~~~Er~f 632 (707)
T 3fed_A 558 AEALKNYAASIYNLSKKHDQQLTDHGVSFDSLFSAVKNFSEAASDFHKRLIQVD-----LNNPIAVRMMNDQLMLLERAF 632 (707)
T ss_dssp HHHHHHHHHHHHHHHGGGHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHTTCC-----TTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhhcchhhhcCcCHHHHHHHHHHHHHHHHHHHHHHHhhh-----cCCHHHHHHHHHHHHHHHHHh
Confidence 99999999987531 233468999999999999999999999887652 346789999999999999999
Q ss_pred cCCCCCCCCCCCceEEecCCCCCCCCCCcchhHHHHHHHH-hhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005347 627 TDRDGLSGRPWYKHLIYAPSKHNDYGSKYFPAIDDAIEEA-MKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 700 (701)
Q Consensus 627 l~~~glp~r~~~kHvifaP~~~~~y~~~~fPgi~dai~~~-~~~~~~~~~~~~~~q~~~v~~~i~~Aa~~L~~~~ 700 (701)
|+++|||+|+|||||||||+.+++|++++||||+|||... +.....++|+++|+||++++++|++|++.|+..|
T Consensus 633 l~~~glp~r~~~kHvi~ap~~~~~y~~~~fPgi~dai~~~~~~~~~~~~~~~~~~ql~~~~~~i~~aa~~L~~~~ 707 (707)
T 3fed_A 633 IDPLGLPGKLFYRHIIFAPSSHNKYAGESFPGIYDAIFDIENKANSRLAWKEVKKHISIAAFTIQAAAGTLKEVL 707 (707)
T ss_dssp BCTTCBTTBTTCCBSSEEEETTEEEEEEESHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-
T ss_pred cCCCCCCCCCCCceEEECCCCCCCccceeCchHHHHHHHhhccCcchhhHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999865 3333456899999999999999999999998754
No 2
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=100.00 E-value=1.6e-111 Score=969.14 Aligned_cols=614 Identities=26% Similarity=0.415 Sum_probs=536.5
Q ss_pred hhHHHHhhccCCCChhHHHHHHHHhhc---CCCCCCCHhhHHHHHHHHHHHHHCCCc-eeeeeeEEEEeecc--ccceEE
Q 005347 27 SFYHSLYTSTSLSDNVSISHHLHTLTR---RPHVAGSEANAEAAAYVLSVFTSCSLE-SHIASYGVSLTYPV--SRSLSL 100 (701)
Q Consensus 27 ~~~~~~~~~~~~i~~~~i~~~l~~ls~---~~r~aGs~g~~~~a~yi~~~~~~~Gl~-~~~~~y~v~~~~p~--~~~l~l 100 (701)
.++++.+.+ .+++++|++||++|++ .+|.+||+|+.++++||+++|+++||+ ++.++|.+.+++|. ..++++
T Consensus 5 ~~l~~~l~~--~i~~~~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~~v~~~~~~v~~~~~~~~~~~l~l 82 (640)
T 3kas_A 5 DDLKRKLSE--KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKVWRDQHFVKIQVKDSAQNSVII 82 (640)
T ss_dssp HHHHHHHHH--HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEEEEEECCSSCCEEEE
T ss_pred HHHHHHHHH--hCCHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCccccccceEEEEEeccCCCceEEE
Confidence 477888888 8999999999999999 699999999999999999999999998 57788888888873 356777
Q ss_pred ecCCCCCceEeeecccccCCCCCCCCCCcccccccccCCCcceEeeEEEecCCChhchHHHHhcCCcccceEEEEEeCCC
Q 005347 101 TRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQI 180 (701)
Q Consensus 101 ~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvlv~~g~~ 180 (701)
+.++|+..+.+. .+ ..|++||++|+++|+|||||||+.+||+.|+ +|++|||||+++|.|
T Consensus 83 ~~~~g~~~~~~~--------~~---------~~~~~~S~~g~v~g~lV~vg~G~~~D~~~l~---vdv~GkIvlv~~g~~ 142 (640)
T 3kas_A 83 VDKNGRLVYLVE--------NP---------GGYVAYSKAATVTGKLVHANFGTKKDFEDLY---TPVNGSIVIVRAGKI 142 (640)
T ss_dssp EETTTTEEEEEE--------CC---------SCCEETCCCEEEEECEEECTTCCHHHHHTCS---SCCTTSEEEEESCSS
T ss_pred EeCCCceeeecc--------CC---------cceeeecCCCceEEEEEEecCCChhhHHHhh---cccCCcEEEEecCCC
Confidence 665554221111 11 2478999999999999999999999999775 899999999999999
Q ss_pred chhhHHHHHHHcCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhh
Q 005347 181 FRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEK 260 (701)
Q Consensus 181 ~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~ 260 (701)
+++.|+.+|+++||+|||+|+++.+++.. .....++|++.++.|||+||||||..+. ++++.+.
T Consensus 143 ~~~~K~~~A~~~GA~gvii~~~~~~~~~~-------------~~~~~~~G~~~~~~Gdp~tpg~ps~~~~-~~~~~~~-- 206 (640)
T 3kas_A 143 TFAEKVANAESLNAIGVLIYMDQTKFPIV-------------NAELSFFGHAHLGTGDPYTPGFPSFNHT-QFPPSRS-- 206 (640)
T ss_dssp CHHHHHHHHHTTTCSEEEEECCTTTCCCS-------------CTTCCCCEECCSSSSCSCCCSSCC---C-CCCCCSS--
T ss_pred CHHHHHHHHHHCCCeEEEEEecccccccc-------------ccccccccccccCCCCCCCCCccccccc-ccccccc--
Confidence 99999999999999999999998654321 1123467888778899999999998654 3433222
Q ss_pred hCCCCCCCccccCHHHHHHHHHHhCCCCCCcccccCCCCCccccCCCCeEEEEEEeeeeeeeeeeeEEEEecCCCCCCcE
Q 005347 261 AGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEEPDRL 340 (701)
Q Consensus 261 ~~~~~~IP~~~is~~~a~~Ll~~l~g~~~~~~w~~~~~~~~~~~Gp~~~~v~l~~~~~~~~~~~~NVia~i~G~~~~~~~ 340 (701)
...|+||+++||+++|++|++.+++ ..+..|+++++ +.|.+||+ .++++++++..+..+++||||+|+|++.|+++
T Consensus 207 -~~~p~IP~~~Is~~~a~~Ll~~l~g-~~~~~~~~~~~-~~~~~g~~-~~v~l~v~~~~~~~~~~NVi~~i~G~~~~~~~ 282 (640)
T 3kas_A 207 -SGLPNIPVQTISRAAAEKLFGNMEG-DCPSDWKTDST-CRMVTSES-KNVKLTVSNVLKEIKILNIFGVIKGFVEPDHY 282 (640)
T ss_dssp -CCCCSSCEEECCHHHHHHHHTTEEE-ECCGGGCCCTT-CEEEECTT-EEEEEEECCEEEEEEEEEEEEEECCSSEEEEE
T ss_pred -cCCCCCCEEecCHHHHHHHHHHccC-CchhhhhcccC-cccccCCC-ceEEEEEEEEEEeeeEEEEEEEEeCCcCCCCc
Confidence 3589999999999999999999977 56789999986 88999874 57888888888889999999999999667899
Q ss_pred EEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhH-HcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEE
Q 005347 341 VILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQ-KRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYL 419 (701)
Q Consensus 341 Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~-~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~i 419 (701)
||++||+|||.+||+||+||+|+|||+||.|+++. +.||+|+|+|+|++|+|||.|++||++|++++...+.+++++||
T Consensus 283 vvvgaH~Ds~~~Ga~D~~sG~a~lLe~ar~l~~~~~~~g~~p~r~I~f~~~~~EE~gl~GS~~~~~~~~~~l~~~~~a~i 362 (640)
T 3kas_A 283 VVVGAQRDAWGPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLKAFTYI 362 (640)
T ss_dssp EEEEEECCCSSCCTTTTHHHHHHHHHHHHHHHHHHHTSCCCCSEEEEEEEESSGGGTSHHHHHHHHHTTTTGGGTEEEEE
T ss_pred eeeecccCCCCCCCCcCcHHHHHHHHHHHHHHHhhhhcCCCCCCcEEEEEECCcccCchhHHHHHHhhhhhhhhCEEEEE
Confidence 99999999999999999999999999999999885 66899999999999999999999999999998877789999999
Q ss_pred EecCcccCC-ccccccChhHHHHHHHHHHHcCCCCCCcchhhh--ccccCCCCCccccCCCCCCchHhHHhcCCceEEEe
Q 005347 420 NIDSAVHEA-GFHASATPQLDELLKQAAKQVQDPDNSSQTIYD--SWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADM 496 (701)
Q Consensus 420 NlD~~g~g~-~~~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~ 496 (701)
|+||+|.|. .|.+.++|.+..++.++++.+.+|.. +.++|+ .|.. .+..++ ++|||.||+++.|||++++
T Consensus 363 NlD~~~~G~~~l~~~~~p~l~~l~~~~~~~v~~P~~-~~tl~~~~~w~~-----~~~~~~-~~sD~~~F~~~~GIP~~~~ 435 (640)
T 3kas_A 363 NLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVT-GQFLYQDSNWAS-----KVEKLT-LDNAAFPFLAYSGIPAVSF 435 (640)
T ss_dssp ECTTCBSCSSEEEEEECGGGHHHHHHHHTTCBCTTT-CSBSCCCTTGGG-----GCCCCC-TTSTHHHHHHHHCCCEEEE
T ss_pred ecccCccCCCceEEEeCHHHHHHHHHHHHhCCCCCC-CCceeccccccc-----ccCCCC-CCcchHHHHHhCCCCeeec
Confidence 999999884 79999999999999999999998865 467876 4763 245566 8999999998889999999
Q ss_pred eeCC--CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHHHHHHHHHHHHHhhhc---C
Q 005347 497 SFGT--GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSYAFELQKSTKDLENEVSG---K 571 (701)
Q Consensus 497 ~~~~--~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y~~~l~~~~~~l~~~~~~---~ 571 (701)
.|.. .|++|||.+||+++|++|.||+|.+|.+++++++.++++||++++||||+.+|++.|+++++++++.... .
T Consensus 436 ~~~~~~~y~~yHT~~Dt~~~i~~~~~~~~~~h~~~a~~~g~l~l~La~~~~lP~~~~~y~~~l~~~~~~l~~~~~~~~~~ 515 (640)
T 3kas_A 436 CFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQYRADIKEM 515 (640)
T ss_dssp EEECSSCCTTTTSTTCCHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHHSSSCCCCTTHHHHHHHHHHHHHGGGTTTTTTT
T ss_pred cccCCCCCCCcCCccccHHHHHhhcCcHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 9863 4788999999999999999999999999999999999999999999999999999999999999875442 3
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHhHHHHHHHHhccCCCCCCCCCCCceEEecCCCCCCC
Q 005347 572 GISLIPLFKSIEELAKAAAKIDNEKKAKGWASTWKKDQYKVRELNDRLMMAERAFTDRDGLSGRPWYKHLIYAPSKHNDY 651 (701)
Q Consensus 572 ~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er~fl~~~glp~r~~~kHvifaP~~~~~y 651 (701)
+++|++|.+|+.+|++++++|.+.++... ..++..+|++|+|||++||+||+|+|+|+|+|||||||||+.+
T Consensus 516 ~~~~~~l~~a~~~f~~aa~~~~~~~~~~~-----~~~~~~~r~~N~~l~~~er~fl~~~glp~r~~~kHvi~~p~~~--- 587 (640)
T 3kas_A 516 GLSLQWLYSARGDFFRATSRLTTDFGNAE-----KTDRFVMKKLNDRVMRVEYHFLSPYVSPKESPFRHVFWGSGSH--- 587 (640)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHHHSC-----TTCHHHHHHHHHHHHHHGGGGBCTTSCTTTCSCCBTTTSCSTT---
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCHHHHHHHHHHHHHHHHhhcCcCCCCCCcccceeeecCCcc---
Confidence 69999999999999999999999887642 3467789999999999999999999999999999999999865
Q ss_pred CCCcchhHHHHHHHHhhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005347 652 GSKYFPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL 700 (701)
Q Consensus 652 ~~~~fPgi~dai~~~~~~~~~~~~~~~~~q~~~v~~~i~~Aa~~L~~~~ 700 (701)
+||||.|||...+.....++|+++++||++++++|++|+++|+++.
T Consensus 588 ---~~pg~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~i~~aa~~L~~~~ 633 (640)
T 3kas_A 588 ---TLPALLENLKLRKQNNGAFNETLFRNQLALATWTIQGAANALSGDV 633 (640)
T ss_dssp ---SHHHHHHHHHTTSSCSTTCCHHHHHHHHHHHHHHHHHHHHHHSCST
T ss_pred ---ccchHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 4899999998776666678999999999999999999999999874
No 3
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=100.00 E-value=6e-57 Score=499.96 Aligned_cols=398 Identities=22% Similarity=0.323 Sum_probs=312.2
Q ss_pred HHHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeEEEEeeccccceEEecCCCCCce
Q 005347 30 HSLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGVSLTYPVSRSLSLTRPPPQPPI 109 (701)
Q Consensus 30 ~~~~~~~~~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~v~~~~p~~~~l~l~~~~g~~~~ 109 (701)
++.+++ .++.+++++||++|++.+|.+||+|++++++||+++|+++||+++.++|. +...+.....++.. +|.
T Consensus 6 ~~~~~~--~i~~~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~q~~~-~~~~~~~~~~~l~~-~~~--- 78 (421)
T 2ek8_A 6 DHQITK--RTDAENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEVQPFQ-FEGYTAPSEVTLKI-GTE--- 78 (421)
T ss_dssp HHHHHT--TCCHHHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE-EEEEECCSEEEEEE-TTE---
T ss_pred HHHHHh--hCCHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEEEEEE-eeccccCCceEEEE-CCe---
Confidence 346788 89999999999999999999999999999999999999999999888888 43333221122221 111
Q ss_pred EeeecccccCCCCCCCCCCcccccccccCCCcceEeeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCchhhHHHHH
Q 005347 110 TFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNA 189 (701)
Q Consensus 110 ~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvlv~~g~~~~~~k~~~A 189 (701)
.+.+.+++||++|+++|+|||+|||..+||+ +++++|||||+++|.|.++.|+.+|
T Consensus 79 -------------------~~~~~~~~~s~~g~v~a~lv~~~~G~~~D~~-----~~dv~GkIvlv~~g~~~~~~k~~~A 134 (421)
T 2ek8_A 79 -------------------KKEGEAFTYSPNSDVTAELVYVGLGTTADVA-----GKDLNGKIALIQRGNISFADKVRNA 134 (421)
T ss_dssp -------------------EECCEECBTCCCEEEEEEEEECTTCCTTTTT-----TSCCTTSEEEEECCSSCHHHHHHHH
T ss_pred -------------------eccccccccCCCCCcceEEEECCCCChhhcC-----CCCcCceEEEEeCCCCCHHHHHHHH
Confidence 1123567899999999999999999999997 7899999999999999999999999
Q ss_pred HHcCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhhhCCCCCCCc
Q 005347 190 FEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPS 269 (701)
Q Consensus 190 ~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~~~IP~ 269 (701)
+++||+|||+|+++.. . .+|++ +++ ..++||+
T Consensus 135 ~~~GA~gvIi~~~~~~--~-------------------~~g~~----~~~-----------------------~~~~IP~ 166 (421)
T 2ek8_A 135 AKQGAKAVIIYNNTDG--K-------------------LNGTL----GGS-----------------------DASFVAA 166 (421)
T ss_dssp HHTTCSEEEEECSSSS--C-------------------CCCBC----SSC-----------------------CTTCCEE
T ss_pred HHCCCeEEEEEeCCCc--c-------------------ccccc----CCC-----------------------CCCCccE
Confidence 9999999999987521 0 11111 111 2578999
Q ss_pred cccCHHHHHHHHHHhCCCCCCcccccCCCCCccccCCCCeEEEEEEeeeeeeeeeeeEEEEecCCCC---CCcEEEEEec
Q 005347 270 LPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYVMATIQNVIGIIPGTEE---PDRLVILGNH 346 (701)
Q Consensus 270 ~~is~~~a~~Ll~~l~g~~~~~~w~~~~~~~~~~~Gp~~~~v~l~~~~~~~~~~~~NVia~i~G~~~---~~~~Ivl~aH 346 (701)
++||.++++.|++.+.+.. .| ++.++++++. .+..+++||||+++|++. +++.||+++|
T Consensus 167 ~~Is~~~a~~L~~~l~~~~---------------~g--~~~v~l~~~~-~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH 228 (421)
T 2ek8_A 167 VGITKQEGDALAANLRAGE---------------KI--TATVKVAGAE-VKTLTSHNVIATKKPDANKKNTNDIIIIGSH 228 (421)
T ss_dssp EEECHHHHHHHHHHHHTTC---------------CC--EEEEEEESCE-EEEEEEEEEEEEECCCSSTTCCCCEEEEEEE
T ss_pred EEeCHHHHHHHHHHhhhhc---------------cC--Cccccccccc-cccccccceEEEecCcccCCCCCCEEEEecc
Confidence 9999999999999883110 01 3467777777 677889999999999743 6899999999
Q ss_pred cCCcCC--CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCc
Q 005347 347 RDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSA 424 (701)
Q Consensus 347 ~Ds~~~--GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~ 424 (701)
+|||+. ||.||++|+|++||+||.|.+. +|+|+|+|++|++||.|+.||++|++++...+.++++++||+||+
T Consensus 229 ~D~v~~g~Ga~D~~~G~a~~le~~~~l~~~-----~~~~~i~~~~~~~EE~g~~Gs~~~~~~~~~~~~~~~~~~in~D~~ 303 (421)
T 2ek8_A 229 HDSVEKAPGANDDASGVAVTLELARVMSKL-----KTDTELRFITFGAEENGLIGSKKYAASLSEDEIKRTIGMFQLDMV 303 (421)
T ss_dssp CCCCTTCCCTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEESSSTTTSHHHHHHHTTCCHHHHHHEEEEEEECSC
T ss_pred cccCCCCCCCCCCcHhHHHHHHHHHHHhcc-----CCCceEEEEEECCccccchhHHHHHHhCccchhhcEEEEEEeccc
Confidence 999987 9999999999999999998763 689999999999999999999999998766667899999999999
Q ss_pred ccCC--ccc---cccCh-hHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeee
Q 005347 425 VHEA--GFH---ASATP-QLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSF 498 (701)
Q Consensus 425 g~g~--~~~---~~~~p-~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~ 498 (701)
|.+. .+. ..+++ .........++....| .....+ .+|||.+|.+ .|||++.+..
T Consensus 304 g~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------------------~~~~~~-~~SD~~~F~~-~GIP~~~~~~ 363 (421)
T 2ek8_A 304 GSKDAGDLIMYTIDGKKNRVTDLGAAASSRLSGV------------------LPYGQE-GRSDHESFHA-LGIPAALFIH 363 (421)
T ss_dssp CBTTSCEEEEEETTSCCCHHHHHHHHHHHHHTSC------------------CCEEEC-CSSTHHHHHT-TTCCEEEEEE
T ss_pred CCCCCcceEEecCCCccccchhhHHHHHHhcCCC------------------CCCCCC-CCCccHHHHH-CCCCEEEEEC
Confidence 8752 222 12222 2233333333332211 112233 7899999997 7999998764
Q ss_pred CCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCCCCCChhHHHH
Q 005347 499 GTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLPFNYLSYAF 555 (701)
Q Consensus 499 ~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP~d~~~y~~ 555 (701)
...+++|||++||+++++ +.....++++++.++++||+.+++||+...|+.
T Consensus 364 ~~~~~~yHt~~Dt~~~i~------~~~l~~~~~~~~~~~~~la~~~~~p~~~~~y~~ 414 (421)
T 2ek8_A 364 APVEPWYHTPNDTLDKIS------KEKLDNVADIVGSAVYQAARPGELVIEPIDYPR 414 (421)
T ss_dssp ESCCTTTTSTTCCGGGBC------HHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCB
T ss_pred CcCCCCCCCcccchhhCC------HHHHHHHHHHHHHHHHHHhCCCccCCChhhhhh
Confidence 334579999999998873 344568899999999999999999999988864
No 4
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=100.00 E-value=1.6e-52 Score=466.60 Aligned_cols=395 Identities=20% Similarity=0.251 Sum_probs=300.7
Q ss_pred CCChhHHHHHHHHhhc--CCCCCCCHhhHHHHHHHHHHHHHCCC-ceeeeeeEEEEeeccccceEEecCCCCCceEeeec
Q 005347 38 LSDNVSISHHLHTLTR--RPHVAGSEANAEAAAYVLSVFTSCSL-ESHIASYGVSLTYPVSRSLSLTRPPPQPPITFALR 114 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~--~~r~aGs~g~~~~a~yi~~~~~~~Gl-~~~~~~y~v~~~~p~~~~l~l~~~~g~~~~~~~l~ 114 (701)
.++.+++.++|++|+. .+|++||+|++++++||.++|+++|+ +++.++|.+..|.+...+++++.|.+. .+..
T Consensus 17 ~~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~q~f~~~~w~~~~~~~~~~~~~~~---~~~~- 92 (444)
T 3iib_A 17 AQSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYKEPVTVPVWRRGIAKASILSPFPQ---PLVV- 92 (444)
T ss_dssp HHHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEEEEEESSCE---EECE-
T ss_pred HhcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEeeeEEeccEEecceEEEEeCCCCc---eEEE-
Confidence 5677899999999995 38999999999999999999999999 589999998888877777777654332 1110
Q ss_pred ccccCCCCCCCCCCcccccccccCCCcceEeeEEEecCCChhchHHHHh-cCCcccceEEEEEeCCCc---------hhh
Q 005347 115 QEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLKE-MVVNVTGTVVLARYGQIF---------RGD 184 (701)
Q Consensus 115 e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~-~gv~v~GkIvlv~~g~~~---------~~~ 184 (701)
...++.+.+|+|+++|+||+++ +++.+.+ .+.+|+|||||++.+.+. ...
T Consensus 93 ---------------~~l~~s~~tp~~~vta~lV~v~-----~~~~~~~~~~~dvkGKIVlv~~~~~~~~~~~~y~~~~~ 152 (444)
T 3iib_A 93 ---------------TALGGSIATPAQGLSATIVRFD-----TLQDLQNAEAGSLNDKIAFIDAKTERHRDGKGYGQTAS 152 (444)
T ss_dssp ---------------EECBTCCCCCTTCEEEEEEEES-----SHHHHHTSCTTTTTTCEEEECCCCCCCTTCHHHHHHHH
T ss_pred ---------------EeccCCCCCCCCCeEEEEEecC-----CHHHHhhccccccCccEEEEeCCCCCCcccccccchhh
Confidence 0012233347899999999995 3444433 256999999999887663 123
Q ss_pred H----HHHHHHcCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhh
Q 005347 185 I----VHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEK 260 (701)
Q Consensus 185 k----~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~ 260 (701)
| +.+|+++||+|+|++++..+... . |.+ |.+ +++
T Consensus 153 kr~~~a~~A~~aGA~avIi~~~~~~~~~-------~------~~t----g~~----------~~~--------------- 190 (444)
T 3iib_A 153 GRSRGAVAAAEKGAVGIIIRSIGTDHDR-------M------AHT----GMM----------RYE--------------- 190 (444)
T ss_dssp HHHHHHHHHHHTTCSEEEEECSCSCCSS-------C------CCC----CBC----------CCC---------------
T ss_pred hhhhHHHHHHHCCCeEEEEEccCCcccc-------c------ccC----Ccc----------ccC---------------
Confidence 3 56799999999999986432110 1 111 110 111
Q ss_pred hCCCCCCCccccCHHHHHHHHHHhCCCCCCcccccCCCCCccccCCCCeEEEEEEeeeee-eeeeeeEEEEecCCCCCCc
Q 005347 261 AGNVPLIPSLPISAKDGETIMRSIGGEVANEDWQGDKDAPIYRVGPGPGVVNLSYTGEYV-MATIQNVIGIIPGTEEPDR 339 (701)
Q Consensus 261 ~~~~~~IP~~~is~~~a~~Ll~~l~g~~~~~~w~~~~~~~~~~~Gp~~~~v~l~~~~~~~-~~~~~NVia~i~G~~~~~~ 339 (701)
...++||+++||.++|++|++++.+ |+ +++++++++.... ..+++||||+|+|.+++++
T Consensus 191 -~~~~~IP~~~Is~~da~~L~~~l~~------------------g~-~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~ 250 (444)
T 3iib_A 191 -EGVTAIPAAAISNPDADLINAMLKR------------------DK-EVVISLELGSERRGETTSYNVIAEVKGSTKADE 250 (444)
T ss_dssp -TTSCCCCEEEECHHHHHHHHHHHTT------------------TC-CCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEE
T ss_pred -CCCCCCCeEEecHHHHHHHHHHHhC------------------CC-CeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCC
Confidence 1357899999999999999999864 22 4578888877654 7899999999999876689
Q ss_pred EEEEEeccCCcCC--CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEE
Q 005347 340 LVILGNHRDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVA 417 (701)
Q Consensus 340 ~Ivl~aH~Ds~~~--GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va 417 (701)
+||++||+|||+. ||+||++|++++||+||.|+++ +|+|+|+|+|++|++||.|++||++|++++... .+++++
T Consensus 251 ~i~~~aH~Ds~~~g~Ga~D~~sG~a~~le~a~~l~~~---~~~~~~~i~f~~~~~EE~gl~Gs~~~~~~~~~~-~~~~~~ 326 (444)
T 3iib_A 251 IVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHILDL---PQKPERTIRVVLYAAEELGLLGGKTYAKEHEAE-LEKHYI 326 (444)
T ss_dssp EEEEEEECCCCSSSCCTTTTHHHHHHHHHHHHHHHTS---SSCCSEEEEEEEESCGGGTSHHHHHHHHHTGGG-GGGEEE
T ss_pred EEEEEeecccCCCCCCCccchHHHHHHHHHHHHHHhc---CCCCCCeEEEEEECCcccCCcCHHHHHHhhHhh-hhceeE
Confidence 9999999999984 9999999999999999998754 689999999999999999999999999998655 468999
Q ss_pred EEEecCcccC-CccccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEe
Q 005347 418 YLNIDSAVHE-AGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADM 496 (701)
Q Consensus 418 ~iNlD~~g~g-~~~~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~ 496 (701)
+||+||.+.. ..+...+.+....+++...+... +.. + .+.....+ ++|||.+|.+ .|||++.+
T Consensus 327 ~~n~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g----~---------~~~~~~~~-~~SD~~~f~~-~GiP~~~l 390 (444)
T 3iib_A 327 AAESDFGAGPIYQIDWRVADTAHSPVINAMKVAE-PLG----V---------AAGNNKAS-GGPDVSMLPA-LGVPVASL 390 (444)
T ss_dssp EEECCSTTCCEEEEEEECCHHHHHHHHHHGGGGG-GGT----C---------EECCSCCC-CCGGGTTSGG-GTCCEEEE
T ss_pred EEECcCCCCcceEEEeecChhhHHHHHHHHHHHh-hcC----C---------ccccCCCC-CCCccHHHHH-CCCCEEEe
Confidence 9999997654 34555677777777776655331 111 0 00112233 7899999998 69999999
Q ss_pred eeCC--CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCC
Q 005347 497 SFGT--GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEE 544 (701)
Q Consensus 497 ~~~~--~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~ 544 (701)
...+ .+++|||++||+++++ +..+...++++..+++.||+.+
T Consensus 391 ~~~~~~~~~~yHt~~Dt~d~id------~~~l~~~~~~~~~~v~~lA~~~ 434 (444)
T 3iib_A 391 RQDGSDYFDYHHTPNDTLDKIN------PEALAQNVAVYAQFAWVMANSK 434 (444)
T ss_dssp EECCTTGGGTTTSTTCCGGGSC------HHHHHHHHHHHHHHHHHHHHCC
T ss_pred ecCCCcCCCCCCCCccccccCC------HHHHHHHHHHHHHHHHHHhcCC
Confidence 8743 2479999999999873 4567788999999999999865
No 5
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=100.00 E-value=5.9e-33 Score=295.54 Aligned_cols=218 Identities=19% Similarity=0.170 Sum_probs=162.5
Q ss_pred eeeeeeEEEEecCCCCCCcEEEEEeccCCcC-------CCCCCCchHHHHHHHHHHHHHHhHHc--CCCCCCcEEEEeeC
Q 005347 321 MATIQNVIGIIPGTEEPDRLVILGNHRDAWT-------FGAVDPNSGTAALLEVAQRLNKLQKR--GWKPRRTIVLCNWD 391 (701)
Q Consensus 321 ~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-------~GA~DnasG~A~lLElAr~l~~~~~~--g~~p~rtI~F~~~~ 391 (701)
..+..||||+++|.. +++|||+||||||+ .||+|||||||+|||+||.|+++.++ +++|+|+|+|++|+
T Consensus 63 ~~~~~Nii~~~~~~~--~~~vvl~aHyDs~~~~~~~~~~GA~DnaSGvA~lLElAR~l~~~~~~~~~~~p~~tI~fv~fd 140 (312)
T 4f9u_A 63 ELTFANVVGTINPQA--QNFLALACHYDSKYFPNDPGFVGATDSAVPCAILLNTAKTLGAYLQKEFRNRSDVGLMLIFFD 140 (312)
T ss_dssp EEEEEEEEEEESTTS--SEEEEEEEECCCCCCTTCTTCCCTTTTHHHHHHHHHHHHHTHHHHTTGGGSCSSEEEEEEEES
T ss_pred ceeEEEEEEEECCCC--CceEEEEEEEecCCCCCCCCCCCccCCcccHHHHHHHHHHHHHHHHhhccCCCCceEEEEEec
Confidence 457789999999964 78999999999985 39999999999999999999987644 46899999999999
Q ss_pred cccCC--------CcchHHHHHHHHHh-----------hhccEEEEEEecCcccC-Ccc--ccccChhHHHHHHHHHHHc
Q 005347 392 AEEYG--------LIGSTEWVEENREM-----------LASRAVAYLNIDSAVHE-AGF--HASATPQLDELLKQAAKQV 449 (701)
Q Consensus 392 ~EE~G--------l~GS~~~~~~~~~~-----------l~~~~va~iNlD~~g~g-~~~--~~~~~p~l~~~~~~~~~~v 449 (701)
|||.| |+||++|++++... ..+++.++||+||+|.. ..+ ...++..+...+.+..+.+
T Consensus 141 aEE~G~~~~~~~~L~GS~~~a~~~~~~~~~~~~~~~~~~~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~i~~~~ 220 (312)
T 4f9u_A 141 GEEAFKEWTDADSVYGSKHLAAKLASKRSGSQAQLAPRNIDRIEVLVLLDLIGARNPKFSSFYENTDGLHSSLVQIEKSL 220 (312)
T ss_dssp CCSCSSSCSSSSSCHHHHHHHHHHHHCBC-------CBGGGGEEEEEEEESCCSSSCCEEECCGGGHHHHHHHHHHHHHH
T ss_pred CccccccCCccccccChHHHHHHHHhhccccccccccccccceeeeeeeeccccCCCCceEEEeccchhhhHHHHHHHHH
Confidence 99988 99999999998653 23689999999999876 332 2233333333333333322
Q ss_pred CCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHH
Q 005347 450 QDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAA 529 (701)
Q Consensus 450 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~ 529 (701)
..... ...+.... .+..... ..+|||.||++ .|||++++......++|||+.||+++|+ +..+..+
T Consensus 221 ~~~~~--~~~~~~~~----~~~~~~~-~~~SDH~pF~~-~GIP~l~~~~~~~~~~yHt~~Dt~d~id------~~~l~~~ 286 (312)
T 4f9u_A 221 RTAGQ--LEGNNNMF----LSRVSGG-LVDDDHRPFLD-ENVPVLHLVATPFPDVWHTPRDNAANLH------WPSIRNF 286 (312)
T ss_dssp HHTTC--SSSSCCCE----EEEECSS-CCCCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGCC------HHHHHHH
T ss_pred HHhcc--cccccccc----ccccCCC-CCCCchHHHHH-CCCCEEEEECCCCCCCCCCCccChhhCC------HHHHHHH
Confidence 11000 00000000 0111122 26899999998 6999999987665678999999999983 4567789
Q ss_pred HHHHHHHHHHhcCCCCCCCChhHHH
Q 005347 530 ASMWGLVALQLADEEFLPFNYLSYA 554 (701)
Q Consensus 530 a~~~~~l~~~La~~~~lP~d~~~y~ 554 (701)
++++..++++..+.+.+|+|.+-|+
T Consensus 287 ~~i~~~fv~e~l~~~~~P~d~~~y~ 311 (312)
T 4f9u_A 287 NRVFRNFVYQYLKRHTSPVNLRFYR 311 (312)
T ss_dssp HHHHHHHHHHHHHHCCSCCCCCC--
T ss_pred HHHHHHHHHHHHhCCCCCCchhhhc
Confidence 9999999999999999999998775
No 6
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=99.97 E-value=9.8e-31 Score=280.16 Aligned_cols=210 Identities=20% Similarity=0.168 Sum_probs=145.9
Q ss_pred eeeeeeEEEEecCCCCCCcEEEEEeccCCcC------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCccc
Q 005347 321 MATIQNVIGIIPGTEEPDRLVILGNHRDAWT------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEE 394 (701)
Q Consensus 321 ~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE 394 (701)
..+..||||+++|.. +++|||+||||||+ .||+|||||||+|||+||.|++.++.+++|+|+|+|++|+|||
T Consensus 90 ~~~~~Nii~~~~~~~--~~~i~l~aHyDs~~~~~~~~~GA~DnasG~A~lLE~Ar~l~~~~~~~~~p~rtI~fv~fdgEE 167 (330)
T 4fai_A 90 KLHFHNIIATLNPNA--ERYLVLSCHYDSKYMPGVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKKSKLSLMLLFFDGEE 167 (330)
T ss_dssp EEEEEEEEEESCTTC--SEEEEEEEECCCCCCTTSCCCCTTTTHHHHHHHHHHHHHTHHHHGGGGTSSEEEEEEEESCCS
T ss_pred ceeEEEEEEEECCCC--CcEEEEEEeecccccccCCCCCCCCccHhHHHHHHHHHHHHHhhhccCCCCccEEEEEecccc
Confidence 356789999999864 78999999999985 3999999999999999999999888889999999999999999
Q ss_pred CCC--------cchHHHHHHHHHh-hhccEEEEEEecCcccC-Cccc--cccChhHHHHHHHHHHHcCCCCC------C-
Q 005347 395 YGL--------IGSTEWVEENREM-LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAAKQVQDPDN------S- 455 (701)
Q Consensus 395 ~Gl--------~GS~~~~~~~~~~-l~~~~va~iNlD~~g~g-~~~~--~~~~p~l~~~~~~~~~~v~~p~~------~- 455 (701)
.|+ +||++|++++... ..++++++||+||+|.+ ..+. ...+......+....+.+..... .
T Consensus 168 ~Gl~~~~~~~llGS~~~a~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 4fai_A 168 AFEEWGPKDSIYGARHLAKKWHHEGKLDRIDMLVLLDLLGAPDPAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSG 247 (330)
T ss_dssp CSSSCBTTBSCHHHHHHHHHHHHTTCSTTEEEEEEECSCSSSSCCEEECCGGGHHHHHHHHHHHHHHHHTTC--------
T ss_pred ccccccccchhhhhHHHHhcchhccchhceeEEEEeccCccCCCCceeeccCcchHHHHHHHHHHHhhhhhhhhhhhccc
Confidence 995 7999999986553 35789999999999976 3332 22232322222222211100000 0
Q ss_pred -cchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHH
Q 005347 456 -SQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWG 534 (701)
Q Consensus 456 -~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~ 534 (701)
.......+.. ......++.+|||.||++ .|||++++...+..++|||+.||+++|+ +.....+++++.
T Consensus 248 ~~~~~~~~~~~----~~~~~~~~~~SDH~pF~~-~GIP~l~~i~~~~~~~yHT~~Dt~d~iD------~~tl~~~~~ii~ 316 (330)
T 4fai_A 248 VAQRDPTRYFQ----SQAMRSSFIEDDHIPFLR-RNVPILHLIPVPFPSVWHTPDDNASVID------YATTDNLALIIR 316 (330)
T ss_dssp -------CCEE----EEEETTCCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTSSGGGCC------HHHHHHHHHHHH
T ss_pred ccccccccccc----ccCCCCCCCCCchHHHHH-CCCCEEEEECCCCCCCCCCCcCChhhCC------HHHHHHHHHHHH
Confidence 0000000000 001111226799999998 6999999975555679999999999884 344556777777
Q ss_pred HHHHH--hcCC
Q 005347 535 LVALQ--LADE 543 (701)
Q Consensus 535 ~l~~~--La~~ 543 (701)
.++++ +++.
T Consensus 317 ~Fv~EyL~~~~ 327 (330)
T 4fai_A 317 LFALEYLLAGT 327 (330)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhhCC
Confidence 66643 5543
No 7
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=5e-29 Score=264.82 Aligned_cols=188 Identities=23% Similarity=0.263 Sum_probs=138.7
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcC---------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~---------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F 387 (701)
+..||||+++|.. ++.|||+|||||++ .||+||+||||+|||+||.|++. +|+|+|+|
T Consensus 81 ~~~Nii~~~~g~~--~~~i~l~aH~Ds~~~~~~~~~~~~~~~~~~GA~D~aSG~a~lLE~ar~l~~~-----~~~~~i~~ 153 (309)
T 4fuu_A 81 KARNIIGSYKPES--KKRIALFAHWDTRPWADNDADEKNHHTPILGANDGASGVGALLEIARLVNQQ-----QPELGIDI 153 (309)
T ss_dssp EEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEEE
T ss_pred eeEEEEEEECCCC--CceEEEEeecCCCCCCCCccccccccCCcCCcccCchhHHHHHHHHHHHhhc-----CCCCceEE
Confidence 4679999999975 68999999999974 39999999999999999999863 89999999
Q ss_pred EeeCcccCCC--------------cchHHHHHHHHHhhhccEEEEEEecCcccC-Ccccccc-----ChhHHHHHHHHHH
Q 005347 388 CNWDAEEYGL--------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASA-----TPQLDELLKQAAK 447 (701)
Q Consensus 388 ~~~~~EE~Gl--------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~~~-----~p~l~~~~~~~~~ 447 (701)
++|+|||.|+ +||++|++++... ..++.++||+||+|.+ ..+...+ .+.+.+.+.+..+
T Consensus 154 ~~~~~EE~Gl~~~~~~~~~~~~~l~GS~~~~~~~~~~-~~~i~~~inlDmvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (309)
T 4fuu_A 154 IFLDAEDYGTPQFYEGKHKEEAWCLGSQYWSRNPHVQ-GYNARFGILLDMVGGENSVFLKEGYSEEFAPDINKKVWKAAK 232 (309)
T ss_dssp EEECSSSCCCCTTCCSCCCGGGSCHHHHHHHHSCSST-TCCCSEEEEECSCCBTTCCEEECHHHHHHCHHHHHHHHHHHH
T ss_pred EeecccccCccccccchhhhhhhhcchhHHHhccccc-CcceEEEEeeeccCCCCCceEeecCchhhhHHHHHHHHHHHH
Confidence 9999999995 8999999876543 5789999999999976 3333221 2333333444433
Q ss_pred HcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeC----CCCCcCCCCcccHHHHHhhCCCch
Q 005347 448 QVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG----TGYPVYHSMYDDFIWMEKFGDPTF 523 (701)
Q Consensus 448 ~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~----~~~~~yHT~~Dt~~~i~~~~dp~~ 523 (701)
...... .+ .....+..+|||.||.++.|||++++.+. +.+++|||++||+++|+ +
T Consensus 233 ~~~~~~-----~~----------~~~~~~~~~sDh~~F~~~~GIP~l~~~~~~~~~~~~~~yHT~~Dt~d~id----~-- 291 (309)
T 4fuu_A 233 KAGYGK-----TF----------IDERGDTITDDHLFINRLARIKTIDIIPNDPETGFPPTWHTIHDNMDHID----K-- 291 (309)
T ss_dssp HTTCTT-----TE----------EEEECCCCCCHHHHHHHHTCCCEEEECBC----CCCTTTTSTTCSGGGBC----H--
T ss_pred hcCCcc-----cc----------cccCCCCCCCChHHHHhcCCCCEEEEeccCCCCCCCCCCCCcccchhhCC----H--
Confidence 321100 00 00111226799999997679999998653 23579999999999883 3
Q ss_pred HHHHHHHHHHHHHHHH
Q 005347 524 QRHVAAASMWGLVALQ 539 (701)
Q Consensus 524 ~~~~~~a~~~~~l~~~ 539 (701)
..++.+++++..+++.
T Consensus 292 ~~L~~vg~~vl~~ly~ 307 (309)
T 4fuu_A 292 NTLKAVGQTVLEVIYN 307 (309)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4466777777777653
No 8
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=99.95 E-value=2e-27 Score=253.10 Aligned_cols=203 Identities=21% Similarity=0.175 Sum_probs=146.2
Q ss_pred eeeeeeEEEEecCCCCCCcEEEEEeccCCcC--------CCCCCCchHHHHHHHHHHHHHHhHHc--CCCCCCcEEEEee
Q 005347 321 MATIQNVIGIIPGTEEPDRLVILGNHRDAWT--------FGAVDPNSGTAALLEVAQRLNKLQKR--GWKPRRTIVLCNW 390 (701)
Q Consensus 321 ~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~--------~GA~DnasG~A~lLElAr~l~~~~~~--g~~p~rtI~F~~~ 390 (701)
..+..||||+++|.. ++.||++||+||.+ .||+||+||||++||+||.|.+..+. +.+|+|+|+|++|
T Consensus 93 ~~~~~Nvia~~~g~~--~~~ivl~aH~Dsv~~~~g~~~~~GA~D~asGva~lLe~ar~l~~~~~~~~~~~~~~~i~fv~~ 170 (330)
T 3pb6_X 93 PVDFGNVVATLDPRA--ARHLTLACHYDSKLFPPGSTPFVGATDSAVPCALLLELAQALDLELSRAKKQAAPVTLQLLFL 170 (330)
T ss_dssp EEEEEEEEEESCTTS--SEEEEEEEECCCCCCCTTSCCCCCTTTTHHHHHHHHHHHHHTHHHHHHHHHTTCSEEEEEEEE
T ss_pred CccceEEEEEECCCC--CceEEEEeccCCCCCCCCCcCcCCCcCChHHHHHHHHHHHHHHHHHhhcccCCCCCcEEEEEE
Confidence 456799999999974 68999999999964 49999999999999999999886432 3589999999999
Q ss_pred CcccC--------CCcchHHHHHHHHHh-------hhccEEEEEEecCcccC-Cccc--cccChhHHHHHHHHHHHc---
Q 005347 391 DAEEY--------GLIGSTEWVEENREM-------LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAAKQV--- 449 (701)
Q Consensus 391 ~~EE~--------Gl~GS~~~~~~~~~~-------l~~~~va~iNlD~~g~g-~~~~--~~~~p~l~~~~~~~~~~v--- 449 (701)
+|||. |++||++|++++... ..++|.++||+||+|.. +.+. ...+..+...+.+..+.+
T Consensus 171 ~~EE~f~~w~~~~gl~GS~~~a~~~~~~~~~~~~~~~~~i~~~inlDmiG~~~~~~~~~~~~t~~~~~~l~~i~~~~~~~ 250 (330)
T 3pb6_X 171 DGEEALKEWGPKDSLYGSRHLAQLMESIPHSPGPTRIQAIELFMLLDLLGAPNPTFYSHFPRTVRWFHRLRSIEKRLHRL 250 (330)
T ss_dssp SCCSCSSCCSTTSSCHHHHHHHHHHHHSBCSSCSBTTTTEEEEEEEESCSSSSCCBCCCCGGGHHHHHHHHHHHHHHHHT
T ss_pred cCcccccccCCCCCCccHHHHHHHHHhcCCccccchhhCeEEEEeccCCCCCCCCceeecCcchHHHHHHHHHHHHHHHc
Confidence 99999 999999999876652 45899999999999986 3332 122222222333222211
Q ss_pred CCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHH
Q 005347 450 QDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAA 529 (701)
Q Consensus 450 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~ 529 (701)
..-. .......|+. +. ...+..+|||.||++ .|||++++......++|||+.||+++|+ +..+..+
T Consensus 251 g~~~--~~p~~~~~f~----~~-~~~~~~~SDH~pF~~-~GIP~~~~~~~~f~~~yHt~~Dt~d~id------~~~l~~~ 316 (330)
T 3pb6_X 251 NLLQ--SHPQEVMYFQ----PG-EPFGSVEDDHIPFLR-RGVPVLHLISTPFPAVWHTPADTEVNLH------PPTVHNL 316 (330)
T ss_dssp TCCS--SCCSSCSSBC----SS-CSSCCCSCTTHHHHT-TTCCEEEEECSSCCTTTTSTTCSGGGSC------HHHHHHH
T ss_pred Cccc--cCCccccccc----cc-ccCCCCCCchHhHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCC------HHHHHHH
Confidence 1000 0000001111 00 122337899999998 7999999986555579999999999884 5566778
Q ss_pred HHHHHHHHHH
Q 005347 530 ASMWGLVALQ 539 (701)
Q Consensus 530 a~~~~~l~~~ 539 (701)
++++..++++
T Consensus 317 ~~i~~~fv~E 326 (330)
T 3pb6_X 317 CRILAVFLAE 326 (330)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777765
No 9
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.95 E-value=1.9e-27 Score=254.80 Aligned_cols=205 Identities=20% Similarity=0.207 Sum_probs=145.3
Q ss_pred eeeeeEEEEecCCCCCCcEEEEEeccCCcC---------CCCCCCchHHHHHHHHHHHHHHhHHc-----CCCCCCcEEE
Q 005347 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------FGAVDPNSGTAALLEVAQRLNKLQKR-----GWKPRRTIVL 387 (701)
Q Consensus 322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~---------~GA~DnasG~A~lLElAr~l~~~~~~-----g~~p~rtI~F 387 (701)
.+..||||+++|. +++.||++||+||++ .||+||++|+|++||+||.|.+..++ |++|+|+|+|
T Consensus 86 ~~~~Nvi~~~~g~--~~~~i~l~aH~Dsv~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~~~~~~~~~~g~~~~~~i~~ 163 (329)
T 2afw_A 86 RSFSNIISTLNPT--AKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQL 163 (329)
T ss_dssp EEEEEEEEESSTT--SSEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEEEE
T ss_pred ceEeEEEEEECCC--CCcEEEEEEeccCCCcCcccCcCCCCcccchhhHHHHHHHHHHHHHHHhhhcccccCCCCccEEE
Confidence 4689999999986 478999999999954 59999999999999999999886432 5789999999
Q ss_pred EeeCcccC--------CCcchHHHHHHHHHh----------hhccEEEEEEecCcccC-Cccc--cccChhHHHHHHHHH
Q 005347 388 CNWDAEEY--------GLIGSTEWVEENREM----------LASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQAA 446 (701)
Q Consensus 388 ~~~~~EE~--------Gl~GS~~~~~~~~~~----------l~~~~va~iNlD~~g~g-~~~~--~~~~p~l~~~~~~~~ 446 (701)
++|++||. |+.||++|++++... +.++++++||+||+|.+ +.+. ...+..+...+.++.
T Consensus 164 ~~~~~EE~~~~~~~~~gl~Gs~~~~~~~~~~~~p~~~~~~~~~~~i~~~inlD~iG~~~~~~~~~~~~~~~~~~~l~~~~ 243 (329)
T 2afw_A 164 IFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQAIE 243 (329)
T ss_dssp EEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGHHHHHHHHHHH
T ss_pred EEecCcccccccCCCccchhHHHHHHHHHhCCCcccccccccccceEEEEEeccCCCCCCceeeeccCcchHHHHHHHHH
Confidence 99999998 999999999987643 35789999999999976 4332 112222333343333
Q ss_pred HHcCCCCC-CcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHH
Q 005347 447 KQVQDPDN-SSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQR 525 (701)
Q Consensus 447 ~~v~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~ 525 (701)
+.+..... ...+.+..|+... ...+..+|||.||++ .|||++++.....+++|||++||+++|+ +..
T Consensus 244 ~~~~~~g~~~~~~~~~~~f~~~-----~~~g~~~sDh~~F~~-~GiP~~~~~~~~~~~~yHt~~Dt~~~ld------~~~ 311 (329)
T 2afw_A 244 HELHELGLLKDHSLEGRYFQNY-----SYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEENLD------EST 311 (329)
T ss_dssp HHHHHTTCSSSCCSTTCSBCSC-----CCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTTCC------HHH
T ss_pred HHHHHcCCccCCCccccccccc-----ccCCCCCCCCHhHHH-CCCCEEEEEcCCCCCCCCCCCCchhhCC------HHH
Confidence 32211100 0111222232110 111225799999999 5999999987656689999999999873 345
Q ss_pred HHHHHHHHHHHHHHh
Q 005347 526 HVAAASMWGLVALQL 540 (701)
Q Consensus 526 ~~~~a~~~~~l~~~L 540 (701)
+..+++++..++++.
T Consensus 312 l~~~~~~~~~~v~ey 326 (329)
T 2afw_A 312 IDNLNKILQVFVLEY 326 (329)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 667777777776653
No 10
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.95 E-value=7.6e-27 Score=245.12 Aligned_cols=197 Identities=29% Similarity=0.427 Sum_probs=155.3
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcCC--CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcch
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGS 400 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~--GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS 400 (701)
...||||+++|.. +++.|++++|+|+|+. ||.||.+|+|++||++|.|.+ .+++|+++|+|++|++||.|+.||
T Consensus 63 ~~~nvi~~~~g~~-~~~~i~l~aH~D~v~~g~Ga~D~~~g~a~~l~~~~~l~~---~~~~~~~~i~~~~~~~EE~g~~Gs 138 (284)
T 1tkj_A 63 TGYNLIANWPGGD-PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSR---AGYQPDKHLRFAWWGAEELGLIGS 138 (284)
T ss_dssp EEEEEEEECSCSE-EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEESCGGGTSHHH
T ss_pred CceeEEEEEeCCC-CCCEEEEEeecCCCCCCCCCccChHHHHHHHHHHHHHHh---cCCCCCceEEEEEECCcccCCcCH
Confidence 4689999999864 4689999999999986 899999999999999999875 467899999999999999999999
Q ss_pred HHHHHHHHHhhhccEEEEEEecCcccC-Ccccc-ccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCC
Q 005347 401 TEWVEENREMLASRAVAYLNIDSAVHE-AGFHA-SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGG 478 (701)
Q Consensus 401 ~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~-~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (701)
++|++++.....+++.++||+|++|.+ ..+.+ .++|.+.+.+.+.++....+. .....+..
T Consensus 139 ~~~~~~~~~~~~~~~~~~i~~D~~g~~~~~~~~~~~~~~l~~~~~~~~~~~gi~~-----------------~~~~~~~~ 201 (284)
T 1tkj_A 139 KFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDDPVIEKTFKNYFAGLNVPT-----------------EIETEGDG 201 (284)
T ss_dssp HHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCSSHHHHHHHHHHHHHHTCCC-----------------EECCSSTT
T ss_pred HHHHhhCccchhhcEEEEEEecCCCCCCCCeEEecCCHHHHHHHHHHHHHcCCCc-----------------ccCCCCCC
Confidence 999998776666899999999999875 23332 357888877777766543211 11122226
Q ss_pred CCchHhHHhcCCceEEEeeeCC-------------------CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHH
Q 005347 479 GSDYAAFIQHIGVPVADMSFGT-------------------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (701)
Q Consensus 479 ~SD~~~F~~~~GIPs~~~~~~~-------------------~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~ 539 (701)
+|||.+|.+ .|||++.+.... .+++|||++||+++++ +..+..+++++..++++
T Consensus 202 ~sD~~~f~~-~Gip~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~yHt~~D~~~~id------~~~l~~~~~~~~~~~~~ 274 (284)
T 1tkj_A 202 RSDHAPFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNIN------DTALDRNSDAAAHAIWT 274 (284)
T ss_dssp CSTHHHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSCC------HHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHH-CCCCEEEeecCcccccccchhhccccccccCCCCCCCCCcCChhhCC------HHHHHHHHHHHHHHHHH
Confidence 799999997 799999997651 2578999999988763 45567889999999999
Q ss_pred hcCCCCCC
Q 005347 540 LADEEFLP 547 (701)
Q Consensus 540 La~~~~lP 547 (701)
||+++.+|
T Consensus 275 la~~~~~P 282 (284)
T 1tkj_A 275 LSSGTGEP 282 (284)
T ss_dssp HHC-----
T ss_pred HhcCCCCC
Confidence 99999888
No 11
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.95 E-value=4.3e-27 Score=249.35 Aligned_cols=189 Identities=23% Similarity=0.240 Sum_probs=141.6
Q ss_pred eeeeeEEEEecCCCCCCcEEEEEeccCCcC---------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEE
Q 005347 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIV 386 (701)
Q Consensus 322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~---------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~ 386 (701)
....||||+++|.. ++.||++||+|||+ .||+||++|+|++||+||.|.+. +|+|+|+
T Consensus 80 ~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~Ga~D~~sGva~~Le~ar~l~~~-----~~~~~i~ 152 (309)
T 3tc8_A 80 LEARNIIGSFDPEN--SKRVLLFAHWDSRPYSDHDPDPSKHRTPLDGADDGGSGVGALLEIARQIGQK-----APGIGID 152 (309)
T ss_dssp EEEEEEEEEESTTC--SSEEEEEEECCCCSCCTTCSSGGGTTSCCCCTTTTHHHHHHHHHHHHHHHHS-----CCSSEEE
T ss_pred ccceEEEEEECCCC--CceEEEEecccCCCCCCCCccccCCCccccCcccchHhHHHHHHHHHHHHhC-----CCCCcEE
Confidence 46799999999963 68999999999997 49999999999999999999875 5899999
Q ss_pred EEeeCcccCCC-------------cchHHHHHHHHHhhhccEEEEEEecCcccC-CccccccC-----hhHHHHHHHHHH
Q 005347 387 LCNWDAEEYGL-------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASAT-----PQLDELLKQAAK 447 (701)
Q Consensus 387 F~~~~~EE~Gl-------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~~~~-----p~l~~~~~~~~~ 447 (701)
|++|++||.|+ +||++|++++... ..+++++||+||+|.+ ..+...+. +.+.+.+.+.++
T Consensus 153 f~~~~~EE~Gl~~~~~~~~~ds~~~GS~~~~~~~~~~-~~~~~~~inlD~~G~~~~~~~~~~~~~~~~~~l~~~~~~~a~ 231 (309)
T 3tc8_A 153 IIFFDAEDYGTPEFVTDYTPDSWCLGTQFWAKNPHVP-NYTAEYGILLDMVGGKNATFFKEQQSLRAAAPIVEMVWSAAR 231 (309)
T ss_dssp EEEECSCSCSCCTTCCSCCTTCSCHHHHHHHHSCSST-TCCCSEEEEEESCCBTTCCEEECHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECccccccccccccccccccchhHHHHHhCCCcc-ccceEEEEEecccCCCCCceeecccccchHHHHHHHHHHHHH
Confidence 99999999999 9999999865433 5789999999999986 44433221 122333333343
Q ss_pred HcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeC------CCCCcCCCCcccHHHHHhhCCC
Q 005347 448 QVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG------TGYPVYHSMYDDFIWMEKFGDP 521 (701)
Q Consensus 448 ~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~------~~~~~yHT~~Dt~~~i~~~~dp 521 (701)
.+..+ ..|. ....+..+|||.||.+..|||++++... ...++|||+.||+++|+
T Consensus 232 ~~g~~-----~~f~----------~~~~g~~~sDh~~f~~~~GiP~~~li~~~~~~~~~~~~~~Ht~~Dt~d~id----- 291 (309)
T 3tc8_A 232 DLGYG-----KYFI----------NAAGGAITDDHQYVISGRNIPSIDIINYDPESKTGFASYWHTQKDNMENID----- 291 (309)
T ss_dssp HHTCT-----TTEE----------EEECCCCCCHHHHHHHHHCCCEEEEEBCCTTSSSSSCTTTTSTTCSGGGBC-----
T ss_pred HcCCc-----ceec----------cCCCCCCCCccHHHHhcCCCCEEEEecccCcccCCCCCCCCCCcCChhhCC-----
Confidence 33211 1110 0112235899999998349999999653 23479999999999884
Q ss_pred chHHHHHHHHHHHHHHHH
Q 005347 522 TFQRHVAAASMWGLVALQ 539 (701)
Q Consensus 522 ~~~~~~~~a~~~~~l~~~ 539 (701)
+..+..+++++..+++.
T Consensus 292 -~~~l~~~~~~~~~~vy~ 308 (309)
T 3tc8_A 292 -RETLKAAGQTVLEVIYN 308 (309)
T ss_dssp -HHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhc
Confidence 45667788888888774
No 12
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.94 E-value=7.7e-27 Score=247.52 Aligned_cols=189 Identities=20% Similarity=0.214 Sum_probs=125.7
Q ss_pred eeeeeEEEEecCCCCCCcEEEEEeccCCcC---------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEE
Q 005347 322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIV 386 (701)
Q Consensus 322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~---------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~ 386 (701)
....||||+++|.. ++.|||+||+||++ .||+||++|+|++||+||.|.+. +|+|+|+
T Consensus 82 ~~~~Nvia~~~g~~--~~~ill~aH~Dsv~~~~~~p~~~~~~~~~~GA~D~~sGva~~Le~ar~l~~~-----~~~~~i~ 154 (314)
T 3gux_A 82 LKSRNIIGAYKPES--KKRILLCAHWDSRPYADNDPDPKNHHTPILGVNDGASGVGVLLEIARQIQKE-----QPALGID 154 (314)
T ss_dssp EEEEEEEEEESTTC--SSEEEEEEECCCCC--------------------CHHHHHHHHHHHHHHHHS-----CCSSEEE
T ss_pred ccceEEEEEECCCC--CceEEEEccccCCCcCCCCcccccCCcccCCCcccHHHHHHHHHHHHHHHhC-----CCCCcEE
Confidence 45799999999963 68999999999997 39999999999999999999874 5899999
Q ss_pred EEeeCcccCCC--------------cchHHHHHHHHHhhhccEEEEEEecCcccC-CccccccC-----hhHHHHHHHHH
Q 005347 387 LCNWDAEEYGL--------------IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASAT-----PQLDELLKQAA 446 (701)
Q Consensus 387 F~~~~~EE~Gl--------------~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~~~~-----p~l~~~~~~~~ 446 (701)
|++|++||.|+ +||++|++++.. ...+++++||+||+|.. ..+...+. +.+.+.+.+.+
T Consensus 155 fv~~~~EE~Gl~~~~~~~~~~ds~~~GS~~~~~~~~~-~~~~~~~~inlDm~G~~~~~~~~~g~~~~~~~~l~~~~~~~~ 233 (314)
T 3gux_A 155 IVFFDSEDYGIPEFYDGKYKQDTWCLGSQYWARTPHV-QNYNARYGILLDMVGGKDATFYYEGYSARTARSEMKKIWKKA 233 (314)
T ss_dssp EEEECSCCC-----------CTTSCHHHHHHHHSCSS-TTCCCSEEEEEESCCBTTCCEEECTTHHHHCHHHHHHHHHHH
T ss_pred EEEECCccccccccccccccccccchhHHHHHhCCcc-cccceeEEEEEeccCCCCCceeeeccccccHHHHHHHHHHHH
Confidence 99999999999 999999986543 35789999999999986 44433332 33444444444
Q ss_pred HHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCC-------CCCcCCCCcccHHHHHhhC
Q 005347 447 KQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGT-------GYPVYHSMYDDFIWMEKFG 519 (701)
Q Consensus 447 ~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~-------~~~~yHT~~Dt~~~i~~~~ 519 (701)
+.+... ..|. ....+..+|||.||.+..|||++++.... ..++|||++||+++|+
T Consensus 234 ~~~g~~-----~~f~----------~~~~~~~~sDh~pF~~~~GiP~l~~i~~~~~~~~~~f~~~~Ht~~Dt~d~id--- 295 (314)
T 3gux_A 234 HELGYG-----KYFV----------KEDGGETVDDHIYVNKLARIPCVDIINYDAGNPQSSFGSFWHTVNDTMENID--- 295 (314)
T ss_dssp HHHTCT-----TTEE----------EEECCCCCCHHHHHHHHSCCCEEEEEBCC--------------------CBC---
T ss_pred HHcCCc-----cccc----------cccCCCCCCccHHHHhcCCCceEEEecccccccccCCCCCCCCCcCcchhCC---
Confidence 443211 1110 01122257999999984599999996531 2379999999999884
Q ss_pred CCchHHHHHHHHHHHHHHHH
Q 005347 520 DPTFQRHVAAASMWGLVALQ 539 (701)
Q Consensus 520 dp~~~~~~~~a~~~~~l~~~ 539 (701)
+..+..+++++..+++.
T Consensus 296 ---~~~l~~~~~~~~~~~y~ 312 (314)
T 3gux_A 296 ---RNTLKAVGQTVMDVIYN 312 (314)
T ss_dssp ---HHHHHHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHHHHHHHhh
Confidence 45677888888888765
No 13
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.94 E-value=3.1e-26 Score=242.28 Aligned_cols=201 Identities=24% Similarity=0.295 Sum_probs=157.0
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcC----------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCc
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT----------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDA 392 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~----------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~ 392 (701)
...||||+++|...+++.|++++|+|+++ .||.||++|+|++||++|.|.+ .+++|+++|+|++|++
T Consensus 74 ~~~nvi~~~~g~~~~~~~v~l~aH~D~v~~~~~~~~~~~~Ga~D~~~g~a~~l~~~~~l~~---~~~~~~~~i~~~~~~~ 150 (299)
T 1rtq_A 74 NQKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSE---NNFQPKRSIAFMAYAA 150 (299)
T ss_dssp EEEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEESC
T ss_pred CCceEEEEEECCCCCCCEEEEEeccccCCCcCcCCCcccCCCcccHHHHHHHHHHHHHHHH---cCCCCCceEEEEEECC
Confidence 46899999999754468999999999974 5999999999999999999875 4678999999999999
Q ss_pred ccCCCcchHHHHHHHHHhhhccEEEEEEecCccc-C--Ccccc---ccChhHHHHHHHHHHHcCCCCCCcchhhhccccC
Q 005347 393 EEYGLIGSTEWVEENREMLASRAVAYLNIDSAVH-E--AGFHA---SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGS 466 (701)
Q Consensus 393 EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~-g--~~~~~---~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~ 466 (701)
||.|+.||++|++++... .++++++||+||+|. | ..+.+ ..++.+..++.+.++... |.-
T Consensus 151 EE~g~~Gs~~~~~~~~~~-~~~~~~~i~~D~~g~~g~~~~i~~~~~~~~~~l~~~l~~~a~~~~-~~i------------ 216 (299)
T 1rtq_A 151 EEVGLRGSQDLANQYKSE-GKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYL-PSL------------ 216 (299)
T ss_dssp GGGTSHHHHHHHHHHHHT-TCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHC-TTC------------
T ss_pred ccCCchhHHHHHHhhhhc-cccEEEEEEecCCCCCCCCcceEEEeCCCCchHHHHHHHHHHHhC-ccC------------
Confidence 999999999999987764 478999999999875 2 22222 235677777777766531 110
Q ss_pred CCCCccccCCCCCCchHhHHhcCCceEEEeeeC---CCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCC
Q 005347 467 SNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFG---TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (701)
Q Consensus 467 ~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~---~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (701)
.......+..+|||.+|.+ .|||++.+... ...++|||++||++++ |+++..+..+++++..++++||+.
T Consensus 217 --~~~~~~~~~~~sD~~~f~~-~GiP~~~~~~~~~~~~~~~yHt~~Dt~~~~----d~~~~~~~~~~~l~~~~~~~La~~ 289 (299)
T 1rtq_A 217 --TYGFDTCGYACSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANS----DPTGSHAKKFTQLGLAYAIEMGSA 289 (299)
T ss_dssp --CEEEECCSSCCSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGS----CTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred --CcccCCCCCCCCcHHHHHH-CCCCEEEecccccccCCCCCCCcccccccc----CccHHHHHHHHHHHHHHHHHHhCC
Confidence 0011222236899999998 79999877532 1347999999999976 777888899999999999999998
Q ss_pred CCCC
Q 005347 544 EFLP 547 (701)
Q Consensus 544 ~~lP 547 (701)
+++.
T Consensus 290 ~~~~ 293 (299)
T 1rtq_A 290 TGDT 293 (299)
T ss_dssp CC--
T ss_pred CcCC
Confidence 8754
No 14
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=99.89 E-value=4.7e-23 Score=220.10 Aligned_cols=196 Identities=17% Similarity=0.180 Sum_probs=137.4
Q ss_pred EEEEEeeeeeeeeeeeEEEEecCCCCCCcEEEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEee
Q 005347 311 VNLSYTGEYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNW 390 (701)
Q Consensus 311 v~l~~~~~~~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~ 390 (701)
.++.+++........-+-..|+|.. ++.|+|+||+|| +.+|+||+||+|++||+||.|++. +|++|++|+||
T Consensus 154 y~V~IdS~l~~G~l~y~e~~ipG~t--~~~IllsaH~cH-P~~ANDNaSG~a~lleLar~l~~~-----~~~~t~rFvf~ 225 (435)
T 3k9t_A 154 YEVVIDSSLEDGSLTYGEYYIRGEL--EEEILLTTYTCH-PSMCNDNLSGVALITFIAKALSKL-----KTKYSYRFLFA 225 (435)
T ss_dssp EEEEEEEEEESCEEEEEEEEECCSS--SCEEEEEEECCC-CSCTTTTHHHHHHHHHHHHHHTTS-----CCSSEEEEEEE
T ss_pred EEEEEeeeecCCceEEEEEEecCCC--CCEEEEEEEcCC-CCCCCccchHHHHHHHHHHHHhcC-----CCCceEEEEEc
Confidence 5555555544333333333359964 689999999999 448999999999999999998752 68999999999
Q ss_pred CcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCCccccccCh----hHHHHHHHHHHHcCCCCCCcchhhhccccC
Q 005347 391 DAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAGFHASATP----QLDELLKQAAKQVQDPDNSSQTIYDSWTGS 466 (701)
Q Consensus 391 ~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~~~~~~~p----~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~ 466 (701)
+ |++||..|++++...+ +++++.||+||+|.+..+....++ ....++..+.+.. .+. ...
T Consensus 226 p----g~iGS~~yl~~~~~~l-~~i~a~lnLDmVGd~~~~~y~~sr~g~~~~d~~~~~vl~~~-~~~---~~~------- 289 (435)
T 3k9t_A 226 P----ETIGSITWLSRNEDKL-KNIKMGLVATCVGDAGIKNYKRTKFGDAEIDKIVEKVLMHC-GSE---YYV------- 289 (435)
T ss_dssp C----TTHHHHHHHHHCGGGG-GGEEEEEECCSCCSSSCEEEECCTTSSSHHHHHHHHHHHHS-SSC---EEE-------
T ss_pred C----ccHHHHHHHHhChHhh-hceEEEEEEEEecCCCCceeecCCCCChHHHHHHHHHHhhc-CCC---Cce-------
Confidence 8 7999999999987655 599999999999987544333332 2333444444431 111 111
Q ss_pred CCCCccccCCCCCCchHhHHhcCC--ceEEEeeeC-CCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCC
Q 005347 467 SNSPVIGRLGGGGSDYAAFIQHIG--VPVADMSFG-TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (701)
Q Consensus 467 ~~~~~~~~~~~~~SD~~~F~~~~G--IPs~~~~~~-~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (701)
..+...||||.+|.. .| ||++.|... ..||.|||+.||+++|+ | +.+...++++..++-.|-.+
T Consensus 290 ------~~f~~~GSDh~qF~s-pG~dIPv~~~~r~~~~~peYHTs~Dtld~IS----p--e~L~~s~~iv~~~i~~Le~n 356 (435)
T 3k9t_A 290 ------ADFFPWGSDERQFSS-PGINLSVGSLMRSCYGFDGYHTSADNLCYMN----K--DGLADSYKTYLEVIYTIENN 356 (435)
T ss_dssp ------ECCCSCSSTHHHHTS-TTTCCCEEEEESSCTTCTTTTBTTSSGGGCC----H--HHHHHHHHHHHHHHHHHHHC
T ss_pred ------ecCCCCCCcchhHhh-CCCCCCEEEEecCCCCCcccCCCcCChhhCC----H--HHHHHHHHHHHHHHHHhhcc
Confidence 111126799999998 79 999998764 23789999999999874 3 33455666666666555443
No 15
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.32 E-value=4.5e-11 Score=123.93 Aligned_cols=183 Identities=17% Similarity=0.149 Sum_probs=124.6
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcCC-----------------------CCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-----------------------GA~DnasG~A~lLElAr~l~~~~~~g~ 379 (701)
...||++++ |.. .+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.
T Consensus 50 ~~~nv~a~~-g~~--~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~---~~ 123 (269)
T 4h2k_A 50 DTLNLWAKH-GTS--EPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKA---NP 123 (269)
T ss_dssp TBCEEEEEE-CSS--SCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CT
T ss_pred CceEEEEEe-CCC--CCEEEEEeeecccCCCCcccccCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHh---CC
Confidence 357999998 643 568999999998642 8899999999999999988754 34
Q ss_pred CCCCcEEEEeeCcccCCCc-chHHHHHHHHHhhhccEEEEEEecCcccC---Ccc-------ccccC-hhHHHHHHHHHH
Q 005347 380 KPRRTIVLCNWDAEEYGLI-GSTEWVEENREMLASRAVAYLNIDSAVHE---AGF-------HASAT-PQLDELLKQAAK 447 (701)
Q Consensus 380 ~p~rtI~F~~~~~EE~Gl~-GS~~~~~~~~~~l~~~~va~iNlD~~g~g---~~~-------~~~~~-p~l~~~~~~~~~ 447 (701)
+++++|+|+++.+||.|.. ||..+++..... ..+..+.|++|..... ..+ ..... +.+.+.+.++++
T Consensus 124 ~~~~~i~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~Ept~~~~~~~~i~~g~~G~G~~~~~~~l~~~l~~aa~ 202 (269)
T 4h2k_A 124 NHKGTIALLITSDEEATAKDGTIHVVETLMAR-DEKITYCMVGEPSSAKNLGDVVKNGRRGGGFLTKPGKLLDSITSAIE 202 (269)
T ss_dssp TCSSEEEEEEESCSSSCCTTSHHHHHHHHHHT-TCCCCEEEECCCCBSSSTTSEEECSCTTCC------HHHHHHHHHHH
T ss_pred CCCccEEEEEEeccccCcccCHHHHHHHHHhc-CCCCCEEEEECCCCCCcCCceeEEecccccccCCCcHHHHHHHHHHH
Confidence 6789999999999999985 999988775443 3566778888754321 001 11122 245666666665
Q ss_pred H-cCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHH
Q 005347 448 Q-VQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRH 526 (701)
Q Consensus 448 ~-v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~ 526 (701)
. ..-+ +.+...| +++|...|.. .|+|++.|.-.. .++||+.+..+. +-.
T Consensus 203 ~~~gi~-----------------~~~~~~g-ggtDa~~~~~-~g~p~~~~~~~~--~~~Hs~~E~v~~---------~d~ 252 (269)
T 4h2k_A 203 ETIGIT-----------------PKAETGG-GTSDGRFIAL-MGAEVVEFGPLN--STIHKVNECVSV---------EDL 252 (269)
T ss_dssp HHHSCC-----------------CEEECC---CHHHHHHHT-TTCEEEECCSBC--TTTTSTTCEEEH---------HHH
T ss_pred HHhCCC-----------------CEEecCC-CCchHHHHHh-hCCCEEEEEeCC--CCCcCCcccccH---------HHH
Confidence 4 2211 2223345 7899987765 799999876533 567999986543 224
Q ss_pred HHHHHHHHHHHHHhcC
Q 005347 527 VAAASMWGLVALQLAD 542 (701)
Q Consensus 527 ~~~a~~~~~l~~~La~ 542 (701)
.+.++++..++.+|.+
T Consensus 253 ~~~~~ll~~~l~~l~~ 268 (269)
T 4h2k_A 253 GKCGEIYHKMLVNLLD 268 (269)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4677888888887765
No 16
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.27 E-value=8e-11 Score=121.93 Aligned_cols=181 Identities=18% Similarity=0.129 Sum_probs=124.7
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC-----------------------CCCCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-----------------------GA~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+|++ |.. .+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.+
T Consensus 51 ~~nv~a~~-g~~--~~~i~l~~H~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~---~~~ 124 (268)
T 3t68_A 51 TTNFWARR-GTQ--SPLFVFAGHTDVVPAGPLSQWHTPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAE---HPD 124 (268)
T ss_dssp EEC-CEEE-CSS--SCEEEEEEECCBCCCCCGGGCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CTT
T ss_pred ccEEEEEe-CCC--CCeEEEEccccccCCCCcccCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHh---CCC
Confidence 57999998 653 568999999998742 8999999999999999988753 346
Q ss_pred CCCcEEEEeeCcccCCC-cchHHHHHHHHHhhhccEEEEEEecCcccC---Ccc--c------cccChhHHHHHHHHHHH
Q 005347 381 PRRTIVLCNWDAEEYGL-IGSTEWVEENREMLASRAVAYLNIDSAVHE---AGF--H------ASATPQLDELLKQAAKQ 448 (701)
Q Consensus 381 p~rtI~F~~~~~EE~Gl-~GS~~~~~~~~~~l~~~~va~iNlD~~g~g---~~~--~------~~~~p~l~~~~~~~~~~ 448 (701)
++++|+|+++.+||.|. .||..+++..... ..+..+.|++|..... ..+ . +...+.+.+.+.++++.
T Consensus 125 ~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~~~-~~~~d~~i~~ept~~~~~~~~i~~g~~G~p~~~~~~~l~~~l~~a~~~ 203 (268)
T 3t68_A 125 HQGSIGFLITSDEEGPFINGTVRVVETLMAR-NELIDMCIVGEPSSTLAVGDVVKNGRRGGGFLTDTGELLAAVVAAVEE 203 (268)
T ss_dssp CSSEEEEEEESCTTSSSCCHHHHHHHHHHHT-TCCCCEEEECSCCBSSSTTSEEEECCGGGGTSCCCCHHHHHHHHHHHH
T ss_pred CCCcEEEEEEeCCccCcccCHHHHHHHHHhc-CCCCCEEEEeCCCCCccCCceeEEecCCCcccCCchHHHHHHHHHHHH
Confidence 78999999999999998 4999988865433 3566778888865321 111 1 11123356666666654
Q ss_pred c-CCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHH
Q 005347 449 V-QDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHV 527 (701)
Q Consensus 449 v-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~ 527 (701)
. ..+ +.....+ +++|...|.+ .|+|++.|... ..++||+.+..+.- -..
T Consensus 204 ~~gi~-----------------~~~~~sg-ggtD~~~~~~-~g~p~~~~~~~--~~~~Hs~~E~v~~~---------d~~ 253 (268)
T 3t68_A 204 VNHQA-----------------PALLTTG-GTSDGRFIAQ-MGAQVVELGPV--NATIHKVNECVRIA---------DLE 253 (268)
T ss_dssp HHSSC-----------------CEEESSC-CCHHHHHHHH-HTCEEEECCSB--CTTTTSTTCEEEHH---------HHH
T ss_pred HhCCC-----------------cEEecCc-cccHHHHHHh-cCCCEEEEeeC--CCCCCCccccccHH---------HHH
Confidence 2 211 1222334 7899998886 69999887543 34569999876532 234
Q ss_pred HHHHHHHHHHHHhc
Q 005347 528 AAASMWGLVALQLA 541 (701)
Q Consensus 528 ~~a~~~~~l~~~La 541 (701)
+.++++..++.+|.
T Consensus 254 ~~~~vl~~~l~~l~ 267 (268)
T 3t68_A 254 KLTDMYQKTLNHLL 267 (268)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 56777777777664
No 17
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.14 E-value=2.4e-10 Score=123.14 Aligned_cols=148 Identities=22% Similarity=0.234 Sum_probs=100.2
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC--Ccc-
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE--AGF- 430 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g--~~~- 430 (701)
|.||.+|++++|++++.|.+ ++++|+|++++.||.|+.||+.++.. + +..+.|++|+.+.+ +..
T Consensus 180 a~D~k~g~a~~l~a~~~l~~-------~~~~i~~~~~~~EE~g~~G~~~~~~~----~--~~~~~i~~d~~~~~~~p~~~ 246 (353)
T 1y0y_A 180 AFDDRIAVYTILEVAKQLKD-------AKADVYFVATVQEEVGLRGARTSAFG----I--EPDYGFAIDVTIAADIPGTP 246 (353)
T ss_dssp THHHHHHHHHHHHHHHHCCS-------CSSEEEEEEESCCTTTSHHHHHHHHH----H--CCSEEEEEEEEECCCSTTCC
T ss_pred cCccHHHHHHHHHHHHHhhc-------CCCeEEEEEECCcccchhHHHHHhhc----c--CCCEEEEEecccccCCCCCc
Confidence 58889999999999987642 67899999999999999999987532 1 23457888876532 110
Q ss_pred -------------------ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcc-ccCCCCCCchHhHHh-cC
Q 005347 431 -------------------HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HI 489 (701)
Q Consensus 431 -------------------~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~SD~~~F~~-~~ 489 (701)
....++.+.+.+.++++...-| +.. ...+ ++||+.+|.. ..
T Consensus 247 ~~~g~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gi~-----------------~~~~~~~~-ggsDa~~~~~~~~ 308 (353)
T 1y0y_A 247 EHKQVTHLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIP-----------------YQLEILLG-GGTDAGAIHLTKA 308 (353)
T ss_dssp GGGCCCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCC-----------------EEEEECSS-CCCTHHHHTTSTT
T ss_pred cccCccccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCC-----------------EEEeecCC-CCchHHHHHHhCC
Confidence 1123556666777776654221 111 1133 7899999942 36
Q ss_pred CceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCC
Q 005347 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (701)
Q Consensus 490 GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (701)
|||+++++.. ...+||+.+..+. +.....++++..++.+|+..
T Consensus 309 GiPtv~lg~~--~~~~Hs~~E~v~~---------~dl~~~~~ll~~~l~~l~~~ 351 (353)
T 1y0y_A 309 GVPTGALSVP--ARYIHSNTEVVDE---------RDVDATVELMTKALENIHEL 351 (353)
T ss_dssp CCCEEEEEEE--EBSCSSSCEEEEH---------HHHHHHHHHHHHHHHHGGGC
T ss_pred CCcEEEEccc--ccccCCHHHhcCH---------HHHHHHHHHHHHHHHhhhhc
Confidence 9999998753 2358998876543 22456778888888887653
No 18
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.13 E-value=1.8e-10 Score=123.01 Aligned_cols=144 Identities=20% Similarity=0.183 Sum_probs=96.8
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC-----
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA----- 428 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~----- 428 (701)
+.||.+|+|++|++++.|.+ . .++++|+|++++.||.|+.|+..+++. .+....|++|+.....
T Consensus 171 a~D~k~g~a~~l~a~~~l~~---~--~~~~~i~~~~~~~EE~G~~G~~~~~~~------~~~~~~i~~d~~~~~~~p~~~ 239 (332)
T 2wyr_A 171 GLDDRFGVVALIEAIKDLVD---H--ELEGKVIFAFTVQEEVGLKGAKFLANH------YYPQYAFAIDSFACCSPLTGD 239 (332)
T ss_dssp THHHHHHHHHHHHHHHTTTT---S--CCSSEEEEEEESCGGGTSHHHHHHTTT------CCCSEEEEECCEECCSGGGTT
T ss_pred cCCcHHHHHHHHHHHHHHhh---c--CCCceEEEEEECccccCcchHHHHhcc------cCCCEEEEEecccccCCCCCc
Confidence 58899999999999998754 2 366999999999999999999887632 2344678888865421
Q ss_pred -------cc-----ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEe
Q 005347 429 -------GF-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADM 496 (701)
Q Consensus 429 -------~~-----~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~ 496 (701)
.+ ....++.+.+.+.++++....| +.....+ ++||+.+|.. |||++++
T Consensus 240 ~~lg~G~~i~~~d~~~~~~~~l~~~l~~~~~~~gi~-----------------~~~~~~~-ggtDa~~~~~--GiPtv~l 299 (332)
T 2wyr_A 240 VKLGKGPVIRAVDNSAIYSRDLARKVWSIAEKNGIE-----------------IQIGVTG-GGTDASAFQD--RSKTLAL 299 (332)
T ss_dssp CCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHTTCC-----------------CEEEECS-SCCGGGGGTT--TSEEEEE
T ss_pred eeeCCCCEEEEcCCCCCCCHHHHHHHHHHHHHcCCC-----------------eEEecCC-CCchHHHHHc--CCCEEEE
Confidence 01 1223556666677766654221 1122233 7899998865 9999987
Q ss_pred eeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHH
Q 005347 497 SFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (701)
Q Consensus 497 ~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~ 539 (701)
+.. ...+||+.+..+. ......++++..++.+
T Consensus 300 g~~--~~~~Hs~~E~v~~---------~dl~~~~~ll~~~~~~ 331 (332)
T 2wyr_A 300 SVP--IKYLHSEVETLHL---------NDLEKLVKLIEALAFE 331 (332)
T ss_dssp ECE--EBSCSSTTCEEEH---------HHHHHHHHHHHHHHHH
T ss_pred cCC--cCCCCChhhcccH---------HHHHHHHHHHHHHHHh
Confidence 643 3458998876543 2244566676666654
No 19
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.08 E-value=1.2e-10 Score=124.90 Aligned_cols=147 Identities=19% Similarity=0.192 Sum_probs=84.6
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC--Cc--
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE--AG-- 429 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g--~~-- 429 (701)
+.||.+|++++|++++.|. +|+++|+|++++.||.|+.|+..+++. +. ..+.|++|+...+ +.
T Consensus 165 a~D~k~g~a~~l~a~~~l~-------~~~~~i~~~~~~~EE~G~~G~~~~~~~----~~--~~~~i~~d~~~~~~~~G~~ 231 (340)
T 2fvg_A 165 AFDDRAGCSVLIDVLESGV-------SPAYDTYFVFTVQEETGLRGSAVVVEQ----LK--PTCAIVVETTTAGDNPELE 231 (340)
T ss_dssp CHHHHHHHHHHHHHHHTCC-------CCSEEEEEEEECCCC-----CHHHHHH----HC--CSEEEEEEEEEECSCSTTC
T ss_pred cCccHHHHHHHHHHHHHhh-------ccCCcEEEEEEcccccchhhhHHHhhc----cC--CCEEEEEecccCCCCCCCc
Confidence 5788999999999998764 477999999999999999999988763 22 2356778765321 00
Q ss_pred -------------cc-----cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccc-cCCCCCCchHhHHh-cC
Q 005347 430 -------------FH-----ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIG-RLGGGGSDYAAFIQ-HI 489 (701)
Q Consensus 430 -------------~~-----~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~SD~~~F~~-~~ 489 (701)
+. ...++.+.+.+.++++....|. ... ..+ ++||+.+|.. ..
T Consensus 232 ~h~~~~~~G~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~-----------------~~~~~~~-ggtDa~~~~~~~~ 293 (340)
T 2fvg_A 232 ERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPF-----------------QMKRRTA-GGTDAGRYARTAY 293 (340)
T ss_dssp CSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCC-----------------EECCCC--------------C
T ss_pred cccCCcccCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCe-----------------EEEecCC-CCccHHHHHhhCC
Confidence 00 1124566667777666532211 111 233 7899998874 25
Q ss_pred CceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcC
Q 005347 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLAD 542 (701)
Q Consensus 490 GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~ 542 (701)
|||++.++-... .+||+.+..+. ......++++..++.+|+.
T Consensus 294 GiP~v~~g~~~~--~~Hs~~E~v~~---------~dl~~~~~ll~~~~~~l~~ 335 (340)
T 2fvg_A 294 GVPAGVISTPAR--YIHSPNSIIDL---------NDYENTKKLIKVLVEEGKI 335 (340)
T ss_dssp CSCEEEEEEEEE--ESSTTCEEEEH---------HHHHHHHHHHHHHHHHCHH
T ss_pred CCcEEEeccccc--ccCChhhcccH---------HHHHHHHHHHHHHHHhccc
Confidence 999998865432 48999876543 2244667788877777654
No 20
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.07 E-value=9.4e-10 Score=119.38 Aligned_cols=148 Identities=19% Similarity=0.204 Sum_probs=98.0
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC--c--
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA--G-- 429 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~--~-- 429 (701)
+.||.+|+|++|++++.|.+. .++++|.|++++.||.|+.|+..+.+. +. ..+.|++|+...+. .
T Consensus 182 ~~D~k~g~a~~l~a~~~l~~~-----~~~~~v~~~~~~~EE~G~~G~~~~~~~----~~--~d~~i~~d~~~~~~~~g~~ 250 (373)
T 1vhe_A 182 AWDNRIGCAIAIDVLRNLQNT-----DHPNIVYGVGTVQEEVGLRGAKTAAHT----IQ--PDIAFGVDVGIAGDTPGIS 250 (373)
T ss_dssp THHHHHHHHHHHHHHHHHHTS-----CCSSEEEEEEESCCTTTSHHHHHHHHH----HC--CSEEEEEEEEECCCSTTCC
T ss_pred cCccHHHHHHHHHHHHHHhhc-----CCCceEEEEEECCcccChhhHHHHhcc----cC--CCEEEEEeccccCCCCCCc
Confidence 788899999999999987642 367999999999999999999887432 22 33567777754321 0
Q ss_pred -------------c-----ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcc-ccCCCCCCchHhHHh-cC
Q 005347 430 -------------F-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HI 489 (701)
Q Consensus 430 -------------~-----~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~SD~~~F~~-~~ 489 (701)
+ ....++.+.+.+.++++...-+ +.. ...+ ++||+.+|.. ..
T Consensus 251 ~~~~~~~lg~G~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~-----------------~~~~~~~~-ggtDa~~~~~~~~ 312 (373)
T 1vhe_A 251 EKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGIP-----------------YQFDAIAG-GGTDSGAIHLTAN 312 (373)
T ss_dssp TTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHHHHTCC-----------------CEEEEETT-CCCTHHHHTTSTT
T ss_pred ccccccccCCCceEEEeCCCCCCCHHHHHHHHHHHHHcCCC-----------------eEEecCCC-CCccHHHHHHhCC
Confidence 0 1123556666666666654221 111 1123 7899998842 36
Q ss_pred CceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhc
Q 005347 490 GVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA 541 (701)
Q Consensus 490 GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La 541 (701)
|||+++++.. ...+||+.+..+. ......++++..++.+|+
T Consensus 313 GiPtv~lg~~--~~~~Hs~~E~v~~---------~dl~~~~~ll~~~l~~l~ 353 (373)
T 1vhe_A 313 GVPALSITIA--TRYIHTHAAMLHR---------DDYENAVKLITEVIKKLD 353 (373)
T ss_dssp CCCEEEEEEE--EBSTTSSCEEEEH---------HHHHHHHHHHHHHHHHCC
T ss_pred CCcEEEEccc--cccCCChhheecH---------HHHHHHHHHHHHHHHHhc
Confidence 9999998653 2357998766542 224567778887777764
No 21
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.06 E-value=9.1e-10 Score=118.38 Aligned_cols=128 Identities=23% Similarity=0.203 Sum_probs=80.4
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCCc----
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAG---- 429 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~---- 429 (701)
+.||.+|++++|++++.|.+ .+.+|+++|+|+++..||.|+.|++.+ ..+..+.|++|+...+..
T Consensus 184 ~~D~k~g~a~~l~a~~~l~~---~~~~~~~~i~~~~~~~EE~G~~g~~~~--------~~~~~~~i~~D~~~~~~~p~~~ 252 (349)
T 2gre_A 184 HLDDKVSVAILLKLIKRLQD---ENVTLPYTTHFLISNNEEIGYGGNSNI--------PEETVEYLAVDMGALGDGQASD 252 (349)
T ss_dssp CCTTHHHHHHHHHHHHHHHH---HTCCCSEEEEEEEESCC----CCCCCC--------CTTEEEEEEECCCCCSCC--CC
T ss_pred eccchHHHHHHHHHHHHHHh---ccCCCCceEEEEEECcccCCchhhccc--------ccCCCEEEEEecccccCCCCCC
Confidence 58999999999999998764 355788999999999999999999865 245778899999765421
Q ss_pred ---cc-------cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcc-ccCCCCCCchHhHHh-cCCceEEEee
Q 005347 430 ---FH-------ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HIGVPVADMS 497 (701)
Q Consensus 430 ---~~-------~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~SD~~~F~~-~~GIPs~~~~ 497 (701)
.. ...++.+.+.+.++++...-|.. . ...+ +|||+.+|.. ..|||+++++
T Consensus 253 ~~g~~i~~~~~~~~~~~~l~~~l~~~a~~~gi~~q-----------------~~~~~g-gGsDa~~~~~~~~GiPt~~lg 314 (349)
T 2gre_A 253 EYTVSICAKDSSGPYHYALRKHLVELAKTNHIEYK-----------------VDIYPY-YGSDASAAIRAGFDVKHALIG 314 (349)
T ss_dssp TTSEEEEEEETTEECCHHHHHHHHHHHHHHTCCEE-----------------EEECSC-C--------CCSSSCEEEEEE
T ss_pred CCceEEEEccCCCCCCHHHHHHHHHHHHHcCCCcE-----------------EeccCC-CCccHHHHHHhCCCCcEEEec
Confidence 11 11456777778777776432211 1 1123 7899998852 3699999886
Q ss_pred eCCCCCcCCCCcccHH
Q 005347 498 FGTGYPVYHSMYDDFI 513 (701)
Q Consensus 498 ~~~~~~~yHT~~Dt~~ 513 (701)
.. ..++|| .+..+
T Consensus 315 ~~--~~~~Hs-~E~~~ 327 (349)
T 2gre_A 315 AG--IDSSHA-FERTH 327 (349)
T ss_dssp EC--CBSTTS-SEEEE
T ss_pred cC--cccccc-ceecc
Confidence 53 234788 66554
No 22
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.84 E-value=2.1e-08 Score=97.67 Aligned_cols=106 Identities=22% Similarity=0.207 Sum_probs=73.8
Q ss_pred ccccCCCcceEeeEEEec-----CCCh-hchHHHHhc--CCcccceEEEEEeCC-CchhhHHHHHHHcCCeEEEEEeCCC
Q 005347 134 FHGYAKSGTVIGPVVYVN-----YGRV-EDYVTLKEM--VVNVTGTVVLARYGQ-IFRGDIVHNAFEAGAAGALIFTDRK 204 (701)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~-----~G~~-~D~~~L~~~--gv~v~GkIvlv~~g~-~~~~~k~~~A~~~GA~gvi~~~dp~ 204 (701)
|-..+|.++++|.||++. .|+. .|+...... +...+||||||+.|. |.+.+|+.+|+++||+|||||++..
T Consensus 61 FG~~~p~~~v~G~lv~~~~~~~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~ 140 (194)
T 3icu_A 61 YGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPG 140 (194)
T ss_dssp ECTTSCCSCEEEEEECBSSTTCTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTT
T ss_pred cCCCCCCCCcEEEEEecCCCCCcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCC
Confidence 555678899999999984 4653 344210000 012479999999999 9999999999999999999998631
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhhhCCCCCCCccccCHHHHHHHHHHh
Q 005347 205 DYGGGSDDARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSI 284 (701)
Q Consensus 205 ~~~~~~~~~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~~~IP~~~is~~~a~~Ll~~l 284 (701)
+ +.. . + .++.+ ....||++.|+.++++.|++.|
T Consensus 141 ~-g~~----------------~---~----~m~~~-----------------------~~~~IPsv~Is~~~G~~L~~~L 173 (194)
T 3icu_A 141 T-RNE----------------V---I----PMSHP-----------------------GAVDIVAIMIGNLKGTKILQSI 173 (194)
T ss_dssp C-TTC----------------C---C----CCCCT-----------------------TCCSSEEEEECHHHHHHHHHHH
T ss_pred C-CCc----------------e---e----eecCC-----------------------CCCceeEEEECHHHHHHHHHHH
Confidence 1 000 0 0 01111 1236999999999999999998
Q ss_pred CC
Q 005347 285 GG 286 (701)
Q Consensus 285 ~g 286 (701)
+.
T Consensus 174 ~~ 175 (194)
T 3icu_A 174 QR 175 (194)
T ss_dssp HT
T ss_pred HC
Confidence 53
No 23
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=98.68 E-value=5.1e-08 Score=96.09 Aligned_cols=82 Identities=27% Similarity=0.297 Sum_probs=68.7
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+++++|..+..+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+ .+.+
T Consensus 58 ~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~---~~~~ 134 (198)
T 1q7l_A 58 YVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKV---EGHR 134 (198)
T ss_dssp EEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHH---TTCC
T ss_pred CeEEEEEEccCCCCCCeEEEEeeecccCCCcccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHH---cCCC
Confidence 4799999998653347899999999853 1679999999999999998865 4567
Q ss_pred CCCcEEEEeeCcccCC-CcchHHHHHHHH
Q 005347 381 PRRTIVLCNWDAEEYG-LIGSTEWVEENR 408 (701)
Q Consensus 381 p~rtI~F~~~~~EE~G-l~GS~~~~~~~~ 408 (701)
|+++|+|+++.+||.| +.|+..++++..
T Consensus 135 ~~~~v~~~~~~~EE~g~~~Ga~~~~~~~~ 163 (198)
T 1q7l_A 135 FPRTIHMTFVPDEEVGGHQGMELFVQRPE 163 (198)
T ss_dssp CSSCEEEEEESCGGGTSTTTHHHHTTSHH
T ss_pred CCCCEEEEEEcccccCccccHHHHHHhHH
Confidence 8899999999999997 899999887643
No 24
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=98.55 E-value=1.7e-07 Score=102.66 Aligned_cols=80 Identities=31% Similarity=0.414 Sum_probs=69.2
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC-CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccC-----CC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GL 397 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~-----Gl 397 (701)
..||+|+++|..++.+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.+++++|+|+++.+||. |+
T Consensus 57 ~gnv~a~~~g~~~~~~~i~l~aH~D~v~~~g~~d~~~g~a~~l~~~~~l~~~---~~~~~~~i~~~~~~~EE~~~~~~g~ 133 (408)
T 3n5f_A 57 AGNLIGRKEGTNPDATVVLVGSHLDSVYNGGCFDGPLGVLAGVEVVQTMNEH---GVVTHHPIEVVAFTDEEGARFRFGM 133 (408)
T ss_dssp TCCEEEEECCSSTTSCEEEEEEESCCCTTBCSSTTHHHHHHHHHHHHHHHHT---TCCCSSCEEEEEESCSSCTTTTCCC
T ss_pred CCCEEEEecCCCCCCCEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEEcCccccccCCCC
Confidence 35999999997643689999999999987 8999999999999999998764 457899999999999995 78
Q ss_pred cchHHHHHH
Q 005347 398 IGSTEWVEE 406 (701)
Q Consensus 398 ~GS~~~~~~ 406 (701)
.||..++..
T Consensus 134 ~Gs~~~~~~ 142 (408)
T 3n5f_A 134 IGSRAMAGT 142 (408)
T ss_dssp HHHHHHHTC
T ss_pred cCHHHHHcC
Confidence 899988743
No 25
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=98.53 E-value=3.1e-07 Score=98.61 Aligned_cols=148 Identities=20% Similarity=0.170 Sum_probs=98.8
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC-----
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE----- 427 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g----- 427 (701)
.+.||-.|++++||+++.+++ -+|.+++.|++..-||.|+.|++...... ..++ .|.+|+...+
T Consensus 179 ~~lDnr~g~~~~l~~l~~l~~-----~~~~~~v~~~ft~qEEvG~~Ga~~a~~~~----~pd~--~i~~D~~~a~d~p~~ 247 (355)
T 3kl9_A 179 KAWDNRYGVLMVSELAEALSG-----QKLGNELYLGSNVQEEVGLRGAHTSTTKF----DPEV--FLAVDCSPAGDVYGG 247 (355)
T ss_dssp SCHHHHHHHHHHHHHHHHHSS-----CCCSSEEEEEEESCCTTTSHHHHHHHHHH----CCSE--EEEEEEEECCGGGTS
T ss_pred eccccHHHHHHHHHHHHHhhh-----cCCCceEEEEEECccccCcchhHHHHhcc----CCCE--EEEecCccCCCCCCc
Confidence 678999999999999987653 15789999999999999999987644332 2233 5778875332
Q ss_pred -------Ccc-----ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHh-cCCceEE
Q 005347 428 -------AGF-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ-HIGVPVA 494 (701)
Q Consensus 428 -------~~~-----~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~-~~GIPs~ 494 (701)
+.+ ....+|.+.+.+.+++++..-|.. ....+ +|||..++.. ..|||++
T Consensus 248 ~~~lg~G~~i~~~d~~~~~~~~l~~~l~~~a~~~gIp~q-----------------~~~~g-gGtDa~~i~~a~~Gipt~ 309 (355)
T 3kl9_A 248 QGKIGDGTLIRFYDPGHLLLPGMKDFLLTTAEEAGIKYQ-----------------YYCGK-GGTDAGAAHLKNGGVPST 309 (355)
T ss_dssp SCCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCCEE-----------------EEECS-SCCTHHHHTTSTTCCCEE
T ss_pred ccccCCCcEEEEecCCCCCCHHHHHHHHHHHHHcCCCEE-----------------EECCC-cchHHHHHHHhCCCCCEE
Confidence 112 123467888888888887543321 11123 7999988864 3599999
Q ss_pred EeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Q 005347 495 DMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQL 540 (701)
Q Consensus 495 ~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~L 540 (701)
+++... .+.||+......- -....++++..++.+|
T Consensus 310 ~igvp~--~~~Hs~~E~~~~~---------Di~~~~~ll~~~l~~l 344 (355)
T 3kl9_A 310 TIGVCA--RYIHSHQTLYAMD---------DFLEAQAFLQALVKKL 344 (355)
T ss_dssp EEEEEE--BSCSSSCEEEEHH---------HHHHHHHHHHHHHHTC
T ss_pred EEccCc--CCCCCcceEeeHH---------HHHHHHHHHHHHHHHh
Confidence 987532 2479888765432 1334556666666555
No 26
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=98.42 E-value=2.1e-06 Score=91.77 Aligned_cols=147 Identities=18% Similarity=0.183 Sum_probs=94.0
Q ss_pred CCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC--c---
Q 005347 355 VDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA--G--- 429 (701)
Q Consensus 355 ~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~--~--- 429 (701)
.||-.|++++|++++.+.+. .+..++.|+++..||.|+.|+...... +..+ +.|.+|+...+. .
T Consensus 168 ~D~k~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~~----i~~~--~~i~~D~~~~~~~~~~~~ 236 (348)
T 1ylo_A 168 FDDRLSCYLLVTLLRELHDA-----ELPAEVWLVASSSEEVGLRGGQTATRA----VSPD--VAIVLDTACWAKNFDYGA 236 (348)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEESCCTTSSHHHHHHHHH----HCCS--EEEEECCCCCSSTTCCST
T ss_pred cccHHHHHHHHHHHHHhhhc-----CCCceEEEEEEcccccchhHHHHhhcc----cCCC--EEEEEeccccCCCCCCCc
Confidence 67778999999999886532 356899999999999999998764332 1223 447788765431 1
Q ss_pred -----------c-----ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcc-ccCCCCCCchHhHHh-cCCc
Q 005347 430 -----------F-----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVI-GRLGGGGSDYAAFIQ-HIGV 491 (701)
Q Consensus 430 -----------~-----~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~SD~~~F~~-~~GI 491 (701)
+ ....++.+...+.+++++..-|.. . ...+ +|||...|.. ..||
T Consensus 237 ~~~~~~~~G~~i~~~~~~~~~~~~l~~~~~~~a~~~gi~~~-----------------~~~~~~-ggsDa~~~~~~~~gi 298 (348)
T 1ylo_A 237 ANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQ-----------------ADMFSN-GGTDGGAVHLTGTGV 298 (348)
T ss_dssp TCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHHHHTCCCE-----------------EEECSS-CCCHHHHHHTSTTCC
T ss_pred cccccCCCCcEEEEeCCCCCCCHHHHHHHHHHHHHcCCCeE-----------------EeecCC-CcchHHHHHHhcCCC
Confidence 0 122345666777777665432211 1 1124 7899988853 3599
Q ss_pred eEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhc
Q 005347 492 PVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA 541 (701)
Q Consensus 492 Ps~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La 541 (701)
|+++++-.. ...||+....+. +.....++++..++.+|+
T Consensus 299 pt~~lg~~~--~~~Hs~~E~~~~---------~d~~~~~~ll~~~~~~l~ 337 (348)
T 1ylo_A 299 PTLVMGPAT--RHGHCAASIADC---------RDILQMEQLLSALIQRLT 337 (348)
T ss_dssp CEEEEECCC--BSCSSSCEEEEH---------HHHHHHHHHHHHHHHTCC
T ss_pred CEEEECccc--CcCCCcceEeeH---------HHHHHHHHHHHHHHHHhh
Confidence 999886543 348998765432 223456677777776653
No 27
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=98.35 E-value=1.4e-06 Score=93.22 Aligned_cols=150 Identities=17% Similarity=0.121 Sum_probs=91.0
Q ss_pred CCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC--c---
Q 005347 355 VDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA--G--- 429 (701)
Q Consensus 355 ~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~--~--- 429 (701)
.||-.|+++++++++.+.+. ++..++.|+++..||.|+.|+..-.. .+... +.|.+|+...+. .
T Consensus 171 ~D~r~g~aa~l~al~~l~~~-----~~~~~~~~~~t~~EEvG~~Ga~~~~~----~i~~~--~~i~~D~~~~~~~~~~~~ 239 (346)
T 1vho_A 171 LDNRASCGVLVKVLEFLKRY-----DHPWDVYVVFSVQEETGCLGALTGAY----EINPD--AAIVMDVTFASEPPFSDH 239 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTC-----CCSSEEEEEEECTTSSSHHHHHHTTC----CCCCS--EEEEEEEECCCCTTSCCC
T ss_pred CccHHHHHHHHHHHHHhhhc-----CCCceEEEEEECCcccchhhHHHHhc----ccCCC--EEEEeecccccCCCCCcc
Confidence 67778999999999876532 35578999999999999988875221 11223 346677654331 1
Q ss_pred --------c--ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccC-CCCCCchHhHHh-cCCceEEEee
Q 005347 430 --------F--HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRL-GGGGSDYAAFIQ-HIGVPVADMS 497 (701)
Q Consensus 430 --------~--~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~SD~~~F~~-~~GIPs~~~~ 497 (701)
+ ....++.+.+.+.+++++..-|. ..... +.+|||...|.. ..|||+++++
T Consensus 240 ~~~~~g~~i~~~~~~~~~l~~~~~~~a~~~gi~~-----------------~~~~~~g~ggsDa~~~~~~~~gipt~~lg 302 (346)
T 1vho_A 240 IELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSL-----------------QEEAVGGRSGTETDFVQLVRNGVRTSLIS 302 (346)
T ss_dssp CCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCC-----------------EEESSCCC----CTTHHHHHTTCEEEEEE
T ss_pred cccCCCceEEeCCcCCHHHHHHHHHHHHHCCCCE-----------------EEEeCCCCCCchHHHHHHhCCCCcEEEEe
Confidence 1 11255677777888777643221 11111 226789888742 3699999987
Q ss_pred eCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCC
Q 005347 498 FGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE 543 (701)
Q Consensus 498 ~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~ 543 (701)
-.. ...||+....+. +-....++++..++.+++..
T Consensus 303 ~~~--~~~Hs~~E~~~~---------~dl~~~~~ll~~~~~~~~~~ 337 (346)
T 1vho_A 303 IPL--KYMHTPVEMVDP---------RDVEELARLLSLVAVELEVE 337 (346)
T ss_dssp EEC--BSTTSTTEEECH---------HHHHHHHHHHHHHHHHCC--
T ss_pred hhh--cccccHHHhcCH---------HHHHHHHHHHHHHHHHhhhh
Confidence 643 247998765532 22446777888887777653
No 28
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=98.32 E-value=1.6e-06 Score=94.25 Aligned_cols=90 Identities=27% Similarity=0.367 Sum_probs=72.0
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcC-------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcE
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWT-------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTI 385 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~-------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI 385 (701)
.||+++++|.. .+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+ .+.++.++|
T Consensus 71 ~~v~a~~~g~~--~~~i~l~aH~D~vp~~~~~~~~Pf~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~---~~~~~~~~v 145 (393)
T 1cg2_A 71 DNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKE---YGVRDYGTI 145 (393)
T ss_dssp EEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHH---TTCCCSSEE
T ss_pred CeEEEEECCCC--CceEEEEEecCcCCCCCccccCCeeeeCCEEEcCCcccchHHHHHHHHHHHHHHh---cCCCCCCCE
Confidence 59999998754 36899999999974 2778999999999999999875 345677799
Q ss_pred EEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 386 VLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 386 ~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
+|+++.+||.|..|+..++++... ++-+.|.+|.
T Consensus 146 ~~~~~~~EE~g~~G~~~~~~~~~~----~~d~~i~~e~ 179 (393)
T 1cg2_A 146 TVLFNTDEEKGSFGSRDLIQEEAK----LADYVLSFEP 179 (393)
T ss_dssp EEEEESCGGGTTTTTHHHHHHHHH----HCSEEEECCC
T ss_pred EEEEEcccccCCccHHHHHHHHhh----cCCEEEEeCC
Confidence 999999999999999999886532 2334455553
No 29
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=98.26 E-value=2.3e-06 Score=95.50 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=74.4
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCC
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKP 381 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p 381 (701)
.||+|+++|.. +.+.|++.+|+|+++ .|+.|+.+|+|++|++++.|.+ .+.++
T Consensus 83 ~~v~a~~~~~~-~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~---~~~~~ 158 (479)
T 2zog_A 83 PILLGKLGSDP-QKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQK---TGQEI 158 (479)
T ss_dssp CEEEEEECCCT-TSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHH---TTCCC
T ss_pred CEEEEEecCCC-CCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHH---hCCCC
Confidence 79999997642 357899999999753 1779999999999999998875 34578
Q ss_pred CCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 382 RRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 382 ~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
+++|+|+++.+||.|..|+..++++....+..++-+.|.+|.
T Consensus 159 ~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~ 200 (479)
T 2zog_A 159 PVNLRFCLEGMEESGSEGLDELIFAQKDKFFKDVDYVCISDN 200 (479)
T ss_dssp SSEEEEEEESCGGGTCTTHHHHHHHTTTTTTTTCCEEEECCC
T ss_pred CCcEEEEEecccccCCccHHHHHHhhhhhhcccCCEEEEeCC
Confidence 899999999999999999999988753322223445566663
No 30
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.24 E-value=1.5e-06 Score=93.27 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=66.4
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC---------------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF---------------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~---------------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~ 382 (701)
..||+++++|...+.+.|++.+|+|+++. |+.|+.+|++++|++++.|.+ .+ ++
T Consensus 52 ~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~---~~--~~ 126 (356)
T 3ct9_A 52 GNNVWCLSPMFDLKKPTILLNSHIDTVKPVNGWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCR---TS--QN 126 (356)
T ss_dssp TTEEEEECSSCCTTSCEEEEEEECCBCCCC-------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTT---SC--CS
T ss_pred eeeEEEEEecCCCCCCeEEEEccccccCCCCCCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHh---cC--CC
Confidence 68999999984333578999999998531 777999999999999998865 23 78
Q ss_pred CcEEEEeeCcccC-CCcchHHHHHHH
Q 005347 383 RTIVLCNWDAEEY-GLIGSTEWVEEN 407 (701)
Q Consensus 383 rtI~F~~~~~EE~-Gl~GS~~~~~~~ 407 (701)
++|+|+++.+||. |+.|+..++++.
T Consensus 127 ~~v~~~~~~~EE~~g~~G~~~~~~~~ 152 (356)
T 3ct9_A 127 YNLIYLASCEEEVSGKEGIESVLPGL 152 (356)
T ss_dssp SEEEEEEECCGGGTCTTTHHHHGGGS
T ss_pred CCEEEEEEeCcccCCccCHHHHHhhC
Confidence 9999999999999 899999988764
No 31
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=98.23 E-value=3.3e-06 Score=94.46 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=75.1
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+|+++|...+.+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+. +.+
T Consensus 92 ~~~v~a~~~g~~~~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~---~~~ 168 (481)
T 2pok_A 92 APFVMAHFKSSRPDAKTLIFYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQH---HDD 168 (481)
T ss_dssp SCEEEEEECCSSTTCCEEEEEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT---CSS
T ss_pred CcEEEEEecCCCCCCCeEEEEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHh---cCC
Confidence 5899999997633467899999999853 17789999999999999998764 226
Q ss_pred CCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 381 PRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 381 p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
++++|+|+++.+||.|..|+..+++++...+. .+.+.|+.|.
T Consensus 169 ~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~-~~d~~i~~~~ 210 (481)
T 2pok_A 169 LPVNISFIMEGAEESASTDLDKYLEKHADKLR-GADLLVWEQG 210 (481)
T ss_dssp CSSEEEEEEESCGGGTTTTHHHHHHHHHHHHT-TCSEEECSCC
T ss_pred CCCCEEEEEecccccCchhHHHHHHHhHhhcc-CCCEEEECCC
Confidence 78999999999999999999999887643232 1334555654
No 32
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=98.22 E-value=3.6e-06 Score=94.26 Aligned_cols=96 Identities=18% Similarity=0.128 Sum_probs=75.7
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+|++.|. .+.+.|++.+|+|+++ .|+.|+.+|++++|++++.|.+. +.+
T Consensus 89 ~~~v~a~~~~~-~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~---~~~ 164 (485)
T 3dlj_A 89 PPVILAELGSD-PTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRAL---EQD 164 (485)
T ss_dssp CCEEEEEECCC-TTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHT---TCC
T ss_pred CcEEEEEECCC-CCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHh---CCC
Confidence 35899999654 3367999999999853 27899999999999999988753 457
Q ss_pred CCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 381 PRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 381 p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
++++|+|++..+||.|..|+..++++....+.+++.+.|.+|.
T Consensus 165 ~~~~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~ 207 (485)
T 3dlj_A 165 LPVNIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDN 207 (485)
T ss_dssp CSSEEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCC
T ss_pred CCccEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCC
Confidence 8899999999999999999999998764322234556666663
No 33
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=98.17 E-value=1.6e-06 Score=95.16 Aligned_cols=78 Identities=28% Similarity=0.314 Sum_probs=66.5
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcCC-CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccC-----CCc
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GLI 398 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~-----Gl~ 398 (701)
.||+|+++|..+..+.|++.+|+|+++. |..|+..|++++|++++.|.+. +.+++++|+|+++.+||. |+.
T Consensus 62 gnv~a~~~g~~~~~~~i~l~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~---~~~~~~~v~~i~~~~EE~~~~~~g~~ 138 (423)
T 1z2l_A 62 GNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQ---YGAPLRTVEVVAMAEEEGSRFPYVFW 138 (423)
T ss_dssp SCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHHH---HCSCSEEEEEEEESCSSCCSSSCSCH
T ss_pred CcEEEEEcCCCCCCCEEEEEEecCCCCCCCccCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEEcCccccccCCCcc
Confidence 4999999986422378999999999988 8899999999999999998764 347889999999999997 567
Q ss_pred chHHHHH
Q 005347 399 GSTEWVE 405 (701)
Q Consensus 399 GS~~~~~ 405 (701)
||..+.+
T Consensus 139 Gs~~~~~ 145 (423)
T 1z2l_A 139 GSKNIFG 145 (423)
T ss_dssp HHHHHTT
T ss_pred cHHHHHc
Confidence 9988664
No 34
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=98.15 E-value=2e-05 Score=84.50 Aligned_cols=152 Identities=18% Similarity=0.143 Sum_probs=99.8
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC-C---
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE-A--- 428 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~--- 428 (701)
.+-||-.|++++||+++.++ .+..++.|++.+-||.|+.|++.-.... ..+ ..|.+|+.-.+ +
T Consensus 182 ~~lDnr~g~~~~l~~l~~l~-------~~~~~v~~~ft~qEEVG~~ga~~aa~~i----~pd--~~i~~Dv~~a~dp~~~ 248 (354)
T 2vpu_A 182 PYLDDRICLYAMIEAARQLG-------DHEADIYIVGSVQEEVGLRGARVASYAI----NPE--VGIAMDVTFAKQPHDK 248 (354)
T ss_dssp TTHHHHHHHHHHHHHHHHCC-------CCSSEEEEEECSCCTTTSHHHHHHHHHH----CCS--EEEEEEEEECCCTTST
T ss_pred ecCccHHHHHHHHHHHHHhh-------cCCCeEEEEEECCcccCccchhhhhccc----CCC--EEEEecccccCCCCcc
Confidence 78899999999999988643 2679999999999999999987533222 223 35666764221 1
Q ss_pred -----cc--------ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcccc-CCCCCCchHhHHh-cCCceE
Q 005347 429 -----GF--------HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGR-LGGGGSDYAAFIQ-HIGVPV 493 (701)
Q Consensus 429 -----~~--------~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~SD~~~F~~-~~GIPs 493 (701)
.+ ....+|.+...+.+++++..-|.. ... .+++|||-.++.. ..|||+
T Consensus 249 ~~~~~~lg~Gpv~d~~~~~~~~l~~~l~~~a~~~gIp~q-----------------~~~~~g~gGtDa~~i~~a~~Gipt 311 (354)
T 2vpu_A 249 GKIVPELGKGPVMDVGPNINPKLRAFADEVAKKYEIPLQ-----------------VEPSPRPTGTDANVMQINKEGVAT 311 (354)
T ss_dssp TCCCCCTTSCCEEEESTTSCHHHHHHHHHHHHHTTCCCE-----------------EEECCSCCSSTHHHHHTSTTCCEE
T ss_pred cccCceECCcceEcCCCCCCHHHHHHHHHHHHHcCCCcE-----------------EEeCCCCCccHHHHHHHhcCCCCE
Confidence 11 123457788888888886543321 111 1215899988753 359999
Q ss_pred EEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCC
Q 005347 494 ADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEF 545 (701)
Q Consensus 494 ~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~ 545 (701)
++++.... +.||+......- -....++++..++.+|+..-+
T Consensus 312 ~~Igvp~~--~~Hs~~E~~~~~---------D~~~~~~ll~~~l~~l~~~~~ 352 (354)
T 2vpu_A 312 AVLSIPIR--YMHSQVELADAR---------DVDNTIKLAKALLEELKPMDF 352 (354)
T ss_dssp EEEEEEEB--STTSTTCEEEHH---------HHHHHHHHHHHHHHHCCCCCC
T ss_pred EEECcccc--cCcCcceEeeHH---------HHHHHHHHHHHHHHhccHhhc
Confidence 99875322 478887765432 234567788888888876543
No 35
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=98.11 E-value=4.9e-06 Score=92.90 Aligned_cols=78 Identities=26% Similarity=0.404 Sum_probs=66.9
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC-CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccC-----CC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----GL 397 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~-----Gl 397 (701)
..||+|+++|... .+.|++.+|+|+++. |..|+..|++++|++++.|.+. +.+++++|+|+++.+||. |+
T Consensus 92 ~gnvia~~~g~~~-~~~i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~---~~~~~~~v~lif~~dEE~~~~~~g~ 167 (474)
T 2v8h_A 92 IGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDN---NYVPNYDVCVVVWFNAEGARFARSC 167 (474)
T ss_dssp TCCEEEEECCSSC-CSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHH---TCCCSSCEEEEECTTCSCSSSSCTT
T ss_pred CceEEEEECCCCC-CCeEEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHc---CCCCCCCEEEEEECCccCCCCCCCc
Confidence 4599999998643 458999999999987 7789999999999999988753 557889999999999998 78
Q ss_pred cchHHHHH
Q 005347 398 IGSTEWVE 405 (701)
Q Consensus 398 ~GS~~~~~ 405 (701)
.||..+++
T Consensus 168 ~Gs~~l~~ 175 (474)
T 2v8h_A 168 TGSSVWSH 175 (474)
T ss_dssp HHHHHHTT
T ss_pred ccHHHHHh
Confidence 89998764
No 36
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=98.11 E-value=4.2e-06 Score=92.14 Aligned_cols=91 Identities=22% Similarity=0.222 Sum_probs=72.4
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcCC-----------------------CCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-----------------------GA~DnasG~A~lLElAr~l~~~~~~g~ 379 (701)
...||+|+++|.. +.+.|++.+|+|+++. |+.|+.+|+|++|++++.|.+. +.
T Consensus 89 ~~~~via~~~g~~-~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~---~~ 164 (433)
T 3pfo_A 89 GSMQVVATADSDG-KGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTA---GY 164 (433)
T ss_dssp GCEEEEEEECCCC-CSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHT---TE
T ss_pred CCcEEEEEEecCC-CCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHc---CC
Confidence 4589999999743 4678999999998742 7899999999999999998754 34
Q ss_pred CCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEec
Q 005347 380 KPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNID 422 (701)
Q Consensus 380 ~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD 422 (701)
+++++|.|++..+||.|..|+..++++. .++-+.|+.|
T Consensus 165 ~~~~~v~~~~~~~EE~g~~G~~~~~~~~-----~~~d~~i~~e 202 (433)
T 3pfo_A 165 APDARVHVQTVTEEESTGNGALSTLMRG-----YRADACLIPE 202 (433)
T ss_dssp EESSCEEEEEESCTTTTCHHHHHHHHTT-----CCCSEEEECC
T ss_pred CCCccEEEEEEecCccCChhHHHHHhcC-----CCCCEEEEeC
Confidence 6789999999999999888999887642 1334455555
No 37
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=98.07 E-value=8.4e-06 Score=86.32 Aligned_cols=144 Identities=13% Similarity=-0.018 Sum_probs=88.0
Q ss_pred CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC-----
Q 005347 354 AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA----- 428 (701)
Q Consensus 354 A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~----- 428 (701)
+.||-+|++++|++++.+ ++ |.|++++.||.|+.|+.....-..... +..+.|++|+...+.
T Consensus 163 ~~D~k~G~aa~l~al~~l--------~~---i~~~~t~~EEvG~~Ga~~a~~~~~~~~--~~~~~i~~D~~~~~~~~~~~ 229 (321)
T 3cpx_A 163 YLDDRLGVWTALELAKTL--------EH---GIIAFTCWEEHGGGSVAYLARWIYETF--HVKQSLICDITWVTEGVEAG 229 (321)
T ss_dssp THHHHHHHHHHHHHTTTC--------CS---EEEEEESSTTTTCCSHHHHHHHHHHHH--CCCEEEECCCEECCSSSCTT
T ss_pred CCcCHHHHHHHHHHHHHh--------cC---cEEEEECCccCchhcchhhhhcccccc--CCCEEEEEeCccccCCcccC
Confidence 478889999999998753 22 899999999999999985321111112 234578888864321
Q ss_pred ---cc----ccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccc-cCCCCCCchHhHHh-cCCceEEEeeeC
Q 005347 429 ---GF----HASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIG-RLGGGGSDYAAFIQ-HIGVPVADMSFG 499 (701)
Q Consensus 429 ---~~----~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~SD~~~F~~-~~GIPs~~~~~~ 499 (701)
.+ ....++.+...+.+++++..-| ++.. ..+ +|||-.++.. ..|||++.++-.
T Consensus 230 ~G~~i~~~~~~~~~~~l~~~~~~~a~~~gi~-----------------~q~~~~~~-GGsD~~~~~~s~~Gipt~~lG~~ 291 (321)
T 3cpx_A 230 KGVAISMRDRMIPRKKYVNRIIELARQTDIP-----------------FQLEVEGA-GASDGRELQLSPYPWDWCFIGAP 291 (321)
T ss_dssp SCEEEEEESSSCCCHHHHHHHHHHHTTSSCC-----------------EEEEECSS-CCCHHHHHHHSSSCCBCCBEECE
T ss_pred CCcEEEECCCCCCCHHHHHHHHHHHHHcCCC-----------------EEEEeCCC-CCccHHHHHHhCCCCCEEEEchh
Confidence 11 1224556666677766643222 1111 134 7899887742 469999987653
Q ss_pred CCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHH
Q 005347 500 TGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQ 539 (701)
Q Consensus 500 ~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~ 539 (701)
. ...||+......= -....++++..++.+
T Consensus 292 ~--~~~Hs~~E~~~~~---------dl~~~~~ll~~~~~~ 320 (321)
T 3cpx_A 292 E--KDAHTPNECVHKK---------DIESMVGLYKYLMEK 320 (321)
T ss_dssp E--BSTTSTTCEEEHH---------HHHHHHHHHHHHHHH
T ss_pred h--cccchhhhheeHH---------HHHHHHHHHHHHHHh
Confidence 2 3579988765421 133455566555543
No 38
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=98.03 E-value=4e-06 Score=90.43 Aligned_cols=78 Identities=26% Similarity=0.357 Sum_probs=64.9
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC----------------CC----CCCchHHHHHHHHHHHHHHhHHcCCCCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF----------------GA----VDPNSGTAALLEVAQRLNKLQKRGWKPRR 383 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~----------------GA----~DnasG~A~lLElAr~l~~~~~~g~~p~r 383 (701)
..||+|+++|...+.+.|++.+|+|+++. |+ .|+.+|++++|++++.|.+. +. +++
T Consensus 56 ~~nv~a~~~g~~~~~~~v~l~aH~D~vp~~~~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~---~~-~~~ 131 (373)
T 3gb0_A 56 AGNLICTLPATKDGVDTIYFTSHMDTVVPGNGIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEK---NI-PHG 131 (373)
T ss_dssp SCCEEEEECCSSTTCCCEEEEEECCBCSSCSSCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHT---TC-CCC
T ss_pred ceeEEEEecCCCCCCCEEEEEEECcccCCCCCcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhc---CC-CCC
Confidence 47999999987434678999999999852 54 48889999999999998753 33 678
Q ss_pred cEEEEeeCcccCCCcchHHHHH
Q 005347 384 TIVLCNWDAEEYGLIGSTEWVE 405 (701)
Q Consensus 384 tI~F~~~~~EE~Gl~GS~~~~~ 405 (701)
+|+|+++.+||.|..|+..+..
T Consensus 132 ~v~~~~~~~EE~g~~Ga~~~~~ 153 (373)
T 3gb0_A 132 TIEFIITVGEESGLVGAKALDR 153 (373)
T ss_dssp CEEEEEESCGGGTSHHHHHSCG
T ss_pred CEEEEEEeccccCchhhhhhCH
Confidence 9999999999999999988743
No 39
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=97.97 E-value=9e-06 Score=87.52 Aligned_cols=90 Identities=20% Similarity=0.100 Sum_probs=69.4
Q ss_pred eeEEEEecCC-CCCCcEEEEEeccCCcCC-----------------CCCCCchHHHHHHHHHHHHHHhHHcCCCC---CC
Q 005347 325 QNVIGIIPGT-EEPDRLVILGNHRDAWTF-----------------GAVDPNSGTAALLEVAQRLNKLQKRGWKP---RR 383 (701)
Q Consensus 325 ~NVia~i~G~-~~~~~~Ivl~aH~Ds~~~-----------------GA~DnasG~A~lLElAr~l~~~~~~g~~p---~r 383 (701)
.|+++.++|. ..+.+.|++.+|+|+++. |+.|+.+|++++|++++.|.+.. .++ ++
T Consensus 51 ~~~~~~~~~~~~~~~~~i~l~aH~D~vp~~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~---~~~~~~~g 127 (364)
T 2rb7_A 51 HDGIPSVMVLPEKGRAGLLLMAHIDVVDAEDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNAL---KAAGRSQK 127 (364)
T ss_dssp ETTEEEEEECSBTTEEEEEEEEECCCCCCCGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHH---HHTTCCGG
T ss_pred CCCceEEEEEcCCCCCeEEEECccCcCCCCCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhC---CCCcccCC
Confidence 6888988763 223578999999998741 68899999999999999998653 244 34
Q ss_pred c--EEEEeeCcccC-CCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 384 T--IVLCNWDAEEY-GLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 384 t--I~F~~~~~EE~-Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
+ |+|+++.+||. |+.|+..++++. ++.+.|++|.
T Consensus 128 ~~~v~~~~~~~EE~~g~~G~~~~~~~~------~~d~~i~~d~ 164 (364)
T 2rb7_A 128 DMALGLLITGDEEIGGMNGAAKALPLI------RADYVVALDG 164 (364)
T ss_dssp GCCEEEEEESCGGGTSTTTHHHHGGGC------EEEEEEECSS
T ss_pred CccEEEEEEeccccCchhhHHHHHhcC------CCCEEEEccC
Confidence 7 99999999996 688999887754 3445666663
No 40
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=97.94 E-value=7e-06 Score=90.57 Aligned_cols=91 Identities=19% Similarity=0.176 Sum_probs=69.3
Q ss_pred eeeEEEEecCCCC-CCcEEEEEeccCCcCC---------------C----------------------------------
Q 005347 324 IQNVIGIIPGTEE-PDRLVILGNHRDAWTF---------------G---------------------------------- 353 (701)
Q Consensus 324 ~~NVia~i~G~~~-~~~~Ivl~aH~Ds~~~---------------G---------------------------------- 353 (701)
..||+|+++|... ..+.|++.+|+|+++. |
T Consensus 80 ~~nv~a~~~g~~~~~~~~v~l~~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG 159 (434)
T 3ife_A 80 NGYVMATLPANTDKDVPVIGFLAHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDG 159 (434)
T ss_dssp TSCEEEEECCBSSSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCS
T ss_pred CcEEEEEeCCCCCCCCCeEEEEEEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCC
Confidence 5799999998752 3578999999999852 1
Q ss_pred ----CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 354 ----AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 354 ----A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
+.|+.+|+|++|++++.|.+ .+..|+++|+|+++.+||.| .|+..+..+ .+ ++-+.+.+|.
T Consensus 160 ~t~~~~D~K~gva~~l~a~~~L~~---~~~~~~~~i~~if~~~EE~g-~Ga~~~~~~---~~--~~d~~~~~d~ 224 (434)
T 3ife_A 160 TTLLGADDKAGLTEIMVAMNYLIH---NPQIKHGKIRVAFTPDEEIG-RGPAHFDVE---AF--GASFAYMMDG 224 (434)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHT---CTTSCBCCEEEEEESCGGGT-CTGGGCCHH---HH--CCSEEEECCC
T ss_pred ccchhhhhHHHHHHHHHHHHHHHh---CCCCCCCCEEEEEECCcccC-hHHHHhhhh---hc--CCCEEEEecC
Confidence 36778999999999998864 34578899999999999999 898775432 22 2444566663
No 41
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=97.94 E-value=2e-05 Score=84.81 Aligned_cols=90 Identities=26% Similarity=0.240 Sum_probs=70.9
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcC----------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEE
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWT----------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLC 388 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~----------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~ 388 (701)
.||+++++|.. .+.|++.+|+|+++ .|+.|+-+|+|++|++++.|.+ . .+++++|+|+
T Consensus 58 ~~~~a~~~~~~--~~~v~l~~H~D~vp~~~~~~~~~~~g~~~g~G~~D~K~~~a~~l~a~~~l~~---~-~~~~~~v~~~ 131 (369)
T 3tx8_A 58 NNVLARTNRGL--ASRVMLAGHIDTVPIADNLPSRVEDGIMYGCGTVDMKSGLAVYLHTFATLAT---S-TELKHDLTLI 131 (369)
T ss_dssp TEEEEECCCCC--SCEEEEEEECCBSCCCSCCSCEECSSEEESSSTTTTHHHHHHHHHHHHHHTS---C-TTCCSEEEEE
T ss_pred CcEEEEecCCC--CCeEEEEcccCccCCCCCCCCeEECCEEEcCCcccchHHHHHHHHHHHHHHh---h-cCCCccEEEE
Confidence 58999998763 67899999999875 3888999999999999998864 1 2578999999
Q ss_pred eeCcccCCC--cchHHHHHHHHHhhhccEEEEEEec
Q 005347 389 NWDAEEYGL--IGSTEWVEENREMLASRAVAYLNID 422 (701)
Q Consensus 389 ~~~~EE~Gl--~GS~~~~~~~~~~l~~~~va~iNlD 422 (701)
+..+||.|. .|+..+++++...+ +....|+.|
T Consensus 132 ~~~~EE~g~~~~G~~~~~~~~~~~~--~~~~~i~~e 165 (369)
T 3tx8_A 132 AYECEEVADHLNGLGHIRDEHPEWL--AADLALLGE 165 (369)
T ss_dssp EECCCSSCTTSCHHHHHHHHCGGGG--CCSEEEECC
T ss_pred EEeccccCcccccHHHHHHhccccc--CCCEEEEeC
Confidence 999999987 79998888763222 233445544
No 42
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=97.88 E-value=3.7e-05 Score=85.68 Aligned_cols=92 Identities=24% Similarity=0.291 Sum_probs=73.0
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCC------cC-----------------CCCCCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDA------WT-----------------FGAVDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds------~~-----------------~GA~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+|+++|. +.+.|++.+|+|. |. .|+.|+-+|++++|.+++.|.+. +.+
T Consensus 77 ~~~v~a~~~g~--~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~---~~~ 151 (472)
T 3pfe_A 77 TPLLFMEIPGQ--IDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQ---GLP 151 (472)
T ss_dssp CCEEEEEECCS--EEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHT---TCC
T ss_pred CcEEEEEEcCC--CCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHc---CCC
Confidence 46999999983 3678999999994 21 18889999999999999998653 445
Q ss_pred CCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEec
Q 005347 381 PRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNID 422 (701)
Q Consensus 381 p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD 422 (701)
+. +|+|++..+||.|..|+..++++....+ +++-+.+.+|
T Consensus 152 ~~-~v~~~~~~~EE~g~~g~~~~~~~~~~~~-~~~d~~~~~~ 191 (472)
T 3pfe_A 152 YP-RCILIIEACEESGSYDLPFYIELLKERI-GKPSLVICLD 191 (472)
T ss_dssp CE-EEEEEEESCGGGTSTTHHHHHHHHHHHH-CCCSEEEEEC
T ss_pred CC-cEEEEEEeCCCCCChhHHHHHHHhHhhc-cCCCEEEEeC
Confidence 55 9999999999999999999998875443 3455556666
No 43
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=97.86 E-value=1e-05 Score=88.14 Aligned_cols=78 Identities=31% Similarity=0.357 Sum_probs=63.4
Q ss_pred eeeEEEEecCC--CCCCcEEEEEeccCCcCC-----------------CC----CCCchHHHHHHHHHHHHHHhHHcCCC
Q 005347 324 IQNVIGIIPGT--EEPDRLVILGNHRDAWTF-----------------GA----VDPNSGTAALLEVAQRLNKLQKRGWK 380 (701)
Q Consensus 324 ~~NVia~i~G~--~~~~~~Ivl~aH~Ds~~~-----------------GA----~DnasG~A~lLElAr~l~~~~~~g~~ 380 (701)
..||+|+++|. ..+.+.|++.+|+|+++. |+ .|+.+|++++|++++.|.+. + .
T Consensus 74 ~~nvia~~~g~~~~~~~~~i~l~aH~D~vp~g~~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~---~-~ 149 (396)
T 3rza_A 74 ANNLVCTMNSTIEEGEVPKLYLTSHMDTVVPAINVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQ---Q-I 149 (396)
T ss_dssp SCCEEEEECCCCC---CCCEEEEEECCBCSSCSSCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHH---T-C
T ss_pred CceEEEEECCcCCCCCCCeEEEEEECCccCCCCCcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhc---C-C
Confidence 57999999986 234678999999999842 54 38889999999999998764 3 3
Q ss_pred CCCcEEEEeeCcccCCCcchHHHHH
Q 005347 381 PRRTIVLCNWDAEEYGLIGSTEWVE 405 (701)
Q Consensus 381 p~rtI~F~~~~~EE~Gl~GS~~~~~ 405 (701)
++.+|+|+++.+||.|..|+..+.+
T Consensus 150 ~~~~v~~~~~~~EE~g~~Ga~~~~~ 174 (396)
T 3rza_A 150 PHGQIQFVITVGEESGLIGAKELNS 174 (396)
T ss_dssp CCCCEEEEEESCGGGTSHHHHHCCG
T ss_pred CCCCEEEEEEcccccccHhHhhhch
Confidence 6789999999999999999988654
No 44
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=97.82 E-value=0.00011 Score=79.75 Aligned_cols=80 Identities=24% Similarity=0.236 Sum_probs=64.9
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcCC-----------------------CCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-----------------------GA~DnasG~A~lLElAr~l~~~~~~g~ 379 (701)
...||++++ |.. .+.|++.+|+|+++. |+.|+.+|++++|++++.|.+. +.
T Consensus 50 ~~~nv~a~~-g~~--~~~i~l~~H~D~Vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~---~~ 123 (393)
T 1vgy_A 50 NTKNIWLRR-GTK--APVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAK---HP 123 (393)
T ss_dssp TBCEEEEEE-CSS--SSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CT
T ss_pred CCcEEEEEE-CCC--CCEEEEEcccCCcCCCCcccCCCCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHh---cC
Confidence 357999999 752 578999999998642 6679999999999999987653 44
Q ss_pred CCCCcEEEEeeCcccCC-CcchHHHHHHHH
Q 005347 380 KPRRTIVLCNWDAEEYG-LIGSTEWVEENR 408 (701)
Q Consensus 380 ~p~rtI~F~~~~~EE~G-l~GS~~~~~~~~ 408 (701)
+++++|+|+++.+||.| +.|+..+++...
T Consensus 124 ~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~ 153 (393)
T 1vgy_A 124 NHQGSIALLITSDEEGDALDGTTKVVDVLK 153 (393)
T ss_dssp TCSSEEEEEEESCSSSCCTTSHHHHHHHHH
T ss_pred CCCCcEEEEEEeccccCCcCCHHHHHHHHH
Confidence 68899999999999974 789998776543
No 45
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=97.75 E-value=9e-05 Score=81.20 Aligned_cols=78 Identities=33% Similarity=0.345 Sum_probs=62.5
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCCCCC---------CC----c---hHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTFGAV---------DP----N---SGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~---------Dn----a---sG~A~lLElAr~l~~~~~~g~~p~rtI~F 387 (701)
..||+|+++|.. + +.|++.+|+|+++.|-. |+ . .|++++|++++.|.+. +.+++++|+|
T Consensus 71 ~~~l~a~~~~~~-~-~~i~l~aH~D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~---~~~~~~~v~~ 145 (418)
T 1xmb_A 71 ITGVIGYIGTGE-P-PFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEH---RHHLQGTVVL 145 (418)
T ss_dssp TTEEEEEEESSS-S-CEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHT---GGGCSSEEEE
T ss_pred CcEEEEEEcCCC-C-CEEEEEecccccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhc---cccCCceEEE
Confidence 479999998764 3 78999999999864210 11 1 7999999999998764 3367899999
Q ss_pred EeeCcccCCCcchHHHHHHH
Q 005347 388 CNWDAEEYGLIGSTEWVEEN 407 (701)
Q Consensus 388 ~~~~~EE~Gl~GS~~~~~~~ 407 (701)
++..+|| |..|+..++++.
T Consensus 146 ~~~~~EE-g~~G~~~~~~~g 164 (418)
T 1xmb_A 146 IFQPAEE-GLSGAKKMREEG 164 (418)
T ss_dssp EEECCTT-TTCHHHHHHHTT
T ss_pred EEecccc-ccccHHHHHHcC
Confidence 9999999 999999988764
No 46
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=97.74 E-value=4.8e-05 Score=85.30 Aligned_cols=79 Identities=16% Similarity=0.158 Sum_probs=65.4
Q ss_pred eeEEEEec-CCCCCCcEEEEEeccCCcC---------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCC
Q 005347 325 QNVIGIIP-GTEEPDRLVILGNHRDAWT---------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (701)
Q Consensus 325 ~NVia~i~-G~~~~~~~Ivl~aH~Ds~~---------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~ 382 (701)
.|+++.++ |. ..+.|++.+|+|+++ .|+.|+.+|++++|.+++.|.+ .+.+++
T Consensus 87 ~~~~~~~~~g~--~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~---~~~~~~ 161 (492)
T 3khx_A 87 DHIAGRIEAGK--GNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILED---MNVDWK 161 (492)
T ss_dssp TTTEEEEEEEC--SSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHH---TTCCCS
T ss_pred CCEEEEEEeCC--CCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHH---cCCCCC
Confidence 36777765 43 257899999999753 1889999999999999998865 455788
Q ss_pred CcEEEEeeCcccCCCcchHHHHHHHH
Q 005347 383 RTIVLCNWDAEEYGLIGSTEWVEENR 408 (701)
Q Consensus 383 rtI~F~~~~~EE~Gl~GS~~~~~~~~ 408 (701)
++|+|++..+||.|..|+.+|++++.
T Consensus 162 ~~i~~~~~~~EE~g~~g~~~~~~~~~ 187 (492)
T 3khx_A 162 KRIHMIIGTDEESDWKCTDRYFKTEE 187 (492)
T ss_dssp SEEEEEEECCTTCCCCTTSHHHHHSC
T ss_pred CCEEEEEECCccCCCcCHHHHHHhCc
Confidence 99999999999999999999998763
No 47
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=97.69 E-value=9.4e-05 Score=82.19 Aligned_cols=77 Identities=18% Similarity=0.198 Sum_probs=63.2
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcCC----------------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCC
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWTF----------------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~~----------------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~ 382 (701)
.++++.+ |.. .+.|++.+|+|.++. |+.|+..|++++|++++.|.+. +.+++
T Consensus 69 ~~~~~~~-g~~--~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~---~~~~~ 142 (470)
T 1lfw_A 69 YAGRVNF-GAG--DKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA---GFKPK 142 (470)
T ss_dssp TEEEEEE-CCC--SSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH---TCCCS
T ss_pred eEEEEEe-CCC--CCeEEEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc---CCCCC
Confidence 4567777 643 578999999997421 6788889999999999988753 55788
Q ss_pred CcEEEEeeCcccCCCcchHHHHHHH
Q 005347 383 RTIVLCNWDAEEYGLIGSTEWVEEN 407 (701)
Q Consensus 383 rtI~F~~~~~EE~Gl~GS~~~~~~~ 407 (701)
++|+|+++.+||.|..|+..++++.
T Consensus 143 ~~i~~i~~~~EE~g~~G~~~~~~~~ 167 (470)
T 1lfw_A 143 KKIDFVLGTNEETNWVGIDYYLKHE 167 (470)
T ss_dssp SEEEEEEESCTTTTCHHHHHHHHHS
T ss_pred CCEEEEEecCcccCCccHHHHHHhC
Confidence 9999999999999999999988764
No 48
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=97.68 E-value=3.3e-05 Score=84.58 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=66.8
Q ss_pred eeeEEEEecCCCC-CCcEEEEEeccCCcCCC-------------------------------------------------
Q 005347 324 IQNVIGIIPGTEE-PDRLVILGNHRDAWTFG------------------------------------------------- 353 (701)
Q Consensus 324 ~~NVia~i~G~~~-~~~~Ivl~aH~Ds~~~G------------------------------------------------- 353 (701)
..||+|+++|... +.+.|++.+|+|.++.+
T Consensus 55 ~~nvia~~~g~~~~~~~~i~l~aH~D~Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGa 134 (417)
T 1fno_A 55 KGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGK 134 (417)
T ss_dssp TCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSS
T ss_pred CceEEEEECCCCCCCCCceEEEEeccccCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCc
Confidence 4699999988642 35689999999998531
Q ss_pred ---CCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 354 ---AVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 354 ---A~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
+.|+..|+|++|++++.|.+ .+ .++++|+|+++.+||.| .|+..++++. + +..+.+++|.
T Consensus 135 t~l~~D~K~g~a~~l~a~~~l~~---~~-~~~~~v~~~~~~~EE~g-~Ga~~~~~~~---~--~~d~~i~~d~ 197 (417)
T 1fno_A 135 TLLGADDKAGVAEIMTALAVLKG---NP-IPHGDIKVAFTPDEEVG-KGAKHFDVEA---F--GAQWAYTVDG 197 (417)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHS---SS-CCCCCEEEEEESCGGGT-CTTTTCCHHH---H--CCSEEEECCC
T ss_pred cccccccHHhHHHHHHHHHHHHh---CC-CCCCcEEEEEEeccccC-CChhhhchhh---c--CCCEEEEeCC
Confidence 14555899999999998864 34 57899999999999999 8997765432 2 2334566664
No 49
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=97.57 E-value=0.0002 Score=76.86 Aligned_cols=79 Identities=25% Similarity=0.232 Sum_probs=64.0
Q ss_pred eeeeEEEEecCCCCCCcEEEEEeccCCcCC-----------------------CCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347 323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-----------------------GAVDPNSGTAALLEVAQRLNKLQKRGW 379 (701)
Q Consensus 323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-----------------------GA~DnasG~A~lLElAr~l~~~~~~g~ 379 (701)
...||+|++ |. +.+.|++.+|+|.++. |+.|+.+|++++|++++.|.+. +.
T Consensus 47 ~~~n~~a~~-g~--~~~~i~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~---~~ 120 (377)
T 3isz_A 47 DTLNLWAKH-GT--SEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKA---NP 120 (377)
T ss_dssp TBCEEEEEE-ES--SSCEEEEEEECCBCCCCCGGGCSSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CT
T ss_pred CCceEEEEe-CC--CCCEEEEeccccccCCCCcccCCCCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHh---CC
Confidence 357999998 64 3678999999998652 5569999999999988877653 44
Q ss_pred CCCCcEEEEeeCcccCCC-cchHHHHHHH
Q 005347 380 KPRRTIVLCNWDAEEYGL-IGSTEWVEEN 407 (701)
Q Consensus 380 ~p~rtI~F~~~~~EE~Gl-~GS~~~~~~~ 407 (701)
+++++|+|++..+||.|. .||..+++..
T Consensus 121 ~~~~~v~~~~~~~EE~~~~~G~~~~~~~~ 149 (377)
T 3isz_A 121 NHKGTIALLITSDEEATAKDGTIHVVETL 149 (377)
T ss_dssp TCSSEEEEEEESCSSSCCSSSHHHHHHHH
T ss_pred CCCceEEEEEEcccccCccccHHHHHHHH
Confidence 678999999999999876 6999877654
No 50
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=97.56 E-value=0.00015 Score=79.05 Aligned_cols=78 Identities=26% Similarity=0.256 Sum_probs=62.0
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCCCC---------CCC-------chHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTFGA---------VDP-------NSGTAALLEVAQRLNKLQKRGWKPRRTIVL 387 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA---------~Dn-------asG~A~lLElAr~l~~~~~~g~~p~rtI~F 387 (701)
-.||+|+++|.. +.+.|++.+|+|+++.|. .|+ -.|+|++|++++.|.+. +.+++++|+|
T Consensus 76 ~~nv~a~~~g~~-~~~~i~l~~H~D~vp~~~~~~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~---~~~~~~~v~~ 151 (404)
T 1ysj_A 76 KTGVIAEIKGRE-DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQR---RAELKGTVRF 151 (404)
T ss_dssp SSCEEEEEECSS-CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTC---GGGCSSEEEE
T ss_pred CceEEEEEeCCC-CCCEEEEEEecccccCCCCCCCCcccCCCCceEcCcChHHHHHHHHHHHHHHhc---cccCCceEEE
Confidence 369999999864 357899999999987431 111 17999999999988753 3368899999
Q ss_pred EeeCcccCCCcchHHHHHH
Q 005347 388 CNWDAEEYGLIGSTEWVEE 406 (701)
Q Consensus 388 ~~~~~EE~Gl~GS~~~~~~ 406 (701)
++..+||. ..|+..++++
T Consensus 152 ~~~~~EE~-~~G~~~~~~~ 169 (404)
T 1ysj_A 152 IFQPAEEI-AAGARKVLEA 169 (404)
T ss_dssp EEESCTTT-TCHHHHHHHT
T ss_pred EEeccccc-chhHHHHHhc
Confidence 99999998 7899998875
No 51
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=97.55 E-value=0.00023 Score=75.81 Aligned_cols=127 Identities=23% Similarity=0.249 Sum_probs=81.9
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC-----
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE----- 427 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g----- 427 (701)
.+-||-.|++++||+++.+ +...++.|++..-||.|+.|++.-.... ..+ .+|.+|+...+
T Consensus 177 ~~lDdR~g~~~~l~~l~~l--------~~~~~~~~~ft~qEEVG~~Ga~~aa~~i----~pd--~~i~vDv~~a~d~p~~ 242 (343)
T 3isx_A 177 KAMDDRIGCAVIVEVFKRI--------KPAVTLYGVFSVQEEVGLVGASVAGYGV----PAD--EAIAIDVTDSADTPKA 242 (343)
T ss_dssp SCHHHHHHHHHHHHHHHHC--------CCSSEEEEEEECCCCTTSCCSTTTGGGC----CCS--EEEEEEEEECCCSTTC
T ss_pred ccCccHHHHHHHHHHHHhc--------cCCCeEEEEEECCcccCchhHHHHhhcC----CCC--EEEEEeCcCCCCCCCc
Confidence 7889999999999988764 2368999999999999999986422221 122 35667764221
Q ss_pred -----------Ccccc-----ccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCcccc-CCCCCCchHhHHh-cC
Q 005347 428 -----------AGFHA-----SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGR-LGGGGSDYAAFIQ-HI 489 (701)
Q Consensus 428 -----------~~~~~-----~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~SD~~~F~~-~~ 489 (701)
+.+.. ..+|.+.+.+.+++++..-|.. ... .+ +|||-.++.. ..
T Consensus 243 ~~~~~~~lg~GpvI~~~d~~~~~d~~l~~~l~~~A~~~gIp~Q-----------------~~v~~g-gGTDa~~i~~a~~ 304 (343)
T 3isx_A 243 IKRHAMRLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQ-----------------MEVLTF-GGTNAMGYQRTRE 304 (343)
T ss_dssp CCTTCCCTTSCCEEECBTTCCHHHHHHHHHHHHHHHHTTCCCE-----------------ECCCBC-CCSSHHHHHHHTS
T ss_pred ccccccccCCCcEEEEcCCCCCCCHHHHHHHHHHHHHCCCCeE-----------------EecCCC-CchHHHHHHHhcC
Confidence 11111 1235666777777776443321 111 23 7999887753 36
Q ss_pred CceEEEeeeCCCCCcCCCCcccHH
Q 005347 490 GVPVADMSFGTGYPVYHSMYDDFI 513 (701)
Q Consensus 490 GIPs~~~~~~~~~~~yHT~~Dt~~ 513 (701)
|||+++++... .+.||++....
T Consensus 305 Gipt~~Igvp~--r~~Hs~~E~~~ 326 (343)
T 3isx_A 305 GIPSATVSIPT--RYVHSPSEMIA 326 (343)
T ss_dssp SCCEEEEEEEE--BSTTSTTEEEC
T ss_pred CCCEEEEcccc--ccccchhhEec
Confidence 99999997632 24788877654
No 52
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=97.53 E-value=8.9e-05 Score=79.74 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=63.3
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC---------------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCC
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF---------------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPR 382 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~---------------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~ 382 (701)
..||++ ++|. +.|++.+|+|+++. |+.|+..|++++|++++. ++
T Consensus 58 ~~~~~a-~~g~----~~i~l~~H~D~vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~----------~~ 122 (369)
T 2f7v_A 58 AVSLYA-VRGT----PKYLFNVHLDTVPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANA----------GD 122 (369)
T ss_dssp CEEEEE-EESC----CSEEEEEECCBCCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTT----------CC
T ss_pred ceEEEE-EcCC----CeEEEEeeecccCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhc----------CC
Confidence 379999 9885 46999999997521 788889999999998774 57
Q ss_pred CcEEEEeeCcccC-CCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347 383 RTIVLCNWDAEEY-GLIGSTEWVEENREMLASRAVAYLNIDS 423 (701)
Q Consensus 383 rtI~F~~~~~EE~-Gl~GS~~~~~~~~~~l~~~~va~iNlD~ 423 (701)
++|+|+++.+||. |+.|+..++++.. +.-+.|++|.
T Consensus 123 ~~v~~~~~~~EE~~g~~G~~~~~~~~~-----~~d~~i~~e~ 159 (369)
T 2f7v_A 123 GDAAFLFSSDEEANDPRCIAAFLARGL-----PYDAVLVAEP 159 (369)
T ss_dssp CCEEEEEESCTTSSSCCHHHHHHTTCC-----CCSEEEECCC
T ss_pred CCEEEEEEeCcccCCCcCHHHHHhcCC-----CCCEEEECCC
Confidence 8999999999999 8999999887642 2334455554
No 53
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=97.41 E-value=0.00027 Score=76.78 Aligned_cols=78 Identities=15% Similarity=0.007 Sum_probs=59.6
Q ss_pred eeeEEEEecCCCCCCcEEEEEeccCCcCC---CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCC-Ccc
Q 005347 324 IQNVIGIIPGTEEPDRLVILGNHRDAWTF---GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYG-LIG 399 (701)
Q Consensus 324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~---GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~G-l~G 399 (701)
-.||+|+++|.. +.+.|++.+|+|+++. +-..+. -.+++|.+|+.|.+... +++++|+|+++.+||.| ..|
T Consensus 61 ~~~via~~~g~~-~g~~i~l~ah~D~vpg~~ha~G~d~-~~a~~l~aa~~L~~~~~---~~~g~v~~~f~~~EE~~~~~G 135 (394)
T 3ram_A 61 ATGFIATYDSGL-DGPAIGFLAEYDALPGLGHACGHNI-IGTASVLGAIGLKQVID---QIGGKVVVLGCPAEEGGENGS 135 (394)
T ss_dssp EEEEEEEEECSS-SSCEEEEEECCCCCTTTSSTTCHHH-HHHHHHHHHHHHHTTHH---HHCSEEEEEECCCTTCCTTCC
T ss_pred ceEEEEEEeCCC-CCCEEEEEEecccCCCcceECCccH-HHHHHHHHHHHHHHhHh---hCCceEEEEEECCccCCCCCc
Confidence 369999999864 3689999999999982 111233 34678888888876532 57899999999999998 589
Q ss_pred hH-HHHHH
Q 005347 400 ST-EWVEE 406 (701)
Q Consensus 400 S~-~~~~~ 406 (701)
+. ..+++
T Consensus 136 a~~~~~~~ 143 (394)
T 3ram_A 136 AKASYVKA 143 (394)
T ss_dssp HHHHHHHH
T ss_pred hHHHHHHc
Confidence 99 66664
No 54
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=97.41 E-value=9e-05 Score=83.02 Aligned_cols=89 Identities=28% Similarity=0.216 Sum_probs=67.3
Q ss_pred eeeEEEEecCCC--CCCcEEEEEeccCCcCC--------------------------CCC---CCchHHHHHHHHHHHHH
Q 005347 324 IQNVIGIIPGTE--EPDRLVILGNHRDAWTF--------------------------GAV---DPNSGTAALLEVAQRLN 372 (701)
Q Consensus 324 ~~NVia~i~G~~--~~~~~Ivl~aH~Ds~~~--------------------------GA~---DnasG~A~lLElAr~l~ 372 (701)
..||+++++|+. ++.+.|++.+|+|+++. |+. |+.+|+|++|++++
T Consensus 56 ~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l~--- 132 (490)
T 3mru_A 56 TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNEDTDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVLA--- 132 (490)
T ss_dssp TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTTSCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHHH---
T ss_pred CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCCcccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHHH---
Confidence 469999999752 34678999999998743 554 88999999998652
Q ss_pred HhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCc
Q 005347 373 KLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSA 424 (701)
Q Consensus 373 ~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~ 424 (701)
....+..+|+|++..+||.|+.|+..++++. + +....+|+|..
T Consensus 133 ----~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~---~--~~~~~~~~d~~ 175 (490)
T 3mru_A 133 ----SKEIKHGPIEVLLTIDEEAGMTGAFGLEAGW---L--KGDILLNTDSE 175 (490)
T ss_dssp ----CSSCCCCSEEEEEESCSSSTTGGGGTCCSSS---C--CSSEEEECCCC
T ss_pred ----hCCCCCCCEEEEEEcccccccHhHHHhhhcc---c--CCCEEEEcCCC
Confidence 2225678999999999999999999876542 2 34456788843
No 55
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=97.30 E-value=8.8e-05 Score=82.95 Aligned_cols=76 Identities=25% Similarity=0.259 Sum_probs=60.6
Q ss_pred eeeEEEEecCCC--CCCcEEEEEeccCCcCC--------------------------CCC---CCchHHHHHHHHHHHHH
Q 005347 324 IQNVIGIIPGTE--EPDRLVILGNHRDAWTF--------------------------GAV---DPNSGTAALLEVAQRLN 372 (701)
Q Consensus 324 ~~NVia~i~G~~--~~~~~Ivl~aH~Ds~~~--------------------------GA~---DnasG~A~lLElAr~l~ 372 (701)
..||+|+++|.. ++.+.|++.+|+|.++. |+. |+..|+|++|++++.
T Consensus 53 ~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~~-- 130 (487)
T 2qyv_A 53 VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEGTNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLES-- 130 (487)
T ss_dssp TCCEEEEECCCTTCTTBCCEEEEEESCBCCC----------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHHC--
T ss_pred CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCCCccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHHh--
Confidence 369999998752 33578999999998754 444 888999999998762
Q ss_pred HhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHH
Q 005347 373 KLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEE 406 (701)
Q Consensus 373 ~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~ 406 (701)
.+ .++++|+|+++.+||.|..|+..++++
T Consensus 131 ----~~-~~~~~v~~~~~~~EE~g~~Ga~~~~~~ 159 (487)
T 2qyv_A 131 ----ND-IAHPELEVLLTMTEERGMEGAIGLRPN 159 (487)
T ss_dssp ----SS-SCCSSEEEEEESCTTTTCHHHHTCCSS
T ss_pred ----CC-CCCCCEEEEEEeccccCCHHHHHHHHh
Confidence 23 367899999999999999999987764
No 56
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=97.21 E-value=0.00061 Score=75.25 Aligned_cols=77 Identities=22% Similarity=0.190 Sum_probs=59.5
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcCCCCC----------------CC---c----hHHHHHHHHHHHHHHhHHcCCCC
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWTFGAV----------------DP---N----SGTAALLEVAQRLNKLQKRGWKP 381 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~----------------Dn---a----sG~A~lLElAr~l~~~~~~g~~p 381 (701)
.||+|+++|.. +.+.|++.+|+|.++.+-. |. + .++|++|.+|+.|.+.. .++
T Consensus 97 ~~vva~~~~~~-~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~aa~~L~~~~---~~~ 172 (445)
T 3io1_A 97 AGVVATLDTGR-PGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLGLAHVLKQYA---AQL 172 (445)
T ss_dssp CCEEEEEECSS-CCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHHHHHHHHHTG---GGC
T ss_pred CEEEEEEeCCC-CCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHHHHHHHHhCc---CcC
Confidence 58999998764 3689999999999873110 00 1 35999999999998653 368
Q ss_pred CCcEEEEeeCcccCCCcchHHHHHH
Q 005347 382 RRTIVLCNWDAEEYGLIGSTEWVEE 406 (701)
Q Consensus 382 ~rtI~F~~~~~EE~Gl~GS~~~~~~ 406 (701)
+.+|+|++..+|| |..|+...+++
T Consensus 173 ~g~v~l~f~p~EE-~~~Ga~~~i~~ 196 (445)
T 3io1_A 173 NGVIKLIFQPAEE-GTRGARAMVAA 196 (445)
T ss_dssp CSEEEEEEESCTT-TTCHHHHHHHT
T ss_pred CceEEEEEecccc-ccchHHHHHHc
Confidence 8999999999999 66899888875
No 57
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=96.87 E-value=0.0017 Score=68.11 Aligned_cols=51 Identities=10% Similarity=0.085 Sum_probs=47.0
Q ss_pred CCChhHHHHHHHHhhc-CCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeEE
Q 005347 38 LSDNVSISHHLHTLTR-RPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~-~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~v 88 (701)
.++++++.++|+.|++ .||.+||++..++++||.++|+++|+++..+.+..
T Consensus 21 ~f~~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~ 72 (309)
T 4fuu_A 21 QFDADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADL 72 (309)
T ss_dssp CCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEe
Confidence 5899999999999998 58999999999999999999999999998877764
No 58
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=96.12 E-value=0.056 Score=55.53 Aligned_cols=59 Identities=19% Similarity=0.119 Sum_probs=41.0
Q ss_pred CCCchHhHHh-cCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCCCC
Q 005347 478 GGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFLP 547 (701)
Q Consensus 478 ~~SD~~~F~~-~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~lP 547 (701)
++||-..|.. ..|||++.++-+. ...||+....+. +-....++++..++.+|..-...|
T Consensus 295 ggTDa~~~~~~~~Giptv~~G~g~--~~~Ht~~E~v~i---------~dl~~~~~ll~~~i~~L~~~d~~p 354 (354)
T 2wzn_A 295 TGTDANVMQINKEGVATAVLSIPI--RYMHSQVELADA---------RDVDNTIKLAKALLEELKPMDFTP 354 (354)
T ss_dssp CSSHHHHHHTSTTCCEEEEEEEEE--BSTTSTTCEEEH---------HHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred cccHHHHHHHhcCCCCEEEECccc--CCCCcccEEEEH---------HHHHHHHHHHHHHHHhCccccCCC
Confidence 7899876642 3699999987643 346998766542 234567889999999997755444
No 59
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=95.86 E-value=0.012 Score=67.88 Aligned_cols=89 Identities=18% Similarity=0.183 Sum_probs=64.9
Q ss_pred ceEeeEEEec---CCChhchHHHHhcCCcccceEEEEEeCCCchhhHHHHHHHcCCeEEEEEeCCCCCCCCCCCCCCCCC
Q 005347 142 TVIGPVVYVN---YGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPD 218 (701)
Q Consensus 142 ~v~g~lVyv~---~G~~~D~~~L~~~gv~v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~ 218 (701)
...-+|||.+ .+.... |....+|++||||||+.|.+.+..|..+++++||+|+|++++...
T Consensus 256 ~~~~plv~~~~~~~C~~~~---l~~~~vdl~GkIvlc~~g~~~~~~k~~~~~~~Ga~g~i~~n~~~~------------- 319 (649)
T 3i6s_A 256 VRDSPVIYNKTLSDCSSEE---LLSQVENPENTIVICDDNGDFSDQMRIITRARLKAAIFISEDPGV------------- 319 (649)
T ss_dssp EEEEEEECCTTTTTCCCHH---HHTTSSSGGGCEEEECCCSCHHHHHHHHHHHTCSEEEEECCCGGG-------------
T ss_pred CcceeeEeccccccccccc---ccccccccCCcEEEEeCCCccHHHHHHHHHhcCceEEEEecCccc-------------
Confidence 3456888865 222222 333345669999999999988889999999999999999976410
Q ss_pred CCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhhhCCCCCCCccccCHHHHHHHHHHhCCC
Q 005347 219 DKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGE 287 (701)
Q Consensus 219 ~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~~~IP~~~is~~~a~~Ll~~l~g~ 287 (701)
. . .....||++.|+.+++..|++.+...
T Consensus 320 --------~--------~-------------------------~~~~~~P~~~v~~~~g~~i~~yi~s~ 347 (649)
T 3i6s_A 320 --------F--------R-------------------------SATFPNPGVVVNKKEGKQVINYVKNS 347 (649)
T ss_dssp --------G--------G-------------------------CCCCCSCEEEECHHHHHHHHHHHHTC
T ss_pred --------c--------c-------------------------cccCcCCEEEEcHHHHHHHHHHHhcC
Confidence 0 0 01236899999999999999988643
No 60
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=95.64 E-value=0.017 Score=60.43 Aligned_cols=50 Identities=12% Similarity=0.008 Sum_probs=46.1
Q ss_pred CCChhHHHHHHHHhhcC-CCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeE
Q 005347 38 LSDNVSISHHLHTLTRR-PHVAGSEANAEAAAYVLSVFTSCSLESHIASYG 87 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~-~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~ 87 (701)
.++.+++.++|+.|++. +|.+||+++.++++||.++|+++|++++.++|.
T Consensus 21 ~~~~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~ 71 (309)
T 3tc8_A 21 DFNADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAI 71 (309)
T ss_dssp CCCHHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEee
Confidence 69999999999999874 899999999999999999999999998877765
No 61
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=95.63 E-value=0.019 Score=60.17 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=46.1
Q ss_pred CCChhHHHHHHHHhhcC-CCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeE
Q 005347 38 LSDNVSISHHLHTLTRR-PHVAGSEANAEAAAYVLSVFTSCSLESHIASYG 87 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~-~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~ 87 (701)
.++.+++.++|+.|++. +|.+||+++.++++||.++|+++|++++.++|.
T Consensus 23 ~~~~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~ 73 (314)
T 3gux_A 23 EFDADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYAD 73 (314)
T ss_dssp CCCHHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CCCHHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEee
Confidence 68999999999999986 699999999999999999999999998877765
No 62
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=95.46 E-value=0.032 Score=61.30 Aligned_cols=140 Identities=17% Similarity=0.129 Sum_probs=85.2
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchH----HHHHHHHHhhhc---------------
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREMLAS--------------- 413 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~----~~~~~~~~~l~~--------------- 413 (701)
++.||-.|+.++||..+.+ .+..++++++|+-||.|+.|++ .++++....+..
T Consensus 246 ~~lDnr~~~~~~l~al~~~--------~~~~~~~~~~~d~EEVGs~ga~gA~s~~l~~~l~ri~~~~~~~~~~~~~~~~l 317 (450)
T 2glf_A 246 YGQDDRICAYTALRALLSA--------NPEKSIGVIFFDKEEIGSDGNTGAKARFYLKALRQILKMQGAKDSEFVLDEVL 317 (450)
T ss_dssp TTHHHHHHHHHHHHHHHHC--------CCSSCEEEEEESCGGGTSCSSSSSSSSHHHHHHHHHHHHTTCSSSHHHHHHHH
T ss_pred ecchhhHHHHHHHHHHHhc--------CCCceEEEEEEcccccCCcchhhhcchhHHHHHHHHHHhhccccchHHHHHhh
Confidence 5678999999999986642 3578999999999999987754 232222111100
Q ss_pred cEEEEEEecCccc-------------------CCcccc--c---------cChhHHHHHHHHHHHcCCCCCCcchhhhcc
Q 005347 414 RAVAYLNIDSAVH-------------------EAGFHA--S---------ATPQLDELLKQAAKQVQDPDNSSQTIYDSW 463 (701)
Q Consensus 414 ~~va~iNlD~~g~-------------------g~~~~~--~---------~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~ 463 (701)
.--..|.+|+.-. |+.+.. . +++.+..++.+++++..-|.. ..
T Consensus 318 ~~s~~iS~DvahA~~Pn~~~~~~~~~~~~lg~Gpvik~~~~a~~~y~t~~~~~~~~~~~~~ia~~~~Ip~Q---~~---- 390 (450)
T 2glf_A 318 ENTSVISGDVCAAVNPPYKDVHDLHNAPKLGYGVALVKYTGARGKYSTNDAHAEFVARVRKVLNEQGVIWQ---VA---- 390 (450)
T ss_dssp HSCEEEEECCEECCCGGGGGGSCGGGCCCTTSCEEEESBCCSTTSTTCCBCCHHHHHHHHHHHHHTTCCEE---EC----
T ss_pred cCCeEEEEecccCcCCCCcccccccCCccCCcCCEEEEECCCCcccccccCCHHHHHHHHHHHHHcCCCEE---EE----
Confidence 0123456666421 211221 1 257777788888776544421 10
Q ss_pred ccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHH
Q 005347 464 TGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWM 515 (701)
Q Consensus 464 ~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i 515 (701)
.. .. ...+ +|||-.|+..+.|||+++++- +--+-||+..+...-
T Consensus 391 ~~----gr-~d~~-gGstig~i~a~~Gi~tvdiGi--P~l~MHS~~E~~~~~ 434 (450)
T 2glf_A 391 TL----GK-VDQG-GGGTIAKFFAERGSDVIDMGP--ALLGMHSPFEISSKA 434 (450)
T ss_dssp CS----SS-TTSC-CCCCTHHHHHTTTSCEEEEEC--EEBSTTSSSEEEEHH
T ss_pred Ee----cc-CCCC-CCCcHHHHHhCCCCcEEEech--hhcccchHHHHhhHH
Confidence 00 01 1133 788988888888999999974 222569999876654
No 63
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=95.43 E-value=0.025 Score=68.01 Aligned_cols=55 Identities=33% Similarity=0.434 Sum_probs=46.2
Q ss_pred eEeeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCchhhHHHHHHHcCCeEEEEEeCC
Q 005347 143 VIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDR 203 (701)
Q Consensus 143 v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvi~~~dp 203 (701)
..-++||++.|+.++.- .+++||||||++|.+.+..|+.+|.++||+|+|+|+..
T Consensus 260 ~~~~lv~~~~g~~~~~~------~~v~Gkivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~ 314 (926)
T 1xf1_A 260 KAYDYAYANRGTKEDDF------KDVKGKIALIERGDIDFKDKIAKAKKAGAVGVLIYDNQ 314 (926)
T ss_dssp CCEEEEECTTSCSTTTT------TTCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSS
T ss_pred ceEEEEECCCCCCccch------hhcCCeEEEEECCCCCHHHHHHHHHhCCCcEEEEEecC
Confidence 35689999888754421 38999999999999989999999999999999999753
No 64
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=95.24 E-value=0.047 Score=57.61 Aligned_cols=50 Identities=16% Similarity=0.380 Sum_probs=44.0
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeEE
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~v 88 (701)
.-+...+++.|+.+. .||.+||+|..++++||.++|+++|++++.++|..
T Consensus 34 ~~~~~~~~~~l~~il-~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~ 83 (330)
T 4fai_A 34 LSDKLHLREAIDKIL-IPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHD 83 (330)
T ss_dssp CCCHHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred ccHHHHHHHHHHhhc-CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeee
Confidence 567777888888873 79999999999999999999999999998888774
No 65
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=95.11 E-value=0.033 Score=58.20 Aligned_cols=47 Identities=15% Similarity=0.418 Sum_probs=40.1
Q ss_pred hhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeEE
Q 005347 41 NVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGV 88 (701)
Q Consensus 41 ~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~v 88 (701)
...+.+.|+.+. .||.+||+|..++++||.++|+++|++++.++|..
T Consensus 10 ~~~~~~~l~~il-~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~ 56 (312)
T 4f9u_A 10 EVHFNRTLDSIL-VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQ 56 (312)
T ss_dssp HHHHHHHHHHHC-SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred HHHHHHHHHHhc-CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEE
Confidence 445666677764 79999999999999999999999999998888774
No 66
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=94.43 E-value=0.061 Score=56.74 Aligned_cols=58 Identities=12% Similarity=0.096 Sum_probs=49.1
Q ss_pred hHHHHhhccCCCChhHHHH-HHHHhhcCCCCCCCHhhHHHHHHHHHHHHHC--CCceeeeeeEE
Q 005347 28 FYHSLYTSTSLSDNVSISH-HLHTLTRRPHVAGSEANAEAAAYVLSVFTSC--SLESHIASYGV 88 (701)
Q Consensus 28 ~~~~~~~~~~~i~~~~i~~-~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~--Gl~~~~~~y~v 88 (701)
+-.+.+.. .++.+++.+ +|+.+ -.+|.+||+|+.++++||.++|+++ |++++.+.|..
T Consensus 27 ~~~~~~~~--~~~~~~~~~~~L~~~-~~~R~~gS~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~ 87 (330)
T 3pb6_X 27 ARLRRVVG--QLDPQRLWSTYLRPL-LVVRTPGSPGNLQVRKFLEATLRSLTAGWHVELDPFTA 87 (330)
T ss_dssp HHHHHHHH--TCCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHHSTTCCEEEEEEEEE
T ss_pred HHHHhhcc--cCCHHHHHHHHHHHH-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEeeec
Confidence 44556777 799999987 78888 6799999999999999999999999 88888777653
No 67
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=93.87 E-value=0.09 Score=57.69 Aligned_cols=39 Identities=15% Similarity=0.199 Sum_probs=33.8
Q ss_pred CCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEeCC
Q 005347 165 VVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFTDR 203 (701)
Q Consensus 165 gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~dp 203 (701)
..+++|||||++.+.+ .+..|+.+++++||+|+|+|++.
T Consensus 269 ~~~~~gkivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~ 312 (441)
T 1y9z_A 269 CGNMANKICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNS 312 (441)
T ss_dssp CCCCTTEEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCT
T ss_pred CCCccccEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCC
Confidence 5689999999998764 55689999999999999999864
No 68
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.71 E-value=0.035 Score=61.15 Aligned_cols=141 Identities=21% Similarity=0.155 Sum_probs=78.1
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchH----HHHHHHHHhhh-----ccE-E------
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREMLA-----SRA-V------ 416 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~----~~~~~~~~~l~-----~~~-v------ 416 (701)
.+.||-.|++++|++.+.+. . .+.+++++++++-||.|..|++ .|+++....+. ... .
T Consensus 252 ~~lDdr~~~~~~l~al~~~~-----~-~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~ 325 (458)
T 1y7e_A 252 YGQDDKICVFTSLESIFDLE-----E-TPNKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKA 325 (458)
T ss_dssp SSHHHHHHHHHHHHHHSSSS-----C-CCSSCEECCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHH
T ss_pred ecCccHHHHHHHHHHHHhhh-----c-cCCceEEEEEEcccccCcccchhhccchHHHHHHHHHHhhccCCcchHHHHHH
Confidence 34579999999999866431 1 4778999999999999988875 34444433331 110 1
Q ss_pred ----EEEEecCcccC-------------------Ccccc-c----------cChhHHHHHHHHHHHcCCCCCCcchhhhc
Q 005347 417 ----AYLNIDSAVHE-------------------AGFHA-S----------ATPQLDELLKQAAKQVQDPDNSSQTIYDS 462 (701)
Q Consensus 417 ----a~iNlD~~g~g-------------------~~~~~-~----------~~p~l~~~~~~~~~~v~~p~~~~~~~~~~ 462 (701)
.+|.+|+.-.. +.+.. . +++.+...+.+++++..-|.. ..
T Consensus 326 ~~~S~~is~Dv~ha~dPn~~~~~~~~~~~~lg~G~vIk~~d~~~~~y~t~~~~~~~~~~l~~~a~~~~Ip~Q---~~--- 399 (458)
T 1y7e_A 326 LWNSKSISADVCAAINPLFSSVHDEQNAPQLGYGIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQ---VA--- 399 (458)
T ss_dssp HHHCEEEECCCEECCCC-------CTTSCCTTSCEEEEEEC-----------CHHHHHHHHHHHHHHTCCEE---EE---
T ss_pred HhcceEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeE---EE---
Confidence 56778875321 11121 1 156667777777776543321 00
Q ss_pred cccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHH
Q 005347 463 WTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIW 514 (701)
Q Consensus 463 ~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~ 514 (701)
.. +..+ .+ +||+-.+++...|||+++++. +--..||+..+...
T Consensus 400 -~~----~r~d-~~-~GgT~~~~~a~~Gi~tvdiGi--P~~~mHS~~E~~~~ 442 (458)
T 1y7e_A 400 -TL----GKVE-EG-GGGTVAKFLAGYGIRTIDMGP--AVISMHSPMEITSK 442 (458)
T ss_dssp -EE----CC-------CHHHHHHHHHHTCEEEEECC--EEBSTTSSSEEEEH
T ss_pred -Ee----eccC-CC-CcCcHHHHHhCCCCCEEEEch--hhcccchHHHHhhH
Confidence 00 0011 12 455566766668999999864 23357998877654
No 69
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=92.13 E-value=0.17 Score=53.29 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=47.5
Q ss_pred HHHhhccCCCChhHH-HHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHH--CCCceeeeeeE
Q 005347 30 HSLYTSTSLSDNVSI-SHHLHTLTRRPHVAGSEANAEAAAYVLSVFTS--CSLESHIASYG 87 (701)
Q Consensus 30 ~~~~~~~~~i~~~~i-~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~--~Gl~~~~~~y~ 87 (701)
...+.. .++.+++ .++|+.| -.+|.+||+++.++++||.++|++ .|++++.+.|.
T Consensus 21 ~~~~~~--~~~~~~~~~~~l~~L-~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~ 78 (329)
T 2afw_A 21 LRQIAE--GTSISEMWQNDLQPL-LIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFL 78 (329)
T ss_dssp HHHHHH--HCCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEE
T ss_pred HHHhhh--hcCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEE
Confidence 345666 6899999 9999999 468999999999999999999999 99988777665
No 70
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=91.98 E-value=0.1 Score=57.51 Aligned_cols=140 Identities=19% Similarity=0.196 Sum_probs=82.7
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchH----HHHHHHHHhhhccE----EE-------
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGST----EWVEENREMLASRA----VA------- 417 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~----~~~~~~~~~l~~~~----va------- 417 (701)
++-||-.|+.++|++.+.+. .+.+++++++++-||.|..|++ .|+++....+.... -.
T Consensus 258 ~~lDdr~~~~~~l~al~~~~-------~~~~~~~~~~~d~EEVGs~ga~ga~s~~l~~~l~ri~~~~~~~~~~~~~~~~~ 330 (461)
T 2glj_A 258 YGQDDRICAYTSFEAMLEMK-------NAKKTCITILVDKEEVGSIGATGMQSKFFENTVADIMSLCGDYDELKLRKALY 330 (461)
T ss_dssp TTHHHHHHHHHHHHHHHTCC-------SCSSCEEEEEECCGGGTCCTTTTSSSTTHHHHHHHHTC-----CCSCCCHHHH
T ss_pred ecchhHHHHHHHHHHHHhhc-------cCCCeEEEEEEccCCCCCccccccccchHHHHHHHHHHhcCCCchHHHHHHHh
Confidence 34589999999999866431 4778999999999999988765 34444433332100 11
Q ss_pred ---EEEecCcccC-C------------------cccc----c-------cChhHHHHHHHHHHHcCCCCCCcchhhhccc
Q 005347 418 ---YLNIDSAVHE-A------------------GFHA----S-------ATPQLDELLKQAAKQVQDPDNSSQTIYDSWT 464 (701)
Q Consensus 418 ---~iNlD~~g~g-~------------------~~~~----~-------~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~ 464 (701)
+|.+|+.-.. + .+.. . +++.+...+.+++++..-|.. .. .
T Consensus 331 ~S~~iS~Dv~ha~~pn~~~~~~~~~~~~lg~G~vIk~~~~~~g~y~~~~~~~~~~~~l~~ia~~~~Ip~Q---~~----~ 403 (461)
T 2glj_A 331 NSEMLSSDVSAAFDPNYPNVMEKRNSAYLGKGIVFNKYTGSRGKSGCNDANPEYIAELRRILSKESVNWQ---TA----E 403 (461)
T ss_dssp TCEECCBCCEEBCCTTCCTTSCSTTSBCTTSCEEEBSCCCSTTSCSSCCCCHHHHHHHHHHHHHTCCCEE---EC----C
T ss_pred cCcEEEEecccccCCCCcccccccCCcccCCCcEEEEEcCCCCccccccCCHHHHHHHHHHHHHcCCCeE---EE----e
Confidence 5666765321 1 1121 1 256777778887776544321 10 0
Q ss_pred cCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHH
Q 005347 465 GSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIW 514 (701)
Q Consensus 465 ~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~ 514 (701)
..+.+. + +||+-.+.+...|||+++++.. --.-||+..+...
T Consensus 404 ----~gr~d~-~-~GgTig~~~a~~Gi~tvdiGiP--~l~MHS~~E~~~~ 445 (461)
T 2glj_A 404 ----LGKVDQ-G-GGGTIAYILAEYGMQVIDCGVA--LLNMHAPWEISSK 445 (461)
T ss_dssp ----SSSSSS-S-CCCCTHHHHHTTTCBCCBBCCE--EESTTSSSEEEEH
T ss_pred ----eeccCC-C-CcccHHHHHhCCCCCEEEEchh--hcccchHHHHhhH
Confidence 000111 2 4555677777789999998641 2245898877654
No 71
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=91.94 E-value=0.18 Score=55.79 Aligned_cols=145 Identities=14% Similarity=0.125 Sum_probs=80.2
Q ss_pred CCCCCchHHHHHHHHHHHHHHhHHc-CCCCCCcEEEEeeCcccCCCcchHH----HHHHHHHhhhc------------cE
Q 005347 353 GAVDPNSGTAALLEVAQRLNKLQKR-GWKPRRTIVLCNWDAEEYGLIGSTE----WVEENREMLAS------------RA 415 (701)
Q Consensus 353 GA~DnasG~A~lLElAr~l~~~~~~-g~~p~rtI~F~~~~~EE~Gl~GS~~----~~~~~~~~l~~------------~~ 415 (701)
++.||-.|+.++||..+.+...... .-.+..++ +++|+-||.|+.|++- +..+....+.. .-
T Consensus 282 ~~lDnr~~~~~~leaL~~~~~~~~~~~~~~~~~v-~v~~dqEEVGs~ga~gA~s~~~pdvl~ri~~~~~~~~~~~~~l~~ 360 (496)
T 3vat_A 282 PRLDNLHSCFCALQALIDSCSAPASLAADPHVRM-IALYDNEEVGSESAQGAQSLLTELVLRRISASPQHLTAFEEAIPK 360 (496)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTSHHHHHHCCSEEE-EEEESCGGGTSCSSSSTTSTHHHHHHHHHHCCSSCTTHHHHHGGG
T ss_pred eccccHHHHHHHHHHHHhhhccccccccCCCcEE-EEEEccCCcCCCcchhccccccHHHHHHHHhccCchHHHHHHhhc
Confidence 5779999999999987765321000 00133444 9999999999876543 22221111100 00
Q ss_pred EEEEEecCcc-------------------cCCccc------cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCC
Q 005347 416 VAYLNIDSAV-------------------HEAGFH------ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSP 470 (701)
Q Consensus 416 va~iNlD~~g-------------------~g~~~~------~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~ 470 (701)
-..|.+|+.- .|+.+. ..+++.+..++.+++++..-|.. .. . .
T Consensus 361 S~~IS~DvahA~dPn~~~~~~~~~~~~LG~GpvIK~~~~~~y~t~~~~~~~l~~ia~~~~Ip~Q---~~----v-----~ 428 (496)
T 3vat_A 361 SYMISADMAHAVHPNYLDKHEENHRPLFHKGPVIKVNSKQRYASNAVSEALIREVASSVGVPLQ---DL----M-----V 428 (496)
T ss_dssp CEEEEECCEECCBTTBGGGSCTTCCCCTTSCCEEECCTTTTSCCCHHHHHHHHHHHHHHTCCCE---EE----C-----C
T ss_pred CeEEEEeCCCCCCCCCcccccccCCcccCcCCEEEEcCCCCcccCHHHHHHHHHHHHHcCCCEE---EE----E-----e
Confidence 1356777641 122221 12467788888888876554432 11 0 0
Q ss_pred ccccCCCCCCchHhHHh-cCCceEEEeeeCCCCCcCCCCcccHHH
Q 005347 471 VIGRLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFIW 514 (701)
Q Consensus 471 ~~~~~~~~~SD~~~F~~-~~GIPs~~~~~~~~~~~yHT~~Dt~~~ 514 (701)
..+ .+ +||+-.+++. +.|||+++++- +--+-||+..+...
T Consensus 429 r~D-~~-gGgTig~i~~s~~Gi~tvdIGi--P~ryMHS~~E~~~~ 469 (496)
T 3vat_A 429 RND-SP-CGTTIGPILASRLGLRVLDLGS--PQLAMHSIRETACT 469 (496)
T ss_dssp CTT-SC-CCCCHHHHHHHHHTCEEEEEEC--EEESTTSSSEEEES
T ss_pred cCC-CC-CcchHHHHHhcccCCcEEEecH--hhhccccHHHHhhH
Confidence 011 12 4566667664 47999999964 12256998877654
No 72
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=91.88 E-value=0.1 Score=56.99 Aligned_cols=140 Identities=16% Similarity=0.167 Sum_probs=82.8
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccE-------------E
Q 005347 350 WTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRA-------------V 416 (701)
Q Consensus 350 ~~~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~-------------v 416 (701)
....+.||-.|++++|++.+.+. .+..++.+++ +-||.|..|++--.....+...+++ -
T Consensus 229 I~s~~lDdr~~~~~~l~al~~~~-------~~~~~v~~~f-d~EEVGs~ga~gA~s~~~~~~l~ri~~~~~~~~~~~~~s 300 (428)
T 2ijz_A 229 IAGARLDNLLSCHAGLEALLNAE-------GDENCILVCT-DHEEVGSCSHCGADGPFLEQVLRRLLPEGDAFSRAIQRS 300 (428)
T ss_dssp SSCCCSSCSSTTTTTTTHHHHTT-------SCSSSCEEEE-CBSCTTTTCHHHHSSCCTTTSCCSSSSSSSSSTTTTTSC
T ss_pred EEeecCccHHHHHHHHHHHHhcc-------cCCceEEEEE-eccccCccchhhhhccccHHHHHHhhhhhhHHHhhhhcC
Confidence 33478899999999999877542 3456776666 9999999998753222222111222 3
Q ss_pred EEEEecCccc-------------------CCcccc------ccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCc
Q 005347 417 AYLNIDSAVH-------------------EAGFHA------SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPV 471 (701)
Q Consensus 417 a~iNlD~~g~-------------------g~~~~~------~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~ 471 (701)
.+|.+|+.-. |+.+.. .+++.+...+.+++++..-|.. .. . ..
T Consensus 301 ~~is~Dv~ha~~Pn~~~~~~~~~~~~lg~G~vIk~~~~~~~~~~~~~~~~l~~~a~~~~Ip~Q---~~----~-----~~ 368 (428)
T 2ijz_A 301 LLVSADNAHGVHPNYADRHDANHGPALNGGPVIKINSNQRYATNSETAGFFRHLCQDSEVPVQ---SF----V-----TR 368 (428)
T ss_dssp CEEEECCCCCCCSSCGGGCCSSCCCSSSCCCBCCCCSSSCCSCCHHHHTTTTHHHHHTCCCCC---BC----C-----CC
T ss_pred EEEEEecccccCCCCcccccccCCcccCCCcEEEEECCCCCCCCHHHHHHHHHHHHHcCCCeE---EE----E-----Ee
Confidence 4677787532 111111 1345566666666665443322 00 0 00
Q ss_pred cccCCCCCCchHhHHh-cCCceEEEeeeCCCCCcCCCCcccHH
Q 005347 472 IGRLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFI 513 (701)
Q Consensus 472 ~~~~~~~~SD~~~F~~-~~GIPs~~~~~~~~~~~yHT~~Dt~~ 513 (701)
...+ +|||-.++.. ..|||+++++. +--+-||+..+..
T Consensus 369 -~d~~-gGsd~g~i~~~~~Gi~tvdiGi--p~~~mHS~~E~~~ 407 (428)
T 2ijz_A 369 -SDMG-CGSTIGPITASQVGVRTVDIGL--PTFAMHSIRELAG 407 (428)
T ss_dssp -SSCC-CCCCCSTTTGGGGSCCEEEECC--CCCSCSSSSCCCC
T ss_pred -CCCC-ccchHHHHHHhCCCCCEEEEch--hhcccchHHHHhh
Confidence 1133 7899888864 57999999965 2335688776654
No 73
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=90.06 E-value=0.37 Score=49.38 Aligned_cols=49 Identities=12% Similarity=0.223 Sum_probs=42.8
Q ss_pred CCChhHHHHHHHHhhcC------CCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347 38 LSDNVSISHHLHTLTRR------PHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~------~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y 86 (701)
.++.+++.++|+.|.+. +|.+||+++.++++||+++|+++|++++.+++
T Consensus 3 ~i~~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~ 57 (284)
T 1tkj_A 3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQF 57 (284)
T ss_dssp CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred cCCHHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEe
Confidence 57889999999998862 58889999999999999999999998877655
No 74
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=87.34 E-value=0.93 Score=46.68 Aligned_cols=48 Identities=15% Similarity=0.204 Sum_probs=42.3
Q ss_pred HHHhhccCCCChhHHHHHHHHhhcCC-CCCCCHhhHHHHHHHHHHHHHCCC
Q 005347 30 HSLYTSTSLSDNVSISHHLHTLTRRP-HVAGSEANAEAAAYVLSVFTSCSL 79 (701)
Q Consensus 30 ~~~~~~~~~i~~~~i~~~l~~ls~~~-r~aGs~g~~~~a~yi~~~~~~~Gl 79 (701)
.+.++. .++.+++.+.|+.|++.+ |.++|+++.++++||+++|+++|+
T Consensus 10 ~~~~~~--~~~~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~ 58 (299)
T 1rtq_A 10 VTAWLP--QVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSA 58 (299)
T ss_dssp HHHHGG--GCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHH--hcCHHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcC
Confidence 345667 799999999999999975 889999999999999999999874
No 75
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=81.78 E-value=1.4 Score=42.45 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.++.+++.+.|+.|.+.|-.+|++++.++++||++.|+++|++++..+
T Consensus 6 ~~~~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~ 53 (198)
T 1q7l_A 6 PEEEHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVE 53 (198)
T ss_dssp -CCCCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred chhHHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEE
Confidence 467788999999999999888877788999999999999999876654
No 76
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=70.74 E-value=4 Score=43.71 Aligned_cols=47 Identities=13% Similarity=0.031 Sum_probs=39.0
Q ss_pred CChhHHHHHHHHhhcCC--------CCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 39 SDNVSISHHLHTLTRRP--------HVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 39 i~~~~i~~~l~~ls~~~--------r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
++.+++.+.|+.|++.+ |.+.|..+.++++||.++|+++|++++.+.
T Consensus 2 ~~~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~ 56 (408)
T 3n5f_A 2 IQGERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA 56 (408)
T ss_dssp -CHHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT
T ss_pred CCHHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC
Confidence 46789999999999764 455689999999999999999999876643
No 77
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=61.06 E-value=8.4 Score=40.43 Aligned_cols=46 Identities=13% Similarity=0.132 Sum_probs=39.3
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.++.+++.+.++.|.+.|-.+|. +.++++||.+.|+++|++++.+.
T Consensus 2 ~~~~~~~~~~l~~l~~~ps~s~~--e~~~~~~l~~~l~~~G~~v~~~~ 47 (373)
T 3gb0_A 2 MINQERLVNEFMELVQVDSETKF--EAEICKVLTKKFTDLGVEVFEDD 47 (373)
T ss_dssp CSCHHHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCEEEECS
T ss_pred CCCHHHHHHHHHHHhcccCCCcc--HHHHHHHHHHHHHHCCCEEEEec
Confidence 46789999999999998877765 68999999999999999876543
No 78
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=60.95 E-value=13 Score=39.24 Aligned_cols=46 Identities=11% Similarity=0.159 Sum_probs=38.4
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH-hhHHHHHHHHHHHHHCCCceeeee
Q 005347 40 DNVSISHHLHTLTRRPHVAGSE-ANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs~-g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
..+++.+.|+.|.+.|..+|.+ +..++++||++.|+++|++++..+
T Consensus 17 ~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~ 63 (393)
T 1cg2_A 17 EQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSK 63 (393)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEe
Confidence 3567888999999999888875 557899999999999999876544
No 79
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=54.01 E-value=8.1 Score=42.55 Aligned_cols=46 Identities=11% Similarity=0.183 Sum_probs=40.6
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.++.+++.+.++.|.+.|+.+|. +.++++||.+.|+++|++++.+.
T Consensus 10 ~~~~~~~~~~~~~L~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~~ 55 (490)
T 3mru_A 10 TLSPAPLWQFFDKICSIPHPSKH--EEALAQYIVTWATEQGFDVRRDP 55 (490)
T ss_dssp GSSSHHHHHHHHHHHHSCCBTTC--CTTHHHHHHHHHHHTTCEEEECT
T ss_pred ccCHHHHHHHHHHHhCCCCCCCC--HHHHHHHHHHHHHHcCCEEEEcC
Confidence 58889999999999999998886 57899999999999999876543
No 80
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=50.26 E-value=14 Score=39.70 Aligned_cols=52 Identities=10% Similarity=0.126 Sum_probs=39.3
Q ss_pred hHHHHHHHHhhcCCCCCC--------CHhhHHHHHHHHHHHHHCCCc-eeeeee-EEEEeec
Q 005347 42 VSISHHLHTLTRRPHVAG--------SEANAEAAAYVLSVFTSCSLE-SHIASY-GVSLTYP 93 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aG--------s~g~~~~a~yi~~~~~~~Gl~-~~~~~y-~v~~~~p 93 (701)
+++.+.|+.|.+.+..++ |+++.++++||.+.|+++|++ ++.++. .++..+|
T Consensus 27 ~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d~~~nv~a~~~ 88 (434)
T 3ife_A 27 EELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMDDNGYVMATLP 88 (434)
T ss_dssp HHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEECTTSCEEEEEC
T ss_pred HHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEECCCcEEEEEeC
Confidence 567888888888765555 678999999999999999996 766542 2444444
No 81
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=49.73 E-value=16 Score=39.81 Aligned_cols=46 Identities=7% Similarity=0.094 Sum_probs=38.2
Q ss_pred CChhHHHHHHHHh-hcCCC---------------CCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 39 SDNVSISHHLHTL-TRRPH---------------VAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 39 i~~~~i~~~l~~l-s~~~r---------------~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
++.+++.+.|+.| .+.+. .+.|.++.++++||.+.|+++|++++.+
T Consensus 29 ~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d 90 (474)
T 2v8h_A 29 IASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVD 90 (474)
T ss_dssp CCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEB
T ss_pred CCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 6778899999999 77654 3447899999999999999999987654
No 82
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=48.31 E-value=15 Score=40.19 Aligned_cols=45 Identities=4% Similarity=-0.116 Sum_probs=37.0
Q ss_pred ChhHHHHHHHHhhcCCCC--CCCH----hhHHHHHHHHHHHHHCCCceeee
Q 005347 40 DNVSISHHLHTLTRRPHV--AGSE----ANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~--aGs~----g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
..+++.+.++.|.+.|-. ++.+ +..++++||+++|+++|++++..
T Consensus 23 ~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~ 73 (485)
T 3dlj_A 23 HQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASV 73 (485)
T ss_dssp THHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 357788999999998877 7764 35789999999999999987654
No 83
>1q7l_B Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=48.12 E-value=36 Score=27.56 Aligned_cols=57 Identities=14% Similarity=0.123 Sum_probs=39.6
Q ss_pred CCCchHhHHhcCCceEEEeeeCCCC-CcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCC
Q 005347 478 GGSDYAAFIQHIGVPVADMSFGTGY-PVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEE 544 (701)
Q Consensus 478 ~~SD~~~F~~~~GIPs~~~~~~~~~-~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~ 544 (701)
++||-.-|.. .|||++.|+-+... ..-|+...-++ .+.+...++++..++.+++..+
T Consensus 25 g~TDar~~~~-~gip~v~fGPg~~~~~~~H~~dE~v~---------i~~l~~~~~iy~~~i~~~~~~~ 82 (88)
T 1q7l_B 25 AAGDNRYIRA-VGVPALGFSPMNRTPVLLHDHDERLH---------EAVFLRGVDIYTRLLPALASVP 82 (88)
T ss_dssp SCSHHHHHHH-TTCCEEEECCCCSCCCCTTSTTCEEE---------HHHHHHHHHHHHHHHHHHHTCC
T ss_pred eeCcHHHHHH-cCCCEEEECCCCCCcccccCCCCeeE---------HHHHHHHHHHHHHHHHHHHcCC
Confidence 7899887766 69999987654221 24577655432 2335678899999999998863
No 84
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=47.23 E-value=15 Score=38.81 Aligned_cols=46 Identities=9% Similarity=0.154 Sum_probs=39.0
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.++.+++.+.++.|.+.|-.+|. +.++++||.+.|+++|++++.+.
T Consensus 20 ~~~~~~~~~~l~~L~~ips~s~~--E~~~~~~l~~~l~~~G~~v~~~~ 65 (396)
T 3rza_A 20 MINEQRLLNTFLELVQIDSETGN--ESTIQPILKEKFIALGLDVKEDE 65 (396)
T ss_dssp CSCHHHHHHHHHHHHTSCCBTTC--TTTHHHHHHHHHHHTTCEEEECS
T ss_pred eecHHHHHHHHHHHeecCCCCcC--HHHHHHHHHHHHHHCCCEEEEec
Confidence 46788999999999999877765 57899999999999999876543
No 85
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=45.92 E-value=28 Score=29.21 Aligned_cols=80 Identities=10% Similarity=0.087 Sum_probs=46.7
Q ss_pred CCCCCChhHHHHHHHHHHHHHHHhhhcC-----CCCchhHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHhHH
Q 005347 544 EFLPFNYLSYAFELQKSTKDLENEVSGK-----GISLIPLFKSIEELAKAAAKIDNEKKAKGWASTWKKDQYKVRELNDR 618 (701)
Q Consensus 544 ~~lP~d~~~y~~~l~~~~~~l~~~~~~~-----~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~N~~ 618 (701)
.+=|=....|+..|+++.+.|+....+- +++ +|=...-.+|...-+++.+.++.. .......+.-++.+
T Consensus 5 ~~dpeElr~Fa~~L~~F~d~Lq~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f-----~e~a~e~vp~L~~~ 78 (94)
T 3fx7_A 5 QMDTEEVREFVGHLERFKELLREEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEF-----DEAAQEQIAWLKER 78 (94)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHH-----HHhhHHHhHHHHHH
Confidence 3445566778888888888887653221 133 343344444444444444433332 11235678889999
Q ss_pred HHHHHHhccCC
Q 005347 619 LMMAERAFTDR 629 (701)
Q Consensus 619 l~~~er~fl~~ 629 (701)
|.-+|..++..
T Consensus 79 i~vle~~~~~~ 89 (94)
T 3fx7_A 79 IRVLEEDYLEH 89 (94)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHhHHHHHHh
Confidence 99999887753
No 86
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=45.65 E-value=22 Score=38.52 Aligned_cols=46 Identities=4% Similarity=-0.081 Sum_probs=38.4
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH----hhHHHHHHHHHHHHHCCCceeeee
Q 005347 40 DNVSISHHLHTLTRRPHVAGSE----ANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs~----g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
..+++.+.++.|.+.|..++.+ +..++++||++.|+++|++++.++
T Consensus 18 ~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~ 67 (479)
T 2zog_A 18 NQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVD 67 (479)
T ss_dssp THHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEee
Confidence 4577889999999998887764 568999999999999999876654
No 87
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=45.53 E-value=19 Score=39.31 Aligned_cols=45 Identities=7% Similarity=0.071 Sum_probs=39.3
Q ss_pred CCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 38 LSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 38 ~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
.++.+++.+.++.|.+.|..+|. +.++++||.+.|+++|++++.+
T Consensus 7 ~~~~~~~~~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~ 51 (487)
T 2qyv_A 7 SLQPKLLWQWFDQICAIPHPSYK--EEQLAQFIINWAKTKGFFAERD 51 (487)
T ss_dssp CSSSHHHHHHHHHHHHSCCBTTC--CHHHHHHHHHHHHHTTCEEEEC
T ss_pred ccCHHHHHHHHHHHHcCCCCCCc--HHHHHHHHHHHHHHcCCEEEEc
Confidence 57788999999999999988875 5789999999999999987654
No 88
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=44.10 E-value=27 Score=39.59 Aligned_cols=35 Identities=23% Similarity=0.232 Sum_probs=28.3
Q ss_pred CCcccceEEEEEeCCCchhhHHHHHHHcCCeEEEEEeC
Q 005347 165 VVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTD 202 (701)
Q Consensus 165 gv~v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvi~~~d 202 (701)
..+++|||++++.+ ...+...+...||.|+|++..
T Consensus 277 ~~~v~gkivl~~~~---~~~~~~~~~~~Ga~gvi~~~~ 311 (621)
T 3vta_A 277 PNLLKGKIVVCEAS---FGPHEFFKSLDGAAGVLMTSN 311 (621)
T ss_dssp GGGTTTSEEECSSC---CCHHHHHHHHTTCSEEEEECS
T ss_pred cccccceEEEEecC---CChhHHhhhhcceeEEEEEec
Confidence 34799999999754 356788888999999999865
No 89
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=43.92 E-value=24 Score=38.14 Aligned_cols=44 Identities=16% Similarity=0.111 Sum_probs=36.8
Q ss_pred ChhHHHHHHHHhhcCCCCCCCH----------hhHHHHHHHHHHHHHCCCceee
Q 005347 40 DNVSISHHLHTLTRRPHVAGSE----------ANAEAAAYVLSVFTSCSLESHI 83 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs~----------g~~~~a~yi~~~~~~~Gl~~~~ 83 (701)
..+++.+.++.|.+.|..++.+ +..++++||.+.|+++|++++.
T Consensus 12 ~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~ 65 (470)
T 1lfw_A 12 KKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTEN 65 (470)
T ss_dssp THHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEE
Confidence 4577889999999988877654 5689999999999999998753
No 90
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=41.89 E-value=17 Score=36.20 Aligned_cols=43 Identities=12% Similarity=0.160 Sum_probs=35.0
Q ss_pred ChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 40 DNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
+.+++.+.++.|.+.|-.++. +..+++||++.|+++|++++..
T Consensus 4 ~~~~~~~~l~~lv~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~ 46 (268)
T 3t68_A 4 TDSPVLALAKELISRQSVTPA--DAGCQDLMIERLKALGFEIESM 46 (268)
T ss_dssp CCCHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHHTTCEECCC
T ss_pred cHHHHHHHHHHHhCCCCCCCC--chHHHHHHHHHHHHCCCeEEEE
Confidence 457788899999988877665 4568999999999999987654
No 91
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=41.81 E-value=26 Score=37.24 Aligned_cols=44 Identities=16% Similarity=0.048 Sum_probs=35.3
Q ss_pred hhHHHHHHHHhhcCCCCC--------CCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 41 NVSISHHLHTLTRRPHVA--------GSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 41 ~~~i~~~l~~ls~~~r~a--------Gs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
.+++.+.|+.|.+.+..+ -|.++.++++||++.|+++|++++.+
T Consensus 8 ~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~ 59 (423)
T 1z2l_A 8 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFD 59 (423)
T ss_dssp HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 567888899988776443 35788999999999999999987554
No 92
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=41.61 E-value=22 Score=38.03 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=34.0
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~ 83 (701)
+++.+.++.|.+.|-.+|. +.++++||+++|+++|++++.
T Consensus 26 ~~~~~~l~~l~~~ps~s~~--e~~~~~~l~~~l~~~G~~~~~ 65 (433)
T 3pfo_A 26 NDQVAFLQRMVQFRSVRGE--EAPQQEWLAQQFADRGYKVDT 65 (433)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCC--HHHHHHHHHHHHHHCCCceEE
Confidence 6678888999988877775 568999999999999998754
No 93
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=35.25 E-value=24 Score=37.50 Aligned_cols=43 Identities=5% Similarity=0.027 Sum_probs=32.7
Q ss_pred HHHHHHHHhhcCCCCC--------CCHhhHHHHHHHHHHHHHCCCc-eeeee
Q 005347 43 SISHHLHTLTRRPHVA--------GSEANAEAAAYVLSVFTSCSLE-SHIAS 85 (701)
Q Consensus 43 ~i~~~l~~ls~~~r~a--------Gs~g~~~~a~yi~~~~~~~Gl~-~~~~~ 85 (701)
++.+.|+.|.+.+-.+ .++++.++++||++.|+++|++ ++.+.
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~~ 54 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLSE 54 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEECT
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEECC
Confidence 4666777777765444 4568899999999999999998 65543
No 94
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=35.25 E-value=44 Score=34.79 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=36.1
Q ss_pred hhHHHHHHHHhhcCCCCCCCH-hhHHHHHHHHHHHHHCCCceeeee
Q 005347 41 NVSISHHLHTLTRRPHVAGSE-ANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 41 ~~~i~~~l~~ls~~~r~aGs~-g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.+++.+.++.|.+.|-.+..+ ++.++++||.+.|+++|++++...
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~~ 50 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERMD 50 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEec
Confidence 467888899999988777554 456889999999999999876543
No 95
>3c8o_A Regulator of ribonuclease activity A; RRAA, PAO1, RNAse E regulater, hydrolase regulator; HET: PGE PG4; 1.90A {Pseudomonas aeruginosa}
Probab=34.09 E-value=1.4e+02 Score=27.50 Aligned_cols=66 Identities=18% Similarity=0.323 Sum_probs=42.8
Q ss_pred ccccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCC-----CchhhHHHHHHHcCCeEEEEEe
Q 005347 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (701)
+.++.+...+-|+.+=|-+. +|-..+. .....-.|+|+++..++ ++-+.....|+++|++|+|+.-
T Consensus 23 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 94 (162)
T 3c8o_A 23 FSNFGGRDSFGGEIVTIKCF--EDNSLVKEQVDKDGKGKVLVVDGGGSLRRALLGDMLAEKAAKNGWEGIVVYG 94 (162)
T ss_dssp CEECSSCSCEEEEEEEEECS--SCCHHHHHHHTSCCBTEEEEEECTTCSSSBSCCHHHHHHHHHTTBCEEEEEE
T ss_pred cccCCCCCEEEEEEEEEEEe--CCchHHHHHHhccCCCCEEEEECCCCCCccchHHHHHHHHHHCCCeEEEecC
Confidence 44455555677887777653 2211111 12345689999999654 2234567899999999999874
No 96
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=34.08 E-value=44 Score=34.65 Aligned_cols=41 Identities=12% Similarity=0.230 Sum_probs=34.3
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
+++.+.++.|.+.|-.+|. +.++++||.+.|+++|++++.+
T Consensus 11 ~~~~~~~~~l~~~ps~s~~--e~~~~~~l~~~l~~~g~~~~~~ 51 (356)
T 3ct9_A 11 AEAVSLLKSLISIPSISRE--ETQAADFLQNYIEAEGMQTGRK 51 (356)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHhcCCCCCCC--hHHHHHHHHHHHHHCCCeEEEE
Confidence 4677888999998888775 5688999999999999987654
No 97
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=33.65 E-value=33 Score=36.35 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=33.7
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
+++.+.++.|.+.|..+|. +.++++||.+.|+++|++++.+
T Consensus 32 ~~~i~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~ 72 (404)
T 1ysj_A 32 TRLINMRRDLHEHPELSFQ--EVETTKKIRRWLEEEQIEILDV 72 (404)
T ss_dssp HHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHhcCCCCCC--hHHHHHHHHHHHHHcCCceEEe
Confidence 4567778888888888775 6789999999999999987544
No 98
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=33.40 E-value=45 Score=35.21 Aligned_cols=42 Identities=14% Similarity=0.202 Sum_probs=34.4
Q ss_pred hhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 41 NVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 41 ~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
.+++.+.+++|-+.|-+++. +.++++||.+.|+++|++++..
T Consensus 15 ~~~~~~~~~~l~~~pe~s~~--E~~~~~~i~~~l~~~G~~v~~~ 56 (394)
T 3ram_A 15 KYSYIEISHRIHERPELGNE--EIFASRTLIDRLKEHDFEIETE 56 (394)
T ss_dssp HHHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCcc--hHHHHHHHHHHHHHcCCeEEeC
Confidence 35677888888888877664 6799999999999999987654
No 99
>1q5x_A Regulator of RNAse E activity A; 3-layer sandwich, alpha-beta structure, parallel beta sheet, antiparallel beta sheet, hydrolase inhibitor; 2.00A {Escherichia coli} SCOP: c.8.7.1
Probab=33.37 E-value=1.2e+02 Score=27.74 Aligned_cols=66 Identities=20% Similarity=0.257 Sum_probs=43.1
Q ss_pred ccccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEe
Q 005347 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (701)
+.++++...+-|+.+=+-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 23 i~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~G~VidG 94 (161)
T 1q5x_A 23 FSNFGGRASFGGQIITVKCF--EDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYG 94 (161)
T ss_dssp CEECSSCSSEEEEEEEEECS--SBCHHHHHHHTSCCTTEEEEEECTTCSSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred ceECCCCCEEEEEEEEEEEe--CCcHHHHHHHhhcCCCCEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecC
Confidence 33455555677877776654 3322222 234567899999996542 224567899999999999874
No 100
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=32.84 E-value=39 Score=35.93 Aligned_cols=41 Identities=7% Similarity=0.076 Sum_probs=35.3
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
+++.+.++.|.+.|..+|. +.++++||++.|+++|++++..
T Consensus 28 ~~~i~~~~~l~~ips~s~~--e~~~~~~l~~~l~~~G~~v~~~ 68 (418)
T 1xmb_A 28 DWMVKIRRKIHENPELGYE--ELETSKLIRSELELIGIKYRYP 68 (418)
T ss_dssp HHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHHcCCeeEec
Confidence 6788889999999888875 6789999999999999997654
No 101
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=32.47 E-value=33 Score=37.25 Aligned_cols=44 Identities=23% Similarity=0.221 Sum_probs=36.6
Q ss_pred hh-HHHHHHHHhhcCCCCCCC-HhhHHHHHHHHHHHHHCCCceeee
Q 005347 41 NV-SISHHLHTLTRRPHVAGS-EANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 41 ~~-~i~~~l~~ls~~~r~aGs-~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
.+ ++.+.++.|.+.|..++. ++..++++||++.|+++|++++..
T Consensus 42 ~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~ 87 (481)
T 2pok_A 42 VAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEID 87 (481)
T ss_dssp HHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEE
T ss_pred hhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEe
Confidence 45 788899999998887764 356899999999999999987654
No 102
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=31.50 E-value=21 Score=37.43 Aligned_cols=42 Identities=14% Similarity=0.160 Sum_probs=36.0
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (701)
Q Consensus 43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y 86 (701)
.+++.|+.|++.|..+|- +.+.++|+++.++++|.+++.+.+
T Consensus 12 ~~~~~l~~L~~~pspSG~--E~~v~~~i~~~l~~~~~e~~~D~~ 53 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGR--EEEVRSIILEELEGHIDGHRIDGL 53 (343)
T ss_dssp CCHHHHHHHHHSCCBTTC--CHHHHHHHHHHHTTTCSEEEECTT
T ss_pred HHHHHHHHHHhCCCCCCc--hHHHHHHHHHHHHHhCCEEEECCC
Confidence 467889999999999998 568889999999999988876653
No 103
>1vi4_A Regulator of ribonuclease acivity A protein 1; structural genomics, unknown function; 1.87A {Vibrio cholerae} SCOP: c.8.7.1
Probab=31.39 E-value=1.4e+02 Score=27.93 Aligned_cols=66 Identities=15% Similarity=0.249 Sum_probs=42.7
Q ss_pred ccccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEe
Q 005347 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (701)
+.++.+...+-|+.+=|-+- +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 26 ~~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 97 (174)
T 1vi4_A 26 LQNFGQRSAFWGEIVTVRCY--HDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYG 97 (174)
T ss_dssp CEECSSCSCEEEEEEEEECS--SCCHHHHHHHTSCCTTEEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred ceECCCCCEEEEEEEEEEEe--CccHHHHHHHhccCCCEEEEEECCCCCCceehHHHHHHHHHHCCCeEEEecc
Confidence 44455555677877776653 2322221 224457899999996542 223567899999999999874
No 104
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=29.36 E-value=33 Score=36.02 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=35.2
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
++.+.|+.|++.|..+|. +.+.++|+++.++++|++++.+.
T Consensus 4 ~~~~~l~~L~~ips~SG~--E~~v~~~l~~~l~~~g~~~~~D~ 44 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGH--EAPVRAYLREKLTPHVDEVVTDG 44 (355)
T ss_dssp HHHHHHHHHHTSCCBTTC--CHHHHHHHHHHHGGGSSEEEECT
T ss_pred HHHHHHHHHHhCCCCCCC--HHHHHHHHHHHHHHhCCEEEECC
Confidence 466889999999999997 56889999999999999877654
No 105
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=28.83 E-value=34 Score=35.56 Aligned_cols=44 Identities=11% Similarity=0.218 Sum_probs=36.6
Q ss_pred CChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 39 SDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 39 i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
++.+++.+.|+.|.+.+-.+|. +.++++|+++.|+++|++++.+
T Consensus 3 ~~~~~~~~~l~~lv~i~s~s~~--e~~~~~~l~~~l~~~g~~~~~d 46 (349)
T 2gre_A 3 HHTKETMELIKELVSIPSPSGN--TAKIINFIENYVSEWNVETKRN 46 (349)
T ss_dssp CHHHHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHTTTSSSEEEEC
T ss_pred ccHHHHHHHHHHHHhCCCCCcc--HHHHHHHHHHHHHHhCCEEEEe
Confidence 4567888999999999887776 4578999999999999987654
No 106
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=28.59 E-value=35 Score=35.93 Aligned_cols=43 Identities=9% Similarity=0.125 Sum_probs=35.4
Q ss_pred CChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005347 39 SDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (701)
Q Consensus 39 i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~ 83 (701)
++.+++.+.++.|.+.|-.++. +.++++||.+.|+++|++++.
T Consensus 3 l~~~~~~~~l~~lv~~ps~s~~--e~~~~~~l~~~l~~~G~~~~~ 45 (393)
T 1vgy_A 3 LTETQSLELAKELISRPSVTPD--DRDCQKLMAERLHKIGFAAEE 45 (393)
T ss_dssp -CCSHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHTTTCEEEE
T ss_pred CchHHHHHHHHHHhcCCCCCCC--cHHHHHHHHHHHHHcCCcEEE
Confidence 5667889999999998877764 457899999999999998765
No 107
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=28.21 E-value=40 Score=33.49 Aligned_cols=41 Identities=10% Similarity=0.193 Sum_probs=31.3
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
+++.+.++.|-+.|-.++. +..+++||++.|+++|++++..
T Consensus 6 ~~~~~~l~~lv~ips~s~~--e~~~~~~l~~~l~~~G~~~~~~ 46 (269)
T 4h2k_A 6 EKVVSLAQDLIRRPSISPN--DEGCQQIIAERLEKLGFQIEWM 46 (269)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHhCCCCCCCC--cHHHHHHHHHHHHHcCCeEEEE
Confidence 3566777888877765554 4568999999999999987653
No 108
>1j3l_A Demethylmenaquinone methyltransferase; vitamine K2, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Thermus thermophilus} SCOP: c.8.7.1
Probab=27.52 E-value=2.1e+02 Score=26.39 Aligned_cols=65 Identities=20% Similarity=0.350 Sum_probs=41.2
Q ss_pred cccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCC-----CchhhHHHHHHHcCCeEEEEEe
Q 005347 135 HGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 135 ~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (701)
.++.+...+-|+.+=+-+. +|-..+. .....-.|+|+++..++ ++-+.....|+++|++|+|+.-
T Consensus 23 ~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 93 (164)
T 1j3l_A 23 KSFGGRARFAGRVRTLRVF--EDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVHG 93 (164)
T ss_dssp EECSSBSSEEEEEEEEECS--SBCHHHHHHHTSCCBTEEEEEECTTCCSSBSCCHHHHHHHHHTTBCEEEEES
T ss_pred eeCCCCCEEEEEEEEEEee--CCchHHHHHHhccCCCcEEEEECCCCCCceeehHHHHHHHHHCCCeEEEecC
Confidence 3444445677777766553 2211111 12345689999999653 2234567899999999999873
No 109
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=25.93 E-value=45 Score=34.94 Aligned_cols=43 Identities=16% Similarity=0.090 Sum_probs=35.6
Q ss_pred ChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347 40 DNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA 84 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~ 84 (701)
..+++.+.|+.|.+.+..+|. +.++++||++.|+++|++++.+
T Consensus 5 ~~~~~~~~l~~L~~~~s~sg~--e~~~~~~l~~~l~~~g~~~~~d 47 (373)
T 1vhe_A 5 KLDETLTMLKDLTDAKGIPGN--EREVRQVMKSYIEPFADEVTTD 47 (373)
T ss_dssp CCCHHHHHHHHHHHSCCCTTC--CHHHHHHHHHHHGGGCSEEEEC
T ss_pred HHHHHHHHHHHHHcCCCCCCc--hHHHHHHHHHHHHhhCCEEEEc
Confidence 345688899999999988886 4588999999999999987554
No 110
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=24.88 E-value=51 Score=34.07 Aligned_cols=40 Identities=10% Similarity=0.204 Sum_probs=32.7
Q ss_pred hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceee
Q 005347 42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHI 83 (701)
Q Consensus 42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~ 83 (701)
+++.+.++.|.+.|-.+|. +.++++||++.|+++|++++.
T Consensus 3 ~~~~~~~~~L~~~ps~s~~--e~~~~~~l~~~l~~~g~~~~~ 42 (377)
T 3isz_A 3 EKVVSLAQDLIRRPSISPN--DEGCQQIIAERLEKLGFQIEW 42 (377)
T ss_dssp HHHHHHHHHHHTSCCBTTC--CTTHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHhcCCCCCCC--hhhHHHHHHHHHHHCCCceEE
Confidence 5677888999988766665 457899999999999998764
No 111
>1nxj_A Probable S-adenosylmethionine:2- demethylmenaquinone methyltransferase; beta/BETA/alpha domain, structural genomics, PSI; HET: TLA; 1.90A {Mycobacterium tuberculosis} SCOP: c.8.7.1
Probab=24.39 E-value=1.5e+02 Score=27.82 Aligned_cols=66 Identities=20% Similarity=0.243 Sum_probs=41.7
Q ss_pred ccccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEe
Q 005347 134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (701)
+.++.+...+-|+.+=|-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 52 i~~~~~~~~~~G~A~TV~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 123 (183)
T 1nxj_A 52 FRQFGGRSQFAGPISTVRCF--QDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHG 123 (183)
T ss_dssp CEECSSBSCEEEEEEEEECS--SBCHHHHHHHHSCCSSCEEEEECTTCCSSEEECHHHHHHHHHHTCCEEEEEE
T ss_pred eeECCCCCEEEEEEEEEEEe--CCchHHHHHHHhcCCCCEEEEECCCCCCceeeHHHHHHHHHHCCCcEEEecc
Confidence 34455555677877776553 2211111 123456899999996542 224567899999999999874
No 112
>3noj_A 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloac decarboxylase; class II aldolase, A-B-B-A sandwich, metalloprotein, lyase; HET: PG4; 1.82A {Pseudomonas putida}
Probab=23.32 E-value=2.5e+02 Score=27.55 Aligned_cols=65 Identities=12% Similarity=0.107 Sum_probs=39.2
Q ss_pred ccCCCcceEeeEEEecCCChhchHHH-HhcCCcccceEEEEEeCC-----CchhhHHHHHHHcCCeEEEEEe
Q 005347 136 GYAKSGTVIGPVVYVNYGRVEDYVTL-KEMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 136 a~S~~G~v~g~lVyv~~G~~~D~~~L-~~~gv~v~GkIvlv~~g~-----~~~~~k~~~A~~~GA~gvi~~~ 201 (701)
++.+...+-|+.+=|-+- +.|-..+ +.....-.|.|+++..++ ++-+.....|+.+|++|+|+..
T Consensus 50 p~~~~~~~~G~A~TV~~~-p~dn~~~~~ai~~~~~G~VlVvd~~g~~~~A~~G~~la~~a~~~G~aGiVidG 120 (238)
T 3noj_A 50 PIQQGTSLAGSAVTVLVA-PGDNWMFHVAVEQCRPGDVLVVSPSSPCTDGYFGDLLATSLQARGVRALIVDA 120 (238)
T ss_dssp ESSSSCCEEEEEEEEEEC-TTBCHHHHHHHTTCCTTEEEEEEESSCCCSBCCCHHHHHHHHHTTCCEEEEEE
T ss_pred ECCCCCeEEEEEEEEEEE-CCCcHHHHHHHHhcCCCCEEEEECCCCCCeEehHHHHHHHHHHCCCcEEEeec
Confidence 344444566766655432 1221111 112335689999998664 2334567899999999999874
No 113
>2pcn_A S-adenosylmethionine:2-demethylmenaquinone methyltransferase; beta, beta alpha domain; 1.90A {Geobacillus kaustophilus}
Probab=22.26 E-value=1.7e+02 Score=26.91 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=40.3
Q ss_pred cccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEe
Q 005347 135 HGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT 201 (701)
Q Consensus 135 ~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~ 201 (701)
.++.+...+-|+.+=+-+. +|-..+. .....-.|+|+++..++. +-+.....|+++|++|+|+.-
T Consensus 22 ~~~~~~~~~~G~A~Tv~~~--~dn~~~~~al~~~~~G~VlVvd~~g~~~~a~~G~~la~~a~~~G~~GiVidG 92 (161)
T 2pcn_A 22 QSYGGKRMFSGPIATVDVF--EDNVLVREALETVPPGTVLVVDGKGSRRVALLGDRLAQIACERGLAGVIIHG 92 (161)
T ss_dssp EECSSCSCEEEEEEEEECS--SBCHHHHHHHHHSCTTCEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred eeCCCCCEEEEEEEEEEEe--cCchHHHHHHHhcCCCCEEEEECCCCCCceeehHHHHHHHHHcCCcEEEecc
Confidence 3444445677777766553 2211111 112356899999996542 224567899999999999874
No 114
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=21.80 E-value=93 Score=34.73 Aligned_cols=130 Identities=16% Similarity=0.183 Sum_probs=0.0
Q ss_pred EEEeeCcccCCCcchHHHHHHHHHhhhccEEE--------------------------EEEecCc---------------
Q 005347 386 VLCNWDAEEYGLIGSTEWVEENREMLASRAVA--------------------------YLNIDSA--------------- 424 (701)
Q Consensus 386 ~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va--------------------------~iNlD~~--------------- 424 (701)
++++||-||.|-.+.+---..+.....+++.. .|.+|+.
T Consensus 373 v~~lfD~EEIGS~s~qGA~S~fl~~~l~RI~~~~g~~~~~~~~~~~~~~~~~~la~S~~ISaDvahA~dPny~~~~d~~~ 452 (571)
T 4eme_A 373 ISIGYDHEEIGSLSEVGARSYCTKNFIDRIISSVFKKEIHEKNLSVQEIYGNLVNRSFILNVDMAHCSHPNYPETVQDNH 452 (571)
T ss_dssp EEEEESCGGGTSCSTTSTTSTHHHHHHHHHHHHHTHHHHHTSCCCHHHHHHHHHTTCEEEEECCEECCCTTCGGGSCTTS
T ss_pred EEEEecccccCCCCCCCcCChHHHHHHHHHHHhhCcccccccccccHHHHHHHHHhCeEEEEECCCCcCCCCcccccccC
Q ss_pred ----ccCCccc------cccChhHHHHHHHHHHHc------CCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHh-
Q 005347 425 ----VHEAGFH------ASATPQLDELLKQAAKQV------QDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ- 487 (701)
Q Consensus 425 ----g~g~~~~------~~~~p~l~~~~~~~~~~v------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~- 487 (701)
|.|+.+. ..+++.+..++.+++++. .-| |.....++..+ +||+-.+++.
T Consensus 453 ~~~LG~GpvIk~~~~~~y~tn~~~~~~l~~iA~~~~~~~~~gIP-------~Q~~v~rnD~~-------gGgTig~i~~s 518 (571)
T 4eme_A 453 QLFFHEGIAIKYNTNKNYVTSPLHASLIKRTFELYYNKYKQQIK-------YQNFMVKNDTP-------CGSTVGSMVAA 518 (571)
T ss_dssp CCCTTSCEEEECCTTSSSCCCHHHHHHHHHHHHHHHHHHCCCCC-------EEEECCCSSSC-------CCCCSHHHHHH
T ss_pred CcccCcCceEEEeCCCCcccCHHHHHHHHHHHHhcccccCCCCC-------EEEEEEcCCCC-------CcchHHHHHHh
Q ss_pred cCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Q 005347 488 HIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQL 540 (701)
Q Consensus 488 ~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~L 540 (701)
+.|||+++++- +--+-||+..+...-| ...+.+++..++-++
T Consensus 519 ~~GIpTvdIGi--P~ryMHS~~E~~~~~D---------v~~~vkLl~aFl~~~ 560 (571)
T 4eme_A 519 NLSMPGIDIGI--PQLAMHSIREIAAVHD---------VFFLIKGVFAFYTYY 560 (571)
T ss_dssp HHTCCEEEEEC--EEESTTSSSEEEEHHH---------HHHHHHHHHHHHHHH
T ss_pred CCCCcEEEech--hhhccchHHHHhhHHH---------HHHHHHHHHHHHHhH
No 115
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=21.72 E-value=44 Score=33.22 Aligned_cols=40 Identities=18% Similarity=0.293 Sum_probs=29.7
Q ss_pred HHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347 46 HHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (701)
Q Consensus 46 ~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y 86 (701)
+.|+.|.+.|=.+|.+ +.+.++||++.|+++|++++.+++
T Consensus 13 elL~~Lv~ipS~sg~E-~~~v~~~l~~~l~~~G~~v~~D~~ 52 (354)
T 2wzn_A 13 KLMQEIIEAPGVSGYE-HLGIRDIVVDVLKEVADEVKVDKL 52 (354)
T ss_dssp HHHHHHHHSCCBTTCG-GGTHHHHHHHHHHTTSSEEEECTT
T ss_pred HHHHHHhcCCCCCcch-HHHHHHHHHHHHHHcCCEEEEeCC
Confidence 4567777776666643 245789999999999998877654
No 116
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=21.70 E-value=1e+02 Score=33.64 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=35.4
Q ss_pred ChhHHHHHHHHhhcCCCCCCC----------HhhHHHHHHHHHHHHHCCCceee
Q 005347 40 DNVSISHHLHTLTRRPHVAGS----------EANAEAAAYVLSVFTSCSLESHI 83 (701)
Q Consensus 40 ~~~~i~~~l~~ls~~~r~aGs----------~g~~~~a~yi~~~~~~~Gl~~~~ 83 (701)
..+++.+.++.|.+.|-.++. ++..++++||++.|+++|++++.
T Consensus 32 ~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~ 85 (492)
T 3khx_A 32 YEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHD 85 (492)
T ss_dssp THHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceE
Confidence 456788889999888766554 36679999999999999998754
No 117
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=21.67 E-value=38 Score=35.49 Aligned_cols=43 Identities=16% Similarity=0.195 Sum_probs=35.3
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY 86 (701)
Q Consensus 43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y 86 (701)
.+.+.|+.|++.|..+|.+. .+.++|+++.++++|++++.+.+
T Consensus 10 ~~~~~l~~L~~ipspSG~E~-~~v~~~l~~~l~~~g~~~~~D~~ 52 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEH-LGIRDIVVDVLKEVADEVKVDKL 52 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGG-GTHHHHHHHHHHTTCSEEEECTT
T ss_pred HHHHHHHHHHhCCCCCcccH-HHHHHHHHHHHHHhCCEEEEcCC
Confidence 35678999999999999743 27889999999999998876653
No 118
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=21.10 E-value=37 Score=36.94 Aligned_cols=27 Identities=11% Similarity=0.033 Sum_probs=21.3
Q ss_pred eeEEEEecCCCCCCcEEEEEeccCCcC
Q 005347 325 QNVIGIIPGTEEPDRLVILGNHRDAWT 351 (701)
Q Consensus 325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~ 351 (701)
.||||...|....+..+|++||.|+.+
T Consensus 71 ~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 71 KAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp SCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 689999888631246899999999975
No 119
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=20.66 E-value=38 Score=34.77 Aligned_cols=41 Identities=12% Similarity=0.066 Sum_probs=33.1
Q ss_pred HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347 43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS 85 (701)
Q Consensus 43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~ 85 (701)
.+.+.|+.|.+.|..+|. +.+.++|+++.|+++|++++.++
T Consensus 18 ~~~~~l~~Lv~i~s~sg~--e~~v~~~l~~~l~~~g~~v~~d~ 58 (321)
T 3cpx_A 18 QGMQLLKELCSIHAPSGN--EEPLKDFILEYIRSNAGSWSYQP 58 (321)
T ss_dssp CHHHHHHHHHHSCCBTTC--CHHHHHHHHHHHHHHGGGSSSCC
T ss_pred HHHHHHHHHHcCCCCCCC--HHHHHHHHHHHHHhhCCeEEEcc
Confidence 367789999999888876 44679999999999999875544
Done!