Query         005347
Match_columns 701
No_of_seqs    348 out of 2532
Neff          7.5 
Searched_HMMs 13730
Date          Mon Mar 25 22:47:16 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/005347.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/005347hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d3bi1a2 c.8.4.1 (A:118-350) Gl 100.0 1.4E-47   1E-51  379.9  19.5  219   91-318     1-232 (233)
  2 d3bi1a3 c.56.5.5 (A:57-117,A:3 100.0 1.2E-44 8.6E-49  381.2  25.1  228  318-546    60-304 (304)
  3 d1de4c3 c.56.5.5 (C:122-189,C: 100.0 2.8E-44   2E-48  376.0  24.7  223  319-546    67-293 (294)
  4 d1de4c2 c.8.4.1 (C:190-382) Tr 100.0 6.9E-38   5E-42  300.8  16.0  163  133-318    29-191 (193)
  5 d1rtqa_ c.56.5.4 (A:) Aminopep 100.0 1.3E-32 9.2E-37  286.7  20.6  196  324-543    75-289 (291)
  6 d1tkja1 c.56.5.4 (A:1-277) Ami 100.0 2.6E-32 1.9E-36  282.6  20.6  195  320-542    60-277 (277)
  7 d3bi1a1 a.48.2.1 (A:594-750) G 100.0 1.1E-31 8.2E-36  254.5  12.9  147  547-698     1-155 (157)
  8 d2afwa1 c.56.5.8 (A:33-361) Gl 100.0 1.1E-30 7.7E-35  277.7  21.4  204  320-539    84-325 (329)
  9 d1de4c1 a.48.2.1 (C:609-756) T 100.0 1.1E-29   8E-34  235.9  15.1  142  548-700     1-145 (148)
 10 d1vhoa2 c.56.5.4 (A:3-69,A:153  99.7 6.9E-17   5E-21  163.3  10.4  182  322-540    41-247 (248)
 11 d1yloa2 c.56.5.4 (A:1-66,A:148  99.6   4E-16 2.9E-20  159.1  13.0  180  322-541    40-253 (264)
 12 d2fvga2 c.56.5.4 (A:1-64,A:149  99.4 1.9E-13 1.4E-17  137.6  10.3  164  323-514    38-231 (255)
 13 d1vhea2 c.56.5.4 (A:3-72,A:163  99.4 1.1E-12 7.9E-17  133.8  14.3  168  322-515    43-242 (275)
 14 d1z2la1 c.56.5.4 (A:4-212,A:33  99.3 9.3E-12 6.8E-16  126.6  14.0   81  323-406    57-143 (293)
 15 d1cg2a1 c.56.5.4 (A:26-213,A:3  99.2 9.3E-11 6.8E-15  119.5  16.5   93  324-425    67-178 (276)
 16 d2grea2 c.56.5.4 (A:3-73,A:187  99.1 5.1E-10 3.7E-14  110.9  14.3  152  323-512    45-211 (233)
 17 d1fnoa4 c.56.5.4 (A:1-207,A:32  99.1 2.8E-10   2E-14  116.2  11.8  179  323-541    54-292 (295)
 18 g1q7l.1 c.56.5.4 (A:,B:) Amino  98.9   4E-08 2.9E-12   99.6  20.0  192  323-549    51-279 (280)
 19 d1r3na1 c.56.5.4 (A:18-247,A:3  98.9 2.1E-09 1.5E-13  109.7   9.9   81  322-406    74-160 (322)
 20 d1y0ya2 c.56.5.4 (A:164-351,A:  98.4 1.5E-07 1.1E-11   93.9   7.7  137  353-515    16-169 (255)
 21 d1lfwa1 c.56.5.4 (A:1-186,A:38  98.2 8.5E-06 6.2E-10   81.7  16.3   90  325-423    67-178 (272)
 22 d1vgya1 c.56.5.4 (A:2-180,A:29  97.4 0.00044 3.2E-08   68.2  12.3   93  323-422    47-163 (262)
 23 d1tkja1 c.56.5.4 (A:1-277) Ami  96.4  0.0017 1.2E-07   64.5   6.7   50   38-87      3-58  (277)
 24 d3bi1a3 c.56.5.5 (A:57-117,A:3  96.4  0.0024 1.8E-07   64.3   7.5   56   31-88      3-59  (304)
 25 d1ysja1 c.56.5.4 (A:4-177,A:29  96.3   0.061 4.4E-06   52.3  16.9   77  325-406    50-142 (261)
 26 d1rtqa_ c.56.5.4 (A:) Aminopep  96.2   0.003 2.2E-07   63.2   6.9   57   28-86      8-65  (291)
 27 d1de4c3 c.56.5.5 (C:122-189,C:  95.8  0.0046 3.3E-07   61.8   6.1   54   27-82      4-60  (294)
 28 d1xmba1 c.56.5.4 (A:37-215,A:3  95.1    0.15 1.1E-05   49.6  14.7   76  325-407    57-149 (273)
 29 d1y7ea2 c.56.5.4 (A:4-100,A:23  93.8  0.0034 2.5E-07   63.3  -1.4  169  325-515    70-307 (322)
 30 d2afwa1 c.56.5.8 (A:33-361) Gl  93.2    0.07 5.1E-06   53.6   7.5   61   30-93     21-82  (329)
 31 d1z2la1 c.56.5.4 (A:4-212,A:33  89.2    0.23 1.6E-05   48.8   6.1   53   41-93      5-66  (293)
 32 g1q7l.1 c.56.5.4 (A:,B:) Amino  77.3     8.6 0.00063   36.7  12.0   42   43-84      5-46  (280)
 33 d1vgya1 c.56.5.4 (A:2-180,A:29  75.7     6.9 0.00051   36.6  10.7   42   42-85      3-44  (262)
 34 d1r3na1 c.56.5.4 (A:18-247,A:3  70.6     1.8 0.00013   42.5   4.9   48   38-85     12-75  (322)
 35 d1vhea2 c.56.5.4 (A:3-72,A:163  58.6     3.9 0.00028   38.6   4.6   49   43-93      4-53  (275)
 36 d2grea2 c.56.5.4 (A:3-73,A:187  58.0     3.4 0.00025   38.5   4.0   42   41-84      3-44  (233)
 37 d2fvga2 c.56.5.4 (A:1-64,A:149  50.6     3.3 0.00024   38.5   2.4   45   47-93      2-47  (255)
 38 d1cg2a1 c.56.5.4 (A:26-213,A:3  46.8      13 0.00093   35.2   6.2   44   41-84     15-59  (276)
 39 d1fnoa4 c.56.5.4 (A:1-207,A:32  39.6      11 0.00082   35.2   4.5   26   56-81     24-49  (295)
 40 d1j3la_ c.8.7.1 (A:) Demethylm  36.1      48  0.0035   28.5   7.8   66  133-200    21-92  (164)
 41 d1vi4a_ c.8.7.1 (A:) Hypotheti  34.1      47  0.0034   28.5   7.4   67  133-201    22-94  (162)
 42 d1lfwa1 c.56.5.4 (A:1-186,A:38  33.7 1.5E+02   0.011   26.8  11.9   45   40-84     12-66  (272)
 43 d1q5xa_ c.8.7.1 (A:) Regulator  33.6      50  0.0036   28.2   7.5   66  133-200    21-92  (160)
 44 d1vhoa2 c.56.5.4 (A:3-69,A:153  30.1      22  0.0016   32.5   4.7   41   44-86      3-43  (248)
 45 d1y0ya2 c.56.5.4 (A:164-351,A:  25.0     7.2 0.00052   36.7   0.0   28  319-349   227-254 (255)
 46 d1nxja_ c.8.7.1 (A:) Hypotheti  22.7      73  0.0053   27.0   6.4   66  134-201    25-96  (156)
 47 d2hi6a1 c.8.2.3 (A:1-132) Hypo  22.3      34  0.0024   28.5   3.9   38  165-203    45-86  (132)
 48 d1yloa2 c.56.5.4 (A:1-66,A:148  20.9      28  0.0021   32.0   3.5   39   46-86      4-42  (264)

No 1  
>d3bi1a2 c.8.4.1 (A:118-350) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-47  Score=379.88  Aligned_cols=219  Identities=33%  Similarity=0.637  Sum_probs=193.7

Q ss_pred             eeccc---cceEEecCCCCCceEeeecccccCCCCCCCCCCcccccccccCCCcceEeeEEEecCCChhchHHHH-hcCC
Q 005347           91 TYPVS---RSLSLTRPPPQPPITFALRQEIYEGDPYADVADEVLPTFHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVV  166 (701)
Q Consensus        91 ~~p~~---~~l~l~~~~g~~~~~~~l~e~~~~~~~~~~~~~~~~~~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv  166 (701)
                      |||..   .+++|++++|.+.|++.+.|..+++.+   ...+.+++|++||++|+|+|+|||||||+.+||++|+ ++|+
T Consensus         1 SYP~~~~pn~v~l~~~~G~~~~~~~l~E~~~~~~~---~~~~~~p~f~ays~~G~v~g~~VyvnyG~~~Df~~L~~~~gi   77 (233)
T d3bi1a2           1 SYPNKTHPNYISIINEDGNEIFNTSLFEPPPPGYE---NVSDIVPPFSAFSPQGMPEGDLVYVNYARTEDFFKLERDMKI   77 (233)
T ss_dssp             EECCTTSCCEEEEECTTSCEEEECCSSCCCCTTCT---TCCCCCCSCEETCCCBCCEECEEECTTCCHHHHHHHHHTSCC
T ss_pred             CCCCCCCCCEEEEEeCCCCEEEeecccccCCcccc---ccccccccceeeCCCCceeEEEEEecCCcHHHHHHHHHhcCC
Confidence            56743   468999888888899999998775443   4456789999999999999999999999999999997 5899


Q ss_pred             cccceEEEEEeCCCchhhHHHHHHHcCCeEEEEEeCCCCCCCCCCCCCCCCCCCCCCCCCceecce--ecCCCCCCCCCC
Q 005347          167 NVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDDARWFPDDKWMPPSGVQVGSV--YDGTGDPTTPGW  244 (701)
Q Consensus       167 ~v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~~~~yP~~~~~p~~~v~rg~v--~~~~Gdp~tPg~  244 (701)
                      +++|||||+|||+++++.|+++|+++||+|||||+||.+++...  .++||++||+|.++||||+|  +.+.|||+||||
T Consensus        78 ~~~gkIvl~ryG~~~~~~Kv~~A~~~GA~GviiysDP~d~~~~g--~~~yP~~~~~p~~~vqrgsv~~~~~~GDplTPg~  155 (233)
T d3bi1a2          78 NCSGKIVIARYGKVFRGNKVKNAQLAGAKGVILYSDPADYFAPG--VKSYPDGWNLPGGGVQRGNILNLNGAGDPLTPGY  155 (233)
T ss_dssp             CCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTT--CCBTTSSSBCCTTCCCCEECCCCTTCCSTTCTTS
T ss_pred             cccceEEEEeCCCCchhHHHHHHHHcCceEEEEecChHHccCcc--cccccCCccCCCCceeEeeeeecCCCCCCCCCCC
Confidence            99999999999999999999999999999999999998876533  36899999999999999999  345899999999


Q ss_pred             CCCCcccccChHHHhhhCCCCCCCccccCHHHHHHHHHHhCCCCCC-cccccCCCCCccccCCCC------eEEEEEEee
Q 005347          245 PSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVAN-EDWQGDKDAPIYRVGPGP------GVVNLSYTG  317 (701)
Q Consensus       245 ps~~~~~r~~~~~~~~~~~~~~IP~~~is~~~a~~Ll~~l~g~~~~-~~w~~~~~~~~~~~Gp~~------~~v~l~~~~  317 (701)
                      ||.++++|++.+++   ..+|+||++|||++||++||+.|+|..++ .+|||+|+ ++|++||++      .+|+|+|++
T Consensus       156 ps~~~~~r~~~~~~---~~lP~IP~~PIS~~dA~~lL~~L~G~~~p~~~W~G~l~-~~Y~~Gpg~~~~~s~~kv~l~V~n  231 (233)
T d3bi1a2         156 PANEYAYRRGIAEA---VGLPSIPVHPIGYYDAQKLLEKMGGSAPPDSSWRGSLK-VPYNVGPGFTGNFSTQKVKMHIHS  231 (233)
T ss_dssp             CCCTTCCCCCGGGC---SSCCSSCEEEECHHHHHHHHTTBCBBCCSSGGGCCSSS-SCCCCBSSBCGGGTTCEEEEEBCC
T ss_pred             CCCCCCcccChhHh---cCCCCCceeccCHHHHHHHHHHcCCCCCCchhccCCCC-CceecCCCccCCCCCCeEEEEEec
Confidence            99999999998765   47999999999999999999999999998 69999998 999999964      378888765


Q ss_pred             e
Q 005347          318 E  318 (701)
Q Consensus       318 ~  318 (701)
                      +
T Consensus       232 ~  232 (233)
T d3bi1a2         232 T  232 (233)
T ss_dssp             E
T ss_pred             C
Confidence            4


No 2  
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-44  Score=381.19  Aligned_cols=228  Identities=43%  Similarity=0.863  Sum_probs=201.8

Q ss_pred             eeeeeeeeeEEEEecCCCCCCcEEEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCC
Q 005347          318 EYVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGL  397 (701)
Q Consensus       318 ~~~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl  397 (701)
                      ..+..+++||||+|+|++.|+++|||+||+|||.+||+||+||+|+|||+||+|+++++.||+|+|||+||+|+|||.|+
T Consensus        60 ~~~~~~~~Nvi~~i~G~~~~~~~ii~~aH~Ds~~~Ga~D~~sG~a~lle~ar~l~~~~~~~~~p~~ti~f~~~~~EE~gl  139 (304)
T d3bi1a3          60 LLEVTRIYNVIGTLRGAVEPDRYVILGGHRDSWVFGGIDPQSGAAVVHEIVRSFGTLKKEGWRPRRTILFASWDAEEFGL  139 (304)
T ss_dssp             EEEEEEEEEEEEEECCSSEEEEEEEEEEECCCSSCCTTTTHHHHHHHHHHHHHHHHHHHTTCCCSEEEEEEEESSGGGTS
T ss_pred             ccCcceeEEEEEEEECCCCCCcEEEEEeccccccCCCCCCcchhHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCccccc
Confidence            34556789999999999888999999999999999999999999999999999999988899999999999999999999


Q ss_pred             cchHHHHHHHHHhhhccEEEEEEecCcccC-CccccccChhHHHHHHHHHHHcCCCCC--CcchhhhccccCC------C
Q 005347          398 IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASATPQLDELLKQAAKQVQDPDN--SSQTIYDSWTGSS------N  468 (701)
Q Consensus       398 ~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~~~~p~l~~~~~~~~~~v~~p~~--~~~~~~~~~~~~~------~  468 (701)
                      +||++|++++...+.+++++|||+|+.+.| ..+.+.++|.+..++.+.++.+.+|..  ...++++.|....      .
T Consensus       140 ~Gs~~~~~~~~~~~~~~~va~in~d~~~~g~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~s~~~~~~~~~~~~~~~~  219 (304)
T d3bi1a3         140 LGSTEWAEENSRLLQERGVAYINADSSIEGNYTLRVDCTPLMYSLVHNLTKELKSPDEGFEGKSLYESWTKKSPSPEFSG  219 (304)
T ss_dssp             HHHHHHHHHHHHHHHHHEEEEEECSCSBSCSSEEEEEECGGGHHHHHHHHHTSBCCSTTCTTSBHHHHHHHHSBCSSSTT
T ss_pred             cchHHHHHhChhhhhhCeEEEEeccccccCCCcceeecCHhHHHHHHHHHHhcCCCccccccchHHHHHHhhcccccccc
Confidence            999999999998889999999999999988 468889999999999999998877754  3455666665332      2


Q ss_pred             CCccccCCCCCCchHhHHhcCCceEEEeeeCC--------CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHh
Q 005347          469 SPVIGRLGGGGSDYAAFIQHIGVPVADMSFGT--------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQL  540 (701)
Q Consensus       469 ~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~--------~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~L  540 (701)
                      .+.+..++ .+|||.||++++|||++++.|..        .+|+|||++||+++|++++||+|++|.+++++++.++++|
T Consensus       220 ~~~~~~~~-~~sD~~~f~~~~GIP~v~~~~~~~~~~~~~~~~p~YHT~~DT~d~v~~~~DP~f~~~~~~a~~~~~~~~~L  298 (304)
T d3bi1a3         220 MPRISKLG-SGNDFEVFFQRLGIASGRARYTKNWETNKFSGYPLYHSVYETYELVEKFYDPMFKYHLTVAQVRGGMVFEL  298 (304)
T ss_dssp             CBCCBCCC-SSSTHHHHHHTTCCEEEEEEEECCSSSCCSCSCTTTTSTTCCHHHHHHHTCTTCHHHHHHHHHHHHHHHHH
T ss_pred             cccccCCC-CCCccHHHHHhcCCceeeeeeccCcCCCCCcCCCCCCCccccHHHHHhhcCcchHHHHHHHHHHHHHHHHH
Confidence            23445666 88999999988899999987642        4678999999999999999999999999999999999999


Q ss_pred             cCCCCC
Q 005347          541 ADEEFL  546 (701)
Q Consensus       541 a~~~~l  546 (701)
                      |++|+|
T Consensus       299 A~~pvL  304 (304)
T d3bi1a3         299 ANSIVL  304 (304)
T ss_dssp             HHCSSC
T ss_pred             hCCccC
Confidence            999986


No 3  
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.8e-44  Score=376.00  Aligned_cols=223  Identities=30%  Similarity=0.519  Sum_probs=195.5

Q ss_pred             eeeeeeeeEEEEecCCCCCCcEEEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhH-HcCCCCCCcEEEEeeCcccCCC
Q 005347          319 YVMATIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQ-KRGWKPRRTIVLCNWDAEEYGL  397 (701)
Q Consensus       319 ~~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~-~~g~~p~rtI~F~~~~~EE~Gl  397 (701)
                      ....+++||||+|+|+.+|+++||||||+|||.+||+||+||||+|||+||.|+++. +.||+|+|||+|++|+|||.|+
T Consensus        67 ~~~~~~~Nvig~i~G~~~~~~~ivigaH~Ds~~~GA~DnasG~a~llelar~l~~~~~~~g~~P~rtI~f~~~~~EE~Gl  146 (294)
T d1de4c3          67 VKEIKILNIFGVIKGFVEPDHYVVVGAQRDAWGPGAAKSGVGTALLLKLAQMFSDMVLKDGFQPSRSIIFASWSAGDFGS  146 (294)
T ss_dssp             EEEEEEEEEEEEECCSSEEEEEEEEEEECCCSSCCTTTTHHHHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEECCCTTTS
T ss_pred             ccCCccceEEEEEeCCCCCCceEEEEeecccccccccCCchhHHHHHHHHHHHHhhhhhcCCCCCceEEEEEecCccccc
Confidence            445678999999999988899999999999999999999999999999999999986 4589999999999999999999


Q ss_pred             cchHHHHHHHHHhhhccEEEEEEecCcccC-CccccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCC
Q 005347          398 IGSTEWVEENREMLASRAVAYLNIDSAVHE-AGFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLG  476 (701)
Q Consensus       398 ~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~~~~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~  476 (701)
                      +||++|++++...+..++++|||+||.+.| ..+.+.++|.+..++.+.++.+..|.. ...++....   ........+
T Consensus       147 ~GS~~~~~~~~~~l~~~~~a~iNlD~~~~g~~~~~~~~~p~l~~~~~~~~~~v~~~~~-~~~~~~~~~---~~~~~~~~~  222 (294)
T d1de4c3         147 VGATEWLEGYLSSLHLKAFTYINLDKAVLGTSNFKVSASPLLYTLIEKTMQNVKHPVT-GQFLYQDSN---WASKVEKLT  222 (294)
T ss_dssp             HHHHHHHHHSHHHHTTTEEEEEECTTCBSCSSEEEEEECGGGHHHHHHHHHHSBCTTT-CSBSCCCTT---GGGGCCCCC
T ss_pred             cCHHHHHHhChhhhccceEEEEecccCcCCCCCCceecChhHHHHHHHHHHhcCCccc-cceeeeccC---ccccccCCC
Confidence            999999999998888999999999998887 678899999999999999998887765 233332211   012234455


Q ss_pred             CCCCchHhHHhcCCceEEEeeeCC--CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCCCCC
Q 005347          477 GGGSDYAAFIQHIGVPVADMSFGT--GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADEEFL  546 (701)
Q Consensus       477 ~~~SD~~~F~~~~GIPs~~~~~~~--~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~~~l  546 (701)
                       .+|||.||++++|||++++.+..  .||+|||++||+++++++.|+.++.+.+++++++.++++||++++|
T Consensus       223 -~~sD~~pF~~~~GIP~i~~~~~~~~~~~~yHt~~DT~~~l~~~~~~~~~~~~a~A~v~~~l~~~LAn~~~l  293 (294)
T d1de4c3         223 -LDNAAFPFLAYSGIPAVSFCFCEDTDYPYLGTTMDTYKELIERIPELNKVARAAAEVAGQFVIKLTHDVEL  293 (294)
T ss_dssp             -TTSTHHHHHHTTCCCEEEEEEECSSCCTTTTSTTCSHHHHHHHCTTHHHHHHHHHHHHHHHHHHHHSSSSC
T ss_pred             -CCCCchhHHHhCCCeeEEeeccCCCCCCCCCCccccHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCcccc
Confidence             88999999988899999998753  5789999999999999899999999999999999999999999987


No 4  
>d1de4c2 c.8.4.1 (C:190-382) Transferrin receptor ectodomain, apical domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.9e-38  Score=300.75  Aligned_cols=163  Identities=29%  Similarity=0.448  Sum_probs=142.9

Q ss_pred             cccccCCCcceEeeEEEecCCChhchHHHHhcCCcccceEEEEEeCCCchhhHHHHHHHcCCeEEEEEeCCCCCCCCCCC
Q 005347          133 TFHGYAKSGTVIGPVVYVNYGRVEDYVTLKEMVVNVTGTVVLARYGQIFRGDIVHNAFEAGAAGALIFTDRKDYGGGSDD  212 (701)
Q Consensus       133 ~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~~gv~v~GkIvlv~~g~~~~~~k~~~A~~~GA~gvi~~~dp~~~~~~~~~  212 (701)
                      +|++||++|+|+|+|||||||+.+||++|   +++++|||||+|||+++++.|+.+|+++||+|||+|+||.+++..   
T Consensus        29 ~~~ays~~G~v~g~lVy~n~G~~~Df~~L---~~~v~GkI~l~r~G~~~~~~Kv~~A~~~GA~gviiysDp~d~~~~---  102 (193)
T d1de4c2          29 GYVAYSKAATVTGKLVHANFGTKKDFEDL---YTPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIV---  102 (193)
T ss_dssp             CCEETCCCEEEEECEEECSTTCHHHHHTC---SSCCTTSEEEEESCSSCHHHHHHHHHHTTCCCEEEECCTTTSCCS---
T ss_pred             ceeccCCCCceeEEEEEccCCCHHHHHHh---ccccCceEEEEeCCCCCHHHHHHHHHHcCceEEEEecCccccCCc---
Confidence            59999999999999999999999999977   899999999999999999999999999999999999999876432   


Q ss_pred             CCCCCCCCCCCCCCceecceecCCCCCCCCCCCCCCcccccChHHHhhhCCCCCCCccccCHHHHHHHHHHhCCCCCCcc
Q 005347          213 ARWFPDDKWMPPSGVQVGSVYDGTGDPTTPGWPSSEGCERLSKEEVEKAGNVPLIPSLPISAKDGETIMRSIGGEVANED  292 (701)
Q Consensus       213 ~~~yP~~~~~p~~~v~rg~v~~~~Gdp~tPg~ps~~~~~r~~~~~~~~~~~~~~IP~~~is~~~a~~Ll~~l~g~~~~~~  292 (701)
                                +.+..++|++.++.|||+||||||.++.+|...+.    ..+|+||++|||++||++||+.|+|. +|.+
T Consensus       103 ----------~~~~~~~g~~~~~~GDPlTPg~ps~~~~~~~~~~~----~~lP~IP~~PIS~~dA~~lL~~L~G~-~p~~  167 (193)
T d1de4c2         103 ----------NAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRS----SGLPNIPVQTISRAAAEKLFGNMEGD-CPSD  167 (193)
T ss_dssp             ----------CTTCCCCEECCSSSSCTTSTTSCCCGGGTCCSCCC----TTSCSSCEEECCHHHHHHHHTTBCSB-CCGG
T ss_pred             ----------CcccccccccccCCCCCCCCCcccccccccCcccc----CCCCcCCeeeCCHHHHHHHHHHcCCC-CChh
Confidence                      23355678888889999999999999887765443    46999999999999999999999985 7899


Q ss_pred             cccCCCCCccccCCCCeEEEEEEeee
Q 005347          293 WQGDKDAPIYRVGPGPGVVNLSYTGE  318 (701)
Q Consensus       293 w~~~~~~~~~~~Gp~~~~v~l~~~~~  318 (701)
                      |+|++. ..|..||+ .+|+|+|++.
T Consensus       168 W~g~~~-~~~~~G~~-~~v~l~V~N~  191 (193)
T d1de4c2         168 WKTDST-CRMVTSES-KNVKLTVSNV  191 (193)
T ss_dssp             GCCCSS-CBSSBCTT-EEEEEEECCE
T ss_pred             cCCCCc-eEEecCCC-CcEEEEEEee
Confidence            999987 78888885 4778777654


No 5  
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
Probab=100.00  E-value=1.3e-32  Score=286.72  Aligned_cols=196  Identities=24%  Similarity=0.309  Sum_probs=156.5

Q ss_pred             eeeEEEEecCCCCCCcEEEEEeccCCcC----------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcc
Q 005347          324 IQNVIGIIPGTEEPDRLVILGNHRDAWT----------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAE  393 (701)
Q Consensus       324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~----------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~E  393 (701)
                      ..||||+|+|+..++++|||+||+|||+          +||+||+||+|+|||+||.|++   .+++|+|+|+|++|++|
T Consensus        75 ~~Nvi~~~~G~~~~~~~ivv~aH~Ds~~~~~~~~~~~~~Ga~D~~sGva~~le~ar~l~~---~~~~~~~~i~f~~~~~E  151 (291)
T d1rtqa_          75 QKSVVMTITGSEAPDEWIVIGGHLDSTIGSHTNEQSVAPGADDDASGIAAVTEVIRVLSE---NNFQPKRSIAFMAYAAE  151 (291)
T ss_dssp             EEEEEEEECCSSEEEEEEEEEEECCCCSSTTCCTTCCCCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEESCG
T ss_pred             cccEEEEecCCCCCCCEEEEEeecCCCCCCCcCCCCCCCCCccchhhHHHHHHHHHHHHH---hhcCCcCceEEeccccc
Confidence            3699999999987789999999999984          4999999999999999999875   46899999999999999


Q ss_pred             cCCCcchHHHHHHHHHhhhccEEEEEEecCcccC-C--ccc---cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCC
Q 005347          394 EYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE-A--GFH---ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSS  467 (701)
Q Consensus       394 E~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~--~~~---~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~  467 (701)
                      |.|+.||++|++++... .++++++||+||+|.. .  ...   -...+.+.+++.+..+.......             
T Consensus       152 E~Gl~GS~~~~~~~~~~-~~~i~~~inlDmvg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------  217 (291)
T d1rtqa_         152 EVGLRGSQDLANQYKSE-GKNVVSALQLDMTNYKGSAQDVVFITDYTDSNFTQYLTQLMDEYLPSLT-------------  217 (291)
T ss_dssp             GGTSHHHHHHHHHHHHT-TCEEEEEEECSCCSCCCSSSSEEEECTTSCHHHHHHHHHHHHHHCTTCC-------------
T ss_pred             hhhccCcHHHHHhhhhh-cchhhhhhhhhhcccCCCCceEEEECCCCchhHHHHHHHHHHHhccccC-------------
Confidence            99999999999998765 4789999999999863 1  111   13456777777776664321100             


Q ss_pred             CCCccccCCCCCCchHhHHhcCCceEEEeeeCC---CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhcCC
Q 005347          468 NSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGT---GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLADE  543 (701)
Q Consensus       468 ~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~---~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La~~  543 (701)
                        ......+..+|||.||.+ .|||++.+....   ..++|||+.||++++    ||.+..+..++++....+++||++
T Consensus       218 --~~~~~~~~~~SDh~~F~~-~GiPav~~~~~~~~~~~~~yHT~~Dt~d~i----d~~~~~~~~~~~l~~a~~~ela~a  289 (291)
T d1rtqa_         218 --YGFDTCGYACSDHASWHN-AGYPAAMPFESKFNDYNPRIHTTQDTLANS----DPTGSHAKKFTQLGLAYAIEMGSA  289 (291)
T ss_dssp             --EEEECCSSCCSTHHHHHH-TTCCEECEESSCGGGSCTTTTSTTCCGGGS----CTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred             --ccccCCCCCCCcchhHHH-CCCCEEEeecCCCCCCCCCCCCcccchhhc----CHhHHHHHHHHHHHHHHHHHHHhc
Confidence              111223336799999998 699999875432   247899999999987    788888888999999999999875


No 6  
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]}
Probab=99.98  E-value=2.6e-32  Score=282.63  Aligned_cols=195  Identities=29%  Similarity=0.403  Sum_probs=160.2

Q ss_pred             eeeeeeeEEEEecCCCCCCcEEEEEeccCCcCC--CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCC
Q 005347          320 VMATIQNVIGIIPGTEEPDRLVILGNHRDAWTF--GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGL  397 (701)
Q Consensus       320 ~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~--GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl  397 (701)
                      ...+.+||||+|+|.+ |+++|||+||+|+|+.  ||+||+||+|++||+||.|++   .+++|+|+|+|++|++||.|+
T Consensus        60 ~~~~~~Nvi~~~~g~~-~~~~i~~~aH~D~~~~~~Ga~D~~sgva~~le~ar~l~~---~~~~~~~~i~~~~~~~EE~g~  135 (277)
T d1tkja1          60 GGATGYNLIANWPGGD-PNKVLMAGAHLDSVSSGAGINDNGSGSAAVLETALAVSR---AGYQPDKHLRFAWWGAEELGL  135 (277)
T ss_dssp             TTEEEEEEEEECSCSE-EEEEEEEEEECCCCTTSCCTTTTHHHHHHHHHHHHHHHH---TTCCCSEEEEEEEESCGGGTS
T ss_pred             cCccccCeEEEECCCC-CCCEEEEEccccccccccccCCCccchHHHHHHHHHHHh---hcCCCCcceEEeecccccccc
Confidence            3456789999999975 5899999999999986  999999999999999999875   467899999999999999999


Q ss_pred             cchHHHHHHHHHhhhccEEEEEEecCcccC-C-ccccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccC
Q 005347          398 IGSTEWVEENREMLASRAVAYLNIDSAVHE-A-GFHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRL  475 (701)
Q Consensus       398 ~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~-~~~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~  475 (701)
                      .||++|++++.....++++++||+||+|.+ . .+...+.|.+...+.+..+....+.                 .+...
T Consensus       136 ~Gs~~~~~~~~~~~~~~i~~~inlD~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~  198 (277)
T d1tkja1         136 IGSKFYVNNLPSADRSKLAGYLNFDMIGSPNPGYFVYDDDPVIEKTFKNYFAGLNVPT-----------------EIETE  198 (277)
T ss_dssp             HHHHHHHHHSCHHHHTTEEEEEEECCCCCSSCCCEECCSSHHHHHHHHHHHHHHTCCC-----------------EECCS
T ss_pred             cccHHHHHHhhccchhheeeeeccccccCCCCceEEecCChHHHHHHHHHHHhcCCCc-----------------ccccC
Confidence            999999999877777899999999999986 3 3445678888888887776543221                 11222


Q ss_pred             CCCCCchHhHHhcCCceEEEeeeCC-------------------CCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHH
Q 005347          476 GGGGSDYAAFIQHIGVPVADMSFGT-------------------GYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLV  536 (701)
Q Consensus       476 ~~~~SD~~~F~~~~GIPs~~~~~~~-------------------~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l  536 (701)
                      +..+|||.||.+ .|||++.+..+.                   ..++|||++||++++      +++.+..+++++..+
T Consensus       199 ~~~~SDh~~F~~-~GIP~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~YHt~~Dt~d~l------~~~~l~~~~~~v~~~  271 (277)
T d1tkja1         199 GDGRSDHAPFKN-VGVPVGGLFTGAGYTKSAAQAQKWGGTAGQAFDRCYHSSCDSLSNI------NDTALDRNSDAAAHA  271 (277)
T ss_dssp             STTCSTHHHHHH-TTCCEEEEECCCSSBCCHHHHHHHCSCTTSBSCTTTTSTTCSTTSC------CHHHHHHHHHHHHHH
T ss_pred             CCCCccchhHHH-CCCCEEEeecCCccccchhhhhhccccccccCCCCCCCCcCChhhC------CHHHHHHHHHHHHHH
Confidence            227899999998 699999885421                   136899999999987      356678899999999


Q ss_pred             HHHhcC
Q 005347          537 ALQLAD  542 (701)
Q Consensus       537 ~~~La~  542 (701)
                      +++||+
T Consensus       272 v~~LAn  277 (277)
T d1tkja1         272 IWTLSS  277 (277)
T ss_dssp             HHHHHC
T ss_pred             HHHHhC
Confidence            999985


No 7  
>d3bi1a1 a.48.2.1 (A:594-750) Glutamate carboxypeptidase II {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.1e-31  Score=254.54  Aligned_cols=147  Identities=32%  Similarity=0.551  Sum_probs=132.8

Q ss_pred             CCChhHHHHHHHHHHHHHHHh-------hhcCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHhHHH
Q 005347          547 PFNYLSYAFELQKSTKDLENE-------VSGKGISLIPLFKSIEELAKAAAKIDNEKKAKGWASTWKKDQYKVRELNDRL  619 (701)
Q Consensus       547 P~d~~~y~~~l~~~~~~l~~~-------~~~~~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l  619 (701)
                      |||+++|+..|++|+++|++.       ++..+++|++|.+|+.+|++++++|++++...     ...++..+|++|+||
T Consensus         1 Pfd~~~Ya~~L~~~~~~l~~~~~~~~~~l~~~~~~~~~L~~a~~~f~~aa~~~~~~~~~~-----~~~~~~~~r~~N~~L   75 (157)
T d3bi1a1           1 PFDCRDYAVVLRKYADKIYSISMKHPQEMKTYSVSFDSLFSAVKNFTEIASKFSERLQDF-----DKSNPIVLRMMNDQL   75 (157)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHHHTTCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHC-------CCHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCHHHHHHHHHHH
Confidence            999999999999999999854       34457999999999999999999999998876     345688999999999


Q ss_pred             HHHHHhccCCCCCCCCCCCceEEecCCCCCCCCCCcchhHHHHHHHHhhhc-chhcHHHHHHHHHHHHHHHHHHHHHhcc
Q 005347          620 MMAERAFTDRDGLSGRPWYKHLIYAPSKHNDYGSKYFPAIDDAIEEAMKLN-TAKSWHTVQHEVWRVSRAVRHASLVLNG  698 (701)
Q Consensus       620 ~~~er~fl~~~glp~r~~~kHvifaP~~~~~y~~~~fPgi~dai~~~~~~~-~~~~~~~~~~q~~~v~~~i~~Aa~~L~~  698 (701)
                      |++||.||++.|||||+|||||||||+.+++|++++||||+|||+.++... ..++|+.+|+||++|+.+|++|++.|+.
T Consensus        76 ~~~Er~Fl~~~GlpgR~~~kHvi~aP~~~~~y~~~~FPgi~dAi~~~~~~~~~~~~w~~~~~qi~~~~~~i~~Aa~~L~~  155 (157)
T d3bi1a1          76 MFLERAFIDPLGLPDRPFYRHVIYAPSSHNKYAGESFPGIYDALFDIESKVDPSKAWGEVKRQIYVAAFTVQAAAETLSE  155 (157)
T ss_dssp             HHHHHTTBCTTCBTTBTTCCBSSEEEETTEEEEEEESHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred             HHHHHHhcCccCCCCCCccceeeeCCCCCCCcccccchhHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999999999999875432 3468999999999999999999999975


No 8  
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97  E-value=1.1e-30  Score=277.68  Aligned_cols=204  Identities=20%  Similarity=0.180  Sum_probs=145.7

Q ss_pred             eeeeeeeEEEEecCCCCCCcEEEEEeccCCcC---------CCCCCCchHHHHHHHHHHHHHHhHHc-----CCCCCCcE
Q 005347          320 VMATIQNVIGIIPGTEEPDRLVILGNHRDAWT---------FGAVDPNSGTAALLEVAQRLNKLQKR-----GWKPRRTI  385 (701)
Q Consensus       320 ~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~---------~GA~DnasG~A~lLElAr~l~~~~~~-----g~~p~rtI  385 (701)
                      ...+..||||+++|..  +++|||+|||||++         +||+||+||||+|||+||.|+++.+.     +.+|+|+|
T Consensus        84 ~~~~~~Nvia~l~g~~--~~~ili~aHyDs~~~~~~~~~~~pGA~DnaSGvA~lLElAR~l~~~~~~~~~~~~~~p~~tI  161 (329)
T d2afwa1          84 GYRSFSNIISTLNPTA--KRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSL  161 (329)
T ss_dssp             SSEEEEEEEEESSTTS--SEEEEEEEECCCCCCCCBTTBCCCCTTTTHHHHHHHHHHHHHTHHHHHTTC------CCEEE
T ss_pred             CCceeEEEEEEeCCCC--CceEEEEeeeccCCcccccccCCCCCCCccHHHHHHHHHHHHHHHhhhhhhhcccCCCCceE
Confidence            3467899999999964  78999999999986         49999999999999999999988654     45899999


Q ss_pred             EEEeeCcccCC--------CcchHHHHHHHHHhh----------hccEEEEEEecCcccC-Cccc--cccChhHHHHHHH
Q 005347          386 VLCNWDAEEYG--------LIGSTEWVEENREML----------ASRAVAYLNIDSAVHE-AGFH--ASATPQLDELLKQ  444 (701)
Q Consensus       386 ~F~~~~~EE~G--------l~GS~~~~~~~~~~l----------~~~~va~iNlD~~g~g-~~~~--~~~~p~l~~~~~~  444 (701)
                      +|++|+|||.|        ++||++|++++...+          ..++.++||+||+|.+ ..+.  ...++.....+.+
T Consensus       162 ~fv~f~gEE~G~~~~~~~~l~GS~~~a~~~~~~~~~~~~~~~~~~~~i~~~inlD~ig~~~~~~~~~~~~~~~~~~~~~~  241 (329)
T d2afwa1         162 QLIFFDGEEAFLHWSPQDSLYGSRHLAAKMASTPHPPGARGTSQLHGMDLLVLLDLIGAPNPTFPNFFPNSARWFERLQA  241 (329)
T ss_dssp             EEEEESCCSCSSSCCSSSSCHHHHHHHHHHHTSBSSTTCSSCBTTTTEEEEEEECSCCSSSCCBCCCCGGGHHHHHHHHH
T ss_pred             EEEEecccccccccccccccccHHHHHHHhhhcccccccccccchhceeeeeeeccccCCCCceeEeecccchHhHHHHH
Confidence            99999999999        899999999876542          3679999999999976 3332  2333333333332


Q ss_pred             H---HHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCC
Q 005347          445 A---AKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDP  521 (701)
Q Consensus       445 ~---~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp  521 (701)
                      .   .+.......  ......+..     .....+..+|||.||.+ .|||++++.....+++|||+.||+++|+     
T Consensus       242 i~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~~SDH~pF~~-~GIP~~~~~~~~~~~~yHt~~Dt~d~ld-----  308 (329)
T d2afwa1         242 IEHELHELGLLKD--HSLEGRYFQ-----NYSYGGVIQDDHIPFLR-RGVPVLHLIPSPFPEVWHTMDDNEENLD-----  308 (329)
T ss_dssp             HHHHHHHTTCSSS--CCSTTCSBC-----SCCCCSCCCSTTHHHHT-TTCCEEEECCSSCCTTTTSTTCSSTTCC-----
T ss_pred             HHHHHHHhhhhcc--ccccccccc-----cccCCCCCCCchHHHHH-CCCCEEEEEcCCCCCCCCCCcCchhhCC-----
Confidence            2   222211100  011111110     01111225799999998 6999999976555568999999999873     


Q ss_pred             chHHHHHHHHHHHHHHHH
Q 005347          522 TFQRHVAAASMWGLVALQ  539 (701)
Q Consensus       522 ~~~~~~~~a~~~~~l~~~  539 (701)
                       +..+..+++++..++++
T Consensus       309 -~~~l~~v~~~l~~~v~e  325 (329)
T d2afwa1         309 -ESTIDNLNKILQVFVLE  325 (329)
T ss_dssp             -HHHHHHHHHHHHHHHHH
T ss_pred             -HHHHHHHHHHHHHHHHH
Confidence             34567788888887775


No 9  
>d1de4c1 a.48.2.1 (C:609-756) Transferrin receptor ectodomain, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.96  E-value=1.1e-29  Score=235.87  Aligned_cols=142  Identities=20%  Similarity=0.335  Sum_probs=130.8

Q ss_pred             CChhHHHHHHHHHHHHHHH---hhhcCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHhHHHHHHHH
Q 005347          548 FNYLSYAFELQKSTKDLEN---EVSGKGISLIPLFKSIEELAKAAAKIDNEKKAKGWASTWKKDQYKVRELNDRLMMAER  624 (701)
Q Consensus       548 ~d~~~y~~~l~~~~~~l~~---~~~~~~~~~~~l~~a~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~er  624 (701)
                      +|+..|++.|.++++++++   .++..+++|++|.+|+.+|.++|++|++++...     +..++..+|++|+|||++||
T Consensus         1 LD~~~Ya~~L~~~~~~l~~~~~~l~~~~isl~~L~~Ai~~f~~AA~~f~~~~~~~-----~~~~~~~~R~~N~~l~~~Er   75 (148)
T d1de4c1           1 LDYERYNSQLLSFVRDLNQYRADIKEMGLSLQWLYSARGDFFRATSRLTTDFGNA-----EKTDRFVMKKLNDRVMRVEY   75 (148)
T ss_dssp             CCGGGHHHHHHHHHHHHHTTHHHHHHTTCCSHHHHHHHHHHHHHHHHHHHHHHTS-----CTTCTTHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-----ccCCHHHHHHHHHHHHHHHH
Confidence            5899999999999999985   355678999999999999999999999999876     34578899999999999999


Q ss_pred             hccCCCCCCCCCCCceEEecCCCCCCCCCCcchhHHHHHHHHhhhcchhcHHHHHHHHHHHHHHHHHHHHHhcccC
Q 005347          625 AFTDRDGLSGRPWYKHLIYAPSKHNDYGSKYFPAIDDAIEEAMKLNTAKSWHTVQHEVWRVSRAVRHASLVLNGKL  700 (701)
Q Consensus       625 ~fl~~~glp~r~~~kHvifaP~~~~~y~~~~fPgi~dai~~~~~~~~~~~~~~~~~q~~~v~~~i~~Aa~~L~~~~  700 (701)
                      .||+|+|+|+|+|||||||||+.+      +||||.|||...+.+...++|+.+++||++|+++|++|+++|.|++
T Consensus        76 ~fl~~~glp~r~~~rHvi~~p~~~------~fPgi~dai~~~~~~~~~~~~~~v~~qls~~t~~i~~Aa~~L~g~~  145 (148)
T d1de4c1          76 HFLSPYVSPKESPFRHVFWGSGSH------TLPALLENLKLRKQNNGAFNETLFRNQLALATWTIQGAANALSGDV  145 (148)
T ss_dssp             TTBCTTSCTTTCCCCBTTTSCSTT------SHHHHHHHHHHTSSCSSCCCHHHHHHHHHHHHHHHHHHHHHHTCSG
T ss_pred             HhcCccCCCCCCccceeeeCCCCC------CCccHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence            999999999999999999999864      6999999999998888888999999999999999999999999975


No 10 
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=99.66  E-value=6.9e-17  Score=163.34  Aligned_cols=182  Identities=18%  Similarity=0.197  Sum_probs=123.5

Q ss_pred             eeeeeEEEEecCCCCCCcEEEEEeccCCcCC------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEe
Q 005347          322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWTF------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCN  389 (701)
Q Consensus       322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~  389 (701)
                      ....||||+++|..  ++.|+++||+|+++.            +|.||++|++++||++|.|.+     .+|+++|.|++
T Consensus        41 d~~gNvia~~~g~~--~~~i~l~aH~D~v~~~~~~~~~~~~~~~a~Dd~~G~a~~l~~~~~l~~-----~~~~~~v~~~~  113 (248)
T d1vhoa2          41 TRHGSLIGYKKGKG--IGKLAFFAHVDEIIDQTAFETNGKVVGKALDNRASCGVLVKVLEFLKR-----YDHPWDVYVVF  113 (248)
T ss_dssp             CTTSCEEEEECCSS--SCEEEEEEECCBCECCCCEEETTEEEETTHHHHHHHHHHHHHHHHHTT-----CCCSSEEEEEE
T ss_pred             ecCCcEEEEecCCC--CceEEEeccccceecccccccCCceeccCCcccHhHHHHHHHHHHHhh-----cCCCCceEEEE
Confidence            45679999999875  467999999999853            588999999999999999864     26889999999


Q ss_pred             eCcccCCCcchHHHHHHHHHhhhccEEEEEE----ecCcccC-------C--ccccccChhHHHHHHHHHHHcCCCCCCc
Q 005347          390 WDAEEYGLIGSTEWVEENREMLASRAVAYLN----IDSAVHE-------A--GFHASATPQLDELLKQAAKQVQDPDNSS  456 (701)
Q Consensus       390 ~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iN----lD~~g~g-------~--~~~~~~~p~l~~~~~~~~~~v~~p~~~~  456 (701)
                      +.+||.|+.||..+.+....    .....++    .|..+.+       +  ......++.+.+.+.+.++....|..  
T Consensus       114 ~~~EE~G~~Ga~~~~~~~~~----~~~~~~d~~~~~d~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~a~~~~i~~~--  187 (248)
T d1vhoa2         114 SVQEETGCLGALTGAYEINP----DAAIVMDVTFASEPPFSDHIELGKGPVIGLGPVVDRNLVQKIIEIAKKHNVSLQ--  187 (248)
T ss_dssp             ECTTSSSHHHHHHTTCCCCC----SEEEEEEEECCCCTTSCCCCCTTSCCEEECSTTSCHHHHHHHHHHHHHTTCCCE--
T ss_pred             eecccCCCCcceehhhcccc----cccceeceeccccCCCCccccccceeEEeccccCCHHHHHHHHHHHHhcCCcce--
Confidence            99999999999886554432    2222333    2322221       1  11233456777888888776543321  


Q ss_pred             chhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHH
Q 005347          457 QTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLV  536 (701)
Q Consensus       457 ~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l  536 (701)
                      ..            .....+..++|+..|.. .|||++.++.  ++.++||+.|+.+..+         ...+++++..+
T Consensus       188 ~~------------~~~~~~g~d~d~~~~~~-~Gip~~~i~~--p~~y~Hs~~E~~~~~D---------~~~~~~ll~~~  243 (248)
T d1vhoa2         188 EE------------AVGGRSGTETDFVQLVR-NGVRTSLISI--PLKYMHTPVEMVDPRD---------VEELARLLSLV  243 (248)
T ss_dssp             EE------------SSCCC----CTTHHHHH-TTCEEEEEEE--ECBSTTSTTEEECHHH---------HHHHHHHHHHH
T ss_pred             ee------------eeecCCCCcHHHHHHhc-CCCCEEEeCc--CcccCCCcceeeeHHH---------HHHHHHHHHHH
Confidence            00            01111226789999988 6999999976  3456799999876532         23556676666


Q ss_pred             HHHh
Q 005347          537 ALQL  540 (701)
Q Consensus       537 ~~~L  540 (701)
                      +.+|
T Consensus       244 i~~l  247 (248)
T d1vhoa2         244 AVEL  247 (248)
T ss_dssp             HHHC
T ss_pred             HHhc
Confidence            6554


No 11 
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}
Probab=99.64  E-value=4e-16  Score=159.08  Aligned_cols=180  Identities=16%  Similarity=0.132  Sum_probs=126.6

Q ss_pred             eeeeeEEEEecCCCCCCcEEEEEeccCCcCC-------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEE
Q 005347          322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWTF-------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLC  388 (701)
Q Consensus       322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~  388 (701)
                      ....||+|+++|..  ++.|++++|+|++..             +|.||++|++++||++|.|.+     .+++++|.|+
T Consensus        40 D~~gNi~~~~~~~~--~~~v~~~~H~D~~~~~~~~~~~~~~i~g~a~D~~~gva~lle~~r~l~~-----~~~~~~v~~~  112 (264)
T d1yloa2          40 DGLGSVLIRLNEST--GPKVMICAHMDEVFDTTFQVLPHQRVMGKAFDDRLSCYLLVTLLRELHD-----AELPAEVWLV  112 (264)
T ss_dssp             CTTCCEEEECCCCS--SCEEEEEEECCCCECCCCEEETTTEEEETTHHHHHHHHHHHHHHHHHTT-----CCCSSEEEEE
T ss_pred             cCCCcEEEEECCCC--CceEEEecCcCccccccceeccccccccccccccccHHHHHHHHHHHhc-----CCCCceEEEE
Confidence            35679999998764  578999999999963             799999999999999998864     3678999999


Q ss_pred             eeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCC----------------cc-----ccccChhHHHHHHHHHH
Q 005347          389 NWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEA----------------GF-----HASATPQLDELLKQAAK  447 (701)
Q Consensus       389 ~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~----------------~~-----~~~~~p~l~~~~~~~~~  447 (701)
                      ++.+||.|+.||..+...+.    ..  ..+++|+...+.                .+     ....+|.+...+.+.++
T Consensus       113 ~~~~EE~G~~Ga~~~~~~~~----~~--~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~  186 (264)
T d1yloa2         113 ASSSEEVGLRGGQTATRAVS----PD--VAIVLDTACWAKNFDYGAANHRQIGNGPMLVLSDKSLIAPPKLTAWIETVAA  186 (264)
T ss_dssp             EESCCTTSSHHHHHHHHHHC----CS--EEEEECCCCCSSTTCCSTTCCCCTTSCCEEEEECSSCBCCHHHHHHHHHHHH
T ss_pred             EEeccccCCCCccccccccc----cc--cccccccccccCCCCCCccccccccccceEEeecccchhHHHHHHHHHHhhh
Confidence            99999999999998776542    22  345566543210                00     12246788888888888


Q ss_pred             HcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCCcCCCCcccHHHHHhhCCCchHHHH
Q 005347          448 QVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYPVYHSMYDDFIWMEKFGDPTFQRHV  527 (701)
Q Consensus       448 ~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~i~~~~dp~~~~~~  527 (701)
                      ....+..       .       ......| ..+|+.+|.+ .|||++.++.  +..++||+.|+.+..+         ..
T Consensus       187 ~~~i~~q-------~-------~~~~~~g-~d~d~~~~~~-~GIp~~~i~~--p~~y~Hs~~e~~~~~D---------~~  239 (264)
T d1yloa2         187 EIGVPLQ-------A-------DMFSNGG-TDGGAVHLTG-TGVPTLVMGP--ATRHGHCAASIADCRD---------IL  239 (264)
T ss_dssp             HHTCCCE-------E-------EECSSCC-CHHHHHHTST-TCCCEEEEEC--CCBSCSSSCEEEEHHH---------HH
T ss_pred             hcCCCce-------E-------eecCCCC-CCchHHHHhc-CCCCEEEECc--CccccCChhhhccHHH---------HH
Confidence            7644321       0       0011222 4567777877 6999999975  3456899999987653         23


Q ss_pred             HHHHHHHHHHHHhc
Q 005347          528 AAASMWGLVALQLA  541 (701)
Q Consensus       528 ~~a~~~~~l~~~La  541 (701)
                      .+++++..++-.|.
T Consensus       240 ~~~~l~~~~i~~ld  253 (264)
T d1yloa2         240 QMEQLLSALIQRLT  253 (264)
T ss_dssp             HHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHcC
Confidence            45666666655543


No 12 
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}
Probab=99.41  E-value=1.9e-13  Score=137.61  Aligned_cols=164  Identities=21%  Similarity=0.184  Sum_probs=99.7

Q ss_pred             eeeeEEEEecCCCCCCcEEEEEeccCCcC------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEee
Q 005347          323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNW  390 (701)
Q Consensus       323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~  390 (701)
                      ...||+++++|.+. ++.|+++||+|+++            .|+.||.+|++++||++|.+.       ++.++|.|+++
T Consensus        38 ~~gNii~~~~G~~~-~~~i~l~aH~Dtv~~~~~~~~~~~~~~ga~Dd~~Gva~~l~~~~~~~-------~~~~~i~~~~t  109 (255)
T d2fvga2          38 VLGNLIALKRGRDS-SKKLLVSAHMDEVFVSDYIEKNGRAVGKAFDDRAGCSVLIDVLESGV-------SPAYDTYFVFT  109 (255)
T ss_dssp             TTSCEEEEECCSEE-EEEEEEEEECCBCECCCCEEETTEEEESCHHHHHHHHHHHHHHHTCC-------CCSEEEEEEEE
T ss_pred             CCCCEEEEecCCCC-CCceEEEecccccccceeccccccccCCcccchHhHHHHHHHHHHhc-------ccccceEEEEE
Confidence            45799999999763 67899999999985            299999999999999988542       57789999999


Q ss_pred             CcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccC-----------Ccc-----ccccChhHHHHHHHHHHHcCCCCC
Q 005347          391 DAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHE-----------AGF-----HASATPQLDELLKQAAKQVQDPDN  454 (701)
Q Consensus       391 ~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-----------~~~-----~~~~~p~l~~~~~~~~~~v~~p~~  454 (701)
                      ++||.|+.|+..+...........+.+....|..+..           ..+     ....++.+.+.+.+.++....+..
T Consensus       110 ~~EE~G~~g~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~i~~~a~~~g~~~~  189 (255)
T d2fvga2         110 VQEETGLRGSAVVVEQLKPTCAIVVETTTAGDNPELEERKWATHLGDGPAITFYHRGYVIPKEIFQTIVDTAKNNDIPFQ  189 (255)
T ss_dssp             CCCC-----CHHHHHHHCCSEEEEEEEEEECSCSTTCCSSSSCCTTSCCEECSCCSSSCCCHHHHHHHHHHHHHTTCCCE
T ss_pred             eecccCCcchhhhhhhhhhhhhhhhcccccccccCCccccccceeccccceeeccCCCcCCHHHHHHHHHHHHHhCCcee
Confidence            9999999999877665433222222233344444321           011     112345677777777765433211


Q ss_pred             CcchhhhccccCCCCCccccCCCCCCchHhH--HhcCCceEEEeeeCCCCCcCCCCcccHHH
Q 005347          455 SSQTIYDSWTGSSNSPVIGRLGGGGSDYAAF--IQHIGVPVADMSFGTGYPVYHSMYDDFIW  514 (701)
Q Consensus       455 ~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F--~~~~GIPs~~~~~~~~~~~yHT~~Dt~~~  514 (701)
                                     ..... + .++|..++  .. .|||+++++..  ..++||+.++.+.
T Consensus       190 ---------------~~~~~-~-~gtd~~~~~~~~-~Gi~t~~i~~p--~~~~Hs~~E~~~~  231 (255)
T d2fvga2         190 ---------------MKRRT-A-GGTDAGRYARTA-YGVPAGVISTP--ARYIHSPNSIIDL  231 (255)
T ss_dssp             ---------------ECCCC----------------CCSCEEEEEEE--EEESSTTCEEEEH
T ss_pred             ---------------EEecc-C-CCcchHHHHHhC-CCCcEEEECcc--cccCcCcceeeeH
Confidence                           00111 1 44555444  44 69999999763  4568999998764


No 13 
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]}
Probab=99.39  E-value=1.1e-12  Score=133.84  Aligned_cols=168  Identities=18%  Similarity=0.174  Sum_probs=110.4

Q ss_pred             eeeeeEEEEecCCCCCCcEEEEEeccCCcCC--------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005347          322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWTF--------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVL  387 (701)
Q Consensus       322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~--------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F  387 (701)
                      ....||||+++|... .+.|+|++|+|+++.              |+.||.+|++++|+++|.|.+.     ++.++|.|
T Consensus        43 D~~gN~i~~~~g~~~-~~~i~l~~H~D~v~~~~~~~~~~~~~~~~~~~Dd~~Gva~~l~~~~~l~~~-----~~~~~v~~  116 (275)
T d1vhea2          43 DRLGSLIAKKTGAEN-GPKIMIAGHLDEVPHFEFTVMNNEKFLLAKAWDNRIGCAIAIDVLRNLQNT-----DHPNIVYG  116 (275)
T ss_dssp             CTTCCEEEEEESSTT-SCEEEEEEECCCCECCCCEECSSTTEEEETTHHHHHHHHHHHHHHHHHHTS-----CCSSEEEE
T ss_pred             eCCCcEEEEecCCCC-CCceeeeccccccccccceeeecccccccCcccCccCHHHHHHHHHHHhcC-----CCCceEEE
Confidence            355699999999753 678999999999852              8999999999999999988653     67889999


Q ss_pred             EeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcc-----------cCCc-----cccccChhHHHHHHHHHHHcCC
Q 005347          388 CNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAV-----------HEAG-----FHASATPQLDELLKQAAKQVQD  451 (701)
Q Consensus       388 ~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g-----------~g~~-----~~~~~~p~l~~~~~~~~~~v~~  451 (701)
                      +++..||.|+.|+..+...+.......+......+...           .+..     ......+.+.+.+.+.++....
T Consensus       117 ~~~~~EE~G~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~i~~~a~~~~~  196 (275)
T d1vhea2         117 VGTVQEEVGLRGAKTAAHTIQPDIAFGVDVGIAGDTPGISEKEAQSKMGKGPQIIVYDASMVSHKGLRDAVVATAEEAGI  196 (275)
T ss_dssp             EEESCCTTTSHHHHHHHHHHCCSEEEEEEEEECCCSTTCCTTTCCCCTTSCCEEEEEETTEECCHHHHHHHHHHHHHHTC
T ss_pred             EEecccccCCcchhhhhhcchhhhhhhccccccccCCCccccccccccCCccceeeccCcccCCHHHHHHHHHHHHhhCc
Confidence            99999999999998876654332111111111111111           0010     1122345666667666665432


Q ss_pred             CCCCcchhhhccccCCCCCccc-cCCCCCCchHhHHh-cCCceEEEeeeCCCCCcCCCCcccHHHH
Q 005347          452 PDNSSQTIYDSWTGSSNSPVIG-RLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDFIWM  515 (701)
Q Consensus       452 p~~~~~~~~~~~~~~~~~~~~~-~~~~~~SD~~~F~~-~~GIPs~~~~~~~~~~~yHT~~Dt~~~i  515 (701)
                      +..                 .. ..+ .+||..+|.. ..|||++.++..  ..++||+.++.+..
T Consensus       197 ~~~-----------------~~~~~~-~gtd~~~~~~~~~Gi~~~~i~~~--~~~~Hs~~E~i~~~  242 (275)
T d1vhea2         197 PYQ-----------------FDAIAG-GGTDSGAIHLTANGVPALSITIA--TRYIHTHAAMLHRD  242 (275)
T ss_dssp             CCE-----------------EEEETT-CCCTHHHHTTSTTCCCEEEEEEE--EBSTTSSCEEEEHH
T ss_pred             ceE-----------------EEecCC-CCChhHHHHHhCCCCCEEEeCcc--cccCCCccceecHH
Confidence            211                 11 122 5677666542 269999999763  45789999987643


No 14 
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]}
Probab=99.29  E-value=9.3e-12  Score=126.61  Aligned_cols=81  Identities=28%  Similarity=0.365  Sum_probs=71.4

Q ss_pred             eeeeEEEEecCCCCCCcEEEEEeccCCcCC-CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCccc-----CC
Q 005347          323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEE-----YG  396 (701)
Q Consensus       323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE-----~G  396 (701)
                      .+.||+|+++|++++.+.|++|+|+|+++. |+.|++.|+++.||++|.|.+   .|.+|+|+|.+++|.+||     .+
T Consensus        57 ~~GNvig~~~G~~~~~~~v~iGSHlDtV~~gG~~Dg~~Gv~a~le~~~~l~~---~~~~~~~~i~vv~f~~EEg~rFg~~  133 (293)
T d1z2la1          57 EVGNLYGRLNGTEYPQEVVLSGSHIDTVVNGGNLDGQFGALAAWLAIDWLKT---QYGAPLRTVEVVAMAEEEGSRFPYV  133 (293)
T ss_dssp             TTSCEEEEECCSSEEEEEEEEEEECCCCTTBCSSTTHHHHHHHHHHHHHHHH---HHCSCSEEEEEEEESCSSCCSSSCS
T ss_pred             cCCcEEEEEeccCCCCceeEeeeecccCCCCCCCCCchhHHHHHHHHHHHHh---cCCCCCCCceeeeeecccccccCcc
Confidence            457999999998766789999999999988 999999999999999998875   456899999999999999     45


Q ss_pred             CcchHHHHHH
Q 005347          397 LIGSTEWVEE  406 (701)
Q Consensus       397 l~GS~~~~~~  406 (701)
                      ++||+.+.-.
T Consensus       134 ~~GS~~~~G~  143 (293)
T d1z2la1         134 FWGSKNIFGL  143 (293)
T ss_dssp             CHHHHHHTTC
T ss_pred             cccchhhcCC
Confidence            7899988644


No 15 
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=99.21  E-value=9.3e-11  Score=119.52  Aligned_cols=93  Identities=26%  Similarity=0.338  Sum_probs=77.8

Q ss_pred             eeeEEEEecCCCCCCcEEEEEeccCCcC-------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCc
Q 005347          324 IQNVIGIIPGTEEPDRLVILGNHRDAWT-------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRT  384 (701)
Q Consensus       324 ~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rt  384 (701)
                      ..||+++++|+.  .+.|++.+|+|+++                   .|+.|+.+|++++|+++|.|.+   .+.+|+++
T Consensus        67 ~~nv~a~~~g~~--~~~vll~~H~DtV~~~~~w~~~Pf~~~~~~l~G~G~~D~k~g~a~~l~a~~~l~~---~~~~~~~~  141 (276)
T d1cg2a1          67 GDNIVGKIKGRG--GKNLLLMSHMDTVYLKGILAKAPFRVEGDKAYGPGIADDKGGNAVILHTLKLLKE---YGVRDYGT  141 (276)
T ss_dssp             SEEEEEEEECSS--CCCEEEEEECCBSCCTTHHHHSCCEEETTEEECTTTTTTHHHHHHHHHHHHHHHH---TTCCCSSE
T ss_pred             CCEEEEEECCCC--CCeEEEEecccccccccccCCCcceeecCeeeecccccccccHHHHHHHHHHHHH---cCCCCCCC
Confidence            469999999875  46799999999762                   3999999999999999998875   45689999


Q ss_pred             EEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcc
Q 005347          385 IVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAV  425 (701)
Q Consensus       385 I~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g  425 (701)
                      |.|+++++||.|+.||++|++++..    +..+.|+++-..
T Consensus       142 i~~~~~~~EE~g~~g~~~~~~~~~~----~~d~~i~~Ept~  178 (276)
T d1cg2a1         142 ITVLFNTDEEKGSFGSRDLIQEEAK----LADYVLSFEPTS  178 (276)
T ss_dssp             EEEEEESCGGGTTTTTHHHHHHHHH----HCSEEEECCCEE
T ss_pred             EEEEEEcccccccccHHHHHHhccc----cCCEEEEecCCC
Confidence            9999999999999999999988653    234668887543


No 16 
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=99.07  E-value=5.1e-10  Score=110.90  Aligned_cols=152  Identities=22%  Similarity=0.193  Sum_probs=97.8

Q ss_pred             eeeeEEEEecCCCCCCcEEEEEeccCCcCCCCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHH
Q 005347          323 TIQNVIGIIPGTEEPDRLVILGNHRDAWTFGAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTE  402 (701)
Q Consensus       323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~  402 (701)
                      ...|++++++|... .+.|++.+|+|.      ||.+|+|++||++|.|.+.   +.+|+++|.|+++..||.|+.|+..
T Consensus        45 ~~gniia~~~G~~~-~~~i~~~aH~Dt------~dk~g~a~~l~~~~~l~~~---~~~~~~~i~~~ft~~EE~G~~Ga~~  114 (233)
T d2grea2          45 NKGALILTVKGKND-AQHRLLTAHVDT------LDKVSVAILLKLIKRLQDE---NVTLPYTTHFLISNNEEIGYGGNSN  114 (233)
T ss_dssp             SSSCEEEEECCSEE-EEEEEEEEECCB------CTHHHHHHHHHHHHHHHHH---TCCCSEEEEEEEESCC----CCCCC
T ss_pred             cCCCEEEEecCCCc-cccEEEEeccCc------cccCcHHHHHHHHHHHHHC---CCCCCceEEEEEEeCcccCchhHHh
Confidence            45699999999753 578999999996      6889999999999998753   4589999999999999999999865


Q ss_pred             HHHHHHHhhhccEEEEEEecCcccCC---------cccc-----ccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCC
Q 005347          403 WVEENREMLASRAVAYLNIDSAVHEA---------GFHA-----SATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSN  468 (701)
Q Consensus       403 ~~~~~~~~l~~~~va~iNlD~~g~g~---------~~~~-----~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~  468 (701)
                      +.        .++...|.+|+...++         .+.+     -.+|.+.+.+.+++++-.-|..              
T Consensus       115 ~~--------~~~~~~iavD~~~~~d~~~~~~~g~~i~~~d~~~~~~~~l~~~l~~~A~~~~I~~Q--------------  172 (233)
T d2grea2         115 IP--------EETVEYLAVDMGALGDGQASDEYTVSICAKDSSGPYHYALRKHLVELAKTNHIEYK--------------  172 (233)
T ss_dssp             CC--------TTEEEEEEECCCCCSCC--CCTTSEEEEEEETTEECCHHHHHHHHHHHHHHTCCEE--------------
T ss_pred             hc--------cCCcccEEEEeccCCCCCCCCCCCeEEEEecCccccCHHHHHHHHHHHHHcCCCcE--------------
Confidence            32        3456678888765431         1111     1256788888888776433321              


Q ss_pred             CCccccCCCCCCchHhHHh-cCCceEEEeeeCCCCCcCCCCcccH
Q 005347          469 SPVIGRLGGGGSDYAAFIQ-HIGVPVADMSFGTGYPVYHSMYDDF  512 (701)
Q Consensus       469 ~~~~~~~~~~~SD~~~F~~-~~GIPs~~~~~~~~~~~yHT~~Dt~  512 (701)
                         ...+..++||..++.. ..|||++.++.  +..+.|| +.+.
T Consensus       173 ---~~v~~~ggTDa~~~~~~g~gi~~~~i~~--p~ry~Hs-~E~~  211 (233)
T d2grea2         173 ---VDIYPYYGSDASAAIRAGFDVKHALIGA--GIDSSHA-FERT  211 (233)
T ss_dssp             ---EEECSCC--------CCSSSCEEEEEEE--CCBSTTS-SEEE
T ss_pred             ---EeecCCCCchHHHHHHhCCCCCEEEEcc--Ccccccc-ceec
Confidence               1111126899987654 14699999987  3445687 5554


No 17 
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=99.05  E-value=2.8e-10  Score=116.24  Aligned_cols=179  Identities=18%  Similarity=0.147  Sum_probs=122.4

Q ss_pred             eeeeEEEEecCCCC-CCcEEEEEeccCCcCC-------------------------------------------------
Q 005347          323 TIQNVIGIIPGTEE-PDRLVILGNHRDAWTF-------------------------------------------------  352 (701)
Q Consensus       323 ~~~NVia~i~G~~~-~~~~Ivl~aH~Ds~~~-------------------------------------------------  352 (701)
                      ...|+++.+.|... ..+.+++.+|+|+++.                                                 
T Consensus        54 ~~g~~~~~~~~~~~~~~~~v~~~~H~Dtv~~~~~~~~~p~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g  133 (295)
T d1fnoa4          54 EKGTLMATLPANVEGDIPAIGFISHVDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDG  133 (295)
T ss_dssp             TTCCEEEEECCSSCSCCCCEEEEEECCBCTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCS
T ss_pred             CCCcEEEEecccCCCCCcceEEEEEeCCcCCcCccccCceeecccCCCceeccccccccCccccCCceEEeCCcEEECCc
Confidence            44688888877542 2467999999998753                                                 


Q ss_pred             ---CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCcccCCc
Q 005347          353 ---GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVHEAG  429 (701)
Q Consensus       353 ---GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g~~  429 (701)
                         .+.||.+|+++++|++|.+.+.   + .|.++|.|+++..||.|+.|+....+.    +  +....||+|+.+.+..
T Consensus       134 ~~~~~~D~k~G~aa~l~a~~~l~~~---~-~~~~~v~~~~t~~EE~~~gg~~~~~~~----~--~~~~~i~~D~~~~~~~  203 (295)
T d1fnoa4         134 KTLLGADDKAGVAEIMTALAVLKGN---P-IPHGDIKVAFTPDEEVGKGAKHFDVEA----F--GAQWAYTVDGGGVGEL  203 (295)
T ss_dssp             SSCCCHHHHHHHHHHHHHHHHHHSS---S-CCCCCEEEEEESCGGGTCTTTTCCHHH----H--CCSEEEECCCCSTTBE
T ss_pred             eeeecccchhhHHHHHHHHHHHHhc---C-CCCCceecccccceecCcchhhccHhH----c--CCcEEEEecCCCcccc
Confidence               1469999999999999987643   3 467899999999999998777543332    2  2346789999877621


Q ss_pred             -------cccccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCC
Q 005347          430 -------FHASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGY  502 (701)
Q Consensus       430 -------~~~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~  502 (701)
                             .....+|.+.+.+.++++...-|                 +.....+ ++||+..|.. .|||++.++..  .
T Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-----------------~~~~~~~-g~sD~~~~~~-~Gip~~~lg~~--~  262 (295)
T d1fnoa4         204 EFENNMREKVVEHPHILDIAQQAMRDCHIT-----------------PEMKPIR-GGTDGAQLSF-MGLPCPNLFTG--G  262 (295)
T ss_dssp             ECCBCCHHHHHTSTHHHHHHHHHHHHTTCC-----------------CBCCCBS-SCCHHHHHTT-TTCCCCEECCS--E
T ss_pred             ceeeeccccccCCHHHHHHHHHHHHhcCCC-----------------ceEeecC-CCCHHHHHHh-cCCCEEEEccC--C
Confidence                   11234456667777777664332                 2234445 7899999977 79999997653  3


Q ss_pred             CcCCCCcccHHHHHhhCCCchHHHHHHHHHHHHHHHHhc
Q 005347          503 PVYHSMYDDFIWMEKFGDPTFQRHVAAASMWGLVALQLA  541 (701)
Q Consensus       503 ~~yHT~~Dt~~~i~~~~dp~~~~~~~~a~~~~~l~~~La  541 (701)
                      .++||+.+..+.         +-..+.++++..++...|
T Consensus       263 ~~~Ht~~E~v~i---------~dl~~~~~ll~~~i~~~a  292 (295)
T d1fnoa4         263 YNYHGKHEFVTL---------EGMEKAVQVIVRIAELTA  292 (295)
T ss_dssp             ESTTSTTCEEEH---------HHHHHHHHHHHHHHHHHH
T ss_pred             ccCCCCccEEEH---------HHHHHHHHHHHHHHHHHh
Confidence            478999876542         224456666666655443


No 18 
>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.88  E-value=4e-08  Score=99.59  Aligned_cols=192  Identities=23%  Similarity=0.284  Sum_probs=117.0

Q ss_pred             eeeeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347          323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGW  379 (701)
Q Consensus       323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~  379 (701)
                      .-.||+++++|.++..+.|++.+|+|.++                       .|+.|+.+|++++|+++|.|.+   .+.
T Consensus        51 g~~~v~~~~~g~~~~~~~ill~~H~DvvP~~~~~W~~~Pf~~~~~~dg~iyGRGa~D~K~~~~~~l~a~~~l~~---~~~  127 (280)
T g1q7l.1          51 GYVVTVLTWPGTNPTLSSILLNSHTDVVPVFKEHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKV---EGH  127 (280)
T ss_dssp             TEEEEEEEECCSSTTSCEEEEEEECCBCCCCGGGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHH---TTC
T ss_pred             CCeEEEEEEecCCCCCCeEEEEecccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHH---hCC
Confidence            34799999999875568999999999762                       1899999999999999998865   456


Q ss_pred             CCCCcEEEEeeCcccC-CCcchHHHHHHHHHhhhccEEEEEEecCcccC-C-cccc----cc------ChhHHHHHHHHH
Q 005347          380 KPRRTIVLCNWDAEEY-GLIGSTEWVEENREMLASRAVAYLNIDSAVHE-A-GFHA----SA------TPQLDELLKQAA  446 (701)
Q Consensus       380 ~p~rtI~F~~~~~EE~-Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~g-~-~~~~----~~------~p~l~~~~~~~~  446 (701)
                      +++++|.|++...||. |..|+..++++.. ....++.  +.+|..+.. . .+.+    .+      ++. ...+..+.
T Consensus       128 ~~~~~i~~~~~~dEE~gg~~g~~~~~~~~~-~~~~~~~--~~ld~g~~~p~~~~~i~~~~rG~~~~~v~~~-g~~~~~~~  203 (280)
T g1q7l.1         128 RFPRTIHMTFVPDEEVGGHQGMELFVQRPE-FHALRAG--FALDEGIANPTDAFTVFYSERSPWWVRVNPW-WAAFSRVC  203 (280)
T ss_dssp             CCSSCEEEEEESCGGGTSTTTHHHHTTSHH-HHTTCEE--EEEECCCCCSSSSEEEEECCSSCGGGCCCHH-HHHHHHHH
T ss_pred             CCCCceEEEEeCCcccCchhhHHHHHhCHH-hcCCCee--EEEECCccCCCCCceEEEeCCeEEEEEEEec-ccchhhhh
Confidence            8999999999999997 6789988776533 2223333  345543222 1 1111    11      111 11122222


Q ss_pred             HHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEEeeeCCCCC-cCCCCcccHHHHHhhCCCchHH
Q 005347          447 KQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVADMSFGTGYP-VYHSMYDDFIWMEKFGDPTFQR  525 (701)
Q Consensus       447 ~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~~~~~~~~~-~yHT~~Dt~~~i~~~~dp~~~~  525 (701)
                      ..+..      ++           ....+. +++|+.-+ ...|||++.|+.....+ ..|   |.-+.+.   -|+|-.
T Consensus       204 ~~~~~------~~-----------~~~i~p-~~tD~~~~-~~~GiPa~~fsp~~~~~~~lh---d~~~~i~---~~~fyd  258 (280)
T g1q7l.1         204 KDMNL------TL-----------EPEIMP-AAGDNRYI-RAVGVPALGFSPMNRTPVLLH---DHDERLH---EAVFLR  258 (280)
T ss_dssp             HHTTC------CE-----------EEEECC-SCSHHHHH-HHTTCCEEEECCCCSCCCCTT---STTCEEE---HHHHHH
T ss_pred             hhhhh------ce-----------eeeecc-CCCCccee-cccccccccCChhhhchhhhc---CCcCcCc---cccccc
Confidence            22110      00           011122 56677644 44799999876432222 233   3222221   233332


Q ss_pred             HHHHHHHHHHHHHHhcCCCCCCCC
Q 005347          526 HVAAASMWGLVALQLADEEFLPFN  549 (701)
Q Consensus       526 ~~~~a~~~~~l~~~La~~~~lP~d  549 (701)
                         -.++...++..||+-|.+|-+
T Consensus       259 ---~v~~~~~~i~~la~~p~l~~~  279 (280)
T g1q7l.1         259 ---GVDIYTRLLPALASVPALPSD  279 (280)
T ss_dssp             ---HHHHHHHHHHHHHTCCCCGGG
T ss_pred             ---ccHHHHHHHHHHhCCCCCCCC
Confidence               235777888999999999854


No 19 
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Probab=98.87  E-value=2.1e-09  Score=109.66  Aligned_cols=81  Identities=26%  Similarity=0.427  Sum_probs=70.3

Q ss_pred             eeeeeEEEEecCCCCCCcEEEEEeccCCcCC-CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccC-----
Q 005347          322 ATIQNVIGIIPGTEEPDRLVILGNHRDAWTF-GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEY-----  395 (701)
Q Consensus       322 ~~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~-----  395 (701)
                      ..+-||+|+++|.+. .+.|++|+|+|+++. |..|+..|+++.||++|.|.+   .+.+|+++|.++.|.+||.     
T Consensus        74 D~~GNv~g~~~G~~~-~~~v~~GSHlDTVp~GG~~DG~lGV~a~Levl~~l~e---~~~~~~~~i~vv~f~~EEg~rFg~  149 (322)
T d1r3na1          74 DKIGNMFAVYPGKNG-GKPTATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKD---NNYVPNYDVCVVVWFNEEGARFAR  149 (322)
T ss_dssp             BTTSCEEEEECCSSC-SSCEEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHH---TTCCCSSCEEEEECSCSSCSSBSS
T ss_pred             eCCCcEEEEecCCCC-CCceEecCccccCCcCCCcCCccchHHHHHHHHHHhh---hccCCCCCcEEEEeeccccccccc
Confidence            467899999999864 667999999999988 999999999999999998765   5789999999999999994     


Q ss_pred             CCcchHHHHHH
Q 005347          396 GLIGSTEWVEE  406 (701)
Q Consensus       396 Gl~GS~~~~~~  406 (701)
                      +++||..|.-.
T Consensus       150 ~~lGS~~~~G~  160 (322)
T d1r3na1         150 SCTGSSVWSHD  160 (322)
T ss_dssp             TTHHHHHHTTS
T ss_pred             cccccccccCC
Confidence            36789887643


No 20 
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.41  E-value=1.5e-07  Score=93.88  Aligned_cols=137  Identities=23%  Similarity=0.196  Sum_probs=87.6

Q ss_pred             CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecCccc------
Q 005347          353 GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDSAVH------  426 (701)
Q Consensus       353 GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~~g~------  426 (701)
                      .|.||.+|++++||++|.++       .++.++.|+|+..||.|+.||+...........-.+-..+..|+.+.      
T Consensus        16 ~alDdr~g~~~lle~l~~lk-------~~~~~l~~vft~qEEvG~rGA~~~a~~i~p~~~i~~d~~~a~D~~~~~~~~~~   88 (255)
T d1y0ya2          16 IAFDDRIAVYTILEVAKQLK-------DAKADVYFVATVQEEVGLRGARTSAFGIEPDYGFAIDVTIAADIPGTPEHKQV   88 (255)
T ss_dssp             TTHHHHHHHHHHHHHHHHCC-------SCSSEEEEEEESCCTTTSHHHHHHHHHHCCSEEEEEEEEECCCSTTCCGGGCC
T ss_pred             ccchhHHHHHHHHHHHHHhh-------ccCCcEEEEEEcccccCCCcchhhhhhhcccccceeeeeeccCCCCCcccccc
Confidence            67799999999999998763       46789999999999999999987554432211111111233343321      


Q ss_pred             -----CCccc-----cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHh-cCCceEEE
Q 005347          427 -----EAGFH-----ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQ-HIGVPVAD  495 (701)
Q Consensus       427 -----g~~~~-----~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~-~~GIPs~~  495 (701)
                           |+.+.     ...+|.+...+.+.+++..-|..       .        .+. .+ +|||-.++.. ..|||++.
T Consensus        89 ~~lg~G~~I~~~d~~~~~~~~l~~~l~~~a~~~~ip~Q-------~--------~~~-~~-gGtd~~~i~~~~~Gi~t~~  151 (255)
T d1y0ya2          89 THLGKGTAIKIMDRSVICHPTIVRWLEELAKKHEIPYQ-------L--------EIL-LG-GGTDAGAIHLTKAGVPTGA  151 (255)
T ss_dssp             CCTTSCEEEEEEETTEECCHHHHHHHHHHHHHTTCCEE-------E--------EEC-SS-CCCTHHHHTTSTTCCCEEE
T ss_pred             cccCCcceEEeccCCccCCHHHHHHHHHHHHHhCCCeE-------E--------ecc-cC-CCccHHHHHHhCCCCCEEE
Confidence                 22221     23467888888888887544421       0        011 12 5677666432 37999999


Q ss_pred             eeeCCCCCcCCCCcccHHHH
Q 005347          496 MSFGTGYPVYHSMYDDFIWM  515 (701)
Q Consensus       496 ~~~~~~~~~yHT~~Dt~~~i  515 (701)
                      ++.  +..++||+.++.+.-
T Consensus       152 igi--P~rymHS~~E~~~~~  169 (255)
T d1y0ya2         152 LSV--PARYIHSNTEVVDER  169 (255)
T ss_dssp             EEE--EEBSCSSSCEEEEHH
T ss_pred             ecc--ccccCcchhheeeHH
Confidence            986  345789999987654


No 21 
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}
Probab=98.24  E-value=8.5e-06  Score=81.74  Aligned_cols=90  Identities=18%  Similarity=0.195  Sum_probs=69.4

Q ss_pred             eeEEEEecCCCCCCcEEEEEeccCCcC----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCCCCC
Q 005347          325 QNVIGIIPGTEEPDRLVILGNHRDAWT----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGWKPR  382 (701)
Q Consensus       325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~~p~  382 (701)
                      .|++++.+... .++.|++.+|+|.++                      .|+.|+..|++++|++++.|.+   .+.+|+
T Consensus        67 ~~~~~~~~~g~-~~~~i~l~~H~DvVp~~~~W~~dPf~~~i~~dg~l~GrG~~D~k~~~~~~~~a~~~l~~---~~~~~~  142 (272)
T d1lfwa1          67 ANYAGRVNFGA-GDKRLGIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKE---AGFKPK  142 (272)
T ss_dssp             TTTEEEEEECC-CSSEEEEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHH---HTCCCS
T ss_pred             CceEEEEEcCC-CCCEEEEEeccceeeccCCceeccccccccccceeeecccccccccHHHHHHHHHHHHH---hCCCCC
Confidence            35555554322 257899999999763                      2999999999999999998765   456899


Q ss_pred             CcEEEEeeCcccCCCcchHHHHHHHHHhhhccEEEEEEecC
Q 005347          383 RTIVLCNWDAEEYGLIGSTEWVEENREMLASRAVAYLNIDS  423 (701)
Q Consensus       383 rtI~F~~~~~EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD~  423 (701)
                      ++|+|++...||.|..|+..|++++.     +....+..|.
T Consensus       143 ~~i~~~~~~~EE~g~~g~~~~~~~~~-----~~~~~~~~d~  178 (272)
T d1lfwa1         143 KKIDFVLGTNEETNWVGIDYYLKHEP-----TPDIVFSPDA  178 (272)
T ss_dssp             SEEEEEEESCTTTTCHHHHHHHHHSC-----CCSEEEESSE
T ss_pred             CCEEEEEEcccccCCccHHHHHHhCC-----CCCeEEeccc
Confidence            99999999999999999999988653     2233455554


No 22 
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}
Probab=97.41  E-value=0.00044  Score=68.25  Aligned_cols=93  Identities=17%  Similarity=0.100  Sum_probs=69.1

Q ss_pred             eeeeEEEEecCCCCCCcEEEEEeccCCcC-----------------------CCCCCCchHHHHHHHHHHHHHHhHHcCC
Q 005347          323 TIQNVIGIIPGTEEPDRLVILGNHRDAWT-----------------------FGAVDPNSGTAALLEVAQRLNKLQKRGW  379 (701)
Q Consensus       323 ~~~NVia~i~G~~~~~~~Ivl~aH~Ds~~-----------------------~GA~DnasG~A~lLElAr~l~~~~~~g~  379 (701)
                      ...||+++..+.   .+.|++.+|+|.++                       .|+.|+-+|+|++|.+++.+.+.   +.
T Consensus        47 ~~~nv~~~~~~~---~~~l~l~~H~DtVp~g~~~~w~~~p~~~~~~dg~iyGrGa~D~Kg~~a~~l~a~~~l~~~---~~  120 (262)
T d1vgya1          47 NTKNIWLRRGTK---APVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAK---HP  120 (262)
T ss_dssp             TBCEEEEEECSS---SSEEEEEEECCBCCCCCGGGSSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHH---CT
T ss_pred             CccEEEEEecCC---CCeEEEEeccccccCCccccccccccccEEEcCceEeeccccccccHHHHHHHHHHHHHh---cc
Confidence            456999987653   46799999999963                       29999999999999999988764   34


Q ss_pred             CCCCcEEEEeeCc-ccCCCcchHHHHHHHHHhhhccEEEEEEec
Q 005347          380 KPRRTIVLCNWDA-EEYGLIGSTEWVEENREMLASRAVAYLNID  422 (701)
Q Consensus       380 ~p~rtI~F~~~~~-EE~Gl~GS~~~~~~~~~~l~~~~va~iNlD  422 (701)
                      ++++++.|++... ||.|..|+...++.... ...+..+.|..+
T Consensus       121 ~~~~~~~l~~~~dEE~~~~~G~~~l~~~~~~-~~~~~~~~ivgE  163 (262)
T d1vgya1         121 NHQGSIALLITSDEEGDALDGTTKVVDVLKA-RDELIDYCIVGE  163 (262)
T ss_dssp             TCSSEEEEEEESCSSSCCTTSHHHHHHHHHH-TTCCEEEEEECC
T ss_pred             cCCCCeEEEEEecCccccccCHHHHHhHhhh-cCCCcccccccC
Confidence            6789999998876 55778899876665432 234455555433


No 23 
>d1tkja1 c.56.5.4 (A:1-277) Aminopeptidase {Streptomyces griseus [TaxId: 1911]}
Probab=96.44  E-value=0.0017  Score=64.54  Aligned_cols=50  Identities=12%  Similarity=0.220  Sum_probs=45.1

Q ss_pred             CCChhHHHHHHHHhhc------CCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeE
Q 005347           38 LSDNVSISHHLHTLTR------RPHVAGSEANAEAAAYVLSVFTSCSLESHIASYG   87 (701)
Q Consensus        38 ~i~~~~i~~~l~~ls~------~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~   87 (701)
                      .|+.+++++||..|++      .+|.+||+|..++++||.++|+++|++++.++|.
T Consensus         3 ~i~~~~~~~~l~~l~~~~~~~~g~R~~gs~~~~~a~~yi~~~l~~~G~~~~~~~~~   58 (277)
T d1tkja1           3 DIPLANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFT   58 (277)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeee
Confidence            5889999999999874      4799999999999999999999999999887765


No 24 
>d3bi1a3 c.56.5.5 (A:57-117,A:351-593) Glutamate carboxypeptidase II FOLH1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.38  E-value=0.0024  Score=64.27  Aligned_cols=56  Identities=29%  Similarity=0.423  Sum_probs=48.7

Q ss_pred             HHhhccCCCChhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCce-eeeeeEE
Q 005347           31 SLYTSTSLSDNVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLES-HIASYGV   88 (701)
Q Consensus        31 ~~~~~~~~i~~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~-~~~~y~v   88 (701)
                      +.+++  .+++++++++|+.|++.||.+||+++.++++||.++|+++|+++ ....+.+
T Consensus         3 ~~~~~--e~~~~~~~~~l~~~~~~p~~~gs~~~~~~~~~i~~~~~~~g~~~~~~~~~~~   59 (304)
T d3bi1a3           3 KAFLD--ELKAENIKKFLYNFTQIPHLAGTEQNFQLAKQIQSQWKEFGLDSVELAHYDV   59 (304)
T ss_dssp             HHHHH--HCCHHHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEEEEEEE
T ss_pred             hHHHH--HhCHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHhCCcceeeeeeec
Confidence            34667  79999999999999999999999999999999999999999986 4444443


No 25 
>d1ysja1 c.56.5.4 (A:4-177,A:293-379) Protein YxeP {Bacillus subtilis [TaxId: 1423]}
Probab=96.26  E-value=0.061  Score=52.26  Aligned_cols=77  Identities=25%  Similarity=0.277  Sum_probs=59.3

Q ss_pred             eeEEEEecCCCCCCcEEEEEeccCCcCC----------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEEE
Q 005347          325 QNVIGIIPGTEEPDRLVILGNHRDAWTF----------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVLC  388 (701)
Q Consensus       325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~~----------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F~  388 (701)
                      ..|+|.++|.. +.+.|.+-+|+|+.+.                .|..-..-++++|.+|+.+.+.+.   +.+-+|+|+
T Consensus        50 tgv~a~~~g~~-~gp~Ialrad~DALp~~e~~~~~~~s~~~G~~HaCGHd~h~a~~lgaA~~l~~~~~---~~~G~v~li  125 (261)
T d1ysja1          50 TGVIAEIKGRE-DGPVIAIRADIDALPIQEQTNLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRA---ELKGTVRFI  125 (261)
T ss_dssp             SCEEEEEECSS-CCCEEEEEEECCCBSCCCCCCCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGG---GCSSEEEEE
T ss_pred             eEEEEEECCCC-cCceEEEEecccccchhhhccCccccccCCceeccCcchHHHHHHHHHHHHHHhcc---cCCCeEEEe
Confidence            46999998865 4789999999999751                233333467888999999887543   466899999


Q ss_pred             eeCcccCCCcchHHHHHH
Q 005347          389 NWDAEEYGLIGSTEWVEE  406 (701)
Q Consensus       389 ~~~~EE~Gl~GS~~~~~~  406 (701)
                      +-.|||.+ .|+...+++
T Consensus       126 fqPaEE~~-~Ga~~mi~~  142 (261)
T d1ysja1         126 FQPAEEIA-AGARKVLEA  142 (261)
T ss_dssp             EESCTTTT-CHHHHHHHT
T ss_pred             cccCcccc-cchHHHHHc
Confidence            99999976 688887776


No 26 
>d1rtqa_ c.56.5.4 (A:) Aminopeptidase {Aeromonas proteolytica [TaxId: 671]}
Probab=96.19  E-value=0.003  Score=63.16  Aligned_cols=57  Identities=16%  Similarity=0.128  Sum_probs=48.5

Q ss_pred             hHHHHhhccCCCChhHHHHHHHHhhcC-CCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347           28 FYHSLYTSTSLSDNVSISHHLHTLTRR-PHVAGSEANAEAAAYVLSVFTSCSLESHIASY   86 (701)
Q Consensus        28 ~~~~~~~~~~~i~~~~i~~~l~~ls~~-~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y   86 (701)
                      .....++.  .+++++|+++|+.|++. .|.+||+++.++++||.++|+++|+++....+
T Consensus         8 ~~i~~~~~--~v~~~~i~~~l~~L~sf~~R~~~s~~~~~a~~wi~~~~~~~g~~~~~~~~   65 (291)
T d1rtqa_           8 ATVTAWLP--QVDASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASV   65 (291)
T ss_dssp             HHHHHHGG--GCCHHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEE
T ss_pred             HHHHHHHH--hcCHHHHHHHHHHHhCcCCCCCCChhHHHHHHHHHHHHHHhcCccCCceE
Confidence            33455677  79999999999999996 69999999999999999999999998644333


No 27 
>d1de4c3 c.56.5.5 (C:122-189,C:383-608) Transferrin receptor ectodomain, protease-like domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.79  E-value=0.0046  Score=61.84  Aligned_cols=54  Identities=20%  Similarity=0.282  Sum_probs=47.0

Q ss_pred             hhHHHHhhccCCCChhHHHHHHHHhhcC---CCCCCCHhhHHHHHHHHHHHHHCCCcee
Q 005347           27 SFYHSLYTSTSLSDNVSISHHLHTLTRR---PHVAGSEANAEAAAYVLSVFTSCSLESH   82 (701)
Q Consensus        27 ~~~~~~~~~~~~i~~~~i~~~l~~ls~~---~r~aGs~g~~~~a~yi~~~~~~~Gl~~~   82 (701)
                      .++.+.+-+  .++..++.+++++|++.   ||.+||+|+.++++||.++|++.|+++.
T Consensus         4 ~~~~~~~~~--~i~~~~~~~~i~~l~~~~~~~R~~gs~~~~~~~~~i~~~~~~~g~~~~   60 (294)
T d1de4c3           4 DDLKRKLSE--KLDSTDFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLSKV   60 (294)
T ss_dssp             HHHHHHHHH--HHHTCCHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHTTCSEE
T ss_pred             hHHHHHHHH--hcChHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHHHHHHHcCCCcc
Confidence            355666666  68889999999999984   7999999999999999999999999853


No 28 
>d1xmba1 c.56.5.4 (A:37-215,A:335-428) IAA-amino acid hydrolase, catalytic domain {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=95.11  E-value=0.15  Score=49.65  Aligned_cols=76  Identities=30%  Similarity=0.280  Sum_probs=57.0

Q ss_pred             eeEEEEecCCCCCCcEEEEEeccCCcCC-------------CC----CCCchHHHHHHHHHHHHHHhHHcCCCCCCcEEE
Q 005347          325 QNVIGIIPGTEEPDRLVILGNHRDAWTF-------------GA----VDPNSGTAALLEVAQRLNKLQKRGWKPRRTIVL  387 (701)
Q Consensus       325 ~NVia~i~G~~~~~~~Ivl~aH~Ds~~~-------------GA----~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~F  387 (701)
                      ..|+|.+.+..  .+.|.+-+++|+.+.             |.    .-| .-+|++|.+|+.|.+..+   +.+-+|+|
T Consensus        57 tg~~a~~~~~~--~~~i~~rad~Dalp~~e~~~~~~~s~~~g~~HaCGHd-~h~a~~l~aa~~l~~~~~---~~~g~v~~  130 (273)
T d1xmba1          57 TGVIGYIGTGE--PPFVALRADMDALPIQEGVEWEHKSKIAGKMHACGHD-GHVTMLLGAAKILHEHRH---HLQGTVVL  130 (273)
T ss_dssp             TEEEEEEESSS--SCEEEEEEECCCBSCCCCCCSTTCCSSTTCBCCSSHH-HHHHHHHHHHHHHHHTGG---GCSSEEEE
T ss_pred             eEEEEEECCCc--ceEEEEeccccccccccccCcccccCCCCcccccccc-hHHHHHHHHHHHHHHhhh---cCCCeEEE
Confidence            56899995432  478999999999852             11    111 447889999999988653   45789999


Q ss_pred             EeeCcccCCCcchHHHHHHH
Q 005347          388 CNWDAEEYGLIGSTEWVEEN  407 (701)
Q Consensus       388 ~~~~~EE~Gl~GS~~~~~~~  407 (701)
                      ++-.|||.+ -|+...+++-
T Consensus       131 ifqPaEE~~-~Ga~~mi~~G  149 (273)
T d1xmba1         131 IFQPAEEGL-SGAKKMREEG  149 (273)
T ss_dssp             EEECCTTTT-CHHHHHHHTT
T ss_pred             EEecccccc-cchhHHHHcC
Confidence            999999965 5888888763


No 29 
>d1y7ea2 c.56.5.4 (A:4-100,A:234-458) Probable aminopeptidase ApeA {Borrelia burgdorferi [TaxId: 139]}
Probab=93.80  E-value=0.0034  Score=63.26  Aligned_cols=169  Identities=19%  Similarity=0.126  Sum_probs=90.5

Q ss_pred             eeEEEEecCCCCC-CcEEEEEeccCCcCC-----------------CCCCCchHHHHHHHHHHHHHHhHHcCCCCCCcEE
Q 005347          325 QNVIGIIPGTEEP-DRLVILGNHRDAWTF-----------------GAVDPNSGTAALLEVAQRLNKLQKRGWKPRRTIV  386 (701)
Q Consensus       325 ~NVia~i~G~~~~-~~~Ivl~aH~Ds~~~-----------------GA~DnasG~A~lLElAr~l~~~~~~g~~p~rtI~  386 (701)
                      ..++|-.-|...+ +.+-|+|||.||...                 +..||-.++-+.|+...      +..-.|..+.+
T Consensus        70 ~sliaf~iG~~~~~~G~~iigaHtDSPr~~a~~~~~~G~d~efi~s~rlDd~~~~~~~l~Ali------~~~~~~~~~~v  143 (322)
T d1y7ea2          70 KSVAFAIIGKNPIEDGMNFIVSHTDSPRVPAGTAKDVGFDKALIGAYGQDDKICVFTSLESIF------DLEETPNKTAI  143 (322)
T ss_dssp             SCBCCEECCSSCGGGCCEECCCBCCCCBEECSCCEEETTTTCEEEESSHHHHHHHHHHHHHHS------SSSCCCSSCEE
T ss_pred             CEEEEEEeCCCCccCCeEEEEEecCCCchhhccccccccccceeeccCCccHHHHHHHHHHHH------hhhcCCCceEE
Confidence            3466666676532 357789999999731                 66788888887776432      11225778888


Q ss_pred             EEeeCcccCCCcchHH----HHHHHHHhh-----------------hccEEEEEEecCcc-------------------c
Q 005347          387 LCNWDAEEYGLIGSTE----WVEENREML-----------------ASRAVAYLNIDSAV-------------------H  426 (701)
Q Consensus       387 F~~~~~EE~Gl~GS~~----~~~~~~~~l-----------------~~~~va~iNlD~~g-------------------~  426 (701)
                      +++|+-||.|..|++-    |+++....+                 ..+ -..|..|++-                   .
T Consensus       144 ~~~~D~EEIGS~s~~GA~s~~l~~~l~ri~~~l~~~~~~~~~~~~al~~-S~~iSaDvahA~hPny~~~~d~~~~~~lg~  222 (322)
T d1y7ea2         144 CFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLHVQKALWN-SKSISADVCAAINPLFSSVHDEQNAPQLGY  222 (322)
T ss_dssp             CCCBCSTTC--------CTTHHHHHHHHHHHHHSSTTCCTHHHHHHHHH-CEEEECCCEECCCC-------CTTSCCTTS
T ss_pred             EEEecccccCCCccccccCccHHHHHHHHHHHhcCCCccchhHHHHHhh-ceeeeccccccccCCCccccccccccccCC
Confidence            9999999999776542    332211111                 011 2357788752                   1


Q ss_pred             CCcc-c----------cccChhHHHHHHHHHHHcCCCCCCcchhhhccccCCCCCccccCCCCCCchHhHHhcCCceEEE
Q 005347          427 EAGF-H----------ASATPQLDELLKQAAKQVQDPDNSSQTIYDSWTGSSNSPVIGRLGGGGSDYAAFIQHIGVPVAD  495 (701)
Q Consensus       427 g~~~-~----------~~~~p~l~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~SD~~~F~~~~GIPs~~  495 (701)
                      |..+ .          ..+.+.+...+.+.++.-.-|..   ...   .     .+.+..  +||.-.|++...|||+++
T Consensus       223 G~~i~k~~~~~~~~~~~~a~~~~~~~~~~ia~~~~Ip~Q---~~~---v-----~r~d~~--gGsTig~i~a~~Gi~tvd  289 (322)
T d1y7ea2         223 GIPIMKYTGHGGKSMASDADAELVSYIRQLLNKNNIAWQ---VAT---L-----GKVEEG--GGGTVAKFLAGYGIRTID  289 (322)
T ss_dssp             CEEEEEEC-----------CHHHHHHHHHHHHHHTCCEE---EEE---E-----CC-------CHHHHHHHHHHTCEEEE
T ss_pred             CceEEEecCCCccccccccchHHHHHHHHHHHhcCCCee---EEE---e-----ccCCCC--CcchHHHHHhcCCCCEEE
Confidence            2111 0          01235566667777665433321   000   0     011122  455566777768999999


Q ss_pred             eeeCCCCCcCCCCcccHHHH
Q 005347          496 MSFGTGYPVYHSMYDDFIWM  515 (701)
Q Consensus       496 ~~~~~~~~~yHT~~Dt~~~i  515 (701)
                      ++-  +--.-||+..+...-
T Consensus       290 iGi--P~l~MHS~rE~~~~~  307 (322)
T d1y7ea2         290 MGP--AVISMHSPMEITSKF  307 (322)
T ss_dssp             ECC--EEBSTTSSSEEEEHH
T ss_pred             cCH--HHhhhhHHHHHhchh
Confidence            863  222569998876543


No 30 
>d2afwa1 c.56.5.8 (A:33-361) Glutaminyl-peptide cyclotransferase, QPCT {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.16  E-value=0.07  Score=53.57  Aligned_cols=61  Identities=10%  Similarity=0.006  Sum_probs=42.6

Q ss_pred             HHHhhccCCCChhHHHH-HHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeeeEEEEeec
Q 005347           30 HSLYTSTSLSDNVSISH-HLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASYGVSLTYP   93 (701)
Q Consensus        30 ~~~~~~~~~i~~~~i~~-~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y~v~~~~p   93 (701)
                      .+.+.+  .++.+++.+ +|..+ -.||.+||+|..++++||.++|+++|+++..+.+......|
T Consensus        21 ~~~~~~--~~~~~~~~~~~l~~~-l~pR~~Gs~g~~~a~~~i~~~~~~~g~~~~~~~~~f~~~~~   82 (329)
T d2afwa1          21 LRQIAE--GTSISEMWQNDLQPL-LIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTP   82 (329)
T ss_dssp             HHHHHH--HCCHHHHHHHTTGGG-CSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCT
T ss_pred             HHHHHh--ccCHHHHHHHhhhHh-hCCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEEEEeccc
Confidence            334445  566666543 23322 14899999999999999999999999987666655444444


No 31 
>d1z2la1 c.56.5.4 (A:4-212,A:330-413) Allantoate amidohydrolase AllC catalytic domain {Escherichia coli [TaxId: 562]}
Probab=89.17  E-value=0.23  Score=48.82  Aligned_cols=53  Identities=13%  Similarity=0.041  Sum_probs=41.6

Q ss_pred             hhHHHHHHHHhhcC--------CCCCCCHhhHHHHHHHHHHHHHCCCceeeeee-EEEEeec
Q 005347           41 NVSISHHLHTLTRR--------PHVAGSEANAEAAAYVLSVFTSCSLESHIASY-GVSLTYP   93 (701)
Q Consensus        41 ~~~i~~~l~~ls~~--------~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y-~v~~~~p   93 (701)
                      .++|++.|++|+..        .|.+.|+++.++.+|+.++++++|++++.+.. .++-.+|
T Consensus         5 ~~~l~~~l~~l~~~g~~~~gGvtR~~~s~~~~~a~~~l~~~~~~~Gl~v~~D~~GNvig~~~   66 (293)
T d1z2la1           5 RQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDEVGNLYGRLN   66 (293)
T ss_dssp             HHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeeeccCCHHHHHHHHHHHHHHHHcCCEEEEecCCcEEEEEe
Confidence            46788888887753        39999999999999999999999999887654 3333333


No 32 
>g1q7l.1 c.56.5.4 (A:,B:) Aminoacylase-1, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=77.30  E-value=8.6  Score=36.66  Aligned_cols=42  Identities=12%  Similarity=0.037  Sum_probs=31.4

Q ss_pred             HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347           43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA   84 (701)
Q Consensus        43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~   84 (701)
                      ..-+.|+.|-+.|=...+++..++++|+.++|++.|++++..
T Consensus         5 ~~v~~l~ellrIpSvsp~~~~~~~~~~l~~~l~~~G~~~~~~   46 (280)
T g1q7l.1           5 PSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKV   46 (280)
T ss_dssp             HHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEE
T ss_pred             HHHHHHHHHhCCCCCCcCcCHHHHHHHHHHHHHHCCCeEEEE
Confidence            355667777777644444557789999999999999987543


No 33 
>d1vgya1 c.56.5.4 (A:2-180,A:294-376) Succinyl-diaminopimelate desuccinylase, catalytic domain {Neisseria meningitidis [TaxId: 487]}
Probab=75.66  E-value=6.9  Score=36.63  Aligned_cols=42  Identities=7%  Similarity=0.097  Sum_probs=31.4

Q ss_pred             hHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347           42 VSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIAS   85 (701)
Q Consensus        42 ~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~   85 (701)
                      +++-+.++.|-+.+  +-|+.++++|+||+++|++.|++++..+
T Consensus         3 ~e~lell~~Lv~i~--S~s~~e~~~a~~l~~~l~~~G~~~~~~~   44 (262)
T d1vgya1           3 TQSLELAKELISRP--SVTPDDRDCQKLMAERLHKIGFAAEEMH   44 (262)
T ss_dssp             SHHHHHHHHHHTSC--CBTTCCTTHHHHHHHHHHTTTCEEEECC
T ss_pred             HHHHHHHHHHhCCC--CCCCCHHHHHHHHHHHHHHCCCeEEEEE
Confidence            45556778887765  3344567899999999999999886543


No 34 
>d1r3na1 c.56.5.4 (A:18-247,A:364-455) Peptidase-like beta-alanine synthase, catalytic domain {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}
Probab=70.58  E-value=1.8  Score=42.47  Aligned_cols=48  Identities=6%  Similarity=0.093  Sum_probs=39.3

Q ss_pred             CCChhHHHHHHHH----hhc------------CCCCCCCHhhHHHHHHHHHHHHHCCCceeeee
Q 005347           38 LSDNVSISHHLHT----LTR------------RPHVAGSEANAEAAAYVLSVFTSCSLESHIAS   85 (701)
Q Consensus        38 ~i~~~~i~~~l~~----ls~------------~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~   85 (701)
                      .|+.+|+++.|..    |..            ..|++-|+.+.++.+|+.++++++||+++.+.
T Consensus        12 ~in~~RL~~~l~e~~~~~g~~~~~g~~~~~~G~tRla~S~~d~~ar~~l~~~~~~~Gl~v~~D~   75 (322)
T d1r3na1          12 SIASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDK   75 (322)
T ss_dssp             CCCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHHTCEEEEBT
T ss_pred             CcCHHHHHHHHHHHHHhhccccccCCCCCCCCeecccCCHHHHHHHHHHHHHHHHcCCEEEEeC
Confidence            4888999877633    322            14999999999999999999999999988765


No 35 
>d1vhea2 c.56.5.4 (A:3-72,A:163-367) Hypothetical protein YsdC, catalytic domain {Bacillus subtilis [TaxId: 1423]}
Probab=58.58  E-value=3.9  Score=38.64  Aligned_cols=49  Identities=16%  Similarity=0.114  Sum_probs=39.4

Q ss_pred             HHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee-EEEEeec
Q 005347           43 SISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY-GVSLTYP   93 (701)
Q Consensus        43 ~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y-~v~~~~p   93 (701)
                      +..+.|+.|.+.|..+|.+  .++++||++.|+++|++++.+.+ .++...|
T Consensus         4 ~~~~~l~~l~~i~s~sg~E--~~v~~~l~~~l~~~g~~~~~D~~gN~i~~~~   53 (275)
T d1vhea2           4 ETLTMLKDLTDAKGIPGNE--REVRQVMKSYIEPFADEVTTDRLGSLIAKKT   53 (275)
T ss_dssp             HHHHHHHHHHHSCCCTTCC--HHHHHHHHHHHGGGCSEEEECTTCCEEEEEE
T ss_pred             HHHHHHHHHHcCCCCCCCH--HHHHHHHHHHHHHcCCEEEEeCCCcEEEEec
Confidence            4668899999999999984  68999999999999999877765 3444333


No 36 
>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase YhfE {Bacillus cereus [TaxId: 1396]}
Probab=58.05  E-value=3.4  Score=38.51  Aligned_cols=42  Identities=12%  Similarity=0.226  Sum_probs=35.8

Q ss_pred             hhHHHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeee
Q 005347           41 NVSISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIA   84 (701)
Q Consensus        41 ~~~i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~   84 (701)
                      .+++.+.|+.|.+.|..+|-  +.++++||+++|+++|++++.+
T Consensus         3 ~~e~le~lk~L~~ips~Sg~--e~~~~~~i~~~l~~~G~~~~~d   44 (233)
T d2grea2           3 TKETMELIKELVSIPSPSGN--TAKIINFIENYVSEWNVETKRN   44 (233)
T ss_dssp             HHHHHHHHHHHHTSCCBTTC--CHHHHHHHHHHTTTSSSEEEEC
T ss_pred             HHHHHHHHHHHHcCCCCCCC--HHHHHHHHHHHHHHcCCeEEEe
Confidence            46788899999999988886  5689999999999999987543


No 37 
>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049 {Thermotoga maritima [TaxId: 2336]}
Probab=50.58  E-value=3.3  Score=38.49  Aligned_cols=45  Identities=16%  Similarity=0.133  Sum_probs=35.1

Q ss_pred             HHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee-EEEEeec
Q 005347           47 HLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY-GVSLTYP   93 (701)
Q Consensus        47 ~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y-~v~~~~p   93 (701)
                      +|+.|++.|..+|.+  .+.++||++.|+++|++++.+++ .++...|
T Consensus         2 ~l~~l~~i~s~sg~E--~~v~~~~~~~l~~~g~~v~~d~~gNii~~~~   47 (255)
T d2fvga2           2 YLKELSMMPGVSGDE--GKVRDFIKSKIEGLVDNLYTDVLGNLIALKR   47 (255)
T ss_dssp             CHHHHHHSCCBTTCC--HHHHHHHHHHHGGGSSEEEECTTSCEEEEEC
T ss_pred             hHHHHhcCCCCCCCH--HHHHHHHHHHHHHcCCeEEEeCCCCEEEEec
Confidence            378899999999984  57889999999999999877654 3444444


No 38 
>d1cg2a1 c.56.5.4 (A:26-213,A:327-414) Carboxypeptidase G2, catalytic domain {Pseudomonas sp., strain rs-16 [TaxId: 306]}
Probab=46.81  E-value=13  Score=35.15  Aligned_cols=44  Identities=11%  Similarity=0.165  Sum_probs=35.5

Q ss_pred             hhHHHHHHHHhhcCCCCCCCHhh-HHHHHHHHHHHHHCCCceeee
Q 005347           41 NVSISHHLHTLTRRPHVAGSEAN-AEAAAYVLSVFTSCSLESHIA   84 (701)
Q Consensus        41 ~~~i~~~l~~ls~~~r~aGs~g~-~~~a~yi~~~~~~~Gl~~~~~   84 (701)
                      .+.+.+.|+.|.+.+-.++.+.+ .+.++|++++|++.|++++..
T Consensus        15 ~~~~i~~L~~lv~i~S~s~~~~~~~~~a~~l~~~l~~lG~~~~~~   59 (276)
T d1cg2a1          15 QPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRS   59 (276)
T ss_dssp             HHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHCCCeEEEE
Confidence            45677889999998877777654 578999999999999987543


No 39 
>d1fnoa4 c.56.5.4 (A:1-207,A:321-408) Peptidase T (tripeptidase), catalytic domain {Salmonella typhimurium [TaxId: 90371]}
Probab=39.56  E-value=11  Score=35.24  Aligned_cols=26  Identities=12%  Similarity=0.120  Sum_probs=23.5

Q ss_pred             CCCCCHhhHHHHHHHHHHHHHCCCce
Q 005347           56 HVAGSEANAEAAAYVLSVFTSCSLES   81 (701)
Q Consensus        56 r~aGs~g~~~~a~yi~~~~~~~Gl~~   81 (701)
                      +.+.+++..++++||+++|++.|+++
T Consensus        24 ~~p~~~~e~~~a~~l~~~l~~lG~~~   49 (295)
T d1fnoa4          24 QVPSTEGQWKLLRLLKQQLEEMGLVN   49 (295)
T ss_dssp             SSSSSHHHHHHHHHHHHHHHHHTCEE
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence            56678899999999999999999985


No 40 
>d1j3la_ c.8.7.1 (A:) Demethylmenaquinone methyltransferase {Thermus thermophilus [TaxId: 274]}
Probab=36.12  E-value=48  Score=28.48  Aligned_cols=66  Identities=21%  Similarity=0.423  Sum_probs=44.7

Q ss_pred             cccccCCCcceEeeEEEecCCChhchHHHHh-cCCcccceEEEEEeCC-----CchhhHHHHHHHcCCeEEEEE
Q 005347          133 TFHGYAKSGTVIGPVVYVNYGRVEDYVTLKE-MVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIF  200 (701)
Q Consensus       133 ~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~-~gv~v~GkIvlv~~g~-----~~~~~k~~~A~~~GA~gvi~~  200 (701)
                      .|..|++...+.|+++=|.  +.+|-..+.+ ....-+|+|+++..+.     ++-+.....|.++|++|+|+-
T Consensus        21 ~~~~~g~~~~~~G~a~Tv~--~~~Dn~~v~~~l~~~~~G~VlVid~~g~~~~A~~Gd~~a~~a~~~G~~G~Vid   92 (164)
T d1j3la_          21 VFKSFGGRARFAGRVRTLR--VFEDNALVRKVLEEEGAGQVLFVDGGGSLRTALLGGNLARRAWEKGWAGVVVH   92 (164)
T ss_dssp             CSEECSSBSSEEEEEEEEE--CSSBCHHHHHHHTSCCBTEEEEEECTTCCSSBSCCHHHHHHHHHTTBCEEEEE
T ss_pred             hhhccCCCceEEeeeEEEE--EcCCcHHHHHHHHhCCCCCEEEEECCCCchhhhhhHHHHHHHHHhCCCEEeCc
Confidence            3456776667788887664  2455333332 3456789999998654     233457799999999999975


No 41 
>d1vi4a_ c.8.7.1 (A:) Hypothetical protein VC2366 {Vibrio cholerae [TaxId: 666]}
Probab=34.09  E-value=47  Score=28.49  Aligned_cols=67  Identities=15%  Similarity=0.283  Sum_probs=44.4

Q ss_pred             cccccCCCcceEeeEEEecCCChhchHHHH-hcCCcccceEEEEEeCC-----CchhhHHHHHHHcCCeEEEEEe
Q 005347          133 TFHGYAKSGTVIGPVVYVNYGRVEDYVTLK-EMVVNVTGTVVLARYGQ-----IFRGDIVHNAFEAGAAGALIFT  201 (701)
Q Consensus       133 ~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~-~~gv~v~GkIvlv~~g~-----~~~~~k~~~A~~~GA~gvi~~~  201 (701)
                      .+..|++.-.+-|+.+=|.-  .+|...+. .....-+|+|+++..++     ++-+.....|+++|++|+|+..
T Consensus        22 ~~~~~g~~~~~~G~a~Tv~~--~~d~~~~~~~i~~~~~G~VlVid~~g~~~~a~~G~~~a~~a~~~G~~G~VidG   94 (162)
T d1vi4a_          22 PLQNFGQRSAFWGEIVTVRC--YHDNSKVRDVLSQNGKGKVLVVDGHGSCHKALMGDQLAILAIKNDWEGVIIYG   94 (162)
T ss_dssp             CCEECSSCSCEEEEEEEEEC--SSCCHHHHHHHTSCCTTEEEEEECTTCCSSEEECHHHHHHHHHTTCCEEEEEE
T ss_pred             hhhCCCCCCEEEEEEEEEEE--cCchHHHHHHHhcCCCCCEEEEECCCCccceehHHHHHHHHHHhCCCEEeccc
Confidence            35567766677788776642  34533222 12345699999999654     2224578999999999999864


No 42 
>d1lfwa1 c.56.5.4 (A:1-186,A:383-468) Aminopeptidase PepV {Lactobacillus delbrueckii [TaxId: 1584]}
Probab=33.73  E-value=1.5e+02  Score=26.85  Aligned_cols=45  Identities=13%  Similarity=0.074  Sum_probs=34.5

Q ss_pred             ChhHHHHHHHHhhcCCCCCCC----------HhhHHHHHHHHHHHHHCCCceeee
Q 005347           40 DNVSISHHLHTLTRRPHVAGS----------EANAEAAAYVLSVFTSCSLESHIA   84 (701)
Q Consensus        40 ~~~~i~~~l~~ls~~~r~aGs----------~g~~~~a~yi~~~~~~~Gl~~~~~   84 (701)
                      ..+++.+.|+.|.+.|-.++.          ++..++++++.+.+++.|++++..
T Consensus        12 ~~d~~l~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~   66 (272)
T d1lfwa1          12 KKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF   66 (272)
T ss_dssp             THHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred             HHHHHHHHHHHHhCCCCcCCCcccccccccchHHHHHHHHHHHHHHHcCCeeeee
Confidence            567788889998887644433          445788999999999999987543


No 43 
>d1q5xa_ c.8.7.1 (A:) Regulator of RNase E activity RraA (MenG) {Escherichia coli [TaxId: 562]}
Probab=33.60  E-value=50  Score=28.23  Aligned_cols=66  Identities=20%  Similarity=0.311  Sum_probs=43.5

Q ss_pred             cccccCCCcceEeeEEEecCCChhchHHHHh-cCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEE
Q 005347          133 TFHGYAKSGTVIGPVVYVNYGRVEDYVTLKE-MVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIF  200 (701)
Q Consensus       133 ~~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~-~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~  200 (701)
                      .|..|+....+.|+.+=+..  .+|...+.+ ....-+|+|+++..++.     +-+.....|+.+|+.|+|+-
T Consensus        21 ~~~~~g~~~~~~G~a~Tv~~--~~d~~~~~~al~~~~~G~VlVid~~g~~~~A~~G~~~a~~a~~~G~~G~Vid   92 (160)
T d1q5xa_          21 LFSNFGGRASFGGQIITVKC--FEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIY   92 (160)
T ss_dssp             CCEECSSCSSEEEEEEEEEC--SSBCHHHHHHHTSCCTTEEEEEECTTCSSSEEECHHHHHHHHHTTCCEEEEE
T ss_pred             hhhccCCCCEEEEEEEEEEE--eCcHHHHHHHHhccCCCcEEEEECCCCccccchHHHHHHHHHHcCcCEEeCc
Confidence            34556666667777766532  345443332 34567899999985442     22457899999999999975


No 44 
>d1vhoa2 c.56.5.4 (A:3-69,A:153-333) Putative endoglucanase TM1048, catalytic domain {Thermotoga maritima [TaxId: 2336]}
Probab=30.12  E-value=22  Score=32.53  Aligned_cols=41  Identities=20%  Similarity=0.212  Sum_probs=33.2

Q ss_pred             HHHHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347           44 ISHHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY   86 (701)
Q Consensus        44 i~~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y   86 (701)
                      .++.|+.|++.|..+|-+  .+.++||.+.|++++.+++.+.+
T Consensus         3 ~~~~l~~l~~~~~~sg~E--~~v~~~i~~~l~~~~~~~~~d~~   43 (248)
T d1vhoa2           3 TGKLLMELSNLDGPSGYE--TNVVSYIKSVIEPFVDEAKTTRH   43 (248)
T ss_dssp             HHHHHHHHHHSCCBTTCC--HHHHHHHHHHHGGGCSEEEECTT
T ss_pred             HHHHHHHHhcCCCCCCCH--HHHHHHHHHHHHHcCCEEEEecC
Confidence            345688899888888874  57889999999999998877654


No 45 
>d1y0ya2 c.56.5.4 (A:164-351,A:6-72) Frv operon protein FrvX, catalytic domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=24.95  E-value=7.2  Score=36.71  Aligned_cols=28  Identities=25%  Similarity=0.341  Sum_probs=0.0

Q ss_pred             eeeeeeeeEEEEecCCCCCCcEEEEEeccCC
Q 005347          319 YVMATIQNVIGIIPGTEEPDRLVILGNHRDA  349 (701)
Q Consensus       319 ~~~~~~~NVia~i~G~~~~~~~Ivl~aH~Ds  349 (701)
                      .......||||+++|.   .+.||+.||+|-
T Consensus       227 ~~~D~~Gn~~~~~~~~---~~~i~~~aH~De  254 (255)
T d1y0ya2         227 VKVDKLGNVIAHKKGE---GPKVMIAAHMDQ  254 (255)
T ss_dssp             -------------------------------
T ss_pred             EEECCCCCEEEEEcCC---CCEEEEEecccc
Confidence            4567889999999885   347999999995


No 46 
>d1nxja_ c.8.7.1 (A:) Hypothetical protein Rv3853 {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.73  E-value=73  Score=26.98  Aligned_cols=66  Identities=20%  Similarity=0.280  Sum_probs=42.8

Q ss_pred             ccccCCCcceEeeEEEecCCChhchHHHHh-cCCcccceEEEEEeCCC-----chhhHHHHHHHcCCeEEEEEe
Q 005347          134 FHGYAKSGTVIGPVVYVNYGRVEDYVTLKE-MVVNVTGTVVLARYGQI-----FRGDIVHNAFEAGAAGALIFT  201 (701)
Q Consensus       134 ~~a~S~~G~v~g~lVyv~~G~~~D~~~L~~-~gv~v~GkIvlv~~g~~-----~~~~k~~~A~~~GA~gvi~~~  201 (701)
                      |..|+..-...|+.+=|..  .+|-..+.+ ....-+|+|+++..++.     +-+.....|.++|+.|+|+-.
T Consensus        25 ~~~~g~~~~~~G~a~TV~~--~~dn~~v~~~l~~~~~G~VlVid~~g~~~~a~~G~~~a~~a~~~G~~GiVidG   96 (156)
T d1nxja_          25 FRQFGGRSQFAGPISTVRC--FQDNALLKSVLSQPSAGGVLVIDGAGSLHTALVGDVIAELARSTGWTGLIVHG   96 (156)
T ss_dssp             CEECSSBSCEEEEEEEEEC--SSBCHHHHHHHHSCCSSCEEEEECTTCCSSEEECHHHHHHHHHHTCCEEEEEE
T ss_pred             ccCCCCCcEEEEEEEEEEE--eCChHHHHHHHhccCCCcEEEEECCCCccceeechHHHHHHHHcCCCEEECcc
Confidence            4556655567788876653  345333322 12345799999986542     224577899999999999863


No 47 
>d2hi6a1 c.8.2.3 (A:1-132) Hypothetical protein AF0055 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=22.33  E-value=34  Score=28.45  Aligned_cols=38  Identities=16%  Similarity=0.183  Sum_probs=24.1

Q ss_pred             CCcccceEEEEEeCC--CchhhHHHHHHHcC--CeEEEEEeCC
Q 005347          165 VVNVTGTVVLARYGQ--IFRGDIVHNAFEAG--AAGALIFTDR  203 (701)
Q Consensus       165 gv~v~GkIvlv~~g~--~~~~~k~~~A~~~G--A~gvi~~~dp  203 (701)
                      |..++|||.+++++.  +..+-....+...|  -+|+ ++++.
T Consensus        45 g~~~~gkILv~p~~~gSt~~~~vl~~~~~~g~aPaA~-I~~~~   86 (132)
T d2hi6a1          45 GESVAGRILVFPGGKGSTVGSYVLLNLRKNGVAPKAI-INKKT   86 (132)
T ss_dssp             TCBCTTSEEEESCCSCCSSCTTHHHHHHHHTCSCSEE-EESSC
T ss_pred             CccccCcEEEeecCCCCcchHHHHHHHHHcCCCcceE-EEEcC
Confidence            678999999999754  22334555666666  3444 44543


No 48 
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}
Probab=20.91  E-value=28  Score=31.98  Aligned_cols=39  Identities=18%  Similarity=0.181  Sum_probs=32.0

Q ss_pred             HHHHHhhcCCCCCCCHhhHHHHHHHHHHHHHCCCceeeeee
Q 005347           46 HHLHTLTRRPHVAGSEANAEAAAYVLSVFTSCSLESHIASY   86 (701)
Q Consensus        46 ~~l~~ls~~~r~aGs~g~~~~a~yi~~~~~~~Gl~~~~~~y   86 (701)
                      +.|+.|.+.+-.+|.  +.+.++|+.+.|+++|++++.+.+
T Consensus         4 ~ll~~l~~~~s~sg~--E~~~~~~~~~~l~~~~~~v~~D~~   42 (264)
T d1yloa2           4 SLLKALSEADAIASS--EQEVRQILLEEAARLQKEVRFDGL   42 (264)
T ss_dssp             HHHHHHHHSCCBTTB--CHHHHHHHHHHHHHTTCCEEECTT
T ss_pred             HHHHHHHcCCCCCcC--HHHHHHHHHHHHHhcCCEEEEcCC
Confidence            467888888878887  468899999999999999876643


Done!